Query 537021.9.peg.74_1
Match_columns 196
No_of_seqs 127 out of 733
Neff 6.2
Searched_HMMs 23785
Date Mon May 23 05:50:24 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_74.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1syy_A Ribonucleoside-diphosph 100.0 1.7E-44 0 311.7 20.3 187 7-194 3-190 (346)
2 1h0o_A Ribonucleoside-diphosph 100.0 5E-41 1.4E-45 288.9 18.0 165 15-194 64-231 (390)
3 1jk0_A RNR Y2, ribonucleoside- 100.0 1E-41 0 293.4 13.9 161 20-194 94-257 (419)
4 2o1z_A Ribonucleotide reductas 100.0 2.3E-39 9.7E-44 277.9 15.5 150 15-167 23-175 (311)
5 2rcc_A Ribonucleoside-diphosph 100.0 1.2E-38 5.1E-43 273.1 18.1 173 11-194 9-184 (346)
6 1mxr_A Ribonucleotide reductas 100.0 5.3E-38 2.2E-42 268.9 19.7 173 19-194 12-202 (375)
7 2p1i_A Ribonucleotide reductas 100.0 1.6E-39 6.9E-44 278.8 10.8 166 13-194 22-190 (349)
8 1jk0_B RNR Y4, ribonucleoside- 100.0 3.9E-39 1.6E-43 276.4 10.5 161 19-194 22-184 (345)
9 3n37_A Ribonucleoside-diphosph 100.0 1.1E-32 4.6E-37 233.9 18.2 135 31-168 8-144 (319)
10 3dhz_A Ribonucleotide reductas 100.0 2.6E-32 1.1E-36 231.3 17.7 134 31-167 18-153 (329)
11 3mjo_A Ribonucleotide reductas 100.0 3.5E-32 1.5E-36 230.5 17.7 133 32-167 18-152 (296)
12 3ee4_A Probable ribonucleoside 100.0 1.3E-28 5.3E-33 207.1 13.5 141 43-194 30-173 (323)
13 2inc_A Toluene, O-xylene monoo 95.8 0.11 4.5E-06 29.6 10.1 72 72-144 82-153 (491)
14 3ge3_A Toluene-4-monooxygenase 94.4 0.26 1.1E-05 27.0 9.5 69 73-142 84-152 (500)
15 1mty_D Methane monooxygenase h 89.7 1 4.2E-05 23.2 10.0 66 72-138 79-144 (512)
16 2v8t_A Manganese-containing ps 88.3 1.2 5.2E-05 22.6 6.4 72 50-139 129-200 (302)
17 1zpy_A Hypothetical protein NE 79.8 2.9 0.00012 20.2 10.3 75 72-149 11-85 (95)
18 1o9i_A Pseudocatalase; oxidore 79.8 2.9 0.00012 20.2 8.6 72 51-140 123-194 (266)
19 2fzf_A Hypothetical protein; s 68.5 5.5 0.00023 18.3 7.2 59 82-141 21-79 (175)
20 2e0z_A Virus-like particle; ba 63.2 1.2 5.2E-05 22.6 0.0 68 73-144 14-81 (345)
21 1za0_A Possible acyl-[acyl-car 57.8 8.5 0.00036 17.1 9.1 114 30-150 85-216 (275)
22 1vjx_A Putative ferritin-like 53.6 9.9 0.00042 16.6 6.8 58 82-141 15-72 (157)
23 3ez0_A Uncharacterized protein 51.7 11 0.00045 16.4 7.6 71 76-147 10-80 (225)
24 2inp_A Phenol hydroxylase comp 50.1 11 0.00047 16.2 8.6 84 73-157 82-169 (494)
25 2dc3_A Cytoglobin; myoglobin, 49.1 8.2 0.00035 17.1 2.3 80 59-140 7-97 (193)
26 2oh3_A Rubrerythrin, COG1633: 45.2 13 0.00056 15.8 7.9 43 100-142 111-153 (167)
27 2oc5_A Hypothetical protein; N 38.7 17 0.0007 15.1 8.5 73 62-142 20-92 (244)
28 2wy4_A Single domain haemoglob 38.3 17 0.00071 15.1 4.7 64 74-139 1-64 (140)
29 2o4d_A Hypothetical protein PA 36.1 18 0.00077 14.8 6.8 17 73-89 49-65 (165)
30 3g46_A Globin-1; oxygen transp 26.8 26 0.0011 13.8 4.0 65 73-139 9-81 (146)
31 1cqx_A Flavohemoprotein; globi 26.6 26 0.0011 13.8 1.9 42 74-117 2-43 (403)
32 3hlx_A Pyrroloquinoline-quinon 26.5 26 0.0011 13.8 11.0 79 59-145 27-111 (258)
33 3ge3_B Toluene-4-monooxygenase 25.3 28 0.0012 13.7 6.9 85 73-158 109-199 (327)
34 2vhb_A Hemoglobin; heme, respi 20.9 30 0.0013 13.4 1.3 64 74-139 2-65 (146)
No 1
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune evasion, replication; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 2ani_A
Probab=100.00 E-value=1.7e-44 Score=311.69 Aligned_cols=187 Identities=51% Similarity=0.914 Sum_probs=176.8
Q ss_pred HHHHHCCCCCCCCCCCCCCCCC-CCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 4666306766783202242776-682200876278999999999850498334673461685204014898999999999
Q 537021.9.peg.7 7 LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85 (196)
Q Consensus 7 ~~~i~~~~~~~~~~~~~ii~~~-~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~i 85 (196)
.|.+.++++++..++||||+|+ ++++||+||+|||+|++|++++++||+|+||||++|+.||++ ++||++||++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~PikYp~~~~~ykk~~~~fW~peEi~ls~D~~dw~~-~kL~~~er~~~~~~ 81 (346)
T 1syy_A 3 ADILDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKS-DRLSEDERRVILLN 81 (346)
T ss_dssp CSSGGGGGGSCCGGGCCSSSCCSSCTTCCCSCCCHHHHHHHHHHHHTCCCGGGSCCHHHHHHHHS-SCSCHHHHHHHHHH
T ss_pred CCHHCCCCCCCCCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHH-CCCCHHHHHHHHHH
T ss_conf 41310545456711040258998765550898777999999999976998311075123988865-89999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 99997763677777788887652868999999999999999999999999982376368999995099999999999999
Q 537021.9.peg.7 86 LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQY 165 (196)
Q Consensus 86 L~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~eif~~~~~~p~i~~K~~~~~k~ 165 (196)
|+||+++|++|+.++...+++.++.||+++++++|+++|+||++||+++++++++|++|+|+++.++|++++|++|+.++
T Consensus 82 l~~~~~~D~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~E~iHs~sYs~i~~~l~~d~~e~~~~~~~~~~i~~k~~~~~~~ 161 (346)
T 1syy_A 82 LGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEI 161 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTHHHHCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999898899830799899883809999999999999999999999999985688899999984059999999999986
Q ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 98530113344793348999999999963
Q 537021.9.peg.7 166 TQTLSSPSFHYWNKRRRSRILTRSLRFLC 194 (196)
Q Consensus 166 ~~~i~~~~~~~~~~e~~~~~l~~li~f~~ 194 (196)
++.+.++.......+..+.+++.+++|.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 1syy_A 162 TGKVLDPNFRTDSVEGLQEFVKNLVGYYI 190 (346)
T ss_dssp TSGGGSTTCCSSSHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 64100333110231008999999999999
No 2
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=100.00 E-value=5e-41 Score=288.85 Aligned_cols=165 Identities=28% Similarity=0.501 Sum_probs=150.3
Q ss_pred CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 66783202242776682200876278999999999850498334673461685204014898999999999999977636
Q 537021.9.peg.7 15 KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94 (196)
Q Consensus 15 ~~~~~~~~~ii~~~~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~ 94 (196)
.++++.+.+|++.++++.+|+||||||+|++|++++++||+|+||+|++|+.||++ ||++||++++++|+||+++|+
T Consensus 64 ~~~~~~~e~~l~en~~r~~l~PikY~~~~~~ykk~~~~fW~peEIdls~D~~dw~~---Lt~~Er~~i~~iL~~fa~~D~ 140 (390)
T 1h0o_A 64 TNPSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEA---LKPDERHFISHVLAFFAASDG 140 (390)
T ss_dssp -CCSCTTCTTTSSCCSCCCSSSCSCHHHHHHHHHHHHTCCCGGGSCCTTHHHHHHH---SCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHH
T ss_conf 78887767454689986345788588999999999976998011070644999974---999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH---HHHHHHCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 77777788887652868999999999999999999999999982376368---999995099999999999999985301
Q 537021.9.peg.7 95 LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171 (196)
Q Consensus 95 ~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e---if~~~~~~p~i~~K~~~~~k~~~~i~~ 171 (196)
+|++++...+++.++.||+++++++|++||+||+++||+|++++++|+.+ +|+++.+.|.+++|++|+.++...
T Consensus 141 iV~~~l~~~~~~~i~~pE~~~~~~~q~~~E~IHsesYs~il~tl~~d~~e~~~~~~~~~~~~~~~~k~~~~~~~~~~--- 217 (390)
T 1h0o_A 141 IVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGD--- 217 (390)
T ss_dssp HHHHHHHHTHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHTHHHHCHHHHHHHHHHHHHHHC---
T ss_pred HHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---
T ss_conf 99606798887757999999999999999999999999999972254889999999998718899999999975256---
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 13344793348999999999963
Q 537021.9.peg.7 172 PSFHYWNKRRRSRILTRSLRFLC 194 (196)
Q Consensus 172 ~~~~~~~~e~~~~~l~~li~f~~ 194 (196)
+ ...+.+++|+|+|
T Consensus 218 ~---------~~~~~~~lv~~~~ 231 (390)
T 1h0o_A 218 K---------EATYGERVVAFAA 231 (390)
T ss_dssp S---------SSCHHHHHHHHHH
T ss_pred C---------CHHHHHHHHHHHH
T ss_conf 4---------0049998889985
No 3
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=100.00 E-value=1e-41 Score=293.37 Aligned_cols=161 Identities=30% Similarity=0.566 Sum_probs=147.1
Q ss_pred CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 20224277668220087627899999999985049833467346168520401489899999999999997763677777
Q 537021.9.peg.7 20 DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99 (196)
Q Consensus 20 ~~~~ii~~~~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~n 99 (196)
.+.+|+..++++..|+||||||+|++|++++++||+|+||+|++|+.||++ +||++||++++++|+|||++|++|++|
T Consensus 94 ~~e~ll~en~~r~vlfPikY~~~~~lYkk~~a~FW~peEIdls~D~~Dw~~--~Lt~~Er~~i~~iLaffa~~DsiV~~n 171 (419)
T 1jk0_A 94 KEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNN--RMNENERFFISRVLAFFAASDGIVNEN 171 (419)
T ss_dssp GGCGGGSCCTTCCSCCSCSCHHHHHHHHHHHTTCCCGGGCCCTTHHHHHHH--TCCHHHHHHHHHHHHHHHTTSSHHHHH
T ss_pred CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 178665789886367074677999999999976999422173002999865--599999999999999999999999702
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH---HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 788887652868999999999999999999999999982376368---99999509999999999999998530113344
Q 537021.9.peg.7 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHY 176 (196)
Q Consensus 100 l~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e---if~~~~~~p~i~~K~~~~~k~~~~i~~~~~~~ 176 (196)
+...+++.++.||+++|+++|+++|+||+++||+|+++++.|++| +|+++.++|++++|++|+.+|.+.
T Consensus 172 l~~~~~~~v~~pE~~~~~~~q~~~E~IHsesYS~iietl~~d~~e~~~lf~~~~~~~~l~~Ka~~~~~~~~~-------- 243 (419)
T 1jk0_A 172 LVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQD-------- 243 (419)
T ss_dssp HCCCCCTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHTTS--------
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH--------
T ss_conf 899999867799999999999999999999999999855588888999999998777999888999987556--------
Q ss_pred CCHHHHHHHHHHHHHHHH
Q ss_conf 793348999999999963
Q 537021.9.peg.7 177 WNKRRRSRILTRSLRFLC 194 (196)
Q Consensus 177 ~~~e~~~~~l~~li~f~~ 194 (196)
....+...||+|+|
T Consensus 244 ----~~~~~~~~lva~~~ 257 (419)
T 1jk0_A 244 ----ADALFGERLVAFAS 257 (419)
T ss_dssp ----SSCCHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHH
T ss_conf ----78999999898772
No 4
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=100.00 E-value=2.3e-39 Score=277.88 Aligned_cols=150 Identities=28% Similarity=0.534 Sum_probs=141.2
Q ss_pred CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 66783202242776682200876278999999999850498334673461685204014898999999999999977636
Q 537021.9.peg.7 15 KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94 (196)
Q Consensus 15 ~~~~~~~~~ii~~~~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~ 94 (196)
.+..-++.+|+++++++.+++||+|||+|++|+++.++||+|+||+|++|++||++ ||++||++++++|+||+++|+
T Consensus 23 ~~~~~~~e~il~~n~~r~~~~PikYp~~~~ly~k~~~~fW~peEi~ls~D~~d~~~---Ls~~Ek~~~~~~L~~~~~~D~ 99 (311)
T 2o1z_A 23 QKSKEANEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEK---LNDNEKHFIKHVLAFFAASDG 99 (311)
T ss_dssp HHTTGGGCGGGSCCCSCCSSCSCSCHHHHHHHHHHHHTCCCGGGCCCHHHHHHHHH---SCHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH---CCHHHHHHHHHHHHHHHHHHH
T ss_conf 55432279776899985113798776999999999977999410677552788987---899999999999999999889
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH---HHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 77777788887652868999999999999999999999999982376368---99999509999999999999998
Q 537021.9.peg.7 95 LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQ 167 (196)
Q Consensus 95 ~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e---if~~~~~~p~i~~K~~~~~k~~~ 167 (196)
+|++++...+++.++.||+++++++|+++|+||++|||++++++++|+.+ +|+++.+.|.+++|+.|+.++.+
T Consensus 100 ~v~~~~~~~~~~~~~~pE~~~~~~~q~~~E~iH~~sYs~il~~l~~d~~~~~~~~~~~~~~~~l~~k~~~~~~~~~ 175 (311)
T 2o1z_A 100 IVLENLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDNYIKDEKERMNLFHAIENIPAVKNKALWAAKWIN 175 (311)
T ss_dssp -----CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHTTSHHHHHHHHHHHHHSS
T ss_pred HHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9970189999886680999999999999999999999999999635688888999998512999999999852033
No 5
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=1.2e-38 Score=273.11 Aligned_cols=173 Identities=18% Similarity=0.360 Sum_probs=153.4
Q ss_pred HCCCCCCCCCCCCCCCCC-CCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 306766783202242776-6822008762789999999998504983346734616852040148989999999999999
Q 537021.9.peg.7 11 QAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89 (196)
Q Consensus 11 ~~~~~~~~~~~~~ii~~~-~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ff 89 (196)
+.-.+.....+++|++|+ +++.++.|++|||+|++|++++++||+|+||+|++|+.||++ ||+.||++++++|+||
T Consensus 9 ~i~~~~~~n~~~~i~~g~~~~~~~~~~ikY~~~~~~y~k~~~~fW~peEi~ls~D~~dw~~---Lt~~Er~~~~~iL~~f 85 (346)
T 2rcc_A 9 KIYDTTASNASTGILNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPT---LTETEQEAFKKIIGLL 85 (346)
T ss_dssp CSCCTTSCSSCSCSBSCCCCSCCCTTSCSBTTHHHHHHHHHHTCCCGGGSCCHHHHHHGGG---SCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCHHHHHHHHHHHHHH
T ss_conf 6789999876688507997642324444768999999999877999423150410899987---9999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 77636777777888876528689999999999999999999999999823763--6899999509999999999999998
Q 537021.9.peg.7 90 ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQ 167 (196)
Q Consensus 90 s~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~--~eif~~~~~~p~i~~K~~~~~k~~~ 167 (196)
+++|++|++++ ..+.+.++.||+++++++|+++|+||+++||++++++++++ +++|+++.++|.+++|++|+.++++
T Consensus 86 ~~~D~~~~~~~-~~~~~~~~~~E~~~~~~~~~~~E~iH~~sYs~il~~l~~~~~~~e~~~~~~~~~~i~~k~~~~~~~~~ 164 (346)
T 2rcc_A 86 AFLDSVQTDYS-MRAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLVPKATQDEIFEYWKHDDVLKERNEFIIDGYE 164 (346)
T ss_dssp HHTTTTCCCHH-HHHHTTBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99887752458-99998656999999999999999999999999999864770179999999877999987789999987
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 530113344793348999999999963
Q 537021.9.peg.7 168 TLSSPSFHYWNKRRRSRILTRSLRFLC 194 (196)
Q Consensus 168 ~i~~~~~~~~~~e~~~~~l~~li~f~~ 194 (196)
...+.. ..+.+++++|+++|
T Consensus 165 ~~~~~~-------~~~~~~~~lv~~~~ 184 (346)
T 2rcc_A 165 KFVDNP-------TPKTFLESIVYDVI 184 (346)
T ss_dssp HHHHSC-------CHHHHHHHHHHHHH
T ss_pred HHHHCC-------CHHHHHHHHHHHHH
T ss_conf 551024-------57899999999999
No 6
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 1yfd_A 1piy_A 1r65_A 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A 1av8_A 1pfr_A ...
Probab=100.00 E-value=5.3e-38 Score=268.87 Aligned_cols=173 Identities=18% Similarity=0.223 Sum_probs=156.4
Q ss_pred CCCCCCCCCCC-CHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32022427766-82200876278999999999850498334673461685204014898999999999999977636777
Q 537021.9.peg.7 19 VDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97 (196)
Q Consensus 19 ~~~~~ii~~~~-~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~ 97 (196)
.-+++|+.|++ ++.++.|+||||+|++|++++++||+|+||+|++|++||++ ||++||++++++|++|+++|++|+
T Consensus 12 ~~~~~~~~g~~~~~~~~~~~kY~~~~~ly~~~~~~fW~peEi~~s~D~~dw~~---Lt~~Er~~~~~~l~~ft~~D~~v~ 88 (375)
T 1mxr_A 12 QLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLDSIQG 88 (375)
T ss_dssp TTSSCSBSSSCCCSCCCSCCSCHHHHHHHHHHHHTCCCGGGSCCTTHHHHHHT---SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 01156305898774227764567999999999857998202361532899977---999999999999999999999997
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC----
Q ss_conf 7778888765286899999999999999999999999998237636899999509999999999999998530113----
Q 537021.9.peg.7 98 NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS---- 173 (196)
Q Consensus 98 ~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~eif~~~~~~p~i~~K~~~~~k~~~~i~~~~---- 173 (196)
+++...+++.++.||+++++++|+++|+||+++|++++++++.|++++|+++.++|.+++|+.++.++++.+.+..
T Consensus 89 ~~~~~~~~~~~~~~E~~~~~~~q~~~E~iH~~sYs~il~~l~~d~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 168 (375)
T 1mxr_A 89 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWH 168 (375)
T ss_dssp HHHHHHTGGGBCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHCHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 56299885025888999999999999999999999999987278588999998537778889989999988877678988
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHH
Q ss_conf -------------344793348999999999963
Q 537021.9.peg.7 174 -------------FHYWNKRRRSRILTRSLRFLC 194 (196)
Q Consensus 174 -------------~~~~~~e~~~~~l~~li~f~~ 194 (196)
+.....+.+++++..+|+++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~ 202 (375)
T 1mxr_A 169 LLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 202 (375)
T ss_dssp HHCSEEEEETTEEEEECHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 6156653334643222202789999999999999
No 7
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, structural genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii str}
Probab=100.00 E-value=1.6e-39 Score=278.84 Aligned_cols=166 Identities=27% Similarity=0.476 Sum_probs=149.0
Q ss_pred CCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 67667832022427766822008762789999999998504983346734616852040148989999999999999776
Q 537021.9.peg.7 13 GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92 (196)
Q Consensus 13 ~~~~~~~~~~~ii~~~~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~ 92 (196)
..++...+.++|+++++++.+++||+|||+|++|++++++||+|+||+|++|++||++ ||+.||++++++|+||+++
T Consensus 22 ~~~~~~~~~~~il~~~~~r~~~~PikYp~~~~ly~k~~~~fW~peEi~ls~D~~dw~~---L~~~Ek~~~~~~L~~f~~~ 98 (349)
T 2p1i_A 22 DFQKSKESNEKILNKESNRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDLKDFEK---LNVNEKHFIKHVLAFFAAS 98 (349)
T ss_dssp -------------------------CCHHHHHHHHHHHTTCCCGGGTCGGGCSHHHHH---SCTTTHHHHHHHHHHHTTC
T ss_pred HHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCHHHHHHHHHHHHHHHHH
T ss_conf 1767630588555789996013698586999999999976999403174221788986---9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH---HHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 3677777788887652868999999999999999999999999982376368---9999950999999999999999853
Q 537021.9.peg.7 93 ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTL 169 (196)
Q Consensus 93 D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e---if~~~~~~p~i~~K~~~~~k~~~~i 169 (196)
|++|++++...+++.++.||+++++++|+++|+||+++||+|++++++|+++ +|+++.+.|++++|+.|+.++++.
T Consensus 99 D~~v~~~~~~~~~~~~~~~E~~~~~~~q~~~E~iH~~sYs~il~~l~~d~~e~~~~~~~~~~~~~l~~k~~~~~~~~~~- 177 (349)
T 2p1i_A 99 DGIVLENLASKFLREVEIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPAIKNKALWAAKWIND- 177 (349)
T ss_dssp -----CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHHHTTHHHHSCHHHHHHHHHHHHTSSC-
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
T ss_conf 9999842699998865709999999999999999999999999993457788999999996429889999998752100-
Q ss_pred HCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 0113344793348999999999963
Q 537021.9.peg.7 170 SSPSFHYWNKRRRSRILTRSLRFLC 194 (196)
Q Consensus 170 ~~~~~~~~~~e~~~~~l~~li~f~~ 194 (196)
...++..+|+++|
T Consensus 178 ------------~~~~~~~lv~~~~ 190 (349)
T 2p1i_A 178 ------------TNSFAERIVANAC 190 (349)
T ss_dssp ------------SSCHHHHHHHHHH
T ss_pred ------------CHHHHHHHHHHHH
T ss_conf ------------0479999999987
No 8
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=100.00 E-value=3.9e-39 Score=276.40 Aligned_cols=161 Identities=23% Similarity=0.378 Sum_probs=145.1
Q ss_pred CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32022427766822008762789999999998504983346734616852040148989999999999999776367777
Q 537021.9.peg.7 19 VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98 (196)
Q Consensus 19 ~~~~~ii~~~~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~ 98 (196)
.++.+++..++++.+++||+|||+|++|++++++||+|+||+|++|++||++ ||++||++++++|+||+++|++|++
T Consensus 22 ~~~e~~l~en~~r~~~~PikY~~~~~~ykk~~~~fW~peEi~ls~D~~d~~~---Ls~~Er~~~~~~L~~~~~~D~~v~~ 98 (345)
T 1jk0_B 22 EKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK---LTDDQKTYIGNLLALSISSDNLVNK 98 (345)
T ss_dssp TTTCTTTSCCTTCCSCCSCSCHHHHHHHHHHHHTCCCGGGCCCTTTSTTTTT---SCTTHHHHHHHHHHHHC--------
T ss_pred CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2368655689886243286787999999999976998201170644898986---9999999999999999999999998
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH--HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 7788887652868999999999999999999999999982376368--99999509999999999999998530113344
Q 537021.9.peg.7 99 NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQYTQTLSSPSFHY 176 (196)
Q Consensus 99 nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e--if~~~~~~p~i~~K~~~~~k~~~~i~~~~~~~ 176 (196)
++...+++.++.||+++++++|+++|+||++|||+|+++++.++++ +|+.+.+.|.+++|++|+.++.+.
T Consensus 99 ~~~~~~~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~~l~~d~~~~~~f~~~~~~~~~~~k~~~~~~~~~~-------- 170 (345)
T 1jk0_B 99 YLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKNIPLFKEIANLPEVKHKAAFIERWISN-------- 170 (345)
T ss_dssp -CHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTSCSGGGGCSCHHHHHHHHHHHHTTSS--------
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------
T ss_conf 789999987783999999999999999999999999998546746889999998439999998887751256--------
Q ss_pred CCHHHHHHHHHHHHHHHH
Q ss_conf 793348999999999963
Q 537021.9.peg.7 177 WNKRRRSRILTRSLRFLC 194 (196)
Q Consensus 177 ~~~e~~~~~l~~li~f~~ 194 (196)
....++.++++++|
T Consensus 171 ----~~~~~~~~li~~~~ 184 (345)
T 1jk0_B 171 ----DDSLYAERLVAFAA 184 (345)
T ss_dssp ----SSCCHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHH
T ss_conf ----37889999999873
No 9
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=100.00 E-value=1.1e-32 Score=233.88 Aligned_cols=135 Identities=19% Similarity=0.264 Sum_probs=127.9
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 22008762789999999998504983346734616852040148989999999999999776367777778888765286
Q 537021.9.peg.7 31 VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110 (196)
Q Consensus 31 ~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~ 110 (196)
-.++.-++|+|.+++|++++++||+|+||+|++|++||++ ||+.||++++++|+||+++|++|++++...+++.++.
T Consensus 8 ~inwn~~~~~~~~~ly~k~~~~fW~peEi~l~~D~~d~~~---L~~~er~~~~~~l~~~~~~D~~v~~~~~~~~~~~~~~ 84 (319)
T 3n37_A 8 AINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALT 84 (319)
T ss_dssp CCCTTSCSCHHHHHHHHHHHHTCCCGGGSCGGGGHHHHTT---SCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHGGGCSS
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
T ss_conf 4538788747899999999967999624384653999865---9999999999999999999999973549999876587
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--HHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999823763--68999995099999999999999985
Q 537021.9.peg.7 111 PECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQT 168 (196)
Q Consensus 111 pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~--~eif~~~~~~p~i~~K~~~~~k~~~~ 168 (196)
||+++++++|+++|+||+++||+++++++.++ +++|+.+.++|.+.+|++|+.++++.
T Consensus 85 pE~~~~l~~q~~~E~iHs~sYs~il~~l~~~~~~~~~~~~~~~~~~l~~k~~~~~~~~~~ 144 (319)
T 3n37_A 85 PHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRG 144 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999999999999999997436555789999998612877656787762145
No 10
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A 1uzr_A*
Probab=100.00 E-value=2.6e-32 Score=231.35 Aligned_cols=134 Identities=18% Similarity=0.292 Sum_probs=127.5
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 22008762789999999998504983346734616852040148989999999999999776367777778888765286
Q 537021.9.peg.7 31 VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110 (196)
Q Consensus 31 ~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~ 110 (196)
..++.-++|||+.++|+++++|||+|+||+|++|+.||++ ||+.||++++++|+||+++|++|++++...+++.++.
T Consensus 18 ~~nwn~~~~~~~~~ly~k~~~~fW~p~Ei~l~~D~~dw~~---Lt~~Er~~~~~~l~~~~~~D~~v~~~~~~~~~~~~~~ 94 (329)
T 3dhz_A 18 AINWNVIPDEKDLEVWDRLTGNFWLPEKIPVSNDIQSWNK---MTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDAET 94 (329)
T ss_dssp CCCTTSCSSHHHHHHHHHHHHTCCCGGGSCGGGGHHHHHT---SCHHHHHHHHHHHHHHHHHHHHHHHTHHHHTGGGCSS
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
T ss_conf 7677768768899999999967999766381654998876---9999999999999999999999981338877102577
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 899999999999999999999999998237636--899999509999999999999998
Q 537021.9.peg.7 111 PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQYTQ 167 (196)
Q Consensus 111 pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~--eif~~~~~~p~i~~K~~~~~k~~~ 167 (196)
||+++++++|+++|+||+++||+|+++++.+++ ++|+++.+.|.+++|++|+.++++
T Consensus 95 ~e~~~~~~~~~~~E~iHs~sYs~il~~l~~~~~~~~~f~~~~~~~~l~~k~~~~~~~~~ 153 (329)
T 3dhz_A 95 MHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRKAKIIMSYYN 153 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999999998714783589999988607387655789999864
No 11
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} PDB: 1uzr_A*
Probab=100.00 E-value=3.5e-32 Score=230.55 Aligned_cols=133 Identities=18% Similarity=0.294 Sum_probs=127.0
Q ss_pred HHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 20087627899999999985049833467346168520401489899999999999997763677777788887652868
Q 537021.9.peg.7 32 NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111 (196)
Q Consensus 32 ~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~p 111 (196)
.++.-++|||.+++|+++.++||+|+||||++|++||++ ||+.||++++++|+||+++|++|++++...+++.++.|
T Consensus 18 ~nwn~~~~~~~~~~~~k~~~~fW~p~Ei~l~~D~~dw~~---Lt~~E~~~~~~~l~~~~~~D~~v~~~~~~~~~~~~~~~ 94 (296)
T 3mjo_A 18 INWNVIPDEKDLEVWDRLTGNFWLPEKIPVSNDIQSWNK---MTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDAETM 94 (296)
T ss_dssp CCTTSCSCHHHHHHHHHHHHTCCCGGGSCGGGGHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHGGGCSSH
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCH
T ss_conf 678878868899999999967999742182744998866---99999999999999999999999841488770234769
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998237636--899999509999999999999998
Q 537021.9.peg.7 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQYTQ 167 (196)
Q Consensus 112 E~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~--eif~~~~~~p~i~~K~~~~~k~~~ 167 (196)
|+++++++|+++|+||+++||+++++++.+++ ++|+++.+.|.+++|++|+.++++
T Consensus 95 E~~~~~~~~~~~E~iH~eaYs~il~~l~~~~~~~~~f~~~~~~~~l~~k~~~i~~~~~ 152 (296)
T 3mjo_A 95 HEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRKAKIIMSYYN 152 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999998605885799999988537577777899998731
No 12
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, cavity, monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis}
Probab=99.96 E-value=1.3e-28 Score=207.08 Aligned_cols=141 Identities=23% Similarity=0.370 Sum_probs=121.5
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHCCCHHHHHHHHHH
Q ss_conf 999999985049833467346168520401489899999999999997763677777788--887652868999999999
Q 537021.9.peg.7 43 WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL--AIYRHLSNPECRQYLLRQ 120 (196)
Q Consensus 43 ~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~--~i~~~i~~pE~~~~~~~q 120 (196)
+.+|++++++||+|+||+|++|+.||++ ||++||++++++|+||+.+|++|++|+.. .+.+.++.||+++|++.|
T Consensus 30 ~~ly~k~~~~fW~p~Eidls~D~~dw~~---Ls~~Er~~~~~iL~~f~~~D~~v~~~l~~l~~~~~~~~~~e~~~~~~~q 106 (323)
T 3ee4_A 30 LKLFAGGNAKFWHPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEEAVTEDIQPFMSAMRAEGRLADEMYLTQF 106 (323)
T ss_dssp HHHHHHHHHTCCCGGGSCCTTHHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHCCCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 9999999873998352780734999987---9999999999999999999999995499999872005859999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHH-HHHHCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999823763689999950999999999999999-8530113344793348999999999963
Q 537021.9.peg.7 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYT-QTLSSPSFHYWNKRRRSRILTRSLRFLC 194 (196)
Q Consensus 121 ~~~E~iHs~sYs~il~tl~~d~~eif~~~~~~p~i~~K~~~~~k~~-~~i~~~~~~~~~~e~~~~~l~~li~f~~ 194 (196)
+++|+||+++||+++++++.++ ++|+.+.+.|.+++|..+...+. +.+.. ...++++++.+|+|.+
T Consensus 107 ~~~EaiH~esYs~il~tl~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~lv~~~~ 173 (323)
T 3ee4_A 107 AFEEAKHTQVFRMWLDAVGISE-DLHRYLDDLPAYRQIFYAELPECLNALSA-------DPSPAAQVRASVTYNH 173 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCS-CCGGGGTTCHHHHHHHHTHHHHHHHHHHH-------CCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHCC-------CCCHHHHHHHHHHHHH
T ss_conf 9999879999999999855498-88887520489999999999999987436-------9988999999999999
No 13
>2inc_A Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 2ind_A* 1t0q_A 1t0r_A 1t0s_A 2rdb_A*
Probab=95.76 E-value=0.11 Score=29.56 Aligned_cols=72 Identities=13% Similarity=0.051 Sum_probs=61.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 1489899999999999997763677777788887652868999999999999999999999999982376368
Q 537021.9.peg.7 72 NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144 (196)
Q Consensus 72 ~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e 144 (196)
+.+.+.=+..++..|+.+.-++-....+. ..+.+.++.+++|.++++|+..|..|++...++...++.+...
T Consensus 82 ~~~dprwve~Lk~~l~~~~~~Ey~A~~~~-A~l~r~ap~~~~Rnaaa~Q~lDElRHaQ~~~~l~~~~~~~~~~ 153 (491)
T 2inc_A 82 DRADPGWVSTMQLHFGAIALEEYAASTAE-ARMARFAKAPGNRNMATFGMMDENRHGQIQLYFPYANVKRSRK 153 (491)
T ss_dssp GTSCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGCGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 12898999999999841247999999999-9999867987899999999999999999999999987145777
No 14
>3ge3_A Toluene-4-monooxygenase system protein A; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} PDB: 3ge8_A 3dhi_A* 3dhh_A* 3dhg_A* 3i5j_A 3i63_A
Probab=94.41 E-value=0.26 Score=27.00 Aligned_cols=69 Identities=13% Similarity=0.056 Sum_probs=59.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 4898999999999999977636777777888876528689999999999999999999999999823763
Q 537021.9.peg.7 73 GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142 (196)
Q Consensus 73 ~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~ 142 (196)
.+.+.-+..++..|+.+.-++-....+. ..+.+..+.+++|.++++|+.-|..|++...+++..++...
T Consensus 84 ~~dprw~e~Lk~~l~~~~~~Ey~A~~~~-A~l~r~ap~~~~R~aaa~Q~~DElRHaQ~~~~l~~~~~~~~ 152 (500)
T 3ge3_A 84 NSDPGWISTLKSHYGAIAVGEYAAVTGE-GRMARFSKAPGNRNMATFGMMDELRHGQLQLFFPHEYCKKD 152 (500)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 3999999999999840328999999999-99998679888999999999999999999999999972336
No 15
>1mty_D Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1mmo_D 1xvb_A 1fyz_A 1fz0_A 1fz2_A 1fz3_A 1fz4_A 1fz5_A 1fz6_A 1fz7_A 1fz8_A 1fz9_A 1fzh_A 1fzi_A 1xmf_A 1xmg_A 1xmh_A 1xu3_A 1xu5_A 1fz1_A ...
Probab=89.67 E-value=1 Score=23.17 Aligned_cols=66 Identities=15% Similarity=0.139 Sum_probs=55.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1489899999999999997763677777788887652868999999999999999999999999982
Q 537021.9.peg.7 72 NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138 (196)
Q Consensus 72 ~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl 138 (196)
..+.+.-.++++..++.+..++-...... ..+.+.++.++++.++++|+.-|..|++..++....+
T Consensus 79 ~~~dprw~~~lk~~l~~~~~~Ey~A~~~~-A~l~r~~p~~~~rn~a~~Q~lDElRH~Q~~~~~~~~l 144 (512)
T 1mty_D 79 VRVHPKWNETMKVVSNFLEVGEYNAIAAT-GMLWDSAQAAEQKNGYLAQVLDEIRHTHQCAYVNYYF 144 (512)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 13897899999999712067999999999-9999758848789999998778999999999999999
No 16
>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A
Probab=88.28 E-value=1.2 Score=22.55 Aligned_cols=72 Identities=24% Similarity=0.319 Sum_probs=54.1
Q ss_pred HHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 85049833467346168520401489899999999999997763677777788887652868999999999999999999
Q 537021.9.peg.7 50 CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129 (196)
Q Consensus 50 ~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~ 129 (196)
..+-|+..=|.-+.|.. .+ +..++ .++ -.++.....++..+.+|.++.++++-+..|.+|..
T Consensus 129 ~G~pWt~~YV~~sGnl~---------aD----L~~Ni----aaE-~~Ar~~y~rl~~~tdDp~vkd~L~fLi~RE~~H~~ 190 (302)
T 2v8t_A 129 MGEHWNGEYVFTSGNLI---------LD----LLHNF----FLE-VAARTHKLRVYEMTDNPVAREMIGYLLVRGGVHAA 190 (302)
T ss_dssp TSCBCBGGGCCCCSCHH---------HH----HHHHH----HHH-HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHH---------HH----HHHHH----HHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89968676131589899---------99----99999----999-99999999999863881499999999997899999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999999823
Q 537021.9.peg.7 130 TFQYIITSLG 139 (196)
Q Consensus 130 sYs~il~tl~ 139 (196)
.|.-.|++|.
T Consensus 191 ~f~~ALe~l~ 200 (302)
T 2v8t_A 191 AYGKALESLT 200 (302)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999975
No 17
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} SCOP: a.25.1.5 PDB: 3k6c_A
Probab=79.84 E-value=2.9 Score=20.15 Aligned_cols=75 Identities=19% Similarity=0.140 Sum_probs=57.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 148989999999999999776367777778888765286899999999999999999999999998237636899999
Q 537021.9.peg.7 72 NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149 (196)
Q Consensus 72 ~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~eif~~~ 149 (196)
++|++.-|.+..-+.+.- .-+.+-|+.......+++|+++.++.-.+-+|-.|.-.+.-+|..+-+...+.+..|
T Consensus 11 e~L~~e~~d~~rai~sl~---~EleAI~~Y~Q~a~~~~d~e~k~vl~hi~~EEk~H~g~~lelLrr~dp~~~~~lk~y 85 (95)
T 1zpy_A 11 QELSDETRDMHRAIISLR---EELEAVDLYNQRVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRCDPAFDKELKDY 85 (95)
T ss_dssp GGSCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_conf 771987899999999999---999999999999986899999999999999999999999999998798999999998
No 18
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=79.83 E-value=2.9 Score=20.15 Aligned_cols=72 Identities=21% Similarity=0.198 Sum_probs=52.9
Q ss_pred HHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 50498334673461685204014898999999999999977636777777888876528689999999999999999999
Q 537021.9.peg.7 51 NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130 (196)
Q Consensus 51 ~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~s 130 (196)
.+-|+..-|.-+.|+. .+ +..++ .++ -.++-....++..+.+|.++.++.+-+..|.+|...
T Consensus 123 G~pWt~~yv~~sgdl~---------aD----L~~ni----aaE-~~Ar~~Y~rl~~~tdDp~vkd~L~fL~~RE~~H~~~ 184 (266)
T 1o9i_A 123 GAAWNAGYVTSSGNLV---------AD----MRFNV----VRE-SEARLQVSRLYSMTEDEGVRDMLKFLLARETQHQLQ 184 (266)
T ss_dssp CCBCBGGGCCCCSCHH---------HH----HHHHH----HHH-HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCHH---------HH----HHHHH----HHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9987777012078899---------99----99999----999-999999999998528922899999999976999999
Q ss_pred HHHHHHHHCC
Q ss_conf 9999998237
Q 537021.9.peg.7 131 FQYIITSLGL 140 (196)
Q Consensus 131 Ys~il~tl~~ 140 (196)
|.-.|+++..
T Consensus 185 f~~ALe~l~~ 194 (266)
T 1o9i_A 185 FMKAQEELEE 194 (266)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999742
No 19
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=68.45 E-value=5.5 Score=18.31 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999997763677777788887652868999999999999999999999999982376
Q 537021.9.peg.7 82 IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141 (196)
Q Consensus 82 ~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d 141 (196)
+..+|.+-...+ ..+.+....+...+++|+++..+...+-+|.-|.+.+..++..++.+
T Consensus 21 ~~e~L~~Ai~~E-~~a~~~Y~~~a~~~~~~~~k~~f~~la~eE~~H~~~l~~~~~~~~~~ 79 (175)
T 2fzf_A 21 LEELLGMAIKAE-IGAREFYKSLAEKIKIEALKEKINWLAEEEKKHEALLRKLYSQMFPG 79 (175)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHSCCCTTHHHHHHHHHHHTHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999989-99999999999887997899999999999999999999999973798
No 20
>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}
Probab=63.19 E-value=1.2 Score=22.58 Aligned_cols=68 Identities=25% Similarity=0.253 Sum_probs=56.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 489899999999999997763677777788887652868999999999999999999999999982376368
Q 537021.9.peg.7 73 GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144 (196)
Q Consensus 73 ~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e 144 (196)
+||..| +.+.|.+-..++ ....++...+...+.+++++..+.-.+-+|-.|+.-+..++..+.+++.+
T Consensus 14 ~~~~~e---~~~~lr~~i~~E-~eAi~~Y~~~a~~~~~~~~k~v~~~ia~eEk~H~~~f~~ll~~l~~~~~~ 81 (345)
T 2e0z_A 14 PYTKEE---LMEILRLAIIAE-LDAINLYEQMARYSEDENVRKILLDVAREEKAHVGEFMALLLNLDPEQVT 81 (345)
T ss_dssp ------------------------------------------------------------------------
T ss_pred CCCHHH---HHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 899899---999999999989-99999999999829978899999999989999999999999862988899
No 21
>1za0_A Possible acyl-[acyl-carrier protein] desaturase DESA2 (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle; 2.00A {Mycobacterium tuberculosis H37RV} SCOP: a.25.1.2
Probab=57.82 E-value=8.5 Score=17.05 Aligned_cols=114 Identities=16% Similarity=0.165 Sum_probs=62.2
Q ss_pred CHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC---CCHHHHHHH--------------HHHHHHHHHH
Q ss_conf 82200876278999999999850498334673461685204014---898999999--------------9999999776
Q 537021.9.peg.7 30 DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG---LTDDERLMI--------------KRNLGFFASS 92 (196)
Q Consensus 30 ~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~---Lt~~Er~~~--------------~~iL~ffs~~ 92 (196)
.++..++...+|. .| ...|++||.-=+.=..+|-.... ....|+... ...|.+-+.-
T Consensus 85 ~l~~~f~~d~~w~--~w----~~~WtaEE~RHg~aL~~YL~~sg~vDp~~le~~~~~~~~~g~~~~~~~p~~~l~y~~fq 158 (275)
T 1za0_A 85 ELVEHFILEDWWG--RW----LGRWTAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYRAEKYTQVETLVYMAFY 158 (275)
T ss_dssp ---------CHHH--HH----HHHHHHHHHHHHHHHHHHHHHHTCSCTTTTTCTTC----------CCCHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHH--HH----HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEE
T ss_conf 9999805640899--99----85265887568999999999956888688799999999716678987710043230000
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHH
Q ss_conf 36777777888876528689999999999999999999999999823-76368999995
Q 537021.9.peg.7 93 ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG-LDEGELFNMYR 150 (196)
Q Consensus 93 D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~-~d~~eif~~~~ 150 (196)
+....-. ..++.+....|-++..++..+.-|+.|...|+.+++.+. .+|++.-.++.
T Consensus 159 E~aT~i~-y~nla~~~gdPvL~~i~~rIA~DE~rH~~fy~~~v~~~le~dpd~~v~Ai~ 216 (275)
T 1za0_A 159 ERCGAVF-CRNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIA 216 (275)
T ss_dssp HHHHHHH-HHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 2479999-999998769959999999998889999999999999998659076999999
No 22
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein TM1526; structural genomics, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=53.57 E-value=9.9 Score=16.60 Aligned_cols=58 Identities=19% Similarity=0.209 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999997763677777788887652868999999999999999999999999982376
Q 537021.9.peg.7 82 IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141 (196)
Q Consensus 82 ~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d 141 (196)
++.+|......+....+ +...+...+ .|+++.++...+-+|.-|.+.+.-++..++.+
T Consensus 15 ~~e~l~~Ai~~E~~~~~-~Y~~~a~~~-~~~~~~~f~~la~eE~~H~~~l~~~~~~~~~~ 72 (157)
T 1vjx_A 15 VSDILTVAIRLEEEGER-FYRELSEHF-NGEIKKTFLELADQERIHAEIFRKMSDQENWD 72 (157)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHTTSC-CSHHHHHHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999-999999767-89999999999999999999999999861798
No 23
>3ez0_A Uncharacterized protein with ferritin-like fold; YP_832262.1, protein of unknown function with ferritin-like fold, structural genomics; HET: UNL TLA; 2.33A {Arthrobacter SP}
Probab=51.66 E-value=11 Score=16.41 Aligned_cols=71 Identities=17% Similarity=0.098 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 899999999999997763677777788887652868999999999999999999999999982376368999
Q 537021.9.peg.7 76 DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147 (196)
Q Consensus 76 ~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~eif~ 147 (196)
..-+..+...|+.++-++.....-+.. -..+-+..|-+.-++..+..|--|.+.+.-.+..+|-++.+...
T Consensus 10 ~~~~~~~~~ll~~lA~~el~~~~Rlae-~~~~AP~Le~~iala~~A~de~gh~~~l~~~l~~lg~d~~~~~~ 80 (225)
T 3ez0_A 10 ARYNRFVADLFGMMAYGELSAFERFSA-DARYSPTLHDRAVLGRIAVVEFRHYELVSARLEAMGIDAEDAML 80 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCSSSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 769999999999999999999999998-88639987889999999999999999999999986999678988
No 24
>2inp_A Phenol hydroxylase component PHN; DIIRON, four-helix bundle, regulatory protein, oxidoreductase; 2.30A {Pseudomonas stutzeri} PDB: 2inn_A
Probab=50.06 E-value=11 Score=16.24 Aligned_cols=84 Identities=18% Similarity=0.077 Sum_probs=61.0
Q ss_pred CCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHH
Q ss_conf 4898-999999999999977636777777888876528689999999999999999999999999823763---689999
Q 537021.9.peg.7 73 GLTD-DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE---GELFNM 148 (196)
Q Consensus 73 ~Lt~-~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~---~eif~~ 148 (196)
.|++ .=..+++..++.+..++-....+.. .+.+..+.++++.++.+|+.-|..|++.=++++.-+..+- ..-..+
T Consensus 82 ~lsdp~w~~~Lk~~l~~~~~~Ey~a~~~~a-~~~r~a~~~~irn~~~~qa~DelRhaQ~~~~~~~~~~~~~~g~~~~~~~ 160 (494)
T 2inp_A 82 NISDARYVNALKLFISGISPLEHAAFQGYS-KVGRQFSGAGARVACQMQAIDELRHSQTQQHAMSHYNKHFNGLHDGPHM 160 (494)
T ss_dssp GSSCGGGHHHHHHHHHHTHHHHHHHHHHHH-HHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCTTHHHH
T ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 379878999999997020389999999999-9987468889999999988899999999999998852146743167887
Q ss_pred HHCCHHHHH
Q ss_conf 950999999
Q 537021.9.peg.7 149 YREVPSITA 157 (196)
Q Consensus 149 ~~~~p~i~~ 157 (196)
+.++|...-
T Consensus 161 w~~~p~~q~ 169 (494)
T 2inp_A 161 HDRVWYLSV 169 (494)
T ss_dssp HTTSGGGHH
T ss_pred HCCCHHHHH
T ss_conf 334808887
No 25
>2dc3_A Cytoglobin; myoglobin, heme, oxygen transport, oxygen storage, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.68A {Homo sapiens} PDB: 1v5h_A* 1urv_A* 1umo_A* 1ury_A* 1ut0_A* 1ux9_A*
Probab=49.06 E-value=8.2 Score=17.14 Aligned_cols=80 Identities=14% Similarity=0.175 Sum_probs=47.4
Q ss_pred CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-----------HHHHH
Q ss_conf 6734616852040148989999999999999776367777778888765286899999999999-----------99999
Q 537021.9.peg.7 59 VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF-----------EEAVH 127 (196)
Q Consensus 59 I~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~-----------~E~iH 127 (196)
++=..++..+.....||+.||.+++.....+..--.-.+..+...+ +-..|+.+.+...+.. .=.-|
T Consensus 7 ~~~~~~~~~~~~~~~LT~~e~~~I~~SW~~v~~~~~~~G~~~f~rL--F~~~P~~k~~F~~f~~~~~~~~l~~s~~~~~H 84 (193)
T 2dc3_A 7 VPGEMEIERRERSEELSEAERKAVQAMWARLYANCEDVGVAILVRF--FVNFPSAKQYFSQFKHMEDPLEMERSPQLRKH 84 (193)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHH--HHHCGGGGGGCTTTTTCCCHHHHTTCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH--HHHCHHHHHHHHHCCCCCCHHHHHCCHHHHHH
T ss_conf 4787765445677999999999999999999758999999999999--99895699986211576768887259999999
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 9999999998237
Q 537021.9.peg.7 128 SHTFQYIITSLGL 140 (196)
Q Consensus 128 s~sYs~il~tl~~ 140 (196)
+......|+.++.
T Consensus 85 ~~~v~~~l~~~V~ 97 (193)
T 2dc3_A 85 ACRVMGALNTVVE 97 (193)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999998
No 26
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, structural genomics; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum ms-1} SCOP: a.25.1.8
Probab=45.15 E-value=13 Score=15.75 Aligned_cols=43 Identities=19% Similarity=0.084 Sum_probs=31.9
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 7888876528689999999999999999999999999823763
Q 537021.9.peg.7 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142 (196)
Q Consensus 100 l~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~ 142 (196)
....+...++.|+++.++...+-.|.-|...+.-+++.+..++
T Consensus 111 ~Y~~la~~~~d~~~~~~~~~l~~~E~~H~~~l~~~l~~~~~~~ 153 (167)
T 2oh3_A 111 YYKEAAANSADPEVKRLGADFAAEEAEHVVALDKWIEKTPRPS 153 (167)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9999998869999999999999999999999999998658999
No 27
>2oc5_A Hypothetical protein; NP_895059.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: UNL; 1.68A {Prochlorococcus marinus str} SCOP: a.25.1.6
Probab=38.68 E-value=17 Score=15.11 Aligned_cols=73 Identities=22% Similarity=0.194 Sum_probs=57.4
Q ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 46168520401489899999999999997763677777788887652868999999999999999999999999982376
Q 537021.9.peg.7 62 QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141 (196)
Q Consensus 62 ~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d 141 (196)
+....|| -|+.-|+.|.+|=+--..++....+|+. .+... .|+-+-=+.+-+-||+.|...|.-+=.+|+..
T Consensus 20 ~~~lpDf-----~s~~YkdAYSRINaIVIEGEqeA~dNyi-~l~~l--lP~~~dEL~rLakME~rH~kgF~aCGrNL~V~ 91 (244)
T 2oc5_A 20 SEALPDF-----TSDRYKDAYSRINAIVIEGEQEAHDNYI-AIGTL--LPDHVEELKRLAKMEMRHKKGFTACGKNLGVE 91 (244)
T ss_dssp -CCCCCT-----TSHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH--CGGGHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCC-----CCHHHHHHHHHHHEEEEECHHHHHHHHH-HHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 6678774-----5088899998740256745087898699-99987--85248999999999998876888863378688
Q ss_pred H
Q ss_conf 3
Q 537021.9.peg.7 142 E 142 (196)
Q Consensus 142 ~ 142 (196)
+
T Consensus 92 ~ 92 (244)
T 2oc5_A 92 A 92 (244)
T ss_dssp C
T ss_pred C
T ss_conf 7
No 28
>2wy4_A Single domain haemoglobin; heme, transport, oxygen transport; HET: HEM; 1.35A {Campylobacter jejuni}
Probab=38.26 E-value=17 Score=15.07 Aligned_cols=64 Identities=11% Similarity=0.162 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 898999999999999977636777777888876528689999999999999999999999999823
Q 537021.9.peg.7 74 LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139 (196)
Q Consensus 74 Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~ 139 (196)
||++|+.+++....-+...-.-++.-+...+. -..|+.+.+.....-.-.-|.......+..++
T Consensus 1 Lt~~q~~li~~sw~~l~~~~~~~~~~fy~~LF--~~~P~~k~~F~~~~~~~~~~~~~~~~~l~~~v 64 (140)
T 2wy4_A 1 MTKEQIQIIKDCVPILQKNGEDLTNEFYKIMF--NDYPEVKPMFNMEKQISGEQPKALAMAILMAA 64 (140)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCGGGGGGSCHHHHHTSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999899998658999999999999--88978887568654413888999999999999
No 29
>2o4d_A Hypothetical protein PA0269; unknown function; 1.85A {Pseudomonas aeruginosa} SCOP: a.152.1.3 PDB: 2ijc_A
Probab=36.05 E-value=18 Score=14.84 Aligned_cols=17 Identities=12% Similarity=0.020 Sum_probs=9.7
Q ss_pred CCCHHHHHHHHHHHHHH
Q ss_conf 48989999999999999
Q 537021.9.peg.7 73 GLTDDERLMIKRNLGFF 89 (196)
Q Consensus 73 ~Lt~~Er~~~~~iL~ff 89 (196)
.|++.+|+++.-..+..
T Consensus 49 ~L~~~~~Elv~l~vs~~ 65 (165)
T 2o4d_A 49 GLERPLIELVYLRTSQI 65 (165)
T ss_dssp SSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
T ss_conf 99999999999999999
No 30
>3g46_A Globin-1; oxygen transport, allostery, oxygen affinity, cytoplasm, heme, iron, metal-binding, oxygen storage/transport, oxygen binding; HET: HEM; 0.91A {Scapharca inaequivalvis} PDB: 1nxf_A* 3g4q_A* 3g4r_A* 3g4u_A* 3g4v_A* 3g4w_A* 3g4y_A* 3g52_A* 3g53_A* 2auo_A* 2aup_A* 3sdh_A* 1nwi_A* 1nwn_A* 1hbi_A* 4sdh_A* 7hbi_A* 6hbi_A* 2av0_A* 2av3_A* ...
Probab=26.76 E-value=26 Score=13.84 Aligned_cols=65 Identities=18% Similarity=0.192 Sum_probs=37.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHC
Q ss_conf 489899999999999997763677777788887652868999999999999--------9999999999999823
Q 537021.9.peg.7 73 GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE--------EAVHSHTFQYIITSLG 139 (196)
Q Consensus 73 ~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~--------E~iHs~sYs~il~tl~ 139 (196)
.||++||..++...+.+..--.-.+..+...+. ..+|+.+.+.....-. =.-|+..+...++.++
T Consensus 9 ~Lt~~q~~~v~~sW~~v~~~~~~~g~~if~~lF--~~~P~~~~~F~~~~~~~~l~~~~~~~~ha~~v~~~l~~~v 81 (146)
T 3g46_A 9 QLTADVKKDLRDSWKVIGSDKKGNGVALMTTLF--ADNQETIGYFKRLGDVSQGMANDKLRGHSITLMYALQNFI 81 (146)
T ss_dssp TCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHH--HHCGGGGGGGGGGCCGGGGGGCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH--HHCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 699999999999999998258889999999999--9898899987623571401058899999999999899999
No 31
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix- flanked five-stranded parallel beta sheet; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=26.57 E-value=26 Score=13.81 Aligned_cols=42 Identities=14% Similarity=0.242 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 89899999999999997763677777788887652868999999
Q 537021.9.peg.7 74 LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117 (196)
Q Consensus 74 Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~ 117 (196)
||+.+|.+++....-+...-.-.+..+...+. -..||.+.+.
T Consensus 2 lt~~~k~li~~sw~~~~~~~~~~~~~fy~rlF--~~~P~~~~~F 43 (403)
T 1cqx_A 2 LTQKTKDIVKATAPVLAEHGYDIIKCFYQRMF--EAHPELKNVF 43 (403)
T ss_dssp CCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH--HHCGGGGGTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCHHHHHHC
T ss_conf 69799999999999999709999999999998--8693557667
No 32
>3hlx_A Pyrroloquinoline-quinone synthase; PQQC, PQQ biosynthesis, oxidase, complex, all helical, oxido; HET: PQQ; 1.30A {Klebsiella pneumoniae subsp} PDB: 3hml_A* 1otv_A 3hnh_A* 1otw_A*
Probab=26.49 E-value=26 Score=13.80 Aligned_cols=79 Identities=11% Similarity=0.135 Sum_probs=46.1
Q ss_pred CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH------HHHHHHH
Q ss_conf 6734616852040148989999999999999776367777778888765286899999999999999------9999999
Q 537021.9.peg.7 59 VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA------VHSHTFQ 132 (196)
Q Consensus 59 I~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~------iHs~sYs 132 (196)
-+|-. .|.. ++||.++-..+-..--+ .=....+.+. .+...++.|++|..+..-...|. -|.+-|-
T Consensus 27 HPF~~---~~~~-G~lt~~~l~~~a~q~y~---~v~~fpr~la-ai~s~~~d~~~r~~ll~nl~eeeg~~~~~~H~el~l 98 (258)
T 3hlx_A 27 HPYHI---AMHN-GNATREQIQGWVANRFY---YQTTIPLKDA-AIMANCPDAQTRRKWVQRILDHDGSHGEDGGIEAWL 98 (258)
T ss_dssp SHHHH---HHHT-TCCCHHHHHHHHHHHHH---HHHHHHHHHH-HHHHTCCCHHHHHHHHHHHHHHHCSSSSCHHHHHHH
T ss_pred CCHHH---HHHC-CCCCHHHHHHHHHHHHH---HHHHHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf 80999---9857-99999999999998899---9999999999-999809988999999999998847677874799999
Q ss_pred HHHHHHCCCHHHH
Q ss_conf 9999823763689
Q 537021.9.peg.7 133 YIITSLGLDEGEL 145 (196)
Q Consensus 133 ~il~tl~~d~~ei 145 (196)
-.++++|.+++++
T Consensus 99 ~f~~alG~~~~~v 111 (258)
T 3hlx_A 99 RLGEAVGLSRDDL 111 (258)
T ss_dssp HHHHHTTCCHHHH
T ss_pred HHHHHCCCCHHHH
T ss_conf 9999809998883
No 33
>3ge3_B Toluene-4-monooxygenase system protein E; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} PDB: 3ge8_B 3i5j_B 3i63_B 3dhi_B* 3dhh_B* 3dhg_B*
Probab=25.33 E-value=28 Score=13.67 Aligned_cols=85 Identities=8% Similarity=0.007 Sum_probs=54.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCHH---HHH
Q ss_conf 4898999999999999977636777777888876528689999999999999999999999999823---7636---899
Q 537021.9.peg.7 73 GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG---LDEG---ELF 146 (196)
Q Consensus 73 ~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~---~d~~---eif 146 (196)
.|++.=+.+++..++-+.-.+--.+.+. ..+.+....+.++..+.+|++-|-.|++--++.+..|. .+.. .--
T Consensus 109 ~l~~~w~~~l~~~l~p~r~~E~ga~~~~-a~~~r~~~~~~i~~~~~~qa~DelR~aQ~~a~~~~~L~~~~~~~~~~~~~k 187 (327)
T 3ge3_B 109 MVREGWEHTMARCYSPLRYLFHCLQMSS-AYVQQMAPASTISNCCILQTADSLRWLTHTAYRTHELSLTYPDAGLGEHER 187 (327)
T ss_dssp GSCTTHHHHHHHHTTTHHHHHHHHHHHH-HHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCTTTSHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 1899999999999751678999999998-999985686899999999988898999999999999997589975127899
Q ss_pred HHHHCCHHHHHH
Q ss_conf 999509999999
Q 537021.9.peg.7 147 NMYREVPSITAK 158 (196)
Q Consensus 147 ~~~~~~p~i~~K 158 (196)
..+.++|.-+--
T Consensus 188 ~~W~~dp~wQ~~ 199 (327)
T 3ge3_B 188 ELWEKEPGWQGL 199 (327)
T ss_dssp HHHHHCHHHHHH
T ss_pred HHHCCCCHHHHH
T ss_conf 987028457889
No 34
>2vhb_A Hemoglobin; heme, respiratory protein, oxygen transport; HET: HEM; 1.76A {Vitreoscilla stercoraria} SCOP: a.1.1.2 PDB: 1vhb_A* 3vhb_A* 4vhb_A*
Probab=20.95 E-value=30 Score=13.45 Aligned_cols=64 Identities=11% Similarity=0.176 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 898999999999999977636777777888876528689999999999999999999999999823
Q 537021.9.peg.7 74 LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139 (196)
Q Consensus 74 Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~ 139 (196)
||+.+...++.....+.....-.+......+. -..|+++.+.....-...-|+......+.+++
T Consensus 2 l~~~~i~lv~~sw~~l~~~~~~i~~~fy~rLF--~~~P~~~~lF~~~~~~~~~~~~~~~~~l~~~v 65 (146)
T 2vhb_A 2 LDQQTINIIKATVPVLKEHGVTITTTFYKNLF--AKHPEVRPLFDMGRQESLEQPKALAMTVLAAA 65 (146)
T ss_dssp CCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH--HHCGGGGGGC--------CCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 59999999999899998768999999999999--88979997607255766899999999999998
Done!