Query 537021.9.peg.74_1
Match_columns 196
No_of_seqs 127 out of 733
Neff 6.2
Searched_HMMs 13730
Date Mon May 23 08:29:03 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_74.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1syya_ a.25.1.2 (A:) Ribonucl 100.0 4.2E-45 0 314.5 20.3 186 8-194 3-189 (317)
2 d1jk0a_ a.25.1.2 (A:) Ribonucl 100.0 1.6E-41 1.4E-45 290.5 13.9 161 20-194 49-212 (334)
3 d1mxra_ a.25.1.2 (A:) Ribonucl 100.0 3.8E-39 2.8E-43 274.9 19.9 173 19-194 12-202 (339)
4 d1jk0b_ a.25.1.2 (B:) Ribonucl 100.0 8.6E-40 6.3E-44 279.1 10.5 161 19-194 12-174 (285)
5 d1w68a_ a.25.1.2 (A:) Ribonucl 100.0 8E-37 5.8E-41 259.6 17.4 145 20-167 2-149 (281)
6 d1r2fa_ a.25.1.2 (A:) Ribonucl 100.0 1.2E-33 8.9E-38 238.6 17.8 134 32-168 4-139 (283)
7 d3dhza1 a.25.1.2 (A:14-297) Ri 100.0 1.9E-33 1.4E-37 237.3 17.8 135 30-167 4-140 (284)
8 d2inca1 a.25.1.2 (A:2-492) Tol 94.0 0.18 1.3E-05 26.4 9.9 70 73-143 83-152 (491)
9 d1mtyd_ a.25.1.2 (D:) Methane 90.3 0.51 3.7E-05 23.5 10.2 66 72-138 79-144 (512)
10 d1jkva_ a.25.1.3 (A:) Manganes 85.0 1.1 7.8E-05 21.4 8.6 73 51-141 123-195 (266)
11 d2fzfa1 a.25.1.1 (A:10-167) Hy 83.3 1.3 9.1E-05 21.0 7.2 58 84-142 14-71 (158)
12 d1zpya1 a.25.1.5 (A:4-94) Hypo 78.8 1.8 0.00013 19.9 10.5 75 72-149 8-82 (91)
13 d2cwla1 a.25.1.3 (A:1-299) Man 77.7 1.9 0.00014 19.7 8.6 72 50-139 129-200 (299)
14 d1za0a1 a.25.1.2 (A:8-274) Pos 57.6 4.9 0.00036 17.0 9.1 115 30-151 78-210 (267)
15 d1cqxa1 a.1.1.2 (A:1-150) Flav 40.5 6.6 0.00048 16.2 1.9 63 74-138 2-64 (150)
16 d2itba1 a.25.1.7 (A:3-201) Put 31.9 12 0.0009 14.4 7.8 63 75-141 104-166 (199)
17 d1h97a_ a.1.1.2 (A:) Trematode 26.6 12 0.00086 14.5 1.4 66 73-140 1-79 (147)
18 d1j30a_ a.25.1.1 (A:) Hypothet 25.9 16 0.0011 13.7 6.4 48 95-142 19-69 (141)
19 d1d8ua_ a.1.1.2 (A:) Non-symbi 23.7 17 0.0012 13.5 1.9 66 72-139 11-85 (165)
20 d2oh3a1 a.25.1.8 (A:3-154) Unc 23.7 17 0.0012 13.5 8.8 37 103-139 111-147 (152)
21 d1mtyb_ a.25.1.2 (B:) Methane 20.4 20 0.0014 13.0 6.3 67 73-140 130-197 (384)
22 d2incb1 a.25.1.2 (B:8-329) Tol 20.4 20 0.0014 13.0 8.4 85 72-157 104-194 (322)
23 d1mhyb_ a.25.1.2 (B:) Methane 20.0 20 0.0015 13.0 8.3 84 72-156 127-218 (383)
No 1
>d1syya_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Chlamydia trachomatis [TaxId: 813]}
Probab=100.00 E-value=4.2e-45 Score=314.49 Aligned_cols=186 Identities=51% Similarity=0.921 Sum_probs=177.6
Q ss_pred HHHHCCCCCCCCCCCCCCCCC-CCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 666306766783202242776-6822008762789999999998504983346734616852040148989999999999
Q 537021.9.peg.7 8 SPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86 (196)
Q Consensus 8 ~~i~~~~~~~~~~~~~ii~~~-~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL 86 (196)
|-+.++..|++.++||||||+ ++++||+||||||+|++|++++++||+|+||+|++|+.||++ ++||+.||++++++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~kYp~~~~~yk~~~~~fW~peEi~ls~D~~dw~~-~kL~~~e~~~~~~~l 81 (317)
T d1syya_ 3 DILDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKS-DRLSEDERRVILLNL 81 (317)
T ss_dssp SSGGGGGGSCCGGGCCSSSCCSSCTTCCCSCCCHHHHHHHHHHHHTCCCGGGSCCHHHHHHHHS-SCSCHHHHHHHHHHH
T ss_pred CHHHCCCCCCCCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH-CCCCHHHHHHHHHHH
T ss_conf 1321534456711140268998765551898777999999999976999510574013888865-889989999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 99977636777777888876528689999999999999999999999999823763689999950999999999999999
Q 537021.9.peg.7 87 GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYT 166 (196)
Q Consensus 87 ~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~eif~~~~~~p~i~~K~~~~~k~~ 166 (196)
+||+.+|++|++++...+++.++.||+++++++|+++|+||++|||+++++++.|++|+|+++.++|.+++|++|+.+++
T Consensus 82 ~~~~~~d~~v~~~~~~~l~~~i~~pE~~~~~~~q~~~E~iH~~sYs~il~~l~~d~~e~~~~~~~~~~i~~k~~~~~~~~ 161 (317)
T d1syya_ 82 GFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEIT 161 (317)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTHHHHCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99988866875405764012378599999999999998789999999999856778999999842999999999999977
Q ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8530113344793348999999999963
Q 537021.9.peg.7 167 QTLSSPSFHYWNKRRRSRILTRSLRFLC 194 (196)
Q Consensus 167 ~~i~~~~~~~~~~e~~~~~l~~li~f~~ 194 (196)
..+.+++......+..+.++.++++++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (317)
T d1syya_ 162 GKVLDPNFRTDSVEGLQEFVKNLVGYYI 189 (317)
T ss_dssp SGGGSTTCCSSSHHHHHHHHHHHHHHHT
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 5311434344644339999999999999
No 2
>d1jk0a_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Baker's yeast (Saccharomyces cerevisiae), Y2 [TaxId: 4932]}
Probab=100.00 E-value=1.6e-41 Score=290.50 Aligned_cols=161 Identities=30% Similarity=0.565 Sum_probs=146.2
Q ss_pred CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 20224277668220087627899999999985049833467346168520401489899999999999997763677777
Q 537021.9.peg.7 20 DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99 (196)
Q Consensus 20 ~~~~ii~~~~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~n 99 (196)
.+.+|+..++++.+++||||||+|++|++++++||+|+||||++|+.||++ +||+.||++++++|+||+++|++|+++
T Consensus 49 ~~e~~l~~~~~r~~~~PikY~~~~~~Ykk~~~~fW~peEIdls~D~~dw~~--~Lt~~Er~~i~~il~ffa~~D~~v~~~ 126 (334)
T d1jk0a_ 49 KEEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNN--RMNENERFFISRVLAFFAASDGIVNEN 126 (334)
T ss_dssp GGCGGGSCCTTCCSCCSCSCHHHHHHHHHHHTTCCCGGGCCCTTHHHHHHH--TCCHHHHHHHHHHHHHHHTTSSHHHHH
T ss_pred CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 389666799885467487677999999999876999102468688899866--599999999999999987664798747
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH---HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 788887652868999999999999999999999999982376368---99999509999999999999998530113344
Q 537021.9.peg.7 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHY 176 (196)
Q Consensus 100 l~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e---if~~~~~~p~i~~K~~~~~k~~~~i~~~~~~~ 176 (196)
+...+++.++.||+++++++|+++|+||++|||++++++++|+.+ +|+++.++|++++|++|+.+|.+..
T Consensus 127 l~~~~~~~v~~pE~~~~~~~q~~~E~IHsesYS~ii~tl~~d~~e~~~lf~~~~~~~~i~~k~~~~~~~~~~~------- 199 (334)
T d1jk0a_ 127 LVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQDA------- 199 (334)
T ss_dssp HCCCCCTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSS-------
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-------
T ss_conf 8875657845188999999999999999999999999751445679999999987778999889998761145-------
Q ss_pred CCHHHHHHHHHHHHHHHH
Q ss_conf 793348999999999963
Q 537021.9.peg.7 177 WNKRRRSRILTRSLRFLC 194 (196)
Q Consensus 177 ~~~e~~~~~l~~li~f~~ 194 (196)
...+.+.+++|+|
T Consensus 200 -----~~~~~~~lva~~~ 212 (334)
T d1jk0a_ 200 -----DALFGERLVAFAS 212 (334)
T ss_dssp -----SCCHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHH
T ss_conf -----5799999999999
No 3
>d1mxra_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=3.8e-39 Score=274.86 Aligned_cols=173 Identities=18% Similarity=0.220 Sum_probs=158.3
Q ss_pred CCCCCCCCCC-CCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3202242776-682200876278999999999850498334673461685204014898999999999999977636777
Q 537021.9.peg.7 19 VDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97 (196)
Q Consensus 19 ~~~~~ii~~~-~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~ 97 (196)
.-+++++.|+ +++.++.|+||||+|++|++++++||+|+||+|++|+.||++ ||++||++++++|+||+++|++|+
T Consensus 12 ~~~~~~~~g~~~~~~~~~~~ky~~~~~ly~~~~~~fW~p~Ei~ls~D~~dw~~---L~~~Ek~~~~~~l~~f~~~D~~v~ 88 (339)
T d1mxra_ 12 QLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLDSIQG 88 (339)
T ss_dssp TTSSCSBSSSCCCSCCCSCCSCHHHHHHHHHHHHTCCCGGGSCCTTHHHHHHT---SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 00056205998774327755667999999999867999623062200899987---899999999999999998558785
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC-----
Q ss_conf 777888876528689999999999999999999999999823763689999950999999999999999853011-----
Q 537021.9.peg.7 98 NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSP----- 172 (196)
Q Consensus 98 ~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~eif~~~~~~p~i~~K~~~~~k~~~~i~~~----- 172 (196)
+++...+++.++.||+++++++|+++|+||++|||+++++++.|++++|+++.++|.+++|+.++.++++.+.+.
T Consensus 89 ~~~~~~~~~~~~~pE~~~~~~~q~~~E~iH~~sYs~il~~l~~d~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 168 (339)
T d1mxra_ 89 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWH 168 (339)
T ss_dssp HHHHHHTGGGBCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHCHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 25099998753889999999999999999999999999998156488999998567777789999999888876678888
Q ss_pred ------------CCCCCCHHHHHHHHHHHHHHHH
Q ss_conf ------------3344793348999999999963
Q 537021.9.peg.7 173 ------------SFHYWNKRRRSRILTRSLRFLC 194 (196)
Q Consensus 173 ------------~~~~~~~e~~~~~l~~li~f~~ 194 (196)
.+...+.+.++.++..+++++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (339)
T d1mxra_ 169 LLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNA 202 (339)
T ss_dssp HHCSEEEEETTEEEEECHHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 6155641345653221115789999999999999
No 4
>d1jk0b_ a.25.1.2 (B:) Ribonucleotide reductase R2 {Baker's yeast (Saccharomyces cerevisiae), Y4 [TaxId: 4932]}
Probab=100.00 E-value=8.6e-40 Score=279.13 Aligned_cols=161 Identities=23% Similarity=0.378 Sum_probs=144.5
Q ss_pred CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32022427766822008762789999999998504983346734616852040148989999999999999776367777
Q 537021.9.peg.7 19 VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98 (196)
Q Consensus 19 ~~~~~ii~~~~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~ 98 (196)
-++..++..++++.+|+||||||+|++|+++++|||+|+||+|++|++||++ ||+.||++++++|+||+++|++|++
T Consensus 12 ~~~e~~l~e~~~r~~l~Piky~~~~~~y~~~~~~fW~peEi~l~~D~~d~~~---Lt~~Ek~~~~~~l~~f~~~D~~v~~ 88 (285)
T d1jk0b_ 12 EKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK---LTDDQKTYIGNLLALSISSDNLVNK 88 (285)
T ss_dssp TTTCTTTSCCTTCCSCCSCSCHHHHHHHHHHHHTCCCGGGCCCTTTSTTTTT---SCTTHHHHHHHHHHHHC--------
T ss_pred CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1278766789986356687687999999999976998300370621898986---9999999999999999998633654
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH--HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 7788887652868999999999999999999999999982376368--99999509999999999999998530113344
Q 537021.9.peg.7 99 NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQYTQTLSSPSFHY 176 (196)
Q Consensus 99 nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e--if~~~~~~p~i~~K~~~~~k~~~~i~~~~~~~ 176 (196)
++...+++.++.||+++++++|+++|+||++|||+++++++.++++ +|+++.+.|.+++|++|+.++.+.
T Consensus 89 ~~~~~i~~~~~~pE~~~~~~~q~~~E~iHs~sYs~il~~l~~~~e~~~~f~~~~~~~~~~~k~~~~~~~~~~-------- 160 (285)
T d1jk0b_ 89 YLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKNIPLFKEIANLPEVKHKAAFIERWISN-------- 160 (285)
T ss_dssp -CHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTSCSGGGGCSCHHHHHHHHHHHHTTSS--------
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCC--------
T ss_conf 327666564044799999999999997999999999999656758889999886258899776666631143--------
Q ss_pred CCHHHHHHHHHHHHHHHH
Q ss_conf 793348999999999963
Q 537021.9.peg.7 177 WNKRRRSRILTRSLRFLC 194 (196)
Q Consensus 177 ~~~e~~~~~l~~li~f~~ 194 (196)
....+..++++|+|
T Consensus 161 ----~~~~~~~~~i~~~~ 174 (285)
T d1jk0b_ 161 ----DDSLYAERLVAFAA 174 (285)
T ss_dssp ----SSCCHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHH
T ss_conf ----31679999999998
No 5
>d1w68a_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=8e-37 Score=259.56 Aligned_cols=145 Identities=30% Similarity=0.548 Sum_probs=136.8
Q ss_pred CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 20224277668220087627899999999985049833467346168520401489899999999999997763677777
Q 537021.9.peg.7 20 DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99 (196)
Q Consensus 20 ~~~~ii~~~~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~n 99 (196)
.+.++++.+.++.+++|++|||+|++|++++++||+|+||+|++|++||++ ||+.||++++++|+||+++|++|+++
T Consensus 2 ~~e~~l~~~~~r~~~~PikY~~~~~~y~~~~~~fW~peEi~ls~D~~dw~~---L~~~Er~~~~~~l~~~~~~D~~v~~~ 78 (281)
T d1w68a_ 2 EDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEA---LKPDERHFISHVLAFFAASDGIVNEN 78 (281)
T ss_dssp TTCTTTSCCGGGGCCCSCSCHHHHHHHHHHHHTCCCGGGSCCGGGHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 988677789996455077677999999999876998131460611999985---99999999999999998356677643
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH---HHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 788887652868999999999999999999999999982376368---99999509999999999999998
Q 537021.9.peg.7 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQ 167 (196)
Q Consensus 100 l~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e---if~~~~~~p~i~~K~~~~~k~~~ 167 (196)
+...+.+.++.||+++++++|+++|+||++|||+++++++.|+.+ +++.+.+.|.+.+|+.++..+..
T Consensus 79 ~~~~~~~~~~~~e~~~~~~~~~~~E~iH~~sYs~il~t~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (281)
T d1w68a_ 79 LVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIG 149 (281)
T ss_dssp HHHTHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHTGGGTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 56533266066999999999999998878899999998603324578889999965999999999986510
No 6
>d1r2fa_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Salmonella typhimurium [TaxId: 90371]}
Probab=100.00 E-value=1.2e-33 Score=238.55 Aligned_cols=134 Identities=19% Similarity=0.303 Sum_probs=127.0
Q ss_pred HHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 20087627899999999985049833467346168520401489899999999999997763677777788887652868
Q 537021.9.peg.7 32 NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111 (196)
Q Consensus 32 ~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~p 111 (196)
.++.-++|+|++++|++++++||+|+||+|++|+.||++ ||+.||++++++|+||+++|++|++++...+++.++.|
T Consensus 4 ~nwn~~~d~~~~~~y~k~~~~fW~peEi~l~~D~~dw~~---Lt~~Er~~~~~~l~~~~~~D~~v~~~~~~~~~~~~~~~ 80 (283)
T d1r2fa_ 4 INWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITP 80 (283)
T ss_dssp CCTTSCSCHHHHHHHHHHHHTCCCGGGSCGGGGHHHHHT---SCHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCSSH
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCH
T ss_conf 567888858899999999967999735282744998852---99999999999999999999999753344132301568
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998237636--8999995099999999999999985
Q 537021.9.peg.7 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQYTQT 168 (196)
Q Consensus 112 E~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~--eif~~~~~~p~i~~K~~~~~k~~~~ 168 (196)
|+++|+++|+++|+||+++||+++++++.+++ ++|+++.+.|++++|++|+.+++..
T Consensus 81 E~~~~~~~q~~~E~iH~~~Ys~il~~l~~~~e~~~~~~~~~~~~~l~~k~~~~~~~~~~ 139 (283)
T d1r2fa_ 81 HEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYVS 139 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999998889999999998742444789999986168999988999888501
No 7
>d3dhza1 a.25.1.2 (A:14-297) Ribonucleotide reductase R2 {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=100.00 E-value=1.9e-33 Score=237.28 Aligned_cols=135 Identities=18% Similarity=0.291 Sum_probs=128.6
Q ss_pred CHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 82200876278999999999850498334673461685204014898999999999999977636777777888876528
Q 537021.9.peg.7 30 DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109 (196)
Q Consensus 30 ~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~ 109 (196)
...++.-++|+|++++|++++++||+|+||+|++|++||++ ||++||++++++|+||+++|++|++++...+++.++
T Consensus 4 ~~~nwn~~~~~~~~~~y~k~~~~fW~peEi~l~~D~~d~~~---Lt~~Ek~~~~~~l~~~~~~D~~v~~~~~~~~~~~~~ 80 (284)
T d3dhza1 4 KAINWNVIPDEKDLEVWDRLTGNFWLPEKIPVSNDIQSWNK---MTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDAE 80 (284)
T ss_dssp CCCCTTSCSSHHHHHHHHHHHHTCCCGGGSCGGGGHHHHHT---SCHHHHHHHHHHHHHHHHHHHHHHHTHHHHTGGGCS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 67688888868899999999967999634084732999987---999999999999999999999998147221024447
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH--HHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 6899999999999999999999999998237636--899999509999999999999998
Q 537021.9.peg.7 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQYTQ 167 (196)
Q Consensus 110 ~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~--eif~~~~~~p~i~~K~~~~~k~~~ 167 (196)
.||+++|+++|+++|+||+++||+++++++.+++ ++|+++.+.|.+++|++|+.++++
T Consensus 81 ~~E~~~~~~~q~~~E~iH~~sYs~i~~~~~~~~~~~~~~~~~~~~~~i~~k~~~~~~~~~ 140 (284)
T d3dhza1 81 TMHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRKAKIIMSYYN 140 (284)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 789999999999999888999999998723675789999999877888877789999863
No 8
>d2inca1 a.25.1.2 (A:2-492) Toluene, o-xylene monooxygenase oxygenase subunit TouA {Pseudomonas stutzeri [TaxId: 316]}
Probab=93.98 E-value=0.18 Score=26.44 Aligned_cols=70 Identities=13% Similarity=0.036 Sum_probs=59.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 48989999999999999776367777778888765286899999999999999999999999998237636
Q 537021.9.peg.7 73 GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143 (196)
Q Consensus 73 ~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~ 143 (196)
.+.+.=++.++..|+.+.-++-....+. ..+.+..+.++++.++++|+..|..|++...++...++.+..
T Consensus 83 ~~dprw~~~Lk~~Ls~i~~~Ey~A~~~~-A~l~r~ap~~~~r~aaa~Q~lDElRHaQ~~~~l~~~~~~~~~ 152 (491)
T d2inca1 83 RADPGWVSTMQLHFGAIALEEYAASTAE-ARMARFAKAPGNRNMATFGMMDENRHGQIQLYFPYANVKRSR 152 (491)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGCG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 1798999999999851437999999999-999987788779999999988999999999999876402577
No 9
>d1mtyd_ a.25.1.2 (D:) Methane monooxygenase hydrolase alpha subunit {Methylococcus capsulatus [TaxId: 414]}
Probab=90.32 E-value=0.51 Score=23.51 Aligned_cols=66 Identities=15% Similarity=0.139 Sum_probs=52.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1489899999999999997763677777788887652868999999999999999999999999982
Q 537021.9.peg.7 72 NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138 (196)
Q Consensus 72 ~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl 138 (196)
..+.+.-.++++..|+.|.-++--..... ..+.+..+.++++.++++|++-|..|++..++...-+
T Consensus 79 ~~~d~~wl~~lk~~ls~~~hgE~gA~l~~-A~l~r~apt~~ak~~aa~Qt~DE~RH~q~~a~~~~~l 144 (512)
T d1mtyd_ 79 VRVHPKWNETMKVVSNFLEVGEYNAIAAT-GMLWDSAQAAEQKNGYLAQVLDEIRHTHQCAYVNYYF 144 (512)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 02797899999998545477999999999-9998757758899999998768999999999999999
No 10
>d1jkva_ a.25.1.3 (A:) Manganese catalase (T-catalase) {Lactobacillus plantarum [TaxId: 1590]}
Probab=84.99 E-value=1.1 Score=21.41 Aligned_cols=73 Identities=21% Similarity=0.198 Sum_probs=54.1
Q ss_pred HHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 50498334673461685204014898999999999999977636777777888876528689999999999999999999
Q 537021.9.peg.7 51 NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130 (196)
Q Consensus 51 ~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~s 130 (196)
.+-|++.-|.-+.|+. .+ +..++ .++ ..++.....++..+.+|.++.++.+-+..|.+|...
T Consensus 123 G~pWt~~Yv~~~Gnl~---------~D----L~~Ni----aAE-~~Ar~~Y~rl~~~tdDp~vk~~L~fL~~rE~~H~~~ 184 (266)
T d1jkva_ 123 GAAWNAGYVTSSGNLV---------AD----MRFNV----VRE-SEARLQVSRLYSMTEDEGVRDMLKFLLARETQHQLQ 184 (266)
T ss_dssp CCBCBGGGCCCCSCHH---------HH----HHHHH----HHH-HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHH---------HH----HHHHH----HHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9978743005688889---------99----99989----999-999999999998449865999999999998999999
Q ss_pred HHHHHHHHCCC
Q ss_conf 99999982376
Q 537021.9.peg.7 131 FQYIITSLGLD 141 (196)
Q Consensus 131 Ys~il~tl~~d 141 (196)
|.-.|++|..+
T Consensus 185 f~~aLe~l~~~ 195 (266)
T d1jkva_ 185 FMKAQEELEEK 195 (266)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHCCC
T ss_conf 99999984311
No 11
>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=83.32 E-value=1.3 Score=20.95 Aligned_cols=58 Identities=14% Similarity=0.125 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 99999977636777777888876528689999999999999999999999999823763
Q 537021.9.peg.7 84 RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142 (196)
Q Consensus 84 ~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~ 142 (196)
.+|......+ ..+.++...+...++.|+++..+...+-+|.-|.+....+++.++.++
T Consensus 14 e~l~~ai~~E-~~a~~~Y~~~a~~~~~~~~~~~f~~la~eE~~H~~~~~~~~~~~~~~~ 71 (158)
T d2fzfa1 14 ELLGMAIKAE-IGAREFYKSLAEKIKIEALKEKINWLAEEEKKHEALLRKLYSQMFPGK 71 (158)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHSCCCTTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999999-999999999997789966999999999999999999999999827996
No 12
>d1zpya1 a.25.1.5 (A:4-94) Hypothetical protein NE0167 {Nitrosomonas europaea [TaxId: 915]}
Probab=78.81 E-value=1.8 Score=19.95 Aligned_cols=75 Identities=17% Similarity=0.124 Sum_probs=58.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 148989999999999999776367777778888765286899999999999999999999999998237636899999
Q 537021.9.peg.7 72 NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149 (196)
Q Consensus 72 ~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~eif~~~ 149 (196)
++||+.-+.+..-+.+.-+ -+.+-|+.......+++|+++.++.-.+-+|-.|.-.+--+|..+-+...+.+..|
T Consensus 8 e~Ls~e~~d~~Rai~sli~---EleAI~~Y~q~a~~t~d~~~k~Vl~hia~EEkeH~g~~LelLrr~Dp~~~~~l~~y 82 (91)
T d1zpya1 8 QELSDETRDMHRAIISLRE---ELEAVDLYNQRVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRCDPAFDKELKDY 82 (91)
T ss_dssp GGSCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_conf 6739878999999999999---99999999999985799999999999888999999999999998798999999997
No 13
>d2cwla1 a.25.1.3 (A:1-299) Manganese catalase (T-catalase) {Thermus thermophilus [TaxId: 274]}
Probab=77.66 E-value=1.9 Score=19.73 Aligned_cols=72 Identities=24% Similarity=0.319 Sum_probs=53.9
Q ss_pred HHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 85049833467346168520401489899999999999997763677777788887652868999999999999999999
Q 537021.9.peg.7 50 CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129 (196)
Q Consensus 50 ~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~ 129 (196)
..+-|+..-|.-+.|.. .+ +..++ .++ ..++-....++..+.+|.++.++.+-+..|.+|..
T Consensus 129 ~G~pWt~~Yv~~sGnl~---------aD----L~~Ni----~aE-~~Ar~~y~rl~~~tdDp~vkd~L~fLi~RE~~H~~ 190 (299)
T d2cwla1 129 MGEHWNGEYVFTSGNLI---------LD----LLHNF----FLE-VAARTHKLRVYEMTDNPVAREMIGYLLVRGGVHAA 190 (299)
T ss_dssp TSCBCBGGGCCCCSCHH---------HH----HHHHH----HHH-HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCHH---------HH----HHHHH----HHH-HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 89958754207789999---------99----99999----999-99999999999853892189999999998899999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999999823
Q 537021.9.peg.7 130 TFQYIITSLG 139 (196)
Q Consensus 130 sYs~il~tl~ 139 (196)
.|.-.|+++.
T Consensus 191 ~f~~ALe~l~ 200 (299)
T d2cwla1 191 AYGKALESLT 200 (299)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999975
No 14
>d1za0a1 a.25.1.2 (A:8-274) Possible acyl-[acyl-carrier protein] desaturase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=57.60 E-value=4.9 Score=17.03 Aligned_cols=115 Identities=16% Similarity=0.163 Sum_probs=65.6
Q ss_pred CHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC---CCHHHHHHH--------------HHHHHHHHHH
Q ss_conf 82200876278999999999850498334673461685204014---898999999--------------9999999776
Q 537021.9.peg.7 30 DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG---LTDDERLMI--------------KRNLGFFASS 92 (196)
Q Consensus 30 ~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~---Lt~~Er~~~--------------~~iL~ffs~~ 92 (196)
.++..++...+|. .| ...|++||.-=+.=..+|-.... ....|+... ...+.+-+.-
T Consensus 78 ~l~~~f~~d~~w~--~w----v~~WtaEEnrHg~aL~~YL~lsg~vDp~~~e~~~~~~~~~G~~~~~~~p~~~l~y~~fq 151 (267)
T d1za0a1 78 ELVEHFILEDWWG--RW----LGRWTAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYRAEKYTQVETLVYMAFY 151 (267)
T ss_dssp ---------CHHH--HH----HHHHHHHHHHHHHHHHHHHHHHTCSCTTTTTCTTC----------CCCHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHH--HH----HHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 9999805552899--99----85155887558999999999951689157699999999853688987667899999998
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHC
Q ss_conf 36777777888876528689999999999999999999999999823-763689999950
Q 537021.9.peg.7 93 ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG-LDEGELFNMYRE 151 (196)
Q Consensus 93 D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~-~d~~eif~~~~~ 151 (196)
+....-. ..++.+....|-++.+++..+.-|+.|...|..+++.+. .+|++.-.++..
T Consensus 152 E~aT~i~-h~nla~~~~dPvL~~i~~rIA~DE~rH~~fy~~~v~~~le~dpd~~~~Ai~~ 210 (267)
T d1za0a1 152 ERCGAVF-CRNLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAA 210 (267)
T ss_dssp HHHHHHH-HHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 7689999-9999987389799999999988899999999999999987592879999999
No 15
>d1cqxa1 a.1.1.2 (A:1-150) Flavohemoglobin, N-terminal domain {Alcaligenes eutrophus [TaxId: 106590]}
Probab=40.54 E-value=6.6 Score=16.20 Aligned_cols=63 Identities=11% Similarity=0.166 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89899999999999997763677777788887652868999999999999999999999999982
Q 537021.9.peg.7 74 LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138 (196)
Q Consensus 74 Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl 138 (196)
||..||.+++.....+..--.-.+..+...+. -..|+++.+.....-...-|+......+.++
T Consensus 2 Ls~~q~~lik~sw~~~~~~~~~~~~~ff~rlF--~~~P~~~~~F~~~~~~~~~h~~~~~~~l~~~ 64 (150)
T d1cqxa1 2 LTQKTKDIVKATAPVLAEHGYDIIKCFYQRMF--EAHPELKNVFNMAHQEQGQQQQALARAVYAY 64 (150)
T ss_dssp CCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH--HHCGGGGGTSCCSCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 59899999999999999749999999999999--8898589886562065579999999999999
No 16
>d2itba1 a.25.1.7 (A:3-201) Putative tRNA-(Ms(2)io(6)a)-hydroxylase PP2188 {Pseudomonas putida [TaxId: 303]}
Probab=31.88 E-value=12 Score=14.41 Aligned_cols=63 Identities=17% Similarity=0.251 Sum_probs=41.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9899999999999997763677777788887652868999999999999999999999999982376
Q 537021.9.peg.7 75 TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141 (196)
Q Consensus 75 t~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d 141 (196)
.+.++-+=.-+++.+.-+= -.+-.. .+.+++ .+|.+.||...+-.|+.|-..|-.+-..++..
T Consensus 104 ~~~~~llD~Llv~AlIEAR--ScERF~-lLa~~l-d~eL~~FY~~L~~SEarH~~~yl~LA~~~~~~ 166 (199)
T d2itba1 104 HEPVKLVDTLVVGAFIEAR--SCERFA-ALVPHL-DEELGRFYHGLLKSEARHYQGYLKLAHNYGDE 166 (199)
T ss_dssp STTHHHHHHHHHHHHHHHH--HHHHHH-HHGGGS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCHHHHHHHHHHHHHHHHH--HHHHHH-HHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 9838999999999998600--876899-888637-79999999999999999999999999997887
No 17
>d1h97a_ a.1.1.2 (A:) Trematode hemoglobin/myoglobin {Paramphistomum epiclitum [TaxId: 54403]}
Probab=26.62 E-value=12 Score=14.52 Aligned_cols=66 Identities=15% Similarity=0.145 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHCCCHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHC
Q ss_conf 489899999999999997763677---7777888876528689999999999----------999999999999999823
Q 537021.9.peg.7 73 GLTDDERLMIKRNLGFFASSESLV---ANNIVLAIYRHLSNPECRQYLLRQA----------FEEAVHSHTFQYIITSLG 139 (196)
Q Consensus 73 ~Lt~~Er~~~~~iL~ffs~~D~~v---~~nl~~~i~~~i~~pE~~~~~~~q~----------~~E~iHs~sYs~il~tl~ 139 (196)
.||+.||+++.+.+.-+...+.-. +..+...+. -..|+.+.+...+. -.=.-|+..+...++.++
T Consensus 1 ~lt~~e~~l~~k~~~~~~~~~~~~~e~G~~if~~lF--~~~P~~~~~F~~~~~~~~~~l~~~~~~~~ha~~v~~~l~~~v 78 (147)
T d1h97a_ 1 TLTKHEQDILLKELGPHVDTPAHIVETGLGAYHALF--TAHPQYISHFSRLEGHTIENVMQSEGIKHYARTLTEAIVHML 78 (147)
T ss_dssp CCCHHHHHHHHHHHGGGTSSHHHHHHHHHHHHHHHH--HHCGGGGGGSGGGTTCCTTTGGGSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH--HHCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 988999999999988761607239999999999999--989888976013045557766049989999999999999999
Q ss_pred C
Q ss_conf 7
Q 537021.9.peg.7 140 L 140 (196)
Q Consensus 140 ~ 140 (196)
.
T Consensus 79 ~ 79 (147)
T d1h97a_ 79 K 79 (147)
T ss_dssp T
T ss_pred H
T ss_conf 8
No 18
>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=25.91 E-value=16 Score=13.73 Aligned_cols=48 Identities=25% Similarity=0.225 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 7777778888765286---89999999999999999999999999823763
Q 537021.9.peg.7 95 LVANNIVLAIYRHLSN---PECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142 (196)
Q Consensus 95 ~v~~nl~~~i~~~i~~---pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~ 142 (196)
.++.+....+...+.. |++..++..++.+|..|+......|..+|..|
T Consensus 19 ~~A~~~Y~~~a~~a~~~g~~~iA~~f~~~A~eE~~HA~~~~~~i~~lg~~p 69 (141)
T d1j30a_ 19 SMANRRYLYFAKRADEEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTD 69 (141)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999999999987788198999999999999999999999997378999
No 19
>d1d8ua_ a.1.1.2 (A:) Non-symbiotic plant hemoglobin {Rice (Oryza sativa) [TaxId: 4530]}
Probab=23.67 E-value=17 Score=13.46 Aligned_cols=66 Identities=9% Similarity=0.173 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHC
Q ss_conf 148989999999999999776367777778888765286899999999999---------99999999999999823
Q 537021.9.peg.7 72 NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF---------EEAVHSHTFQYIITSLG 139 (196)
Q Consensus 72 ~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~---------~E~iHs~sYs~il~tl~ 139 (196)
..||+.||.+++....-+..--.-.+..+...+. -..|+++.+..+... .=.-|+......++.++
T Consensus 11 ~~lt~~q~~lIr~SW~~v~~~~~~~g~~~f~~lF--~~~P~~k~~F~~~~~~~~~l~~~~~~~~H~~~v~~~l~~~i 85 (165)
T d1d8ua_ 11 VSFSEEQEALVLKSWAILKKDSANIALRFFLKIF--EVAPSASQMFSFLRNSDVPLEKNPKLKTHAMSVFVMTCEAA 85 (165)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH--HHCHHHHTTTCCSSSCCCSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 8889999999999999998458999999999999--98955898712047872443028788999999999999999
No 20
>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}
Probab=23.66 E-value=17 Score=13.46 Aligned_cols=37 Identities=22% Similarity=0.157 Sum_probs=17.2
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 8876528689999999999999999999999999823
Q 537021.9.peg.7 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139 (196)
Q Consensus 103 ~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~ 139 (196)
.+...+..|+++..+...+-.|..|.....-+++.+.
T Consensus 111 ~~a~~~~d~~~r~~~~~l~~~E~~H~~~l~~~l~~~~ 147 (152)
T d2oh3a1 111 EAAANSADPEVKRLGADFAAEEAEHVVALDKWIEKTP 147 (152)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9998868999999999999999999999999987147
No 21
>d1mtyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylococcus capsulatus [TaxId: 414]}
Probab=20.41 E-value=20 Score=13.04 Aligned_cols=67 Identities=19% Similarity=0.053 Sum_probs=51.7
Q ss_pred CCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 4898999-9999999999776367777778888765286899999999999999999999999998237
Q 537021.9.peg.7 73 GLTDDER-LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140 (196)
Q Consensus 73 ~Lt~~Er-~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~ 140 (196)
.|++.-+ .+++..|+-+.-++--.+.+.. .+.+....+.++.+..+|++-|-.|++.-++.+.-|++
T Consensus 130 ~l~~~w~~~~L~~~l~p~r~~E~ga~~~~a-~i~r~~~g~~i~~a~~fqa~DeLR~aQ~i~~~~~~L~~ 197 (384)
T d1mtyb_ 130 AMNPTWRDEFINRYWGAFLFNEYGLFNAHS-QGAREALSDVTRVSLAFWGFDKIDIAQMIQLERGFLAK 197 (384)
T ss_dssp GSCHHHHHTTTTTHHHHHHHHHHHHHHTTH-HHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 199999999999986024079999998789-99864686899999999876688899999999999987
No 22
>d2incb1 a.25.1.2 (B:8-329) Toluene, o-xylene monooxygenase oxygenase subunit TouE {Pseudomonas stutzeri [TaxId: 316]}
Probab=20.40 E-value=20 Score=13.04 Aligned_cols=85 Identities=11% Similarity=-0.046 Sum_probs=63.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CH---HHH
Q ss_conf 148989999999999999776367777778888765286899999999999999999999999998237---63---689
Q 537021.9.peg.7 72 NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL---DE---GEL 145 (196)
Q Consensus 72 ~~Lt~~Er~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~---d~---~ei 145 (196)
..|++.=+.+++..|+-+.-.+--.+.+.. .+.+....+.++.+..+|++-|-.|++-.+++...|.. |. +.-
T Consensus 104 ~~l~~~w~~~l~~~l~p~r~~E~ga~~~~a-~~~r~~~~~~i~~~~~~qa~D~lR~aQ~~~~~~~~L~~~~~d~~~~~~~ 182 (322)
T d2incb1 104 QMLTREWVETLARFYTPARYLFHALQMGSV-YIHQIAPASTITNCATYETADHLRWLTHTAYRTRELANCYPDVGFGKRE 182 (322)
T ss_dssp GGSCHHHHHHHHHHTTTHHHHHHHHHHHHH-HHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCTTTSH
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
T ss_conf 009999999999987304189999988689-9986567499999999998888899999999999987308996530789
Q ss_pred HHHHHCCHHHHH
Q ss_conf 999950999999
Q 537021.9.peg.7 146 FNMYREVPSITA 157 (196)
Q Consensus 146 f~~~~~~p~i~~ 157 (196)
-..+.++|.-+-
T Consensus 183 k~~W~~dp~WQ~ 194 (322)
T d2incb1 183 RDVWENDPAWQG 194 (322)
T ss_dssp HHHHHHCHHHHH
T ss_pred HHHHHHCCCHHH
T ss_conf 999970960488
No 23
>d1mhyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylosinus trichosporium [TaxId: 426]}
Probab=20.02 E-value=20 Score=12.98 Aligned_cols=84 Identities=14% Similarity=0.095 Sum_probs=62.1
Q ss_pred CCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CH--H
Q ss_conf 14898999-9999999999776367777778888765286899999999999999999999999998237-----63--6
Q 537021.9.peg.7 72 NGLTDDER-LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL-----DE--G 143 (196)
Q Consensus 72 ~~Lt~~Er-~~~~~iL~ffs~~D~~v~~nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~-----d~--~ 143 (196)
..|++.-+ .+++..|+-+.-.+--.+.+.. .+.++...+.++.+..+|++-|..|++.-+++.-.|.. +. +
T Consensus 127 ~~l~p~w~~~~L~~~l~p~r~~E~ga~m~~a-~i~r~a~~~~i~n~~~fqa~DeLR~aQ~l~~~~~~L~~~~~gf~~~~~ 205 (383)
T d1mhyb_ 127 RTIDPYWRDEILNKYFGALLYSEYGLFNAHS-SVGRDCLSDTIRQTAVFAALDKVDNAQMIQMERLFIAKLVPGFDASTD 205 (383)
T ss_dssp GGSCHHHHHTTHHHHHHHHHHHHHHHHHHHH-HHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSH
T ss_pred CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 0089999999999986131089999998889-998646758999999999887888999999999998774689870568
Q ss_pred HHHHHHHCCHHHH
Q ss_conf 8999995099999
Q 537021.9.peg.7 144 ELFNMYREVPSIT 156 (196)
Q Consensus 144 eif~~~~~~p~i~ 156 (196)
+-=..+.++|.-+
T Consensus 206 ~~k~~W~~dp~WQ 218 (383)
T d1mhyb_ 206 VPKKIWTTDPIYS 218 (383)
T ss_dssp HHHHHHHHCGGGH
T ss_pred HHHHHHHCCHHHH
T ss_conf 9988984488689
Done!