BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 537021.9.peg.74_1 (196 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >537021.9.peg.74_1 Length = 196 Score = 411 bits (1056), Expect = e-117, Method: Compositional matrix adjust. Identities = 196/196 (100%), Positives = 196/196 (100%) Query: 1 MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60 MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP Sbjct: 1 MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60 Query: 61 MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120 MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ Sbjct: 61 MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120 Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR Sbjct: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180 Query: 181 RRSRILTRSLRFLCRV 196 RRSRILTRSLRFLCRV Sbjct: 181 RRSRILTRSLRFLCRV 196 >gi|254780964|ref|YP_003065377.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 352 Score = 366 bits (940), Expect = e-103, Method: Compositional matrix adjust. Identities = 174/174 (100%), Positives = 174/174 (100%) Query: 1 MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60 MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP Sbjct: 1 MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60 Query: 61 MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120 MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ Sbjct: 61 MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120 Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF Sbjct: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174 >gi|254780845|ref|YP_003065258.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 352 Score = 366 bits (940), Expect = e-103, Method: Compositional matrix adjust. Identities = 174/174 (100%), Positives = 174/174 (100%) Query: 1 MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60 MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP Sbjct: 1 MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60 Query: 61 MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120 MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ Sbjct: 61 MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120 Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF Sbjct: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174 >gi|254781153|ref|YP_003065566.1| hypothetical protein CLIBASIA_05300 [Candidatus Liberibacter asiaticus str. psy62] Length = 30 Score = 54.3 bits (129), Expect = 2e-09, Method: Composition-based stats. Identities = 24/25 (96%), Positives = 25/25 (100%) Query: 1 MANNTGLSPIQAGEKRVNVDDKRML 25 MANNTGLSPIQAGEKRVNVDDKR+L Sbjct: 1 MANNTGLSPIQAGEKRVNVDDKRIL 25 >gi|254780720|ref|YP_003065133.1| Ferroxidase [Candidatus Liberibacter asiaticus str. psy62] Length = 164 Score = 23.1 bits (48), Expect = 3.8, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 7/47 (14%) Query: 113 CRQYLLRQAFEEAVHSHTFQYI--ITSLGLDEGELFNMYREVPSITA 157 C +LL+ A EE HSH + +T LG+ E + ++ E P I+A Sbjct: 38 CCNFLLKHAMEE--HSHVIRIFKHLTDLGV-EAKFSSI--EAPVISA 79 >gi|254781049|ref|YP_003065462.1| succinyl-CoA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 398 Score = 22.7 bits (47), Expect = 4.6, Method: Compositional matrix adjust. Identities = 11/32 (34%), Positives = 13/32 (40%) Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134 A+YRHL E R + E H YI Sbjct: 232 ALYRHLDIQELRDVSEEDSREIEAKQHNLSYI 263 >gi|254780191|ref|YP_003064604.1| alanyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 898 Score = 22.3 bits (46), Expect = 5.7, Method: Compositional matrix adjust. Identities = 10/33 (30%), Positives = 20/33 (60%) Query: 62 QDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94 ++ LWK +GL+ D+ + I N F++ +E+ Sbjct: 134 EEAFKLWKKISGLSADKIIRITTNDNFWSMAET 166 >gi|254781172|ref|YP_003065585.1| NAD-dependent DNA ligase LigA [Candidatus Liberibacter asiaticus str. psy62] Length = 731 Score = 21.9 bits (45), Expect = 7.7, Method: Compositional matrix adjust. Identities = 7/42 (16%), Positives = 21/42 (50%) Query: 145 LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186 LF + +P+++ + W ++ + + + +W K+ + I Sbjct: 86 LFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIF 127 >gi|254780558|ref|YP_003064971.1| hypothetical protein CLIBASIA_02225 [Candidatus Liberibacter asiaticus str. psy62] Length = 396 Score = 21.9 bits (45), Expect = 8.6, Method: Compositional matrix adjust. Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 9 PIQAGEKRVNVDDKRMLNARSDVNQLL 35 P+QA ++ N DD L V QLL Sbjct: 228 PMQAFDESYNEDDSYTLKVTQTVQQLL 254 >gi|255764498|ref|YP_003065000.2| site-specific tyrosine recombinase XerD [Candidatus Liberibacter asiaticus str. psy62] Length = 300 Score = 21.6 bits (44), Expect = 9.5, Method: Compositional matrix adjust. Identities = 14/55 (25%), Positives = 24/55 (43%) Query: 140 LDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194 L E + F +E+ A N + Y LS ++RR+ ++ + FLC Sbjct: 20 LKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIRQFYNFLC 74 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.321 0.133 0.411 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 125,195 Number of Sequences: 1233 Number of extensions: 4633 Number of successful extensions: 17 Number of sequences better than 100.0: 10 Number of HSP's better than 100.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 8 Number of HSP's gapped (non-prelim): 10 length of query: 196 length of database: 328,796 effective HSP length: 69 effective length of query: 127 effective length of database: 243,719 effective search space: 30952313 effective search space used: 30952313 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 36 (18.5 bits)