BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 537021.9.peg.75_1
         (136 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|254780845|ref|YP_003065258.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254780964|ref|YP_003065377.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040522|gb|ACT57318.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040641|gb|ACT57437.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 352

 Score =  288 bits (736), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA
Sbjct: 217 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 276

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF
Sbjct: 277 HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 336

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQQGA LKWD
Sbjct: 337 ETRVTEYQQGAELKWD 352


>gi|254780136|ref|YP_003064549.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254781006|ref|YP_003065419.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254039813|gb|ACT56609.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040683|gb|ACT57479.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 125

 Score =  263 bits (672), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 124/125 (99%), Positives = 124/125 (99%)

Query: 12  MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 71
           MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL
Sbjct: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60

Query: 72  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 131
           NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA
Sbjct: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120

Query: 132 GLKWD 136
            LKWD
Sbjct: 121 ELKWD 125


>gi|315122301|ref|YP_004062790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495703|gb|ADR52302.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 372

 Score =  231 bits (590), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 105/136 (77%), Positives = 120/136 (88%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYIMRDES+HLNFGID+INQIKIENPHLWT++FQQ+ R ML EA LLE+AY 
Sbjct: 237 MVGIAEQYQYIMRDESVHLNFGIDMINQIKIENPHLWTEDFQQEVRKMLQEAALLEVAYG 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMPK F+G+NA  CE+YM FI NRRC QIGL+P+F+ TENPFPWMSEVIDL+KEKNFF
Sbjct: 297 KDTMPKPFLGINANLCEKYMYFITNRRCTQIGLDPVFEKTENPFPWMSEVIDLQKEKNFF 356

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ+G  L WD
Sbjct: 357 ETRVTEYQKGTSLDWD 372


>gi|209885874|ref|YP_002289731.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
 gi|209874070|gb|ACI93866.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
          Length = 377

 Score =  228 bits (581), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 103/136 (75%), Positives = 113/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIK+ENPHLWTK FQ + R M+ EA  LE AY 
Sbjct: 242 MVGIAEQYQYILRDESIHLNFGIDVINQIKLENPHLWTKAFQDEVRGMISEAAGLEAAYG 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CEQYM FIANRRC QIGL P+F  TENPFPWMSE +DLKKEKNFF
Sbjct: 302 RDTMPRGFLGLNAALCEQYMHFIANRRCAQIGLAPVFAETENPFPWMSEAMDLKKEKNFF 361

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 362 ETRVIEYQNGGALSWD 377


>gi|72163401|ref|YP_291058.1| ribonucleotide-diphosphate reductase subunit beta [Thermobifida
           fusca YX]
 gi|71917133|gb|AAZ57035.1| ribonucleoside-diphosphate reductase [Thermobifida fusca YX]
          Length = 354

 Score =  225 bits (573), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 103/136 (75%), Positives = 116/136 (85%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIKIENPHLWT+EFQ + RTML EA  LE AY 
Sbjct: 219 MVGIAEQYQYILRDESIHLNFGIDVINQIKIENPHLWTEEFQDEVRTMLIEACELEAAYG 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            ETMP+G +GLNA  CEQYM+FI +RR  Q+GL P+F  TENPFPWMSE++DLKKEKNFF
Sbjct: 279 RETMPRGILGLNAKLCEQYMRFITDRRAEQLGLAPIFGETENPFPWMSEMMDLKKEKNFF 338

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G+GL WD
Sbjct: 339 ETRVIEYQTGSGLSWD 354


>gi|256377255|ref|YP_003100915.1| ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
 gi|255921558|gb|ACU37069.1| Ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
          Length = 358

 Score =  224 bits (571), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 102/136 (75%), Positives = 112/136 (82%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGID INQIKIENPHLW + FQ + RTML EA  LEIAY 
Sbjct: 223 MVGIAEQYQYILRDESIHLNFGIDAINQIKIENPHLWGEAFQAEVRTMLAEACELEIAYG 282

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +GLNA  CEQYM+FI NRRC Q+GLEP+F  TENPFPWMSE +DLKKEKNFF
Sbjct: 283 RDTMPNGLLGLNAELCEQYMRFITNRRCAQLGLEPVFAATENPFPWMSEAVDLKKEKNFF 342

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEY  G  L WD
Sbjct: 343 ETRVTEYASGGTLDWD 358


>gi|134097869|ref|YP_001103530.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291007412|ref|ZP_06565385.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133910492|emb|CAM00605.1| ribonucleoside-diphosphate reductase, beta subunit
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 360

 Score =  224 bits (571), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 101/136 (74%), Positives = 114/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGID INQIKIENPHLWT EFQ++ RTML EA  LE+AY 
Sbjct: 225 MVGIAEQYQYILRDESIHLNFGIDCINQIKIENPHLWTPEFQEEVRTMLTEACELEVAYG 284

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA  CE+YM+FI NRRC Q+GLEP+F  T NPFPWMSE +DLKKEKNFF
Sbjct: 285 RDTMPRGILGLNAGLCEEYMRFITNRRCAQLGLEPVFPETANPFPWMSEAMDLKKEKNFF 344

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 345 ETRVIEYQSGGALDWD 360


>gi|226227154|ref|YP_002761260.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
 gi|226090345|dbj|BAH38790.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
          Length = 371

 Score =  224 bits (570), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 100/136 (73%), Positives = 113/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIK+ENPHLW+  FQ++ R ML EA  LE+AY 
Sbjct: 236 MVGIAEQYQYILRDESIHLNFGIDVINQIKVENPHLWSAAFQEEVRQMLAEACELEVAYG 295

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CE YM FI NRRC Q+GL P+F  T+NPFPWMSE IDLKKEKNFF
Sbjct: 296 RDTMPRGFLGLNAALCETYMHFITNRRCAQLGLAPVFPETDNPFPWMSEAIDLKKEKNFF 355

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  LKWD
Sbjct: 356 ETRVIEYQNGGALKWD 371


>gi|110635036|ref|YP_675244.1| ribonucleotide-diphosphate reductase subunit beta [Mesorhizobium
           sp. BNC1]
 gi|110286020|gb|ABG64079.1| ribonucleotide reductase [Chelativorans sp. BNC1]
          Length = 369

 Score =  223 bits (569), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 102/136 (75%), Positives = 113/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIK ENPHLWT EFQ++ R ML +A  LE AY 
Sbjct: 234 MVGIAEQYQYILRDESIHLNFGIDVINQIKHENPHLWTPEFQEELRRMLKDAAELEAAYG 293

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CEQYM FIANRRC Q+GL P+F  TENPFPWMSE +DLKKEKNFF
Sbjct: 294 RDTMPRGFLGLNAGQCEQYMHFIANRRCAQLGLPPVFPETENPFPWMSEAMDLKKEKNFF 353

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 354 ETRVIEYQNGGALSWD 369


>gi|92119123|ref|YP_578852.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           hamburgensis X14]
 gi|91802017|gb|ABE64392.1| Ribonucleoside-diphosphate reductase [Nitrobacter hamburgensis X14]
          Length = 416

 Score =  222 bits (566), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 99/136 (72%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIKIENPHLW+K FQ++ R ML  A  LE AY 
Sbjct: 281 MVGIAEQYQYILRDESIHLNFGIDVINQIKIENPHLWSKPFQEEVRAMLKNAAELEAAYG 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CEQYM  IANRRC Q+GL P+F   +NPFPWMSE +DLKKEKNFF
Sbjct: 341 RDTMPRGFLGLNAALCEQYMHVIANRRCAQLGLAPVFAEADNPFPWMSEAMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQNGGALAWD 416


>gi|85714830|ref|ZP_01045816.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
 gi|85698316|gb|EAQ36187.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
          Length = 389

 Score =  221 bits (563), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 99/136 (72%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+GIAEQYQYI+RDES+HLNFGIDVINQIKIENPHLWTK FQ + R ML  A  LE AY 
Sbjct: 254 MIGIAEQYQYILRDESIHLNFGIDVINQIKIENPHLWTKTFQDEVRAMLKNAAELEAAYG 313

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CE YM  IANRRC Q+GL P+F  T+NPFPWMSE +DLKKEKNFF
Sbjct: 314 RDTMPRGFLGLNAALCETYMHVIANRRCAQLGLAPVFAETDNPFPWMSEAMDLKKEKNFF 373

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 374 ETRVIEYQNGGALAWD 389


>gi|299134880|ref|ZP_07028072.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
 gi|298590690|gb|EFI50893.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
          Length = 373

 Score =  221 bits (563), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 100/136 (73%), Positives = 112/136 (82%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIK+EN HLWTK FQ+  R M+ +A  LE AY 
Sbjct: 238 MVGIAEQYQYILRDESIHLNFGIDVINQIKLENQHLWTKAFQEDVRGMIRDAAELEAAYG 297

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CEQYM FIANRRC QIGL P+F  TENPFPWMSE +DLKKEKNFF
Sbjct: 298 RDTMPRGFLGLNAALCEQYMHFIANRRCAQIGLTPVFPETENPFPWMSEAMDLKKEKNFF 357

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 358 ETRVIEYQNGGALSWE 373


>gi|90425007|ref|YP_533377.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris BisB18]
 gi|90107021|gb|ABD89058.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           BisB18]
          Length = 386

 Score =  221 bits (562), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 100/136 (73%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIKIENP LWT  FQ++ R ML EA  LE AY+
Sbjct: 251 MVGIAEQYQYILRDESIHLNFGIDVINQIKIENPKLWTAGFQEELRGMLQEAAELEAAYS 310

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CEQYM FI NRRC Q+GL P+F   ENPFPWMSE +DLKKEKNFF
Sbjct: 311 RDTMPRGFLGLNAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFF 370

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 371 ETRVIEYQNGGALTWD 386


>gi|297563527|ref|YP_003682501.1| ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847975|gb|ADH69995.1| Ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 360

 Score =  220 bits (560), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 100/136 (73%), Positives = 114/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIKIENPHLW++EFQ + R ML EA  LE+AY 
Sbjct: 225 MVGIAEQYQYILRDESIHLNFGIDVINQIKIENPHLWSEEFQAEVRQMLTEACELEVAYG 284

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            ETMP+G +GLNA  CE+YM FI +RR  QIGL P+F  TENPFPWMSE++DL+KEKNFF
Sbjct: 285 RETMPRGVLGLNAELCEKYMHFITDRRAEQIGLAPIFGETENPFPWMSEMMDLQKEKNFF 344

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G GL WD
Sbjct: 345 ETRVIEYQTGGGLDWD 360


>gi|324998522|ref|ZP_08119634.1| ribonucleoside-diphosphate reductase beta chain [Pseudonocardia sp.
           P1]
          Length = 358

 Score =  219 bits (558), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 97/136 (71%), Positives = 114/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG+AEQYQYI+RDES+HLNFGID INQIKIENPHLWT+EF  + R MLHEA  LE+AYA
Sbjct: 223 MVGVAEQYQYILRDESIHLNFGIDCINQIKIENPHLWTEEFAAEIRAMLHEACELEVAYA 282

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GL A SCEQY++FI +RR  QIGL PLF   +NPFPWMSE +DL+KEKNFF
Sbjct: 283 RDTMPRGMLGLTAESCEQYLRFITDRRAEQIGLAPLFGQADNPFPWMSEAMDLRKEKNFF 342

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEY+ G  L+WD
Sbjct: 343 ETRVTEYRTGGSLEWD 358


>gi|115525181|ref|YP_782092.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53]
 gi|115519128|gb|ABJ07112.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53]
          Length = 223

 Score =  218 bits (555), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 99/136 (72%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGID+INQIKIENP LWT  FQ++ R ML EA  LE AY 
Sbjct: 88  MVGIAEQYQYILRDESIHLNFGIDIINQIKIENPELWTAGFQEELRGMLREAAELEAAYC 147

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF GLNA  CEQYM FI NRRC Q+GL P+F   ENPFPWMSE +DLKKEKNFF
Sbjct: 148 RDTMPRGFFGLNAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFF 207

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 208 ETRVIEYQNGGALTWD 223


>gi|75677068|ref|YP_319489.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           winogradskyi Nb-255]
 gi|74421938|gb|ABA06137.1| ribonucleotide reductase [Nitrobacter winogradskyi Nb-255]
          Length = 391

 Score =  218 bits (554), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 97/136 (71%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGID+INQIKIENPHLW+K FQ++ R ML  A  LE AY 
Sbjct: 256 MVGIAEQYQYILRDESIHLNFGIDIINQIKIENPHLWSKPFQEEVRAMLKNAADLEAAYG 315

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CE YM  IANRRC Q+GL P+F   +NPFPWMSE +DLKKEKNFF
Sbjct: 316 RDTMPRGFLGLNATLCETYMHVIANRRCAQLGLAPVFPDADNPFPWMSEAMDLKKEKNFF 375

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 376 ETRVIEYQNGGALAWD 391


>gi|257055668|ref|YP_003133500.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
 gi|256585540|gb|ACU96673.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
          Length = 349

 Score =  217 bits (552), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 98/136 (72%), Positives = 114/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFG+D INQIK ENPHLWT EFQQ+ R ML EA  LE+AYA
Sbjct: 214 MVGIAEQYQYILRDESIHLNFGVDCINQIKAENPHLWTPEFQQQVRDMLVEACELEVAYA 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           H+TMP+  +GL+A  CEQYM FI +RR  Q+GL+P+F   ENPFPWMSEVIDL+KEKNFF
Sbjct: 274 HDTMPRPMLGLSAELCEQYMHFITDRRAAQLGLDPVFGERENPFPWMSEVIDLRKEKNFF 333

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVT+Y+ GA L WD
Sbjct: 334 ETRVTDYRSGAALAWD 349


>gi|300784783|ref|YP_003765074.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
 gi|299794297|gb|ADJ44672.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
          Length = 357

 Score =  216 bits (551), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 98/136 (72%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA  LE+ YA
Sbjct: 222 MVGIAEQYQYILRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLKEACELEVKYA 281

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GL+A  CEQYM F+ +RR  QIGL P+F  TENPFPWMSE +DLKKEKNFF
Sbjct: 282 RDTMPRGMLGLSAQLCEQYMHFVTDRRAQQIGLAPIFGETENPFPWMSEAMDLKKEKNFF 341

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 342 ETRVIEYQSGGALDWD 357


>gi|261855609|ref|YP_003262892.1| ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
 gi|261836078|gb|ACX95845.1| Ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
          Length = 398

 Score =  215 bits (548), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 98/135 (72%), Positives = 110/135 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GIAEQYQYIMRDES+H+NFGIDVINQIKIENPHLWT++F+ +   ML EA  LEIAYA
Sbjct: 264 MTGIAEQYQYIMRDESIHMNFGIDVINQIKIENPHLWTEDFKAEVTRMLKEAAELEIAYA 323

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +GLNA  C +Y+ FIANRRC+QIGL  LF    NPFPWMSEVIDLKKEKNFF
Sbjct: 324 RDTMPHGLLGLNAEMCAEYLHFIANRRCNQIGLAELFPGATNPFPWMSEVIDLKKEKNFF 383

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 384 ETRVTDYQTGGALNW 398


>gi|302525965|ref|ZP_07278307.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
 gi|302434860|gb|EFL06676.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
          Length = 357

 Score =  214 bits (544), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 97/136 (71%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA  LE+ YA
Sbjct: 222 MVGIAEQYQYILRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLQEACELEVKYA 281

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GL+A  CEQYM FI +RR  QIGL P++   ENPFPWMSE +DLKKEKNFF
Sbjct: 282 RDTMPRGMLGLSADLCEQYMHFITDRRAQQIGLPPIYGENENPFPWMSEAMDLKKEKNFF 341

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 342 ETRVIEYQSGGALDWD 357


>gi|192291019|ref|YP_001991624.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris TIE-1]
 gi|192284768|gb|ACF01149.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           TIE-1]
          Length = 373

 Score =  211 bits (537), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 94/136 (69%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GIAEQYQYI+RDES+HLNFGIDVINQIK+EN  +WT  FQ   R M+H+A  LE AY 
Sbjct: 238 MTGIAEQYQYILRDESIHLNFGIDVINQIKLENAAVWTASFQDDIRGMIHDAAELEAAYG 297

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +GLNA  CE YM FIANRRC Q+GL P+F  T+NPFPWMSE +DLKKEKNFF
Sbjct: 298 RDTMPHGLLGLNAALCESYMHFIANRRCVQLGLRPVFAETDNPFPWMSETMDLKKEKNFF 357

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 358 ETRVIEYQNGGALDWD 373


>gi|300022335|ref|YP_003754946.1| ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524156|gb|ADJ22625.1| Ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 374

 Score =  210 bits (535), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 96/136 (70%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIK EN HLW+K FQ + R ML +A  LE AY 
Sbjct: 239 MVGIAEQYQYILRDESIHLNFGIDVINQIKAENAHLWSKAFQDEVRGMLRDAAQLEAAYG 298

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +GLN    EQYM+FIANRRC Q+GL P+FK  ENPFPWMSE +DLKKEKNFF
Sbjct: 299 RDTMPTGLLGLNPGLTEQYMEFIANRRCAQLGLTPVFKDRENPFPWMSEAMDLKKEKNFF 358

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 359 ETRVIEYQNGGALSWE 374


>gi|284032753|ref|YP_003382684.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
 gi|283812046|gb|ADB33885.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
          Length = 354

 Score =  210 bits (534), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 97/136 (71%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDESLHLNFGID INQIK+ENPHLWT  FQ + R ML EA  LE+AY 
Sbjct: 219 MVGIAEQYQYILRDESLHLNFGIDCINQIKLENPHLWTPAFQAEVRRMLTEACELEVAYG 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             T+P G +GL A  CEQYM FI +RR  Q+GL PLF  T NPF WMSEV+DLKKEKNFF
Sbjct: 279 RATLPNGMLGLTAELCEQYMHFITDRRAEQLGLAPLFGETRNPFGWMSEVMDLKKEKNFF 338

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G GL WD
Sbjct: 339 ETRVIEYQSGGGLSWD 354


>gi|300113307|ref|YP_003759882.1| ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
 gi|299539244|gb|ADJ27561.1| Ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
          Length = 412

 Score =  208 bits (530), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 93/136 (68%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYIMRDES+H+NFGIDVINQIK+ENPHLW+  F+Q++  M+ EA  LE  YA
Sbjct: 277 MTGTAEQFQYIMRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYA 336

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           H+TMP+G +GLNAP  E+Y++FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFF
Sbjct: 337 HDTMPRGVLGLNAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFF 396

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 397 ETRVTEYQTGGALSWD 412


>gi|77165986|ref|YP_344511.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosococcus
           oceani ATCC 19707]
 gi|254436303|ref|ZP_05049809.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
 gi|76884300|gb|ABA58981.1| Ribonucleoside-diphosphate reductase [Nitrosococcus oceani ATCC
           19707]
 gi|207087993|gb|EDZ65266.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
          Length = 412

 Score =  208 bits (530), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 93/136 (68%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYIMRDES+H+NFGIDVINQIK+ENPHLW+  F+Q++  M+ EA  LE  YA
Sbjct: 277 MTGTAEQFQYIMRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYA 336

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           H+TMP+G +GLNAP  E+Y++FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFF
Sbjct: 337 HDTMPRGVLGLNAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFF 396

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 397 ETRVTEYQTGGALSWD 412


>gi|292490774|ref|YP_003526213.1| ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
 gi|291579369|gb|ADE13826.1| Ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
          Length = 415

 Score =  208 bits (530), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 93/136 (68%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYIMRDES+H+NFGIDVINQIKIENPHLWT  F+Q++  M+ EA  LE  YA
Sbjct: 280 MTGTAEQFQYIMRDESMHMNFGIDVINQIKIENPHLWTDSFKQETIQMIREAVSLETQYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           ++TMP+G +GLNAP  ++Y++FIANRRC QIGL   +    NPFPWMSE++DLKKEKNFF
Sbjct: 340 YDTMPRGVLGLNAPMFDEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEILDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  LKWD
Sbjct: 400 ETRVTEYQTGGALKWD 415


>gi|220935777|ref|YP_002514676.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219997087|gb|ACL73689.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 408

 Score =  207 bits (527), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 91/136 (66%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+H+NFGIDVINQIK+ENPHLWT  F+++ RTM+ +A  LE  YA
Sbjct: 273 MTGVAEQFQYILRDESMHMNFGIDVINQIKVENPHLWTAAFKEEMRTMIRDAVELEAQYA 332

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+ FIANRRC QIGL  ++   ENPFPWMSEV+DLKKEKNFF
Sbjct: 333 RDTMPRGVLGMNAAMFEEYLHFIANRRCAQIGLAEIYPGAENPFPWMSEVLDLKKEKNFF 392

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 393 ETRVTEYQTGGALSWD 408


>gi|114321252|ref|YP_742935.1| ribonucleotide-diphosphate reductase subunit beta [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227646|gb|ABI57445.1| Ribonucleoside-diphosphate reductase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 354

 Score =  206 bits (525), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 92/136 (67%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GIAE YQYI+RDES+HLNFGIDVINQI+ ENP LWT +F+Q+  TML EA  LE+AYA
Sbjct: 219 MTGIAEMYQYILRDESIHLNFGIDVINQIRHENPELWTNDFEQEVLTMLREAVELEVAYA 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA  CE+YM FI NRRC Q+GL+ L+    NPFPWMSEV+DL+KEKNFF
Sbjct: 279 RDTMPRGMLGLNADMCEEYMHFITNRRCAQLGLKELYPGATNPFPWMSEVMDLQKEKNFF 338

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVT+Y+ G  L+WD
Sbjct: 339 ETRVTDYRTGGALQWD 354


>gi|289208615|ref|YP_003460681.1| ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
 gi|288944246|gb|ADC71945.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
          Length = 412

 Score =  206 bits (524), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 112/136 (82%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+H+NFGIDVINQIK+ENPHLWT+EF+ + RT++ +A  LE  YA
Sbjct: 277 MTGVAEQFQYILRDESMHMNFGIDVINQIKVENPHLWTEEFKNEMRTLISDAVELEAQYA 336

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+ FIANRRC QIGL  ++   +NPFPWMSEV+DLKKEKNFF
Sbjct: 337 RDTMPRGVLGMNAQMFEEYLHFIANRRCAQIGLAEMYPGADNPFPWMSEVLDLKKEKNFF 396

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 397 ETRVTEYQTGGALSWD 412


>gi|288941383|ref|YP_003443623.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
 gi|288896755|gb|ADC62591.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
          Length = 458

 Score =  204 bits (519), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 94/136 (69%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+Q+   M+ EA  LE  YA
Sbjct: 323 MTGTAEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPEFRQELVGMIREAVELEARYA 382

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           H+TMP+G +GLNA   E Y+ FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFF
Sbjct: 383 HDTMPRGVLGLNAQMFEDYLHFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFF 442

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 443 ETRVTEYQTGGALNWD 458


>gi|192360823|ref|YP_001982048.1| ribonucleotide-diphosphate reductase subunit beta [Cellvibrio
           japonicus Ueda107]
 gi|190686988|gb|ACE84666.1| ribonucleoside reductase, beta subunit [Cellvibrio japonicus
           Ueda107]
          Length = 429

 Score =  204 bits (518), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT EFQQ+   M+ E T LEI YA
Sbjct: 294 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTAEFQQEVLQMILEGTELEIQYA 353

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            ++MP+G +G+NA   E+Y+ FIANRRC Q+GL+  F   +NPFPWMSE++DL+KEKNFF
Sbjct: 354 RDSMPRGVLGMNAAMMEEYLHFIANRRCAQLGLKEQFPGAQNPFPWMSEIMDLRKEKNFF 413

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 414 ETRVIEYQTGGALSWD 429


>gi|300703002|ref|YP_003744604.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
           [Ralstonia solanacearum CFBP2957]
 gi|299070665|emb|CBJ41960.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CFBP2957]
          Length = 402

 Score =  204 bits (518), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 92/136 (67%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 387 ETRVIEYQTGGALSWD 402


>gi|83746810|ref|ZP_00943858.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|207721465|ref|YP_002251905.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
 gi|83726579|gb|EAP73709.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|206586625|emb|CAQ17211.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
          Length = 402

 Score =  204 bits (518), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 92/136 (67%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 387 ETRVIEYQTGGALSWD 402


>gi|254516739|ref|ZP_05128798.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
 gi|219675162|gb|EED31529.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
          Length = 441

 Score =  203 bits (517), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 91/136 (66%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT+EF+Q++  M+ E T LEI YA
Sbjct: 306 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTEEFKQEAIQMILEGTQLEIEYA 365

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFIANRR  QIGL   F   +NPFPWMSE++DL+KEKNFF
Sbjct: 366 RDTMPRGVLGMNAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFF 425

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 426 ETRVIEYQTGGALSWD 441


>gi|207744360|ref|YP_002260752.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
 gi|206595765|emb|CAQ62692.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
          Length = 410

 Score =  203 bits (517), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 92/136 (67%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 275 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 334

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 335 EDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFF 394

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 395 ETRVIEYQTGGALSWD 410


>gi|330983931|gb|EGH82034.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 388

 Score =  203 bits (516), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 112/136 (82%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +VG+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT E ++++  M+ + T LEIAYA
Sbjct: 253 LVGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTDELKREATVMIIQGTQLEIAYA 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFIANRR  QIGL  ++   +NPFPWMSE++DLKKEKNFF
Sbjct: 313 RDTMPRGVLGMNAAMMEEYLQFIANRRLTQIGLPEVYAGAKNPFPWMSEIMDLKKEKNFF 372

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 373 ETRVIEYQTGGALSWD 388


>gi|30250346|ref|NP_842416.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           europaea ATCC 19718]
 gi|30181141|emb|CAD86334.1| Ribonucleotide reductase [Nitrosomonas europaea ATCC 19718]
          Length = 382

 Score =  203 bits (516), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 91/136 (66%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGIDVINQIK+ENPHLWT+EF+++   ++ +A  LE  YA
Sbjct: 247 MTGAAEQYQYILRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYA 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  ++Y++FI NRR HQIGL+PLF    NPFPWMSE+IDLKKEKNFF
Sbjct: 307 EDTMPRGVLGLNAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMIDLKKEKNFF 366

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 367 ETRVIEYQTGGVLSWD 382


>gi|114332419|ref|YP_748641.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           eutropha C91]
 gi|114309433|gb|ABI60676.1| Ribonucleoside-diphosphate reductase [Nitrosomonas eutropha C91]
          Length = 377

 Score =  202 bits (514), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGIDVINQIK+ENPHLWT+EF+++   ++ +A  LE  YA
Sbjct: 242 MTGAAEQYQYILRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYA 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  ++Y++FI NRR HQIGL+PLF    NPFPWMSE++DLKKEKNFF
Sbjct: 302 EDTMPRGVLGLNAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMVDLKKEKNFF 361

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 362 ETRVIEYQTGGVLSWD 377


>gi|307546480|ref|YP_003898959.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
 gi|307218504|emb|CBV43774.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
          Length = 415

 Score =  202 bits (513), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFG+D+INQIKIENPHLWT EFQ +   M+ E T LEIAYA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGVDMINQIKIENPHLWTPEFQDECTQMILEGTELEIAYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            ++MP+G +G+NA   E+Y+ FI NRR  QIGL+  F   +NPFPWMSE+IDL+KEKNFF
Sbjct: 340 RDSMPRGVLGMNAAIMEEYLHFICNRRLAQIGLKEQFPGAQNPFPWMSEIIDLRKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 400 ETRVTEYQVGGALSWD 415


>gi|82703584|ref|YP_413150.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosospira
           multiformis ATCC 25196]
 gi|82411649|gb|ABB75758.1| Ribonucleoside-diphosphate reductase [Nitrosospira multiformis ATCC
           25196]
          Length = 408

 Score =  202 bits (513), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGIDV+NQIK+ENPHLWTKEF+ +   ++ +A  LE  YA
Sbjct: 273 MTGSAEQYQYILRDESMHCNFGIDVVNQIKMENPHLWTKEFRSEISALMQKAVELEYRYA 332

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  ++Y+++IANRRC QIGL+ L+    NPFPWMSE+IDLKKEKNFF
Sbjct: 333 EDTMPRGVLGLNAPMFKEYLRYIANRRCQQIGLDILYPGASNPFPWMSEMIDLKKEKNFF 392

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 393 ETRVTEYQTGGVLNWD 408


>gi|33593916|ref|NP_881560.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           pertussis Tohama I]
 gi|33598411|ref|NP_886054.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           parapertussis 12822]
 gi|33603351|ref|NP_890911.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           bronchiseptica RB50]
 gi|33563990|emb|CAE43255.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           pertussis Tohama I]
 gi|33574540|emb|CAE39187.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           parapertussis]
 gi|33577475|emb|CAE34740.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           bronchiseptica RB50]
          Length = 398

 Score =  201 bits (512), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA
Sbjct: 263 MTGAAEQYMYILRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYA 322

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRRC QIG+EPLF   ENPFPWM+E+IDLKKE+NFF
Sbjct: 323 EDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLFPQEENPFPWMAEMIDLKKERNFF 382

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 383 ETRVIEYQTGGTLSWE 398


>gi|53804295|ref|YP_114081.1| ribonucleotide-diphosphate reductase subunit beta [Methylococcus
           capsulatus str. Bath]
 gi|53758056|gb|AAU92347.1| ribonucleoside-diphosphate reductase, beta subunit [Methylococcus
           capsulatus str. Bath]
          Length = 403

 Score =  201 bits (512), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 91/136 (66%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYIMRDES+H+NFGIDVINQIK+ENPHLWT  F+ +   M+ EA  +E  YA
Sbjct: 268 MTGTAEQFQYIMRDESMHMNFGIDVINQIKVENPHLWTDGFKVEMVQMIREAVDIETQYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           ++TMP+G +GLNAP  ++Y+QFIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFF
Sbjct: 328 YDTMPRGILGLNAPMFKEYLQFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 388 ETRVTEYQTGGTLSWD 403


>gi|92112799|ref|YP_572727.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter
           salexigens DSM 3043]
 gi|91795889|gb|ABE58028.1| Ribonucleoside-diphosphate reductase [Chromohalobacter salexigens
           DSM 3043]
          Length = 420

 Score =  201 bits (511), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFG+D+INQIKIENPHLWT EFQ +   M+ E T LEIAYA
Sbjct: 285 MTGVAEQFQYILRDESMHLNFGVDMINQIKIENPHLWTPEFQDEVTQMIIEGTELEIAYA 344

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            ++MP+G +G+NA   E+Y+ FI NRR  QIGL+  +   ENPFPWMSE+IDL+KEKNFF
Sbjct: 345 RDSMPRGVLGMNAAIMEEYLHFICNRRLAQIGLKEQYPGAENPFPWMSEIIDLRKEKNFF 404

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 405 ETRVTEYQVGGALSWD 420


>gi|226940720|ref|YP_002795794.1| ribonucleotide-diphosphate reductase subunit beta [Laribacter
           hongkongensis HLHK9]
 gi|226715647|gb|ACO74785.1| Ribonucleoside-diphosphate reductase beta chain [Laribacter
           hongkongensis HLHK9]
          Length = 357

 Score =  201 bits (511), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 92/136 (67%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN IK ENPHLWT EFQ++   +  +A  LE AYA
Sbjct: 222 MTGAAEQYQYILRDESMHCNFGIDLINSIKQENPHLWTVEFQEELYGLFRKAIDLEYAYA 281

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y+ FIANRR  QIGLEPLF + +NPFPWMSE+IDLKKEKNFF
Sbjct: 282 EDTMPRGVLGLNAAMFKEYLDFIANRRMQQIGLEPLFTHVDNPFPWMSEMIDLKKEKNFF 341

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 342 ETRVTEYQSGGALDWD 357


>gi|88705571|ref|ZP_01103281.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
 gi|88700084|gb|EAQ97193.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
          Length = 469

 Score =  201 bits (510), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENP LWT+EF+Q++  M+ E T LEI YA
Sbjct: 334 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPQLWTEEFKQEAIQMILEGTQLEIEYA 393

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFIANRR  QIGL   F   +NPFPWMSE++DL+KEKNFF
Sbjct: 394 RDTMPRGVLGMNAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFF 453

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 454 ETRVIEYQTGGALSWD 469


>gi|90022104|ref|YP_527931.1| ribonucleotide-diphosphate reductase subunit beta [Saccharophagus
           degradans 2-40]
 gi|89951704|gb|ABD81719.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 423

 Score =  201 bits (510), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT+EFQ +++ M+ E T LEIAYA
Sbjct: 288 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTEEFQAETKQMILEGTELEIAYA 347

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+ FIANRR  Q+GL   +   +NPFPWMSE++DL+KEKNFF
Sbjct: 348 RDTMPRGVLGMNAAMMEEYLHFIANRRMAQLGLAEAYPGAKNPFPWMSEIMDLRKEKNFF 407

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 408 ETRVIEYQTGGALSWE 423


>gi|325519933|gb|EGC99191.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           TJI49]
          Length = 403

 Score =  201 bits (510), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|206561765|ref|YP_002232530.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia J2315]
 gi|254246390|ref|ZP_04939711.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|124871166|gb|EAY62882.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|198037807|emb|CAR53751.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           cenocepacia J2315]
          Length = 403

 Score =  200 bits (509), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|163854887|ref|YP_001629185.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           petrii DSM 12804]
 gi|163258615|emb|CAP40914.1| ribonucleoside-diphosphate reductase beta chain [Bordetella petrii]
          Length = 396

 Score =  200 bits (509), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA
Sbjct: 261 MTGAAEQYMYILRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRGLFQKAVELEYAYA 320

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFF
Sbjct: 321 EDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFF 380

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 381 ETRVIEYQTGGTLSWE 396


>gi|187479453|ref|YP_787478.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella avium
           197N]
 gi|115424040|emb|CAJ50593.1| ribonucleoside-diphosphate reductase beta chain [Bordetella avium
           197N]
          Length = 394

 Score =  200 bits (508), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA
Sbjct: 259 MTGAAEQYMYILRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYA 318

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFF
Sbjct: 319 EDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFF 378

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 379 ETRVIEYQTGGTLSWE 394


>gi|121598515|ref|YP_991780.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei SAVP1]
 gi|124385654|ref|YP_001027273.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10229]
 gi|126439848|ref|YP_001060484.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 668]
 gi|126451145|ref|YP_001082790.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10247]
 gi|126453692|ref|YP_001067748.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1106a]
 gi|134280207|ref|ZP_01766918.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|166998593|ref|ZP_02264451.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|167721297|ref|ZP_02404533.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei DM98]
 gi|167740266|ref|ZP_02413040.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 14]
 gi|167817486|ref|ZP_02449166.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 91]
 gi|167847373|ref|ZP_02472881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei B7210]
 gi|167895962|ref|ZP_02483364.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 7894]
 gi|167904346|ref|ZP_02491551.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei NCTC 13177]
 gi|167912606|ref|ZP_02499697.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 112]
 gi|217420440|ref|ZP_03451945.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|226196790|ref|ZP_03792369.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813879|ref|YP_002898330.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238561262|ref|ZP_00442338.2| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242316188|ref|ZP_04815204.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|254178822|ref|ZP_04885476.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|254199038|ref|ZP_04905453.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|254202774|ref|ZP_04909137.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|254259655|ref|ZP_04950709.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
 gi|254299327|ref|ZP_04966777.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|121227325|gb|ABM49843.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei SAVP1]
 gi|124293674|gb|ABN02943.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10229]
 gi|126219341|gb|ABN82847.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 668]
 gi|126227334|gb|ABN90874.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106a]
 gi|126244015|gb|ABO07108.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10247]
 gi|134248214|gb|EBA48297.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|147747021|gb|EDK54098.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|157808756|gb|EDO85926.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|160694736|gb|EDP84744.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|169656868|gb|EDS88265.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|217395852|gb|EEC35869.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|225931050|gb|EEH27058.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237506031|gb|ACQ98349.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238524965|gb|EEP88395.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242139427|gb|EES25829.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|243065276|gb|EES47462.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|254218344|gb|EET07728.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
          Length = 403

 Score =  200 bits (508), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|256822964|ref|YP_003146927.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
 gi|256796503|gb|ACV27159.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
          Length = 421

 Score =  200 bits (508), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFG+D+INQIK+ENPHLWT EF+Q+   M+ E T LEI YA
Sbjct: 286 MTGVAEQFQYILRDESMHLNFGVDIINQIKLENPHLWTAEFKQEVLQMILEGTQLEIEYA 345

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFI NRR  Q+GL   FK   NPFPWMSE++DLKKEKNFF
Sbjct: 346 RDTMPRGVLGMNAGMMEEYLQFICNRRLAQLGLPEQFKNVSNPFPWMSEIMDLKKEKNFF 405

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 406 ETRVIEYQTGGALSWD 421


>gi|254282900|ref|ZP_04957868.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
 gi|219679103|gb|EED35452.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
          Length = 421

 Score =  200 bits (508), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT EFQ++   M+ E T LEI YA
Sbjct: 286 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTAEFQEEVVQMILEGTQLEIEYA 345

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFI NRR +Q+GL   +   +NPFPWMSE++DL+KEKNFF
Sbjct: 346 RDTMPRGVLGMNAAMMEEYLQFICNRRLNQLGLSEQYPGVQNPFPWMSEIMDLRKEKNFF 405

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 406 ETRVIEYQTGGALTWD 421


>gi|161525957|ref|YP_001580969.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|160343386|gb|ABX16472.1| Ribonucleoside-diphosphate reductase [Burkholderia multivorans ATCC
           17616]
          Length = 396

 Score =  200 bits (508), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 261 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 320

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 321 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 380

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 381 ETRVIEYQTGGALSWE 396


>gi|76808925|ref|YP_334881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1710b]
 gi|254208116|ref|ZP_04914466.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
 gi|76578378|gb|ABA47853.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei 1710b]
 gi|147752010|gb|EDK59077.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
          Length = 376

 Score =  200 bits (508), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 241 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 300

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 301 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 360

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 361 ETRVIEYQTGGALSWE 376


>gi|330430727|gb|AEC22061.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp.
           T7-7]
          Length = 387

 Score =  200 bits (508), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA
Sbjct: 252 MTGAAEQYMYILRDESMHCNFGIDLINTIKLENPHLWTAEFREELRELFKKAVDLEYAYA 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FIANRRC QIGLEPLF   ENPFPWM+E+IDLKKE+NFF
Sbjct: 312 EDTMPRGVLGLNASMFKSYLRFIANRRCQQIGLEPLFGQEENPFPWMAEMIDLKKERNFF 371

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 372 ETRVIEYQTGGALSWE 387


>gi|189349324|ref|YP_001944952.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|221213238|ref|ZP_03586213.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
 gi|189333346|dbj|BAG42416.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           multivorans ATCC 17616]
 gi|221166690|gb|EED99161.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
          Length = 403

 Score =  200 bits (508), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|83719302|ref|YP_441701.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
 gi|83653127|gb|ABC37190.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           thailandensis E264]
          Length = 377

 Score =  200 bits (508), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 242 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 302 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 361

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 362 ETRVIEYQTGGALSWE 377


>gi|119504228|ref|ZP_01626308.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
 gi|119459736|gb|EAW40831.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
          Length = 419

 Score =  199 bits (507), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENP LWT EFQQ++  M+ E T LEIAYA
Sbjct: 284 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPLLWTPEFQQEAIQMILEGTELEIAYA 343

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFI NRR +Q+GL   F   +NPFPWMSE++DL+KEKNFF
Sbjct: 344 RDTMPRGVLGMNAAMMEEYLQFICNRRLNQVGLPEQFPGAQNPFPWMSEIMDLRKEKNFF 403

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 404 ETRVIEYQTGGALTWD 419


>gi|167574685|ref|ZP_02367559.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis C6786]
          Length = 369

 Score =  199 bits (507), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 234 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 293

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 294 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 353

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 354 ETRVIEYQTGGALSWE 369


>gi|167564160|ref|ZP_02357076.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis EO147]
          Length = 369

 Score =  199 bits (507), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 234 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 293

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 294 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 353

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 354 ETRVIEYQTGGALSWE 369


>gi|73542624|ref|YP_297144.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha JMP134]
 gi|72120037|gb|AAZ62300.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134]
          Length = 394

 Score =  199 bits (507), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 259 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 318

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 319 EDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFF 378

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 379 ETRVIEYQTGGALSWD 394


>gi|167825888|ref|ZP_02457359.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 9]
 gi|167924622|ref|ZP_02511713.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei BCC215]
 gi|254180586|ref|ZP_04887184.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
 gi|254190977|ref|ZP_04897483.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157938651|gb|EDO94321.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|184211125|gb|EDU08168.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
          Length = 372

 Score =  199 bits (507), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 237 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 297 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 356

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 357 ETRVIEYQTGGALSWE 372


>gi|194290770|ref|YP_002006677.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           taiwanensis LMG 19424]
 gi|193224605|emb|CAQ70616.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Cupriavidus taiwanensis LMG 19424]
          Length = 396

 Score =  199 bits (507), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 261 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 320

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 321 EDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFF 380

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 381 ETRVIEYQTGGALSWD 396


>gi|317402620|gb|EFV83180.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans C54]
          Length = 399

 Score =  199 bits (507), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN +K+ENPHLWT EF+++ R +  +A  LE AYA
Sbjct: 264 MTGAAEQYMYILRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYA 323

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFF
Sbjct: 324 EDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFF 383

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 384 ETRVIEYQTGGTLSWE 399


>gi|311103857|ref|YP_003976710.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
 gi|310758546|gb|ADP13995.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
          Length = 399

 Score =  199 bits (506), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN +K+ENPHLWT EF+++ R +  +A  LE AYA
Sbjct: 264 MTGAAEQYMYILRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYA 323

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFF
Sbjct: 324 EDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFF 383

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 384 ETRVIEYQTGGTLSWE 399


>gi|170699976|ref|ZP_02891003.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
 gi|170135124|gb|EDT03425.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
          Length = 403

 Score =  199 bits (506), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|254253304|ref|ZP_04946622.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
 gi|124895913|gb|EAY69793.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
          Length = 403

 Score =  199 bits (506), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|221202418|ref|ZP_03575450.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
 gi|221208122|ref|ZP_03581127.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221172025|gb|EEE04467.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221177695|gb|EEE10110.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
          Length = 372

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 237 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 297 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 356

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 357 ETRVIEYQTGGALSWE 372


>gi|113869188|ref|YP_727677.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha H16]
 gi|113527964|emb|CAJ94309.1| Ribonucleoside-diphosphate reductase beta subunit [Ralstonia
           eutropha H16]
          Length = 395

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 260 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 319

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 320 EDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFF 379

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 380 ETRVIEYQTGGALSWD 395


>gi|78065156|ref|YP_367925.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           383]
 gi|77965901|gb|ABB07281.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. 383]
          Length = 403

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|115350552|ref|YP_772391.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria AMMD]
 gi|172059584|ref|YP_001807236.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria MC40-6]
 gi|115280540|gb|ABI86057.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria AMMD]
 gi|171992101|gb|ACB63020.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           MC40-6]
          Length = 403

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|171318520|ref|ZP_02907672.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
 gi|171096306|gb|EDT41212.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
          Length = 403

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|170731918|ref|YP_001763865.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia MC0-3]
 gi|169815160|gb|ACA89743.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           MC0-3]
          Length = 403

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|209521089|ref|ZP_03269819.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
 gi|209498472|gb|EDZ98597.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
          Length = 411

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 276 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYA 335

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 336 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 395

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 396 ETRVIEYQTGGALSWE 411


>gi|295677726|ref|YP_003606250.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
 gi|295437569|gb|ADG16739.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
          Length = 411

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 276 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYA 335

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 336 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 395

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 396 ETRVIEYQTGGALSWE 411


>gi|53720599|ref|YP_109585.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei K96243]
 gi|53726102|ref|YP_104055.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei ATCC 23344]
 gi|52211013|emb|CAH37001.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei K96243]
 gi|52429525|gb|AAU50118.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 23344]
          Length = 350

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 215 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 274

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 275 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 334

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 335 ETRVIEYQTGGALSWE 350


>gi|167580513|ref|ZP_02373387.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis TXDOH]
 gi|167618621|ref|ZP_02387252.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis Bt4]
 gi|257137870|ref|ZP_05586132.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
          Length = 350

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 215 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 274

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 275 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 334

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 335 ETRVIEYQTGGALSWE 350


>gi|302877617|ref|YP_003846181.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
 gi|302580406|gb|ADL54417.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
          Length = 365

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+HLNFG+D+INQIK+ENPHLWT  F+++ R ++ +   LE AYA
Sbjct: 230 MTGAAEQYQYILRDESMHLNFGVDLINQIKMENPHLWTAAFREEIRGLMQKGVELEYAYA 289

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y++FIANRRC QIG++ L++   NPFPWMSE+IDLKKEKNFF
Sbjct: 290 EDTMPRGILGLNATMFKEYLRFIANRRCQQIGVDILYQGATNPFPWMSEMIDLKKEKNFF 349

Query: 121 ETRVTEYQQGAGLKWD 136
           E+RVTEYQ G  L WD
Sbjct: 350 ESRVTEYQTGGTLSWD 365


>gi|291615085|ref|YP_003525242.1| ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
 gi|291585197|gb|ADE12855.1| Ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
          Length = 382

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+HLNFG+DVINQIK+ENPHLWT  F+++ R ++ +   LE  YA
Sbjct: 247 MTGAAEQYQYILRDESMHLNFGVDVINQIKLENPHLWTPAFREEVRGLIQKGVELEYRYA 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y++FIANRRC QIG++ L++   NPFPWM+E+IDLKKEKNFF
Sbjct: 307 EDTMPRGVLGLNAGMFKEYLRFIANRRCQQIGVDMLYQGATNPFPWMAEMIDLKKEKNFF 366

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 367 ETRVTEYQTGGALSWD 382


>gi|167837963|ref|ZP_02464822.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis MSMB43]
          Length = 303

 Score =  199 bits (505), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 168 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 227

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 228 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 287

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 288 ETRVIEYQTGGALSWE 303


>gi|238026167|ref|YP_002910398.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           glumae BGR1]
 gi|237875361|gb|ACR27694.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           glumae BGR1]
          Length = 407

 Score =  199 bits (505), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 272 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKRAVELEYRYA 331

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FIANRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 332 EDTMPRGVLGLNAAMFKSYLRFIANRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 391

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 392 ETRVIEYQTGGALSWE 407


>gi|107021673|ref|YP_620000.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia AU 1054]
 gi|116688619|ref|YP_834242.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia HI2424]
 gi|105891862|gb|ABF75027.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia AU
           1054]
 gi|116646708|gb|ABK07349.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           HI2424]
          Length = 382

 Score =  199 bits (505), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 247 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 307 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 366

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 367 ETRVIEYQTGGALSWE 382


>gi|254784923|ref|YP_003072351.1| ribonucleotide-diphosphate reductase subunit beta [Teredinibacter
           turnerae T7901]
 gi|237687536|gb|ACR14800.1| ribonucleoside-diphosphate reductase [Teredinibacter turnerae
           T7901]
          Length = 453

 Score =  199 bits (505), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 109/135 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT+ FQQ+ + M+ E T LEI YA
Sbjct: 319 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTESFQQEVKQMVLEGTELEIGYA 378

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+ FIANRR  Q+GL+  +   +NPFPWMSE++DL+KEKNFF
Sbjct: 379 RDTMPRGVLGMNAAIMEEYLHFIANRRLAQLGLKEAYPGAQNPFPWMSEIMDLRKEKNFF 438

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ G  L W
Sbjct: 439 ETRVIEYQTGGALSW 453


>gi|94312018|ref|YP_585228.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           metallidurans CH34]
 gi|93355870|gb|ABF09959.1| Ribonucleoside-diphosphate reductase beta subunit [Cupriavidus
           metallidurans CH34]
          Length = 395

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 90/136 (66%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 260 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 319

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 320 EDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFF 379

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 380 ETRVIEYQTGGALSWD 395


>gi|325983070|ref|YP_004295472.1| ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
 gi|325532589|gb|ADZ27310.1| Ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
          Length = 381

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGIDVINQIK+ENP LWTK F+++   ++ +A  LE  YA
Sbjct: 246 MTGSAEQYQYILRDESMHCNFGIDVINQIKMENPQLWTKAFREEIAALMQKAVALEYRYA 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NAP  ++Y+++IANRRC QIGL+ L+    NPFPWMSE++DLKKEKNFF
Sbjct: 306 EDTMPRGVLGMNAPMFKEYLRYIANRRCQQIGLDTLYPNANNPFPWMSEMMDLKKEKNFF 365

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 366 ETRVTEYQTGGALSWD 381


>gi|260220050|emb|CBA27200.1| Ribonucleoside-diphosphate reductase subunit alpha [Curvibacter
            putative symbiont of Hydra magnipapillata]
          Length = 1306

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 107/136 (78%)

Query: 1    MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
            M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA
Sbjct: 1171 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTPEFKAEIKALFEKAVELEYRYA 1230

Query: 61   HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             +TMP+G +G+NA   + Y+++IANRR  QIGLEPLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 1231 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEPLFPNEENPFPWMSEMIDLKKERNFF 1290

Query: 121  ETRVTEYQQGAGLKWD 136
            ETRV EYQ G  L WD
Sbjct: 1291 ETRVIEYQSGGALSWD 1306


>gi|329893650|ref|ZP_08269784.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
 gi|328923577|gb|EGG30889.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
          Length = 432

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT++FQ++   ML E T +EI YA
Sbjct: 297 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTEDFQKEVIQMLLEGTQIEIEYA 356

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFI NRR  Q+GL   F   +NPFPWMSE++DL+KEKNFF
Sbjct: 357 RDTMPRGVLGMNAAMMEEYLQFICNRRLAQLGLPEQFPGVQNPFPWMSEIMDLRKEKNFF 416

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 417 ETRVIEYQTGGALSWD 432


>gi|134294683|ref|YP_001118418.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           vietnamiensis G4]
 gi|134137840|gb|ABO53583.1| Ribonucleoside-diphosphate reductase [Burkholderia vietnamiensis
           G4]
          Length = 403

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|17547523|ref|NP_520925.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           solanacearum GMI1000]
 gi|17429827|emb|CAD16511.1| putative transmembrane ribonucleoside reductase (small chain)
           oxidoreductase protein [Ralstonia solanacearum GMI1000]
          Length = 400

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 265 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 324

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   +NPFPWMSE+IDLKKE+NFF
Sbjct: 325 EDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFF 384

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 385 ETRVIEYQTGGALSWD 400


>gi|167586060|ref|ZP_02378448.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ubonensis Bu]
          Length = 403

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVDLEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|152980709|ref|YP_001354668.1| ribonucleotide-diphosphate reductase subunit beta
           [Janthinobacterium sp. Marseille]
 gi|151280786|gb|ABR89196.1| ribonucleoside-diphosphate reductase beta chain [Janthinobacterium
           sp. Marseille]
          Length = 392

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G AEQYQYI+RDES+H NFGID+IN IK+ENPHLWT +F+++ +T+   A  LE  YA
Sbjct: 257 MMGAAEQYQYILRDESMHCNFGIDLINTIKLENPHLWTPQFREEIKTLFLRAVELEYRYA 316

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFF
Sbjct: 317 EDTMPRGVLGLNAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFF 376

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 377 ETRVIEYQTGGALNWE 392


>gi|299065648|emb|CBJ36820.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CMR15]
          Length = 398

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 263 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 322

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   +NPFPWMSE+IDLKKE+NFF
Sbjct: 323 EDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFF 382

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 383 ETRVIEYQTGGALSWD 398


>gi|28868867|ref|NP_791486.1| ribonucleoside-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213969520|ref|ZP_03397656.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|301385974|ref|ZP_07234392.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058701|ref|ZP_07250242.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato K40]
 gi|302134408|ref|ZP_07260398.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28852106|gb|AAO55181.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213925616|gb|EEB59175.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|330960626|gb|EGH60886.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. maculicola str. ES4326]
 gi|331016758|gb|EGH96814.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 415

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|320323423|gb|EFW79511.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320327620|gb|EFW83632.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330876273|gb|EGH10422.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 415

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|71737432|ref|YP_275887.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|257485935|ref|ZP_05639976.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289628680|ref|ZP_06461634.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289648392|ref|ZP_06479735.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298487941|ref|ZP_07005980.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|302184861|ref|ZP_07261534.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae 642]
 gi|71557985|gb|AAZ37196.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298157492|gb|EFH98573.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330866023|gb|EGH00732.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330896997|gb|EGH28545.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. japonica str. M301072PT]
 gi|330986742|gb|EGH84845.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331010341|gb|EGH90397.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 415

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|70731866|ref|YP_261608.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf-5]
 gi|68346165|gb|AAY93771.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Pseudomonas fluorescens Pf-5]
          Length = 415

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|330880140|gb|EGH14289.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
 gi|330966559|gb|EGH66819.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 415

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|66046950|ref|YP_236791.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae B728a]
 gi|237798938|ref|ZP_04587399.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|237806191|ref|ZP_04592895.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|63257657|gb|AAY38753.1| Ribonucleoside-diphosphate reductase [Pseudomonas syringae pv.
           syringae B728a]
 gi|330980156|gb|EGH78342.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aptata str. DSM 50252]
 gi|331021792|gb|EGI01849.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331027304|gb|EGI07359.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 415

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|330811278|ref|YP_004355740.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379386|gb|AEA70736.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 415

 Score =  198 bits (503), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|77460516|ref|YP_350023.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf0-1]
 gi|77384519|gb|ABA76032.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens Pf0-1]
          Length = 416

 Score =  198 bits (503), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEASQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|312960686|ref|ZP_07775192.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
 gi|311285212|gb|EFQ63787.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
          Length = 416

 Score =  197 bits (502), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|330892405|gb|EGH25066.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 415

 Score =  197 bits (502), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|229590245|ref|YP_002872364.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229362111|emb|CAY49013.1| putative ribonucleoside-diphosphate reductase beta chain
           [Pseudomonas fluorescens SBW25]
          Length = 416

 Score =  197 bits (502), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|229592166|ref|YP_002874285.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229364032|emb|CAY51597.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens SBW25]
          Length = 416

 Score =  197 bits (502), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|293603286|ref|ZP_06685715.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
 gi|292818321|gb|EFF77373.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
          Length = 398

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN +K+ENPHLWT  F+++ R +  +A  LE AYA
Sbjct: 263 MTGAAEQYMYILRDESMHCNFGIDLINTVKLENPHLWTPAFREEIRELFRKAVELEYAYA 322

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFF
Sbjct: 323 EDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFF 382

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 383 ETRVIEYQTGGTLSWE 398


>gi|312962626|ref|ZP_07777115.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
 gi|311283001|gb|EFQ61593.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
          Length = 136

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 1   MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 60

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 61  RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 120

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 121 ETRVIEYQTGGALSWD 136


>gi|300309722|ref|YP_003773814.1| transmembrane ribonucleoside reductase small subunit
           [Herbaspirillum seropedicae SmR1]
 gi|300072507|gb|ADJ61906.1| transmembrane ribonucleoside reductase (small chain) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 388

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G AEQYQYI+RDES+H NFGID+IN +K+ENPHLWT EF+++ +++   A  LE  YA
Sbjct: 253 MMGAAEQYQYILRDESMHCNFGIDLINTVKMENPHLWTPEFREEIKSLFLRAVELEYRYA 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRR  QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 313 EDTMPRGVLGLNAPMFKSYLRFIANRRAQQIGLDPLFAQEENPFPWMSEMIDLKKERNFF 372

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 373 ETRVIEYQTGGALSWE 388


>gi|187930114|ref|YP_001900601.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12J]
 gi|187727004|gb|ACD28169.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12J]
          Length = 402

 Score =  197 bits (500), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 387 ETRVIEYQTGGALSWE 402


>gi|241664219|ref|YP_002982579.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12D]
 gi|309783064|ref|ZP_07677783.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
 gi|240866246|gb|ACS63907.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|308918172|gb|EFP63850.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
          Length = 402

 Score =  197 bits (500), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 387 ETRVIEYQTGGALSWE 402


>gi|329902475|ref|ZP_08273120.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548767|gb|EGF33404.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 416

 Score =  197 bits (500), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG AEQYQYI+RDES+H NFGID++N IK+ENPHLWT EF+ + + +   A  LE  YA
Sbjct: 281 MVGAAEQYQYILRDESMHCNFGIDLVNTIKMENPHLWTPEFRDEIKALFLTAVELEYRYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFF
Sbjct: 341 EDTMPRGVLGLNAPMFKGYLRFIANRRAQQIGLEPMFENEENPFPWMSEMIDLKKERNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 401 ETRVIEYQTGGALSWE 416


>gi|300690381|ref|YP_003751376.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
 gi|299077441|emb|CBJ50067.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
          Length = 402

 Score =  197 bits (500), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 387 ETRVIEYQTGGALSWE 402


>gi|297538242|ref|YP_003674011.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
 gi|297257589|gb|ADI29434.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
          Length = 376

 Score =  197 bits (500), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGIDVIN IK+ENPHLWT EF+++ +T++ +   LE  YA
Sbjct: 241 MQGAAEQYQYILRDESMHCNFGIDVINTIKLENPHLWTAEFREEIKTLMQKGVELEYQYA 300

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             TMP+G +GLNA   ++Y++FIANRRC QIGL+ L+    NPFPWMSE++DLKKEKNFF
Sbjct: 301 EATMPRGVLGLNATMFKEYLRFIANRRCTQIGLDVLYPGATNPFPWMSEMMDLKKEKNFF 360

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 361 ETRVTEYQTGGALSWD 376


>gi|331006663|ref|ZP_08329944.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
 gi|330419531|gb|EGG93916.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
          Length = 444

 Score =  196 bits (499), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIK+ENPHLWT+EF+ +   M+ E T LEIAYA
Sbjct: 309 MTGVAEQFQYILRDESMHLNFGIDIINQIKLENPHLWTEEFKAEVTQMVLEGTELEIAYA 368

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFI+NRR  Q+GL   +   +NPFPWMSE++DL+KEKNFF
Sbjct: 369 RDTMPRGVLGMNAAMMEEYLQFISNRRLAQLGLTEQYPGAQNPFPWMSEIMDLRKEKNFF 428

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 429 ETRVIEYQTGGALTWE 444


>gi|289677030|ref|ZP_06497920.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae FF5]
          Length = 243

 Score =  196 bits (498), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 108 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 167

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 168 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 227

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 228 ETRVIEYQTGGALSWD 243


>gi|253997287|ref|YP_003049351.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
 gi|253983966|gb|ACT48824.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
          Length = 377

 Score =  196 bits (498), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGIDVIN IK+ENPHLWT EF+ + + ++     LE  YA
Sbjct: 242 MQGAAEQYQYILRDESMHCNFGIDVINTIKLENPHLWTAEFRDEIKGLIQHGVELEYRYA 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             TMP+G +GLNA   ++Y++FIANRRC QIGL+ L++   NPFPWMSE+IDLKKEKNFF
Sbjct: 302 EATMPRGVLGLNATMFKEYLRFIANRRCQQIGLDVLYQGATNPFPWMSEMIDLKKEKNFF 361

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 362 ETRVTEYQTGGALSWD 377


>gi|296160506|ref|ZP_06843322.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
 gi|295889255|gb|EFG69057.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
          Length = 415

 Score =  196 bits (498), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 280 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 340 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 400 ETRVIEYQTGGALTWE 415


>gi|187925407|ref|YP_001897049.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phytofirmans PsJN]
 gi|187716601|gb|ACD17825.1| Ribonucleoside-diphosphate reductase [Burkholderia phytofirmans
           PsJN]
          Length = 415

 Score =  196 bits (498), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 280 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 340 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 400 ETRVIEYQTGGALTWE 415


>gi|74317993|ref|YP_315733.1| ribonucleotide-diphosphate reductase subunit beta [Thiobacillus
           denitrificans ATCC 25259]
 gi|74057488|gb|AAZ97928.1| ribonucleoside-diphosphate reductase beta chain [Thiobacillus
           denitrificans ATCC 25259]
          Length = 376

 Score =  196 bits (498), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN IK ENPHLWT EF+ + RT++ +   LE  YA
Sbjct: 241 MTGAAEQYQYILRDESMHCNFGIDLINTIKQENPHLWTSEFKAEIRTLIQKGVELEFRYA 300

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLN+   ++Y++FI+NRRC QIGL+ +F    NPFPWM+E+IDLKKEKNFF
Sbjct: 301 EDTMPRGVLGLNSAQFKEYLRFISNRRCQQIGLDEMFPGVSNPFPWMAEMIDLKKEKNFF 360

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 361 ETRVTEYQTGGALSWD 376


>gi|186477386|ref|YP_001858856.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phymatum STM815]
 gi|184193845|gb|ACC71810.1| Ribonucleoside-diphosphate reductase [Burkholderia phymatum STM815]
          Length = 407

 Score =  196 bits (498), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 272 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIREIFKHAVDLEYRYA 331

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIG++PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 332 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGIDPLYPNEENPFPWMSEMIDLKKERNFF 391

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 392 ETRVIEYQTGGALSWE 407


>gi|330815478|ref|YP_004359183.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
 gi|327367871|gb|AEA59227.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
          Length = 407

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 272 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKHAVELEYRYA 331

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FIANRRC QIGL+ L+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 332 EDTMPRGVLGLNASMFKSYLRFIANRRCQQIGLDALYPNEENPFPWMSEMIDLKKERNFF 391

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 392 ETRVIEYQTGGALSWE 407


>gi|110833571|ref|YP_692430.1| ribonucleotide-diphosphate reductase subunit beta [Alcanivorax
           borkumensis SK2]
 gi|110646682|emb|CAL16158.1| ribonucleoside reductase, beta subunit [Alcanivorax borkumensis
           SK2]
          Length = 430

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+H+NFGIDVINQIK+ENPHLW  + + K+  M+ E T LEI YA
Sbjct: 295 MTGVAEQFQYILRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGTELEIQYA 354

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFIANRR  Q+GL   FK   NPFPWMSE++DL+KEKNFF
Sbjct: 355 RDTMPRGVLGMNAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFF 414

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L W+
Sbjct: 415 ETRVTEYQVGGALSWE 430


>gi|170695324|ref|ZP_02886470.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
 gi|170139724|gb|EDT07906.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
          Length = 414

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 279 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYA 338

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 339 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 398

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 399 ETRVIEYQTGGALTWE 414


>gi|307731037|ref|YP_003908261.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
 gi|307585572|gb|ADN58970.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
          Length = 411

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 276 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYA 335

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 336 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 395

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 396 ETRVIEYQTGGALTWE 411


>gi|91785256|ref|YP_560462.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           xenovorans LB400]
 gi|91689210|gb|ABE32410.1| Ribonucleoside-diphosphate reductase [Burkholderia xenovorans
           LB400]
          Length = 411

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 276 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYA 335

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 336 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 395

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 396 ETRVIEYQTGGALTWE 411


>gi|134095932|ref|YP_001101007.1| ribonucleotide-diphosphate reductase subunit beta [Herminiimonas
           arsenicoxydans]
 gi|133739835|emb|CAL62886.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Herminiimonas arsenicoxydans]
          Length = 395

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G AEQYQYI+RDES+H NFGID+IN IK+ENPHLWT +F+ + + +   A  LE  YA
Sbjct: 260 MMGAAEQYQYILRDESMHCNFGIDLINTIKLENPHLWTPQFRDEIKALFLRAVELEYRYA 319

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFF
Sbjct: 320 EDTMPRGVLGLNAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFF 379

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 380 ETRVIEYQTGGALNWE 395


>gi|148546452|ref|YP_001266554.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida F1]
 gi|148510510|gb|ABQ77370.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida F1]
          Length = 415

 Score =  196 bits (497), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|254483523|ref|ZP_05096750.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
 gi|214036244|gb|EEB76924.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
          Length = 425

 Score =  195 bits (496), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENP+LWT+ FQQ+   M+ E T +EI YA
Sbjct: 290 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPNLWTETFQQEVIQMILEGTEIEIQYA 349

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+ FIANRR  Q+GL   F   +NPFPWMSE++DL+KEKNFF
Sbjct: 350 RDTMPRGVLGMNAAIMEEYLHFIANRRLSQLGLPEQFAGAQNPFPWMSEIMDLRKEKNFF 409

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 410 ETRVIEYQTGGALSWD 425


>gi|323527395|ref|YP_004229548.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
 gi|323384397|gb|ADX56488.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
          Length = 414

 Score =  195 bits (496), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 279 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYA 338

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 339 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 398

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 399 ETRVIEYQTGGALTWE 414


>gi|325272776|ref|ZP_08139120.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
 gi|324102083|gb|EGB99585.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
          Length = 416

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|104780527|ref|YP_607025.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           entomophila L48]
 gi|95109514|emb|CAK14215.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           entomophila L48]
          Length = 415

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|170720377|ref|YP_001748065.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida W619]
 gi|169758380|gb|ACA71696.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida W619]
          Length = 416

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|26987912|ref|NP_743337.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida KT2440]
 gi|167035231|ref|YP_001670462.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida GB-1]
 gi|24982621|gb|AAN66801.1|AE016309_3 ribonucleoside reductase, beta subunit [Pseudomonas putida KT2440]
 gi|166861719|gb|ABZ00127.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida GB-1]
 gi|313497534|gb|ADR58900.1| NrdB [Pseudomonas putida BIRD-1]
          Length = 416

 Score =  195 bits (495), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|312795100|ref|YP_004028022.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           rhizoxinica HKI 454]
 gi|312166875|emb|CBW73878.1| Ribonucleoside-diphosphate reductase beta chain (EC 1.17.4.1)
           [Burkholderia rhizoxinica HKI 454]
          Length = 416

 Score =  195 bits (495), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT  F+++   +   A  LE  YA
Sbjct: 281 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTPAFREEICGLFKHAVELEYRYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 341 EDTMPRGVLGLNAGMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 401 ETRVIEYQTGGALSWE 416


>gi|254429337|ref|ZP_05043044.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
 gi|196195506|gb|EDX90465.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
          Length = 355

 Score =  194 bits (493), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+H+NFGIDVINQIK+ENPHLW  + + K+  M+ E   LEI YA
Sbjct: 220 MTGVAEQFQYILRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGAELEIQYA 279

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFIANRR  Q+GL   FK   NPFPWMSE++DL+KEKNFF
Sbjct: 280 RDTMPRGVLGMNAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFF 339

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L W+
Sbjct: 340 ETRVTEYQVGGALSWE 355


>gi|119713586|gb|ABL97637.1| ribonucleotide-diphosphate reductase beta subunit [uncultured
           marine bacterium EB0_39H12]
          Length = 412

 Score =  194 bits (493), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGID+INQIK+ENPHLW ++ + ++  M+ E T LEI YA
Sbjct: 277 MTGTAEQFQYILRDESMHLNFGIDMINQIKLENPHLWDEQMRHEAAQMILEGTELEIQYA 336

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFIANRR  QIGLE  F+   NPFPWMSE++DL+KEKNFF
Sbjct: 337 RDTMPRGILGMNAGMMEEYLQFIANRRLVQIGLEEEFEGASNPFPWMSEIMDLRKEKNFF 396

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 397 ETRVIEYQTGGALTWD 412


>gi|327480258|gb|AEA83568.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri DSM 4166]
          Length = 415

 Score =  194 bits (492), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA
Sbjct: 280 MTGTAEQFQYILRDESMHLNFGIDMINQIKIENPHLWNAEMKDEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|262373382|ref|ZP_06066661.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
 gi|262313407|gb|EEY94492.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
          Length = 427

 Score =  194 bits (492), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|330504346|ref|YP_004381215.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
 gi|328918632|gb|AEB59463.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
          Length = 416

 Score =  194 bits (492), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA
Sbjct: 281 MTGTAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|146308172|ref|YP_001188637.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina ymp]
 gi|145576373|gb|ABP85905.1| Ribonucleoside-diphosphate reductase [Pseudomonas mendocina ymp]
          Length = 416

 Score =  194 bits (492), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA
Sbjct: 281 MTGTAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|15596352|ref|NP_249846.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAO1]
 gi|107100605|ref|ZP_01364523.1| hypothetical protein PaerPA_01001630 [Pseudomonas aeruginosa PACS2]
 gi|116049087|ref|YP_792111.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|152988648|ref|YP_001349579.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PA7]
 gi|218892881|ref|YP_002441750.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa LESB58]
 gi|254239525|ref|ZP_04932847.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|296390475|ref|ZP_06879950.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAb1]
 gi|313106126|ref|ZP_07792381.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
 gi|9947077|gb|AAG04544.1|AE004545_7 NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa PAO1]
 gi|115584308|gb|ABJ10323.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126192903|gb|EAZ56966.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|150963806|gb|ABR85831.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa PA7]
 gi|187939552|gb|ACD38699.1| ribonucleoside reductase small chain [Pseudomonas aeruginosa]
 gi|218773109|emb|CAW28921.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa LESB58]
 gi|310878883|gb|EFQ37477.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
          Length = 415

 Score =  194 bits (492), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA
Sbjct: 280 MTGTAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|293609145|ref|ZP_06691448.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
 gi|292829718|gb|EFF88080.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
          Length = 427

 Score =  194 bits (492), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|146282010|ref|YP_001172163.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri A1501]
 gi|145570215|gb|ABP79321.1| ribonucleoside reductase, small chain [Pseudomonas stutzeri A1501]
          Length = 415

 Score =  193 bits (491), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA
Sbjct: 280 MTGTAEQFQYILRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNASMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|260551040|ref|ZP_05825245.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
 gi|260405988|gb|EEW99475.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
          Length = 427

 Score =  193 bits (491), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|169797064|ref|YP_001714857.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AYE]
 gi|213156529|ref|YP_002318190.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|215484526|ref|YP_002326761.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|239501302|ref|ZP_04660612.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
 gi|260555643|ref|ZP_05827863.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
 gi|294839369|ref|ZP_06784052.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6013113]
 gi|294859388|ref|ZP_06797157.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6013150]
 gi|301345633|ref|ZP_07226374.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB056]
 gi|301512780|ref|ZP_07238017.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB058]
 gi|301596291|ref|ZP_07241299.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB059]
 gi|169149991|emb|CAM87885.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AYE]
 gi|193076530|gb|ABO11186.2| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           baumannii ATCC 17978]
 gi|213055689|gb|ACJ40591.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|213987168|gb|ACJ57467.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|260410554|gb|EEX03852.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
          Length = 427

 Score =  193 bits (491), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|184157022|ref|YP_001845361.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ACICU]
 gi|183208616|gb|ACC56014.1| Ribonucleotide reductase, beta subunit [Acinetobacter baumannii
           ACICU]
          Length = 427

 Score =  193 bits (491), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|169634186|ref|YP_001707922.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii SDF]
 gi|169152978|emb|CAP02026.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii]
          Length = 427

 Score =  193 bits (491), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|255318309|ref|ZP_05359544.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262379054|ref|ZP_06072210.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
 gi|255304621|gb|EET83803.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262298511|gb|EEY86424.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
          Length = 427

 Score =  193 bits (491), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 108/135 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEIIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR +Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNAAMMEEYLKFICNRRLNQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|325121074|gb|ADY80597.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 370

 Score =  193 bits (490), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 236 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYA 295

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 296 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 355

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 356 ETRVTDYQTGGALSW 370


>gi|294339031|emb|CAZ87378.1| putative Ribonucleoside-diphosphate reductase (ribonucleoside
           diphosphate reductase, beta subunit) [Thiomonas sp. 3As]
          Length = 410

 Score =  193 bits (490), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID++NQIK+ENPHLWT EF+++   + H+A  LE  YA
Sbjct: 275 MTGAAEQYQYILRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYA 334

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FIANRR  QIGL+ +F   ENPFPWMSE+IDLKKE+NFF
Sbjct: 335 EDTMPRGVLGLNASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFF 394

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 395 ETRVIEYQSGGALSWE 410


>gi|34497739|ref|NP_901954.1| ribonucleotide-diphosphate reductase subunit beta [Chromobacterium
           violaceum ATCC 12472]
 gi|34103595|gb|AAQ59956.1| ribonucleoside-diphosphate reductase system [Chromobacterium
           violaceum ATCC 12472]
          Length = 360

 Score =  193 bits (490), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN IK+ENP LWT  F+ +   +  +A  LE AYA
Sbjct: 225 MTGAAEQYQYILRDESMHCNFGIDLINTIKLENPLLWTDSFKAEIVDLFKQAVELEYAYA 284

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y++FIANRR  QIGL+PLF    NPFPWMSE+IDLKKEKNFF
Sbjct: 285 EDTMPRGVLGLNASMFKEYLRFIANRRMQQIGLDPLFPGVNNPFPWMSEMIDLKKEKNFF 344

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 345 ETRVTEYQTGGALSWD 360


>gi|296135014|ref|YP_003642256.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
 gi|295795136|gb|ADG29926.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
          Length = 402

 Score =  193 bits (490), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID++NQIK+ENPHLWT EF+++   + H+A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FIANRR  QIGL+ +F   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 387 ETRVIEYQSGGALSWE 402


>gi|299533977|ref|ZP_07047329.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
 gi|298717886|gb|EFI58891.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
          Length = 363

 Score =  193 bits (490), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +  +A  LE  YA
Sbjct: 228 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYA 287

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 288 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFF 347

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 348 ETRVIEYQTGGALSWD 363


>gi|91787004|ref|YP_547956.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas sp.
           JS666]
 gi|91696229|gb|ABE43058.1| Ribonucleoside-diphosphate reductase [Polaromonas sp. JS666]
          Length = 406

 Score =  193 bits (490), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA
Sbjct: 271 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFLKAVELEYRYA 330

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 331 EDTMPRGVLGLNASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFF 390

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 391 ETRVIEYQSGGALSWD 406


>gi|119478322|ref|ZP_01618353.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
 gi|119448662|gb|EAW29907.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
          Length = 422

 Score =  192 bits (489), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 84/136 (61%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENP LW+++FQQ+   M+ E T LEI YA
Sbjct: 287 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPQLWSEKFQQEIIQMILEGTQLEIEYA 346

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            ++MP+G +G+NA   E+Y+QFI+NRR +Q+GL   ++  +NPFPWMSE++DL+KEKNFF
Sbjct: 347 RDSMPRGVLGMNAAMMEEYLQFISNRRLNQLGLPEQYQGAQNPFPWMSEIMDLRKEKNFF 406

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 407 ETRVIEYQTGGALNWE 422


>gi|126640804|ref|YP_001083788.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ATCC 17978]
 gi|322506921|gb|ADX02375.1| nrdB [Acinetobacter baumannii 1656-2]
 gi|323516789|gb|ADX91170.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 361

 Score =  192 bits (489), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 227 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 286

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 287 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 346

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 347 ETRVTDYQTGGALSW 361


>gi|262280153|ref|ZP_06057938.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
 gi|262260504|gb|EEY79237.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
          Length = 427

 Score =  192 bits (489), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 86/135 (63%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLW+ EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|221065168|ref|ZP_03541273.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
 gi|220710191|gb|EED65559.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
          Length = 363

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +   A  LE  YA
Sbjct: 228 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQRAVELEYRYA 287

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 288 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFF 347

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 348 ETRVIEYQTGGALSWD 363


>gi|224825450|ref|ZP_03698555.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
 gi|224602371|gb|EEG08549.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
          Length = 360

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN +K ENP LWT+EF+ +   +   A  LE AYA
Sbjct: 225 MTGAAEQYQYILRDESMHCNFGIDLINTVKQENPQLWTEEFKAEITGLFKHAVELEYAYA 284

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y++FIANRR  QIGLEP+F    NPFPWMSE+IDLKKEKNFF
Sbjct: 285 EDTMPRGVLGLNAAMFKEYLRFIANRRMQQIGLEPMFPGVTNPFPWMSEMIDLKKEKNFF 344

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 345 ETRVTEYQTGGALSWD 360


>gi|255019430|ref|ZP_05291537.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254971128|gb|EET28583.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 345

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG AEQYQYI+RDES+H NFGID+INQIK+ENP LWT+ FQQ+   ++ +   LE AYA
Sbjct: 209 MVGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTEGFQQEIVGLIRQGVELECAYA 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  ++Y+++I NRR  QIGL+P ++  +NPFPWMSE++DLKKEKNFF
Sbjct: 269 DDTMPRGILGLNAPMFKEYVRYIGNRRLSQIGLKPQWENVQNPFPWMSEMMDLKKEKNFF 328

Query: 121 ETRVTEYQQGAGLKWD 136
           E+RVT+YQ G  L WD
Sbjct: 329 ESRVTDYQTGGALSWD 344


>gi|326315613|ref|YP_004233285.1| ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372449|gb|ADX44718.1| Ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 387

 Score =  192 bits (488), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+++ + +  +A  LE  YA
Sbjct: 252 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYA 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 312 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFF 371

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 372 ETRVIEYQSGGALSWD 387


>gi|299771426|ref|YP_003733452.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
 gi|298701514|gb|ADI92079.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
          Length = 427

 Score =  192 bits (488), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 86/135 (63%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLW+ EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|88812072|ref|ZP_01127324.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
 gi|88790576|gb|EAR21691.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
          Length = 370

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGIDVINQIK ENPHLWT EFQ  ++  + E+  LE+ YA
Sbjct: 235 MTGTAEQFQYILRDESIHLNFGIDVINQIKQENPHLWTAEFQATAQRTILESMALEVDYA 294

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +T+P+G +GLNA   E+Y++FI NRR  QIGL   F   ENP PWMSE++DLKKEKNFF
Sbjct: 295 RDTLPRGVLGLNAAMIEEYLRFITNRRLAQIGLTEAFPGAENPLPWMSELVDLKKEKNFF 354

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEY+ G  L W+
Sbjct: 355 ETRVTEYRTGGALSWE 370


>gi|120609557|ref|YP_969235.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           citrulli AAC00-1]
 gi|120588021|gb|ABM31461.1| Ribonucleoside-diphosphate reductase [Acidovorax citrulli AAC00-1]
          Length = 387

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+++ + +  +A  LE  YA
Sbjct: 252 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYA 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 312 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFF 371

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 372 ETRVIEYQSGGALSWD 387


>gi|121595925|ref|YP_987821.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax sp.
           JS42]
 gi|222112113|ref|YP_002554377.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           ebreus TPSY]
 gi|120608005|gb|ABM43745.1| Ribonucleoside-diphosphate reductase [Acidovorax sp. JS42]
 gi|221731557|gb|ACM34377.1| Ribonucleoside-diphosphate reductase [Acidovorax ebreus TPSY]
          Length = 396

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA
Sbjct: 261 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKDEIKALFIKAVELEYRYA 320

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 321 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFF 380

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 381 ETRVIEYQSGGALSWD 396


>gi|332039867|gb|EGI76262.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella
           gracilis ATCC 19624]
          Length = 399

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 264 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTPEFKAEIRGLFEKAVELEYRYA 323

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 324 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFF 383

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 384 ETRVIEYQSGGALSWD 399


>gi|264680215|ref|YP_003280125.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
 gi|262210731|gb|ACY34829.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
          Length = 336

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +  +A  LE  YA
Sbjct: 201 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYA 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 261 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFF 320

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 321 ETRVIEYQTGGALSWD 336


>gi|124268397|ref|YP_001022401.1| ribonucleotide-diphosphate reductase subunit beta [Methylibium
           petroleiphilum PM1]
 gi|124261172|gb|ABM96166.1| Ribonucleoside-diphosphate reductase [Methylibium petroleiphilum
           PM1]
          Length = 403

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + + +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFKAEIKALFMKAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 388 ETRVIEYQSGGALSWD 403


>gi|226945386|ref|YP_002800459.1| ribonucleotide-diphosphate reductase subunit beta [Azotobacter
           vinelandii DJ]
 gi|226720313|gb|ACO79484.1| Ribonucleoside-diphosphate reductase beta subunit [Azotobacter
           vinelandii DJ]
          Length = 416

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA
Sbjct: 281 MTGTAEQFQYILRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  Q+GL   +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNATMMEDYLKFIANRRLSQLGLPEQYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|241764092|ref|ZP_04762129.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
 gi|241366556|gb|EER61044.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
          Length = 398

 Score =  191 bits (486), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +   A  LE  YA
Sbjct: 263 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFMRAVELEYRYA 322

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 323 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFF 382

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 383 ETRVIEYQSGGALSWD 398


>gi|158341282|ref|YP_001522354.1| ribonucleotide-diphosphate reductase subunit beta [Acaryochloris
           marina MBIC11017]
 gi|158311523|gb|ABW33134.1| ribonucleoside-diphosphate reductase, beta subunit [Acaryochloris
           marina MBIC11017]
          Length = 384

 Score =  191 bits (485), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID++N IK ENPHLWT EF ++ R +   A  LE  YA
Sbjct: 249 MTGAAEQYQYILRDESMHCNFGIDLVNAIKQENPHLWTPEFCEEIRDLFKRAVELEYRYA 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+++IANRR  QIGL+P+F   ENPFPWMSE++DLKKE+NFF
Sbjct: 309 EDTMPRGVLGLNASMFKSYLRYIANRRSQQIGLDPIFASEENPFPWMSEMVDLKKERNFF 368

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 369 ETRVLEYQTGGALSWD 384


>gi|50083944|ref|YP_045454.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. ADP1]
 gi|49529920|emb|CAG67632.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           sp. ADP1]
          Length = 427

 Score =  191 bits (485), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 85/135 (62%), Positives = 108/135 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++EQ+QYI+RDES+H+NFGID+INQIKIENPHLWT EFQQ+   M+ E TLLEI YA
Sbjct: 293 MNGVSEQFQYILRDESMHVNFGIDMINQIKIENPHLWTAEFQQEVIQMIVEGTLLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   ++   NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNAAMMEEYLKFICNRRLAQLGLPEQYRGVNNPFQWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|313200886|ref|YP_004039544.1| ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
 gi|312440202|gb|ADQ84308.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
          Length = 381

 Score =  191 bits (485), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 84/136 (61%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A  LE  YA
Sbjct: 246 MQGAAEQYQYILRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYA 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y++FIANRR  QIG++ L+    NPFPWMSE++DLKKEKNFF
Sbjct: 306 EDTMPRGVLGLNAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFF 365

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 366 ETRVTEYQTGGALSWD 381


>gi|253998799|ref|YP_003050862.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
 gi|253985478|gb|ACT50335.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
          Length = 383

 Score =  191 bits (484), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 84/136 (61%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A  LE  YA
Sbjct: 248 MQGAAEQYQYILRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYA 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y++FIANRR  QIG++ L+    NPFPWMSE++DLKKEKNFF
Sbjct: 308 EDTMPRGVLGLNAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFF 367

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 368 ETRVTEYQTGGALSWD 383


>gi|145588393|ref|YP_001154990.1| ribonucleotide-diphosphate reductase subunit beta [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046799|gb|ABP33426.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 394

 Score =  191 bits (484), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 84/136 (61%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT  F+ + +++  +A  LE  YA
Sbjct: 259 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTSAFKDEIKSIFEKAVELEYRYA 318

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y+++I NRRC QIGL+ +F   ENPFPWMSE+IDLKKE+NFF
Sbjct: 319 EDTMPRGVLGLNAPMFKGYLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFF 378

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 379 ETRVIEYQTGGALSWE 394


>gi|294840478|ref|ZP_06785161.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6014059]
          Length = 427

 Score =  191 bits (484), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 86/135 (63%), Positives = 106/135 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMS ++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSGMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|89902117|ref|YP_524588.1| ribonucleotide-diphosphate reductase subunit beta [Rhodoferax
           ferrireducens T118]
 gi|89346854|gb|ABD71057.1| Ribonucleoside-diphosphate reductase [Rhodoferax ferrireducens
           T118]
          Length = 400

 Score =  190 bits (483), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENP LWT EF+ + + +  +A  LE  YA
Sbjct: 265 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPQLWTSEFKAEIKALFEQAVELEYRYA 324

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 325 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFF 384

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 385 ETRVIEYQSGGALSWD 400


>gi|212212091|ref|YP_002303027.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuG_Q212]
 gi|212010501|gb|ACJ17882.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuG_Q212]
          Length = 401

 Score =  190 bits (483), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA
Sbjct: 265 MTGTSEQFQYILRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYA 324

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFF
Sbjct: 325 KDTMPRGILGLNANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFF 384

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  LKWD
Sbjct: 385 ETRVIEYQAGGTLKWD 400


>gi|226953559|ref|ZP_03824023.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|294649451|ref|ZP_06726876.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226835696|gb|EEH68079.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|292824656|gb|EFF83434.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 427

 Score =  190 bits (482), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 86/135 (63%), Positives = 106/135 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT  FQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTATFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLAQLGLPEQFAGVTNPFQWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|29654845|ref|NP_820537.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 493]
 gi|154705923|ref|YP_001423853.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii Dugway 5J108-111]
 gi|161831080|ref|YP_001597389.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 331]
 gi|29542113|gb|AAO91051.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           RSA 493]
 gi|154355209|gb|ABS76671.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           Dugway 5J108-111]
 gi|161762947|gb|ABX78589.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 331]
          Length = 401

 Score =  190 bits (482), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA
Sbjct: 265 MTGTSEQFQYILRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYA 324

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFF
Sbjct: 325 KDTMPRGILGLNANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFF 384

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  LKWD
Sbjct: 385 ETRVIEYQAGGTLKWD 400


>gi|153208286|ref|ZP_01946665.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165919229|ref|ZP_02219315.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212219268|ref|YP_002306055.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuK_Q154]
 gi|120576070|gb|EAX32694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165917090|gb|EDR35694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212013530|gb|ACJ20910.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuK_Q154]
          Length = 401

 Score =  190 bits (482), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 88/136 (64%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA
Sbjct: 265 MTGTSEQFQYILRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYA 324

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFF
Sbjct: 325 KDTMPRGILGLNANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFF 384

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  LKWD
Sbjct: 385 ETRVIEYQAGGTLKWD 400


>gi|52842002|ref|YP_095801.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52629113|gb|AAU27854.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 381

 Score =  189 bits (481), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA
Sbjct: 244 MVGTSEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYA 303

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +G+NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFF
Sbjct: 304 RDTMPHGILGMNAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFF 363

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 364 ETRVIEYQAGGTLSWD 379


>gi|332110818|gb|EGJ10995.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax
           benzoatilyticus JA2]
          Length = 385

 Score =  189 bits (481), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 103/136 (75%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT  F+ + R +   A  LE  YA
Sbjct: 250 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTPAFKAEIRALFERAVELEYRYA 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 310 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFF 369

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV +YQ G  L WD
Sbjct: 370 ETRVIDYQSGGALSWD 385


>gi|121606275|ref|YP_983604.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas
           naphthalenivorans CJ2]
 gi|120595244|gb|ABM38683.1| Ribonucleoside-diphosphate reductase [Polaromonas naphthalenivorans
           CJ2]
          Length = 387

 Score =  189 bits (481), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENP LWT EF+ +   +  +A  LE  YA
Sbjct: 252 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPQLWTAEFKAEINALFMKAVELEYRYA 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 312 EDTMPRGVLGLNASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFF 371

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 372 ETRVIEYQSGGALSWD 387


>gi|148359319|ref|YP_001250526.1| ribonucleoside-diphosphate reductase subunit beta [Legionella
           pneumophila str. Corby]
 gi|296107366|ref|YP_003619066.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148281092|gb|ABQ55180.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila str. Corby]
 gi|295649267|gb|ADG25114.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|307610475|emb|CBX00047.1| hypothetical protein LPW_18021 [Legionella pneumophila 130b]
          Length = 367

 Score =  189 bits (481), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA
Sbjct: 230 MVGTSEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYA 289

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +G+NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFF
Sbjct: 290 RDTMPHGILGMNAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFF 349

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 350 ETRVIEYQAGGTLSWD 365


>gi|54294662|ref|YP_127077.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Lens]
 gi|53754494|emb|CAH15978.1| hypothetical protein lpl1739 [Legionella pneumophila str. Lens]
          Length = 367

 Score =  189 bits (480), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA
Sbjct: 230 MVGTSEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYA 289

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +G+NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFF
Sbjct: 290 RDTMPHGILGMNAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFF 349

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 350 ETRVIEYQAGGTLSWD 365


>gi|54297688|ref|YP_124057.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Paris]
 gi|53751473|emb|CAH12891.1| hypothetical protein lpp1739 [Legionella pneumophila str. Paris]
          Length = 367

 Score =  189 bits (480), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA
Sbjct: 230 MVGTSEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYA 289

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +G+NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFF
Sbjct: 290 RDTMPHGILGMNAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFF 349

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 350 ETRVIEYQAGGTLSWD 365


>gi|262376783|ref|ZP_06070011.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
 gi|262308493|gb|EEY89628.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
          Length = 427

 Score =  189 bits (480), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 86/135 (63%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENP LWT EFQ++   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPGLWTTEFQEEIIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FIANRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNAGMMEEYLKFIANRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|171057074|ref|YP_001789423.1| ribonucleotide-diphosphate reductase subunit beta [Leptothrix
           cholodnii SP-6]
 gi|170774519|gb|ACB32658.1| Ribonucleoside-diphosphate reductase [Leptothrix cholodnii SP-6]
          Length = 402

 Score =  189 bits (479), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN IK+ENPHLWT  F+ + + +  +A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESMHCNFGIDLINAIKLENPHLWTPAFKAEIKALFLKAVELEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 387 ETRVIEYQSGGALSWD 402


>gi|239813962|ref|YP_002942872.1| ribonucleotide-diphosphate reductase subunit beta [Variovorax
           paradoxus S110]
 gi|239800539|gb|ACS17606.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus S110]
          Length = 391

 Score =  189 bits (479), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENP LWT EF+ + + +  +A  LE  YA
Sbjct: 256 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKALFLKAVELEYKYA 315

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 316 EDTMPRGVLGMNASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFF 375

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 376 ETRVIEYQSGGALSWD 391


>gi|319791701|ref|YP_004153341.1| ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
 gi|315594164|gb|ADU35230.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
          Length = 411

 Score =  188 bits (478), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENP LWT EF+ + + +   A  LE  YA
Sbjct: 276 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKDLFMRAVELEYKYA 335

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 336 EDTMPRGVLGMNASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFF 395

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 396 ETRVIEYQSGGALSWD 411


>gi|254496936|ref|ZP_05109775.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
 gi|254353845|gb|EET12541.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
          Length = 369

 Score =  188 bits (477), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+++   ++ +   +E  YA
Sbjct: 229 MVGTSEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPEFKEEIIQLIKDGVAMEYQYA 288

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +G+NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFF
Sbjct: 289 KDTMPHGILGMNAEMFEEYLHFIANRRLNQIGLPEQYPGAENPFPWMSEMMDLKKEKNFF 348

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 349 ETRVIEYQAGGTLSWD 364


>gi|160896947|ref|YP_001562529.1| ribonucleotide-diphosphate reductase subunit beta [Delftia
           acidovorans SPH-1]
 gi|160362531|gb|ABX34144.1| Ribonucleoside-diphosphate reductase [Delftia acidovorans SPH-1]
          Length = 363

 Score =  188 bits (477), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENP LWT EF+++   +  +A  LE  YA
Sbjct: 228 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPQLWTPEFKEEITALFVKAVELEYRYA 287

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 288 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFF 347

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 348 ETRVIEYQTGGALSWD 363


>gi|262369327|ref|ZP_06062655.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
 gi|262315395|gb|EEY96434.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
          Length = 427

 Score =  188 bits (477), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 85/135 (62%), Positives = 106/135 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENP LWT EFQ++   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPSLWTAEFQEEIIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNAAMMEEYLKFICNRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|255019898|ref|ZP_05291973.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970678|gb|EET28165.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 374

 Score =  187 bits (475), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 84/136 (61%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG AEQYQYI+RDES+H NFGID+INQIK+ENP LWT+ FQ++  +++ +   LE AYA
Sbjct: 239 MVGAAEQYQYILRDESMHCNFGIDLINQIKVENPDLWTEPFQEEIVSLIRKGVELECAYA 298

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFF
Sbjct: 299 DDTMPRGVLGLNAPIFKDYVKYIGNRRLQQLGLPVQWAGIQNPFPWMSEMMDLKKEKNFF 358

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 359 ETRVTEYQTGGALSWD 374


>gi|270156779|ref|ZP_06185436.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|289164772|ref|YP_003454910.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           longbeachae NSW150]
 gi|269988804|gb|EEZ95058.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|288857945|emb|CBJ11805.1| putative ribonucleoside-diphosphate reductase, beta subunit
           [Legionella longbeachae NSW150]
          Length = 366

 Score =  187 bits (474), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+++   ++ +   LE  YA
Sbjct: 229 MVGTSEQFQYILRDESMHMNFGIDVINQIKIENPHLWTSEFKEEIIQLIRQGVDLEYQYA 288

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+ FIANRR  QIGL   +    NPFPWMSE++DLKKEKNFF
Sbjct: 289 KDTMPQGILGMNAEMFEEYLHFIANRRLTQIGLAEQYPGAVNPFPWMSEMMDLKKEKNFF 348

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 349 ETRVIEYQAGGTLSWD 364


>gi|171463021|ref|YP_001797134.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192559|gb|ACB43520.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 394

 Score =  185 bits (470), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 82/136 (60%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LW   F+ + +++  +A  LE  YA
Sbjct: 259 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWISAFKDEIKSIFEKAVELEYRYA 318

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  +  +++I NRRC QIGL+ +F   ENPFPWMSE+IDLKKE+NFF
Sbjct: 319 EDTMPRGVLGLNAPMFKGCLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFF 378

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 379 ETRVIEYQTGGALSWE 394


>gi|319764328|ref|YP_004128265.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|330826374|ref|YP_004389677.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
 gi|317118889|gb|ADV01378.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|329311746|gb|AEB86161.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
          Length = 396

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 83/136 (61%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENP LWT  F+ + + +  +A  LE  YA
Sbjct: 261 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPQLWTPAFKDEIKGLFLKAVDLEYRYA 320

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 321 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLDALFPNEENPFPWMSEMIDLKKERNFF 380

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 381 ETRVIEYQTGGALSWD 396


>gi|218665361|ref|YP_002427016.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218517574|gb|ACK78160.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 380

 Score =  184 bits (467), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 83/136 (61%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG AEQYQYI+RDES+H NFGID+ NQIK+ENP LWT+ FQQ+   ++     LE AYA
Sbjct: 245 MVGAAEQYQYILRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYA 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP   +Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFF
Sbjct: 305 DDTMPRGVLGLNAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFF 364

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L W+
Sbjct: 365 ETRVTEYQTGGALSWE 380


>gi|198284354|ref|YP_002220675.1| ribonucleotide-diphosphate reductase subunit beta
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198248875|gb|ACH84468.1| Ribonucleoside-diphosphate reductase [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 374

 Score =  184 bits (467), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 83/136 (61%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG AEQYQYI+RDES+H NFGID+ NQIK+ENP LWT+ FQQ+   ++     LE AYA
Sbjct: 239 MVGAAEQYQYILRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYA 298

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP   +Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFF
Sbjct: 299 DDTMPRGVLGLNAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFF 358

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L W+
Sbjct: 359 ETRVTEYQTGGALSWE 374


>gi|149927167|ref|ZP_01915424.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
 gi|149824106|gb|EDM83327.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
          Length = 399

 Score =  184 bits (466), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 82/136 (60%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G AEQ+QYI+RDES H  FGID+IN +K+ENPHLWT EF+++ + M  +A  LE AYA
Sbjct: 264 MIGAAEQFQYILRDESAHCTFGIDLINTVKLENPHLWTPEFKEEIKAMFRKAVELEHAYA 323

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLN+    +YM+FI NRR +QIGL  L++   NPFPWMSE++DLKKE NFF
Sbjct: 324 VDTMPRGVLGLNSAQFMEYMKFICNRRSNQIGLGTLYEGATNPFPWMSEMMDLKKETNFF 383

Query: 121 ETRVTEYQQGAGLKWD 136
           E RVTEYQ G  L WD
Sbjct: 384 ERRVTEYQTGGALSWD 399


>gi|160871658|ref|ZP_02061790.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
 gi|159120457|gb|EDP45795.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
          Length = 362

 Score =  184 bits (466), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 101/136 (74%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT EF++    ++ E   LE  YA
Sbjct: 226 MTGTAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTPEFKRYVINLIKEGVDLEYQYA 285

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +T+P+G +GLNA     Y++FI NRR  QIGL   +    NP PWMSE+IDLKKEKNFF
Sbjct: 286 LDTLPRGILGLNANLMWDYLRFIGNRRFTQIGLAEQYPGVSNPLPWMSEIIDLKKEKNFF 345

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 346 ETRVTEYQTGGSLNWD 361


>gi|268316001|ref|YP_003289720.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
 gi|262333535|gb|ACY47332.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
          Length = 347

 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 83/136 (61%), Positives = 108/136 (79%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN IK ENP LWT EFQ++ + ++ EA  LE+AYA
Sbjct: 212 MTGIGEQFQYILRDETIHLNFGIDLINGIKAENPELWTPEFQREVQQLIEEAVELEVAYA 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           ++ +P+G +GL AP   +Y+Q+IA+RR  +IGL+  +  ++NPFPWMSE IDL KEKNFF
Sbjct: 272 YDCLPRGVLGLTAPMFREYVQYIADRRLERIGLKARYG-SKNPFPWMSETIDLLKEKNFF 330

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQQ A L WD
Sbjct: 331 ETRVTEYQQAAALSWD 346


>gi|121608466|ref|YP_996273.1| ribonucleotide-diphosphate reductase subunit beta
           [Verminephrobacter eiseniae EF01-2]
 gi|121553106|gb|ABM57255.1| Ribonucleoside-diphosphate reductase [Verminephrobacter eiseniae
           EF01-2]
          Length = 399

 Score =  182 bits (461), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 84/136 (61%), Positives = 101/136 (74%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT  F+ +   +  +A  LE  YA
Sbjct: 264 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPLLWTTAFKAEIEALFLQAVELEYRYA 323

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +G+NA   + Y+++IANRR  QIGLE LF    NPFPWMSE+IDLKKE+NFF
Sbjct: 324 EDTMPHGVLGMNASMFKGYLRYIANRRATQIGLETLFPQETNPFPWMSEMIDLKKERNFF 383

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 384 ETRVIEYQSGGALCWD 399


>gi|15834835|ref|NP_296594.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270285001|ref|ZP_06194395.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270289024|ref|ZP_06195326.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Weiss]
 gi|301336399|ref|ZP_07224601.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum MopnTet14]
 gi|14195147|sp|Q9PL92|RIR2_CHLMU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|7190253|gb|AAF39087.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydia
           muridarum Nigg]
          Length = 346

 Score =  176 bits (446), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 82/135 (60%), Positives = 102/135 (75%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGI EQYQYI+RDE++HLNFG+D+IN IK ENP +WT E QQ+   M+  A  LEI YA
Sbjct: 213 MVGIGEQYQYILRDETIHLNFGVDLINGIKEENPEIWTTELQQEIIEMIQRAVDLEIDYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFF
Sbjct: 273 RDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ  A L W
Sbjct: 332 ETRVTEYQHAASLTW 346


>gi|298243909|ref|ZP_06967716.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
 gi|297556963|gb|EFH90827.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
          Length = 361

 Score =  175 bits (443), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/136 (58%), Positives = 103/136 (75%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ EQ+QYI+RDE++HLNFGID+IN IK ENP LWT EFQ     ++  A  LEIAYA
Sbjct: 227 MTGVGEQFQYILRDETIHLNFGIDLINGIKAENPELWTTEFQAHIYDLIKRAVELEIAYA 286

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           ++ +P G +GLNA S   Y+Q +A+RR  +IGL P+F ++ +PFPWMSE +DL KEKNFF
Sbjct: 287 YDCLPNGILGLNAESFRSYVQHVADRRLERIGLAPIF-HSSHPFPWMSETMDLSKEKNFF 345

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ  + L+W+
Sbjct: 346 ETRVTEYQAASTLEWE 361


>gi|166154172|ref|YP_001654290.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 434/Bu]
 gi|166155047|ref|YP_001653302.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
 gi|301335416|ref|ZP_07223660.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2tet1]
 gi|165930160|emb|CAP03644.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis 434/Bu]
 gi|165931035|emb|CAP06598.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
          Length = 346

 Score =  174 bits (441), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 102/135 (75%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA
Sbjct: 213 MIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFF
Sbjct: 273 QDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ  A L W
Sbjct: 332 ETRVTEYQHAASLTW 346


>gi|282890382|ref|ZP_06298910.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499764|gb|EFB42055.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 350

 Score =  174 bits (440), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 82/135 (60%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDES+HLNFGID+IN IK ENP +WT EF+ +   M+ EA  LEI YA
Sbjct: 217 MTGIGEQFQYILRDESIHLNFGIDLINTIKEENPEVWTPEFKDQIIDMVKEAVELEIQYA 276

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P G +GLNA     Y+ +IA+RR  +IGL+P +  T NPFPWMSEV+DL KEKNFF
Sbjct: 277 ADCLPNGILGLNAALFRDYVGYIADRRLERIGLKPQYN-TANPFPWMSEVMDLDKEKNFF 335

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ GA L W
Sbjct: 336 ETRVTQYQSGAALVW 350


>gi|112489977|pdb|2ANI|A Chain A, Crystal Structure Of The F127y Mutant Of Ribonucleotide
           Reductase R2 From Chlamydia Trachomatis
          Length = 346

 Score =  172 bits (436), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 80/135 (59%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA
Sbjct: 213 MIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFF
Sbjct: 273 QDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ  A L W
Sbjct: 332 ETRVIEYQHAASLTW 346


>gi|15605563|ref|NP_220349.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D/UW-3/CX]
 gi|255311668|ref|ZP_05354238.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276]
 gi|255317969|ref|ZP_05359215.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276s]
 gi|14195107|sp|O84835|RIR2_CHLTR RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|51247460|pdb|1SYY|A Chain A, Crystal Structure Of The R2 Subunit Of Ribonucleotide
           Reductase From Chlamydia Trachomatis
 gi|3329298|gb|AAC68425.1| Ribonucleoside Reductase, Small Chain [Chlamydia trachomatis
           D/UW-3/CX]
 gi|296436383|gb|ADH18557.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9768]
 gi|296437314|gb|ADH19484.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11222]
 gi|296438242|gb|ADH20403.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11074]
 gi|297140743|gb|ADH97501.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9301]
 gi|297748957|gb|ADI51503.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-EC]
 gi|297749837|gb|ADI52515.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-LC]
          Length = 346

 Score =  172 bits (436), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 80/135 (59%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA
Sbjct: 213 MIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFF
Sbjct: 273 QDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ  A L W
Sbjct: 332 ETRVIEYQHAASLTW 346


>gi|76789573|ref|YP_328659.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis A/HAR-13]
 gi|237803260|ref|YP_002888454.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/Jali20/OT]
 gi|237805181|ref|YP_002889335.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|255349232|ref|ZP_05381239.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70]
 gi|255503769|ref|ZP_05382159.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70s]
 gi|255507450|ref|ZP_05383089.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D(s)2923]
 gi|76168103|gb|AAX51111.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis A/HAR-13]
 gi|231273481|emb|CAX10397.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|231274494|emb|CAX11290.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/Jali20/OT]
 gi|289525874|emb|CBJ15356.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis Sweden2]
 gi|296435459|gb|ADH17637.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/150]
 gi|296439176|gb|ADH21329.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/11023]
          Length = 346

 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/135 (59%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA
Sbjct: 213 MIGIGEQYQYILRDETIHLNFGIDLINGIKEENPGIWTPELQQEIVELIKRAVDLEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFF
Sbjct: 273 QDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ  A L W
Sbjct: 332 ETRVIEYQHAASLTW 346


>gi|283779060|ref|YP_003369815.1| ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
 gi|283437513|gb|ADB15955.1| Ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
          Length = 357

 Score =  170 bits (431), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 78/136 (57%), Positives = 100/136 (73%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN ++ ENP +WT +FQ++   ++ EA  LE+AYA
Sbjct: 223 MTGIGEQFQYILRDETIHLNFGIDLINGVRAENPGIWTADFQERVIKLVREAVELEVAYA 282

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G VGLN      Y+Q IA+RR  +IGL P    + NPFPWMSE +DL KEKNFF
Sbjct: 283 WDCLPRGIVGLNGELFRDYVQHIADRRLERIGL-PTQYGSANPFPWMSETMDLGKEKNFF 341

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ  A L WD
Sbjct: 342 ETRVTEYQSAASLAWD 357


>gi|297621807|ref|YP_003709944.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
 gi|297377108|gb|ADI38938.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
          Length = 344

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 77/136 (56%), Positives = 101/136 (74%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN IK ENP +W ++   +   ++ +A  LEIAYA
Sbjct: 210 MPGIGEQFQYILRDETIHLNFGIDLINGIKAENPEIWNEDLTDEINGLVQQAVELEIAYA 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +GLNA    +Y+Q++A+RR  +IGL  ++K + NPFPWMSE +DL KEKNFF
Sbjct: 270 KECLPHGVLGLNAGLFVEYVQYVADRRLERIGLSAIYK-SSNPFPWMSETMDLTKEKNFF 328

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ  A L WD
Sbjct: 329 ETRVTEYQSAAVLSWD 344


>gi|325110864|ref|YP_004271932.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
 gi|324971132|gb|ADY61910.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
          Length = 353

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 79/136 (58%), Positives = 100/136 (73%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + GI EQ+QYI+RDE+ HLNFGID+IN IK ENP +WT++FQQ+   ++ EA  LEI YA
Sbjct: 219 LTGIGEQFQYILRDETTHLNFGIDLINGIKHENPDIWTEKFQQEIIDLVKEAVELEIDYA 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GLN      Y+Q IA+RR  +IGL  L+  + NPFPWMSE +DL KEKNFF
Sbjct: 279 RDCLPRGVLGLNGNLFRDYVQHIADRRLERIGLPTLYN-SSNPFPWMSETMDLAKEKNFF 337

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 338 ETRVTEYQTGGTLSWD 353


>gi|330443801|ref|YP_004376787.1| ribonucleoside-diphosphate reductase subunit beta [Chlamydophila
           pecorum E58]
 gi|328806911|gb|AEB41084.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pecorum E58]
          Length = 346

 Score =  169 bits (427), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 77/135 (57%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +W+KE Q++   ++  A  LEI YA
Sbjct: 213 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWSKELQEEIIALIETAVGLEIDYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +PKG +GL +     Y++ IA+RR  +IGL+P++  ++NPFPWMSE +DL KEKNFF
Sbjct: 273 KDCLPKGILGLKSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETMDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ  A L W
Sbjct: 332 ETRVTEYQTAASLSW 346


>gi|189219089|ref|YP_001939730.1| ribonucleotide-diphosphate reductase subunit beta
           [Methylacidiphilum infernorum V4]
 gi|189185947|gb|ACD83132.1| Ribonucleotide reductase, beta subunit [Methylacidiphilum
           infernorum V4]
          Length = 361

 Score =  168 bits (426), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 76/135 (56%), Positives = 103/135 (76%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN I+ ENP +WT  FQ++   M+ E+  LE AYA
Sbjct: 228 MTGIGEQFQYILRDETIHLNFGIDLINGIREENPEIWTAGFQKEIEEMIDESVRLEYAYA 287

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GLN+   + Y+++IA+RR  +IG +  +  ++NPFPWMSEV+DL KEKNFF
Sbjct: 288 RDCLPRGILGLNSALFKDYVEYIADRRLERIGFKAKYG-SKNPFPWMSEVMDLVKEKNFF 346

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ GA L W
Sbjct: 347 ETRVTEYQSGAVLNW 361


>gi|29840533|ref|NP_829639.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           caviae GPIC]
 gi|29834882|gb|AAP05517.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           caviae GPIC]
          Length = 346

 Score =  168 bits (425), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 76/135 (56%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +W++E Q +   ++ +A  LEI YA
Sbjct: 213 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWSQELQDEIIALIQKAVDLEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL +     Y++ IA+RR  +IGL+P++ Y++NPFPWMSE IDL KEKNFF
Sbjct: 273 KDCLPRGILGLKSSMFIDYVRHIADRRLERIGLKPIY-YSKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ    L W
Sbjct: 332 ETRVTEYQTSGNLSW 346


>gi|62185356|ref|YP_220141.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           abortus S26/3]
 gi|62148423|emb|CAH64191.1| putative ibonucleoside reductase small subunit [Chlamydophila
           abortus S26/3]
          Length = 349

 Score =  167 bits (423), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 77/135 (57%), Positives = 100/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA
Sbjct: 216 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYA 275

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFF
Sbjct: 276 RDCLPRGILGLKASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFF 334

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ  A L W
Sbjct: 335 ETRVIEYQTAANLSW 349


>gi|313848275|emb|CBY17276.1| putative ibonucleoside reductase small subunit [Chlamydophila
           psittaci RD1]
          Length = 349

 Score =  167 bits (423), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 77/135 (57%), Positives = 100/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA
Sbjct: 216 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYA 275

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFF
Sbjct: 276 RDCLPRGILGLKASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFF 334

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ  A L W
Sbjct: 335 ETRVIEYQTAANLSW 349


>gi|329943118|ref|ZP_08291892.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|325507260|gb|ADZ18898.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC]
 gi|328814665|gb|EGF84655.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|328914953|gb|AEB55786.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           psittaci 6BC]
          Length = 346

 Score =  167 bits (423), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 77/135 (57%), Positives = 100/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA
Sbjct: 213 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFF
Sbjct: 273 RDCLPRGILGLKASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ  A L W
Sbjct: 332 ETRVIEYQTAANLSW 346


>gi|89898045|ref|YP_515155.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           felis Fe/C-56]
 gi|89331417|dbj|BAE81010.1| ribonucleoside-diphosphate reductase beta chain [Chlamydophila
           felis Fe/C-56]
          Length = 349

 Score =  166 bits (421), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 75/135 (55%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +W+++ Q +   ++ +A  LEI YA
Sbjct: 216 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWSQQLQDEIVDLIQKAVDLEIEYA 275

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL +     Y++ IA+RR  +IGL+P++  ++NPFPWMSE IDL KEKNFF
Sbjct: 276 RDCLPRGILGLRSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETIDLNKEKNFF 334

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ  A L W
Sbjct: 335 ETRVTEYQTAANLNW 349


>gi|159899093|ref|YP_001545340.1| ribonucleotide-diphosphate reductase subunit beta [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159892132|gb|ABX05212.1| Ribonucleoside-diphosphate reductase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 342

 Score =  166 bits (420), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 76/136 (55%), Positives = 100/136 (73%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + GI EQ QYI+RDE++HLNFG+D+IN IK ENP +WT EFQ +   ++ ++  LE  YA
Sbjct: 208 LTGIGEQIQYILRDETIHLNFGVDLINGIKAENPAIWTNEFQAEIVQLIRQSVELEAQYA 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P+G +GL+A     Y+Q+IA+RR  +IGL   +  ++NPFPWMSE IDL KEKNFF
Sbjct: 268 AECLPRGVMGLHAAMFRDYVQYIADRRLQRIGLAIQYG-SQNPFPWMSETIDLTKEKNFF 326

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ  A L+WD
Sbjct: 327 ETRVTEYQSAASLEWD 342


>gi|33242353|ref|NP_877294.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae TW-183]
 gi|33236864|gb|AAP98951.1| ribonucleoside reductase small chain [Chlamydophila pneumoniae
           TW-183]
          Length = 365

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 75/135 (55%), Positives = 100/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E Q++   ++ +A  LEI YA
Sbjct: 232 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYA 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL +     Y++ IA+RR  +IGL+P++ ++ NPFPWMSE +DL KEKNFF
Sbjct: 292 KDCLPRGILGLRSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFF 350

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ    L W
Sbjct: 351 ETRVTEYQTAGNLSW 365


>gi|15618893|ref|NP_225179.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae CWL029]
 gi|15836516|ref|NP_301040.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae J138]
 gi|16752043|ref|NP_445409.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae AR39]
 gi|14195165|sp|Q9Z6S4|RIR2_CHLPN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4377313|gb|AAD19122.1| Ribonucleoside Reductase, Small Chain [Chlamydophila pneumoniae
           CWL029]
 gi|7189783|gb|AAF38660.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae AR39]
 gi|8979358|dbj|BAA99192.1| ribonucleoside reductase, small chain [Chlamydophila pneumoniae
           J138]
 gi|269302786|gb|ACZ32886.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae LPCoLN]
          Length = 346

 Score =  166 bits (419), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 75/135 (55%), Positives = 100/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E Q++   ++ +A  LEI YA
Sbjct: 213 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL +     Y++ IA+RR  +IGL+P++ ++ NPFPWMSE +DL KEKNFF
Sbjct: 273 KDCLPRGILGLRSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ    L W
Sbjct: 332 ETRVTEYQTAGNLSW 346


>gi|149173739|ref|ZP_01852368.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
 gi|148847269|gb|EDL61603.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
          Length = 359

 Score =  164 bits (414), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 80/136 (58%), Positives = 95/136 (69%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN IK ENP LWT EFQQ     +  A  LEI YA
Sbjct: 225 MTGIGEQFQYILRDETIHLNFGIDLINGIKQENPDLWTPEFQQLIIDRMKYAAELEIEYA 284

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P G +GLN     +Y+Q IA+RR  +IGL P    + NPFPWMSE +DL KEKNFF
Sbjct: 285 KDCLPTGILGLNGELFREYVQHIADRRLERIGL-PAQYGSANPFPWMSETMDLSKEKNFF 343

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ    L WD
Sbjct: 344 ETRVTEYQSSGSLNWD 359


>gi|269839640|ref|YP_003324332.1| ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791370|gb|ACZ43510.1| Ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 353

 Score =  163 bits (412), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 78/136 (57%), Positives = 98/136 (72%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN IK ENP  WT+E ++    M+ +A   EIAYA
Sbjct: 219 MTGIGEQFQYILRDETVHLNFGIDLINTIKEENPEAWTEELRRDLVGMIRQAVEYEIAYA 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +GLNA    +Y+Q+IA+RR  +I L P+   + NPFPWMSE +DL KEKNFF
Sbjct: 279 RECLPNGVLGLNADLFREYVQYIADRRLERIEL-PVQYRSRNPFPWMSETMDLPKEKNFF 337

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ    L WD
Sbjct: 338 ETRVTEYQNAGTLVWD 353


>gi|300709535|ref|YP_003735349.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
 gi|299123218|gb|ADJ13557.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
          Length = 330

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 69/135 (51%), Positives = 97/135 (71%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG+ EQ++YIMRDESLHLNFG+D+IN ++ EN  +WT  F+ +   +L EA  LE  YA
Sbjct: 197 MVGVGEQFEYIMRDESLHLNFGVDLINTVREENSGIWTDVFEAEIEGLLREAVELERTYA 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E  P+  +G+      +Y++++A+RR  Q+G+EP++  T+NPFPWM+E +DL KEKNFF
Sbjct: 257 REACPEEVLGMGPAQFAEYVEYVADRRLDQLGMEPVYD-TDNPFPWMAEQVDLNKEKNFF 315

Query: 121 ETRVTEYQQGAGLKW 135
           ET V EYQ G  L+W
Sbjct: 316 ETNVAEYQSGGSLEW 330


>gi|313117005|ref|YP_004038129.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
 gi|312294957|gb|ADQ68993.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
          Length = 330

 Score =  157 bits (396), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 70/135 (51%), Positives = 95/135 (70%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGI +Q++YIMRDESLH+ FG+D+INQI+ ENP  WT EF  + R ++ +A  LE  YA
Sbjct: 197 MVGIGQQFEYIMRDESLHVGFGVDLINQIRAENPDAWTDEFGAEVRDLIEKAVDLEQIYA 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E  P   +G++     +Y++ +A+RR  Q+ L+  +  T+NPFPWMSE +DL KEKNFF
Sbjct: 257 REACPDDVLGMSPDQFAEYVEHVADRRLGQLDLDASYG-TDNPFPWMSEAVDLNKEKNFF 315

Query: 121 ETRVTEYQQGAGLKW 135
           ET+VTEYQ G  L W
Sbjct: 316 ETQVTEYQSGGSLDW 330


>gi|15791173|ref|NP_280997.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           sp. NRC-1]
 gi|169236929|ref|YP_001690129.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           salinarum R1]
 gi|10581791|gb|AAG20477.1| ribonucleoside reductase small chain [Halobacterium sp. NRC-1]
 gi|167727995|emb|CAP14783.1| ribonucleoside-diphosphate reductase beta subunit [Halobacterium
           salinarum R1]
          Length = 331

 Score =  156 bits (395), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 65/136 (47%), Positives = 99/136 (72%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG+ EQ++YIMRDESLHLNFG+D+INQI+ E+P +WT +F+ +  +++ +A  LE  YA
Sbjct: 197 MVGVGEQFEYIMRDESLHLNFGVDLINQIRDEHPDVWTADFEAEVNSLMRDAVDLEQLYA 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +  P   +G+++     Y++++A+RR  Q+ ++P++  T+NPFPWM+E +DL  E NFF
Sbjct: 257 RDACPDDLLGMSSEQFADYVEYVADRRFQQLRMDPVYG-TDNPFPWMTEQVDLNTETNFF 315

Query: 121 ETRVTEYQQGAGLKWD 136
           E  V+EYQQG  L WD
Sbjct: 316 ERNVSEYQQGGSLDWD 331


>gi|257053403|ref|YP_003131236.1| ribonucleotide-diphosphate reductase subunit beta [Halorhabdus
           utahensis DSM 12940]
 gi|256692166|gb|ACV12503.1| Ribonucleoside-diphosphate reductase [Halorhabdus utahensis DSM
           12940]
          Length = 330

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 71/135 (52%), Positives = 96/135 (71%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGI +Q++YIMRDESLH+ FG+D+I+QI+ ENP +WT EF  +   ++ EA  LE  YA
Sbjct: 197 MVGIGQQFEYIMRDESLHVGFGVDLIDQIRTENPGVWTDEFDSEVIDLIKEAVELEQIYA 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E  P+  +G++      Y+++IA+RR  Q+ L   +  TENPFPWMSE +DL KEKNFF
Sbjct: 257 REACPEEILGMSGSQFADYVEYIADRRLDQLDLPEQYG-TENPFPWMSEQVDLNKEKNFF 315

Query: 121 ETRVTEYQQGAGLKW 135
           ET+VTEYQ G  L+W
Sbjct: 316 ETQVTEYQSGGSLEW 330


>gi|322368525|ref|ZP_08043093.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
 gi|320551809|gb|EFW93455.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
          Length = 330

 Score =  151 bits (382), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/135 (51%), Positives = 95/135 (70%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGI +Q++YI+RDESLH+ FG+D+IN+I+ ENP+ WT  F  +   ++  A  LE  YA
Sbjct: 197 MVGIGQQFEYILRDESLHVGFGVDLINEIRAENPNAWTDAFGDEVTDLITNAVELEKIYA 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           +E  P   +G++A    +Y++ IA+RR  Q+ L+  +  TENPFPWMSE +DL KEKNFF
Sbjct: 257 YEACPDEILGMSAAQFAEYVEHIADRRLAQLDLDEQYG-TENPFPWMSEQVDLNKEKNFF 315

Query: 121 ETRVTEYQQGAGLKW 135
           ET+VTEYQ G  L W
Sbjct: 316 ETQVTEYQSGGSLDW 330


>gi|289582310|ref|YP_003480776.1| ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
 gi|289531863|gb|ADD06214.1| Ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
          Length = 330

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 70/135 (51%), Positives = 96/135 (71%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGI +Q++YIMRDESLH+ FG+D+I+QI++ENP +WT  F  +   ++ EA  LE  YA
Sbjct: 197 MVGIGQQFEYIMRDESLHVGFGVDLIDQIRMENPDVWTDAFGDEVVELITEAVELEKIYA 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           +E  P   +G++A    +Y++ IA+RR  Q+ L P    T+NPFPW+SE +DL KEKNFF
Sbjct: 257 YEACPDEILGMSADQFAEYVEHIADRRLGQLDL-PTQYGTDNPFPWLSEQVDLNKEKNFF 315

Query: 121 ETRVTEYQQGAGLKW 135
           ET+VTEYQ G  L W
Sbjct: 316 ETQVTEYQSGGSLDW 330


>gi|330941350|gb|EGH44202.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 109

 Score =  147 bits (371), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 66/109 (60%), Positives = 82/109 (75%)

Query: 28  QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRR 87
           QIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+NA   E Y++FIANRR
Sbjct: 1   QIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRR 60

Query: 88  CHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGLKWD 136
             QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G  L WD
Sbjct: 61  LSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD 109


>gi|118500933|gb|ABK97635.1| ribonucleoside diphosphate reductase beta subunit [Allochromatium
           vinosum DSM 180]
          Length = 280

 Score =  136 bits (343), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 62/92 (67%), Positives = 74/92 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT +F+Q+   M+ EA  LE  YA
Sbjct: 189 MTGTAEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPDFRQELVGMIREAVELEARYA 248

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIG 92
           H+TMP+G +GLNA   E Y+ FIANRRC QIG
Sbjct: 249 HDTMPRGVLGLNAQMFEDYLHFIANRRCAQIG 280


>gi|291336894|gb|ADD96423.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C426]
          Length = 147

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 90/134 (67%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+++Q +Y +RDESLH+NFG  +IN +K + P +WTK+F++++   + +A  LEI YAH+
Sbjct: 13  GLSDQIRYTLRDESLHINFGTYLINTLKEQYPTIWTKKFEEETIEHIKKAVQLEINYAHD 72

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P+G +GLNA     YM +I NRR   IGL+  F+   NPFPW+SEV+D     NFFE 
Sbjct: 73  VLPRGILGLNADMFVDYMHYIGNRRLEGIGLDYRFESDTNPFPWLSEVVDTGAMTNFFER 132

Query: 123 RVTEYQQGAGLKWD 136
           +V +YQ    L+ D
Sbjct: 133 KVKDYQNSGVLEDD 146


>gi|284043177|ref|YP_003393517.1| ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
 gi|283947398|gb|ADB50142.1| Ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
          Length = 364

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 86/131 (65%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI   ++Y +RDES H+     ++ ++  ENP +WT EF+ + R ++ EA  LE  +  +
Sbjct: 226 GIGTMFRYTLRDESNHIELFRRLLRELVAENPEIWTAEFRDELRELMREAVALEQRFIDD 285

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   VGLNA    QY+ +IA+RR   +GLEPL    ENP PW++E++D++KE+NFFE 
Sbjct: 286 CLPVEGVGLNADEFAQYIDYIADRRLEGVGLEPLKPGVENPLPWLAELMDVRKEQNFFEG 345

Query: 123 RVTEYQQGAGL 133
           RVTEYQ+ + L
Sbjct: 346 RVTEYQKASAL 356


>gi|153875510|ref|ZP_02003277.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
 gi|152068026|gb|EDN66723.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
          Length = 374

 Score =  123 bits (309), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 86/133 (64%), Gaps = 2/133 (1%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
           A+QY YI RDE+LH + G+ +I QI  EN  LW    Q++SR ++ EA  LE  YAH +M
Sbjct: 243 AQQYSYIWRDENLHSSNGLWLIKQIIQENHELWDSTMQERSRAIVSEAVKLETDYAHASM 302

Query: 65  PK-GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
           P+ G VGL   +  ++  F+A+  C  +G++PLF+  E+P PW+SE  +L  E NFFE R
Sbjct: 303 PEGGIVGLPVKTYIKFSHFVADNICKNLGIKPLFRVREHPMPWISEY-ELNHEVNFFEGR 361

Query: 124 VTEYQQGAGLKWD 136
           V EYQ G+ L WD
Sbjct: 362 VREYQTGSQLTWD 374


>gi|294055010|ref|YP_003548668.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614343|gb|ADE54498.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
          Length = 360

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 56/131 (42%), Positives = 87/131 (66%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI + ++Y +RDES H+    ++I  +  EN  +WT EF+++ R ++ EA  LE  +  +
Sbjct: 222 GIGQMFRYTLRDESNHIEVFRNLIMDLIEENEDVWTPEFREELRDLMREAVTLEKDFIRD 281

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   VGL+A    QY+ +IA+RR   +GL PL    +NPFPW++E++D+KKE+NFFE 
Sbjct: 282 CLPVNSVGLSADEFCQYIDYIADRRLEGVGLAPLSPGVDNPFPWLAEMMDIKKEQNFFEG 341

Query: 123 RVTEYQQGAGL 133
           RVTEYQ+ + L
Sbjct: 342 RVTEYQKASAL 352


>gi|241589542|ref|YP_002979567.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|240868254|gb|ACS65913.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
          Length = 328

 Score =  120 bits (301), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 54/88 (61%), Positives = 67/88 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 222 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKVEITELFKQAVDLEYRYA 281

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRC 88
            +TMP+G +GLNA   + Y++FI NRRC
Sbjct: 282 EDTMPRGVLGLNASMFKGYLRFICNRRC 309


>gi|254442775|ref|ZP_05056251.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
 gi|198257083|gb|EDY81391.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
          Length = 361

 Score =  117 bits (293), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 54/132 (40%), Positives = 82/132 (62%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI E ++Y +RDES H+    ++   +  ENP +WT EF+ + R  + EA  LE  +  +
Sbjct: 223 GIGEMFRYTLRDESNHIELLRNLFMDLIEENPDVWTPEFKAELRDAMSEAIALEKEFIAD 282

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +GL      QY+ +IA+RR    GL+PL     NP PW++E++D+KKE+NFFE 
Sbjct: 283 CLPVDSIGLRKEDFVQYIDYIADRRLEGCGLDPLTPGVTNPLPWLAEMMDIKKEQNFFEG 342

Query: 123 RVTEYQQGAGLK 134
           RVTEYQ+ + L+
Sbjct: 343 RVTEYQKASSLE 354


>gi|94986920|ref|YP_594853.1| ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731169|emb|CAJ54531.1| Ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 333

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/137 (48%), Positives = 83/137 (60%), Gaps = 5/137 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G AEQ+QYI+RDE LH  FGI VI   I+ EN  L     +Q    +  E    EIAY
Sbjct: 201 MKGTAEQFQYILRDEVLHCTFGITVIKGLIEEENITLDPTAVRQ----LWDEVEAAEIAY 256

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
           A+  + +  +G NA       +FIANRR  Q+G++  F   +N  PW+ E  +L+KEKNF
Sbjct: 257 ANYILHEPIIGYNADLHIGQFRFIANRRSRQLGMKEPFPGAKNVLPWLDEQSNLRKEKNF 316

Query: 120 FETRVTEYQQGAGLKWD 136
           FETRVTEYQ G GLKWD
Sbjct: 317 FETRVTEYQTGGGLKWD 333


>gi|196233679|ref|ZP_03132520.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
 gi|196222349|gb|EDY16878.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
          Length = 390

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/134 (41%), Positives = 78/134 (58%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI + +QY +RDES H+  G  ++ Q+  ENP +WT EF+ +    + E   LE  + 
Sbjct: 249 MTGIGQMFQYTLRDESNHIELGRYILTQLIAENPDIWTPEFRAELVEFMREGVELEKEFV 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+  VG+       Y+++ A+RR   + L  L     NPF W+ EVI L+KEKNFF
Sbjct: 309 RDCLPEDGVGMTQADFLTYVEYNADRRLAGLDLPALSGVKTNPFAWLDEVIFLRKEKNFF 368

Query: 121 ETRVTEYQQGAGLK 134
           ETRVTEYQ    LK
Sbjct: 369 ETRVTEYQTSGSLK 382


>gi|330949820|gb|EGH50080.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae Cit 7]
          Length = 359

 Score =  114 bits (284), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 49/80 (61%), Positives = 64/80 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKKEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYM 80
            +TMP+G +G+NA   E Y+
Sbjct: 340 RDTMPRGVLGMNAAMMEDYL 359


>gi|254492407|ref|ZP_05105579.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxidans DMS010]
 gi|224462299|gb|EEF78576.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxydans DMS010]
          Length = 383

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/137 (46%), Positives = 78/137 (56%), Gaps = 5/137 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G AEQ QYIMRDE +H +FGI V  QI K EN  L  K+ QQ    M  EA   E  Y
Sbjct: 251 MKGTAEQLQYIMRDEVMHASFGIRVCKQIMKEENITLDPKKVQQ----MFEEADAAEETY 306

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
           A   +    +G +        ++ ANRR  Q+G E  F   E   PW+ E  +++KEKNF
Sbjct: 307 AGYILRDPILGYSKEVHHGQFRYTANRRAKQLGFEEPFPGAEATLPWLDEQANMRKEKNF 366

Query: 120 FETRVTEYQQGAGLKWD 136
           FET+VTEYQ G GLKWD
Sbjct: 367 FETKVTEYQTGGGLKWD 383


>gi|90023100|ref|YP_528927.1| amino acid adenylation [Saccharophagus degradans 2-40]
 gi|89952700|gb|ABD82715.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 368

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/136 (46%), Positives = 81/136 (59%), Gaps = 4/136 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ QYIMRDE++H  FGI  ++QI IEN    T       +TM  EA   E  YA
Sbjct: 237 MKGTAEQLQYIMRDETMHCAFGIQTVSQIIIENC---TNIDVDAIKTMWEEADEAEANYA 293

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              + +  +G +A    +  +FIANRR  Q+GLE  F   +   PW+ E  +++KEKNFF
Sbjct: 294 RYILREPILGYSANDHIEQFRFIANRRARQLGLEEPFPQAKCALPWLDEQANIRKEKNFF 353

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G GL+WD
Sbjct: 354 ETRVIEYQAG-GLEWD 368


>gi|149375674|ref|ZP_01893443.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
 gi|149360076|gb|EDM48531.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
          Length = 352

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 61/136 (44%), Positives = 81/136 (59%), Gaps = 5/136 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G  EQ QYI+RDE++H +FG+ V+NQI + EN  L  K      R M  E+   E AY
Sbjct: 221 MRGTGEQLQYILRDEAMHFSFGLKVVNQILEEENITLDPKAV----RDMWDESEAAETAY 276

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
           A+  +    +G +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNF
Sbjct: 277 ANYILRDPILGYSAQYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNF 336

Query: 120 FETRVTEYQQGAGLKW 135
           FETRV EYQ GA L+W
Sbjct: 337 FETRVIEYQTGAQLEW 352


>gi|225164890|ref|ZP_03727109.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
 gi|224800504|gb|EEG18881.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
          Length = 362

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 82/132 (62%), Gaps = 1/132 (0%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI + ++Y +RDES H+    +++  +  ENP +WT  F+++ R  + EA  LE  +  +
Sbjct: 223 GIGQMFRYTLRDESNHIEVFRNLLMDLVEENPEIWTPGFKEELRETMREAVTLEKEFIRD 282

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNFFE 121
            +P   VGL       Y+ +IA+RR   +GL P+     +NP PW++E++D+KKE+NFFE
Sbjct: 283 CLPVNAVGLAVDEFLTYIDYIADRRLEGVGLAPISATPIKNPLPWLAEMMDIKKEQNFFE 342

Query: 122 TRVTEYQQGAGL 133
            RVTEYQ+ + L
Sbjct: 343 GRVTEYQKASSL 354


>gi|87311395|ref|ZP_01093515.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
 gi|87285807|gb|EAQ77721.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
          Length = 313

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 66/93 (70%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN IK ENP LWT EFQ +   ++ +A  LEI YA
Sbjct: 218 MTGIGEQFQYILRDETVHLNFGIDLINGIKAENPDLWTAEFQAEIIDLIKQAVELEIEYA 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGL 93
            + +P G +GLN      Y+ ++A+RR  +IGL
Sbjct: 278 GDCLPNGILGLNRDLFRDYVHYVADRRVERIGL 310


>gi|311696539|gb|ADP99412.1| ribonucleotide-diphosphate reductase beta subunit [marine bacterium
           HP15]
          Length = 352

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 82/136 (60%), Gaps = 5/136 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKS-RTMLHEATLLEIAY 59
           M G  EQ QYI+RDE++H +FG+ V+NQI +E  ++    F  K+ R M  E+   E AY
Sbjct: 221 MRGTGEQLQYILRDEAMHFSFGLKVVNQI-VEEENI---TFDPKAVREMWDESEAAEKAY 276

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
           A   +    +G +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNF
Sbjct: 277 ADYILRDPILGYSAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNF 336

Query: 120 FETRVTEYQQGAGLKW 135
           FETRV EYQ GA L+W
Sbjct: 337 FETRVIEYQTGAQLEW 352


>gi|120556760|ref|YP_961111.1| ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
 gi|120326609|gb|ABM20924.1| Ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
          Length = 352

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 79/135 (58%), Gaps = 3/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  EQ QYI+RDE++H +FG+ V+NQI  E          +  R M  E+   E+AYA
Sbjct: 221 MRGTGEQLQYILRDEAMHFSFGLKVVNQILEEEKITLDP---KAVREMWDESEAAEMAYA 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           +  +    +G +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNFF
Sbjct: 278 NYVLRDPILGYSAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFF 337

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ GA L+W
Sbjct: 338 ETRVIEYQTGAQLEW 352


>gi|171913278|ref|ZP_02928748.1| ribonucleotide-diphosphate reductase subunit beta [Verrucomicrobium
           spinosum DSM 4136]
          Length = 361

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 79/131 (60%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI   ++Y +RDES H+    ++   +  ENP +WT EF+++   ++ EA  LE  +  +
Sbjct: 223 GIGTMFRYTLRDESNHIKVFRNLFMDLIDENPEIWTPEFREELVELMKEAVALEKEFIRD 282

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   VGL A   E Y+ FIA+RR   +GL  L     NP PW++E+ D++KE+NFFE 
Sbjct: 283 CLPVAAVGLTAGEFELYIDFIADRRLASVGLPALTPGIVNPLPWLAEMQDIRKEQNFFEG 342

Query: 123 RVTEYQQGAGL 133
            VT+YQ+ + L
Sbjct: 343 TVTDYQKASSL 353


>gi|83649535|ref|YP_437970.1| ribonucleotide reductase subunit beta [Hahella chejuensis KCTC
           2396]
 gi|83637578|gb|ABC33545.1| Ribonucleotide reductase, beta subunit [Hahella chejuensis KCTC
           2396]
          Length = 405

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/136 (45%), Positives = 77/136 (56%), Gaps = 5/136 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G  EQ QYIMRDE +H  FGI V+ QI K E   L  K      +T+  EA   E  Y
Sbjct: 274 MKGTGEQLQYIMRDEVMHCAFGIRVVKQIIKEEGVTLDPKAI----KTLWEEAEAAETGY 329

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
           AH  + +  +G  A    +  +FIANRR  Q+ L+  F    N  PW+ E   ++KEKNF
Sbjct: 330 AHFLLKEPILGYTAEDHIEQFRFIANRRAKQLKLDEPFPGAGNALPWLDEQASMRKEKNF 389

Query: 120 FETRVTEYQQGAGLKW 135
           FETRVTEYQ GA L+W
Sbjct: 390 FETRVTEYQTGASLQW 405


>gi|88856487|ref|ZP_01131145.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
 gi|88814354|gb|EAR24218.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
          Length = 332

 Score =  107 bits (268), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 79/124 (63%), Gaps = 1/124 (0%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
            +++RDESLHL FGI++I  +  ENP + T+EF  + R M+ +A  +E AY H+ +P G 
Sbjct: 202 DWVVRDESLHLKFGINLILTVLEENPEIQTEEFADEIRQMILDAVEMEEAYNHDLLPGGI 261

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           +GLNA    QY++++A+RR  ++G EP +K T NP  WM+   D  +  NFFE+  T Y+
Sbjct: 262 LGLNANYINQYVKYLADRRLEELGFEPHYKVT-NPAKWMATANDTLELVNFFESTNTSYE 320

Query: 129 QGAG 132
             A 
Sbjct: 321 ANAS 324


>gi|254449372|ref|ZP_05062814.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
 gi|198261018|gb|EDY85321.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
          Length = 404

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 75/135 (55%), Gaps = 3/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ QYIMRDE +H +FG+ V  QI  E      +   +  R M  E    E  YA
Sbjct: 273 MKGTAEQLQYIMRDEVMHASFGLRVARQIMREEN---IQPDPKAMREMWDECEAAEEGYA 329

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +    +G +A       +FIANRR +++ LE  F   EN  PW+ E  +++KEKNFF
Sbjct: 330 RYLLRDPILGYSAEDHVNQFRFIANRRANKLSLEEPFPGAENALPWLDEQANMRKEKNFF 389

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ G GL W
Sbjct: 390 ETRVTEYQVGGGLTW 404


>gi|117928932|ref|YP_873483.1| ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
 gi|117649395|gb|ABK53497.1| Ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
          Length = 348

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 80/130 (61%), Gaps = 2/130 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DVI+ ++ E P L+  E  +++R ML EA   E  +A +
Sbjct: 212 GLASGTNWVFRDESMHMAFAFDVIDTVRREEPELFDDELARQAREMLAEAVDCETQFAED 271

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  G++      Y++ +A+RRC Q+GLEP++  + NPF +M E+ D+++  NFFE 
Sbjct: 272 LLGQGVPGMSLADMRSYLEHVADRRCVQLGLEPIYG-SPNPFTFM-ELQDVQELSNFFER 329

Query: 123 RVTEYQQGAG 132
           RV  YQ G  
Sbjct: 330 RVAAYQIGVS 339


>gi|330467634|ref|YP_004405377.1| ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
 gi|328810605|gb|AEB44777.1| Ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
          Length = 342

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 79/128 (61%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DV++ ++ E P L+  E +Q+ R ML EA   E+ +A +
Sbjct: 206 GLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDAEMEQQVRDMLAEAVDCEVQFAAD 265

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  G+      QY+Q +A+RR   +G+ P++  T NPF +M E+ D+++  NFFE 
Sbjct: 266 LLEQGVSGMPLADMRQYLQHVADRRLAMLGIAPMYGST-NPFAFM-ELQDVQELSNFFER 323

Query: 123 RVTEYQQG 130
           RV+ YQ G
Sbjct: 324 RVSAYQVG 331


>gi|238061574|ref|ZP_04606283.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
 gi|237883385|gb|EEP72213.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
          Length = 344

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 79/128 (61%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DV++ ++ E P L+  E  ++ R ML EA   E  +A +
Sbjct: 208 GLASGTNWVFRDESMHMAFAFDVVDTVRHEEPDLFDDELARQVREMLAEAVECEAQFAED 267

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  GL+     QY+Q +A+RR  Q+G+ PL+  + NPF +M E+ D+++  NFFE 
Sbjct: 268 LLEQGVSGLSLDDMRQYLQHVADRRLAQLGIAPLYG-SANPFAFM-ELQDVQELSNFFER 325

Query: 123 RVTEYQQG 130
           RV+ YQ G
Sbjct: 326 RVSAYQVG 333


>gi|126664354|ref|ZP_01735338.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
 gi|126630680|gb|EBA01294.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
          Length = 352

 Score =  102 bits (253), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 81/136 (59%), Gaps = 5/136 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKS-RTMLHEATLLEIAY 59
           M G  EQ+QYI+RDE++H +FG+ V+NQI +E  ++    F  K+ R M  E+   E  Y
Sbjct: 221 MRGTGEQFQYILRDEAMHFSFGLKVVNQI-LEEENI---SFDPKAVRDMWDESEAAESDY 276

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
           A+  +    +G +A    +  +F+ANRR   + L   F   +N  PW+ E   ++KEKNF
Sbjct: 277 ANYILRDPILGYSAEYHIEQFRFVANRRARTVNLPEPFPGAKNVSPWLEEQATMRKEKNF 336

Query: 120 FETRVTEYQQGAGLKW 135
           FETRV EYQ GA L+W
Sbjct: 337 FETRVIEYQTGAQLEW 352


>gi|256391238|ref|YP_003112802.1| ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
 gi|256357464|gb|ACU70961.1| Ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
          Length = 331

 Score =  100 bits (248), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 2/130 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DV++ ++ E P L+ ++  Q+ R ML EA   E  +A +
Sbjct: 195 GLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDEKMAQQVREMLAEAVECETQFAGD 254

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL       Y++ +A+RR  Q+GLEP++  T NP  +M E+ D+++  NFFE 
Sbjct: 255 LLGGGVSGLPVADMRAYLEHVADRRLEQLGLEPMYG-TANPLGFM-ELQDVQELSNFFER 312

Query: 123 RVTEYQQGAG 132
           RV+ YQ   G
Sbjct: 313 RVSAYQVAVG 322


>gi|148273612|ref|YP_001223173.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|170782700|ref|YP_001711034.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|147831542|emb|CAN02508.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|169157270|emb|CAQ02455.1| ribonucleoside-diphosphate reductase beta subunit [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 331

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
            +I+RDESLHL FGI++I  +  ENP L T+EF  + + M+ +A  +E  Y  + +P G 
Sbjct: 203 DWIVRDESLHLKFGINLILTVLEENPDLQTEEFAAEIKQMILDAVEMEEQYNRDLLPNGI 262

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           +GLNA    QY++++A+RR  ++G E  +K + NP  WM+   D  +  NFFE+  T Y+
Sbjct: 263 LGLNANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLQLVNFFESTNTSYE 321

Query: 129 QGAG 132
             A 
Sbjct: 322 SNAS 325


>gi|145596896|ref|YP_001161193.1| ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
 gi|145306233|gb|ABP56815.1| Ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
          Length = 350

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 80/130 (61%), Gaps = 2/130 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DV++ ++ E P L+  + +++ + M+ EA   E+ +A +
Sbjct: 214 GLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDADLERQVKEMVAEAVDCEVQFAED 273

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  GL+     +Y+Q +A+RR   +G+ P++  + NPF +M E+ D+++  NFFE 
Sbjct: 274 LLEQGVSGLSLADMREYLQHVADRRLVTLGIAPMYG-SANPFAFM-ELQDVQELSNFFER 331

Query: 123 RVTEYQQGAG 132
           RV+ YQ G  
Sbjct: 332 RVSAYQMGVS 341


>gi|302867100|ref|YP_003835737.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315506490|ref|YP_004085377.1| ribonucleotide reductase [Micromonospora sp. L5]
 gi|302569959|gb|ADL46161.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315413109|gb|ADU11226.1| ribonucleotide reductase [Micromonospora sp. L5]
          Length = 342

 Score = 97.8 bits (242), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 80/128 (62%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DV+  ++ E P L+  E +++ + ML EA   E+++A +
Sbjct: 206 GLASGTNWVFRDESMHMAFAFDVVETVRAEEPDLFDDEMERQVKEMLAEAVECEVSFAED 265

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  G++     +Y+Q +A+RR   +G+ P++  + NPF +M E+ D+++  NFFE 
Sbjct: 266 LLGQGVPGMSLADMREYLQHVADRRLAVLGIAPMYG-SGNPFAFM-ELQDVQELSNFFER 323

Query: 123 RVTEYQQG 130
           RV+ YQ G
Sbjct: 324 RVSAYQVG 331


>gi|28493649|ref|NP_787810.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei str. Twist]
 gi|28572842|ref|NP_789622.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei TW08/27]
 gi|28410975|emb|CAD67360.1| ribonucleotide-diphosphate reductase small chain [Tropheryma
           whipplei TW08/27]
 gi|28476691|gb|AAO44779.1| ribonucleotide reductase beta chain [Tropheryma whipplei str.
           Twist]
          Length = 327

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 1/123 (0%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
            +I+RDESLHL FGI++I  +  ENP L T +F  + R M+     +E  Y H+ +P G 
Sbjct: 202 DWIVRDESLHLKFGINLILTVLEENPDLQTSDFADEIRGMIIAGVEMEEEYNHDLLPNGI 261

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           +GLN+    QY++++A+RR  ++G +P +  T NP  WM+   D  +  NFFE   T Y+
Sbjct: 262 LGLNSGYINQYVKYLADRRLEELGFDPEYNVT-NPAKWMATANDTFELVNFFEAINTSYE 320

Query: 129 QGA 131
             A
Sbjct: 321 SNA 323


>gi|159040364|ref|YP_001539617.1| ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
 gi|157919199|gb|ABW00627.1| Ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
          Length = 350

 Score = 97.4 bits (241), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 80/130 (61%), Gaps = 2/130 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DV++ I+ E P L+  + +++ + M+ EA   E  +A +
Sbjct: 214 GLASGTNWVFRDESMHMAFAFDVVDTIRAEEPDLFDADLERQIKDMVTEAVDCEAQFAED 273

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  GL+     +Y+Q +A+RR   +G+ P++  ++NPF +M E+ D+++  NFFE 
Sbjct: 274 LLEQGVSGLSLADMREYLQHVADRRLVTLGIAPIYG-SQNPFAFM-ELQDVQELSNFFER 331

Query: 123 RVTEYQQGAG 132
           RV+ YQ G  
Sbjct: 332 RVSAYQVGVS 341


>gi|311743885|ref|ZP_07717691.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
 gi|311313015|gb|EFQ82926.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
          Length = 357

 Score = 97.4 bits (241), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 75/125 (60%), Gaps = 1/125 (0%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
            +I+RDESLHL FGI++I  +  ENP + T EF  + + M+ +A  +E AY  + +P G 
Sbjct: 233 DWIVRDESLHLKFGINLILTVLEENPEVATAEFAAEIQQMVLDAVEMEEAYNRDLLPGGI 292

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           +GLNA    QY++++A+RR  ++G  P +  T NP  WM+   D  +  NFFE   T Y+
Sbjct: 293 LGLNADYINQYVRYLADRRLEELGFGPHYGAT-NPAKWMATANDTLQLVNFFEATNTSYE 351

Query: 129 QGAGL 133
             A L
Sbjct: 352 VNAKL 356


>gi|50955339|ref|YP_062627.1| ribonucleotide-diphosphate reductase subunit beta [Leifsonia xyli
           subsp. xyli str. CTCB07]
 gi|50951821|gb|AAT89522.1| ribonucleoside-diphosphate reductase, beta chain [Leifsonia xyli
           subsp. xyli str. CTCB07]
          Length = 329

 Score = 96.7 bits (239), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 1/123 (0%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
            +++RDESLHL FGI++I  +  ENP L T EF  + + M+ +A  +E  Y  + +P G 
Sbjct: 202 DWVVRDESLHLKFGINLILTVLEENPDLQTPEFAAEIKQMILDAVEMEEQYNRDLLPGGI 261

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           +GLNA    QY++++A+RR  ++G E  +K + NP  WM+   D  +  NFFE+  T Y+
Sbjct: 262 LGLNANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLELVNFFESTNTSYE 320

Query: 129 QGA 131
             A
Sbjct: 321 SNA 323


>gi|225873704|ref|YP_002755163.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791613|gb|ACO31703.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
          Length = 340

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 2/130 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES HL F  +V+N ++ + P LW  + +     MLHEA   E  +A +
Sbjct: 204 GLASGTNWVFRDESCHLEFAFEVVNVVRSQEPDLWDAQLEADIVEMLHEAVDAETQFAED 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL+     QY+ ++A+ R  ++G+ P F   +NPF +M E+ D+++  NFFE 
Sbjct: 264 LLSGGVAGLSVRDMRQYLGYVADSRLQRLGIAPAFG-VKNPFSFM-ELQDVQELTNFFER 321

Query: 123 RVTEYQQGAG 132
           RV+ YQ    
Sbjct: 322 RVSAYQTAVA 331


>gi|168702494|ref|ZP_02734771.1| ribonucleoside-diphosphate reductase, beta subunit [Gemmata
           obscuriglobus UQM 2246]
          Length = 332

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 76/128 (59%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F   VI+ ++ E P L+  E + +   ML EA   E A+A +
Sbjct: 196 GLATGTNWVFRDESAHMAFAFRVIDTVRREEPDLFDAELEAQIVAMLREAVECETAFARD 255

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  GL+      Y++++A+RR   +G+ P+F   +NPF +M ++ D+++  NFFE 
Sbjct: 256 VLGQGVAGLSLADLRSYLEYVADRRLESLGIAPVFG-AKNPFGFM-DLQDVQELTNFFER 313

Query: 123 RVTEYQQG 130
           RV+ YQ G
Sbjct: 314 RVSAYQLG 321


>gi|167948644|ref|ZP_02535718.1| Ribonucleotide reductase, beta subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 124

 Score = 96.3 bits (238), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 66/127 (51%), Gaps = 3/127 (2%)

Query: 10  YIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 69
           YIMRDE LH +FGI V  QI +E          Q  R M  E    E AYA   +    +
Sbjct: 1   YIMRDEVLHASFGIRVAKQIMLEEN---IAPDPQAIREMWDECEAAEDAYAGYILRDPIL 57

Query: 70  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           G +        +++ANRR  QIGL   +   E   PW+ E  +L+KEKNFFET VTEYQ 
Sbjct: 58  GYSKDDHMGQFRYVANRRARQIGLSEPYPGAEATLPWLDEQANLRKEKNFFETTVTEYQT 117

Query: 130 GAGLKWD 136
           G  L WD
Sbjct: 118 GGALNWD 124


>gi|110802082|ref|YP_699620.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens SM101]
 gi|110682583|gb|ABG85953.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens SM101]
          Length = 344

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 2/135 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++TKE +++ R M+      EIA+ 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMMRTGVEHEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-N 118
           H  +     G+N    E+Y+++I N R   IGLEPLF+ Y ENP PW+    D  + K +
Sbjct: 266 HYVIGDNVTGINKNLIERYIKYIGNLRAKAIGLEPLFEGYNENPAPWVDYYADANQVKTD 325

Query: 119 FFETRVTEYQQGAGL 133
           FFE + T Y +   L
Sbjct: 326 FFEAKSTAYAKAGAL 340


>gi|18311342|ref|NP_563276.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens str. 13]
 gi|110801267|ref|YP_697050.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens ATCC 13124]
 gi|168205189|ref|ZP_02631194.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|168210336|ref|ZP_02635961.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|168213271|ref|ZP_02638896.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|168216675|ref|ZP_02642300.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
 gi|169347055|ref|ZP_02865997.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|182625797|ref|ZP_02953564.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|18146026|dbj|BAB82066.1| ribonucleoside-diphosphate reductase beta subunit [Clostridium
           perfringens str. 13]
 gi|110675914|gb|ABG84901.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens ATCC 13124]
 gi|169296738|gb|EDS78867.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|170663363|gb|EDT16046.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|170711548|gb|EDT23730.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|170715235|gb|EDT27417.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|177908953|gb|EDT71440.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|182381151|gb|EDT78630.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
          Length = 344

 Score = 95.1 bits (235), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 2/135 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++TKE +++ R M+      EIA+ 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMVRTGVEHEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-N 118
           H  +     G+N    E+Y+++I N R   IGLEPLF+ Y ENP PW+    D  + K +
Sbjct: 266 HYVIGDNVTGINKNLIERYIKYIGNLRVKAIGLEPLFEGYNENPAPWVDYYADANQVKTD 325

Query: 119 FFETRVTEYQQGAGL 133
           FFE + T Y +   L
Sbjct: 326 FFEAKSTAYAKAGAL 340


>gi|148259750|ref|YP_001233877.1| ribonucleotide-diphosphate reductase subunit beta [Acidiphilium
           cryptum JF-5]
 gi|146401431|gb|ABQ29958.1| Ribonucleoside-diphosphate reductase [Acidiphilium cryptum JF-5]
          Length = 338

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 10/142 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLL 55
           M G+ +   + +RDESLH N  I +      ENP +WT+E +++     +  + HE   +
Sbjct: 197 MKGMGQIVSWSVRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFI 256

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+    +     GL A   ++Y+++IA+RR  Q+GL PLF   +NP PW+ E+++  +
Sbjct: 257 DLAFEFGAVE----GLTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVE 312

Query: 116 EKNFFETRVTEYQQGAGL-KWD 136
             NFFE R TEY + +    WD
Sbjct: 313 HTNFFENRATEYSKASTAGSWD 334


>gi|326403282|ref|YP_004283363.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
 gi|325050143|dbj|BAJ80481.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
          Length = 338

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 10/142 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLL 55
           M G+ +   + +RDESLH N  I +      ENP +WT+E +++     +  + HE   +
Sbjct: 197 MKGMGQIVSWSVRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFI 256

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+    +     GL A   ++Y+++IA+RR  Q+GL PLF   +NP PW+ E+++  +
Sbjct: 257 DLAFEFGAVE----GLTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVE 312

Query: 116 EKNFFETRVTEYQQGAGL-KWD 136
             NFFE R TEY + +    WD
Sbjct: 313 HTNFFENRATEYSKASTAGSWD 334


>gi|330949821|gb|EGH50081.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae Cit 7]
          Length = 65

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/65 (64%), Positives = 48/65 (73%)

Query: 72  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 131
           N    E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 1   NGAGMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 60

Query: 132 GLKWD 136
            L WD
Sbjct: 61  ALSWD 65


>gi|297157411|gb|ADI07123.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
           BCW-1]
          Length = 340

 Score = 94.4 bits (233), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 78/126 (61%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF   V++ ++ E P L+  E QQ+   ML EA   E+ +A +
Sbjct: 204 GLATGTNWVFRDETMHMNFAFQVVDTVREEEPELFDDELQQQVTDMLREAVEAELQFARD 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+ ++++  NFFE 
Sbjct: 264 LCGEGLPGMNTESMRQYLECVADQRLARLGFAPVYG-SENPFSFM-ELQNVQELTNFFER 321

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 322 RASAYQ 327


>gi|238023979|ref|YP_002908211.1| Ribonucleotide reductase subunit beta [Burkholderia glumae BGR1]
 gi|237878644|gb|ACR30976.1| Ribonucleotide reductase, beta subunit [Burkholderia glumae BGR1]
          Length = 337

 Score = 94.0 bits (232), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/136 (44%), Positives = 79/136 (58%), Gaps = 5/136 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   A+Q+QYIMRDE LH  FGI VI Q+ +E  HL  +      + +  EA   E AYA
Sbjct: 205 MKATAQQFQYIMRDEVLHCGFGIRVIRQL-LEEEHL--RLDPHAVQQIWEEAEAAERAYA 261

Query: 61  HETMPKGFVGLNAP-SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
              +    +G +A   CEQ+ +FIANRR  Q+ +   F    N  PW+ E  +L+KEKNF
Sbjct: 262 QYILRDPILGYSAELHCEQF-RFIANRRATQLSMPAPFPGATNALPWLDEQANLRKEKNF 320

Query: 120 FETRVTEYQQGAGLKW 135
           FETRVT+YQ G  L W
Sbjct: 321 FETRVTDYQSGGALDW 336


>gi|58584525|ref|YP_198098.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
 gi|58418841|gb|AAW70856.1| Ribonucleotide reductase, beta subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 331

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 1/132 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH N  I++ N    EN  +W  EF++   +       LE  + 
Sbjct: 181 MKGMGQIIAWSARDETLHTNSIINLFNTFIKENNEIWNDEFKEGLYSACRTIVGLEDEFI 240

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V GL+A     Y+++IANRR  Q+GL+P++   +NP PW+ E+++  +  NF
Sbjct: 241 KLAFDLGDVEGLSAEEVRNYIRYIANRRLMQLGLKPIYDINDNPLPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGA 131
           FE RVTEY + A
Sbjct: 301 FENRVTEYSRAA 312


>gi|317122809|ref|YP_004102812.1| ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
 gi|315592789|gb|ADU52085.1| Ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
          Length = 336

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 76/129 (58%), Gaps = 1/129 (0%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++++DESLHL+FGI +I  +  E+P L T EF ++ + ++  A  LE  Y   
Sbjct: 205 GLATLVDWVLKDESLHLSFGIHLITTLLEEHPELMTPEFAREVKGLILRAVELERDYNRA 264

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P+  +G++A     Y++++ +RR  ++GL P F  T NP  WM+  +D+ +  NFFE 
Sbjct: 265 LLPRPILGVSADYLNAYIEYVTDRRLDELGLGPHFG-TPNPAQWMATEVDVPEIVNFFEA 323

Query: 123 RVTEYQQGA 131
           R   Y+  A
Sbjct: 324 RNIHYEVAA 332


>gi|88607783|ref|YP_505152.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           phagocytophilum HZ]
 gi|88598846|gb|ABD44316.1| ribonucleoside-diphosphate reductase, beta subunit [Anaplasma
           phagocytophilum HZ]
          Length = 323

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 1/132 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDESLH +  I + N    EN  +W  + +Q+         +LE  + 
Sbjct: 181 MKGMGQIIAWSARDESLHTDSIIRLFNTFVHENGEIWDDDLKQELYDACKVIVMLEDEFI 240

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V GL+A   ++Y++FIANRR  Q+ LEP++   ENP PW+ E+++  +  NF
Sbjct: 241 DLAFALGDVEGLSACEVKRYIRFIANRRLKQLHLEPIYDVAENPLPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGA 131
           FE RVTEY + A
Sbjct: 301 FENRVTEYARAA 312


>gi|314918862|gb|EFS82693.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA1]
 gi|314921071|gb|EFS84902.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA3]
          Length = 328

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 1/123 (0%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
            +++RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G 
Sbjct: 201 DWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGI 260

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           +G+NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+
Sbjct: 261 LGMNADYVNDYVKYLADRRLEELGFEPEYR-VANPAKWMATANDTLQVVNFFEATNTSYE 319

Query: 129 QGA 131
             A
Sbjct: 320 VNA 322


>gi|289425969|ref|ZP_06427716.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|289153512|gb|EFD02226.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|313763766|gb|EFS35130.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA1]
 gi|313802998|gb|EFS44206.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA2]
 gi|313816916|gb|EFS54630.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA1]
 gi|313829718|gb|EFS67432.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA2]
 gi|313839374|gb|EFS77088.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL086PA1]
 gi|314916474|gb|EFS80305.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA4]
 gi|314932316|gb|EFS96147.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL067PA1]
 gi|314956590|gb|EFT00842.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA1]
 gi|314959472|gb|EFT03574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA1]
 gi|314964864|gb|EFT08964.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA1]
 gi|314968630|gb|EFT12728.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA1]
 gi|315079174|gb|EFT51177.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA2]
 gi|315100241|gb|EFT72217.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA2]
 gi|315102565|gb|EFT74541.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA1]
 gi|315109517|gb|EFT81493.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA2]
 gi|327455890|gb|EGF02545.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA3]
 gi|327458042|gb|EGF04697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA2]
 gi|328757204|gb|EGF70820.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA1]
 gi|328757585|gb|EGF71201.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA2]
          Length = 328

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 1/123 (0%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
            +++RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G 
Sbjct: 201 DWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGI 260

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           +G+NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+
Sbjct: 261 LGMNADYVNDYVKYLADRRLEELGFEPEYR-VANPAKWMATANDTLQVVNFFEATNTSYE 319

Query: 129 QGA 131
             A
Sbjct: 320 VNA 322


>gi|221633388|ref|YP_002522613.1| ribonucleotide-diphosphate reductase subunit beta [Thermomicrobium
           roseum DSM 5159]
 gi|221156578|gb|ACM05705.1| ribonucleoside-diphosphate reductase, beta subunit [Thermomicrobium
           roseum DSM 5159]
          Length = 328

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 77/133 (57%), Gaps = 2/133 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+     ++++DESLHL+FGI +I  I  E+P + +  F ++ R ++  A  LE AY   
Sbjct: 198 GLCTIVDWVLKDESLHLSFGIHLITTILEEHPEIMSAAFGRQLRELILRAVELEEAYNRA 257

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P+  +GL+A    +Y+++IA+RR  ++GL P+     NP  WM   +D+ +  NFFE 
Sbjct: 258 VLPEPLIGLDADVLNRYVRYIADRRLEELGL-PIAFGEPNPLRWMVAQVDMPEIVNFFEA 316

Query: 123 RVTEYQQGAGLKW 135
           R   Y+ G   +W
Sbjct: 317 RNIHYEVGRA-RW 328


>gi|50843560|ref|YP_056787.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium acnes KPA171202]
 gi|282854887|ref|ZP_06264221.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289427904|ref|ZP_06429608.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|295131638|ref|YP_003582301.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|50841162|gb|AAT83829.1| ribonucleoside-diphosphate reductase beta chain [Propionibacterium
           acnes KPA171202]
 gi|282582033|gb|EFB87416.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289158787|gb|EFD06987.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|291376691|gb|ADE00546.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|313771782|gb|EFS37748.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL074PA1]
 gi|313808408|gb|EFS46875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA2]
 gi|313810605|gb|EFS48319.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA1]
 gi|313813765|gb|EFS51479.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA1]
 gi|313818171|gb|EFS55885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA2]
 gi|313821029|gb|EFS58743.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA1]
 gi|313823899|gb|EFS61613.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA2]
 gi|313827161|gb|EFS64875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA1]
 gi|313831646|gb|EFS69360.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL007PA1]
 gi|313834800|gb|EFS72514.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL056PA1]
 gi|314924366|gb|EFS88197.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL001PA1]
 gi|314927054|gb|EFS90885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA3]
 gi|314961874|gb|EFT05975.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA2]
 gi|314965892|gb|EFT09991.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA2]
 gi|314974996|gb|EFT19091.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA1]
 gi|314977908|gb|EFT22002.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL045PA1]
 gi|314979603|gb|EFT23697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA2]
 gi|314981613|gb|EFT25706.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA3]
 gi|314984684|gb|EFT28776.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA1]
 gi|314988338|gb|EFT32429.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA2]
 gi|314990428|gb|EFT34519.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA3]
 gi|315082361|gb|EFT54337.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL078PA1]
 gi|315083809|gb|EFT55785.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA2]
 gi|315087306|gb|EFT59282.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA3]
 gi|315089724|gb|EFT61700.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA1]
 gi|315092253|gb|EFT64229.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA4]
 gi|315094826|gb|EFT66802.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL060PA1]
 gi|315095599|gb|EFT67575.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL038PA1]
 gi|315104692|gb|EFT76668.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA2]
 gi|315107754|gb|EFT79730.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA1]
 gi|327326613|gb|EGE68401.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA3]
 gi|327332877|gb|EGE74609.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA2]
 gi|327335278|gb|EGE76988.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL097PA1]
 gi|327447704|gb|EGE94358.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA2]
 gi|327448579|gb|EGE95233.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA1]
 gi|327449568|gb|EGE96222.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA2]
 gi|328757395|gb|EGF71011.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL020PA1]
 gi|328762002|gb|EGF75508.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL099PA1]
          Length = 328

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 1/123 (0%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
            +++RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G 
Sbjct: 201 DWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGI 260

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           +G+NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+
Sbjct: 261 LGMNADYVNDYVKYLADRRLEELGFEPEYRVV-NPAKWMATANDTLQVVNFFEATNTSYE 319

Query: 129 QGA 131
             A
Sbjct: 320 VNA 322


>gi|327328671|gb|EGE70431.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL103PA1]
          Length = 328

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 1/123 (0%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
            +++RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G 
Sbjct: 201 DWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGI 260

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           +G+NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+
Sbjct: 261 LGMNADYVNDYVKYLADRRLEELGFEPEYRIV-NPAKWMATANDTLQVVNFFEATNTSYE 319

Query: 129 QGA 131
             A
Sbjct: 320 VNA 322


>gi|29829569|ref|NP_824203.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           avermitilis MA-4680]
 gi|29606677|dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptomyces avermitilis MA-4680]
          Length = 338

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 76/126 (60%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  +V++ ++ E P L+  E QQ+   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDDELQQQVTDMLREAVEAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 262 LCGDGLPGMNTESMRQYLECVADQRLQRLGFAPVYG-SENPFSFM-ELQGVQELTNFFER 319

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 320 RASAYQ 325


>gi|42523460|ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
 gi|39575666|emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
          Length = 336

 Score = 91.3 bits (225), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 77/132 (58%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+A    ++ RDES+H+ F I+V+   + E P L+ ++ +     ML +A   E+ +A
Sbjct: 198 LAGLASGTNWVFRDESMHMAFAIEVVKTARKEEPELFNQQMEDMVVQMLEDAIECEMEFA 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           H+ +  G  GL+A    QY+++ A++R   + + P +   +NPF +M E+ D+++  NFF
Sbjct: 258 HDVLNLGVAGLSAKDMRQYLEYCADQRLESLNIAPRYN-VKNPFIFM-ELQDMQELANFF 315

Query: 121 ETRVTEYQQGAG 132
           E RV+ YQ G  
Sbjct: 316 ERRVSAYQTGVS 327


>gi|329939692|ref|ZP_08288993.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
 gi|329301262|gb|EGG45157.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
          Length = 347

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 77/126 (61%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+ +E  ++   ML EA   E+ +A +
Sbjct: 211 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPGLFDEELGRQVTDMLREAVEAELQFARD 270

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 271 LCGDGLPGMNTESMRQYLQCVADQRLVRLGFAPVYG-SENPFSFM-ELQGVQELTNFFER 328

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 329 RASAYQ 334


>gi|297202281|ref|ZP_06919678.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
 gi|197710199|gb|EDY54233.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
          Length = 340

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 76/126 (60%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+    QQ+   ML EA   E+ +A +
Sbjct: 204 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDRLQQQVTDMLAEAVEAELQFARD 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 264 LCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFER 321

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 322 RPSAYQ 327


>gi|91763118|ref|ZP_01265082.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717531|gb|EAS84182.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 342

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQ----QKSRTML-HEATLL 55
           M G+ +   + +RDE+LH N  I +  +   ENP +WT E +    +  RT++ HE   +
Sbjct: 201 MKGMGQIVTWSVRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFI 260

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+    M     GL A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +
Sbjct: 261 DLAFEMGPMQ----GLTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVE 316

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + A
Sbjct: 317 HMNFFEGRSTEYSKAA 332


>gi|71083845|ref|YP_266565.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71062958|gb|AAZ21961.1| ribonucleoside-diphosphate reductase beta chain [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 337

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQ----QKSRTML-HEATLL 55
           M G+ +   + +RDE+LH N  I +  +   ENP +WT E +    +  RT++ HE   +
Sbjct: 196 MKGMGQIVTWSVRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFI 255

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+    M     GL A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +
Sbjct: 256 DLAFEMGPMQ----GLTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVE 311

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + A
Sbjct: 312 HMNFFEGRSTEYSKAA 327


>gi|294631326|ref|ZP_06709886.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
 gi|292834659|gb|EFF93008.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
          Length = 339

 Score = 91.3 bits (225), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 77/126 (61%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + +Q+   ML EA   E+ +A +
Sbjct: 203 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDQLEQQVTDMLREAVEAELQFARD 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 263 LCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFER 320

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 321 RPSAYQ 326


>gi|254455551|ref|ZP_05068980.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207082553|gb|EDZ59979.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 335

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLL 55
           M G+ +   + +RDE+LH N  I +  +   ENP +WT    KE  +  RT++ HE   +
Sbjct: 194 MKGMGQIVTWSVRDETLHCNSMIRIFKEFINENPEIWTPKLKKELYEACRTIIAHEDAFI 253

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+    M     GL A   + Y++FI NRR  Q+GLEP++   +NP  W+  +++  +
Sbjct: 254 DLAFEMGPME----GLTAQEVKDYIRFIGNRRLTQLGLEPIYDVDKNPLGWLDTMLNAVE 309

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + +
Sbjct: 310 HMNFFEGRATEYSKAS 325


>gi|190570498|ref|YP_001974856.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|213019257|ref|ZP_03335064.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
 gi|190356770|emb|CAQ54129.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|212995366|gb|EEB56007.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
          Length = 329

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 1/132 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH N  I++ N    EN  +W  EF+++  +       LE  + 
Sbjct: 181 MKGMGQIIAWSARDETLHTNSIINLFNTFIKENNEIWNDEFKEELYSACRTIVELEDEFI 240

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V GL+A     Y+++IANRR  Q+GL+ ++   +NP PW+ E+++  +  NF
Sbjct: 241 SLAFDLGDVEGLSAEEVRNYIRYIANRRLTQLGLKSIYNVKDNPIPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGA 131
           FE RVTEY + A
Sbjct: 301 FENRVTEYSRAA 312


>gi|313903043|ref|ZP_07836438.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
 gi|313466767|gb|EFR62286.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
          Length = 336

 Score = 90.9 bits (224), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 75/129 (58%), Gaps = 1/129 (0%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++++DESLHL+FGI +I  +  E+P L T  F ++ + ++  A  LE  Y   
Sbjct: 205 GLATLVDWVLKDESLHLSFGIHLITALLEEHPELMTPAFAREVKGLILRAVELERDYNRA 264

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P+  +G++A     Y++++ +RR  ++GL P F  T NP  WM+  +D+ +  NFFE 
Sbjct: 265 LLPRPILGVSADYLNAYVEYVTDRRLDELGLGPHFG-TPNPAKWMATEVDVPEIVNFFEA 323

Query: 123 RVTEYQQGA 131
           R   Y+  A
Sbjct: 324 RNIHYEVAA 332


>gi|313793687|gb|EFS41718.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA1]
 gi|327456018|gb|EGF02673.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL092PA1]
          Length = 328

 Score = 90.5 bits (223), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
            +++RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G 
Sbjct: 201 DWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDMLPRGI 260

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
            G+NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   T Y+
Sbjct: 261 RGMNADYVNDYVKYLADRRLEELGFEPEYR-VANPAKWMATANDTLQVVNFFEATNTSYE 319

Query: 129 QGA 131
             A
Sbjct: 320 VNA 322


>gi|302554045|ref|ZP_07306387.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471663|gb|EFL34756.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
          Length = 341

 Score = 90.5 bits (223), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 77/126 (61%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + +Q+   ML EA   E+ +A +
Sbjct: 205 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLRQEVTDMLREAVEAELQFARD 264

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 265 LCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFER 322

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 323 RPSAYQ 328


>gi|239982206|ref|ZP_04704730.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           albus J1074]
 gi|291454052|ref|ZP_06593442.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
 gi|291357001|gb|EFE83903.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
          Length = 350

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 78/126 (61%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + Q++   ML EA   E+ +A +
Sbjct: 214 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDKLQEQVVAMLKEAVEAELQFARD 273

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 274 LCGDGLPGMNTESMREYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFER 331

Query: 123 RVTEYQ 128
           RV+ YQ
Sbjct: 332 RVSAYQ 337


>gi|58700135|ref|ZP_00374651.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58533347|gb|EAL57830.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
          Length = 225

 Score = 90.5 bits (223), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 1/132 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH N  I + N    EN  +W  EF+++  +       LE  + 
Sbjct: 93  MKGMGQIIAWSARDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFI 152

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V GL+A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NF
Sbjct: 153 KLAFDLGDVEGLSAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNF 212

Query: 120 FETRVTEYQQGA 131
           FE RVTEY + A
Sbjct: 213 FENRVTEYSRAA 224


>gi|307328555|ref|ZP_07607729.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
 gi|306885823|gb|EFN16835.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
          Length = 340

 Score = 90.1 bits (222), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 76/126 (60%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F   V++ ++ E P L+  E +Q+   ML EA   E+ +A +
Sbjct: 204 GLATGTNWVFRDESMHMEFAFSVVDTVREEEPDLFDDELRQQVTDMLKEAVEAELQFARD 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S ++Y+Q +A++R  ++G   +F  +ENPF +M E+ ++++  NFFE 
Sbjct: 264 LCGDGLPGMNTASMQEYLQCVADQRLMRLGFPAVFG-SENPFSFM-ELQNVQELTNFFER 321

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 322 RASAYQ 327


>gi|88861512|ref|ZP_01136127.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
 gi|88816487|gb|EAR26327.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
          Length = 219

 Score = 90.1 bits (222), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLL 55
           M G+ +   + +RDE+LH N  I +  +   ENP +WT    KE  +  R ++ HE   +
Sbjct: 78  MKGMGQIVTWSVRDETLHCNSMIRIFKEFIKENPEIWTPTLKKELYEACRIIVEHEDAFI 137

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+    M     GL A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +
Sbjct: 138 DLAFEMGPME----GLTAQEVKDYIRFIANRRLIQLGLEPIYDVQKNPLTWLDTMLNAVE 193

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + +
Sbjct: 194 HMNFFEGRATEYSKAS 209


>gi|239947951|ref|ZP_04699704.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922227|gb|EER22251.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 327

 Score = 90.1 bits (222), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLL 55
           M G+ +   + +RDE+LH N  I +     IENP +WT+  +++      T++H E   +
Sbjct: 178 MKGMGQIIAWSVRDETLHTNSIITLFKTFVIENPEVWTETLRKRIYEACTTIVHFEDAFI 237

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           E+A+       G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +
Sbjct: 238 ELAFE----VGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVE 293

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + A
Sbjct: 294 HTNFFENRATEYSKAA 309


>gi|42520108|ref|NP_966023.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58696705|ref|ZP_00372253.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|58698234|ref|ZP_00373154.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|225630036|ref|YP_002726827.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
 gi|42409845|gb|AAS13957.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58535261|gb|EAL59340.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58537117|gb|EAL60231.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|225592017|gb|ACN95036.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
          Length = 329

 Score = 90.1 bits (222), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 1/132 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH N  I + N    EN  +W  EF+++  +       LE  + 
Sbjct: 181 MKGMGQIIAWSARDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFI 240

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V GL+A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NF
Sbjct: 241 KLAFDLGDVEGLSAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGA 131
           FE RVTEY + A
Sbjct: 301 FENRVTEYSRAA 312


>gi|302542646|ref|ZP_07294988.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302460264|gb|EFL23357.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           himastatinicus ATCC 53653]
          Length = 343

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 75/126 (59%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F   V++ ++ E P L+  + +++   ML EA   E+ +AH+
Sbjct: 207 GLATGTNWVFRDESMHMEFAFSVVDTVREEEPDLFDDDLERQVTDMLKEAVEAELQFAHD 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S   Y++ +A++R  ++G   +F  +ENPF +M E+ D+++  NFFE 
Sbjct: 267 LCGDGLPGMNTESMRAYLECVADQRLARLGFPAVFG-SENPFSFM-ELQDVQELTNFFER 324

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 325 RASAYQ 330


>gi|256825983|ref|YP_003149943.1| ribonucleotide reductase subunit beta [Kytococcus sedentarius DSM
           20547]
 gi|256689376|gb|ACV07178.1| ribonucleotide reductase, beta subunit [Kytococcus sedentarius DSM
           20547]
          Length = 365

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  +V+  ++ E P L+  E   + R ML EA   E  +A +
Sbjct: 229 GLASGTNWVFRDESMHMAFAFEVVETVRSEEPDLFDAEMAGQVRQMLMEAVDAEAQFAED 288

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL+      Y++ +A+RR  Q+G+  ++  T+NP  +M E+ D+++  NFFE 
Sbjct: 289 LLGMGVAGLSVADMRAYLENVADRRAVQLGMPEIYG-TKNPLAFM-ELQDVQELSNFFER 346

Query: 123 RVTEYQQG 130
           RV+ YQ G
Sbjct: 347 RVSAYQVG 354


>gi|302558498|ref|ZP_07310840.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
 gi|302476116|gb|EFL39209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
          Length = 341

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 77/126 (61%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+ ++  Q+   ML EA   E+ +A +
Sbjct: 205 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDEQLGQQVTAMLREAVEAELQFARD 264

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 265 LCGDGLPGMNTESMRQYLECVADQRLVRLGFAPVYG-SENPFSFM-ELQGVQELTNFFER 322

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 323 RPSAYQ 328


>gi|258542157|ref|YP_003187590.1| ribonucleotide-diphosphate reductase subunit beta [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633235|dbj|BAH99210.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636294|dbj|BAI02263.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639347|dbj|BAI05309.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642403|dbj|BAI08358.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645458|dbj|BAI11406.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648511|dbj|BAI14452.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651564|dbj|BAI17498.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654555|dbj|BAI20482.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 339

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 9/134 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTML-HEATLLEI 57
           G+ +   + +RDE+LH    I +      ENP LWT++ + +     RT++ HE   +++
Sbjct: 195 GMGQIVSWSVRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDL 254

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
           A+    +     GLNA   + Y+ FIA+RR  Q+GLEP++  T NP PW+ ++++  +  
Sbjct: 255 AFEMGAVE----GLNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHT 310

Query: 118 NFFETRVTEYQQGA 131
           NFFE R TEY + +
Sbjct: 311 NFFENRATEYSRAS 324


>gi|254388985|ref|ZP_05004216.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|294814921|ref|ZP_06773564.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|326443293|ref|ZP_08218027.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
           ATCC 27064]
 gi|197702703|gb|EDY48515.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|218078699|emb|CAB90708.3| class Ia ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces clavuligerus ATCC 27064]
 gi|294327520|gb|EFG09163.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 339

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 76/126 (60%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ ++ +
Sbjct: 203 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFSRD 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 263 LCGDGLPGMNTESMREYLQCVADQRLARLGFAPVYG-SENPFSFM-ELQGVQELTNFFER 320

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 321 RPSAYQ 326


>gi|21223593|ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
 gi|7328345|emb|CAB82486.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces coelicolor A3(2)]
 gi|8546891|emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
          Length = 343

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 77/126 (61%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + +++   ML EA   E+ +A +
Sbjct: 207 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARD 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 267 LCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFER 324

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 325 RPSAYQ 330


>gi|256785295|ref|ZP_05523726.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           lividans TK24]
 gi|289769189|ref|ZP_06528567.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
 gi|289699388|gb|EFD66817.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
          Length = 343

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 77/126 (61%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + +++   ML EA   E+ +A +
Sbjct: 207 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARD 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 267 LCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFER 324

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 325 RPSAYQ 330


>gi|99036000|ref|ZP_01315041.1| hypothetical protein Wendoof_01000112 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 329

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 1/132 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH N  I + N    EN  +W  EF+++  +       LE  + 
Sbjct: 181 MKGMGQIIAWSARDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFI 240

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V GL+A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NF
Sbjct: 241 KLAFDLGDVEGLSAEEVRNYIRYVANRRLMQLGLESIYDVNDNPTPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGA 131
           FE RVTEY + A
Sbjct: 301 FENRVTEYSRAA 312


>gi|329113329|ref|ZP_08242110.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
 gi|326697154|gb|EGE48814.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
          Length = 339

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 9/134 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTML-HEATLLEI 57
           G+ +   + +RDE+LH    I +      ENP LWT++ + +     RT++ HE   +++
Sbjct: 195 GMGQIVSWSVRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFIDL 254

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
           A+    +     GLNA   + Y+ FIA+RR  Q+GLEP++  T NP PW+ ++++  +  
Sbjct: 255 AFEMGAVE----GLNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHT 310

Query: 118 NFFETRVTEYQQGA 131
           NFFE R TEY + +
Sbjct: 311 NFFENRSTEYSRAS 324


>gi|225677302|ref|ZP_03788281.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
 gi|225590665|gb|EEH11913.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
          Length = 329

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 1/132 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH N  I + N    EN  +W  EF+++  +       LE  + 
Sbjct: 181 MKGMGQIIAWSARDETLHTNSIIMLFNTFIKENNEIWDDEFKEELYSACRTIVELEDEFI 240

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V GL+A     Y+ ++ANRR  Q+GLE ++   +NP PW+ E+++  +  NF
Sbjct: 241 KLAFDFGDVEGLSAEEVRNYIHYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGA 131
           FE RVTEY + A
Sbjct: 301 FENRVTEYSRAA 312


>gi|297192180|ref|ZP_06909578.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720175|gb|EDY64083.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
          Length = 340

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 77/126 (61%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+  E +Q+   ML EA   E+ +  +
Sbjct: 204 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDELRQQVTDMLKEAVEAELQFGRD 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  +Y+Q +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 264 LCGEGLPGMNTESMREYLQCVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFER 321

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 322 RPSAYQ 327


>gi|295836584|ref|ZP_06823517.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
 gi|197697282|gb|EDY44215.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
          Length = 345

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 76/126 (60%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  E +Q+ + ML  A   E+ +A +
Sbjct: 209 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDAELEQEVKDMLDGAVNAELQFARD 268

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE 
Sbjct: 269 LCGDGLPGMNTESMREYLQCVADQRLQRLGFAPVYG-SSNPFSFM-ELQGVQELTNFFER 326

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 327 RPSAYQ 332


>gi|328884923|emb|CCA58162.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Streptomyces venezuelae ATCC 10712]
          Length = 338

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 75/126 (59%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    +Q+   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALRQQVTDMLKEAVEAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 262 LCGDGLPGMNTESMREYLQCVADQRLQRLGFAPVYG-SENPFSFM-ELQGVQELTNFFER 319

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 320 RPSAYQ 325


>gi|209966751|ref|YP_002299666.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
           centenum SW]
 gi|209960217|gb|ACJ00854.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodospirillum
           centenum SW]
          Length = 322

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 82/142 (57%), Gaps = 10/142 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLL 55
           M G+ +   + +RDE+LH    I +      ENP +WT+ FQ++      T++H E   +
Sbjct: 180 MKGMGQIVTWSVRDETLHTLSMIKLFRTFVNENPQVWTEAFQRELTVCCETIVHHEDAFI 239

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+  E  P    G+ A   ++Y+++IA+RR  Q+GLEP+++  +NP PWM  +++  +
Sbjct: 240 DLAF--EMGPVE--GMTAEDVKRYIRWIADRRLGQLGLEPVYRIEKNPLPWMDAILNGIE 295

Query: 116 EKNFFETRVTEYQQGAGL-KWD 136
             NFFE R TEY + A    WD
Sbjct: 296 HTNFFENRATEYSKAATRGTWD 317


>gi|313836278|gb|EFS73992.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA2]
 gi|314928743|gb|EFS92574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL044PA1]
 gi|314971220|gb|EFT15318.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA3]
 gi|328906508|gb|EGG26283.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium sp. P08]
          Length = 324

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 5/123 (4%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
            +++RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +P+G 
Sbjct: 201 DWVVRDESLHLKFGMNLILTVLEENPDIATDEFAVEIHDMILKGVEMEAQYNRDMLPRGI 260

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
            G+NA     Y++++A+RR  ++GLEP + +  NP  WM+   D  +  NFFET  T Y+
Sbjct: 261 PGMNA----DYVKYLADRRLEELGLEPEY-HVANPAKWMATANDTLQLVNFFETTNTSYE 315

Query: 129 QGA 131
             A
Sbjct: 316 VNA 318


>gi|239944172|ref|ZP_04696109.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 15998]
 gi|239990628|ref|ZP_04711292.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 11379]
 gi|291447643|ref|ZP_06587033.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
 gi|291350590|gb|EFE77494.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
          Length = 338

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 75/126 (59%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+  E QQ+   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDELQQQVTDMLKEAVEAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  QY++ +A++R  ++G  P    +ENPF +M E+  +++  NFFE 
Sbjct: 262 LCGEGLPGMNTESMRQYLECVADQRLARLGF-PTVYGSENPFSFM-ELQGVQELTNFFER 319

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 320 RPSAYQ 325


>gi|330994651|ref|ZP_08318574.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
 gi|329758292|gb|EGG74813.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
          Length = 365

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 73/136 (53%), Gaps = 2/136 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+ +   + +RDESLH +    +      ENP +WT   +   R +  +    E A+   
Sbjct: 225 GMGQIVSWSVRDESLHCDSMARLFRVFVQENPEIWTDTLRDDIRQICRDIVEHEDAFIDL 284

Query: 63  TMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
           +   G V GL+A   ++Y++F+ANRR  Q+GL+ ++    NP PW+ E+++  +  NFFE
Sbjct: 285 SFEMGAVEGLDAGQVKRYIRFVANRRLGQLGLDGIYDIATNPLPWVDEMVNAVEHANFFE 344

Query: 122 TRVTEYQQGAGL-KWD 136
            R TEY + +    WD
Sbjct: 345 NRATEYSRASTTGTWD 360


>gi|296116311|ref|ZP_06834927.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977130|gb|EFG83892.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 334

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 1/130 (0%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+ +   + +RDE+LH      +      ENP +WT++ Q   R +  +    E A+   
Sbjct: 195 GMGQIVSWSVRDETLHCVSMARLFRVFVQENPEIWTQKLQDDIRQICRDIVEHEDAFIDL 254

Query: 63  TMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
           +   G V GL+A   ++Y++F+ANRR  Q+GL+ L+    NP PW+ E+++  +  NFFE
Sbjct: 255 SFEMGPVEGLDAAQVKRYIRFVANRRLGQLGLDGLYDVATNPLPWVDEMVNAVEHANFFE 314

Query: 122 TRVTEYQQGA 131
            R TEY + A
Sbjct: 315 NRSTEYSRAA 324


>gi|291437353|ref|ZP_06576743.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
 gi|291340248|gb|EFE67204.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 340

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 76/126 (60%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+ +   Q+   ML EA   E+ +A +
Sbjct: 204 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARD 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 264 LCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFER 321

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 322 RPSAYQ 327


>gi|239929012|ref|ZP_04685965.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 339

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 76/126 (60%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+ +   Q+   ML EA   E+ +A +
Sbjct: 203 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARD 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 263 LCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFER 320

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 321 RPSAYQ 326


>gi|320107274|ref|YP_004182864.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
 gi|319925795|gb|ADV82870.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
          Length = 346

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 2/129 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES HL F  +V+  ++ + P LW  E +++   M+ EA   E  +A +
Sbjct: 210 GLASGTNWVFRDESAHLEFAFEVVQVVRAQEPDLWDTELERQVVVMMEEAIDAEAQFAED 269

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL+     QY+ ++A+ R  ++G+   F   +NPF +M E+ D+++  NFFE 
Sbjct: 270 LLSGGVAGLSVRDMRQYLGYVADSRLERLGIGAHFN-AKNPFSFM-ELQDVQELTNFFER 327

Query: 123 RVTEYQQGA 131
           RV+ YQ   
Sbjct: 328 RVSAYQTAV 336


>gi|282861024|ref|ZP_06270089.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
 gi|282563682|gb|EFB69219.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
          Length = 340

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 75/126 (59%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +
Sbjct: 204 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLREAVEAELQFGRD 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  QY++ +A++R  ++G   L+  +ENPF +M E+  +++  NFFE 
Sbjct: 264 LCGEGLPGMNTESMRQYLECVADQRLTRLGFPALYG-SENPFSFM-ELQGVQELTNFFER 321

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 322 RPSAYQ 327


>gi|115378653|ref|ZP_01465803.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364319|gb|EAU63404.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 288

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 2/131 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F  + I   + E P L+    Q     M+ EA   E  +A +
Sbjct: 148 GLAAGTNWVFRDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQD 207

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL+     QY++++A++R   +GL P+F+  +N  P+M ++ D+++  NFFE 
Sbjct: 208 LLSGGVAGLSVQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFM-DLQDVQELTNFFER 265

Query: 123 RVTEYQQGAGL 133
           RV+ YQ   G+
Sbjct: 266 RVSAYQVAVGV 276


>gi|310823070|ref|YP_003955428.1| ribonucleoside-diphosphate reductase subunit beta [Stigmatella
           aurantiaca DW4/3-1]
 gi|309396142|gb|ADO73601.1| Ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 336

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 2/131 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F  + I   + E P L+    Q     M+ EA   E  +A +
Sbjct: 196 GLAAGTNWVFRDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQD 255

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL+     QY++++A++R   +GL P+F+  +N  P+M ++ D+++  NFFE 
Sbjct: 256 LLSGGVAGLSVQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFM-DLQDVQELTNFFER 313

Query: 123 RVTEYQQGAGL 133
           RV+ YQ   G+
Sbjct: 314 RVSAYQVAVGV 324


>gi|320008647|gb|ADW03497.1| Ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 338

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 75/126 (59%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+  E +Q+   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDELRQQVTDMLKEAVEAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G   L+  +ENPF +M E+  +++  NFFE 
Sbjct: 262 LCGDGLPGMNTESMRQYLECVADQRLTRLGFPALYG-SENPFSFM-ELQGVQELTNFFER 319

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 320 RPSAYQ 325


>gi|328950373|ref|YP_004367708.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
 gi|328450697|gb|AEB11598.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
          Length = 332

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 73/128 (57%), Gaps = 1/128 (0%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+     + ++DESLHL+FG+ +I     E   + T    ++ R ++ EA  LE AY   
Sbjct: 202 GLGAIIDWTLKDESLHLSFGLHLITGFLEEYSEVMTPRLAREVRGLILEAVQLERAYNQA 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P+  +GL+A +   Y++++A+RR  ++GLE  F  T NP  WM+  +D+ +  NFFE 
Sbjct: 262 LLPRPILGLSAETLNAYVEYVADRRLEELGLEAAFG-TPNPAKWMATEVDVPEIVNFFEA 320

Query: 123 RVTEYQQG 130
             T Y+ G
Sbjct: 321 VNTSYEVG 328


>gi|157825769|ref|YP_001493489.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
 gi|157799727|gb|ABV74981.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
          Length = 327

 Score = 87.4 bits (215), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLL 55
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++      T++H E   +
Sbjct: 178 MKGMGQIISWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFI 237

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           E+A+       G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +
Sbjct: 238 ELAFE----VGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVE 293

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + A
Sbjct: 294 HTNFFENRATEYSKAA 309


>gi|157803769|ref|YP_001492318.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
 gi|157785032|gb|ABV73533.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
          Length = 324

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLL 55
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++      T++H E   +
Sbjct: 178 MKGMGQVIAWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYGACTTIVHFEDAFI 237

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           E+A+       G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +
Sbjct: 238 ELAFE----VGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVE 293

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + A
Sbjct: 294 HTNFFENRATEYSKAA 309


>gi|187932511|ref|YP_001884520.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum B str. Eklund 17B]
 gi|187720664|gb|ACD21885.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B str. Eklund 17B]
          Length = 344

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 2/135 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ ENP  +T + + + R M+H     EI + 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNIIKELQSENPESFTADLKNELREMMHIGVENEILWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-N 118
           H  +     G+N    E Y++++ N+R  +IGLEPLF  Y ENP  W+  V +    K +
Sbjct: 266 HYVIGDKIQGINKKLIEDYIKYLGNKRLKEIGLEPLFSGYEENPATWVDVVANSNSVKTD 325

Query: 119 FFETRVTEYQQGAGL 133
           FFE + T Y + + L
Sbjct: 326 FFEAKSTAYAKVSTL 340


>gi|157964544|ref|YP_001499368.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           massiliae MTU5]
 gi|157844320|gb|ABV84821.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           massiliae MTU5]
          Length = 336

 Score = 87.4 bits (215), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLL 55
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++      T++H E   +
Sbjct: 179 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFI 238

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           E+A+       G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +
Sbjct: 239 ELAFE----VGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVE 294

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + A
Sbjct: 295 HTNFFENRATEYSKAA 310


>gi|15892574|ref|NP_360288.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           conorii str. Malish 7]
 gi|34580440|ref|ZP_00141920.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157828524|ref|YP_001494766.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165933242|ref|YP_001650031.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. Iowa]
 gi|229586746|ref|YP_002845247.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           africae ESF-5]
 gi|238650260|ref|YP_002916112.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
 gi|15619738|gb|AAL03189.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia conorii
           str. Malish 7]
 gi|28261825|gb|EAA25329.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157801005|gb|ABV76258.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165908329|gb|ABY72625.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           rickettsii str. Iowa]
 gi|228021796|gb|ACP53504.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia africae
           ESF-5]
 gi|238624358|gb|ACR47064.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
          Length = 328

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLL 55
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++      T++H E   +
Sbjct: 178 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFI 237

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           E+A+       G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +
Sbjct: 238 ELAFE----VGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVE 293

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + A
Sbjct: 294 HTNFFENRTTEYSKAA 309


>gi|67459102|ref|YP_246726.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia felis
           URRWXCal2]
 gi|67004635|gb|AAY61561.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia felis
           URRWXCal2]
          Length = 327

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLL 55
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++      T++H E   +
Sbjct: 178 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFI 237

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           E+A+       G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +
Sbjct: 238 ELAFE----VGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVE 293

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + A
Sbjct: 294 HTNFFENRATEYSKAA 309


>gi|31322342|gb|AAP15464.1| ribonucleotide reductase small subunit [Rickettsia rickettsii str.
           'Sheila Smith']
          Length = 336

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLL 55
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++      T++H E   +
Sbjct: 186 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFI 245

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           E+A+       G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +
Sbjct: 246 ELAFE----VGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVE 301

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + A
Sbjct: 302 HTNFFENRTTEYSKAA 317


>gi|15604372|ref|NP_220888.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           prowazekii str. Madrid E]
 gi|51473694|ref|YP_067451.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia typhi
           str. Wilmington]
 gi|3861064|emb|CAA14964.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (nrdB) [Rickettsia
           prowazekii]
 gi|51460006|gb|AAU03969.1| Ribonucleotide reductase [Rickettsia typhi str. Wilmington]
 gi|292572126|gb|ADE30041.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           prowazekii Rp22]
          Length = 324

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLL 55
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++      T++H E   +
Sbjct: 178 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFI 237

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           E+A+       G  GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +
Sbjct: 238 ELAFE----VGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVE 293

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + A
Sbjct: 294 HTNFFENRATEYSKAA 309


>gi|114327552|ref|YP_744709.1| ribonucleotide-diphosphate reductase subunit beta [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315726|gb|ABI61786.1| ribonucleoside-diphosphate reductase beta chain [Granulibacter
           bethesdensis CGDNIH1]
          Length = 339

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 78/136 (57%), Gaps = 9/136 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTML-----HEATLLEI 57
           G+ +   + +RDE+LH    I + +    EN  +WT++ +Q+ R +      HE   +++
Sbjct: 200 GMGQIVSWSVRDETLHCLSIIKLFHVFIDENREIWTEDLRQEIRQICATIVEHEDAFIDL 259

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
           A+   ++     GL+A   + Y+++IA+RR  Q+GLEPLF    NP PW+ ++++  +  
Sbjct: 260 AFELGSVE----GLDAAQVKSYIRYIADRRLIQLGLEPLFHVERNPLPWIDDMLNAVEHA 315

Query: 118 NFFETRVTEYQQGAGL 133
           NFFE R TEY + + +
Sbjct: 316 NFFENRATEYSRASTV 331


>gi|182436093|ref|YP_001823812.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326776718|ref|ZP_08235983.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178464609|dbj|BAG19129.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326657051|gb|EGE41897.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 338

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDALQQQVTDMLKEAVEAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  QY++ +A++R  ++G  P    +ENPF +M E+  +++  NFFE 
Sbjct: 262 LCGEGLPGMNTESMRQYLECVADQRLARLGF-PTVYGSENPFSFM-ELQGVQELTNFFER 319

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 320 RPSAYQ 325


>gi|254384639|ref|ZP_04999978.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
 gi|194343523|gb|EDX24489.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
          Length = 338

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 75/126 (59%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVDAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 262 LCGDGLPGMNTESMREYLECVADQRLVRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFER 319

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 320 RPSAYQ 325


>gi|302536805|ref|ZP_07289147.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
 gi|302445700|gb|EFL17516.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
          Length = 356

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 75/126 (59%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +
Sbjct: 220 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFGRD 279

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 280 LCGDGLPGMNTDSMREYLECVADQRLVRLGFPPVYG-SQNPFSFM-ELQGVQELTNFFER 337

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 338 RPSAYQ 343


>gi|311898297|dbj|BAJ30705.1| putative ribonucleoside-diphosphate reductase subunit beta
           [Kitasatospora setae KM-6054]
          Length = 339

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 77/126 (61%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H++F   V++ ++ E P L+  +  ++   ML EA   E+ +A +
Sbjct: 203 GLATGTNWVFRDESMHMDFAFSVVDTVREEEPDLFDDKMARQVTEMLEEAVEAELQFARD 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  +Y+Q +A++R  ++GL P+   + NPF +M E+ ++++  NFFE 
Sbjct: 263 LCGEGLPGMNTESMREYLQAVADQRLARLGL-PIRYGSTNPFGFM-ELQNVQELTNFFER 320

Query: 123 RVTEYQ 128
           RV+ YQ
Sbjct: 321 RVSAYQ 326


>gi|11544904|emb|CAC17630.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces jumonjinensis]
          Length = 322

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 72/121 (59%), Gaps = 2/121 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +
Sbjct: 203 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLQEAVEAELQFGSD 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 263 LCGDGLPGMNTESMREYLQCVADQRLTRLGFAPVYG-SENPFSFM-ELQGVQELTNFFER 320

Query: 123 R 123
           R
Sbjct: 321 R 321


>gi|296536499|ref|ZP_06898590.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
 gi|296263178|gb|EFH09712.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
          Length = 343

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLL 55
           M G+ +   + +RDE+LH    I +      ENP +WT++ +       +  + HE   +
Sbjct: 187 MKGMGQIVSWSVRDETLHCLSVIRLFRTFIQENPEIWTEQLKADLVEICTTIVEHEDAFI 246

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+       G  G+     +QY++FIA+RR  Q+GLEP +   +NP PW+ E+++  +
Sbjct: 247 DLAFEL----GGVQGMEPEDVKQYIRFIADRRLQQLGLEPHYGTEKNPLPWLDEILNAVE 302

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + +
Sbjct: 303 HMNFFEGRATEYSKAS 318


>gi|149916691|ref|ZP_01905193.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
 gi|149822408|gb|EDM81797.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
          Length = 356

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 2/134 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F   VI+ ++ + P L+  E +     M+ EA   E+A+A +
Sbjct: 220 GLAAGTNWVFRDESAHMAFAFSVIDVVRDQEPELFDAELEAAVVEMIEEAVACEVAFAED 279

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL       Y+++ A++R  ++G+   +  T NP  +M E+ D+ +  NFFE 
Sbjct: 280 LLGLGVAGLTVADLRAYLEYCADQRLQRLGMATRYGST-NPLSFM-ELQDIPELANFFER 337

Query: 123 RVTEYQQGAGLKWD 136
           RV+ YQ G     D
Sbjct: 338 RVSAYQHGVSGTID 351


>gi|108763495|ref|YP_633213.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
           xanthus DK 1622]
 gi|108467375|gb|ABF92560.1| ribonucleoside-diphosphate reductase, beta subunit [Myxococcus
           xanthus DK 1622]
          Length = 349

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 2/131 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F  + I   + E P L+  + ++    ML EA   E  +A +
Sbjct: 209 GLAAGTNWVFRDESAHMAFAFESIQVARKEEPDLFDAQMERDVVAMLREAVECETQFAQD 268

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G +GL+      Y++++A++R   +G+ P+F  T+NP  +M ++ D+++  NFFE 
Sbjct: 269 LLSGGVMGLSVQDMRGYLEYVADQRLQMLGMTPVFG-TKNPLHFM-DLQDVQELTNFFER 326

Query: 123 RVTEYQQGAGL 133
           RV+ YQ   G+
Sbjct: 327 RVSSYQVAVGV 337


>gi|11544907|emb|CAC17632.1| class I ribonucleotide-diphosphate reductase small chain
           [Streptomyces microflavus]
          Length = 321

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 73/121 (60%), Gaps = 2/121 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    Q++   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQEQVTAMLKEAVEAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 262 LCGEGLPGMNTESMREYLQCVADQRLTRLGFAPVYG-SENPFAFM-ELQGVQELTNFFER 319

Query: 123 R 123
           R
Sbjct: 320 R 320


>gi|271967540|ref|YP_003341736.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
 gi|270510715|gb|ACZ88993.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
          Length = 331

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 74/128 (57%), Gaps = 2/128 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+A    ++ RDES+H+ F   V++ ++ E P L+  +   +   M+ EA   E+A+A
Sbjct: 193 LSGLATGTNWVFRDESMHMEFAFSVVDTVRAEEPDLFDDKLGAQVTQMIEEAVEAELAFA 252

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +    G  G+N     QY++++A++R  ++   P+   T NPF +M E+ D+++  NFF
Sbjct: 253 ADLCGDGMSGMNVEQMRQYLEYVADQRLVRLRF-PVRYGTANPFAFM-ELQDVQELANFF 310

Query: 121 ETRVTEYQ 128
           E RV+ YQ
Sbjct: 311 ERRVSAYQ 318


>gi|154250961|ref|YP_001411785.1| ribonucleotide-diphosphate reductase subunit beta [Parvibaculum
           lavamentivorans DS-1]
 gi|154154911|gb|ABS62128.1| Ribonucleoside-diphosphate reductase [Parvibaculum lavamentivorans
           DS-1]
          Length = 319

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 78/136 (57%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLL 55
           M G+ +   +  RDE+LH    + +      ENP +WT+E ++       T++H E   +
Sbjct: 178 MKGMGQIVTWSARDETLHTVSAMKLFRTFVDENPEIWTEELRRDIYKACETIIHHEDAFI 237

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+   ++     GL+A   + Y+++IA+RR  Q+ L+P+++  +NP PWM E+++  +
Sbjct: 238 DLAFEMGSIE----GLSAQEVKNYIRYIADRRLVQLNLQPIYRTEKNPLPWMDEMLNGIE 293

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + +
Sbjct: 294 HTNFFENRATEYSKAS 309


>gi|182419335|ref|ZP_02950587.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237666940|ref|ZP_04526925.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182376666|gb|EDT74238.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237658139|gb|EEP55694.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 344

 Score = 84.3 bits (207), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 2/135 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ EN  L+T+E + + R M+      EI + 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNIIKELQNENAELFTEEIKNELREMMKTGVEQEILWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-N 118
           H  +     G+N    E+Y++++ N+R  +I LEPLF+ +  NP PW+    +    K +
Sbjct: 266 HYVIGDKIQGINKKLIEEYIKYLGNKRLKEINLEPLFEGHDVNPAPWVDRQSNANSVKTD 325

Query: 119 FFETRVTEYQQGAGL 133
           FFE R T Y + A L
Sbjct: 326 FFEARSTAYAKAATL 340


>gi|318060206|ref|ZP_07978929.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actG]
 gi|318077113|ref|ZP_07984445.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actF]
          Length = 345

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 75/126 (59%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + + + + ML  A   E+ +A +
Sbjct: 209 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARD 268

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE 
Sbjct: 269 LCGDGLPGMNTESMREYLQCVADQRLVRLGFSPVYG-SSNPFSFM-ELQGVQELTNFFER 326

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 327 RPSAYQ 332


>gi|302521843|ref|ZP_07274185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
 gi|302430738|gb|EFL02554.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
          Length = 345

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 75/126 (59%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + + + + ML  A   E+ +A +
Sbjct: 209 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARD 268

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE 
Sbjct: 269 LCGDGLPGMNTESMREYLQCVADQRLVRLGFSPVYG-SSNPFSFM-ELQGVQELTNFFER 326

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 327 RPSAYQ 332


>gi|291303011|ref|YP_003514289.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572231|gb|ADD45196.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 338

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 75/130 (57%), Gaps = 2/130 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+NF   V++ ++ E P L+  E  +    M+ EA   E+ +A +
Sbjct: 202 GLATGTNWVFRDESCHMNFAFSVVDVVRNEEPELFDDELTEAVTRMIEEAVAAELQFARD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+     + Y++++A++R  ++G+ P+   ++NPF +M+ + D+++  NFFE 
Sbjct: 262 LCGEGMPGMTVNDMKSYLEYVADQRLTRLGM-PVRYGSKNPFGFMA-LQDVQELTNFFER 319

Query: 123 RVTEYQQGAG 132
           R T YQ   G
Sbjct: 320 RPTAYQVAVG 329


>gi|290957506|ref|YP_003488688.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
 gi|260647032|emb|CBG70131.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
          Length = 355

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 76/126 (60%), Gaps = 2/126 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  +V++ ++ E P L+ +  +Q+   ML EA   E+ +  +
Sbjct: 219 GLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDELLRQQVTDMLKEAVEAELQFGRD 278

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 279 LCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYG-SQNPFSFM-ELQGVQELTNFFER 336

Query: 123 RVTEYQ 128
           R + YQ
Sbjct: 337 RPSAYQ 342


>gi|156087150|ref|XP_001610982.1| ribonucleoside-diphosphate reductase small subunit [Babesia bovis
           T2Bo]
 gi|154798235|gb|EDO07414.1| ribonucleoside-diphosphate reductase small subunit, putative
           [Babesia bovis]
          Length = 339

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 78/133 (58%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +FG  + +++K + P        +  + ++ EA  +E  + 
Sbjct: 202 MPGLTFSNELIARDEGLHADFGCFIYSKLKHKLP-------AECVQQIIKEAVAVERVFV 254

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R    +G+ P++K T+NPF WM E+I ++ + NFF
Sbjct: 255 CDSLPTDLIGMNSMLMAQYIEFVADRLLQALGVPPVYK-TKNPFEWM-ELISVQGKTNFF 312

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   L
Sbjct: 313 EKRVGEYQKSGIL 325


>gi|190572323|ref|YP_001970168.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
 gi|190010245|emb|CAQ43853.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
          Length = 339

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 2/129 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F  + +  ++ E P L+ +E +Q+   ML EA   E+ +A +
Sbjct: 203 GLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDEEMKQQVYDMLAEAIECEVQFAED 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  G++     QY+Q  A++   ++G+E  +    NP P+M E+ D+++  NFFE 
Sbjct: 263 VLSGGVAGISTRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFFER 320

Query: 123 RVTEYQQGA 131
           RV+ YQ G 
Sbjct: 321 RVSAYQVGV 329


>gi|226950223|ref|YP_002805314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
 gi|226843961|gb|ACO86627.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
          Length = 342

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K ENPH++T+E +++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIKELKNENPHIFTEELEEEFRQMMRIGVEHEIQWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +
Sbjct: 262 QYVTNNEILGLNDELIEKYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|254521240|ref|ZP_05133295.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
 gi|219718831|gb|EED37356.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
          Length = 339

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 2/129 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F  + +  ++ E P L+  E +Q+   ML EA   E+ +A +
Sbjct: 203 GLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDDEMKQQVYDMLAEAIECEVQFAED 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  G++     QY+Q  A++   ++G+E  +    NP P+M E+ D+++  NFFE 
Sbjct: 263 VLSGGVAGISTRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFFER 320

Query: 123 RVTEYQQGA 131
           RV+ YQ G 
Sbjct: 321 RVSAYQVGV 329


>gi|325119319|emb|CBZ54873.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
          Length = 392

 Score = 83.6 bits (205), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 10/136 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+ 
Sbjct: 255 MPGLTFSNELISRDEGLHADFACLLYSQLKNKLP-------DKVVQDMVREAVTVERAFI 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N  S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFF
Sbjct: 308 CEALPVDLIGMNNRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFF 365

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+ AG+  D
Sbjct: 366 EKRVGEYQK-AGVMAD 380


>gi|91205547|ref|YP_537902.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii RML369-C]
 gi|91069091|gb|ABE04813.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia bellii
           RML369-C]
          Length = 324

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 7/135 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLE 56
           M G+ +   + +RDE+LH N  I +      ENP +WT+  + +      T++H      
Sbjct: 178 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAF- 236

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 116
           IA A E    G  GL A     Y+++IA+RR  Q+GL+ ++    NP PW+ E+++  + 
Sbjct: 237 IALAFEV--GGIEGLTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEH 294

Query: 117 KNFFETRVTEYQQGA 131
            NFFE R TEY + A
Sbjct: 295 TNFFENRATEYSKAA 309


>gi|157827263|ref|YP_001496327.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
 gi|157802567|gb|ABV79290.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
          Length = 324

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 7/135 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLE 56
           M G+ +   + +RDE+LH N  I +      ENP +WT+  + +      T++H      
Sbjct: 178 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAF- 236

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 116
           IA A E    G  GL A     Y+++IA+RR  Q+GL+ ++    NP PW+ E+++  + 
Sbjct: 237 IALAFEV--GGIEGLTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEH 294

Query: 117 KNFFETRVTEYQQGA 131
            NFFE R TEY + A
Sbjct: 295 TNFFENRATEYSKAA 309


>gi|221480670|gb|EEE19110.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii GT1]
          Length = 391

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 10/136 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+ 
Sbjct: 254 MPGLTFSNELISRDEGLHADFACLLYSQLKHKLP-------DKVVQDMVREAVTVERAFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N  S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFF
Sbjct: 307 CEALPVDLIGMNNRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFF 364

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+ AG+  D
Sbjct: 365 EKRVGEYQK-AGVMAD 379


>gi|237845387|ref|XP_002371991.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|211969655|gb|EEB04851.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|221501644|gb|EEE27410.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii VEG]
          Length = 391

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 77/136 (56%), Gaps = 10/136 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+ 
Sbjct: 254 MPGLTFSNELISRDEGLHADFACLLYSQLKHKLP-------DKVVQDMVREAVTVERAFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N  S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFF
Sbjct: 307 CEALPVDLIGMNNRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFF 364

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+ AG+  D
Sbjct: 365 EKRVGEYQK-AGVMAD 379


>gi|152993970|ref|YP_001359691.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurovum sp.
           NBC37-1]
 gi|151425831|dbj|BAF73334.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
          Length = 339

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN  K E P L+TKE       M  +A  LE  + 
Sbjct: 203 MLGTAQMIRFIQRDEVTHLLLFQNMINATKRERPELFTKELIDDVYQMFRDAVKLECEWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL     EQY+Q++A++R H +GLE ++   E+P  W+        +K NF
Sbjct: 263 TYITQGQILGLTNEIIEQYIQYLADKRLHAVGLEKIYN-VEHPIKWVDNFSQFNDQKTNF 321

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 322 FEGNVTNYSKGS 333


>gi|840719|emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana]
          Length = 340

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +I+ +++  P        +K   ++HEA  +E  + 
Sbjct: 199 MPGLTFSNELISRDEGLHCDFACLLISLLQLHVP-------LEKVYQIVHEAVEIETEFV 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFF
Sbjct: 252 CKALPCDLIGMNSNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFF 309

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 310 EKRVGEYQKAS 320


>gi|15896521|ref|NP_349870.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum ATCC 824]
 gi|15026352|gb|AAK81210.1|AE007823_4 Ribonucleotide reductase beta subunit [Clostridium acetobutylicum
           ATCC 824]
 gi|325510679|gb|ADZ22315.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum EA 2018]
          Length = 344

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 75/135 (55%), Gaps = 2/135 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P ++T+E +++ + M+      EI + 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNIIKELQKEEPDMFTEEIKKELKDMVKTGVENEITWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-N 118
           H  +     G+N    E Y++++ NRR   IG EP+++ Y ENP  W+    D    K +
Sbjct: 266 HYVIGDNIQGINKKLIEDYIKYLGNRRLEAIGFEPIYEGYDENPALWVDIYADANSVKTD 325

Query: 119 FFETRVTEYQQGAGL 133
           FFE + T Y + + L
Sbjct: 326 FFEAKSTAYAKASTL 340


>gi|194363985|ref|YP_002026595.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
 gi|194346789|gb|ACF49912.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
          Length = 339

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 2/129 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H++F  + ++ I+ E P L+  + +Q    ML EA   E+ +A +
Sbjct: 203 GLASGTNWVFRDESAHMDFAFECVDVIREEEPDLFDDKMKQDVYDMLAEAIECEVQFAED 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  G++     QY+Q  A+   H++G+E  +    NP  +M E+ D+++  NFFE 
Sbjct: 263 VLSGGVAGISTRDMRQYLQHCADNHFHRLGMERKYN-VRNPLSFM-ELQDVQELTNFFER 320

Query: 123 RVTEYQQGA 131
           R + YQ G 
Sbjct: 321 RASAYQVGV 329


>gi|313894221|ref|ZP_07827786.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
 gi|313441045|gb|EFR59472.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
          Length = 342

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I +++ E P L+T E ++K   M+ + T  EIA+ 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEEKITDMIRQGTENEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +
Sbjct: 262 QYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|152989800|ref|YP_001355522.1| ribonucleotide-diphosphate reductase subunit beta [Nitratiruptor
           sp. SB155-2]
 gi|151421661|dbj|BAF69165.1| ribonucleoside-diphosphate reductase, beta subunit [Nitratiruptor
           sp. SB155-2]
          Length = 341

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN +K E P L+TKE       M   A  LE ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLLIFQNMINTVKKERPELFTKELIDDVYKMFEGAVDLETSWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL     EQY++++A+ R  ++GLEP++   E+P  W+ +      +K NF
Sbjct: 265 KYITQGQILGLTDEIIEQYIKYLADDRLKRVGLEPMYN-VEHPIKWVDDFSKFNDQKTNF 323

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 324 FEGNVTNYSKGS 335


>gi|56416698|ref|YP_153772.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. St. Maries]
 gi|254994906|ref|ZP_05277096.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Mississippi]
 gi|255003042|ref|ZP_05278006.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Puerto Rico]
 gi|255004164|ref|ZP_05278965.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Virginia]
 gi|56387930|gb|AAV86517.1| ribonuceoside-diphosphate reductase beta chain [Anaplasma marginale
           str. St. Maries]
          Length = 324

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 1/132 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH    I + N    EN  +W +  +++          LE  + 
Sbjct: 181 MKGMGQIIAWSARDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFI 240

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V GL+A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NF
Sbjct: 241 DLAFALGDVEGLSAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGA 131
           FE RVTEY + A
Sbjct: 301 FENRVTEYSRAA 312


>gi|222475064|ref|YP_002563479.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
 gi|222419200|gb|ACM49223.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
          Length = 343

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 1/132 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH    I + N    EN  +W +  +++          LE  + 
Sbjct: 200 MKGMGQIIAWSARDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFI 259

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V GL+A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NF
Sbjct: 260 DLAFALGDVEGLSAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNF 319

Query: 120 FETRVTEYQQGA 131
           FE RVTEY + A
Sbjct: 320 FENRVTEYSRAA 331


>gi|51891459|ref|YP_074150.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855148|dbj|BAD39306.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
          Length = 346

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 1/137 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A + Q+I RDE  H+    +++N ++ E P L+T +     R M+ +A   E+A+A
Sbjct: 208 MKGTATEIQFINRDEITHVAVFQNILNGLRQERPQLFTPQLDADLRAMIRQAAEHEMAWA 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
              +     GL+    + Y++ +A++R   +G EPL+    NP  W+    +L + K +F
Sbjct: 268 AYCVGNRIQGLSGEVLQGYVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADF 327

Query: 120 FETRVTEYQQGAGLKWD 136
           FETRVT Y +   +  D
Sbjct: 328 FETRVTNYAKSTNIDLD 344


>gi|229827460|ref|ZP_04453529.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
 gi|229788398|gb|EEP24512.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
          Length = 354

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++  ENP ++T E + + R M+   TL EI + 
Sbjct: 214 MTATSTIFKYINRDEITHLVLFQNIIRELMKENPEIFTDELKGELREMVKVGTLNEIEWG 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +G+N    E+Y+++++N R   IGL   F + TENP  W+    +L   K +
Sbjct: 274 QYVTNNEILGINNELIERYIKYLSNLRLRAIGLPVWFPEITENPMAWIESFSNLNATKTD 333

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 334 FFEAKVTNYTKAAAFDFD 351


>gi|294794440|ref|ZP_06759576.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
 gi|294454770|gb|EFG23143.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
          Length = 342

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I +++ E P L+T E + K   M+ + T  EIA+ 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGTENEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +
Sbjct: 262 QYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|88658048|ref|YP_507564.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           chaffeensis str. Arkansas]
 gi|88599505|gb|ABD44974.1| ribonucleoside-diphosphate reductase, beta subunit [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 324

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + N    EN  +W    +Q+    L+EA  + ++  
Sbjct: 181 MKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDDSLKQE----LYEACRIIVSLE 236

Query: 61  HETMPKGFV-----GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
            E +   F      GL++   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +
Sbjct: 237 DEFINLAFACGDVEGLSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVE 296

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE RVTEY + A
Sbjct: 297 HTNFFENRVTEYARAA 312


>gi|68171256|ref|ZP_00544659.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999338|gb|EAM85984.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 294

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + N    EN  +W    +Q+    L+EA  + ++  
Sbjct: 151 MKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDDSLKQE----LYEACRIIVSLE 206

Query: 61  HETMPKGFV-----GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
            E +   F      GL++   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +
Sbjct: 207 DEFINLAFACGDVEGLSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVE 266

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE RVTEY + A
Sbjct: 267 HTNFFENRVTEYARAA 282


>gi|269958883|ref|YP_003328672.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
 gi|269848714|gb|ACZ49358.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
          Length = 332

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH    I + N    EN  +W        R  L+ A  + ++  
Sbjct: 189 MKGMGQIIAWSARDETLHTESIIRLFNTFIHENQEIWDANL----RAELYGACRVIVSLE 244

Query: 61  HETMPKGFV-----GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
            E +   F      GL+A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +
Sbjct: 245 DEFIDLAFALGDVEGLSASEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVE 304

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE RVTEY + A
Sbjct: 305 HTNFFENRVTEYSRAA 320


>gi|162452149|ref|YP_001614516.1| ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
 gi|161162731|emb|CAN94036.1| Ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
          Length = 339

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F  +V++  + E P L+     +    M+ EA   E  +A +
Sbjct: 203 GLAAGTSWVFRDESAHMRFAFEVVSTARREEPELFDAGLARSILDMMDEAIACEARFAED 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  G++A    +Y++F A++R   +G+ P     +NPF +M ++ D+++  NFFE 
Sbjct: 263 LLGAGVAGMSARDVRRYLEFCADQRLATLGM-PKRYGAKNPFSFM-DLQDVQEVTNFFER 320

Query: 123 RVTEYQQG 130
           RV+ YQ G
Sbjct: 321 RVSAYQVG 328


>gi|57239055|ref|YP_180191.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|15811135|gb|AAL08816.1|AF308664_1 hypothetical ribonucleoside reductase beta chain [Ehrlichia
           ruminantium]
 gi|57161134|emb|CAH58047.1| putative ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 324

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + N    EN  +W  + +++    L+EA  + +   
Sbjct: 181 MKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDDDLKKE----LYEACSVIVTLE 236

Query: 61  HETMPKGFV-----GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
            E +   F      GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +
Sbjct: 237 DEFINLAFACGDVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVE 296

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE RVTEY + A
Sbjct: 297 HTNFFENRVTEYTRAA 312


>gi|153940168|ref|YP_001392091.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|170756361|ref|YP_001782419.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|152936064|gb|ABS41562.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|169121573|gb|ACA45409.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|322807123|emb|CBZ04697.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Clostridium botulinum H04402 065]
          Length = 342

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K EN H++T+E +++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +
Sbjct: 262 QYVTNNEILGLNDELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|58578998|ref|YP_197210.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|58417624|emb|CAI26828.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 329

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + N    EN  +W  + +++    L+EA  + +   
Sbjct: 186 MKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDDDLKKE----LYEACSVIVTLE 241

Query: 61  HETMPKGFV-----GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
            E +   F      GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +
Sbjct: 242 DEFINLAFACGDVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVE 301

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE RVTEY + A
Sbjct: 302 HTNFFENRVTEYTRAA 317


>gi|282849773|ref|ZP_06259157.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
 gi|282580710|gb|EFB86109.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
          Length = 342

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+ 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    E+Y++++AN R   IGL  L+ +  ENP  W+    +L   K +
Sbjct: 262 QYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKENPMEWIESFSNLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|254456975|ref|ZP_05070403.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
 gi|207085767|gb|EDZ63051.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
          Length = 340

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T + +++   M  EA  LE  + 
Sbjct: 203 MLGSAQMIRFIQRDEVTHLVLFQNLINTLRKERPDLFTDKLKEEVIAMFKEAVQLESEWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL     EQY++F+A+ R   +G E L+  T NP  W+ +      +K NF
Sbjct: 263 KYITQGQILGLTNDIVEQYIKFLADERLTAVGFEKLYNVT-NPIKWVDDFAKFNDQKTNF 321

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 322 FEGTVTNYSKGS 333


>gi|58040422|ref|YP_192386.1| ribonucleotide-diphosphate reductase subunit beta [Gluconobacter
           oxydans 621H]
 gi|58002836|gb|AAW61730.1| Ribonucleoside-diphosphate reductase beta chain [Gluconobacter
           oxydans 621H]
          Length = 339

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 72/130 (55%), Gaps = 1/130 (0%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+ +   + +RDE+LH    I +      EN  +WT EF+++   +       E A+   
Sbjct: 195 GMGQIVSWSVRDETLHCLSMIRLFRTFVRENSEIWTPEFREELTQICRTTVEHEDAFIDL 254

Query: 63  TMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
               G V G+++   ++Y++FIA+RR  Q+GL+P++    NP PW+ ++++  +  NFFE
Sbjct: 255 CFEMGPVEGMSSEDVKRYIRFIADRRLTQLGLDPVYGQESNPLPWIDDMLNAVEHANFFE 314

Query: 122 TRVTEYQQGA 131
            R TEY + +
Sbjct: 315 NRSTEYSRAS 324


>gi|73666936|ref|YP_302952.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia canis
           str. Jake]
 gi|72394077|gb|AAZ68354.1| Ribonucleoside-diphosphate reductase [Ehrlichia canis str. Jake]
          Length = 324

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + N    EN  +W    + +    L+EA  + ++  
Sbjct: 181 MKGMGQIIAWSVRDETLHTESIIRLFNTFVQENYEIWDDSLKHE----LYEACKIIVSLE 236

Query: 61  HETMPKGFV-----GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
            E +   F      GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +
Sbjct: 237 DEFINLAFACGDVEGLSAKEVKKYIRYIANRRLLQLNLEPIYDANKNPLLWLDEILNGVE 296

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE RVTEY + A
Sbjct: 297 HTNFFENRVTEYARAA 312


>gi|168184457|ref|ZP_02619121.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|237796249|ref|YP_002863801.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           botulinum Ba4 str. 657]
 gi|182672468|gb|EDT84429.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|229263158|gb|ACQ54191.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Ba4 str. 657]
          Length = 342

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K EN H++T+E +++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +
Sbjct: 262 QYVTNNEILGLNDELIERYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|150015087|ref|YP_001307341.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           beijerinckii NCIMB 8052]
 gi|149901552|gb|ABR32385.1| Ribonucleoside-diphosphate reductase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 344

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 2/135 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ ENP L+T+E + + R M+      EI + 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNIIKELQNENPELFTEEVKNELRNMMKIGVEQEILWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           H  +     G+N    E Y++++ N+R  +I L PLFK  + NP  W+  + +    K +
Sbjct: 266 HYVIGDKIQGINKQLIENYIKYLGNKRLKEINLSPLFKEQDKNPASWVDTLSNANSVKTD 325

Query: 119 FFETRVTEYQQGAGL 133
           FFE R T Y +   L
Sbjct: 326 FFEARSTAYAKVTTL 340


>gi|58617056|ref|YP_196255.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Gardel]
 gi|58416668|emb|CAI27781.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Gardel]
          Length = 329

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + N    EN  +W  + +++    L+EA  + +   
Sbjct: 186 MKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDGDLKKE----LYEACSVIVTLE 241

Query: 61  HETMPKGFV-----GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
            E +   F      GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +
Sbjct: 242 DEFINLAFACGDVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVE 301

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE RVTEY + A
Sbjct: 302 HTNFFENRVTEYTRAA 317


>gi|307719930|ref|YP_003891070.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
 gi|306978023|gb|ADN08058.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
          Length = 340

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T E +     M  EA  LE  + 
Sbjct: 203 MLGSAQMIRFIQRDEVTHLVLFQNLINTLRKERPDLFTDELRADVIEMFKEAVKLETEWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL     EQY+Q++A+ R + +G + L+  + NP  W+ +      +K NF
Sbjct: 263 KYITQGQILGLTDEIVEQYIQYLADDRLNSVGFDKLYNVS-NPIKWVDDFAKFNDQKTNF 321

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 322 FEGTVTNYSKGS 333


>gi|148380773|ref|YP_001255314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 3502]
 gi|153932443|ref|YP_001385057.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|153934989|ref|YP_001388527.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
 gi|148290257|emb|CAL84376.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           botulinum A str. ATCC 3502]
 gi|152928487|gb|ABS33987.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|152930903|gb|ABS36402.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
          Length = 342

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K EN H++T+E +++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIKELKNENLHIFTEELEEEFRQMMRMGVEHEIQWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +
Sbjct: 262 QYVTNNEILGLNDELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|269798663|ref|YP_003312563.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294792661|ref|ZP_06757808.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
 gi|269095292|gb|ACZ25283.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294456560|gb|EFG24923.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
          Length = 342

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+ 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +
Sbjct: 262 QYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|170761039|ref|YP_001788131.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169408028|gb|ACA56439.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 342

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K EN H++T+E +++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +
Sbjct: 262 QYVTNNEILGLNDELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDGFSKLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|253827828|ref|ZP_04870713.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313142391|ref|ZP_07804584.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
 gi|253511234|gb|EES89893.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313131422|gb|EFR49039.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 341

 Score = 80.1 bits (196), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 75/132 (56%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN +K E+P L+TK+ +++   M  EA  +E A+ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   ++Y++++A+ R  +IGL  L+   ++P  W+       ++K NF
Sbjct: 265 EYITQGQILGLTSEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNF 323

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 324 FEGNVTNYAKGS 335


>gi|303228685|ref|ZP_07315510.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
 gi|303230495|ref|ZP_07317254.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302514861|gb|EFL56844.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302516665|gb|EFL58582.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
          Length = 342

 Score = 80.1 bits (196), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+ 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +
Sbjct: 262 QYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|238018468|ref|ZP_04598894.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
 gi|237864939|gb|EEP66229.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
          Length = 342

 Score = 80.1 bits (196), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+ 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    E+Y++++AN R   IGL  L+ +  +NP  W+    +L   K +
Sbjct: 262 QYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|224418874|ref|ZP_03656880.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 340

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 75/132 (56%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN +K E+P L+TK+ +++   M  EA  +E A+ 
Sbjct: 204 MLGSAQMIRFIQRDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   ++Y++++A+ R  +IGL  L+   ++P  W+       ++K NF
Sbjct: 264 EYITQGQILGLTSEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNF 322

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 323 FEGNVTNYAKGS 334


>gi|78776214|ref|YP_392529.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurimonas
           denitrificans DSM 1251]
 gi|78496754|gb|ABB43294.1| Ribonucleoside-diphosphate reductase [Sulfurimonas denitrificans
           DSM 1251]
          Length = 340

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+ ++ +++   M  EA  LE+A+ 
Sbjct: 203 MLGSAQMIRFIQRDEVTHLVLFQNLINSLRKERPDLFNEKLKEEVIEMFKEAVALEVAWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL     EQY+Q++A+ R   +G   L+  T NP  W+ +      +K NF
Sbjct: 263 KYITGGQILGLTDAIIEQYIQYLADDRLTSVGFAKLYNVT-NPIKWVDDFSKFNDQKTNF 321

Query: 120 FETRVTEYQQGA 131
           FE  V  Y +G+
Sbjct: 322 FEGTVANYSKGS 333


>gi|242309209|ref|ZP_04808364.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
 gi|239524250|gb|EEQ64116.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
          Length = 341

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 74/132 (56%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN  K E+P  +TK+ +++   M  EA  +EIA+ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLLLFQNMINSTKKESPEFFTKDLEEEVLEMFREAVKVEIAWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL A   ++Y++++A+ R  ++GL P+    ++P  W+       ++K NF
Sbjct: 265 EYITQGQILGLTAEIIQEYIKYLADDRLRRVGL-PVLYNAKHPIKWVDSFSSFNEQKTNF 323

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 324 FEGNVTNYAKGS 335


>gi|225432510|ref|XP_002279943.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 340

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ + P  W     QK   ++HEA  +E  + 
Sbjct: 200 MPGLTFSNELISRDEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAVEIETQFV 252

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA    QY++F+A+R    +G E  +   ENPF WM E I L+ + NFF
Sbjct: 253 CEALPCALIGMNATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQGKANFF 310

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 311 ERRVGDYQKAS 321


>gi|313683656|ref|YP_004061394.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
 gi|313156516|gb|ADR35194.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
          Length = 339

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T+E  ++   M  +A  LE A+ 
Sbjct: 203 MLGSAQMIRFIQRDEVTHLVLFQNIINTLRRERSDLFTEELIEEVYDMFRKAVELETAWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL     EQY+Q++A++R   +GL+PL+  + +P  W+ +      +K NF
Sbjct: 263 KYITQGQILGLTNEIVEQYIQYLADQRLTAVGLKPLYNVS-HPIKWVDDFSKFNDQKTNF 321

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 322 FEGTVTNYSKGS 333


>gi|168179222|ref|ZP_02613886.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
 gi|182669722|gb|EDT81698.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
          Length = 342

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   +  ++YI RDE  HL    ++I ++K EN H++T+E +++ R M+      EI + 
Sbjct: 202 LTATSTIFKYINRDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    E+Y+++++N R   IGL+PL+ +  ++P  W+     L   K +
Sbjct: 262 QYVTNNEILGLNDELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|224000239|ref|XP_002289792.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975000|gb|EED93329.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 78/131 (59%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +++K+       K  Q++ +T+++EA  +E ++ 
Sbjct: 185 MPGLTFSNELISRDEGLHCSFACQLYSKLKL-------KLSQEEIQTIINEAVDVEKSFI 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G + ++  ++NPF WM ++I L+ + NFF
Sbjct: 238 CDALPVSLIGMNSRLMAQYIEFVADRMLTDLGYQAMYG-SKNPFDWM-DMISLEGKTNFF 295

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 296 EKRVGEYQKSG 306


>gi|219110949|ref|XP_002177226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411761|gb|EEC51689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 409

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 17/133 (12%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLE 56
           M G+    + I RDE LH +F              L++K  ++ S T +H    EA  +E
Sbjct: 266 MPGLTFSNELISRDEGLHCSFAC-----------QLYSKLERKLSETDMHKLIGEAVEVE 314

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 116
             +  + +P G +G+NA    QY++F+A+R  H +G   L+  ++NPF WM ++I L+ +
Sbjct: 315 KGFVCDALPVGLIGMNASLMSQYVEFVADRLLHDLGYRTLYG-SKNPFDWM-DMISLEGK 372

Query: 117 KNFFETRVTEYQQ 129
            NFFE RV EYQ+
Sbjct: 373 TNFFEKRVGEYQK 385


>gi|15229476|ref|NP_189000.1| RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate
           reductase [Arabidopsis thaliana]
 gi|27735240|sp|P50651|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A;
           AltName: Full=Ribonucleoside-diphosphate reductase R2A
           subunit; Short=AtRNR2; Short=Protein R2at; AltName:
           Full=Ribonucleotide reductase small subunit A
 gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana]
 gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana]
          Length = 341

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ + P        +K   ++HEA  +E  + 
Sbjct: 200 MPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPL-------EKVYQIVHEAVEIETEFV 252

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFF
Sbjct: 253 CKALPCDLIGMNSNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFF 310

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 311 EKRVGEYQKAS 321


>gi|257067181|ref|YP_003153437.1| ribonucleotide-diphosphate reductase subunit beta [Anaerococcus
           prevotii DSM 20548]
 gi|256799061|gb|ACV29716.1| Ribonucleoside-diphosphate reductase [Anaerococcus prevotii DSM
           20548]
          Length = 352

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +IN +K E   L+  E Q   R ML E    EIA+ 
Sbjct: 212 MPGTVQEIRYINRDENTHLWLFRSLINDLKKEREDLFVPELQNYYREMLKEGVEQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
             ++     GLN    E Y++++ N R   +GLEPL++ Y E P    W+ E  D    K
Sbjct: 272 KYSIGNSIAGLNEKMIEDYIKYLGNLRAKGLGLEPLYEGYKEIPESMKWVDEYSDPNGVK 331

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE +VT Y + + ++ D
Sbjct: 332 TDFFEAKVTAYSKSSIIEDD 351


>gi|297831106|ref|XP_002883435.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
 gi|297329275|gb|EFH59694.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
          Length = 341

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ + P        +K   ++HEA  +E  + 
Sbjct: 200 MPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPL-------EKVYQIVHEAVEIETEFV 252

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFF
Sbjct: 253 CKALPCDLIGMNSNLMSQYIQFVADRLLVTLGCERRYK-AENPFDWM-EFISLQGKTNFF 310

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 311 EKRVGEYQKAS 321


>gi|118443949|ref|YP_878438.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
 gi|118134405|gb|ABK61449.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
          Length = 342

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K ENP ++T+   ++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEITHLILFQNIIKELKNENPDIFTESIMEEFRMMMKMGVEHEIKWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +G+N    E+Y+++++N R + IGLE L+ + TE+P  W+     L   K +
Sbjct: 262 QYVTNNEILGINDNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|326792202|ref|YP_004310023.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
 gi|326542966|gb|ADZ84825.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
          Length = 342

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K ENP L+T+   ++ R M+      EIA+ 
Sbjct: 202 MTATSTIFKYINRDEITHLVVFQNIIKELKKENPELFTESMIEEFREMMRVGVEHEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +G+N    + Y+++++N+R   IGLE L+ + T +P  W+     L   K +
Sbjct: 262 QYVTANEIMGINDQLIDAYIKYLSNQRLKAIGLEELYPEITTHPMAWIDSFSKLNNTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|227498392|ref|ZP_03928542.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
 gi|226903854|gb|EEH89772.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
          Length = 342

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    +++ +++ E P L+TKE       M+ +    EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLILFQNILRELRHERPDLFTKEQDAHIADMIRQGAENEIKWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    E+Y++++AN R   IGL PL+ + ++NP  W+    +L   K +
Sbjct: 262 QYITDDKILGLNNGLIEKYIKYLANIRLEAIGLAPLYPEISQNPMEWIESFSNLNGTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|227485717|ref|ZP_03916033.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
 gi|227236272|gb|EEI86287.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
          Length = 352

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +IN +K E P L+T E     R ML E    EI + 
Sbjct: 212 MPGTVQEIRYINRDENTHLWLFRSLINDLKKERPDLFTPEATIVYRDMLKEGVRQEIEWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GL+    E Y++++ N R   +G +PLF+ YTE P    W+ E  D  + K
Sbjct: 272 KYAIGDNIAGLSTTMIEDYIKYLGNLRAKGLGFDPLFEGYTEIPQSMKWVDEYSDPNRVK 331

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE +VT Y + + ++ D
Sbjct: 332 TDFFEAKVTAYSKSSIIEDD 351


>gi|224438210|ref|ZP_03659145.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313144656|ref|ZP_07806849.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313129687|gb|EFR47304.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
          Length = 348

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL     +IN ++ E PHL+T   +++   M  +A  +E  + 
Sbjct: 212 MLGSAQMIRFIQRDEVTHLLVFQQMINALRKEQPHLFTPSLEEEVIAMFQKAVEIESVWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL A    +Y+Q++A+ R   +GL  ++ +++NP  W+ +      +K NF
Sbjct: 272 EYITQGQILGLTAEIIREYIQYLADMRLRAVGLREIY-HSKNPIKWVEQFASFNDQKTNF 330

Query: 120 FETRVTEYQQGA 131
           FE +VT Y +G+
Sbjct: 331 FEAKVTNYSKGS 342


>gi|225012154|ref|ZP_03702591.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
 gi|225003709|gb|EEG41682.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
          Length = 325

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F +       + N HL  K    + + +L +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGVHCDFAV------HLHNHHLVNKVPPARIKEILLDALTIEREFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++GLE  F  T NPF +M ++I L+ + NFF
Sbjct: 240 TESLPISLIGMNAKLMTQYLEFVTDRLLQELGLEKEFNVT-NPFDFM-DMISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   L
Sbjct: 298 EKRVGEYQKAGVL 310


>gi|257456224|ref|ZP_05621421.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
 gi|257446310|gb|EEV21356.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
          Length = 351

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I++++ E P L+T E  +  R+M+ E    EIA+ 
Sbjct: 211 MPGSVQEIRYINRDENTHLWLFRSIIHELQKEEPQLFTPENNELFRSMIREGCEQEIAWG 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
           H  +     GL       Y+Q++ N RC  +G EPL++ + E P    W+S+  +    K
Sbjct: 271 HYVIGDDIPGLTRGMVTDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIK 330

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + LK D
Sbjct: 331 TDFFEAKSTAYAKSSALKDD 350


>gi|254374389|ref|ZP_04989871.1| glutaredoxin [Francisella novicida GA99-3548]
 gi|151572109|gb|EDN37763.1| glutaredoxin [Francisella novicida GA99-3548]
          Length = 410

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 4/139 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFI 327

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGAGL--KWD 136
           FE RVTEY+  AGL   WD
Sbjct: 388 FENRVTEYEV-AGLTGSWD 405


>gi|118497575|ref|YP_898625.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. novicida
           U112]
 gi|195536272|ref|ZP_03079279.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208779374|ref|ZP_03246720.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
 gi|254372936|ref|ZP_04988425.1| hypothetical protein FTCG_00507 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|118423481|gb|ABK89871.1| bifunctional protein: glutaredoxin 3 /ribonucleotide reductase beta
           subunit [Francisella novicida U112]
 gi|151570663|gb|EDN36317.1| hypothetical protein FTCG_00507 [Francisella novicida GA99-3549]
 gi|194372749|gb|EDX27460.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208745174|gb|EDZ91472.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
          Length = 410

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 4/139 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFI 327

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGAGL--KWD 136
           FE RVTEY+  AGL   WD
Sbjct: 388 FENRVTEYEV-AGLTGSWD 405


>gi|325478871|gb|EGC81981.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 352

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +IN ++ E   L+TKE ++  R ML E    EIA+ 
Sbjct: 212 MPGTVQEIRYINRDENTHLWLFRSLINDLRKEREDLFTKEHKEYYRNMLKEGVEQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GL+    E Y++++ N R   +GLE L++ YTE P    W+ E  D    K
Sbjct: 272 KYAIGDNIAGLSEKMIEDYIKYLGNLRAKGLGLEALYEGYTEIPDSMKWVDEYSDPNAVK 331

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE +VT Y + + ++ D
Sbjct: 332 TDFFEAKVTAYSKSSIIEDD 351


>gi|212723480|ref|NP_001131892.1| hypothetical protein LOC100193273 [Zea mays]
 gi|194692834|gb|ACF80501.1| unknown [Zea mays]
 gi|195624040|gb|ACG33850.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++       +K  + + RT++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYDVLR-------SKLDEARVRTIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++  T NPF WM E+I L+ + NFF
Sbjct: 250 CDALPVSLVGMNGDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLQGKTNFF 307

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 308 EKRVGDYQKAS 318


>gi|89256330|ref|YP_513692.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314778|ref|YP_763501.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502403|ref|YP_001428469.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010840|ref|ZP_02275771.1| ribonucleotide-diphosphate reductase beta subunit [Francisella
           tularensis subsp. holarctica FSC200]
 gi|254367665|ref|ZP_04983686.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|290952877|ref|ZP_06557498.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313922|ref|ZP_06804487.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144161|emb|CAJ79423.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica LVS]
 gi|115129677|gb|ABI82864.1| ribonucleoside-diphosphate reductase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134253476|gb|EBA52570.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|156253006|gb|ABU61512.1| bifunctional glutaredoxin /ribonucleoside-diphosphate reductase
           beta subunit [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 410

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 4/139 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFI 327

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGAGL--KWD 136
           FE RVTEY+  AGL   WD
Sbjct: 388 FENRVTEYEV-AGLTGSWD 405


>gi|56707665|ref|YP_169561.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670136|ref|YP_666693.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           FSC198]
 gi|187931834|ref|YP_001891819.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|224456732|ref|ZP_03665205.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370173|ref|ZP_04986179.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874478|ref|ZP_05247188.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604157|emb|CAG45165.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110320469|emb|CAL08548.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568417|gb|EDN34071.1| hypothetical protein FTBG_01287 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|187712743|gb|ACD31040.1| bifunctional protein: glutaredoxin 3/ribonucleotide reductase beta
           subunit [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|254840477|gb|EET18913.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158827|gb|ADA78218.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 410

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 4/139 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFI 327

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGAGL--KWD 136
           FE RVTEY+  AGL   WD
Sbjct: 388 FENRVTEYEV-AGLTGSWD 405


>gi|254369307|ref|ZP_04985319.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122257|gb|EDO66397.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 410

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 4/139 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFI 327

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGAGL--KWD 136
           FE RVTEY+  AGL   WD
Sbjct: 388 FENRVTEYEV-AGLTGSWD 405


>gi|134301991|ref|YP_001121960.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134049768|gb|ABO46839.1| biofunctional glutaredoxin 3 protein/Ribonucleoside-diphosphate
           reductase beta subunit [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 410

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 4/139 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFI 327

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGAGL--KWD 136
           FE RVTEY+  AGL   WD
Sbjct: 388 FENRVTEYEV-AGLTGSWD 405


>gi|189184364|ref|YP_001938149.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Ikeda]
 gi|189181135|dbj|BAG40915.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Ikeda]
          Length = 359

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 79/144 (54%), Gaps = 14/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR------TMLH-EAT 53
           M G+ +   + +RDE+LH N  I +      E P +WT+  Q KSR      T++H E  
Sbjct: 193 MKGMGQIITWSVRDETLHTNSIITLFKTFIQEYPEVWTE--QLKSRIYEACCTIIHFEDA 250

Query: 54  LLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL 113
            +++A+       G  GL A   ++Y+++IA+RR  Q+GL+  +   +NP  W+ ++++ 
Sbjct: 251 FIDLAFE----VGGVEGLEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNG 306

Query: 114 KKEKNFFETRVTEYQQGAGL-KWD 136
            +  NFFE RVTEY + A    WD
Sbjct: 307 VEHTNFFENRVTEYTRSATTGSWD 330


>gi|57339646|gb|AAW49810.1| hypothetical protein FTT0532 [synthetic construct]
          Length = 445

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 4/139 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 294 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFI 353

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 354 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 413

Query: 120 FETRVTEYQQGAGL--KWD 136
           FE RVTEY+  AGL   WD
Sbjct: 414 FENRVTEYEV-AGLTGSWD 431


>gi|148284015|ref|YP_001248105.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Boryong]
 gi|146739454|emb|CAM79093.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Boryong]
          Length = 329

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 79/144 (54%), Gaps = 14/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR------TMLH-EAT 53
           M G+ +   + +RDE+LH N  I +      E P +WT+  Q KSR      T++H E  
Sbjct: 178 MKGMGQIITWSVRDETLHTNSIITLFKTFIQEYPEVWTE--QLKSRIYEACCTIIHFEDA 235

Query: 54  LLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL 113
            +++A+       G  GL A   ++Y+++IA+RR  Q+GL+  +   +NP  W+ ++++ 
Sbjct: 236 FIDLAFE----VGGVEGLEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNG 291

Query: 114 KKEKNFFETRVTEYQQGAGL-KWD 136
            +  NFFE RVTEY + A    WD
Sbjct: 292 VEHTNFFENRVTEYTRSATTGSWD 315


>gi|163753569|ref|ZP_02160692.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
 gi|161325783|gb|EDP97109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
          Length = 326

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 75/133 (56%), Gaps = 8/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F +       + N HL  K  +++ R ++ +A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGVHCDFAV------HLHNNHLVNKVPKERIRAIIVDALNIEREFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++G E  +  + NPF +M ++I L+ + NFF
Sbjct: 241 TESLPVSLIGMNAKLMTQYLEFVTDRLLQELGCEKEYNVS-NPFDFM-DMISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+   L
Sbjct: 299 EKRVSEYQKAGVL 311


>gi|289548460|ref|YP_003473448.1| ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
 gi|289182077|gb|ADC89321.1| Ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
          Length = 342

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+   +Q +YI RDE  H++   ++I  +K ENP L+T E ++  +     A   EI + 
Sbjct: 206 MLSTVQQIKYINRDELTHVSLFRNIILTLKKENPELFTPEMEKWVKEFFRYAASEEIKWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +G+N    ++Y++++AN R  QIG EP+F   TENP  W+     +   K +
Sbjct: 266 QYVTRNQILGINDQLIDRYIKYLANLRLTQIGYEPVFPDVTENPMKWIDTFRTINDTKTD 325

Query: 119 FFETRVTEYQQGAGLKW 135
           FF+ +   Y + + LKW
Sbjct: 326 FFQAKPQTYAKRSELKW 342


>gi|218289144|ref|ZP_03493380.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240727|gb|EED07906.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 345

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G   + ++I RDE  HL    ++ ++I  ENP + T + +++   M+  A   EIA+ 
Sbjct: 206 MLGTVSEIKFIQRDELTHLAIFRNLYHEIVRENPGIVTPDMEEEFVEMMRTAVQHEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   VGL     + Y++++AN R   + L  L+ +  E+P PWM     +   K +
Sbjct: 266 QYVTQGKIVGLTDALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTD 325

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE RVT Y +   L WD
Sbjct: 326 FFEQRVTNYTKAGNLNWD 343


>gi|330814259|ref|YP_004358498.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487354|gb|AEA81759.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 345

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLL 55
           M G+ +   + +RDE+LH N  I + N    ENP L      KE  +   T++ HE   +
Sbjct: 201 MKGMGQIVTWSVRDETLHCNSMIKIFNTFCDENPGLLDDSLKKEIYEACSTIIEHEDAFI 260

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+    +     GL A   ++Y+++IANRR  Q+ L  L++  ENP  W+ ++++  +
Sbjct: 261 DLAFEMGDIE----GLKAEEVKKYIRWIANRRLAQLRLNDLYEVKENPLTWLDDMLNGVE 316

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + +
Sbjct: 317 HMNFFEGRATEYSKAS 332


>gi|262277047|ref|ZP_06054840.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
 gi|262224150|gb|EEY74609.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
          Length = 342

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTML-HEATLL 55
           M G+ +   + +RDE+LH N  I + N    ENP L      KE     RT++ HE   +
Sbjct: 198 MKGMGQVVTWSVRDETLHCNSMIKIFNTFCAENPGLLDESLKKEITDACRTIVEHEDAFI 257

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+  E  P    GL A   + Y+++IANRR  Q+ L+ ++   ENP  W+  +++  +
Sbjct: 258 DLAF--EMGP--IEGLTAQQIKDYIRWIANRRLVQLKLDEIYDVKENPLEWIDTMLNGVE 313

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE R TEY + +
Sbjct: 314 HMNFFEGRATEYSKAS 329


>gi|258511567|ref|YP_003185001.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478293|gb|ACV58612.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 369

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G   + ++I RDE  HL    ++ ++I  ENP + T + +++   M+  A   EIA+ 
Sbjct: 230 MLGTVSEIKFIQRDELTHLAIFRNLYHEIIRENPGIVTPDMEEEFVEMMRTAVQHEIAWG 289

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   VGL     + Y++++AN R   + L  L+ +  E+P PWM     +   K +
Sbjct: 290 QYVTQGKIVGLTDALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTD 349

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE RVT Y +   L WD
Sbjct: 350 FFEQRVTNYTKAGNLNWD 367


>gi|330941351|gb|EGH44203.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 317

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 32/37 (86%), Positives = 36/37 (97%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW 37
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLW 316


>gi|148676854|gb|EDL08801.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
          Length = 297

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  + + R ++ +A  +E  + 
Sbjct: 160 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFL 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 213 TEALPVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFF 270

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 271 EKRVSEYQRFA 281


>gi|195953600|ref|YP_002121890.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933212|gb|ACG57912.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
          Length = 319

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 73/123 (59%), Gaps = 6/123 (4%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQI-KIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            +A   ++I++DE+ HL FGI ++N++ K +N +    +++ K R ++ EA  +E  YA 
Sbjct: 200 NVAALVRWILKDETRHLAFGIYLLNELLKDKNKN----DYKDKFRVLMEEAVDIETEYAR 255

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
             MP+  +GL+  +   Y++++A+RR   +G + ++   +NP  W++   DL    NFFE
Sbjct: 256 VAMPEKIIGLSFETYTSYVKYLADRRMRSLGFDAIYG-QKNPMKWLTTQTDLPDLTNFFE 314

Query: 122 TRV 124
            +V
Sbjct: 315 AKV 317


>gi|41054952|ref|NP_955770.1| ribonucleoside-diphosphate reductase subunit M2 B [Mus musculus]
 gi|81885688|sp|Q6PEE3|RIR2B_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|34786000|gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
 gi|74218244|dbj|BAE23760.1| unnamed protein product [Mus musculus]
          Length = 351

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  + + R ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 325 EKRVSEYQRFA 335


>gi|288817346|ref|YP_003431693.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|288786745|dbj|BAI68492.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|308750953|gb|ADO44436.1| ribonucleotide reductase [Hydrogenobacter thermophilus TK-6]
          Length = 342

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    +Q +YI RDE  H+    ++I  IK ENP L+T E ++        AT  EI + 
Sbjct: 206 MRNTVQQIKYINRDELTHVTLFRNIIQTIKQENPELFTPELEKWVYEFFKYATDAEIKWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +G+N    ++Y++++AN R  Q+G +PL+ + TENP  W+ +   +   K +
Sbjct: 266 QYVTQNQILGINNTLIDRYIKYLANLRLTQLGYKPLYPEITENPMKWIDQFRTINDTKTD 325

Query: 119 FFETRVTEYQQGAGLKW 135
           FF+ +   Y + + LKW
Sbjct: 326 FFQAKPQTYAKRSELKW 342


>gi|114799612|ref|YP_759103.1| ribonucleotide-diphosphate reductase subunit beta [Hyphomonas
           neptunium ATCC 15444]
 gi|114739786|gb|ABI77911.1| ribonucleoside-diphosphate reductase, beta subunit [Hyphomonas
           neptunium ATCC 15444]
          Length = 345

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   + T E +++ R        LE  + 
Sbjct: 186 MKGMGQIVTWSIRDESLHCEGMIKLFHSFCAETGVM-TDELRERIRDCCRTVVALEDKFI 244

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+ A   + Y+++IA+ R +Q+ LEP++  T++P PW++E+++  +  NF
Sbjct: 245 ELAFEMGPVEGMTADDIKNYIRYIADWRLNQLKLEPIYGVTKHPIPWLTEILNGVEHANF 304

Query: 120 FETRVTEYQQGA 131
           FE R TEY +GA
Sbjct: 305 FEQRSTEYSKGA 316


>gi|146298285|ref|YP_001192876.1| ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
 gi|146152703|gb|ABQ03557.1| Ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
          Length = 325

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F +       + N HL  K  +++ + ++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGVHCDFAV------HLHNHHLVNKVPKERIKEIIVDALDIERQFV 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+A+R   ++G E ++  + NPF +M ++I L+ + NFF
Sbjct: 240 TESLPVSLIGMNAGLMTQYLEFVADRLLVELGCERVYG-SANPFDFM-DMISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  D
Sbjct: 298 EKRVAEYQKSGVMNTD 313


>gi|150024561|ref|YP_001295387.1| ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
 gi|149771102|emb|CAL42569.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
          Length = 325

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F +       + N HL  K  +++ R+++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGVHCDFAV------HLHNHHLVNKVPKERIRSIIVDALNIEREFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+A+R   ++G +  +  T NPF +M ++I L+ + NFF
Sbjct: 240 TESLPVSLIGMNAVLMTQYLEFVADRLLVELGCDREYN-TANPFDFM-DMISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLKWD 136
           E +V EYQ+   +  D
Sbjct: 298 EKKVAEYQKAGVMNTD 313


>gi|239502693|ref|ZP_04662003.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
          Length = 309

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M+G A+  +YI RDE   HL+    +++ ++ EN  ++T+ F  K+  +   ++ +EI++
Sbjct: 175 MLGSADMIRYIQRDEEGTHLDLFAHMLDTLRHENKDVFTQSFWNKALEVFLTSSEMEISW 234

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK-KE 116
             + + KG    N  + E Y++ +AN R  QI   P   Y   +NPFPW+ +       E
Sbjct: 235 G-KYITKGVT--NPKAIEDYIKHLANLRAEQIQ-APFVPYPGVKNPFPWVEQFSKPNTSE 290

Query: 117 KNFFETRVTEYQQGAGLKW 135
           KNFFETRVT+Y+ G  L W
Sbjct: 291 KNFFETRVTDYKVGGALVW 309


>gi|322510876|gb|ADX06189.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 2]
          Length = 324

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 76/128 (59%), Gaps = 9/128 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE+LH  F + + N+++        K  ++K R ++ EA  +E  + 
Sbjct: 189 MPGLTFSNELISRDEALHTEFAVYLYNRLE-------KKLNKKKVREIIEEAVTIEKEFI 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R   Q+G + ++  T NPF +M E+I L+++ NFF
Sbjct: 242 VDALPCRMIGMNSELMTQYIEFVADRLMMQLGCDVIYA-TNNPFDFM-ELISLEQKTNFF 299

Query: 121 ETRVTEYQ 128
           E+RV+EY 
Sbjct: 300 ESRVSEYS 307


>gi|332184137|gb|AEE26391.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Francisella cf. novicida 3523]
          Length = 410

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 4/139 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   +F+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFI 327

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGAGL--KWD 136
           FE RVTEY+  AGL   WD
Sbjct: 388 FENRVTEYEV-AGLTGSWD 405


>gi|75076588|sp|Q4R741|RIR2B_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|67969468|dbj|BAE01083.1| unnamed protein product [Macaca fascicularis]
          Length = 351

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVQIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKIFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 325 EKRVSEYQRFA 335


>gi|160881347|ref|YP_001560315.1| ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
 gi|160430013|gb|ABX43576.1| Ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
          Length = 342

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 76/138 (55%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    +++ ++++E   ++TK  +++ R M+      EIA+ 
Sbjct: 202 MTATSTIFKYINRDEITHLVLFQNIMKELRVEQKEMFTKGLEEELREMMRTGVEHEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +G+N    +QY+++++N+R   +GLE L+ + T++P  W+    ++   K +
Sbjct: 262 QYVTDNQILGINNELIDQYIKYLSNQRLRAVGLEILYPEITKHPMEWIESFSNINSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAVFDFD 339


>gi|289177076|ref|NP_001165949.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Homo
           sapiens]
 gi|55631160|ref|XP_528204.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) isoform 3
           [Pan troglodytes]
 gi|42794058|dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form
           [Homo sapiens]
 gi|119612246|gb|EAW91840.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_a [Homo
           sapiens]
          Length = 299

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 162 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 214

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 215 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 272

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 273 EKRVSEYQRFA 283


>gi|189501948|ref|YP_001957665.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497389|gb|ACE05936.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 355

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   +         HL  K  +++ R ++ +A  +E  + 
Sbjct: 214 MPGLSFSNELISRDEGLHCDFACLLYAN------HLQNKLPEERVREIITDAVAIEKEFV 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R   ++G   ++  T NPF +M E+I L+ + NFF
Sbjct: 268 TDALPVKLIGMNADLMSQYIEFVADRLLLELGCSKVYNAT-NPFDFM-EMISLQGKTNFF 325

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   +K
Sbjct: 326 EKRVGEYQKAGVMK 339


>gi|27769295|gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide [Homo sapiens]
          Length = 285

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 148 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 200

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 201 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 258

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 259 EKRVSEYQRFA 269


>gi|42544136|ref|NP_056528.2| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Homo
           sapiens]
 gi|114621161|ref|XP_001153916.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) isoform 2
           [Pan troglodytes]
 gi|74727333|sp|Q7LG56|RIR2B_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|261278726|pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2
 gi|261278727|pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2
 gi|7229086|dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens]
 gi|7229115|dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens]
 gi|45259569|dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo
           sapiens]
 gi|52545612|emb|CAB70703.2| hypothetical protein [Homo sapiens]
 gi|63055293|gb|AAY29059.1| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|80473666|gb|AAI08262.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|109659128|gb|AAI17497.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|119612247|gb|EAW91841.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_b [Homo
           sapiens]
 gi|120660296|gb|AAI30629.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|190689549|gb|ACE86549.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|190690911|gb|ACE87230.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|261859014|dbj|BAI46029.1| ribonucleotide reductase M2 B [synthetic construct]
 gi|313882916|gb|ADR82944.1| ribonucleotide reductase M2 B (TP53 inducible) [synthetic
           construct]
          Length = 351

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 325 EKRVSEYQRFA 335


>gi|197101489|ref|NP_001125944.1| ribonucleoside-diphosphate reductase subunit M2 B [Pongo abelii]
 gi|75041724|sp|Q5R9G0|RIR2B_PONAB RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|55729743|emb|CAH91600.1| hypothetical protein [Pongo abelii]
          Length = 351

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 325 EKRVSEYQRFA 335


>gi|114621164|ref|XP_001153859.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
 gi|119612248|gb|EAW91842.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_c [Homo
           sapiens]
 gi|194385642|dbj|BAG65196.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 160 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 213 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 270

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 271 EKRVSEYQRFA 281


>gi|296227442|ref|XP_002759378.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 2 [Callithrix jacchus]
          Length = 299

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 162 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 214

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G    F+  ENPF +M E I L+ + NFF
Sbjct: 215 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKFFQ-AENPFDFM-ENISLEGKTNFF 272

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 273 EKRVSEYQRFA 283


>gi|7023557|dbj|BAA92005.1| unnamed protein product [Homo sapiens]
          Length = 351

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGVNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 325 EKRVSEYQRFA 335


>gi|118474076|ref|YP_891239.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118413302|gb|ABK81722.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 340

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T E + K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ + R   IGL+ L+   ++P  W+ +      +K NF
Sbjct: 264 KYITGNQIMGFTDDIIEEYIHYLVDDRLTSIGLKKLYN-AKHPIKWVDDFAKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE++VT Y +G+
Sbjct: 323 FESKVTNYSKGS 334


>gi|319942042|ref|ZP_08016361.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
 gi|319804426|gb|EFW01304.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
          Length = 344

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 10/136 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLL 55
           M G+ +   + + DE+LH      +  +   ENP LWT E + K    +  M+  E   +
Sbjct: 200 MKGMGQIIAWSIADETLHTESMTKIFREYITENPELWTDELKAKIYGIAEVMVDLEDKFI 259

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+    M +    L       Y+++IA+RR   +GL+ +FK T NP PW+  ++ +  
Sbjct: 260 DLAFGVSEMKR----LTREDVRSYIRYIADRRLMGLGLKGIFKSTTNPLPWVDAMLGV-T 314

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE RV +Y +GA
Sbjct: 315 HTNFFENRVVDYAKGA 330


>gi|86134368|ref|ZP_01052950.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
 gi|85821231|gb|EAQ42378.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
          Length = 323

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 76/132 (57%), Gaps = 9/132 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE +H +F +       + N H+  +  + + + ++ +A  +E  +  E
Sbjct: 188 GLTFSNELISRDEGMHCDFAV------HLHNNHIVNRVPKDRIKEIIVDALDIEREFVTE 241

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+NA    QY++F+ +R   + G E ++  T NPF +M E+I L+ + NFFE 
Sbjct: 242 SLPVSLIGMNAKLMTQYLEFVTDRLLLEFGCEKVYDVT-NPFDFM-EMISLEGKTNFFEK 299

Query: 123 RVTEYQQGAGLK 134
           RV+EYQ+ AG+K
Sbjct: 300 RVSEYQK-AGVK 310


>gi|296227440|ref|XP_002759377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 1 [Callithrix jacchus]
          Length = 351

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G    F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKFFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 325 EKRVSEYQRFA 335


>gi|256081213|ref|XP_002576867.1| ribonucleoside-diphosphate reductase small chain [Schistosoma
           mansoni]
 gi|238662153|emb|CAZ33104.1| ribonucleoside-diphosphate reductase small chain, putative
           [Schistosoma mansoni]
          Length = 365

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   +   I  + P       +++  +++ EA L+E  + 
Sbjct: 225 MPGLSFSNELISRDEGLHCDFACLLFKHIIKKPP-------KERVESIIREAVLIEQEFL 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++FIA+R   ++G E ++ +++NPF +M E I ++ + NFF
Sbjct: 278 SEALPVSLIGMNCKLMCQYIEFIADRLLVELGYEKMY-HSDNPFDFM-ENISIEGKTNFF 335

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 336 EKRVGEYQRAG 346


>gi|34482564|emb|CAE09564.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Wolinella
           succinogenes]
          Length = 283

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 73/132 (55%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN +K E P L+TK  +++   M  +A  +E A+ 
Sbjct: 147 MLGSAQMIRFIQRDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWG 206

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +    +Y+Q++A+ R  ++G+ P+    ++P  W+ +     ++K NF
Sbjct: 207 DYITQGQILGLTSEIIHEYIQYLADDRLKRVGM-PILYNAKHPIKWVDQFSSFNEQKTNF 265

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 266 FEGNVTNYAKGS 277


>gi|296271635|ref|YP_003654266.1| ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
 gi|296095810|gb|ADG91760.1| Ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
          Length = 339

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  ++I RDE  HL    ++IN  + E P L+T E + K R M  +A  LE A+ 
Sbjct: 203 MLGSSQMIKFIQRDEVTHLLLFQNMINSTRKERPDLFTPELEVKVRAMFRKAVELEAAWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G       QY+Q++A++R   +G +P +   ++P PW+        ++ NF
Sbjct: 263 AYITQGQILGFTDGIITQYIQYLADKRLDAVGYKPEYN-VKHPIPWVDGYSSFNDQRTNF 321

Query: 120 FETRVTEYQQGA 131
           FE  V  Y +G+
Sbjct: 322 FEGNVVNYSKGS 333


>gi|161760549|ref|NP_906664.2| ribonucleotide-diphosphate reductase subunit beta [Wolinella
           succinogenes DSM 1740]
          Length = 341

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 73/132 (55%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN +K E P L+TK  +++   M  +A  +E A+ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +    +Y+Q++A+ R  ++G+ P+    ++P  W+ +     ++K NF
Sbjct: 265 DYITQGQILGLTSEIIHEYIQYLADDRLKRVGM-PILYNAKHPIKWVDQFSSFNEQKTNF 323

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 324 FEGNVTNYAKGS 335


>gi|315452596|ref|YP_004072866.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
 gi|315131648|emb|CBY82276.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
          Length = 347

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL     +I+ +K E P L++K+  ++   M  EA  LE  + 
Sbjct: 211 MLGSAQMIRFIQRDEVTHLALFQSMIHTLKKERPDLFSKDLVEEILEMFKEAVDLESTWG 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   + LN  +   Y++++A+ R H IGL P   +T++P  W+ +      ++ NF
Sbjct: 271 RVITQGEILDLNPVTLRAYIEYLADTRLHAIGL-PKIYHTKHPMRWVDQFSSFNSQRSNF 329

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 330 FEARVSNYSKGS 341


>gi|289177074|ref|NP_001165948.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Homo
           sapiens]
          Length = 423

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 286 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 338

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 339 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 396

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 397 EKRVSEYQRFA 407


>gi|301166951|emb|CBW26530.1| putative ribonucleoside-diphosphate reductase small chain subunit
           [Bacteriovorax marinus SJ]
          Length = 322

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 13/136 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTM---LHEATLLEI 57
           M G+    ++I RDE LH  F   +          L T E Q    T+   + EA  +E 
Sbjct: 183 MPGLCTSNEFISRDEGLHCEFACHI--------HELLTPEEQLNKETITQIITEAVSIEK 234

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
            +  E +P   +G+NA    +Y++F+A+   +++G E  +  TENPF WM E+I L+ + 
Sbjct: 235 EFITEAIPVSLIGMNADMMSRYIEFVADYWLNRLGCEKAYN-TENPFDWM-ELISLEGKT 292

Query: 118 NFFETRVTEYQQGAGL 133
           NFFE RV+EYQ+   L
Sbjct: 293 NFFEKRVSEYQKPGVL 308


>gi|255551489|ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223543878|gb|EEF45404.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 342

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQ-QKSRTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   + +        L  K+ Q QK + ++HEA  +E  +
Sbjct: 201 MPGLTFSNELISRDEGLHCDFACLLYS--------LLQKQLQWQKVQQIVHEAVEIETEF 252

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             + +P   +G+N+    QY++F+A+R    +G +  +   ENPF WM E I L+ + NF
Sbjct: 253 VCDALPCALIGMNSTLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANF 310

Query: 120 FETRVTEYQQGA 131
           FE RV +YQ+ +
Sbjct: 311 FERRVGDYQKAS 322


>gi|327269406|ref|XP_003219485.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Anolis carolinensis]
          Length = 414

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 277 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 329

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 330 TEALPVGLIGMNCTLMKQYIEFVADRLLLELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 387

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 388 EKRVSEYQRFA 398


>gi|1710401|sp|P49730|RIR2_TOBAC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleoside-diphosphate reductase R2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|1044912|emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum]
          Length = 329

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++       TK  +++ + ++ +A  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------TKLTEERVKGIVADAVEIEREFV 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     +Y++F+A+R    +G + L+   +NPF WM E+I L+ + NFF
Sbjct: 241 CDALPCALVGMNGDLMSKYIEFVADRLLDALGYDKLYN-AQNPFDWM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 299 EKRVGEYQKAS 309


>gi|325181522|emb|CCA15972.1| ribonucleosidediphosphate reductase small chain put [Albugo
           laibachii Nc14]
          Length = 1611

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 74/133 (55%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +++  + P       +     ++ +A ++E  + 
Sbjct: 252 MPGLCFSNELISRDEGLHCDFACLMYSKLVNKLP-------EASIHAIISDAVVIEQEFV 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R  H +G+  L+ +T NPF WM ++I L+ + NFF
Sbjct: 305 RDSLPVELIGMNSSLMGQYIEFVADRLLHALGVSKLY-HTSNPFDWM-DMISLQGKTNFF 362

Query: 121 ETRVTEYQQGAGL 133
           E RV EY +   +
Sbjct: 363 EKRVGEYAKSGTI 375


>gi|241166485|ref|XP_002409876.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
 gi|215494664|gb|EEC04305.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
          Length = 376

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  Q + R ++ +A ++E  + 
Sbjct: 239 MPGLTFSNELISRDEGLHTDFACLMFS-------HLVNKPSQARVRQIICDAVVIEQEFL 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    ++Y++F+A+R   ++G E ++  +ENPF +M E I L+ + NFF
Sbjct: 292 TDALPVALIGMNCELMKRYIEFVADRLLVELGCEKVYN-SENPFDFM-EHISLEGKTNFF 349

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 350 EKRVGEYQKAG 360


>gi|194673004|ref|XP_607398.4| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297482473|ref|XP_002692807.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Bos
           taurus]
 gi|296480530|gb|DAA22645.1| ribonucleotide reductase M2 polypeptide-like [Bos taurus]
          Length = 351

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 325 EKRVSEYQRFA 335


>gi|50949848|emb|CAH10473.1| hypothetical protein [Homo sapiens]
          Length = 297

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 160 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPPEERVREIIVDAVKIEQEFL 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 213 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 270

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 271 EKRVSEYQRFA 281


>gi|300676950|gb|ADK26821.1| ribonucleotide reductase M2 [Zonotrichia albicollis]
          Length = 390

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A L+E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLIHKPSEERVREIIMNAVLIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 364 EKRVGEYQR 372


>gi|291388369|ref|XP_002710634.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Oryctolagus cuniculus]
          Length = 339

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 202 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 254

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 255 TEALPVGLIGMNCILMKQYIEFVADRLLMELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 312

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 313 EKRVSEYQRFA 323


>gi|120437796|ref|YP_863482.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
 gi|117579946|emb|CAL68415.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
          Length = 325

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + + NQ      HL  +  ++K R +L +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGMHCDFAVHLHNQ------HLVNQVPKEKIREILIDALNIEREFV 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++  E  +  + NPF +M ++I+L+ + NFF
Sbjct: 240 TESLPVSLIGMNAKLMTQYLEFVTDRLLVELDCEKEYNVS-NPFDFM-DMINLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV+EYQ+   +  D
Sbjct: 298 EKRVSEYQKAGVMNKD 313


>gi|290995765|ref|XP_002680453.1| predicted protein [Naegleria gruberi]
 gi|284094074|gb|EFC47709.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 74/130 (56%), Gaps = 8/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + + +K      +TK  QQ   ++++EA  +E  + 
Sbjct: 200 MPGLSFSNELISRDEGLHTDFACLLYSTLK------YTKLPQQVVHSLVYEAVEIEKEFI 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+   +QY++ +A+R    IG E ++  + NPF WM+ +I +  + NFF
Sbjct: 254 SESLPVDLIGMNSRLMQQYIEMVADRLLVSIGYEKIYN-SSNPFDWMN-IISVSGKTNFF 311

Query: 121 ETRVTEYQQG 130
           E +V EY + 
Sbjct: 312 EKKVGEYAKA 321


>gi|91215505|ref|ZP_01252476.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
 gi|91186457|gb|EAS72829.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
          Length = 326

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 74/131 (56%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F +       + N HL  +  +++ R ++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGVHCDFAV------HLHNEHLVNQVPKERIRAIIVDALTIEREFV 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+A+R   ++G +  +  T NPF +M ++I L+ + NFF
Sbjct: 240 TESLPVSLIGMNSNLMTQYLEFVADRLLFELGCDKEYG-TANPFDFM-DMISLQGKTNFF 297

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 298 EKRVGEYQKAG 308


>gi|326917964|ref|XP_003205263.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Meleagris gallopavo]
          Length = 353

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       +L  +  +++ R ++  A  +E  + 
Sbjct: 216 MPGLTFSNELISRDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFL 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F + ENPF +M E I L+ + NFF
Sbjct: 269 TEALPVGLIGMNCTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFF 326

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 327 EKRVSEYQRFA 337


>gi|118087248|ref|XP_418364.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 353

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 74/131 (56%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       +L  +  +++ R ++  A  +E  + 
Sbjct: 216 MPGLTFSNELISRDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFL 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F + ENPF +M E I L+ + NFF
Sbjct: 269 TEALPVGLIGMNCTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFF 326

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 327 EKRVSEYQRFA 337


>gi|281200507|gb|EFA74725.1| ribonucleotide reductase small subunit [Polysphondylium pallidum
           PN500]
          Length = 335

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 13/136 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIA 58
           M G+    + I RDE LH +F   +  ++  K++N  +          T++ +A   E  
Sbjct: 189 MHGLTFSNELISRDEGLHCDFACLLYQKLQNKLDNNTI---------ETIIRDAVACEKE 239

Query: 59  YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
           +  E++P   +G+N+ S  QY++F A+R    +G + ++  + NPF WM E+I L+++ N
Sbjct: 240 FITESLPVDLIGMNSRSMSQYIEFCADRLLLSLGYKKIYN-SSNPFDWM-EMISLQRKTN 297

Query: 119 FFETRVTEYQQGAGLK 134
           FFE +V+EYQ+    K
Sbjct: 298 FFEGKVSEYQKSGVAK 313


>gi|237752265|ref|ZP_04582745.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376507|gb|EEO26598.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 343

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E PHL+TK+  ++   M  EA  +E  + 
Sbjct: 207 MLGSAQMIRFIQRDEVTHLLLFQNMINSLRKEMPHLFTKDLIEEVLEMFREAVRVESTWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +    +Y++++A+ R  ++GL  L+    +P  W+       ++K NF
Sbjct: 267 EYITQGQILGLTSEIIHEYIRYLADNRLTRVGLPALYN-ARHPIKWVDSFSSFNEQKTNF 325

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 326 FEGNVTNYAKGS 337


>gi|188588149|ref|YP_001919720.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum E3 str. Alaska E43]
 gi|251778737|ref|ZP_04821657.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|188498430|gb|ACD51566.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E3 str. Alaska E43]
 gi|243083052|gb|EES48942.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 344

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 2/135 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ ENP  +T + + + + M+      EI + 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNIIKELQSENPESFTTDLKNELKEMMRIGVENEILWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-N 118
           H  +     G+N    E Y++++ N+R  +IGL  LF+ + ENP  W+  V +    K +
Sbjct: 266 HYVIGDKIQGINKKLIEDYIKYLGNKRLKEIGLGMLFEGFEENPATWVDVVANSNSVKTD 325

Query: 119 FFETRVTEYQQGAGL 133
           FFE + T Y + + L
Sbjct: 326 FFEAKSTAYAKVSTL 340


>gi|168186576|ref|ZP_02621211.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
 gi|169295422|gb|EDS77555.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
          Length = 342

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K EN  ++T+   ++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEITHLILFQNIIKELKNENLDIFTESIIEEFRMMMKTGVEHEIKWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +G+N    E+Y+++++N R + IGLE L+ + TE+P  W+     L   K +
Sbjct: 262 QYVTNNEILGINNNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|7106399|ref|NP_033130.1| ribonucleoside-diphosphate reductase subunit M2 [Mus musculus]
 gi|132626|sp|P11157|RIR2_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|22218698|pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|22218699|pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|52696260|pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Oxidizing Conditions. A Fully Occupied
           Dinuclear Iron Cluster.
 gi|52696261|pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Reducing Conditions. A Fully Occupied
           Dinuclear Iron Cluster And Bound Acetate.
 gi|157834262|pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse
 gi|50720|emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus]
 gi|200768|gb|AAA40062.1| ribonucleotide reductase subunit M2 [Mus musculus]
 gi|26354034|dbj|BAC40647.1| unnamed protein product [Mus musculus]
 gi|54887418|gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus]
 gi|74139292|dbj|BAE40793.1| unnamed protein product [Mus musculus]
 gi|74151119|dbj|BAE27683.1| unnamed protein product [Mus musculus]
 gi|74179887|dbj|BAE36508.1| unnamed protein product [Mus musculus]
 gi|74188932|dbj|BAE39238.1| unnamed protein product [Mus musculus]
 gi|74189151|dbj|BAE39331.1| unnamed protein product [Mus musculus]
 gi|74206394|dbj|BAE24918.1| unnamed protein product [Mus musculus]
 gi|74211991|dbj|BAE40165.1| unnamed protein product [Mus musculus]
          Length = 390

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ R ++  A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 364 EKRVGEYQR 372


>gi|118089007|ref|XP_419948.2| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 2 [Gallus gallus]
          Length = 384

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ + ++  A L+E  + 
Sbjct: 247 MPGLTFSNELISRDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFL 299

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 300 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFF 357

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 358 EKRVGEYQR 366


>gi|74207686|dbj|BAE40088.1| unnamed protein product [Mus musculus]
          Length = 390

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ R ++  A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 364 EKRVGEYQR 372


>gi|148705043|gb|EDL36990.1| ribonucleotide reductase M2 [Mus musculus]
          Length = 411

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ R ++  A  +E  + 
Sbjct: 274 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFL 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 327 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFF 384

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 385 EKRVGEYQR 393


>gi|241668401|ref|ZP_04755979.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876934|ref|ZP_05249644.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254842955|gb|EET21369.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
          Length = 410

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 4/139 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   +F+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFI 327

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + GL A   ++Y++ I +RR +Q+GL  ++   +NP  W+  +++     NF
Sbjct: 328 DLAYEIGTIEGLKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGAGL--KWD 136
           FE RVTEY+  AGL   WD
Sbjct: 388 FENRVTEYEV-AGLTGNWD 405


>gi|167627842|ref|YP_001678342.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597843|gb|ABZ87841.1| Ribonucleoside-diphosphate reductase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 410

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 4/139 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   +F+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFI 327

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + GL A   ++Y++ I +RR +Q+GL  ++   +NP  W+  +++     NF
Sbjct: 328 DLAYEIGTIEGLKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGAGL--KWD 136
           FE RVTEY+  AGL   WD
Sbjct: 388 FENRVTEYEV-AGLTGNWD 405


>gi|118089009|ref|XP_001231545.1| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 1 [Gallus gallus]
          Length = 392

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ + ++  A L+E  + 
Sbjct: 255 MPGLTFSNELISRDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFL 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 308 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFF 365

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 366 EKRVGEYQR 374


>gi|194036959|ref|XP_001925036.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Sus
           scrofa]
          Length = 351

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  + + R ++  A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEARVREIIVNAVEIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 325 EKRVSEYQRFA 335


>gi|326916502|ref|XP_003204546.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Meleagris gallopavo]
          Length = 339

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ + ++  A L+E  + 
Sbjct: 202 MPGLTFSNELISRDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFL 254

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 255 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFF 312

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 313 EKRVGEYQR 321


>gi|302409182|ref|XP_003002425.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
 gi|261358458|gb|EEY20886.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
          Length = 414

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  + 
Sbjct: 264 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQTVQDIVTDAVNIEQEFL 316

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+NA   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFF
Sbjct: 317 TEALPCGLLGMNATLMKQYIEFVADRLLVALGNEKVYKAT-NPFDFM-ENISLGGKTNFF 374

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 375 EKRVADYQKAG 385


>gi|223039245|ref|ZP_03609535.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
 gi|222879606|gb|EEF14697.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
          Length = 340

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T E + K   M   A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRTERPDLFTSEMEAKIYDMFKRAGELEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      EQY++++ ++R   IGL+  +    +P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEQYIRYLIDQRLVAIGLKRRYD-ARHPIKWVDDFAKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE +VT Y +G+
Sbjct: 323 FEAKVTNYSKGS 334


>gi|225850104|ref|YP_002730338.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
 gi|225645787|gb|ACO03973.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
          Length = 329

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 3/129 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKE-FQQKSRTMLHEATLLEIAY 59
           M  +    + I+ DESLHL  GI+ I  I  ENP +   E F +  +  + +A  LE+ Y
Sbjct: 199 MKNVVSGVELILIDESLHLQNGIEAILTIVEENPEIVDDEKFVENIKETIIDAVELELNY 258

Query: 60  AHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                    + G++    E+YM++IA+RR  ++G +P FK  +NP  ++ +  D+KK  N
Sbjct: 259 LKTKFGGTTIFGVSYKELEKYMKYIADRRLEELGFDPQFKIDQNPLKFLQKE-DVKKLTN 317

Query: 119 FFETRVTEY 127
           FFE   TEY
Sbjct: 318 FFEVSSTEY 326


>gi|281340156|gb|EFB15740.1| hypothetical protein PANDA_011632 [Ailuropoda melanoleuca]
          Length = 336

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 199 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 252 TEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 309

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ A
Sbjct: 310 EKRVAEYQRFA 320


>gi|45360749|ref|NP_989048.1| ribonucleotide reductase M2, gene 1 [Xenopus (Silurana) tropicalis]
 gi|38174078|gb|AAH61353.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 378

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  + 
Sbjct: 241 MPGLTFSNELISRDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFL 293

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFF
Sbjct: 294 TEALPVELIGMNCKLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFF 351

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 352 EKKVAEYQK 360


>gi|325261084|ref|ZP_08127822.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
 gi|324032538|gb|EGB93815.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
          Length = 347

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     ++ ++K E P L+T E  +K R+M+ E    EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRSILMELKKEEPWLFTAEKTEKYRSMIREGCEQEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
           H  +     GLN      Y+Q++ N RC  + LEP+++  E       W+S+  +    K
Sbjct: 267 HYVIGDDIQGLNREMITDYIQYLGNLRCRGLELEPVYEGHEKEPESMSWVSQFSNANMIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y + + L
Sbjct: 327 TDFFEARSTAYAKSSAL 343


>gi|310831442|ref|YP_003970085.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
 gi|309386626|gb|ADO67486.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
          Length = 326

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++ I + + ++        K  Q+K + M  +A   E  + 
Sbjct: 189 MPGLISSNELIARDEGMHCDYSIMLYHMLQ-------NKLSQEKIQQMFKDAVETERIFI 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA   EQY++F+A++   ++G   +FK  +NPF WM E I ++ + NFF
Sbjct: 242 CESLPCSLLGMNADLMEQYIKFVADQLIIKLGYNKIFK-VDNPFTWM-EAISIEGKTNFF 299

Query: 121 ETRVTEYQQG 130
           E R T+YQ+ 
Sbjct: 300 EHRPTQYQRA 309


>gi|9634266|ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
 gi|6960505|gb|AAF33575.1|AF169823_45 ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
          Length = 313

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 15/136 (11%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN---QIKIENPHLWTKEFQQKSRTMLHEATLLEI 57
           M G+    + I RDE LH NF     N     K++ P +           M  EA  +E+
Sbjct: 179 MPGLTFSNELISRDEGLHTNFACLYYNTRVDQKLDAPTV---------NDMFSEAVAIEM 229

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
            +  E +P+  VG+NA    +Y++F+A+R   Q+   P   YTENPF +M+  I L+ + 
Sbjct: 230 EFFAEALPESLVGMNANMMRKYIEFVADRLLVQLKY-PKMYYTENPFEFMNN-ISLEGKT 287

Query: 118 NFFETRVTEYQQ-GAG 132
           NFFE RV EY++ GAG
Sbjct: 288 NFFEKRVGEYKRFGAG 303


>gi|301774462|ref|XP_002922647.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Ailuropoda melanoleuca]
          Length = 387

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 250 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 303 TEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 360

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ A
Sbjct: 361 EKRVAEYQRFA 371


>gi|73974198|ref|XP_539109.2| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 2 [Canis familiaris]
          Length = 351

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ A
Sbjct: 325 EKRVAEYQRFA 335


>gi|291276761|ref|YP_003516533.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           mustelae 12198]
 gi|290963955|emb|CBG39794.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           mustelae 12198]
          Length = 344

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  ++I RDE  HL    ++I  +K E P L+ K+ +++   M   A  +E A+ 
Sbjct: 209 MLGSSQMIRFIQRDEVTHLILFQNMIRTLKKERPDLFDKDLEEEIVEMFRRAVEIEAAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL      QY+Q++A++R  ++G+  L+   E+P  W+ +     +++ NF
Sbjct: 269 EYITQGQILGLTGEVIHQYIQYLADQRLSKVGMPKLYN-VEHPIKWVEQYASFNEQRTNF 327

Query: 120 FETRVTEYQQGA 131
           FE +VT Y +G+
Sbjct: 328 FEAKVTNYAKGS 339


>gi|293343290|ref|XP_002725449.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Rattus
           norvegicus]
 gi|293355176|ref|XP_002728627.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Rattus
           norvegicus]
          Length = 390

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNAVRIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 364 EKRVGEYQR 372


>gi|301772278|ref|XP_002921557.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Ailuropoda melanoleuca]
          Length = 393

 Score = 74.3 bits (181), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ R ++  A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVREIIINAVRIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 309 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 366

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 367 EKRVGEYQR 375


>gi|331086748|ref|ZP_08335825.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
 gi|330409914|gb|EGG89349.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
          Length = 347

 Score = 74.3 bits (181), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 74/137 (54%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ +++ E P L+++E +++ R M+ E    EIA+ 
Sbjct: 207 MTGSVQEIRYINRDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
           H  +     GL+      Y++++ N RC  +GL P+++  E       W+S+  +    K
Sbjct: 267 HYVIGDAVSGLSCDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y + + L
Sbjct: 327 TDFFEAKSTAYAKSSAL 343


>gi|149637725|ref|XP_001508783.1| PREDICTED: similar to Ribonucleotide reductase M2 B (TP53
           inducible) [Ornithorhynchus anatinus]
          Length = 401

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 76/131 (58%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   ++ Q  ++ P       + K + ++ +A  +E  + 
Sbjct: 264 MPGLTFSNELISRDEGLHCDFAC-LMFQYLVKKPS------EDKVKEIIIDAVEIEQEFL 316

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F +++NPF +M E I L+ + NFF
Sbjct: 317 TEALPVGLIGMNCTLMKQYIEFVADRLLVELGFSKVF-HSDNPFDFM-ENISLEGKTNFF 374

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 375 EKRVSEYQRFA 385


>gi|330998673|ref|ZP_08322403.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
 gi|329576534|gb|EGG58042.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
          Length = 327

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLL 55
           M G+ +   + + DE+LH    I +  +  IENP LWT   +++    +  M+  E   +
Sbjct: 180 MKGMGQIIAWSINDETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFI 239

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+    M K    L+    + Y+++I +RR   +G++ +FK   NP PW+  ++ +  
Sbjct: 240 DLAFGVNDMSKQ--NLSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSMLGV-T 296

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE RV +Y +GA
Sbjct: 297 HTNFFENRVVDYAKGA 312


>gi|303258316|ref|ZP_07344319.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
 gi|302858762|gb|EFL81850.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
          Length = 328

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLH-EATLL 55
           M G+ +   + + DE+LH    I +  +  IENP LWT   +++    +  M+  E   +
Sbjct: 181 MKGMGQIIAWSINDETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFI 240

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+    M K    L+    + Y+++I +RR   +G++ +FK   NP PW+  ++ +  
Sbjct: 241 DLAFGVNDMSKQ--NLSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSMLGV-T 297

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE RV +Y +GA
Sbjct: 298 HTNFFENRVVDYAKGA 313


>gi|325663145|ref|ZP_08151595.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
 gi|325470599|gb|EGC73829.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
          Length = 347

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 74/137 (54%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ +++ E P L+++E +++ R M+ E    EIA+ 
Sbjct: 207 MTGSVQEIRYINRDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
           H  +     GL+      Y++++ N RC  +GL P+++  E       W+S+  +    K
Sbjct: 267 HYVIGDAVSGLSCDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y + + L
Sbjct: 327 TDFFEAKSTAYAKSSAL 343


>gi|224048725|ref|XP_002196356.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Taeniopygia
           guttata]
          Length = 390

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ + ++  A L+E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLIHKPSEERVKEIIMNAVLIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 364 EKRVGEYQR 372


>gi|148232385|ref|NP_001085389.1| ribonucleotide reductase M2, gene 1 [Xenopus laevis]
 gi|48735122|gb|AAH72071.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  + 
Sbjct: 269 MPGLTFSNELISRDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFL 321

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFF
Sbjct: 322 TEALPVELIGMNCTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFF 379

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 380 EKKVGEYQK 388


>gi|315635423|ref|ZP_07890689.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
 gi|315480181|gb|EFU70848.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
          Length = 339

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  ++I RDE  HL    ++IN ++ E P L+T+E ++  R M  +A  LE ++ 
Sbjct: 203 MLGSSQMIRFIQRDEVTHLLLFQNMINSVRKERPDLFTQELEETVRAMFRKAVDLEASWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G       QY++++A+RR   +G +  +   ++P PW+        ++ NF
Sbjct: 263 AYITQGQILGFTDGIIRQYIEYLADRRLEAVGYKAEYG-VKHPIPWVDGYASFNDQRTNF 321

Query: 120 FETRVTEYQQGA 131
           FE  V  Y +G+
Sbjct: 322 FEGNVVNYSKGS 333


>gi|327261311|ref|XP_003215474.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 2 [Anolis carolinensis]
          Length = 390

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVNLIGMNCTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 364 EKRVGEYQR 372


>gi|194474072|ref|NP_001124015.1| ribonucleoside-diphosphate reductase subunit M2 B [Rattus
           norvegicus]
 gi|149066498|gb|EDM16371.1| ribonucleotide reductase M2 B (TP53 inducible) (predicted) [Rattus
           norvegicus]
          Length = 351

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++   ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVMEIIVDAVKIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 325 EKRVSEYQRFA 335


>gi|6525234|gb|AAF15363.1|AF205376_1 ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 320

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 73/129 (56%), Gaps = 9/129 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + +  + P       +Q  + ++ EA  +E ++  E
Sbjct: 185 GLTFSNELISRDEGLHTDFNCLIYSLLDNKLP-------EQMVQNIVKEAVEVERSFICE 237

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE 
Sbjct: 238 SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEK 295

Query: 123 RVTEYQQGA 131
           RV +YQ+  
Sbjct: 296 RVADYQKSG 304


>gi|327261309|ref|XP_003215473.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 1 [Anolis carolinensis]
          Length = 394

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 310 TEALPVNLIGMNCTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFF 367

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 368 EKRVGEYQR 376


>gi|242095388|ref|XP_002438184.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
 gi|241916407|gb|EER89551.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
          Length = 339

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   ++       +K  + + R ++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYELLR-------SKLDEARVREIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++  T NPF WM E+I L+ + NFF
Sbjct: 250 CDALPVALVGMNGGLMSQYIEFVADRLLMALGCKKMYNAT-NPFDWM-ELISLQGKTNFF 307

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 308 EKRVGDYQKAS 318


>gi|76630263|ref|XP_880783.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 3 [Bos
           taurus]
 gi|297480612|ref|XP_002691528.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 2 [Bos
           taurus]
 gi|296482362|gb|DAA24477.1| ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus]
          Length = 341

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 204 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFL 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 257 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 314

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 315 EKRVGEYQR 323


>gi|2500209|sp|Q60561|RIR2_MESAU RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|49650|emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus]
          Length = 386

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVQEIITNAVRIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 364 EKRVGEYQR 372


>gi|260909050|gb|ACX54162.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909052|gb|ACX54163.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909054|gb|ACX54164.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909056|gb|ACX54165.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 349

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 8/128 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    ++I RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   
Sbjct: 225 GLTSSNEFISRDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTV 278

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   VG+N     QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE 
Sbjct: 279 SLPVKLVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEK 336

Query: 123 RVTEYQQG 130
           RV EYQ+ 
Sbjct: 337 RVAEYQRA 344


>gi|296421312|ref|XP_002840209.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636423|emb|CAZ84400.1| unnamed protein product [Tuber melanosporum]
          Length = 397

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + N       HL  +  QQ  + ++ EA  +E  + 
Sbjct: 250 MPGLSFSNELISRDEGLHTDFACLLFN-------HLNNRPSQQAVQDIIVEAVGIEQEFL 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G  P F    NPF +M E I L  + NFF
Sbjct: 303 TEALPCALLGMNSKLMKQYIEFVADRLLLSLG-NPKFYNATNPFDFM-ESISLAGKTNFF 360

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 361 EKRVGDYQKAG 371


>gi|327261313|ref|XP_003215475.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 3 [Anolis carolinensis]
          Length = 391

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 254 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 307 TEALPVNLIGMNCTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFF 364

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 365 EKRVGEYQR 373


>gi|124808087|ref|XP_001348226.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
 gi|23497116|gb|AAN36665.1|AE014816_50 ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
          Length = 349

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 73/129 (56%), Gaps = 9/129 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + +  + P       +Q  + ++ EA  +E ++  E
Sbjct: 214 GLTFSNELISRDEGLHTDFNCLIYSLLDNKLP-------EQMVQNIVKEAVEVERSFICE 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE 
Sbjct: 267 SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEK 324

Query: 123 RVTEYQQGA 131
           RV +YQ+  
Sbjct: 325 RVADYQKSG 333


>gi|88682973|gb|AAI05512.1| RRM2 protein [Bos taurus]
          Length = 338

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 201 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFL 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 254 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 311

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 312 EKRVGEYQR 320


>gi|157736292|ref|YP_001488975.1| ribonucleotide-diphosphate reductase subunit beta [Arcobacter
           butzleri RM4018]
 gi|157698146|gb|ABV66306.1| ribonucleoside-diphosphate reductase, beta chain [Arcobacter
           butzleri RM4018]
          Length = 339

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  ++I RDE  HL    ++IN ++ E P L+T E ++  R M  +A  LE ++ 
Sbjct: 203 MLGSSQMIRFIQRDEVTHLLLFQNMINSVRKERPDLFTSELEETVRAMFRKAVDLEASWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G       QY++++A+RR   +G +  +   ++P PW+        ++ NF
Sbjct: 263 AYITQGQILGFTDGIIRQYIEYLADRRLEAVGYKAEYG-VKHPIPWVDGYASFNDQRTNF 321

Query: 120 FETRVTEYQQGA 131
           FE  V  Y +G+
Sbjct: 322 FEGNVVNYSKGS 333


>gi|210616053|ref|ZP_03290925.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
 gi|210149961|gb|EEA80970.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
          Length = 355

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ ++K E P L+T+++  + R+M+ E    EI + 
Sbjct: 215 MPGSVQEIRYINRDENTHLWLFRNILIELKKEQPDLFTEQYIDEYRSMIKEGCEQEIKWG 274

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
           H  +     GLN      Y+Q++ N RC  +G  P+++  E       W+S+  +    K
Sbjct: 275 HYVIGDDVQGLNREMITDYVQYLGNLRCTNLGFAPIYEGHETEPESMRWVSQYSNANAIK 334

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y + + L
Sbjct: 335 TDFFEARSTAYAKSSAL 351


>gi|294950175|ref|XP_002786498.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239900790|gb|EER18294.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N +K      +T+   ++   ++  A  +E  + 
Sbjct: 196 MPGLTFSNELISRDEGLHADFACLLYNMLK------YTRLPDERVHEIVRGAVEVERVFI 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    +Y++F+A+R    +G   L+  T NPF WM ++I L+ + NFF
Sbjct: 250 SESLPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWM-KMISLQGKTNFF 307

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+G 
Sbjct: 308 EKRVGEYQKGG 318


>gi|313675915|ref|YP_004053911.1| ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
 gi|312942613|gb|ADR21803.1| Ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
          Length = 331

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + N HL  K  ++K   ++ +A  +E  + 
Sbjct: 190 MPGLTFSNELISRDEGLHCDFAC------LLYNDHLVNKLSKEKVTAIITDAVEIEKEFV 243

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+NA    QY++F+A+R   ++  + ++  + NPF +M E+I L+ + NFF
Sbjct: 244 TDSLPVKLIGMNADLMCQYIEFVADRLLQELRCDKVYG-SSNPFDFM-EMISLQGKTNFF 301

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   +K
Sbjct: 302 EKRVGDYQKAGVMK 315


>gi|297805560|ref|XP_002870664.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316500|gb|EFH46923.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 333

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++       TK  +++ ++++ +A  +E  + 
Sbjct: 189 MPGLTFSNELISRDEGLHCDFACLIYSLLR-------TKLDEERLKSIVCDAVEIEREFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFF
Sbjct: 242 CDALPCALVGMNRELMSQYIEFVADRLLTALGCGKVYGVS-NPFDWM-ELISLQGKTNFF 299

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 300 EKRVGEYQKAS 310


>gi|20809684|gb|AAH28932.1| Similar to ribonucleotide reductase protein r2 class I [Homo
           sapiens]
          Length = 172

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 35  MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 87

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 88  TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 145

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 146 EKRVGEYQR 154


>gi|7672989|gb|AAF66689.1|AF144620_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
          Length = 413

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 8/128 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    ++I RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   
Sbjct: 240 GLTSSNEFISRDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTV 293

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   VG+N     QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE 
Sbjct: 294 SLPVKLVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEK 351

Query: 123 RVTEYQQG 130
           RV EYQ+ 
Sbjct: 352 RVAEYQRA 359


>gi|77748199|gb|AAI06683.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  + 
Sbjct: 269 MPGLTFSNELISRDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFL 321

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFF
Sbjct: 322 IEALPVELIGMNCTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFF 379

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 380 EKKVGEYQK 388


>gi|17158292|ref|NP_477710.1| wsv188 [Shrimp white spot syndrome virus]
 gi|14189948|gb|AAK55515.1|AF267731_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
 gi|15021490|gb|AAK77767.1|AF369029_98 ORF98, putative ribonucleotide reductase small subunit (RR2)
           [shrimp white spot syndrome virus]
 gi|17016586|gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus]
 gi|19481835|gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus]
          Length = 413

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 8/128 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    ++I RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   
Sbjct: 240 GLTSSNEFISRDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTV 293

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   VG+N     QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE 
Sbjct: 294 SLPVKLVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEK 351

Query: 123 RVTEYQQG 130
           RV EYQ+ 
Sbjct: 352 RVAEYQRA 359


>gi|227501022|ref|ZP_03931071.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
 gi|227216795|gb|EEI82193.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
          Length = 352

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +IN +K E   L+  E Q   R ML E    EIA+ 
Sbjct: 212 MPGTVQEIRYINRDENTHLWLFRSLINDLKKEREDLFVPELQNYYRNMLKEGVEQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GLN    E Y++++ N R   +GLE L++ + E P    W+ E  D    K
Sbjct: 272 KYAIGNEIAGLNEKMIEDYIKYLGNLRAKGLGLEALYEGFDEIPESMKWVDEYSDPNGVK 331

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE +VT Y + + ++ D
Sbjct: 332 TDFFEAKVTAYSKSSIIEDD 351


>gi|58260834|ref|XP_567827.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134117207|ref|XP_772830.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255448|gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229908|gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 430

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + N +K       T E       ++ EA ++E  + 
Sbjct: 282 MPGLTFSNELISRDEGMHTDFACLLYNHLK---HRCSTDEVHH----IVSEALVIEKQFL 334

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QYM+F+A+R    +G   ++  T NPF WM E+I L+ + NFF
Sbjct: 335 TDALPCALIGINAHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFF 392

Query: 121 ETRVTEYQQG 130
           E+RV+ YQ+ 
Sbjct: 393 ESRVSAYQKA 402


>gi|76630259|ref|XP_584910.2| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297480610|ref|XP_002691527.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|296482361|gb|DAA24476.1| ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus]
          Length = 389

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 252 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFL 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 362

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 363 EKRVGEYQR 371


>gi|225010999|ref|ZP_03701465.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
 gi|225004906|gb|EEG42862.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
          Length = 328

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++ +       + N HL  K  + + R +L +A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGMHCDYAV------HLHNHHLINKVPKARIREILVDALNIERTFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++  E  +  + NPF +M ++I L+ + NFF
Sbjct: 241 TESLPASLIGMNAKLMTQYLEFVTDRLLVELQCEKEYNVS-NPFDFM-DMISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV+EYQ+   L  D
Sbjct: 299 EKRVSEYQKAGVLNKD 314


>gi|156847978|ref|XP_001646872.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117553|gb|EDO19014.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 400

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   + + IK + +P +  K        ++ EA  +E  Y
Sbjct: 258 MPGLTFSNELICRDEGLHTDFACLLFSHIKNKPDPAIVEK--------IVTEAVEIEKRY 309

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             + +P   +G+NA    QY++F+A+R     G E +FK  ENPF +M E I L  + NF
Sbjct: 310 FTDALPVALLGMNADLMNQYVEFVADRLLVAFGNEKVFK-VENPFDFM-ENISLAGKTNF 367

Query: 120 FETRVTEYQQGA 131
           FE RV++YQ+ +
Sbjct: 368 FEKRVSDYQKAS 379


>gi|326386063|ref|ZP_08207687.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209288|gb|EGD60081.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 351

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 73/132 (55%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH   GI  + Q  ++     TK  ++       +   LE A+ 
Sbjct: 178 MKGMGQIVSWSVRDETLHCE-GITRLFQAFVQERDCMTKAVREDIIDCCQKTVRLEDAFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                +G V G++A   ++Y+++IA+ R  Q+G +P++   E+P PW++ +++  +  NF
Sbjct: 237 DLAFEQGPVPGMSAKEIKRYIRYIADWRLGQLGFQPIYMIEEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGA 131
           FETR TEY + A
Sbjct: 297 FETRATEYSKAA 308


>gi|198420293|ref|XP_002130242.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Ciona
           intestinalis]
          Length = 393

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  + +   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSEARVVEIVKDAVTIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    +QY++F+A+R   ++G   +FK  ENPF +M E+I L+ + NFF
Sbjct: 309 TDALPVALIGMNNKLMKQYIEFVADRLLVELGCSKVFK-VENPFDFM-ELISLEGKTNFF 366

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 367 EKRVGEYQKAG 377


>gi|126322530|ref|XP_001380256.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 361

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 76/131 (58%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       +L  K  +++ + ++  A  +E  + 
Sbjct: 224 MPGLTFSNELISRDEGLHCDFACLMFH-------YLVNKPSEERVKEIIINAVEIEQEFL 276

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P G +G+N+   +QY++F+A+R   ++G   +F+ ++NPF +M E I L+ + NFF
Sbjct: 277 TDALPVGLIGINSTLMKQYIEFVADRLLVELGFSKVFQ-SDNPFDFM-ENISLEGKTNFF 334

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 335 EKRVSEYQRFA 345


>gi|187778605|ref|ZP_02995078.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
 gi|187772230|gb|EDU36032.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
          Length = 342

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 76/138 (55%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K ENP+++T+E +++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIKELKSENPNIFTEELEEEFREMMRMGVEHEIKWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +GLN    ++Y+++++N R   IGL+PL+ +  ++P  W+     L   K +
Sbjct: 262 QYVTNNEILGLNDELIDKYIKYLSNLRLTAIGLKPLYPEINKHPMEWIDSFSKLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAVFDFD 339


>gi|266623614|ref|ZP_06116549.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
 gi|288864591|gb|EFC96889.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
          Length = 346

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +     R M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNMILELKNEEPELFTPDRVDVYREMIKEGCRQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
           H  +     GL       Y+Q++ N RC  +G EP+++  E       W+S+  +    K
Sbjct: 267 HYAIGDKVPGLTKDMITDYIQYLGNLRCMSLGFEPIYEGHEKEPESMAWVSQYSNANMIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y + + L
Sbjct: 327 TDFFEARSTAYAKSSAL 343


>gi|75224904|sp|Q6Y657|RIR2B_ARATH RecName: Full=Putative ribonucleoside-diphosphate reductase small
           chain B; AltName: Full=Ribonucleoside-diphosphate
           reductase R2B subunit; AltName: Full=Ribonucleotide
           reductase small subunit B
 gi|37729626|gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana]
          Length = 333

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++       TK  + + + ++ +A  +E  + 
Sbjct: 189 MPGLTFSNELISRDEGLHCDFACLIYSLLR-------TKLDEDRLKAIVCDAVEIEREFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFF
Sbjct: 242 CDALPCALVGMNRELMSQYIEFVADRLLAALGCAKVYGVS-NPFDWM-ELISLQGKTNFF 299

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 300 EKRVGEYQKAS 310


>gi|313115920|ref|ZP_07801347.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310621684|gb|EFQ05212.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 347

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK 117
           H  +     GLN      Y++++ N R   +G   L P F+       W+S+  D    K
Sbjct: 267 HYVIGDDIPGLNRQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y +   L
Sbjct: 327 TDFFEARSTAYAKSTAL 343


>gi|71043760|ref|NP_001020911.1| ribonucleoside-diphosphate reductase subunit M2 [Rattus norvegicus]
 gi|77416595|sp|Q4KLN6|RIR2_RAT RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|68533806|gb|AAH99082.1| Ribonucleotide reductase M2 [Rattus norvegicus]
 gi|149051013|gb|EDM03186.1| rCG61374 [Rattus norvegicus]
          Length = 390

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  +  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNSVRIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 364 EKRVGEYQR 372


>gi|295103295|emb|CBL00839.1| Ribonucleotide reductase, beta subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 347

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK 117
           H  +     GLN      Y++++ N R   +G   L P F+       W+S+  D    K
Sbjct: 267 HYVIGDDIPGLNRQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y +   L
Sbjct: 327 TDFFEARSTAYAKSTAL 343


>gi|160942848|ref|ZP_02090088.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445900|gb|EDP22903.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
          Length = 347

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK 117
           H  +     GLN      Y++++ N R   +G   L P F+       W+S+  D    K
Sbjct: 267 HYVIGDDIPGLNRQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y +   L
Sbjct: 327 TDFFEARSTAYAKSTAL 343


>gi|242076364|ref|XP_002448118.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
 gi|241939301|gb|EES12446.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
          Length = 339

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  + + R ++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYDLLR-------GKLDESRVREIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFF
Sbjct: 250 CDALPVALVGMNGALMSQYIEFVADRLLMALGHKKMYN-VANPFDWM-ELISLQGKTNFF 307

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 308 EKRVGEYQKAS 318


>gi|227541|prf||1706181A ribonucleotide reductase
          Length = 290

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 153 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 205

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 206 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 263

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 264 EKRVGEYQR 272


>gi|224055741|ref|XP_002298630.1| predicted protein [Populus trichocarpa]
 gi|222845888|gb|EEE83435.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ EA  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKEAVDIEREFV 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 241 VDSLPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 299 EKRVGEYQKAS 309


>gi|255536887|ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223549409|gb|EEF50897.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 329

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        K  +++ + ++ +A  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACLIYSLLK-------KKLSEERVKGIVRDAVNIEREFV 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G    +  + NPF WM E+I L+ + NFF
Sbjct: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGCGKEYNVS-NPFDWM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ A
Sbjct: 299 EKRVGEYQKAA 309


>gi|89890041|ref|ZP_01201552.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
 gi|89518314|gb|EAS20970.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
          Length = 330

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 73/131 (55%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F +       + N HL  K  +++   ++ +A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGMHCDFAV------HLHNHHLVNKVPKERITEIIVDALNIEREFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++  +P++  T NPF +M ++I ++ + NFF
Sbjct: 241 TESLPASLIGMNAKLMTQYLEFVTDRLLGELECDPVYNVT-NPFDFM-DLIGMEGKTNFF 298

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 299 EKRVGEYQKAG 309


>gi|193784694|dbj|BAG53847.1| unnamed protein product [Homo sapiens]
 gi|193787382|dbj|BAG52588.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 160 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 213 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 270

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 271 EKRVGEYQR 279


>gi|125554800|gb|EAZ00406.1| hypothetical protein OsI_22421 [Oryza sativa Indica Group]
          Length = 244

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  + + R ++ +A  +E  + 
Sbjct: 102 MPGLTFSNELISRDEGLHCDFACLLYDLLR-------GKLDEARVREIVADAVDIEREFV 154

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFF
Sbjct: 155 CDALPVALVGMNGDLMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFF 212

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 213 EKRVGDYQKAS 223


>gi|320536436|ref|ZP_08036471.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
 gi|320146705|gb|EFW38286.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
          Length = 363

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T E  +  R M+ E    EI + 
Sbjct: 223 MPGSVQEIRYINRDENTHLWLFRSIIQELQKEEPQLFTPENIEMFRAMIKEGCEQEIKWG 282

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
           H  +     GLN      Y+Q++ N RC  +G EPL++ + E P    W+S+  +    K
Sbjct: 283 HYVIGDDIPGLNKQMITDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIK 342

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y + + +
Sbjct: 343 TDFFEAKSTAYAKSSAM 359


>gi|1710398|sp|P50650|RIR2_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|555613|gb|AAA50170.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
          Length = 349

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 73/129 (56%), Gaps = 9/129 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + +  + P       +Q  + ++ EA  +E ++  E
Sbjct: 214 GLTFSNELISRDEGLHTDFNCLIYSLLDNKLP-------EQIIQNIVKEAVEVERSFICE 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE 
Sbjct: 267 SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFFEK 324

Query: 123 RVTEYQQGA 131
           RV +YQ+  
Sbjct: 325 RVADYQKSG 333


>gi|145580571|pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
           Subunit R2
          Length = 332

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 195 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 247

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 248 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 305

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 306 EKRVGEYQR 314


>gi|4557845|ref|NP_001025.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Homo
           sapiens]
 gi|400979|sp|P31350|RIR2_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|36155|emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens]
 gi|251637|gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens]
 gi|12804875|gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|14029165|gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens]
 gi|20988810|gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|62702173|gb|AAX93099.1| unknown [Homo sapiens]
 gi|123981920|gb|ABM82789.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|123996753|gb|ABM85978.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|189053955|dbj|BAG36462.1| unnamed protein product [Homo sapiens]
 gi|261861600|dbj|BAI47322.1| ribonucleotide reductase M2 [synthetic construct]
          Length = 389

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 252 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 362

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 363 EKRVGEYQR 371


>gi|149728153|ref|XP_001502384.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Equus caballus]
          Length = 425

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 288 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFL 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 341 TEALPVRLIGMNCALMKQYIEFVADRLLLELGFNKVFR-VENPFDFM-ENISLEGKTNFF 398

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 399 EKRVGEYQR 407


>gi|321263951|ref|XP_003196693.1| ribonucleotide reductase small subunit [Cryptococcus gattii WM276]
 gi|317463170|gb|ADV24906.1| Ribonucleotide reductase small subunit, putative [Cryptococcus
           gattii WM276]
          Length = 430

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + N       HL  +    +   ++ EA ++E  + 
Sbjct: 282 MPGLTFSNELISRDEGMHTDFACLLYN-------HLKHRCSTDEVHRIVSEALVIEKQFL 334

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QYM+F+A+R    +G   ++  T NPF WM E+I L+ + NFF
Sbjct: 335 TDALPCALIGINAHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFF 392

Query: 121 ETRVTEYQQG 130
           E+RV+ YQ+ 
Sbjct: 393 ESRVSAYQKA 402


>gi|73979721|ref|XP_540076.2| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
           (Ribonucleotide reductase small chain) isoform 1 [Canis
           familiaris]
          Length = 394

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 310 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 367

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 368 EKRVGEYQR 376


>gi|297668213|ref|XP_002812343.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Pongo abelii]
          Length = 449

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 312 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 364

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 422

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 423 EKRVGEYQR 431


>gi|260064013|ref|NP_001159403.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Homo
           sapiens]
          Length = 449

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 312 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 364

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 422

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 423 EKRVGEYQR 431


>gi|119621373|gb|EAX00968.1| hCG23833, isoform CRA_b [Homo sapiens]
 gi|119621374|gb|EAX00969.1| hCG23833, isoform CRA_b [Homo sapiens]
          Length = 449

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 312 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 364

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 422

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 423 EKRVGEYQR 431


>gi|70936723|ref|XP_739266.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
           chabaudi]
 gi|56516136|emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium
           chabaudi chabaudi]
          Length = 349

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 74/129 (57%), Gaps = 9/129 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E
Sbjct: 214 GLTFSNELISRDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICE 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE 
Sbjct: 267 SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWM-DLISLQGKTNFFEK 324

Query: 123 RVTEYQQGA 131
           RV +YQ+  
Sbjct: 325 RVADYQKSG 333


>gi|226528734|ref|NP_001150842.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|195642302|gb|ACG40619.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   ++        K  + + R ++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYELLR-------NKLDEARVREIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++  T NPF WM E+I L  + NFF
Sbjct: 250 CDALPVALVGMNGDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLMGKTNFF 307

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 308 EKRVGDYQKAS 318


>gi|212697417|ref|ZP_03305545.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325846383|ref|ZP_08169352.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|212675609|gb|EEB35216.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325481567|gb|EGC84607.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 352

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +IN +K E P L+T E ++   ++L E    EIA+ 
Sbjct: 212 MPGTVQEIRYINRDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GLN+   E Y++++ N R   +GL  +++ Y E P    W+SE  D  + K
Sbjct: 272 KYAIGDEIQGLNSQMIEDYIKYLGNLRAKGLGLGKIYEGYEEEPQSMKWVSEYSDPNQVK 331

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE +V+ Y + + ++ D
Sbjct: 332 TDFFEGKVSAYSKSSVIEDD 351


>gi|149408710|ref|XP_001506085.1| PREDICTED: similar to 5,10-methenyltetrahydrofolate synthetase
           [Ornithorhynchus anatinus]
          Length = 394

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ + ++  A  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVKEIIINAVRIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFF
Sbjct: 310 TEALPVKLIGMNCTLMKQYIEFVADRLLLELGFSKIFK-VENPFDFM-ENISLEGKTNFF 367

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 368 EKRVGEYQR 376


>gi|52077136|dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|52077275|dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|186920364|gb|ACC95435.1| ribonucleotide diphosphate reductase small subunit 1 [Oryza sativa
           Japonica Group]
          Length = 339

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  + + R ++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYDLLR-------GKLDEARVREIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFF
Sbjct: 250 CDALPVALVGMNGDLMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFF 307

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 308 EKRVGDYQKAS 318


>gi|316971821|gb|EFV55552.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
          Length = 366

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 75/136 (55%), Gaps = 10/136 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  + + R ++ EA  +E  + 
Sbjct: 229 MPGLTFSNELISRDEGLHCDFACLLYS-------HLKKKPTEDRVRQIITEAVSIEQEFL 281

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++++A+R   ++G   ++  +ENPF +M E+I L+ + NFF
Sbjct: 282 TDALPVRLIGMNCVLMSQYIEYVADRLLVELGCSKVYN-SENPFDFM-EMISLEGKTNFF 339

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+ AG+  D
Sbjct: 340 EKRVGEYQK-AGVMAD 354


>gi|149194868|ref|ZP_01871962.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
 gi|149135027|gb|EDM23509.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
          Length = 346

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 3/134 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  H     ++  +IK E P L+T E  +  + ML+ A  LE  + 
Sbjct: 207 MLGSAQMIRFIQRDEVTHTLLFANIFKEIKKEFPDLFTPEVIRNIKDMLYAAYELERDWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEK- 117
                   +GL+    +++ +++AN+R H +GLE LF     +NP  W        ++K 
Sbjct: 267 FYITNDEILGLSKELIDRFTKYLANKRAHAMGLELLFPEIGLKNPISWFDSFSSFNEQKT 326

Query: 118 NFFETRVTEYQQGA 131
           NFFE  V  Y +G+
Sbjct: 327 NFFEGNVVNYSKGS 340


>gi|75076796|sp|Q4R7Q7|RIR2_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|67969020|dbj|BAE00865.1| unnamed protein product [Macaca fascicularis]
          Length = 389

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 252 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRVEQEFL 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 362

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 363 EKRVGEYQR 371


>gi|68069763|ref|XP_676793.1| ribonucleotide reductase small subunit [Plasmodium berghei strain
           ANKA]
 gi|56496646|emb|CAI04349.1| ribonucleotide reductase small subunit, putative [Plasmodium
           berghei]
          Length = 158

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 74/129 (57%), Gaps = 9/129 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E
Sbjct: 23  GLTFSNELISRDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICE 75

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE 
Sbjct: 76  SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWM-DLISLQGKTNFFEK 133

Query: 123 RVTEYQQGA 131
           RV +YQ+  
Sbjct: 134 RVADYQKSG 142


>gi|103487260|ref|YP_616821.1| ribonucleotide-diphosphate reductase subunit beta [Sphingopyxis
           alaskensis RB2256]
 gi|98977337|gb|ABF53488.1| Ribonucleoside-diphosphate reductase [Sphingopyxis alaskensis
           RB2256]
          Length = 354

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   L TK  ++       +   LE A+ 
Sbjct: 178 MKGMGQIVSWSIRDESLHCEGIIKLFHAFTKERGCL-TKAVKEDIIDTCQKTVRLEDAFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                +G V G+     ++Y+++IA+ R  Q+G +P++   E+P PW++ +++  +  NF
Sbjct: 237 DLAFEQGPVPGMTPKEIKRYIRYIADWRLGQLGFQPIYMIDEHPLPWLAPLLNGVEHANF 296

Query: 120 FETRVTEYQQGA 131
           FETR TEY +GA
Sbjct: 297 FETRATEYSKGA 308


>gi|291412327|ref|XP_002722439.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Oryctolagus
           cuniculus]
          Length = 400

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 263 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVQEIIVNAVRIEQEFL 315

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 316 TEALPVKLIGMNCALMKQYIEFVADRLLLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 373

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 374 EKRVGEYQR 382


>gi|255323570|ref|ZP_05364700.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
 gi|255299284|gb|EET78571.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
          Length = 340

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T E + K   M   A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRTERPDLFTPETEAKIYDMFERAGELEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      EQY++++ ++R   IGL+  +    +P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEQYIRYLIDQRLVAIGLKRRYN-VPHPIKWVDDFAKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE +VT Y +G+
Sbjct: 323 FEAKVTNYSKGS 334


>gi|167760514|ref|ZP_02432641.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
 gi|167661880|gb|EDS06010.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
          Length = 347

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ ++K E P L+T+   ++ R M+ E    EI++ 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRNILLELKKEEPQLFTESRIEEYREMIKEGCQQEISWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
           H  +     GLN      Y+Q++ N RC  +G  P+++ + + P    W+S+  +    K
Sbjct: 267 HYVIGDDIQGLNRDMVTDYIQYLGNLRCTNLGFAPIYEGHVKEPDSMSWVSQFSNANMIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y + + L
Sbjct: 327 TDFFEARSTAYAKSSAL 343


>gi|302833193|ref|XP_002948160.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
 gi|300266380|gb|EFJ50567.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
          Length = 354

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++     I RDE LH +F   +         HL  +  +++   ++ EA  LE  + 
Sbjct: 207 MPGLSFSNCLISRDEGLHCDFACCLYG-------HLKNRLSRERVVKIVDEAVRLEDEFC 259

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+NA    QY++F+A+R    +G +  +  T NPF WM E+I L+ + NFF
Sbjct: 260 TEALSCELLGMNADLMRQYIRFVADRLLVSLGYDKYYN-TVNPFDWM-EMISLQGKANFF 317

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  D
Sbjct: 318 ERRVGEYQRACVMAGD 333


>gi|149721713|ref|XP_001493623.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) [Equus
           caballus]
          Length = 351

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVDLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 325 EKRVSEYQRFA 335


>gi|126303832|ref|XP_001381111.1| PREDICTED: similar to hCG23833, [Monodelphis domestica]
          Length = 493

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  ++K + ++  A  +E  + 
Sbjct: 356 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEEKVKEIIINAVRIEQEFL 408

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 409 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKIFR-VENPFDFM-ENISLEGKTNFF 466

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 467 EKRVGEYQR 475


>gi|308184827|ref|YP_003928960.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
 gi|308060747|gb|ADO02643.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
          Length = 341

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 72/132 (54%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E+++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEVSWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|46122063|ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1]
          Length = 399

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F         + + HL  +  +Q  + ++ +A  +E  + 
Sbjct: 250 MPGLSFSNELISRDEGLHTDFAC-------LLHSHLKGRASKQMIQDIITDAVSIEQEFL 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFF
Sbjct: 303 TEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYKST-NPFDFM-ENISLGGKTNFF 360

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   L
Sbjct: 361 EKRVADYQKAGVL 373


>gi|194690416|gb|ACF79292.1| unknown [Zea mays]
 gi|194704028|gb|ACF86098.1| unknown [Zea mays]
 gi|195619132|gb|ACG31396.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|223943167|gb|ACN25667.1| unknown [Zea mays]
          Length = 339

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  + + R ++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYDLLR-------GKLDESRVREIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 250 CDALPVALVGMNGGLMSQYIEFVADRLLMALGHRKMYN-VANPFDWM-ELISLQGKTNFF 307

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 308 EKRVGEYQKAS 318


>gi|212274629|ref|NP_001130908.1| hypothetical protein LOC100192012 [Zea mays]
 gi|195636980|gb|ACG37958.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  + + R ++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYDLLR-------GKLDESRVREIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 250 CDALPVALVGMNGGLMSQYIEFVADRLLMALGHRKMYN-VANPFDWM-ELISLQGKTNFF 307

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 308 EKRVGEYQKAS 318


>gi|301117384|ref|XP_002906420.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262107769|gb|EEY65821.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 379

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 76/134 (56%), Gaps = 10/134 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE +H +F   + +++  + P     E  + + T+ HE       + 
Sbjct: 242 MPGLSFSNELISRDEGMHTDFACLLYSKLVTKLPESRVHEIVRDAVTIEHE-------FV 294

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R  + +G+  ++ + +NPF WM ++I L+ + NFF
Sbjct: 295 RDSLPVELIGMNSGLMCQYIEFVADRLLYSLGVSKIY-HAKNPFDWM-DMISLQGKTNFF 352

Query: 121 ETRVTEYQQ-GAGL 133
           E RV EY + G G+
Sbjct: 353 EKRVGEYSKAGVGV 366


>gi|225451453|ref|XP_002269951.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147804660|emb|CAN64484.1| hypothetical protein VITISV_012640 [Vitis vinifera]
          Length = 329

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ ++  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKAIVADSVDIEREFV 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N+    QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFF
Sbjct: 241 CDALPCALVGMNSALMSQYIEFVADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 299 EKRVGEYQKAS 309


>gi|225320685|dbj|BAH29738.1| ribonucleoside-diphosphate reductase subunit M2 [Dicyema japonicum]
          Length = 337

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K + P       + +   ++ EA +LE  + 
Sbjct: 197 MPGLTYSNELISRDEGLHTDFACLLYHHLKKKLP-------RDRILQIITEAVVLEKEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++G +  + Y +NPF +M E I L  + NFF
Sbjct: 250 TEALPVALIGMNVNLMSQYIEFVADRLIIELGYDKHY-YAQNPFDFM-ENISLSGKTNFF 307

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 308 EKRVGEYQR 316


>gi|254517517|ref|ZP_05129573.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
 gi|226911266|gb|EEH96467.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
          Length = 344

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 73/135 (54%), Gaps = 2/135 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    +++ ++++E P ++T E + + + M+  A   EI++ 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNILKELQLEQPEIFTDEVKNQLKEMMKTAVEHEISWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEK-N 118
           +  +     G+N      Y++++ N R   IGL+ +++ +  NP  W+  + D    K +
Sbjct: 266 NYVIGDNIQGINKNLINDYIKYLGNLRMKAIGLDAIYEGHDNNPAAWVDILSDANSVKTD 325

Query: 119 FFETRVTEYQQGAGL 133
           FFE + T Y +   L
Sbjct: 326 FFEAKSTAYAKAGAL 340


>gi|38232564|gb|AAR15079.1| ribonucleotide reductase R2 subunit variant [Aedes albopictus]
          Length = 219

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  Q++   ++ EA L+E  + 
Sbjct: 82  MPGLTFSNELISRDEGLHTDFACLMF-------KYLVQKPSQERVIEIIREAVLIEQEFL 134

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G++ ++  T+NPF +M E I L+ + NFF
Sbjct: 135 TKALPVDLLGMNCELMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFF 192

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 193 EKKVGEYQK 201


>gi|215401441|ref|YP_002332744.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
 gi|209483982|gb|ACI47415.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
          Length = 313

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 15/136 (11%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN---QIKIENPHLWTKEFQQKSRTMLHEATLLEI 57
           M G+    + I RDE LH NF     N     K++ P +           M  EA  +E+
Sbjct: 179 MPGLTFSNELISRDEGLHTNFACLYYNTRVDQKLDVPTV---------SDMFAEAVAIEM 229

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
            +  E +P+  VG+NA    +Y++F+A+R   Q+   P   +TENPF +M+  I L+ + 
Sbjct: 230 EFFAEALPESLVGMNAEMMRKYIEFVADRLLVQLKY-PKIYHTENPFEFMNN-ISLEGKT 287

Query: 118 NFFETRVTEYQQ-GAG 132
           NFFE RV EY++ GAG
Sbjct: 288 NFFEKRVGEYKRFGAG 303


>gi|167519412|ref|XP_001744046.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778008|gb|EDQ91624.1| predicted protein [Monosiga brevicollis MX1]
          Length = 329

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 76/136 (55%), Gaps = 10/136 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        +  +++   ++ +A  +E  + 
Sbjct: 192 MPGLTFSNELISRDEGLHTDFACLMFSMLK-------KRPSKERVTGIIMDAVEIEQDFL 244

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P G +G+NA   +QY++F+++R    +G E +F  +ENPF +M E I ++ + NFF
Sbjct: 245 TNALPCGLLGMNATLMKQYIEFVSDRLLVALGCEKIFN-SENPFDFM-ESISIEGKTNFF 302

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+ AG+  D
Sbjct: 303 EKRVGEYQK-AGVMAD 317


>gi|138894466|ref|YP_001124919.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247935|ref|ZP_03146637.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
 gi|134265979|gb|ABO66174.1| Ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|196212719|gb|EDY07476.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
          Length = 344

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++    +  ++  E P   T E    +R+   +A  LEI +A
Sbjct: 204 MVATSTMINYINRDEHIHVDLFAKIFKEVLNEYPEYRTPELADFARSTFMKAAELEIEWA 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEK 117
            E +     G++    E Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  
Sbjct: 264 GEIIGNDIDGIDLADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-S 322

Query: 118 NFFETRVTEYQQ 129
           +FFE +  +Y +
Sbjct: 323 DFFEQKPRQYTK 334


>gi|323486976|ref|ZP_08092290.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
 gi|323399688|gb|EGA92072.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
          Length = 347

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I +++ E P L+++E     R M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GL       Y++++ N RC  +G EPL+  Y   P    W+S+  +    K
Sbjct: 267 CYAIGDEVPGLTKQMITDYIRYLGNLRCSNLGFEPLYDGYAHEPETMAWVSQYSNANMIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y + + L
Sbjct: 327 TDFFEARSTAYAKSSAL 343


>gi|163784572|ref|ZP_02179421.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880158|gb|EDP73813.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1]
          Length = 139

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 3/129 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAY 59
           M  +    + ++ DESLHL  GI+ I  I  ENP +    +F +  R  + +A  LE+ Y
Sbjct: 9   MKNVVSGVELVLIDESLHLQNGIEAILTIIEENPEIVDDIKFVENIRDTIIDAVELELNY 68

Query: 60  AHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                    + G++    E YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  N
Sbjct: 69  LKTKFGGTTIFGVSYKELEMYMKYIADRRLEELGFDPQFNIQQNPLKFLQKE-DVKKLTN 127

Query: 119 FFETRVTEY 127
           FFE   TEY
Sbjct: 128 FFEVSSTEY 136


>gi|118383611|ref|XP_001024960.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila]
 gi|89306727|gb|EAS04715.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila SB210]
          Length = 376

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +   N  L  +E  +    ++ EA  +E  + 
Sbjct: 239 MPGLTFSNELISRDEGLHTDFACLLYSML---NKKLTKEEIYE----IITEAVEIEKEFI 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G+ P F  ++NPF WM ++I ++ + NFF
Sbjct: 292 SEALPVELIGMNSNMMKQYLEFVADRLLFALGV-PKFYNSKNPFEWM-DMISIQGKTNFF 349

Query: 121 ETRVTEYQQG 130
           E RV EYQ+ 
Sbjct: 350 EKRVGEYQKA 359


>gi|32266105|ref|NP_860137.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           hepaticus ATCC 51449]
 gi|32262154|gb|AAP77203.1| ribonucleoside diphosphate reductase [Helicobacter hepaticus ATCC
           51449]
          Length = 349

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++I+ ++ E  HL+T   +++   M  +A  +E  + 
Sbjct: 213 MLGSAQMIRFIQRDEVTHLLLFQNMISSLRKEQGHLFTPSLEEEVVEMFKKAVEIESQWG 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +    +Y+Q++A+ R   +GL  L+  ++NP  W+ +      +K NF
Sbjct: 273 EYITQGQILGLTSEIIREYIQYLADARLKAVGLPQLYG-SKNPIKWVDQFASFNDQKTNF 331

Query: 120 FETRVTEYQQGA 131
           FE +VT Y +G+
Sbjct: 332 FEAKVTNYSKGS 343


>gi|330804590|ref|XP_003290276.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
 gi|325079602|gb|EGC33194.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
          Length = 335

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 13/131 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIA 58
           M G+    + I RDE LH NF   +  ++  K+E+  L           ++ +A + E  
Sbjct: 189 MPGLTFSNELISRDEGLHCNFACLLYTKLINKLESKTL---------EAIIRDAVVCEKE 239

Query: 59  YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
           +  +++P   +G+N+ S  QY++F A+R    +G + ++  + NPF WM E+I L+++ N
Sbjct: 240 FICDSLPVDLIGMNSRSMSQYIEFCADRLLVSLGYKKIYNAS-NPFDWM-EMISLQRKTN 297

Query: 119 FFETRVTEYQQ 129
           FFE +V EY +
Sbjct: 298 FFEGKVAEYAK 308


>gi|148234092|ref|NP_001079369.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus laevis]
 gi|27371032|gb|AAH41209.1| MGC52676 protein [Xenopus laevis]
          Length = 386

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFK-------HLIRKPSEERVVELITDAVQIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G + +FK T NPF +M E I L+ + NFF
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFKKVFKAT-NPFDFM-ENISLEGKTNFF 359

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 360 EKKVGEYQK 368


>gi|56118690|ref|NP_001007890.1| ribonucleotide reductase M2, gene 2 [Xenopus (Silurana) tropicalis]
 gi|51258920|gb|AAH80161.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK T NPF +M E I L+ + NFF
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFF 359

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 360 EKKVGEYQK 368


>gi|89268988|emb|CAJ81953.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
 gi|89269815|emb|CAJ81580.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK T NPF +M E I L+ + NFF
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFF 359

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 360 EKKVGEYQK 368


>gi|296282225|ref|ZP_06860223.1| ribonucleotide-diphosphate reductase subunit beta [Citromicrobium
           bathyomarinum JL354]
          Length = 354

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 73/132 (55%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + ++  +     +TK  ++    +  ++  LE  + 
Sbjct: 178 MKGMGQIVSWSVRDESLHCEGIIRLFHEF-VRERDCYTKAVKEDIIDICQKSVRLEDNFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+ A   ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NF
Sbjct: 237 DLAFEMGPVSGMTAKEIKKYIRYIADWRLGQLGLQPIYMIDEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGA 131
           FE R TEY +GA
Sbjct: 297 FEQRATEYSKGA 308


>gi|66822029|ref|XP_644369.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|66823381|ref|XP_645045.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|41019487|sp|P42521|RIR2_DICDI RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|29611978|gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum]
 gi|60472492|gb|EAL70444.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|60472997|gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
          Length = 338

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   +  +++ + +P +  K        M+ +A   E  +
Sbjct: 194 MQGLTFSNELISRDEGLHCDFACLLYTKLQRKLDPKVIEK--------MIRDAVECEKEF 245

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             E++P   +G+N+ S  QY++F A+R    +G + +F  + NPF WM E+I L+++ NF
Sbjct: 246 ICESLPVDLIGMNSRSMSQYIEFCADRLVVSLGYKKIFN-SSNPFEWM-EMISLQRKSNF 303

Query: 120 FETRVTEYQQ 129
           FE +V EY +
Sbjct: 304 FEGKVAEYAK 313


>gi|324519017|gb|ADY47264.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 376

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  +++   ++ EA  +E  Y 
Sbjct: 239 MPGLTHSNELISRDEGLHRDFACLMFS-------HLKKKPNKERIYEIIREAVKIEQEYL 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N     QY++++A+    ++    L+   ENPF +M+  I ++ + NFF
Sbjct: 292 TEALPVGLIGMNCELMSQYIEYVADHLLTELKCPKLYN-MENPFDFMAR-ISIEAKTNFF 349

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV+EYQ+   L  D
Sbjct: 350 EKRVSEYQKAGVLSTD 365


>gi|323692021|ref|ZP_08106269.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
 gi|323503944|gb|EGB19758.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
          Length = 347

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I +++ E P L+++E     R M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GL       Y++++ N RC  +G EPL+  Y   P    W+S+  +    K
Sbjct: 267 CYAIGDEVPGLTKQMITDYIRYLGNLRCSNLGFEPLYDGYVHEPETMAWVSQYSNANMIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y + + L
Sbjct: 327 TDFFEARSTAYAKSSAL 343


>gi|4894211|gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max]
          Length = 339

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++   P +       +   ++HEA  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHCDFACLLYSLLR--KPLI-----SDQVHKLVHEAVEIETEFV 250

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +   ENPF WM E I L+ + NFF
Sbjct: 251 CDALPCALIGMNSVLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANFF 308

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 309 ERRVGDYQKAS 319


>gi|256545921|ref|ZP_05473276.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398343|gb|EEU11965.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
          Length = 352

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +IN +K E P L+T E ++   ++L E    EIA+ 
Sbjct: 212 MPGTVQEIRYINRDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GLN+   E Y++++ N R   +GL  +++ Y + P    W+SE  D  + K
Sbjct: 272 KYAIGDEIQGLNSQMIEDYIKYLGNLRAKGLGLGTIYEGYEDEPQSMKWVSEYSDPNQVK 331

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE +V+ Y + + ++ D
Sbjct: 332 TDFFEGKVSAYSKSSVIEDD 351


>gi|290977320|ref|XP_002671386.1| predicted protein [Naegleria gruberi]
 gi|284084954|gb|EFC38642.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 73/130 (56%), Gaps = 8/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   + + +K      +TK  QQ   +++ EA  +E  + 
Sbjct: 200 MPGLAFSNELISRDEGLHTDFACLLYSTLK------FTKLPQQVVHSLVSEAVEIEKEFI 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+   +QY++ +A+R    +G + ++  + NPF WM+ +I +  + NFF
Sbjct: 254 CESLPVDLIGMNSRLMQQYIEMVADRLLVSLGYDKIYN-SPNPFDWMN-IISVSGKTNFF 311

Query: 121 ETRVTEYQQG 130
           E +V EY + 
Sbjct: 312 EKKVGEYAKA 321


>gi|157126966|ref|XP_001654749.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
 gi|15638625|gb|AAL05057.1|AF411297_1 ribonucleotide reductase 2 [Aedes aegypti]
 gi|82469974|gb|ABB77235.1| ribonucleotide reductase small subunit R2 [Aedes aegypti]
 gi|108873070|gb|EAT37295.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
          Length = 397

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  Q++   ++ EA L+E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G++ ++  T+NPF +M E I L+ + NFF
Sbjct: 313 TKALPVDLLGMNCDLMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFF 370

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 371 EKKVGEYQK 379


>gi|159465291|ref|XP_001690856.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
 gi|158279542|gb|EDP05302.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
          Length = 493

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++     I RDE LH +F   + +       HL  +  +++   ++ EA  LE  + 
Sbjct: 348 MPGLSFSNVLISRDEGLHCDFACCLYS-------HLKNRLSRERVLQIVDEAVQLEDEFC 400

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+NA    QY++F+A+R    +G E  +  T NPF WM E+I L+ + NFF
Sbjct: 401 TEALSCELLGMNADLMRQYIRFVADRLLVSLGYEKHYN-TRNPFDWM-EMISLQGKANFF 458

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 459 ERRVGEYQRAG 469


>gi|294945135|ref|XP_002784568.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239897674|gb|EER16364.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 238

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N +       +T+   ++   ++  A  +E  + 
Sbjct: 84  MPGLTFSNELISRDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFI 137

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    +Y++F+A+R    +G   L+  T NPF WM ++I L+ + NFF
Sbjct: 138 SESLPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWM-KMISLQGKTNFF 195

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+G 
Sbjct: 196 EKRVGEYQKGG 206


>gi|162147608|ref|YP_001602069.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542240|ref|YP_002274469.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786185|emb|CAP55767.1| putative ribonucleotide reductase small subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529917|gb|ACI49854.1| Ribonucleoside-diphosphate reductase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 353

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 1/130 (0%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+ +   + +RDE+LH      +      ENP +WT   +     +  +    E A+   
Sbjct: 204 GMGQIVSWSVRDETLHCLSMARLFRVFIQENPEIWTDALRADIVQICRDIVEHEDAFIDL 263

Query: 63  TMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
               G V GL+    + Y++FIA+RR + +GL+ ++    NP PW+ ++++  +  NFFE
Sbjct: 264 CFEMGPVEGLDGDLVKTYIRFIADRRLNLLGLDGIYDVPSNPLPWVDDMLNAVEHTNFFE 323

Query: 122 TRVTEYQQGA 131
            R TEY + +
Sbjct: 324 NRSTEYSRAS 333


>gi|157164305|ref|YP_001467763.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           concisus 13826]
 gi|112800348|gb|EAT97692.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           concisus 13826]
          Length = 340

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T E + K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFTPETEAKIYDMFEKAGNLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      EQY+ ++ ++R   IGL+  +    +P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEQYIHYLIDQRLVAIGLKRKYN-VAHPIKWVDDFAKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE +VT Y +G+
Sbjct: 323 FEAKVTNYSKGS 334


>gi|82538850|ref|XP_723858.1| ribonucleotide reductase small chain [Plasmodium yoelii yoelii str.
           17XNL]
 gi|145580416|pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580417|pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580418|pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580419|pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580420|pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580421|pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580422|pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580423|pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|23478298|gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii]
          Length = 349

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 73/129 (56%), Gaps = 9/129 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + ++ + P       +   + ++ EA  +E ++  E
Sbjct: 214 GLTFSNELISRDEGLHTDFNCLIYSLLENKLP-------ENVVQNIVKEAVEVERSFICE 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE 
Sbjct: 267 SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWM-DLISLQGKTNFFEK 324

Query: 123 RVTEYQQGA 131
           RV +YQ+  
Sbjct: 325 RVADYQKSG 333


>gi|283768723|ref|ZP_06341634.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
 gi|283104509|gb|EFC05882.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
          Length = 348

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ +++ E P L+T    Q  + M+HE    EIA+ 
Sbjct: 208 MPGSVQEIRYINRDENTHLWLFRNILLELQKEEPELFTDSNIQMIKDMIHEGVQQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GLN+   E Y++++ N R   +GL  L++ Y E P    W+ +  D    K
Sbjct: 268 QYVIGNNIPGLNSQMVEDYIKYLGNTRFATLGLGNLYEGYEEEPETMRWVKQYSDANMVK 327

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE RVT Y + + ++ D
Sbjct: 328 TDFFEARVTAYAKSSAIEDD 347


>gi|224046583|ref|XP_002198998.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 362

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       +L  +  +++   ++  A  +E  + 
Sbjct: 225 MPGLTFSNELISRDEGLHCDFACLMFH-------YLVNRPSEERVCEIIVNAVEIEQEFL 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFF
Sbjct: 278 TEALPVGLIGMNCTLMKQYIEFVADRLLMELGFSKVFN-VENPFDFM-ENISLEGKTNFF 335

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 336 EKRVSEYQRFA 346


>gi|322693757|gb|EFY85606.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           acridum CQMa 102]
          Length = 411

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + + HL  +  +Q    ++ +A  +E  + 
Sbjct: 261 MPGLTFSNELISRDEGLHTDFAC-------LLHSHLKNRASKQIIHDIITDAVAIEKEFL 313

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFF
Sbjct: 314 TEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFF 371

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   L
Sbjct: 372 EKRVGDYQKAGVL 384


>gi|55742360|ref|NP_001007164.1| ribonucleoside-diphosphate reductase subunit M2 B [Danio rerio]
 gi|29561808|emb|CAD87804.1| novel protein similar to vertebrate ribonucleotide reductase M2 B
           (TP53 inducible) (RRM2B) [Danio rerio]
          Length = 349

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH NF   +I    ++ P +       +   ++ +A  +E  + 
Sbjct: 212 MPGLTYSNELISRDEGLHCNFAC-LIYSYLVKKPSV------DRVNDIIAKAVSIEQEFL 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R    +GL P    +ENPF +M E I L+ + NFF
Sbjct: 265 TEALPVNLIGMNCSLMKQYIEFVADRLLTDLGL-PKAYCSENPFDFM-ESISLEGKTNFF 322

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 323 EKRVAEYQR 331


>gi|332045030|gb|EGI81223.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4]
          Length = 327

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 8/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F +       +   HL  K  +++ R +L +A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGMHCDFAV------HLHEHHLINKVPKERIREILVDALNIEREFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+ +     +G E  +  T NPF +M ++I L+ + NFF
Sbjct: 241 TESLPVSLIGMNSKLMSQYLEFVTDGLLQDLGCEKEYG-TANPFDFM-DMISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+   L
Sbjct: 299 EKRVSEYQKAGVL 311


>gi|154174558|ref|YP_001409201.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           curvus 525.92]
 gi|112803525|gb|EAU00869.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           curvus 525.92]
          Length = 340

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T E ++K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRAERSDLFTPEMEEKIYDMFEKAGNLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   IGL+  +   ++P  W+ +      +K NF
Sbjct: 264 RYITQNQIMGFTDDIIEEYIHYLVDQRLVAIGLKRKYN-AKHPIKWVDDFAKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE++VT Y +G+
Sbjct: 323 FESKVTNYSKGS 334


>gi|73974202|ref|XP_858105.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 4 [Canis familiaris]
          Length = 374

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 18/147 (12%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG-------IDVINQIKIENPHLWTKEFQQKSRT--MLHE 51
           M G+    + I RDE LH +F        ++  ++ ++    +   E +Q SR   M+  
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQVSREAYMIST 273

Query: 52  ATLLEIA-------YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 104
           +  LEIA       +  E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF
Sbjct: 274 SLFLEIATCRSKHEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPF 332

Query: 105 PWMSEVIDLKKEKNFFETRVTEYQQGA 131
            +M E I L+ + NFFE RV EYQ+ A
Sbjct: 333 DFM-ENISLEGKTNFFEKRVAEYQRFA 358


>gi|929959|gb|AAA74020.1| ribonuleotide reductase small subunit [Urechis caupo]
          Length = 399

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  Q++   ++ +A  +E ++ 
Sbjct: 259 MPGLTFSNELISRDEGLHCDFACLMFS-------HLKNKPSQERVYDIIRDAVRIEQSFL 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++G  P     ENPF +M   I L+ + NFF
Sbjct: 312 TEALPVNLIGMNCKLMAQYIEFVADRLLLELGC-PKIWNVENPFDFMDN-ISLEGKTNFF 369

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 370 EKRVGEYQK 378


>gi|109947017|ref|YP_664245.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           acinonychis str. Sheeba]
 gi|109714238|emb|CAJ99246.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           acinonychis str. Sheeba]
          Length = 341

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVKIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKIYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|45268714|dbj|BAD12266.1| p53-inducible ribonucleotide reductase small subunit 2 short form
           gamma [Homo sapiens]
          Length = 139

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 13  RDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLN 72
           +DE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N
Sbjct: 14  QDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMN 66

Query: 73  APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 131
               +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 67  CILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 123


>gi|209877302|ref|XP_002140093.1| ribonucleotide-diphosphate reductase, small subunit
           [Cryptosporidium muris RN66]
 gi|209555699|gb|EEA05744.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Cryptosporidium muris RN66]
          Length = 346

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +FG  +   +    P+   +E       ++ EA  +E A+ 
Sbjct: 209 MPGLTFSNELISRDEGIHADFGCLLYKTLNNRLPYGRVQE-------IIAEAVEVERAFL 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R    + +  ++  T NPF WM ++I L+ + NFF
Sbjct: 262 CDSLPVDLIGMNSRLMAQYIEFVADRLLFALDVPKIYNVT-NPFDWM-DLISLQGKTNFF 319

Query: 121 ETRVTEYQQGA 131
           E RV EYQ   
Sbjct: 320 EKRVAEYQMAG 330


>gi|322709430|gb|EFZ01006.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           anisopliae ARSEF 23]
          Length = 414

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + + HL  +  +Q    ++ +A  +E  + 
Sbjct: 264 MPGLTFSNELISRDEGLHTDFAC-------LLHSHLKNRASKQVIYDIITDAVAIEQEFL 316

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFF
Sbjct: 317 TEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFF 374

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   L
Sbjct: 375 EKRVGDYQKAGVL 387


>gi|221060582|ref|XP_002260936.1| ribonucleotide reductase small subunit [Plasmodium knowlesi strain
           H]
 gi|193811010|emb|CAQ42908.1| ribonucleotide reductase small subunit,putative [Plasmodium
           knowlesi strain H]
          Length = 349

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 73/129 (56%), Gaps = 9/129 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E
Sbjct: 214 GLTFSNELISRDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICE 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F + +NPF WM ++I L+ + NFFE 
Sbjct: 267 SLPCDLIGMNSRLMSQYIEFVADRLLECLGSRKIF-HAKNPFNWM-DLISLQGKTNFFEK 324

Query: 123 RVTEYQQGA 131
           RV +YQ+  
Sbjct: 325 RVADYQKSG 333


>gi|302904131|ref|XP_003049009.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729943|gb|EEU43296.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 389

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + + HL  +  +Q  + ++ +A  +E  + 
Sbjct: 240 MPGLTFSNELISRDEGLHTDFAC-------LLHSHLKGRASKQVIQDIITDAVTIEQEFL 292

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA   +QY++F+A+R    +G E ++K + NPF +M E I L  + NFF
Sbjct: 293 TEALPCALLGMNADLMKQYIEFVADRLLVALGNEKVYK-SANPFDFM-ENISLGGKTNFF 350

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   L
Sbjct: 351 EKRVGDYQKAGVL 363


>gi|294890631|ref|XP_002773236.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239878288|gb|EER05052.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N +       +T+   ++   ++  A  +E  + 
Sbjct: 196 MPGLTFSNELISRDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFI 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    +Y++F+A+R    +G   L+  T NPF WM ++I L+ + NFF
Sbjct: 250 SESLPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWM-KMISLQGKTNFF 307

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+G 
Sbjct: 308 EKRVGEYQKGG 318


>gi|291220709|ref|XP_002730368.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 402

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  QQ+   ++ +A  +E  + 
Sbjct: 265 MPGLTFSNELISRDEGLHCDFACLMFS-------HLTNKPSQQRIIEIIRDAVKIEQEFL 317

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    +QY++F+A+R    +G   ++   ENPF +M E I L+ + NFF
Sbjct: 318 TDALPVSLIGMNKDLMKQYIEFVADRLLLDLGCNKIYN-KENPFDFM-ENISLEGKTNFF 375

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 376 EKRVGEYQK 384


>gi|291165654|gb|EFE27703.1| ribonucleoside-diphosphate reductase, beta subunit [Filifactor
           alocis ATCC 35896]
          Length = 348

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I ++K E P L+T E  +  R M+ +    EI +A
Sbjct: 208 MPGTVQEIRYINRDENSHLWLFRSIILELKKEEPELFTPENIEVFRNMIRQGVEEEIKWA 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
           +  +     GL     E Y++++ N RC  +G EP+++ Y   P    W+SE  D    K
Sbjct: 268 NYVIGDHIKGLTMQMVEDYLKYLGNLRCRGLGFEPIYEGYQREPESMSWVSEYSDPNAIK 327

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE +V+ Y + + ++ D
Sbjct: 328 TDFFEGKVSAYAKSSVIEDD 347


>gi|317011285|gb|ADU85032.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SouthAfrica7]
          Length = 341

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKIYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|298713498|emb|CBJ27053.1| Ribonucleoside-diphosphate reductase small chain [Ectocarpus
           siliculosus]
          Length = 504

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   ++        K  ++    ++ EA  +E ++ 
Sbjct: 362 MPGLTFSNEMISRDEGLHCDFACQLFASLE-------NKPSRETVMAIVREAVEVEKSFI 414

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+NA    QY++F+A+R    +G    +  T+NPF WM ++I L+ + NFF
Sbjct: 415 CGALPCSLIGMNAGVMSQYIEFVADRLLGSLGYGKSYG-TQNPFDWM-DLISLQGKTNFF 472

Query: 121 ETRVTEYQQG 130
           E RV EYQ+ 
Sbjct: 473 EKRVGEYQKA 482


>gi|317014473|gb|ADU81909.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Gambia94/24]
          Length = 341

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKIYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|266918|sp|P07201|RIR2_SPISO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit;
           AltName: Full=p41
 gi|10342|emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula
           solidissima]
          Length = 384

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  Q++   ++ EA  +E  + 
Sbjct: 244 MPGLTFSNELISRDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFL 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++  + L+   ENPF +M E I L+ + NFF
Sbjct: 297 TEALPCRLIGMNCDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFF 354

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 355 EKRVGEYQK 363


>gi|10344|emb|CAA26307.1| unnamed protein product [Spisula solidissima]
          Length = 300

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  Q++   ++ EA  +E  + 
Sbjct: 160 MPGLTFSNELISRDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFL 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++  + L+   ENPF +M E I L+ + NFF
Sbjct: 213 TEALPCRLIGMNCDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFF 270

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 271 EKRVGEYQK 279


>gi|27923845|sp|Q9QTF2|RIR2_RSIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|5688956|dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus]
 gi|327396894|dbj|BAK14260.1| ribonucleotide diphosphate reductase small subunit [Red sea bream
           iridovirus]
          Length = 312

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   +  Q+         K  Q  +  ++ +A  +E A+ 
Sbjct: 176 MPGLAFSNELISRDEGLHCDFACMLFRQMA-------NKPCQDDAHQIISDAVDIETAFF 228

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+N+ S + Y+QF+A+R    +G   ++  + NPF +M   I ++ + NFF
Sbjct: 229 REALKTPLLGMNSDSMKLYIQFVADRLLDALGYAKMYNVS-NPFDFMDN-ISIEGKTNFF 286

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 287 ERRVSEYQR 295


>gi|145553335|ref|XP_001462342.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430181|emb|CAK94969.1| unnamed protein product [Paramecium tetraurelia]
          Length = 355

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +   HL  K   Q+   ++  A  +E  + 
Sbjct: 218 MPGLTFSNELISRDEGLHTDFAC-------LLYKHLVNKMSNQRIHEIISSAVEIEKEFI 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G   ++  ++NPF WM ++I L+ + NFF
Sbjct: 271 SEALPVELIGMNSNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWM-DMISLQGKTNFF 328

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 329 ERRVGDYQKAG 339


>gi|85710107|ref|ZP_01041172.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
 gi|85688817|gb|EAQ28821.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
          Length = 346

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH   GI  +     E     TK  ++    +  +   LE A+ 
Sbjct: 178 MKGMGQIVSWSVRDETLHCE-GIIKMFHTFCEERDCLTKAVKEDIIDICQKTVRLEDAFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+ A   ++Y+++IA+ R  Q+ L+P++   E+P PW+S +++  +  NF
Sbjct: 237 DLAFEMGPVEGMTAKDIKKYIRYIADWRLGQLNLQPIYMIDEHPLPWLSPLLNGVEHANF 296

Query: 120 FETRVTEYQQGA 131
           FE R TEY +GA
Sbjct: 297 FEARATEYSKGA 308


>gi|315586979|gb|ADU41360.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           pylori 35A]
          Length = 341

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|312889900|ref|ZP_07749444.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
 gi|311297432|gb|EFQ74557.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
          Length = 343

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H  F   + + +         K  ++   T++ +A  +E  + 
Sbjct: 205 MPGLTFSNELISRDEGMHCEFACLLYSMLS-------NKLSKEAVTTIIADAVEIEKEFV 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R   ++G + L+  T NPF +M E+I L+ + NFF
Sbjct: 258 TDALPVNLIGMNAKLMSQYIEFVADRWLQELGYDKLYHAT-NPFDFM-EMISLQGKTNFF 315

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV +YQ+   L  D
Sbjct: 316 EKRVGDYQKSGVLNND 331


>gi|210135249|ref|YP_002301688.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori P12]
 gi|210133217|gb|ACJ08208.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori P12]
          Length = 341

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|49899161|gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
          Length = 386

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL +K  ++  + ++  A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFK-------HLISKPSEETVKKIIMNAVEIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    +QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFF
Sbjct: 302 TDALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFF 359

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 360 EKRVGEYQR 368


>gi|319655055|ref|ZP_08009124.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
 gi|317393250|gb|EFV74019.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
          Length = 345

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++  + +  +I  ENP L T E  +  +     A  LEI +A
Sbjct: 205 MVATSTMINYINRDEQIHVDLFVKIFKEILQENPELNTNELSKFVQETFKRAAELEIEWA 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEK 117
            + +     G+     E Y++F AN RC+Q+G E P   Y  NP  W+   E +D  K  
Sbjct: 265 RDVIGSKTEGILLSDVEAYIKFYANIRCNQLGYERPFEGYRTNPLRWIVAYEQVDHGK-S 323

Query: 118 NFFETRVTEYQQ 129
           +FFE +  +Y +
Sbjct: 324 DFFEQKSRQYTK 335


>gi|297380266|gb|ADI35153.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori v225d]
 gi|308062365|gb|ADO04253.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Cuz20]
 gi|317180823|dbj|BAJ58609.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F32]
          Length = 341

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|188527870|ref|YP_001910557.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|188144110|gb|ACD48527.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|308063873|gb|ADO05760.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Sat464]
          Length = 341

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|308183194|ref|YP_003927321.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
 gi|308065379|gb|ADO07271.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
          Length = 341

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|317178607|dbj|BAJ56395.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F30]
          Length = 341

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|254779643|ref|YP_003057749.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori B38]
 gi|254001555|emb|CAX29573.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Helicobacter pylori B38]
          Length = 341

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|126662515|ref|ZP_01733514.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
 gi|126625894|gb|EAZ96583.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
          Length = 325

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 75/136 (55%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F +       + + H+  K  +++   ++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGMHCDFAV------HLHSHHIVNKVPKERITEIIVDALNIERQFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++G + ++  + NPF +M ++I L+ + NFF
Sbjct: 240 TESLPVSLIGMNATLMTQYLEFVTDRLLVELGCDRVYN-SSNPFDFM-DMISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  D
Sbjct: 298 EKRVAEYQKAGVMNSD 313


>gi|15612081|ref|NP_223733.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori J99]
 gi|11387046|sp|Q9ZKC3|RIR2_HELPJ RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4155613|gb|AAD06604.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN [Helicobacter
           pylori J99]
 gi|307637755|gb|ADN80205.1| Ribonucleotide reductase of classIa beta subunit [Helicobacter
           pylori 908]
 gi|325996356|gb|ADZ51761.1| Ribonucleotide reductase of class Ia beta subunit [Helicobacter
           pylori 2018]
 gi|325997944|gb|ADZ50152.1| Ribonucleosidase diphosphate reductase beta subunit [Helicobacter
           pylori 2017]
          Length = 341

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|187903099|ref|YP_001883390.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
 gi|187384748|gb|ACD03521.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
          Length = 343

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 71/129 (55%), Gaps = 8/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + +  +  +  P       +++   ++ EA  +E  + 
Sbjct: 199 MPGLTFSNELISRDEGMHCDFAVLLFKRYLVNRPS------EERVGEIVREAVTIEQEFL 252

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G++ ++  T+NPF +M ++I L  + NFF
Sbjct: 253 TDALPVSLIGMNCGLMSQYIEFVADRLLVDLGMKRIYN-TKNPFDFM-DMISLDGKTNFF 310

Query: 121 ETRVTEYQQ 129
           E RV +YQ+
Sbjct: 311 EKRVGDYQR 319


>gi|261838422|gb|ACX98188.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori 51]
          Length = 341

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|170664480|gb|ACB28637.1| small subunit ribonucleotide reductase [Myxoma virus]
 gi|170664652|gb|ACB28808.1| small subunit ribonucleotide reductase [recombinant virus
           6918VP60-T2]
          Length = 322

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K   P       +++  +++ EA ++E  + 
Sbjct: 186 MPGLTFSNELISRDEGLHCDFACLMFKHLK-HTPS------EERVASIIKEAVVIEQRFL 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++G   +F  T NPF +M E I L+ + NFF
Sbjct: 239 TEALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIFSAT-NPFDFM-ENISLEGKTNFF 296

Query: 121 ETRVTEYQQ 129
           E RV++YQ+
Sbjct: 297 EKRVSDYQR 305


>gi|28393533|gb|AAO42187.1| putative ribonucleoside-diphosphate reductase small chain
           [Arabidopsis thaliana]
          Length = 243

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++       TK  + + + ++ +A  +E  + 
Sbjct: 99  MPGLTFSNELISRDEGLHCDFACLIYSLLR-------TKFDEDRLKAIVCDAVEIEREFV 151

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +    VG+N     QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFF
Sbjct: 152 CDALSCALVGMNRELMSQYIEFVADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFF 209

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 210 EKRVGEYQKAS 220


>gi|292658982|gb|ADE34370.1| ribonucleotide reductase small chain [Turbot reddish body
           iridovirus]
          Length = 312

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   +  Q+         K  Q+ +  ++ +A  +E A+ 
Sbjct: 176 MPGLAFSNELISRDEGLHCDFACMLFRQMA-------NKPSQEDAHQIISDAVDIETAFF 228

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+N+ S   Y+QF+A+R    +G   ++    NPF +M   I ++ + NFF
Sbjct: 229 REALKTPLLGMNSDSMRLYIQFVADRLLDALGYAKMYN-VANPFDFMDN-ISIEGKTNFF 286

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 287 ERRVSEYQR 295


>gi|9633651|ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus]
 gi|6523870|gb|AAF14903.1|AF170726_19 ribonucleotide reductase, small subunit [Myxoma virus]
 gi|301134541|gb|ADK63655.1| M015L [Myxoma virus]
          Length = 322

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K   P       +++  +++ EA ++E  + 
Sbjct: 186 MPGLTFSNELISRDEGLHCDFACLMFKHLK-HTPS------EERVASIIKEAVVIEQRFL 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++G   +F  T NPF +M E I L+ + NFF
Sbjct: 239 TEALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIFSAT-NPFDFM-ENISLEGKTNFF 296

Query: 121 ETRVTEYQQ 129
           E RV++YQ+
Sbjct: 297 EKRVSDYQR 305


>gi|330837704|ref|YP_004412345.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
 gi|329749607|gb|AEC02963.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
          Length = 360

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     ++ +++ E P ++T     + R M+ +    EIA+ 
Sbjct: 220 MPGSVQEIRYINRDETTHLWLFRSILREMQKEEPAMFTPNLVDEYRAMIKQGADQEIAWG 279

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
           H  +    VGLN      Y+Q++ N RC  +G +P+++ + + P    W+ +  +    K
Sbjct: 280 HYVIGDDIVGLNKDMVTDYIQYLGNLRCTDLGFQPIYEGHDKEPETMKWVGQYSNANLIK 339

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y +   L
Sbjct: 340 TDFFEARNTAYAKSTSL 356


>gi|145352915|ref|XP_001420779.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581014|gb|ABO99072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 346

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +  ENP L  K   Q    ++ +A  +E  + 
Sbjct: 208 MRGLTFSNELISRDEGLHCDFACLLYSML--ENP-LSEKVLHQ----LVGDAVTIEKEFV 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +    VG+NA     Y++F+A+R   Q+G+  L+    NPF WM E+I L+ + NFF
Sbjct: 261 CDALSCSLVGMNANMMSTYIEFVADRLLLQLGVSKLYNAV-NPFDWM-ELISLQGKANFF 318

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 319 EHRVDQYQKAG 329


>gi|79160106|gb|AAI08038.1| Rrm2b protein [Danio rerio]
          Length = 349

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH NF         +   +L  K    +   ++ +A  +E  + 
Sbjct: 212 MPGLTYSNELISRDEGLHCNFAC-------LMYSYLVKKPSVDRVNDIIAKAVSIEQEFL 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R    +GL P    +ENPF +M E I L+ + NFF
Sbjct: 265 TEALPVNLIGMNCSLMKQYIEFVADRLLTDLGL-PKAYCSENPFDFM-ESISLEGKTNFF 322

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 323 EKRVAEYQR 331


>gi|115466138|ref|NP_001056668.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|55296211|dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|113594708|dbj|BAF18582.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|186920368|gb|ACC95437.1| ribonucleotide diphosphate reductase small subunit 2 [Oryza sativa
           Japonica Group]
 gi|215706414|dbj|BAG93270.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222634884|gb|EEE65016.1| hypothetical protein OsJ_19968 [Oryza sativa Japonica Group]
          Length = 345

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  + + + ++ +A  +E  + 
Sbjct: 203 MPGLTFSNELISRDEGLHCDFACLLYDLLR-------GKLDESRVQEIVADAVDIEREFV 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFF
Sbjct: 256 CDALPVALVGMNGELMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFF 313

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 314 EKRVGDYQKAS 324


>gi|291562343|emb|CBL41159.1| Ribonucleotide reductase, beta subunit [butyrate-producing
           bacterium SS3/4]
          Length = 346

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T    Q  R M+ E    EIA+ 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNIITELQKEQPELFTAGSVQALREMMREGVEQEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIG---LEPLFKYTENPFPWMSEVIDLKKEK 117
           H  +     GLN      Y++++ N R   +G   L P F+       W+S+  D    K
Sbjct: 266 HYVIGDDIPGLNRQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVK 325

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y +   L
Sbjct: 326 TDFFEARSTAYAKSTAL 342


>gi|56419447|ref|YP_146765.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           kaustophilus HTA426]
 gi|56379289|dbj|BAD75197.1| ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           kaustophilus HTA426]
          Length = 346

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++    +  ++  E P   T E     R    +A  LEI +A
Sbjct: 206 MVATSTMINYINRDEHIHVDLFAKIFKEVLNEYPEYRTPELADFVRNTFMKAAELEIEWA 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEK 117
            E +     G++    E Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  
Sbjct: 266 REIIGNDIDGIDLADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-S 324

Query: 118 NFFETRVTEYQQ 129
           +FFE +  +Y +
Sbjct: 325 DFFEQKPRQYTK 336


>gi|224129040|ref|XP_002328875.1| predicted protein [Populus trichocarpa]
 gi|222839305|gb|EEE77642.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFV 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 241 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 299 EKRVGEYQKAS 309


>gi|317012862|gb|ADU83470.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Lithuania75]
          Length = 341

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|218197485|gb|EEC79912.1| hypothetical protein OsI_21460 [Oryza sativa Indica Group]
          Length = 345

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  + + + ++ +A  +E  + 
Sbjct: 203 MPGLTFSNELISRDEGLHCDFACLLYDLLR-------GKLDESRVQEIVADAVDIEREFV 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFF
Sbjct: 256 CDALPVALVGMNGELMSQYIEFVADRLLMALGCKKMYN-VANPFDWM-ELISLQGKTNFF 313

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 314 EKRVGDYQKAS 324


>gi|304439119|ref|ZP_07399038.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
 gi|304372478|gb|EFM26065.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
          Length = 347

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I  +K E P L+T+E  ++ R +L      EIA+ 
Sbjct: 207 MPGTVQEIRYINRDENTHLWLFRSIILDLKKEQPELFTEEKVEEYRALLKYGVEEEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
              +     GL +   E Y++++ N R   +G EPL++  +       W+++  D+   K
Sbjct: 267 KYVIGDDIQGLTSKMVEDYIKYLGNLRATNLGFEPLYEGYDKEVESMKWVTQYADINLLK 326

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE +VT Y + A ++ D
Sbjct: 327 TDFFEAKVTAYSKSAIIEDD 346


>gi|156102402|ref|XP_001616894.1| ribonucleoside-diphosphate reductase small chain [Plasmodium vivax
           SaI-1]
 gi|148805768|gb|EDL47167.1| ribonucleoside-diphosphate reductase small chain, putative
           [Plasmodium vivax]
          Length = 349

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 73/129 (56%), Gaps = 9/129 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E
Sbjct: 214 GLTFSNELISRDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICE 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F + +NPF WM ++I L+ + NFFE 
Sbjct: 267 SLPCDLIGMNSRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWM-DLISLQGKTNFFEK 324

Query: 123 RVTEYQQGA 131
           RV +YQ+  
Sbjct: 325 RVADYQKSG 333


>gi|312130971|ref|YP_003998311.1| ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
 gi|311907517|gb|ADQ17958.1| Ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
          Length = 328

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 76/136 (55%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  +      ++  K  +++  T++ +A  +E  + 
Sbjct: 190 MPGLTFSNELISRDEGLHRDFACLLYTK------YIVNKLPEEQVYTIIKDAVEIEKEFV 243

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NAP   QY++F+A+     + L+ ++  T NPF +M ++I L+ + NFF
Sbjct: 244 SDALPVSLIGMNAPQMCQYIEFVADHLLESLNLKKVYNAT-NPFDFM-DLISLQGKTNFF 301

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+ AG+  D
Sbjct: 302 EKRVGEYQK-AGVTAD 316


>gi|257453171|ref|ZP_05618470.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           3_1_5R]
 gi|317059706|ref|ZP_07924191.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
 gi|313685382|gb|EFS22217.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
          Length = 344

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     +I +IK ENP+ + +E   + R M   A   EI + 
Sbjct: 204 MVGTSDVIRLINRDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+   + E Y +++AN R   IGL P++  +T+NP+  +    D + +   
Sbjct: 261 EHIIGNRVLGITTETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNV 320

Query: 117 -KNFFETRVTEYQQGAGLK-WD 136
             NFFE  VT Y   + +  WD
Sbjct: 321 KSNFFEGTVTSYNMSSSIDGWD 342


>gi|257467364|ref|ZP_05631675.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315918494|ref|ZP_07914734.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313692369|gb|EFS29204.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 344

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     +I +IK ENP+ + +E   + R M   A   EI + 
Sbjct: 204 MVGTSDVIRLINRDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+   + E Y +++AN R   IGL P++  +T+NP+  +    D + +   
Sbjct: 261 EHIIGNRVLGITTETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNV 320

Query: 117 -KNFFETRVTEYQQGAGLK-WD 136
             NFFE  VT Y   + +  WD
Sbjct: 321 KSNFFEGTVTSYNMSSSIDGWD 342


>gi|291244313|ref|XP_002742041.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 463

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 9/128 (7%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + +       HL  K  +++ R ++ +A  +E  + +E
Sbjct: 327 GLTFSNELISRDEGLHCDFACLIFS-------HLTYKPSKERIRNIITQAVDIEKEFWNE 379

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P G +G+N      Y++F+A+R   ++  + ++ + ENPF +M E I L+ + NFFE 
Sbjct: 380 ALPVGLIGMNVTLMNYYVEFVADRLLLELNCDKVY-HRENPFDFM-ENISLEGKTNFFEK 437

Query: 123 RVTEYQQG 130
           RV EYQ+ 
Sbjct: 438 RVGEYQKA 445


>gi|255079598|ref|XP_002503379.1| predicted protein [Micromonas sp. RCC299]
 gi|226518645|gb|ACO64637.1| predicted protein [Micromonas sp. RCC299]
          Length = 335

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + I         K  +   R ++ EA  +E  + 
Sbjct: 196 MPGLTFSNELISRDEGLHRDFACLLYSYIN-------KKPNESVVRQIVKEAVEIEKEFV 248

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+NA    +Y++F+A+    Q+G+   +    NPF WM E+I L+ + NFF
Sbjct: 249 CDALPCALVGMNADLMSEYIEFVADHLLGQLGMSKEYN-AANPFDWM-ELISLQGKTNFF 306

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 307 EKRVGEYQKSG 317


>gi|289620013|emb|CBI53457.1| unnamed protein product [Sordaria macrospora]
          Length = 410

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQLIQDIIVDAVRIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFF
Sbjct: 313 TEALPCALLGMNADLMKQYIEFVADRLLVALGNEKVYRST-NPFDFM-ENISLGGKTNFF 370

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 371 EKRVADYQKAG 381


>gi|145349720|ref|XP_001419276.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579507|gb|ABO97569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 329

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +         K  ++  R ++ EA  +E  + 
Sbjct: 189 MPGLTFSNELISRDEGLHRDFACLLFSMLN-------NKPSEETIRKIVTEAVEIEKEFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   VG+NA     Y++++A+     +GL   +  T NPF WM E+I L+ + NFF
Sbjct: 242 CDSLPCALVGMNAGMMSDYIEYVADHLFCSLGLAKEYN-TTNPFDWM-ELISLQGKTNFF 299

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 300 EKRVGEYQKAG 310


>gi|19881429|ref|NP_612246.1| putative ribonucleotide reductase small subunit [Infectious spleen
           and kidney necrosis virus]
 gi|19773634|gb|AAL98748.1|AF371960_24 putative ribonucleotide reductase small subunit [infectious spleen
           and kidney necrosis virus]
          Length = 312

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   +  Q+         K  Q  +  ++ +A  +E A+ 
Sbjct: 176 MPGLAFSNELISRDEGLHCDFACMLFRQMA-------NKPCQDDAHQIISDAVDIETAFF 228

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+N+ S   Y+QF+A+R    +G   ++    NPF +M   I ++ + NFF
Sbjct: 229 QEALKTPLLGMNSDSMRLYIQFVADRLLDALGYAKMYN-VANPFDFMDN-ISIEGKTNFF 286

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 287 ERRVSEYQR 295


>gi|1710399|sp|P50649|RIR2_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|349790|gb|AAA29754.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 322

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 11/131 (8%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI--AYA 60
           G+    + I RDE LH +F   + + +  + P       +Q  + ++ EA  +E+  ++ 
Sbjct: 185 GLTFSNELISRDEGLHTDFNCLIYSLLDNKLP-------EQMVQNIVKEAGGVEVEKSFI 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFF
Sbjct: 238 CESLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWM-DLISLQGKTNFF 295

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 296 EKRVADYQKSG 306


>gi|269105083|ref|ZP_06157778.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268160718|gb|EEZ39216.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 310

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 14/132 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG---IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI 57
           + G+A     I RDE LH +F       + Q K+          QQ+   +  EA  +E 
Sbjct: 178 LAGLAASNDLIARDEGLHFSFSALLFKTLGQGKVT---------QQEFEEICREAVSIEK 228

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
            +  E +P   +G+NA    QY++  A+      G +P+F Y +NPF +M  ++D++ + 
Sbjct: 229 EFVTEALPVDLIGMNAELMCQYIEHTADVIAGLFGFDPIF-YAKNPFDYM-RLLDMEGKT 286

Query: 118 NFFETRVTEYQQ 129
           NFFE RVTEY++
Sbjct: 287 NFFEKRVTEYKR 298


>gi|256421019|ref|YP_003121672.1| ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
 gi|256035927|gb|ACU59471.1| Ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
          Length = 323

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F   +   ++   P       +++  T++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGLHCEFACLLYGMLENRLP-------EEQVHTIIRDAVAIEKEFI 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++F+A+R   ++G   +F  T NPF +M E+I L+ + NFF
Sbjct: 239 TDALPVALIGMNSKLMSEYIEFVADRWLSELGYTKIFN-TANPFDFM-EMISLQGKTNFF 296

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 297 EKRVGDYQKAG 307


>gi|158286793|ref|XP_308927.4| AGAP006818-PA [Anopheles gambiae str. PEST]
 gi|157020637|gb|EAA04227.4| AGAP006818-PA [Anopheles gambiae str. PEST]
          Length = 400

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++   ++ +A L+E  + 
Sbjct: 263 MPGLTFSNELISRDEGLHCDFACLMFK-------YLVQKPSKERVTEIIRDAVLIEQEFL 315

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G E ++ +T+NPF +M E I L+ + NFF
Sbjct: 316 TKALPVDMLGMNCDLMSQYIEFVADRLLLELGCEKIY-HTKNPFSFM-EFISLEGKTNFF 373

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 374 EKKVGEYQK 382


>gi|260061082|ref|YP_003194162.1| putative ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
 gi|88785214|gb|EAR16383.1| probable ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
          Length = 328

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 72/131 (54%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++ +       + N HL  K  +++   ++  A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGMHCDYAV------HLHNNHLVNKVPKERITQIITNALDIEREFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++  E ++  T NPF +M ++I L+ + NFF
Sbjct: 241 TESLPVSLIGMNAKLMTQYLEFVTDRLLVELECEKVYNST-NPFDFM-DMISLQGKTNFF 298

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+  
Sbjct: 299 EKRVSEYQKAG 309


>gi|221120499|ref|XP_002159812.1| PREDICTED: similar to hCG23833 [Hydra magnipapillata]
          Length = 387

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F         +   H+  K  +++ + ++ +A  +EI +  E
Sbjct: 245 GVTFSNELISRDEGLHCDFAC-------LMYKHIVNKPSEERVKQIIRDAVAIEIEFLTE 297

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N    + Y++F A+R  + +G    +   ENPF +M E I L ++ NFFE+
Sbjct: 298 SLPCDLLGMNKSLMKTYIEFCADRLINALGYSKEWN-VENPFDFM-ENISLARKANFFES 355

Query: 123 RVTEYQQGA 131
           RV++YQ+  
Sbjct: 356 RVSDYQKAG 364


>gi|18859327|ref|NP_571525.1| ribonucleoside-diphosphate reductase subunit M2 [Danio rerio]
 gi|292624782|ref|XP_002665783.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Danio rerio]
 gi|3914657|sp|P79733|RIR2_DANRE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase protein R2 class
           I; AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1695831|gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio]
 gi|27881838|gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|56207929|emb|CAI21240.1| ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|182889152|gb|AAI64707.1| Rrm2 protein [Danio rerio]
          Length = 386

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  ++  + ++  A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFK-------HLINKPSEETVKKIIMNAVEIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    +QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFF
Sbjct: 302 TDALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFF 359

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 360 EKRVGEYQR 368


>gi|156058956|ref|XP_001595401.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980]
 gi|154701277|gb|EDO01016.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 407

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q  + ++ EA  +E  + 
Sbjct: 254 MAGLTFSNELISRDEGLHTDFACLLFS-------HLKHRPSKQAVQDVITEAVEIEQEFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G + ++K + NPF +M E I L  + NFF
Sbjct: 307 TEALPCALLGMNSTLMKQYIEFVADRLLVTLGNDKVYK-SANPFDFM-ENISLAGKTNFF 364

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 365 EKRVGDYQKAG 375


>gi|91081999|ref|XP_969259.1| PREDICTED: similar to AGAP006818-PA [Tribolium castaneum]
 gi|270007377|gb|EFA03825.1| hypothetical protein TcasGA2_TC013940 [Tribolium castaneum]
          Length = 374

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  +++ ++++ +A  +E  + 
Sbjct: 238 MPGLTFSNELISRDEGLHCDFACLMFS-------HLVQKPSKERIQSIIQDAVKIEKEFL 290

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++G E ++  ++NPF +M+ +I  + + NFF
Sbjct: 291 TEALPVSMIGMNCALMCQYIEFVADRLLGELGCEKIYN-SQNPFDFMT-IISNEGKTNFF 348

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 349 EKKVGEYQKSG 359


>gi|17551968|ref|NP_497821.1| RiboNucleotide Reductase family member (rnr-2) [Caenorhabditis
           elegans]
 gi|1172941|sp|P42170|RIR2_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3873950|emb|CAA84688.1| C. elegans protein C03C10.3, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 381

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + ++++        K  QQ+   ++ +A  +E  + 
Sbjct: 244 MPGLTHSNELISRDEGLHRDFACLLYSKLQ-------KKLTQQRIYDIIKDAVAIEQEFL 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+    ++G + L+K ++NPF +M E I +  + NFF
Sbjct: 297 TEALPVDMIGMNCRLMSQYIEFVADHLLVELGCDKLYK-SKNPFDFM-ENISIDGKTNFF 354

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 355 EKRVSEYQR 363


>gi|50237508|gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus]
          Length = 312

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   +  Q+         K  Q  +  ++ +A  +E A+ 
Sbjct: 176 MPGLAFSNELISRDEGLHCDFACMLFRQMA-------NKPCQDDAHEIISDAVDIETAFF 228

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+N+ S + Y+QF+A+R    +G   ++    NPF +M   I ++ + NFF
Sbjct: 229 REALKTPLLGMNSDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMDN-ISIEGKTNFF 286

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 287 ERRVSEYQR 295


>gi|62421216|gb|AAX82336.1| ribonucleotide reductase small chain [Orange-spotted grouper
           iridovirus]
          Length = 312

 Score = 70.1 bits (170), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   +  Q+         K  Q  +  ++ +A  +E A+ 
Sbjct: 176 MPGLAFSNELISRDEGLHCDFACMLFRQMA-------NKPCQDDAHEIISDAVDIETAFF 228

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+N+ S + Y+QF+A+R    +G   ++    NPF +M   I ++ + NFF
Sbjct: 229 REALKTPLLGMNSDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMDN-ISIEGKTNFF 286

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 287 ERRVSEYQR 295


>gi|148230557|ref|NP_001080772.1| ribonucleotide reductase M2 polypeptide [Xenopus laevis]
 gi|28839018|gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis]
          Length = 386

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++   ++  A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFR-------HLVHKPSEERVVQLITNAVQIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK + NPF +M E I L+ + NFF
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFNKVFKAS-NPFDFM-ENISLEGKTNFF 359

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 360 EKRVGEYQK 368


>gi|319953269|ref|YP_004164536.1| ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
 gi|319421929|gb|ADV49038.1| Ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
          Length = 326

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 75/136 (55%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F +       + N H+  +  +++   +L +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGMHCDFAV------HLHNKHIINQVPKERITEILVDALNIEREFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+ +R   ++  + ++  T NPF +M ++I ++ + NFF
Sbjct: 240 TESLPASLIGMNSKLMTQYLEFVTDRLLVELECDKVYNST-NPFDFM-DMIGMEGKTNFF 297

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV+EYQ+   L  D
Sbjct: 298 EKRVSEYQKAGVLNSD 313


>gi|237749822|ref|ZP_04580302.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
 gi|229374572|gb|EEO24963.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
          Length = 351

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 2/131 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   AE  ++I RDE  HL     +I   + E P L+T+  Q +   M  +A  LE ++ 
Sbjct: 214 MQNSAEMIRFIQRDEITHLTIFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESSWG 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL A    QY++++A++R   +   P+   T+NP  W+ E ++   ++ NF
Sbjct: 274 EYITQGQILGLTAKIIRQYIEYLADKRLKAVDY-PILYNTQNPIQWVDEQVNFNNQRTNF 332

Query: 120 FETRVTEYQQG 130
           FE +V  Y +G
Sbjct: 333 FEAKVRNYTRG 343


>gi|167462363|ref|ZP_02327452.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
          Length = 343

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G     ++I RDE +H+     +  ++  ENP L  +E  +  R    +A  LEIA++
Sbjct: 203 MLGTNTMIRFINRDEEIHVRLFTQIFRELIAENPELDNEETHEFVRQTFRKAAELEIAWS 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEK 117
              +   F G+ +   ++Y++F+AN+R +++G+E P   +  N   W+   E  D  K  
Sbjct: 263 EYIIGDRFDGVTSRDLDKYVRFMANKRVNELGIERPFEGHRRNNLRWIKAYEENDAGK-T 321

Query: 118 NFFETRVTEY 127
           +FFE+RVT+Y
Sbjct: 322 DFFESRVTQY 331


>gi|171687074|ref|XP_001908478.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943498|emb|CAP69151.1| unnamed protein product [Podospora anserina S mat+]
          Length = 409

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q    ++ +A  +E  + 
Sbjct: 259 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQLVEDIIRDAVTIEQEFL 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G + +++ T NPF +M E I L  + NFF
Sbjct: 312 TEALPCALLGMNSNLMKQYIEFVADRLLVALGNDKIYRST-NPFDFM-ENISLGGKTNFF 369

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 370 EKRVGEYQKAG 380


>gi|12085003|ref|NP_073405.1| 20L protein [Yaba-like disease virus]
 gi|56404692|sp|Q9DHU2|RIR2_YLDV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|12056179|emb|CAC21258.1| 20L protein [Yaba-like disease virus]
          Length = 325

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         I   HL         R ++ EA  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFAC-------IMFKHLLNPPLNSVVRDIIIEAVNIEKNFL 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G +  +  ++NPF +M E I L+ + NFF
Sbjct: 241 TEAIPVKLIGMNCDLMKQYIEFVADRLLLELGCDKYY-CSKNPFDFM-ENISLEGKTNFF 298

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 299 EKRVSEYQK 307


>gi|297530897|ref|YP_003672172.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
 gi|297254149|gb|ADI27595.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
          Length = 346

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++    +  ++  E P   T E     R    +A  LEI +A
Sbjct: 206 MVATSTMINYINRDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWA 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEK 117
            E +     G++    E Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  
Sbjct: 266 GEIIGNDIDGIDLADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-S 324

Query: 118 NFFETRVTEYQQ 129
           +FFE +  +Y +
Sbjct: 325 DFFEQKPRQYTK 336


>gi|261839822|gb|ACX99587.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 52]
          Length = 341

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|261419130|ref|YP_003252812.1| ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|319765947|ref|YP_004131448.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
 gi|261375587|gb|ACX78330.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|317110813|gb|ADU93305.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
          Length = 346

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++    +  ++  E P   T E     R    +A  LEI +A
Sbjct: 206 MVATSTMINYINRDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWA 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEK 117
            E +     G++    E Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  
Sbjct: 266 GEIIGNDIDGIDLADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-S 324

Query: 118 NFFETRVTEYQQ 129
           +FFE +  +Y +
Sbjct: 325 DFFEQKPRQYTK 336


>gi|298207002|ref|YP_003715181.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
 gi|83849636|gb|EAP87504.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
          Length = 325

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 74/136 (54%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F +       + N HL  K  +++ R ++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGMHCDFAV------HLHNKHLVNKVSKERIREIIVDALNIEREFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+ +R   ++  E  +  T NPF +M ++I L+ + NFF
Sbjct: 240 TESLPASLIGMNSNLMTQYLEFVTDRLLLELECEKEYN-TANPFDFM-DMISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV +YQ+   +  D
Sbjct: 298 EKRVGDYQKAGVMDQD 313


>gi|67585619|ref|XP_665115.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis TU502]
 gi|54655552|gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis]
          Length = 296

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K + P         + + ++ EA  +E  + 
Sbjct: 159 MPGLTFSNELISRDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFL 211

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R    + +  ++  + NPF WM ++I L+ + NFF
Sbjct: 212 CDSLPVDLIGMNSRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWM-DLISLQGKTNFF 269

Query: 121 ETRVTEYQQGA 131
           E RV EYQ   
Sbjct: 270 EKRVGEYQMAG 280


>gi|85109237|ref|XP_962820.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
 gi|30316285|sp|Q9C167|RIR2_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|16273691|gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa]
 gi|28924456|gb|EAA33584.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
          Length = 410

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQLIQEIIVDAVRIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFF
Sbjct: 313 TEALPCALLGMNADLMKQYIEFVADRLLVALGNEKIYRST-NPFDFM-ENISLGGKTNFF 370

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 371 EKRVGDYQKAG 381


>gi|325286576|ref|YP_004262366.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
 gi|324322030|gb|ADY29495.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
          Length = 328

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 72/131 (54%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++ +       + N HL  K  +++   +L +A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGMHCDYAV------HLHNHHLINKVPKERITEILVDALDIEREFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+ +R   ++  + ++  T NPF +M ++I L+ + NFF
Sbjct: 241 TESLPVSLIGMNSKLMTQYLEFVTDRLLVELNCDKVYNST-NPFDFM-DMISLQGKTNFF 298

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 299 EKRVAEYQKSG 309


>gi|195119943|ref|XP_002004488.1| GI19586 [Drosophila mojavensis]
 gi|193909556|gb|EDW08423.1| GI19586 [Drosophila mojavensis]
          Length = 393

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVMMFR-------HLVQRPSRERIIEIISDAVTIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCALMSQYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 367 EKKVGEYQR 375


>gi|108563454|ref|YP_627770.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPAG1]
 gi|107837227|gb|ABF85096.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori HPAG1]
          Length = 341

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|283955349|ref|ZP_06372848.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283793109|gb|EFC31879.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 340

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE++VT Y +G+
Sbjct: 323 FESKVTNYSKGS 334


>gi|15644992|ref|NP_207162.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 26695]
 gi|2500210|sp|P55983|RIR2_HELPY RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2313466|gb|AAD07432.1| ribonucleoside diphosphate reductase, beta subunit (nrdB)
           [Helicobacter pylori 26695]
          Length = 341

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|188996383|ref|YP_001930634.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931450|gb|ACD66080.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 326

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 3/129 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAY 59
           M  +    + I+ DESLHL  GI+ I  +  ENP +    +F +  R  + +A  LE+ Y
Sbjct: 196 MKNVVSGVELILIDESLHLQNGIEAILTMVEENPEIVDDYQFVENIRQSIIDAVELELNY 255

Query: 60  AHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                    + G++    E+YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  N
Sbjct: 256 LKTKFGGTTIFGVSYGELERYMKYIADRRLIELGFDPQFGIDQNPLKFLQKE-DVKKLTN 314

Query: 119 FFETRVTEY 127
           FFE   TEY
Sbjct: 315 FFEVSSTEY 323


>gi|86149605|ref|ZP_01067835.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|86151167|ref|ZP_01069382.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|86153704|ref|ZP_01071907.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|88597173|ref|ZP_01100408.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|121613260|ref|YP_999944.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|157414529|ref|YP_001481785.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|167004901|ref|ZP_02270659.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|218561895|ref|YP_002343674.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|283955655|ref|ZP_06373148.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|315123818|ref|YP_004065822.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|85839873|gb|EAQ57132.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|85841514|gb|EAQ58761.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85842665|gb|EAQ59877.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|87250215|gb|EAQ73173.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|88190234|gb|EAQ94208.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112359601|emb|CAL34386.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|157385493|gb|ABV51808.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|283792880|gb|EFC31656.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|284925507|gb|ADC27859.1| ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni IA3902]
 gi|307747171|gb|ADN90441.1| Ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315017540|gb|ADT65633.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|315928159|gb|EFV07477.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni DFVF1099]
 gi|315932030|gb|EFV10983.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 340

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE++VT Y +G+
Sbjct: 323 FESKVTNYSKGS 334


>gi|207092116|ref|ZP_03239903.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPKX_438_AG0C1]
          Length = 341

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|205356539|ref|ZP_03223302.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205345544|gb|EDZ32184.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 340

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE++VT Y +G+
Sbjct: 323 FESKVTNYSKGS 334


>gi|57237291|ref|YP_178304.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni RM1221]
 gi|148926379|ref|ZP_01810063.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|57166095|gb|AAW34874.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni RM1221]
 gi|145844771|gb|EDK21876.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|315057661|gb|ADT71990.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 340

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE++VT Y +G+
Sbjct: 323 FESKVTNYSKGS 334


>gi|317182342|dbj|BAJ60126.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F57]
          Length = 341

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|38229183|ref|NP_938276.1| 20L [Yaba monkey tumor virus]
 gi|38000454|gb|AAR07377.1| 20L [Yaba monkey tumor virus]
          Length = 325

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +   NP L     +   R ++ EA  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACMMFKHLS--NPPL-----ENVIRDIVIEAVDIEKNFL 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E MP   +G+N    +QY++F+A+R   ++G +  +  ++NPF +M E I L+ + NFF
Sbjct: 241 TEAMPVKLIGMNCDLMKQYIEFVADRLLLELGCKKYY-CSKNPFDFM-ENISLEGKTNFF 298

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 299 EKRVSEYQK 307


>gi|86132508|ref|ZP_01051102.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
 gi|85817069|gb|EAQ38253.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
          Length = 328

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F +       + N HL  K  +++   ++  A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGVHCDFAV------HLHNHHLVNKVPKERITEIIVNALDIEREFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++++ +R   ++  E ++  T NPF +M ++I L+ + NFF
Sbjct: 240 TESLPVSLIGMNSNLMTQYLEYVTDRLLTELDCEKVYN-TANPFDFM-DMISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   +K
Sbjct: 298 EKRVGEYQKAGVVK 311


>gi|62637405|ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus W-848-83]
 gi|115503265|gb|ABI99183.1| ribonucleotide reductase small subunit [Deerpox virus W-848-83]
          Length = 321

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  Q+ +  P         +   ++ EA  +E ++ 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLMFKQL-LYPPS------TSRIINIIVEAVSIEKSFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G   +FK +ENPF +M E I L+ + NFF
Sbjct: 237 TKALPVKLIGMNCELMCQYIEFVADRLLSELGCNKIFK-SENPFDFM-ESISLEGKTNFF 294

Query: 121 ETRVTEYQQ 129
           E RV++YQ+
Sbjct: 295 EKRVSDYQK 303


>gi|72008642|ref|XP_780110.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           isoform 1 [Strongylocentrotus purpuratus]
 gi|115928579|ref|XP_001179668.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           [Strongylocentrotus purpuratus]
          Length = 412

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  ++  + ++ EA  +E  + 
Sbjct: 270 MPGLTFSNELISRDEGLHCDFACLMFK-------HLNNKPDEEHVQGIIKEAVAIEQEFL 322

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA   ++Y++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 323 TDALPCSLIGMNAVLMKRYIEFVADRLLVELGCGKIWK-VENPFDFM-ENISLEGKTNFF 380

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 381 EKRVGEYQK 389


>gi|301097698|ref|XP_002897943.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262106388|gb|EEY64440.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 360

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 76/135 (56%), Gaps = 10/135 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE +H +F   + +++  + P       + +   ++ +A  +E  + 
Sbjct: 223 MPGLSFSNEMISRDEGMHTDFACLMYSKLVNKLP-------ESRVHEIIRDAVAIEHEFV 275

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R  + +G+  ++   +NPF WM ++I L+ + NFF
Sbjct: 276 CDSLPVELIGMNSALMCQYIEFVADRLLYSLGVSKIYN-VKNPFDWM-DMISLQGKTNFF 333

Query: 121 ETRVTEYQQ-GAGLK 134
           E RV EY + G G+ 
Sbjct: 334 EKRVGEYSKAGVGVS 348


>gi|332185556|ref|ZP_08387304.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
 gi|332014534|gb|EGI56591.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
          Length = 351

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   L TK  +            LE  + 
Sbjct: 178 MKGMGQIVTWSVRDESLHCEGIIQLFHAFTKERQCL-TKAVKDDIADQCQTTVRLEDNFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+ A   ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NF
Sbjct: 237 DLAFEMGPVNGMTAKDIKKYIRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGA 131
           FETR TEY + A
Sbjct: 297 FETRATEYSKAA 308


>gi|323143005|ref|ZP_08077711.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
 gi|322417199|gb|EFY07827.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
          Length = 331

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 70/136 (51%), Gaps = 10/136 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH-----EATLL 55
           M G+ +   + + DE+LH    I +  +   +NP LW  + +    ++       E + +
Sbjct: 188 MRGMGQIIAWSINDETLHTESMIKLFREYIEQNPQLWNDDLKSTIYSIAEKMVELEDSFI 247

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           ++A+    M K    L     ++Y++FIA+RR   +G++ +F   +NP PW+  ++ +  
Sbjct: 248 DLAFGVNQMQK----LAKEDVKKYIRFIADRRLSAMGMKAIFNEKKNPLPWVDAMLGV-T 302

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE RV +Y +GA
Sbjct: 303 HTNFFENRVVDYAKGA 318


>gi|317009697|gb|ADU80277.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori India7]
          Length = 341

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|208434985|ref|YP_002266651.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
 gi|208432914|gb|ACI27785.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
          Length = 341

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|302783485|ref|XP_002973515.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
 gi|302787555|ref|XP_002975547.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300156548|gb|EFJ23176.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300158553|gb|EFJ25175.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
          Length = 347

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + + +       K  +++ + ++ +A  +E  + 
Sbjct: 205 MPGLTFSNELISRDEGLHCDFACLLYSLLNV-------KLDEKRVKEIVSDAVEIERQFV 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    VG+NA    QY+ F+A+R    +G   LF    NPF WM ++I L+ + NFF
Sbjct: 258 CEALSCDLVGMNARLMSQYIDFVADRLMVVLGYNKLFNAI-NPFDWM-DLISLQGKTNFF 315

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 316 EKRVGEYQKAS 326


>gi|294877483|ref|XP_002768004.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239870142|gb|EER00722.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 247

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 69/124 (55%), Gaps = 8/124 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +FG  + N +K      +T+  +++   ++  A  +E  + 
Sbjct: 108 MPGLTFSNELISRDEGLHTDFGCLLYNMLK------FTRLPEERVEDIVRSAVNVEREFI 161

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P G +G+NA    +Y++F+A+R    +G   ++  + NPF WM+ +I L+ + NFF
Sbjct: 162 TDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIYN-SANPFDWMT-MISLQGKTNFF 219

Query: 121 ETRV 124
           E RV
Sbjct: 220 EKRV 223


>gi|114568952|ref|YP_755632.1| ribonucleotide-diphosphate reductase subunit beta [Maricaulis maris
           MCS10]
 gi|114339414|gb|ABI64694.1| Ribonucleoside-diphosphate reductase [Maricaulis maris MCS10]
          Length = 345

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   L T+E +            LE  + 
Sbjct: 186 MKGMGQIVTWSIRDESLHCEGMIKLFHAFAEETGAL-TQEVKDDITECCRTVVGLEDKFI 244

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     + Y+++IA+ R  Q+GL  ++   E+P PW+SE+++  +  NF
Sbjct: 245 DLAFEAGDVEGMTPDDIKTYIRYIADWRLGQLGLPKIYGVKEHPLPWLSEILNGVEHANF 304

Query: 120 FETRVTEYQQGA 131
           FE R TEY +GA
Sbjct: 305 FEARATEYSKGA 316


>gi|294013210|ref|YP_003546670.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
 gi|292676540|dbj|BAI98058.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
          Length = 351

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH   GI  +    ++     T   +     M  +   +E A+ 
Sbjct: 178 MKGMGQIVSWSVRDETLHCE-GIVRLFHAFVKERDCLTASVKDDIMDMCQKTVRIEDAFV 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NF
Sbjct: 237 DLVFEMGPVPGMTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGA 131
           FETR TEY + A
Sbjct: 297 FETRATEYSKAA 308


>gi|211956300|ref|YP_002302368.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
 gi|115503095|gb|ABI99013.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
          Length = 321

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  Q+ +  P+        +   ++ EA  +E ++ 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLMFKQL-LHPPN------PSRIINIIVEAVSIEKSFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++F+A+R   ++G   +FK +ENPF +M E I L+ + NFF
Sbjct: 237 TTALPVKLIGMNCELMCQYIEFVADRLLSELGCTKIFK-SENPFDFM-ESISLEGKTNFF 294

Query: 121 ETRVTEYQQ 129
           E RV++YQ+
Sbjct: 295 EKRVSDYQK 303


>gi|217032591|ref|ZP_03438080.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298735909|ref|YP_003728434.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           pylori B8]
 gi|216945727|gb|EEC24352.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298355098|emb|CBI65970.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           pylori B8]
          Length = 341

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|66475262|ref|XP_627447.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
 gi|9652154|gb|AAF91416.1|AF275635_1 ribonucleotide reductase R2 subunit [Cryptosporidium parvum]
 gi|46228920|gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
          Length = 352

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K + P         + + ++ EA  +E  + 
Sbjct: 215 MPGLTFSNELISRDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFL 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R    + +  ++  + NPF WM ++I L+ + NFF
Sbjct: 268 CDSLPVDLIGMNSRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWM-DLISLQGKTNFF 325

Query: 121 ETRVTEYQQGA 131
           E RV EYQ   
Sbjct: 326 EKRVGEYQMAG 336


>gi|323450429|gb|EGB06310.1| hypothetical protein AURANDRAFT_65685 [Aureococcus anophagefferens]
          Length = 349

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 73/134 (54%), Gaps = 10/134 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE +H +F   + ++++ + P        +    ++ +A  +E  + 
Sbjct: 212 MPGLSFSNELISRDEGMHCDFACLLYSKLRNKLP-------VETINALIGDAVTIEKEFV 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N+ +  QY++F A+R    +G   L++ T NPF WM E+I L+ + NFF
Sbjct: 265 VSALPVELIGMNSRTMCQYIEFCADRLLLALGCPKLYEAT-NPFDWM-ELISLQGKTNFF 322

Query: 121 ETRVTEY-QQGAGL 133
           E RV EY + G G+
Sbjct: 323 EKRVGEYAKSGVGV 336


>gi|145537171|ref|XP_001454302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422057|emb|CAK86905.1| unnamed protein product [Paramecium tetraurelia]
          Length = 507

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +   H+  K   Q+   ++  A  +E  + 
Sbjct: 370 MPGLTFSNELISRDEGLHTDFAC-------LLYKHMINKLSIQRVHEIISSAVEIEKEFI 422

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G   ++  ++NPF WM ++I L+ + NFF
Sbjct: 423 SEALPVELIGMNSNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWM-DMISLQGKTNFF 480

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 481 ERRVGDYQKAG 491


>gi|294501621|ref|YP_003565321.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium QM B1551]
 gi|295706969|ref|YP_003600044.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium DSM 319]
 gi|294351558|gb|ADE71887.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium QM B1551]
 gi|294804628|gb|ADF41694.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium DSM 319]
          Length = 347

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 14/140 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE LH+     +  ++  ENP   T+E +        EA  LEI +A
Sbjct: 205 MVATSTMINYINRDEQLHVGLFEKIFKEVLNENPAYRTEELETFVVETFQEAARLEIEWA 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGL-------EPLFKYTENPFPWM--SEVI 111
              + + F G+     +QY++++AN+RC+Q+G         P+    ENP  W+   + +
Sbjct: 265 ESVIGEKFDGITMKELQQYIEYMANKRCNQLGFGRAAFPEAPI----ENPLRWIIAYQEV 320

Query: 112 DLKKEKNFFETRVTEYQQGA 131
           DL K  +FFE +  +Y + +
Sbjct: 321 DLGK-TDFFEQKSRQYTKAS 339


>gi|195333568|ref|XP_002033462.1| GM20395 [Drosophila sechellia]
 gi|195582581|ref|XP_002081105.1| GD25870 [Drosophila simulans]
 gi|194125432|gb|EDW47475.1| GM20395 [Drosophila sechellia]
 gi|194193114|gb|EDX06690.1| GD25870 [Drosophila simulans]
          Length = 393

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 367 EKKVAEYQR 375


>gi|163781846|ref|ZP_02176846.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883066|gb|EDP76570.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
          Length = 350

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    +Q +YI RDE  H+    ++I  ++ E P L++ E ++        A   EI + 
Sbjct: 214 MTNTVQQIKYINRDELTHVTLFRNMILNLQKEQPELFSPEIKKWIAEYFRYAIDQEIKWG 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
                   +G+N    ++Y++++ N R  QIGLEPL+ + TENP  W+ +   +   K +
Sbjct: 274 QYVTQDQILGINNQLIDRYIKYLGNLRITQIGLEPLYPEITENPMKWIDDFRKINNTKTD 333

Query: 119 FFETRVTEYQQGAGLKW 135
           FF+ +   Y +   LKW
Sbjct: 334 FFQRKPQTYAKANELKW 350


>gi|328771482|gb|EGF81522.1| hypothetical protein BATDEDRAFT_16297 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 336

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +         K      + ++HEA  +E  ++
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLFTLLN-------NKPTDSVIQQIIHEAVTIEQEFS 250

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKNF 119
            E++P   +G+NA   +QY++F+A+R   ++G+    KY   NPF +M ++I L+ + NF
Sbjct: 251 TESLPVALIGMNANLMKQYIEFVADRLFIELGMPK--KYGVGNPFDFM-DMISLQGKTNF 307

Query: 120 FETRVTEYQQGA 131
           FE RV EYQ+  
Sbjct: 308 FEKRVGEYQKSG 319


>gi|326437649|gb|EGD83219.1| ribonucleotide reductase M2 B [Salpingoeca sp. ATCC 50818]
          Length = 408

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  + I RDE LH +F   + + +  + P       +++   ++ +A  +E  + 
Sbjct: 268 MPGLTQSNELISRDEGLHCDFACLMFSMLHKKPP-------KERVIGIIMDAVEIEQEFL 320

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+    +Y++F+++R    +G + ++  T NPFP+M E I ++ + NFF
Sbjct: 321 TEALPVSLLGMNSTLMREYIEFVSDRLLVSLGYDKVYNAT-NPFPFM-ENISIEGKTNFF 378

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+  
Sbjct: 379 ERRVSEYQKSG 389


>gi|217034470|ref|ZP_03439882.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|216943072|gb|EEC22549.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|317177841|dbj|BAJ55630.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F16]
          Length = 341

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIESLWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 324 FEARVSNYAKGS 335


>gi|110636874|ref|YP_677081.1| ribonucleoside-diphosphate reductase 1 subunit beta [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110279555|gb|ABG57741.1| ribonucleoside-diphosphate reductase 1, beta subunit [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 324

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   +  +      ++  K   ++   ++ EA  +E  + 
Sbjct: 186 MPGLSFSNELISRDEGLHCDFACLLYTK------YINNKLPAERVIQIILEAVEIEKEFV 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+NA   +QY++F+A+R    +G+   F  T NPF +M E+I L+ + NFF
Sbjct: 240 TDSLPVDLIGMNARLMQQYIEFVADRLLVALGVPKQFNAT-NPFDFM-EMISLQGKTNFF 297

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+  
Sbjct: 298 EKRVSEYQKSG 308


>gi|195401438|ref|XP_002059320.1| GJ18335 [Drosophila virilis]
 gi|194142326|gb|EDW58732.1| GJ18335 [Drosophila virilis]
          Length = 394

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQRPCRERIIEIISDAVTIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     +Y++F+A+R   ++G+  L+  T+NPF +M E+I L  + NFF
Sbjct: 310 TDALPVNLIGMNCALMSEYIEFVADRLLVELGVGKLYN-TKNPFTFM-EMISLDGKTNFF 367

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 368 EKKVGEYQR 376


>gi|328872436|gb|EGG20803.1| ribonucleotide reductase small subunit [Dictyostelium fasciculatum]
          Length = 335

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N++   N  L  K  +    +++ +A   E  + 
Sbjct: 189 MPGLTFSNELISRDEGLHCDFACLLYNKL---NNKLDVKTIE----SIIRDAVECEKEFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    +Y++F A+R    +G + ++  + NPF WM E+I L ++ NFF
Sbjct: 242 TDSLPVDLIGMNSREMSKYIEFCADRLLVSLGYKKIYN-SANPFDWM-EMISLMRKANFF 299

Query: 121 ETRVTEYQQGAGLK 134
           E +V+EY +    K
Sbjct: 300 EGKVSEYAKAGVAK 313


>gi|255530602|ref|YP_003090974.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
 gi|255343586|gb|ACU02912.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
          Length = 324

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE  H  F   +   +K        K  Q++   ++ +A  +E  + 
Sbjct: 185 MPGLTFSNELISRDEGSHCEFACLLYGMLK-------NKLSQEQVHGIIRDAVEIEKEFV 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R   ++G   ++  T NPF +M E+I L+ + NFF
Sbjct: 238 TDALPVALIGMNAKLMSQYIEFVADRWLQELGYSKIYNAT-NPFDFM-EMISLQGKTNFF 295

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   L
Sbjct: 296 EKRVGDYQKSGVL 308


>gi|195172750|ref|XP_002027159.1| GL20023 [Drosophila persimilis]
 gi|198459455|ref|XP_001361381.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
 gi|194112972|gb|EDW35015.1| GL20023 [Drosophila persimilis]
 gi|198136695|gb|EAL25959.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
          Length = 391

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + + +       HL  +  +++   ++ +A  +E  + 
Sbjct: 254 MPGLTFSNELISRDEGLHCDFAVLMYH-------HLVQRPKRERIIEIIRDAVEIEQEFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 307 TEALPVNLIGMNCVLMSQYIEFVADRLLGELGVGKIYN-TKNPFNFM-EMISLDGKTNFF 364

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 365 EKKVAEYQR 373


>gi|154296564|ref|XP_001548712.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
 gi|150843273|gb|EDN18466.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
          Length = 407

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q  + ++ EA  +E  + 
Sbjct: 254 MAGLTFSNELISRDEGLHTDFACLLFS-------HLKHRPSKQAVQDVITEAVEIEQEFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G +  +K + NPF +M E I L  + NFF
Sbjct: 307 TEALPCALLGMNSNLMKQYIEFVADRLLLSLGNDKYYK-SANPFDFM-ENISLAGKTNFF 364

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 365 EKRVGDYQKAG 375


>gi|307295356|ref|ZP_07575195.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
 gi|306878859|gb|EFN10078.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
          Length = 351

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH   GI  +    ++     T   +     M  +   +E A+ 
Sbjct: 178 MKGMGQIVSWSVRDETLHCE-GIIRLFHAFVKERDCLTASVKDDIMDMCQKTVRIEDAFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NF
Sbjct: 237 DLVFEMGPVPGMTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGA 131
           FETR TEY + A
Sbjct: 297 FETRATEYSKAA 308


>gi|157939640|ref|YP_001497012.1| ribonucleotide reductase [Tanapox virus]
 gi|146746356|gb|ABQ43492.1| ribonucleotide reductase [Tanapox virus]
 gi|146746512|gb|ABQ43647.1| ribonucleotide reductase [Tanapox virus]
          Length = 325

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         I   HL         R ++ EA  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFAC-------IMFKHLLNPPLNSVVRDIIIEAVNIEKNFL 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G    +  ++NPF +M E I L+ + NFF
Sbjct: 241 TEAIPVKLIGMNCDLMKQYIEFVADRLLLELGCNKYY-CSKNPFDFM-ENISLEGKTNFF 298

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 299 EKRVSEYQK 307


>gi|325953830|ref|YP_004237490.1| ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
 gi|323436448|gb|ADX66912.1| Ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
          Length = 323

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 10/132 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDV-INQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   + +N +K + P       ++  + ++ +A  +E  +
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLLYVNHLKNKLP-------EETVQKIIADAVEVEKEF 236

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             E +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M E+I L+ + NF
Sbjct: 237 VTEALPVRLIGMNAELMCQYIEFVADRLLDALGCKKVWNAT-NPFDFM-ELISLQGKTNF 294

Query: 120 FETRVTEYQQGA 131
           FE RV EYQ+  
Sbjct: 295 FERRVGEYQKSG 306


>gi|50311465|ref|XP_455757.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644893|emb|CAG98465.1| KLLA0F15103p [Kluyveromyces lactis]
          Length = 401

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   +   +K + NP +  K        ++ EA  +E  Y
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLFAHLKNKPNPEIVEK--------IITEAVEIEKRY 310

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             + +P   +G+NA    QY++F+A+R    +G +  F  T NPF +M E I L  + NF
Sbjct: 311 FMDALPVSLLGMNADLMNQYVEFVADRLLVALGNKKYFNVT-NPFDFM-ENISLAGKTNF 368

Query: 120 FETRVTEYQQGA 131
           FE RV++YQ+  
Sbjct: 369 FEKRVSDYQKAG 380


>gi|116191729|ref|XP_001221677.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
 gi|88181495|gb|EAQ88963.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
          Length = 409

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q    ++ +A  +E  + 
Sbjct: 259 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQIIEDIIVDAVRIEQEFL 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFF
Sbjct: 312 TEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYRST-NPFDFM-ENISLGGKTNFF 369

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 370 EKRVGEYQKAG 380


>gi|9633826|ref|NP_051904.1| gp015L [Rabbit fibroma virus]
 gi|6578545|gb|AAF17899.1|AF170722_17 gp015L [Rabbit fibroma virus]
          Length = 322

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 10/137 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     + ++  ++ EA ++E  + 
Sbjct: 186 MPGLTFSNELISRDEGLHCDFACLMFK-------HLNHTPSETRATDIIKEAVVIEQQFL 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G   +F  T NPF +M E I L+ + NFF
Sbjct: 239 TKALPVRLIGINCDLMCQYIEFVADRLVTELGYSKIFSAT-NPFDFM-ENISLEGKTNFF 296

Query: 121 ETRVTEYQQ-GAGLKWD 136
           E RV++YQ+ G   K D
Sbjct: 297 EKRVSDYQRMGVASKQD 313


>gi|4836362|gb|AAD30422.1|AF117061_1 ribonucleotide reductase R2 subunit [Aedes albopictus]
          Length = 398

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  Q++   ++ EA L+E  + 
Sbjct: 261 MPGLTFSNELISRDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFL 313

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F A+R   ++G++ ++  T+NPF +M E I L+ + NFF
Sbjct: 314 TKALPVDLLGMNCELMSQYIEFEADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFF 371

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 372 EKKVGEYQK 380


>gi|289449785|ref|YP_003474451.1| ribonucleoside-diphosphate reductase subunit beta [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289184332|gb|ADC90757.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
          Length = 400

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    ++++++++E P L++ E  ++ R M+ E    EIA+ 
Sbjct: 260 MPGSVQEIRYINRDENTHLWLFRNILSELQVERPDLFSAELVEEYRAMIKEGAEQEIAWG 319

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKK 115
           H  +     GL       Y+Q++AN R   +G    + Y +N        W+S+  D   
Sbjct: 320 HYVLGDDIPGLTRQMVTDYIQYLANLRAQNLGFA--YIYPDNHSEPASMSWISQYSDANM 377

Query: 116 EK-NFFETRVTEYQQGAGL 133
            K +FFE + T Y +   +
Sbjct: 378 VKTDFFEAKSTAYAKSTAM 396


>gi|224100309|ref|XP_002311826.1| predicted protein [Populus trichocarpa]
 gi|222851646|gb|EEE89193.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++    H W     QK   ++ EA  +E  + 
Sbjct: 201 MPGLTFSNELISRDEGLHCDFACLLYSLLQ-RQLH-W-----QKVYHIVGEAVEIETKFV 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA     Y++F+A+R    +G +  +   ENPF WM E I L+ + NFF
Sbjct: 254 CEALPCALIGMNATLMGDYIKFVADRLLVALGYQKKYN-VENPFDWM-EFISLQGKANFF 311

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 312 ERRVGDYQKAS 322


>gi|94495782|ref|ZP_01302361.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
 gi|94424474|gb|EAT09496.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
          Length = 350

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH   GI  +    ++     T   +     M  +   +E A+ 
Sbjct: 178 MKGMGQIVSWSVRDETLHCE-GIVRLFHAFVKERDCLTASVKDDIMDMCQKTVRIEDAFV 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NF
Sbjct: 237 DLVFEMGPVPGMTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGA 131
           FETR TEY + A
Sbjct: 297 FETRSTEYSKAA 308


>gi|18079279|ref|NP_525111.1| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|12644287|sp|P48592|RIR2_DROME RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10727628|gb|AAF58599.2| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|15292183|gb|AAK93360.1| LD41588p [Drosophila melanogaster]
 gi|220946286|gb|ACL85686.1| CG8975-PA [synthetic construct]
 gi|220955972|gb|ACL90529.1| RnrS-PA [synthetic construct]
          Length = 393

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 367 EKKVGEYQR 375


>gi|195485577|ref|XP_002091148.1| GE13485 [Drosophila yakuba]
 gi|194177249|gb|EDW90860.1| GE13485 [Drosophila yakuba]
          Length = 393

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 367 EKKVGEYQR 375


>gi|194883840|ref|XP_001976005.1| GG22616 [Drosophila erecta]
 gi|190659192|gb|EDV56405.1| GG22616 [Drosophila erecta]
          Length = 393

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +   ++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQRPKHERIIEIIRDAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 367 EKKVAEYQR 375


>gi|322510501|gb|ADX05815.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 1]
          Length = 324

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 79/128 (61%), Gaps = 9/128 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE+LH  F + + ++++        K  ++K R ++ EA ++E  + 
Sbjct: 189 MPGLTFSNELISRDEALHTEFAVHLFHKLE-------KKINKKKIREIIEEAVVIEKEFI 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++++A+R   Q+G E +++ T NPF +M E+I L+++ NFF
Sbjct: 242 VESLPCRLIGMNSDLMTQYIEYVADRLMIQLGCEEIYR-TNNPFDFM-ELISLEQKTNFF 299

Query: 121 ETRVTEYQ 128
           E+RV+EY 
Sbjct: 300 ESRVSEYS 307


>gi|68161126|gb|AAY86994.1| ribonucleotide reductase M2b [Ictalurus punctatus]
          Length = 192

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 9/126 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH NF   + +Q++        K    + + ++ +A  +E  + 
Sbjct: 76  MPGLTYSNELISRDEGLHCNFACLIYSQLQ-------KKPSADRVKDIITKAVRIEQEFL 128

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G+  +++  ENPF +M E I L+ + NFF
Sbjct: 129 TEALPVDLIGINSYLMKQYIEFVADRLLTDLGIPKVYE-AENPFDFM-EFISLEGKTNFF 186

Query: 121 ETRVTE 126
           E RV E
Sbjct: 187 EKRVAE 192


>gi|297818266|ref|XP_002877016.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322854|gb|EFH53275.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 329

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K +         +++ ++++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGLHCDFACLLYTLLKTKLS-------EERVKSIVCDAVEIEREFV 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFF
Sbjct: 239 CDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFF 296

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 297 EKRVGDYQKAS 307


>gi|87198296|ref|YP_495553.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87133977|gb|ABD24719.1| Ribonucleoside-diphosphate reductase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 351

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH   GI  +    ++     TK  ++       +   LE A+ 
Sbjct: 178 MKGMGQIVSWSVRDESLHCE-GITRLFHAFVKERGCLTKAVKEDIIDCCQKTVRLEDAFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                +G V G++A   ++Y+++IA+ R  Q+GL  ++   ++P PW++ +++  +  NF
Sbjct: 237 DLAFEQGPVPGMSAKEIKRYIRYIADWRLSQLGLPAIYMIEDHPLPWLAPLLNGVEHANF 296

Query: 120 FETRVTEYQQGA 131
           FETR TEY + A
Sbjct: 297 FETRATEYSKAA 308


>gi|225849393|ref|YP_002729557.1| ribonucleoside-diphosphate reductase subunit beta
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644764|gb|ACN99814.1| ribonucleoside-diphosphate reductase, beta subunit
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 326

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 3/129 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAY 59
           M  +    + I+ DESLHL  GI+ I  +  ENP +     F +  R  + +A  LE+ Y
Sbjct: 196 MKNVVAGVELILIDESLHLQNGIEAILTMVEENPEIVDDYNFVENIRQSIIDAVELELNY 255

Query: 60  AHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                    + G++    E+YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  N
Sbjct: 256 LKTKFGGTTIFGVSYNELERYMKYIADRRLVELGFDPQFGIDQNPLKFLQKE-DVKKLTN 314

Query: 119 FFETRVTEY 127
           FFE   TEY
Sbjct: 315 FFEVSSTEY 323


>gi|148912897|ref|YP_001293211.1| hypothetical protein GTPV_gp017 [Goatpox virus Pellor]
          Length = 321

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K    +          + +++EA  +E  + 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSN-------DIIKIIINEAVSIEKEFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++FIA+R   ++G + +F  T NPF +M E I L+ + NFF
Sbjct: 237 TNIIPVKLIGMNCDLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFF 294

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 295 EKRVSEYQK 303


>gi|15232077|ref|NP_189342.1| TSO2 (TSO meaning 'ugly' in Chinese); oxidoreductase/
           ribonucleoside-diphosphate reductase/ transition metal
           ion binding [Arabidopsis thaliana]
 gi|75273949|sp|Q9LSD0|RIR2C_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain C;
           AltName: Full=Ribonucleoside-diphosphate reductase TSO2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit C
 gi|9279629|dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|17380726|gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
 gi|21436297|gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
          Length = 332

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K +         +++ ++++ +A  +E  + 
Sbjct: 189 MPGLTFSNELISRDEGLHCDFACLLYTLLKTKLS-------EERVKSIVCDAVEIEREFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFF
Sbjct: 242 CDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFF 299

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 300 EKRVGDYQKAS 310


>gi|190896536|gb|ACE96781.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896560|gb|ACE96793.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896566|gb|ACE96796.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|190896528|gb|ACE96777.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|190896544|gb|ACE96785.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|327403795|ref|YP_004344633.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
 gi|327319303|gb|AEA43795.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
          Length = 324

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 73/131 (55%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   +  +      HL  +  +++ + ++ +A  +E  + 
Sbjct: 186 MPGLSFSNELISRDEGLHCDFACLLYTK------HLIHQLSKEQVQEIILDAVEIEKEFV 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R   ++G   +F  T NPF +M ++I ++ + NFF
Sbjct: 240 TDALPVKLIGMNADLMAQYIEFVADRLLTELGNPKVFN-TTNPFDFM-DMISIQGKTNFF 297

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 298 EKRVAEYQKSG 308


>gi|190896512|gb|ACE96769.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896530|gb|ACE96778.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|187607401|ref|NP_001119973.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus (Silurana)
           tropicalis]
 gi|165971068|gb|AAI58191.1| LOC100144925 protein [Xenopus (Silurana) tropicalis]
          Length = 346

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       +L  K  +++   ++  A  +E  + 
Sbjct: 209 MPGLTFSNELISRDEGLHTDFACLMFH-------YLVKKPTEERVTEIIVNAVRIEQEFL 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    + Y++F+A+R   ++G    FK  ENPF +M E I L+ + NFF
Sbjct: 262 TEALPVSLIGMNCTLMKTYIEFVADRLLVELGCSKAFK-AENPFDFM-ENISLEGKTNFF 319

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+ A
Sbjct: 320 EKRVSEYQRFA 330


>gi|308806626|ref|XP_003080624.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
 gi|116059085|emb|CAL54792.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
          Length = 241

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   ++ Q+    P       ++  R ++ EA  +E  + 
Sbjct: 101 MPGLTFSNELISRDEGLHRDFAC-LLYQMLNNKPD------EEVVRKIVTEAVEIEKEFV 153

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   VG+NA     Y++++A+     +G+ P    T NPF WM E+I L+ + NFF
Sbjct: 154 CDSLPCALVGMNAGMMSDYIEYVADHLFTSLGM-PKEYNTANPFDWM-ELISLQGKTNFF 211

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 212 EKRVGEYQKAG 222


>gi|190896524|gb|ACE96775.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896534|gb|ACE96780.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|313844096|ref|YP_004061759.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
 gi|312599481|gb|ADQ91503.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
          Length = 408

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 70/127 (55%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F +++   ++I       K   +   +++ EA  +E  + 
Sbjct: 275 MPGLCFSNELISRDEGLHQEFAVELFKLLRI-------KPTTETIHSIVKEAVEIEKGFI 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++++++R   QIG+ P++  ++NPF +M E I L  + NFF
Sbjct: 328 LDALPCALIGMNSEKMSEYIEYVSDRLLKQIGVPPIWN-SKNPFDFM-ENISLDGKTNFF 385

Query: 121 ETRVTEY 127
           E RV +Y
Sbjct: 386 EKRVGDY 392


>gi|255080138|ref|XP_002503649.1| predicted protein [Micromonas sp. RCC299]
 gi|226518916|gb|ACO64907.1| predicted protein [Micromonas sp. RCC299]
          Length = 324

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 11/131 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   + + +K   +P         + + ++ +A  +E  +
Sbjct: 180 MRGLTFSNELISRDEGLHCDFACLLYSMLKHPLDP--------ARLQEIVKDAVDIEKEF 231

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             + +    VG+NA    +Y++F+A+R   Q+G+E ++  T NPF WM E+I L+ + NF
Sbjct: 232 VCDALSCALVGMNADLMSEYIEFVADRLMTQLGVEKVWN-TPNPFEWM-EMISLQGKANF 289

Query: 120 FETRVTEYQQG 130
           FE RV +YQ+ 
Sbjct: 290 FEHRVDQYQKA 300


>gi|303272255|ref|XP_003055489.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463463|gb|EEH60741.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 322

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K    H    E  Q+   ++ +A  +E  + 
Sbjct: 180 MRGLTFSNELISRDEGLHCDFACLLYSMLK----HPLEPERLQE---IVKDAVEIEKEFV 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +    VG+NA    +Y++F+A+R   Q+G++ ++  T NPF WM E I L+ + NFF
Sbjct: 233 CDALSCALVGMNADLMSEYIEFVADRLLVQLGVDKVWN-TPNPFDWM-ESISLQGKTNFF 290

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 291 ERRVGEYQRNG 301


>gi|89097912|ref|ZP_01170799.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
 gi|89087414|gb|EAR66528.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
          Length = 353

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 4/130 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE LH++  + +  +I  E P   TKE  + + +   EA  LEI +A
Sbjct: 212 MVATSTMINYINRDEQLHVDLFVKIFREILDEYPEQNTKELAEFAESTFREAAYLEIEWA 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS--EVIDLKKEK 117
              +     G+     E+Y++F AN R +Q+G    F+ +  NP  W+   E +DL K  
Sbjct: 272 RSIIGDKISGILIGDVEEYIRFYANVRSNQLGFNRPFEGSRTNPLRWIKAYEEVDLGK-S 330

Query: 118 NFFETRVTEY 127
           +FFE +  +Y
Sbjct: 331 DFFEQKPRQY 340


>gi|312381384|gb|EFR27142.1| hypothetical protein AND_06323 [Anopheles darlingi]
          Length = 390

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++   ++ +A ++E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------YLVQKPSRKRVTDIIRDAVMIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G E ++  T+NPF +M E I L+ + NFF
Sbjct: 306 TKALPVDMLGMNCELMSQYIEFVADRLLVELGCEKVYN-TKNPFSFM-EFISLEGKTNFF 363

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 364 EKKVGEYQK 372


>gi|85375147|ref|YP_459209.1| ribonucleotide-diphosphate reductase subunit beta [Erythrobacter
           litoralis HTCC2594]
 gi|84788230|gb|ABC64412.1| ribonucleotide reductase beta subunit [Erythrobacter litoralis
           HTCC2594]
          Length = 356

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 72/132 (54%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    + + ++  +     +TK  ++    +  ++  LE  + 
Sbjct: 178 MKGMGQIVSWSVRDESLHCEGIVRLFHEF-VRERDCYTKAVKEDIIDICQKSVRLEDNFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     ++Y+++IA+ R  Q+GL+P++   ++P PW++ +++  +  NF
Sbjct: 237 DLAFEMGPVSGMTPKEIKKYIRYIADWRLGQLGLQPIYMVDDHPLPWLAPLLNGVEHANF 296

Query: 120 FETRVTEYQQGA 131
           FE R TEY +GA
Sbjct: 297 FEQRATEYSKGA 308


>gi|56551339|ref|YP_162178.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis ZM4]
 gi|241760992|ref|ZP_04759081.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753042|ref|YP_003225935.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
 gi|56542913|gb|AAV89067.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374611|gb|EER64072.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552405|gb|ACV75351.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 345

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH   GI  +     +     TK+ +     +      +E A+ 
Sbjct: 178 MKGMGQIVSWSVRDESLHCE-GIIRLFHTFCQERQCLTKQVKDDILNICQRTVRIEDAFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     ++Y+++IA+ R  Q+GL P++   E+P PW++ +++  +  NF
Sbjct: 237 DLVFEMGPVEGMTPKEIKKYIRYIADWRLGQLGLSPIYMIEEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGA 131
           FETR TEY + A
Sbjct: 297 FETRSTEYSKAA 308


>gi|154149104|ref|YP_001405803.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           hominis ATCC BAA-381]
 gi|153805113|gb|ABS52120.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           hominis ATCC BAA-381]
          Length = 340

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+  +   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFNDKNIAKIYEMFEKAGELEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL     E+Y+ ++ + R   IGL   +    +P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGLTDEIIEEYIHYLVDNRLSAIGLNKKYN-ARHPIKWVDDFAKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE++VT Y +G+
Sbjct: 323 FESKVTNYSKGS 334


>gi|302696699|ref|XP_003038028.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
 gi|300111725|gb|EFJ03126.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
          Length = 377

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H  F   + + ++   PH          + ++ EA  +E  + 
Sbjct: 245 MPGLTFSNELISRDEGMHTEFACLLFSHLR-HRPH------PSVVQRIVKEAVAIEHEFL 297

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R  + +G   ++  T NPF +M ++I L+ + NFF
Sbjct: 298 SDALPVSLIGMNAALMRQYIEFVADRLLYSLGQNKIYNAT-NPFDFM-DMISLQGKTNFF 355

Query: 121 ETRVTEYQQG 130
           E RV+EY + 
Sbjct: 356 EKRVSEYAKA 365


>gi|302678465|ref|XP_003028915.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
 gi|300102604|gb|EFI94012.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
          Length = 331

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   +   ++   PH          R ++ EA  +E  + 
Sbjct: 190 MPGLTFSNELITRDEGMHTDFACLLFAHLR-RRPH------PDVVRRIIMEAVTIEQEFL 242

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G E ++  T NPF +M ++I L+ + NFF
Sbjct: 243 TDALPVSLIGMNSTLMCQYIEFVADRLLVALGNEKVYNVT-NPFDFM-DMISLQGKTNFF 300

Query: 121 ETRVTEYQQGA 131
           E RV++Y+  A
Sbjct: 301 EKRVSDYKMAA 311


>gi|170032272|ref|XP_001844006.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
 gi|167872122|gb|EDS35505.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
          Length = 391

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++   ++ EA ++E  + 
Sbjct: 254 MPGLTFSNELISRDEGLHTDFACLMFR-------YLVQKPSKERVLEIIREAVVIEQEFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G E ++  T+NPF +M E I L+ + NFF
Sbjct: 307 TKALPVDLLGMNCELMSQYIEFVADRLLLELGNEKIYN-TKNPFSFM-EFISLEGKTNFF 364

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 365 EKKVGEYQK 373


>gi|224372455|ref|YP_002606827.1| ribonucleotide-diphosphate reductase subunit beta [Nautilia
           profundicola AmH]
 gi|223589410|gb|ACM93146.1| ribonucleoside-diphosphate reductase, beta subunit [Nautilia
           profundicola AmH]
          Length = 346

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 3/134 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  H     ++  +IK E P L+T E  +  + ML+ A  LE  + 
Sbjct: 207 MLGSAQMIRFIQRDEVTHTLLFANIFKEIKKEFPDLFTPEVIKNIKDMLYAAYELERDWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKKEK- 117
                   +G++    +++ Q++AN+R   +GL+ LF     +NP  W        ++K 
Sbjct: 267 WYITNDEILGMSKELIDRFTQYLANKRAQAMGLDLLFPEVGLKNPISWFDGFSSFNEQKT 326

Query: 118 NFFETRVTEYQQGA 131
           NFFE  V  Y +G+
Sbjct: 327 NFFEGNVVNYSKGS 340


>gi|156839886|ref|XP_001643629.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114248|gb|EDO15771.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 394

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K        ++ EA  +E  Y 
Sbjct: 252 MPGLTFSNELICRDEGLHTDFASLLFS-------HLDNKPDPAIVEKIVTEAVEIEKRYF 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G E  +K  ENPF +M E I L  + NFF
Sbjct: 305 IDALPVALLGMNAKLMNQYVEFVADRLLVSFGNEKYYK-VENPFDFM-ENISLAGKTNFF 362

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+ +
Sbjct: 363 EKRVSDYQKAS 373


>gi|153952438|ref|YP_001397460.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939884|gb|ABS44625.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 340

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN +  E P L+  E   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVHKERPDLFHDENINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE++VT Y +G+
Sbjct: 323 FESKVTNYSKGS 334


>gi|296082342|emb|CBI21347.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 6/108 (5%)

Query: 28  QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 83
           QI IEN H    L  K  +++ + ++ ++  +E  +  + +P   VG+N+    QY++F+
Sbjct: 102 QIAIENIHSEILLRNKLSEERVKAIVADSVDIEREFVCDALPCALVGMNSALMSQYIEFV 161

Query: 84  ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 131
           A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 162 ADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 207


>gi|195027582|ref|XP_001986661.1| GH20400 [Drosophila grimshawi]
 gi|193902661|gb|EDW01528.1| GH20400 [Drosophila grimshawi]
          Length = 393

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVMMFQ-------HLVQRPSRERIIEIVSDAVTIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     +Y++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCALMSEYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 367 EKKVGEYQR 375


>gi|74229799|ref|YP_309003.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
 gi|72259713|gb|AAZ67484.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
          Length = 318

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 7/131 (5%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F     N+   +   L     + K   M  EA  +E  +   
Sbjct: 184 GLTYSNELISRDEGLHTDFACLYYNKYIAKEDKLS----ESKVLNMFKEAVDIEKDFFTN 239

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +G+NA S  +Y++F+A+R   ++G E  FK T NPF +M+  I L+ + NFFE 
Sbjct: 240 ALPVAMLGMNAHSMCEYIEFVADRLLIELGYEKYFK-TLNPFEFMNN-ISLEGKTNFFEK 297

Query: 123 RVTEYQQ-GAG 132
           RV EY++ GA 
Sbjct: 298 RVGEYKRFGAA 308


>gi|47213105|emb|CAF89525.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 198

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K   Q    ++  A  +E  + 
Sbjct: 61  MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFL 113

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    ++Y++F+A+R   ++G   +++  ENPF +M E I L+ + NFF
Sbjct: 114 TEALPVKLIGMNCQLMKRYIEFVADRLLLELGFAKIYR-AENPFDFM-ENISLEGKTNFF 171

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 172 EKRVGEYQR 180


>gi|294463759|gb|ADE77404.1| unknown [Picea sitchensis]
          Length = 289

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K       +K  +++ + ++ +A  +E  + 
Sbjct: 148 MPGLTFSNELISRDEGLHCDFACLLYSLLK-------SKLSEERVKAIVRDAVDIEREFV 200

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    VG+NA    QY++FIA+R    +G   ++ + ENPF WM ++I L+ + NFF
Sbjct: 201 CEALSCDLVGMNATLMSQYIKFIADRLLVALGHGKMY-HVENPFDWM-DLISLQGKTNFF 258

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 259 ERRVGDYQKAS 269


>gi|155370982|ref|YP_001426516.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
 gi|155124302|gb|ABT16169.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
          Length = 325

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  FG  + +  K+EN     K      ++++ EA   E  + 
Sbjct: 189 MPGLGLSNEFISRDEGLHQQFGELLYS--KLEN-----KLSLDVVKSIVEEAVANEKDFI 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G    F   ENPF +M E+I L+ + NFF
Sbjct: 242 CDAIPCRMIGMNSDLMSQYIEFVADRIFTALGYPKQFG-AENPFDFM-ELISLEGKSNFF 299

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV+EYQ+   +  D
Sbjct: 300 ERRVSEYQKAGVMNAD 315


>gi|308485547|ref|XP_003104972.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
 gi|308257293|gb|EFP01246.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
          Length = 323

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   +  +I ++ P       ++    ++ EA  +E+ +  +
Sbjct: 188 GLTHSNELISRDEGLHRDFACLLFTKI-VDKPS------REIVCEIVDEAVTIELEFLDQ 240

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +G+N     QY++++A+    ++G E L+ +T NPF +M E I +  + NFFE 
Sbjct: 241 ALPVNVIGMNYTLMSQYIKYVADHLLEELGFEKLY-HTINPFDFM-ENISIDGKTNFFEK 298

Query: 123 RVTEYQQGA 131
           RV+EYQ+  
Sbjct: 299 RVSEYQRSG 307


>gi|254586079|ref|XP_002498607.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
 gi|238941501|emb|CAR29674.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
          Length = 412

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  +        ++ EA  +E  Y 
Sbjct: 272 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNRPSPDIVERIITEAVSIEKRYF 324

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T NPF +M E I L  + NFF
Sbjct: 325 EDALPVALLGMNAALMNQYVEFVADRLLVALGNEKYYNVT-NPFDFM-ENISLAGKTNFF 382

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 383 EKRVSDYQKAG 393


>gi|323452425|gb|EGB08299.1| hypothetical protein AURANDRAFT_59025 [Aureococcus anophagefferens]
          Length = 319

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + ++++        K    +  +++  A  +E ++ 
Sbjct: 182 MPGLSFSNELIARDEGLHCDFACLLYSKLR-------KKLSDVQVASIVGAAVDIEKSFV 234

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N+ S  +Y++F A+R   ++G   L+  T NPF WM E+I L+ + NFF
Sbjct: 235 VSALPVELIGMNSKSMCKYIEFCADRLLLELGYSTLYGAT-NPFDWM-ELISLQGKTNFF 292

Query: 121 ETRVTEYQQG 130
           E RV EY + 
Sbjct: 293 EKRVGEYAKA 302


>gi|269963257|ref|ZP_06177590.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
 gi|269832005|gb|EEZ86131.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
          Length = 310

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 14/132 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG---IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI 57
           + G+A     I RDE LH +F       + Q K+          QQ+   +  EA  +E 
Sbjct: 178 LAGLAASNDLIARDEGLHFSFSALLFKTLGQGKVT---------QQEFEEICREAVSIEK 228

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
            +  E +P   +G+NA    QY++  A+      G  P+F   ENPF +M  ++D++ + 
Sbjct: 229 EFVTEALPVDLIGMNAELMCQYIEHTADVIAGLFGFTPIFG-AENPFDYM-RLLDMEGKT 286

Query: 118 NFFETRVTEYQQ 129
           NFFE RVTEY++
Sbjct: 287 NFFEKRVTEYKR 298


>gi|57505748|ref|ZP_00371674.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
 gi|57016021|gb|EAL52809.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
          Length = 340

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+ ++   K  +M   A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLIAINLDKIYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE++VT Y +G+
Sbjct: 323 FESKVTNYSKGS 334


>gi|325475472|gb|EGC78653.1| ribonucleoside-diphosphate reductase [Treponema denticola F0402]
          Length = 351

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T +  +  R M+ E    EIA+ 
Sbjct: 211 MPGSVQEIRYINRDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRGMIREGCEQEIAWG 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
           +  +     GLN+     Y+Q++ N RC  +G  P++  + E P    W+S+  +    K
Sbjct: 271 NYVIGNDIPGLNSQMITDYIQYLGNLRCENLGFAPIYDGHKEEPQSMSWVSQYSNANLIK 330

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y + + +
Sbjct: 331 TDFFEAKSTAYAKSSAM 347


>gi|190896572|gb|ACE96799.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896574|gb|ACE96800.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896576|gb|ACE96801.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896578|gb|ACE96802.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|190896570|gb|ACE96798.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896582|gb|ACE96804.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-AANPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|312075738|ref|XP_003140550.1| ribonucleotide reductase M2 B [Loa loa]
 gi|307764288|gb|EFO23522.1| ribonucleotide reductase M2 B [Loa loa]
          Length = 350

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   IK        K  +++   ++ EA  +E  Y 
Sbjct: 213 MPGLTHSNELISRDEGLHRDFACLLYTYIK-------NKPSEERIYQIIREAVDIEKEYL 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++++A+    ++    ++ Y++NPF +M E I ++ + NFF
Sbjct: 266 TEALPVDLIGINCKLMCQYIEYVADHLLTELHCAKMY-YSDNPFDFM-ERISIEAKTNFF 323

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+   L
Sbjct: 324 EKRVSEYQKAGVL 336


>gi|190896568|gb|ACE96797.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896580|gb|ACE96803.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEEQVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-AANPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|323453718|gb|EGB09589.1| hypothetical protein AURANDRAFT_60022 [Aureococcus anophagefferens]
          Length = 393

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 7/128 (5%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + +++     HL   +   ++  ++ EA   E+ +  +
Sbjct: 255 GLGFANELISRDEGLHCDFACALYSRLP---GHLRLSD--AEATAIISEAVDTEVDFVTD 309

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   VG+NA     Y++F+A+R    +G  P      NPF +M E+I ++ + NFFE 
Sbjct: 310 ALPVSLVGMNAKLMTDYVKFVADRLLASLG-HPKIYGAANPFDFM-ELISMQGKTNFFEK 367

Query: 123 RVTEYQQG 130
           RV EYQ+ 
Sbjct: 368 RVAEYQKA 375


>gi|213511642|ref|NP_001133495.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
 gi|209154228|gb|ACI33346.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
          Length = 387

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  ++    ++  A  +E  + 
Sbjct: 250 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSKETVTKLIRNAVEIEQEFL 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFF
Sbjct: 303 TKALPVKLIGMNCDLMTQYIEFVADRLMLELGFDKIYR-VENPFDFM-ENISLEGKTNFF 360

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 361 EKRVGEYQR 369


>gi|325831705|ref|ZP_08164922.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
 gi|325486576|gb|EGC89025.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
          Length = 347

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ ++K E P L+T E  ++ R M+ E    EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRNILLELKEEEPELFTPELVEEYRAMIKEGCEQEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
           H  +     GLN      Y+Q++ N RC Q+G EPL++  E       W+S+  +    K
Sbjct: 267 HYAIGDEVAGLNKQMVTDYIQYLGNLRCTQLGFEPLYEGHEREPESMSWVSQFSNANMIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y + + L
Sbjct: 327 TDFFEARSTAYAKSSAL 343


>gi|298707394|emb|CBJ30029.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 380

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 18/138 (13%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGI----DVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           M G+    + I RDE LH +F       ++N++ +E           +   ++ +A  +E
Sbjct: 243 MPGLCFSNELISRDEGLHTDFACLLFRKLVNKLPVE-----------RVAEIICDAVDIE 291

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 116
             +    +P   +G+N+    QY++F A+R   ++G E  +  T NPF WM E+I L+ +
Sbjct: 292 KEFITSALPVELIGMNSALMRQYIEFCADRLLMELGCEKKYNST-NPFDWM-EMISLQGK 349

Query: 117 KNFFETRVTEY-QQGAGL 133
            NFFE RV EY + G G+
Sbjct: 350 TNFFEKRVGEYSKSGVGV 367


>gi|315637824|ref|ZP_07893014.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
 gi|315482065|gb|EFU72679.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
          Length = 340

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+ ++   K  +M   A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLIAINLDRIYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE++VT Y +G+
Sbjct: 323 FESKVTNYSKGS 334


>gi|257458932|ref|ZP_05624052.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
 gi|257443636|gb|EEV18759.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
          Length = 340

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+ K    K   M   A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERADLFNKRNVDKIYEMFETAGNLEIDWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   IGLE  +   ++P  W+ +      +K NF
Sbjct: 264 KYITDNQIMGFTDDIIEEYIHYLVDQRLLAIGLEKRYD-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE++VT Y +G+
Sbjct: 323 FESKVTNYSKGS 334


>gi|9632043|ref|NP_048832.1| hypothetical protein PBCV1_A476R [Paramecium bursaria Chlorella
           virus 1]
 gi|1620147|gb|AAC96843.1| contains ribonucleotide reductase (RR) signature; similar to
           tobacco RR small subunit, corresponds to Swiss-Prot
           Accession Number P49730 [Paramecium bursaria Chlorella
           virus 1]
          Length = 324

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 76/134 (56%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  FG  + ++++ + P        +  + ++ EA   E  + 
Sbjct: 188 MPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFF
Sbjct: 241 CDAIPCRLIGMNAELMGQYIEFVADRIFVALGYEKVYN-SKNPFAFM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   +K
Sbjct: 299 EKRVSDYQRPGVMK 312


>gi|291239432|ref|XP_002739627.1| PREDICTED: hCG23833-like [Saccoglossus kowalevskii]
          Length = 309

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+ +  ++I RDE LH  F   +  +IK   P         K R ++ E   +E  + 
Sbjct: 178 LAGLTQANEFISRDEGLHCTFACTMYGKIKPRLP-------DTKVRKIVLEGCEVEKLFV 230

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              + K  +G+N+   E Y+ F+ +     +G E  F    NPFP+M   I ++ + NFF
Sbjct: 231 KHALRKPLLGMNSHLMETYVNFVTDNLLTDLGYEKEFG-VNNPFPFMDN-ISMQGKTNFF 288

Query: 121 ETRVTEYQQGAG 132
           E RVTEY +  G
Sbjct: 289 ERRVTEYTRLTG 300


>gi|163801385|ref|ZP_02195284.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
 gi|159174874|gb|EDP59674.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
          Length = 310

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 14/132 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG---IDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI 57
           + G+A     I RDE LH +F       + Q K+          QQ+   +  EA  +E 
Sbjct: 178 LAGLAASNDLIARDEGLHFSFSALLFKTLGQGKVT---------QQEFEEICREAVSIEK 228

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
            +  E +P   +G+NA    QY++  A+      G  P F  +ENPF +M  ++D++ + 
Sbjct: 229 EFVTEALPVDLIGMNAELMCQYIEHTADVIADLFGFNPAFG-SENPFDYM-RLLDMEGKT 286

Query: 118 NFFETRVTEYQQ 129
           NFFE RVTEY++
Sbjct: 287 NFFEKRVTEYKR 298


>gi|262263187|dbj|BAI48096.1| ribonucleotide reductase M2 [Sus scrofa]
          Length = 355

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 9/128 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 235 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFL 287

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 288 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFF 345

Query: 121 ETRVTEYQ 128
           E RV E +
Sbjct: 346 EKRVGEIR 353


>gi|254293199|ref|YP_003059222.1| ribonucleotide-diphosphate reductase subunit beta [Hirschia baltica
           ATCC 49814]
 gi|254041730|gb|ACT58525.1| Ribonucleoside-diphosphate reductase [Hirschia baltica ATCC 49814]
          Length = 345

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    + + +    E   L TK  +            LE  + 
Sbjct: 187 MKGMGQIVSWSVRDESLHCEGMMKMFHTYAEETGAL-TKTVKDDITDCCQTVVKLEDKFI 245

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     + Y+++IA+ R  Q+ L+P++   E+P PW++E+++  +  NF
Sbjct: 246 DLAFEAGEVEGMTPEDIKNYIRYIADWRLKQLKLDPVYGVDEHPIPWLTEILNGVEHANF 305

Query: 120 FETRVTEYQQGA 131
           FE R TEY +GA
Sbjct: 306 FEARATEYSKGA 317


>gi|305665630|ref|YP_003861917.1| putative ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
 gi|88710386|gb|EAR02618.1| probable ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
          Length = 328

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 74/136 (54%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++ +       +   H+  K  +++   ++ +A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGMHCDYAV------HLHKNHIVNKVTKERITDIIVDALNIEREFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+ +R   ++  + ++  + NPF +M ++I L+ + NFF
Sbjct: 241 TESLPVSLIGMNSKLMTQYLEFVTDRLLVELECDKVYN-SSNPFDFM-DMISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV+EYQ+   L  D
Sbjct: 299 EKRVSEYQKAGVLNKD 314


>gi|148554425|ref|YP_001262007.1| ribonucleotide-diphosphate reductase subunit beta [Sphingomonas
           wittichii RW1]
 gi|148499615|gb|ABQ67869.1| Ribonucleoside-diphosphate reductase [Sphingomonas wittichii RW1]
          Length = 350

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH   GI  +    ++     T   +     M  +   +E A+ 
Sbjct: 178 MKGMGQIVTWSIRDETLHCE-GIVRLFHAFVKERDCLTASVKDDILDMCQKTVRIEDAFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     ++Y+++IA+ R  Q+GL+P++   ++P PW++ +++  +  NF
Sbjct: 237 DLVFEMGPVNGMTPKDIKKYVRYIADWRLGQLGLKPIYMIEDHPLPWLAPLLNGVEHANF 296

Query: 120 FETRVTEYQQGA 131
           FETR TEY + A
Sbjct: 297 FETRATEYSKAA 308


>gi|268678691|ref|YP_003303122.1| ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268616722|gb|ACZ11087.1| Ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 340

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN  K E P L+T   + K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINTTKKERPDLFTDALKAKVYEMFQKAGDLEIEWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E Y+ ++ + R   +G + L+    +P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIETYIHYLVDDRLTAVGFDKLYN-ASHPIKWVDDFSKFNDQKTNF 322

Query: 120 FETRVTEYQQGA 131
           FE  V+ Y +G+
Sbjct: 323 FEGNVSNYSKGS 334


>gi|157952945|ref|YP_001497837.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
 gi|155123172|gb|ABT15040.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
          Length = 324

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  FG       ++    L  K   +  + ++ EA   E  + 
Sbjct: 188 MPGLCLSNEFISRDEGLHQQFG-------ELMYSKLQNKLSFETIKQIIMEAVTNEKEFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFF
Sbjct: 241 CDAIPCSMIGMNADLMNQYIEFVADRIFTALGYEKVYN-SKNPFAFM-ELISLEGKTNFF 298

Query: 121 ETRVTEYQQ 129
           E RV++YQ+
Sbjct: 299 EKRVSDYQR 307


>gi|310798394|gb|EFQ33287.1| ribonucleotide reductase [Glomerella graminicola M1.001]
          Length = 413

 Score = 67.8 bits (164), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  + 
Sbjct: 263 MPGLTFSNELISRDEGLHTDFACLLYS-------HLKNRPSKQVIQDIIVDAVQIEQEFL 315

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G + ++K + NPF +M E I L  + NFF
Sbjct: 316 TEALPCALLGMNSNLMKQYIEFVADRLLVALGNDKVYK-SSNPFDFM-ENISLGGKTNFF 373

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 374 EKRVADYQKAG 384


>gi|288800286|ref|ZP_06405744.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288332499|gb|EFC70979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 347

 Score = 67.4 bits (163), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +       M+ E    EIA+ 
Sbjct: 207 MSGSAQEIRYINRDENTHLWLFRNIIQELKKEEPDLFTPDKVAVYEAMMREGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKKEK 117
              +     GLNA   + Y++++ N R H +G + L++          W+S+  +    K
Sbjct: 267 QYVIGNDIQGLNAQMVDDYIRYLGNLRWHSLGFDYLYEDNRTEPENMRWVSQYSNANMVK 326

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 327 TDFFEAKSTAYAKSTALEDD 346


>gi|44971395|gb|AAS49745.1| RPXV032 [Rabbitpox virus]
          Length = 319

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|6969682|gb|AAF33894.1| TF4L [Vaccinia virus Tian Tan]
          Length = 319

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE L  +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLRCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    E Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMETYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQQ
Sbjct: 294 EKRVGEYQQ 302


>gi|50545856|ref|XP_500466.1| YALI0B03630p [Yarrowia lipolytica]
 gi|49646332|emb|CAG82692.1| YALI0B03630p [Yarrowia lipolytica]
          Length = 403

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLENRPSKKIVEDVIVEAVGIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P G +G+NA    QY++F+A+R    +G   ++  T NPF +M E I L  + NFF
Sbjct: 313 TDALPCGLLGMNAKLMCQYIEFVADRLLVALGNSKVYNST-NPFDFM-ENISLAGKTNFF 370

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 371 EKRVSDYQKAG 381


>gi|56713400|gb|AAW23440.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|56713684|gb|AAW23722.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|88854075|gb|ABD52493.1| ribonucleoside-diphosphate reductase subunit [Vaccinia virus]
 gi|167412519|gb|ABZ79953.1| ribonucleotide reductase small subunit [Vaccinia virus GLV-1h68]
          Length = 319

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|308809930|ref|XP_003082274.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
 gi|116060742|emb|CAL57220.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
          Length = 382

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 17/135 (12%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLE 56
           M G+    + I RDE LH +F   +   +  +NP          S   LH    +A  +E
Sbjct: 244 MRGLTFSNELISRDEGLHCDFACLLYGML--QNP---------LSEATLHHIVGDAVKIE 292

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 116
             +  + +    VG+NA     Y++F+A+R   Q+G   LF    NPF WM E+I L+ +
Sbjct: 293 KEFVCDALSCSLVGMNADMMSTYIEFVADRLLIQLGASKLFNAV-NPFDWM-ELISLQGK 350

Query: 117 KNFFETRVTEYQQGA 131
            NFFE RV +YQ+  
Sbjct: 351 ANFFEHRVDQYQKAG 365


>gi|111184227|gb|ABH08147.1| HSPV044 [Horsepox virus]
          Length = 319

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|20178418|ref|NP_619839.1| CPXV051 protein [Cowpox virus]
 gi|20153036|gb|AAM13497.1|AF482758_48 CPXV051 protein [Cowpox virus]
          Length = 333

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 250 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 307

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 308 EKRVGEYQK 316


>gi|132628|sp|P20493|RIR2_VACCC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335366|gb|AAA48018.1| putative F4L [Vaccinia virus Copenhagen]
          Length = 319

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|56404698|sp|O57175|RIR2_VACCA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2772676|gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus]
 gi|47088360|gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|160857924|emb|CAM58212.1| ribonucleotide reductase small subunit [Vaccinia virus Ankara]
          Length = 319

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|266919|sp|P29883|RIR2_VACCP RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335710|gb|AAA48294.1| F14 [Vaccinia virus]
          Length = 319

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|90660281|gb|ABD97395.1| ribonucleotide reductase small subunit [Cowpox virus]
          Length = 333

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 250 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 307

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 308 EKRVGEYQK 316


>gi|22164633|ref|NP_671546.1| EVM028 [Ectromelia virus]
 gi|22123774|gb|AAM92332.1|AF523264_28 EVM028 [Ectromelia virus]
          Length = 319

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++FIA+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFIADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|15150459|ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|15149031|gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|22595554|gb|AAN02587.1| ribonucleotide reductase small subunit [Lumpy skin disease virus
           NW-LW]
          Length = 321

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K    +       +    +++EA  +E  + 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSN-------EIITIIINEAVSIEKEFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++FIA+R   ++G + +F  T NPF +M E I L+ + NFF
Sbjct: 237 TNIIPVKLIGMNCDLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFF 294

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 295 EKRVSEYQK 303


>gi|66275840|ref|YP_232925.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|132629|sp|P11158|RIR2_VACCV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335624|gb|AAA48244.1| F4L protein [Vaccinia virus]
 gi|335809|gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit [Vaccinia
           virus]
 gi|29692149|gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus WR]
          Length = 319

 Score = 67.4 bits (163), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|195436539|ref|XP_002066225.1| GK22247 [Drosophila willistoni]
 gi|194162310|gb|EDW77211.1| GK22247 [Drosophila willistoni]
          Length = 395

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 258 MPGLTFSNEMISRDEGLHCDFAVLMFQ-------HLVQRPSRERIIEIIRDAVQIEQEFL 310

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 311 TVALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFSFM-EMISLDGKTNFF 368

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 369 EKKVGEYQR 377


>gi|46446983|ref|YP_008348.1| ribonucleoside-diphosphate reductase small chain [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|46400624|emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 323

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + +Q+  + P        +  + ++  A  +E  + 
Sbjct: 186 MPGLSFANELISRDEGLHCDFACLLYSQLNNKLP-------LETLQAIISHAVAIEKEFV 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G   L+   +NPF +M ++I +  + NFF
Sbjct: 239 QDALPVRLIGMNATLMCQYIEFVADRLLVALGSPKLYN-VDNPFDFM-DLISMPGKTNFF 296

Query: 121 ETRVTEYQQGA 131
           E RV+EYQ+  
Sbjct: 297 ERRVSEYQKSG 307


>gi|57168357|ref|ZP_00367491.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|305432773|ref|ZP_07401932.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
 gi|57020165|gb|EAL56839.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|304444170|gb|EFM36824.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
          Length = 340

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+ +    K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFNENNINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLVAINLDKIYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE++VT Y +G+
Sbjct: 323 FESKVTNYSKGS 334


>gi|22595713|gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus]
          Length = 321

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K    +            +++EA  +E  + 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSN-------DIITIIINEAVSIEKEFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++FIA+R   ++G + +F  T NPF +M E I L+ + NFF
Sbjct: 237 TNIIPVKLIGMNCVLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFF 294

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 295 EKRVSEYQK 303


>gi|283481249|emb|CAZ69365.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 99B1]
          Length = 325

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +   H+  K   +    ++  A  LE  + 
Sbjct: 184 MPGLTFSNELISRDEGLHTDFAC------MLYRNHIIHKLPYETVLDIITNAVELERLFI 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA S   Y++F+A+R    +G    +    NPF WM E+I L+ + NFF
Sbjct: 238 CEALPVSLIGINAESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFF 295

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 296 EKRVGEYQKAG 306


>gi|13876672|gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus]
          Length = 321

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K    +            +++EA  +E  + 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSN-------DIITIIINEAVSIEKEFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++FIA+R   ++G + +F  T NPF +M E I L+ + NFF
Sbjct: 237 TNIIPVKLIGMNCVLMSQYIEFIADRLLLELGCDKVFMST-NPFDFM-ENISLEGKTNFF 294

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 295 EKRVSEYQK 303


>gi|73852496|ref|YP_293780.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
 gi|72415212|emb|CAI65449.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
          Length = 325

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +   H+  K   +    ++  A  LE  + 
Sbjct: 184 MPGLTFSNELISRDEGLHTDFAC------MLYRNHIIHKLPYETVLDIITNAVELERLFI 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA S   Y++F+A+R    +G    +    NPF WM E+I L+ + NFF
Sbjct: 238 CEALPVSLIGINAESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFF 295

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 296 EKRVGEYQKAG 306


>gi|124010268|ref|ZP_01694921.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
 gi|123983653|gb|EAY24093.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
          Length = 330

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 10/132 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G++   + I RDE LH +F   + N  IK + P+       +   +++  A  +E  +
Sbjct: 188 MPGLSFSNELISRDEGLHCDFACLLYNSYIKNKLPN-------ETVVSIIKNAVEIEKEF 240

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             + +P   +G+N+    +Y++F+A+R   ++G E  +  T NPF +M E+I L+ + NF
Sbjct: 241 VTDALPVKLIGMNSDLMSEYIEFVADRLLVELGCEKQYN-TANPFDFM-EMISLEGKTNF 298

Query: 120 FETRVTEYQQGA 131
           FE RV+EY +  
Sbjct: 299 FEKRVSEYSKAG 310


>gi|256027986|ref|ZP_05441820.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           D11]
          Length = 348

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 8/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+ 
Sbjct: 208 MVGTSDIIRLINRDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E   
Sbjct: 265 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 324

Query: 117 -KNFFETRVTEYQQGAGL 133
             NFFE  VT Y   + +
Sbjct: 325 KSNFFEGTVTSYNMSSSI 342


>gi|149185037|ref|ZP_01863354.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
 gi|148831148|gb|EDL49582.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
          Length = 352

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + ++   E   L TK  ++    +  +   LE  + 
Sbjct: 178 MKGMGQIVSWSIRDESLHCEGIIRMFHEFVRERDCL-TKAVKEDIIDICQKTVRLEDNFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     ++Y+++IA+ R  Q+ L+P++   ++P PW++ +I+  +  NF
Sbjct: 237 DLAFEMGPVSGMTPKDIKKYIRYIADWRLGQLNLDPIYMVDDHPLPWLAPLINGVEHANF 296

Query: 120 FETRVTEYQQGA 131
           FE R TEY +GA
Sbjct: 297 FEQRATEYSKGA 308


>gi|311748425|ref|ZP_07722210.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
 gi|126576938|gb|EAZ81186.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
          Length = 326

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 18/139 (12%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLL 55
           M G+    + I RDE LH +F             HL+TK       ++  R ++ +A  +
Sbjct: 184 MPGLTFSNELISRDEGLHCDFAC-----------HLYTKHVVNPLPKETVREIIIDAVKI 232

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
           E  +  + +P   +G+N+    QY++F+A+R   ++  E ++  T NPF +M ++I L+ 
Sbjct: 233 EKEFVTDALPVRLIGMNSDLMCQYIEFVADRLLLELDCEKVWNST-NPFDFM-DMISLQG 290

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE RV +YQ+   +K
Sbjct: 291 KTNFFEKRVGDYQKAGVMK 309


>gi|324509007|gb|ADY43795.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 337

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   IK        K  Q++   ++ EA  LE  Y 
Sbjct: 200 MKGLTHSNELISRDEGLHRDFACLLYKYIK-------HKPSQEQVYEIIKEAVSLEQEYL 252

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++++A+    ++G   ++    NPF +M E + ++ + NFF
Sbjct: 253 TEALPVDLIGMNCRLMSQYIEYVADHLLTELGYPKVYN-ASNPFDFM-ENLSIEAKTNFF 310

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   L 
Sbjct: 311 ERRVSEYQRAGVLS 324


>gi|131840053|ref|YP_001096062.1| ORF23 [Cyprinid herpesvirus 3]
 gi|84181618|gb|ABC55221.1| hypothetical protein [Cyprinid herpesvirus 3]
 gi|109706628|gb|ABG42854.1| ORF23 [Cyprinid herpesvirus 3]
 gi|129560539|dbj|BAF48834.1| ribonucleotide reductase small chain [Cyprinid herpesvirus 3]
          Length = 335

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 8/128 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  +++ R ++ EA  +E  + 
Sbjct: 196 MPGLTFSNELISRDEGLHRDFACLLFSS------HLRHKPSKERVRAIITEAVEIEKEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   VG+N     +Y+Q++A+    Q+GL  L+  T  PF +M E I L+ + NFF
Sbjct: 250 TQSLPVSLVGMNHDLMCKYIQYVADHLLCQMGLSRLYN-TPCPFDFM-ENISLEGKTNFF 307

Query: 121 ETRVTEYQ 128
           E RV +YQ
Sbjct: 308 EKRVADYQ 315


>gi|260497963|ref|ZP_05816079.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
 gi|260196471|gb|EEW94002.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
          Length = 344

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 8/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+ 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E   
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 320

Query: 117 -KNFFETRVTEYQQGAGL 133
             NFFE  VT Y   + +
Sbjct: 321 KSNFFEGTVTSYNMSSSI 338


>gi|42525851|ref|NP_970949.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           denticola ATCC 35405]
 gi|41815901|gb|AAS10830.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           denticola ATCC 35405]
          Length = 351

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T +  +  R M+ E    EIA+ 
Sbjct: 211 MPGSVQEIRYINRDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRAMIKEGCEQEIAWG 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GLN+     Y+Q++ N RC  +G  P++  + E P    W S+  +    K
Sbjct: 271 DYVIGNDIPGLNSQMITDYIQYLGNLRCENLGFAPIYDGHREEPQSMSWASQYSNANLIK 330

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y + + +
Sbjct: 331 TDFFEAKSTAYAKSSAM 347


>gi|239826135|ref|YP_002948759.1| ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
 gi|239806428|gb|ACS23493.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
          Length = 346

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++    +  ++  E P   T E  Q  R    +A  LEI +A
Sbjct: 206 MVATSTMINYINRDEHIHVDLFAKIFKEVLNEYPEYNTPELAQFVRETFIKAAKLEIEWA 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEK 117
           +  +     G++      Y++F AN R HQ+G + P   Y  NP  W+   E +DL K  
Sbjct: 266 NYIIGNDIDGIDMHDLSAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDLGK-S 324

Query: 118 NFFETRVTEYQQ 129
           +FFE +  +Y +
Sbjct: 325 DFFEQKSRQYTK 336


>gi|257792030|ref|YP_003182636.1| ribonucleotide-diphosphate reductase subunit beta [Eggerthella
           lenta DSM 2243]
 gi|317488666|ref|ZP_07947206.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
 gi|257475927|gb|ACV56247.1| Ribonucleoside-diphosphate reductase [Eggerthella lenta DSM 2243]
 gi|316912225|gb|EFV33794.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
          Length = 347

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ ++K E P L+  E  ++ R M+ E    EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRNILLELKEEEPELFAPELVEEYRAMIKEGCEQEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
           H  +     GLN      Y+Q++ N RC Q+G EPL++  E       W+S+  +    K
Sbjct: 267 HYAIGDDVAGLNKQMVTDYIQYLGNLRCAQLGFEPLYEGHEREPESMSWVSQFSNANMIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y + + L
Sbjct: 327 TDFFEARSTAYAKSSAL 343


>gi|438946|gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small
           chain); putative [Variola major virus]
 gi|94484491|gb|ABF23604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484688|gb|ABF23800.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484886|gb|ABF23997.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724274|gb|ABG43399.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 333

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 250 TVALPVKLIGMNCEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 307

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 308 EKRVGEYQK 316


>gi|15613065|ref|NP_241368.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
 gi|14195134|sp|Q9KFH7|RIR2_BACHD RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10173115|dbj|BAB04221.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
          Length = 345

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE LH+    ++  ++ +E P L T+E +   +T L +A  LE  + 
Sbjct: 205 MVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWF 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-N 118
              +     G+N    E Y+ FIAN+R  Q+G+E P  +   NP  W+    D+   K +
Sbjct: 265 RYIIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSD 324

Query: 119 FFETRVTEYQQGAG 132
           FFE +  +Y + + 
Sbjct: 325 FFEQKSRQYAKVSA 338


>gi|289765931|ref|ZP_06525309.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
 gi|289717486|gb|EFD81498.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
          Length = 344

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 8/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+ 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E   
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 320

Query: 117 -KNFFETRVTEYQQGAGL 133
             NFFE  VT Y   + +
Sbjct: 321 KSNFFEGTVTSYNMSSSI 338


>gi|113195221|ref|YP_717351.1| ribonucleotide reductase small subunit [Taterapox virus]
 gi|90660497|gb|ABD97610.1| ribonucleotide reductase small subunit [Taterapox virus]
          Length = 319

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|58260896|ref|XP_567858.1| ribonucleoside-diphosphate reductase [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134116993|ref|XP_772723.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255341|gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229939|gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 401

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   ++   PH            ++ EA  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHTDFACLLFTHLR-RRPH------PDTIARIIKEAVTIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E ++  T NPF +M E+I L+ + NFF
Sbjct: 310 TDALPVSLIGMNAKLMCQYIEFVADRLLVAMGNEKIWNST-NPFDFM-EMISLQGKANFF 367

Query: 121 ETRVTEYQQG 130
           E+RV+ Y + 
Sbjct: 368 ESRVSAYSKS 377


>gi|154505112|ref|ZP_02041850.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
 gi|153794591|gb|EDN77011.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
          Length = 347

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T E  +  + ML E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNMILEMKKELPELFTPEHIEILKEMLKEGVRQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK 117
           H  +     GL      +Y+Q++ N R   +G +P++   T+ P    W+S+  +    K
Sbjct: 267 HYVIGNQIAGLTKEMITEYIQYLGNLRFTNLGFDPIYPDQTQEPDSMRWVSQYSNANMVK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y +   L
Sbjct: 327 TDFFEAKSTAYAKSTAL 343


>gi|885759|gb|AAA69374.1| E4L [Variola virus]
 gi|5830589|emb|CAB54628.1| E4L protein [Variola minor virus]
 gi|94483674|gb|ABF22791.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484287|gb|ABF23401.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485692|gb|ABF24799.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486095|gb|ABF25200.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486298|gb|ABF25402.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486501|gb|ABF25604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486703|gb|ABF25805.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486906|gb|ABF26007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487312|gb|ABF26411.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487921|gb|ABF27017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489931|gb|ABF29017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724476|gb|ABG43600.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635085|gb|ABU91534.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|10432587|dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes]
          Length = 418

 Score = 67.0 bits (162), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE +H +F   + + ++   PH  T E       ++ EA  +E  + 
Sbjct: 275 MPGLAFSNELISRDEGMHTDFACLLFSHLR-RRPHPDTVE------RIIKEAVAIEQEFL 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + L+  T NPF +M ++I L+ + NFF
Sbjct: 328 TDALPVSLIGMNATLMCQYIEFVADRLLVALGNKKLYNST-NPFDFM-DMISLQGKTNFF 385

Query: 121 ETRVTEYQQGA 131
           E RV++Y +  
Sbjct: 386 EKRVSDYSKAG 396


>gi|149279601|ref|ZP_01885730.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
 gi|149229637|gb|EDM35027.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
          Length = 324

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE  H  F   + + +K        K  ++    ++ +A  +E  + 
Sbjct: 185 MPGLTFSNELISRDEGSHCEFACLLYSMLK-------NKLSEEHVHGIIRDAVEIEKEFV 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R   ++G   ++  T NPF +M E+I L+ + NFF
Sbjct: 238 TDALPVALIGMNAKLMSQYIEFVADRWLQELGYTKIYHAT-NPFDFM-EMISLQGKTNFF 295

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   L
Sbjct: 296 EKRVGDYQKSGVL 308


>gi|303278144|ref|XP_003058365.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459525|gb|EEH56820.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 338

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       +L  K      R ++ EA  +E  + 
Sbjct: 196 MPGLTFSNELISRDEGLHRDFACLLYS-------YLQNKPDVSIVRQIVCEAVEIEKEFV 248

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     +Y++F+A+    Q+GLE  +  T NPF +M E+I L+ + NFF
Sbjct: 249 CDALPVSLVGMNKDLMSEYIEFVADHLLGQLGLEKEYN-TVNPFEFM-ELISLQGKTNFF 306

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 307 EKRVGEYQKSG 317


>gi|321263777|ref|XP_003196606.1| ribonucleoside-diphosphate reductase [Cryptococcus gattii WM276]
 gi|317463083|gb|ADV24819.1| Ribonucleoside-diphosphate reductase, putative [Cryptococcus gattii
           WM276]
          Length = 401

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   ++   PH            ++ EA  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHTDFACLLFTHLR-RRPH------PDTIARIIKEAVSIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E ++  T NPF +M E+I L+ + NFF
Sbjct: 310 TDALPVSLIGMNAKLMCQYIEFVADRLLVALGNEKIWNST-NPFDFM-EMISLQGKANFF 367

Query: 121 ETRVTEYQQG 130
           E+RV+ Y + 
Sbjct: 368 ESRVSAYSKS 377


>gi|885717|gb|AAA69333.1| C8L [Variola virus]
 gi|885826|gb|AAA69439.1| C8L [Variola virus]
 gi|94483878|gb|ABF22994.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484081|gb|ABF23196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485084|gb|ABF24194.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485286|gb|ABF24395.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485489|gb|ABF24597.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485894|gb|ABF25000.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487109|gb|ABF26209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487515|gb|ABF26613.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487716|gb|ABF26813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488123|gb|ABF27218.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488323|gb|ABF27417.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488523|gb|ABF27616.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488724|gb|ABF27816.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488925|gb|ABF28016.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489125|gb|ABF28215.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489324|gb|ABF28413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489527|gb|ABF28615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489726|gb|ABF28813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94490135|gb|ABF29220.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724070|gb|ABG43196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724681|gb|ABG43804.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724885|gb|ABG44007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725088|gb|ABG44209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725293|gb|ABG44413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725496|gb|ABG44615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725700|gb|ABG44818.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725903|gb|ABG45020.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726107|gb|ABG45223.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726310|gb|ABG45425.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726513|gb|ABG45627.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635013|gb|ABU91466.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635031|gb|ABU91483.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635049|gb|ABU91500.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635067|gb|ABU91517.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635103|gb|ABU91551.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635121|gb|ABU91568.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635139|gb|ABU91585.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635158|gb|ABU91603.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635176|gb|ABU91620.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635194|gb|ABU91637.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635212|gb|ABU91654.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635230|gb|ABU91671.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635248|gb|ABU91688.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635266|gb|ABU91705.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635284|gb|ABU91722.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635320|gb|ABU91756.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635338|gb|ABU91773.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635356|gb|ABU91790.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635374|gb|ABU91807.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635392|gb|ABU91824.1| ribonucleotide reductase small subunit [Variola virus]
 gi|157739431|gb|ABU91739.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|284039889|ref|YP_003389819.1| ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
 gi|283819182|gb|ADB41020.1| Ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
          Length = 349

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 8/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +   H+  K  + +   ++  A  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHRDFAC------MLYTDHIVNKLPESQIYDIIRNAVEIEQEFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA   +QY+ F+A+     +GL  ++    NPF +M ++I L+ + NFF
Sbjct: 242 ADALPVSLIGMNAELMKQYIAFVADHLLVTLGLRKMYN-VANPFDFM-DMISLQGKTNFF 299

Query: 121 ETRVTEYQQG 130
           E RV EYQ+G
Sbjct: 300 EKRVGEYQRG 309


>gi|190896518|gb|ACE96772.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 67.0 bits (162), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++ Y  NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|317472120|ref|ZP_07931452.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
 gi|316900524|gb|EFV22506.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
          Length = 347

 Score = 66.6 bits (161), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ ++K E P L+  +     R M+ +    EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
           H  +     GL     E+Y++++ N RC  +G EP++  +E       W+S+  +    K
Sbjct: 267 HYVIGDEIQGLKKEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y + + L
Sbjct: 327 TDFFEAKSTAYAKSSAL 343


>gi|317062933|ref|ZP_07927418.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688609|gb|EFS25444.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
          Length = 353

 Score = 66.6 bits (161), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  + I RDE  H+     ++ +I+ ENP  +  E   +  +M  +A   EI + 
Sbjct: 213 MMGTSDVIRLINRDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWT 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
           +  +    +G+   + EQY +++AN R   IGL+P+++ + +NP+  +++  D + E   
Sbjct: 270 NHIIGNQILGITEETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNV 329

Query: 117 -KNFFETRVTEYQQGAGLK-WD 136
             NFFE  VT Y   + +  WD
Sbjct: 330 KANFFEGTVTSYNMSSSIDGWD 351


>gi|167748341|ref|ZP_02420468.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
 gi|167652333|gb|EDR96462.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
          Length = 358

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ ++K E P L+  +     R M+ +    EI + 
Sbjct: 218 MPGSVQEIRYINRDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWG 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
           H  +     GL     E+Y++++ N RC  +G EP++  +E       W+S+  +    K
Sbjct: 278 HYVIGDEIQGLKKEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIK 337

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y + + L
Sbjct: 338 TDFFEAKSTAYAKSSAL 354


>gi|225386408|ref|ZP_03756172.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
 gi|225047489|gb|EEG57735.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
          Length = 347

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    ++I ++K E P L++ E  +  + M+ E    EIA+ 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLLRNMILELKKEEPQLFSPETVEMLKAMVEEGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
           H  +     GL      +Y++++ N R   +G EPL++ Y E P    W+ +  +    K
Sbjct: 267 HYVIGDRISGLTREMVTEYIRYLGNLRWTSLGFEPLYEGYEEEPESMKWVGQYSNANMVK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y +   L
Sbjct: 327 TDFFEAKSTAYAKSTAL 343


>gi|257468678|ref|ZP_05632772.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           ulcerans ATCC 49185]
          Length = 348

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  + I RDE  H+     ++ +I+ ENP  +  E   +  +M  +A   EI + 
Sbjct: 208 MMGTSDVIRLINRDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
           +  +    +G+   + EQY +++AN R   IGL+P+++ + +NP+  +++  D + E   
Sbjct: 265 NHIIGNQILGITEETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNV 324

Query: 117 -KNFFETRVTEYQQGAGLK-WD 136
             NFFE  VT Y   + +  WD
Sbjct: 325 KANFFEGTVTSYNMSSSIDGWD 346


>gi|282879357|ref|ZP_06288101.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|282881358|ref|ZP_06290037.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
 gi|281298554|gb|EFA90979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|281304764|gb|EFA96845.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
          Length = 347

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P ++T E  +    M+ E    EIA+ 
Sbjct: 207 MSGSAQEIRYINRDENTHLWLFRNIIKELKKEEPEMFTPEKVKVYEEMMREGVRQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
              +     GLNA     Y+ ++ N R H +G + L++  +       W+++  D    K
Sbjct: 267 QYVIGNDIQGLNAQMVTDYIHYLGNLRWHSLGFDYLYEDNQKEPEDMKWVAQYSDPNMVK 326

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   ++ D
Sbjct: 327 TDFFEAKSTAYAKSTAIEDD 346


>gi|8101697|gb|AAF72618.1|AF252539_2 ribonucleotide reductase small subunit M2 [Leishmania amazonensis]
          Length = 345

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + N H+  K  +++   ++ +A  +E  + 
Sbjct: 206 MPGLTFSNELISRDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFI 259

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFF
Sbjct: 260 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFF 317

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 318 EKRVGEYQKAG 328


>gi|190896526|gb|ACE96776.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++ Y  NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|73544537|ref|XP_848163.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|321438516|emb|CBZ12275.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 388

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + N H+  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFI 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFF
Sbjct: 303 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFF 360

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 361 EKRVGEYQKAG 371


>gi|268575178|ref|XP_002642568.1| C. briggsae CBR-RNR-2 protein [Caenorhabditis briggsae]
 gi|187023588|emb|CAP37241.1| CBR-RNR-2 protein [Caenorhabditis briggsae AF16]
          Length = 365

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  Q++   ++ +A  +E  + 
Sbjct: 228 MPGLTHSNELISRDEGLHRDFACLLYSMLQ-------NKLSQERIFEIIRDAVAIEQEFL 280

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+    ++G + L+   +NPF +M E I +  + NFF
Sbjct: 281 TEALPVDMIGMNCRLMSQYIEFVADHLLQELGCDKLYN-VKNPFDFM-ENISIDGKTNFF 338

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 339 EKRVSEYQR 347


>gi|156387375|ref|XP_001634179.1| predicted protein [Nematostella vectensis]
 gi|156221259|gb|EDO42116.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +   +L  K  ++  R ++ +A ++E  + 
Sbjct: 247 MPGLTFSNELISRDEGLHCDFAC-------LMYKYLVNKPDEETVRGIIKDAVVIEQEFL 299

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++F+A+R    +  + ++   ENPF +M E I L+ + NFF
Sbjct: 300 TSALPVKLIGMNCALMRQYIEFVADRLLVALNCQKVYN-AENPFDFM-ENISLEGKTNFF 357

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 358 EKRVGEYQKSG 368


>gi|149248382|ref|XP_001528578.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146448532|gb|EDK42920.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 422

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +   +    ++ EA  +E  + 
Sbjct: 282 MPGLTFSNELICRDEGLHTDFACLLFS-------HLENRPDPKIVEKIISEAVEIEKEFF 334

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G E ++K T NPF +M E I L  + NFF
Sbjct: 335 TDALPVSLLGMNCKLMCQYVEFVADRLLVALGNEKIYKVT-NPFDFM-ENISLAGKTNFF 392

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 393 EKRVSDYQKAG 403


>gi|3914644|sp|O46310|RIR2_LEIAM RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase M2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2828563|gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 345

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + N H+  K  +++   ++ +A  +E  + 
Sbjct: 206 MPGLTFSNELISRDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFI 259

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFF
Sbjct: 260 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFF 317

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 318 EKRVGEYQKAG 328


>gi|38683666|gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a]
          Length = 342

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+      I RDE LH    + + N +K   P     +       +  +A  LE  +  E
Sbjct: 207 GLCFANSLIARDEGLHAEGSVMIYNHLKHRLPVAVVHD-------IFTDAVALEKEFIRE 259

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+NA +   Y++++++    ++G   LF  T+NPF WM+ +I ++ + NFFE 
Sbjct: 260 SLPVSLIGINADTMSSYIEYVSDFWIQRLGYPKLFG-TKNPFEWMT-MIGMEGKSNFFEG 317

Query: 123 RVTEYQQGAGL 133
           RV EY +   +
Sbjct: 318 RVAEYAKAGSM 328


>gi|157953769|ref|YP_001498660.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
 gi|156068417|gb|ABU44124.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
          Length = 324

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 76/134 (56%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  FG  + ++++ + P        +  + ++ EA   E  + 
Sbjct: 188 MPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFF
Sbjct: 241 CDAIPCRLIGMNSELMGQYIEFVADRIFIALGYEKVYN-SKNPFAFM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   +K
Sbjct: 299 EKRVSDYQRPGVMK 312


>gi|159465835|ref|XP_001691128.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
 gi|158279814|gb|EDP05574.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
          Length = 394

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 12/137 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +        T+  + + + ++ EA  +E  + 
Sbjct: 255 MPGLTFSNELISRDEGLHCDFACMLFSMLN-------TRIDETRVKQIIVEAVEIEQEFC 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+    QY+QF+A+R    +G    +    NPF +M E+I L+ + NFF
Sbjct: 308 TEALPVDLIGMNSRLMAQYIQFVADRLLVSLGCAKQYNVV-NPFEFM-EMISLQGKTNFF 365

Query: 121 ETRVTEYQQG---AGLK 134
           E RV +YQ+    AGL+
Sbjct: 366 EKRVGDYQKNGVMAGLQ 382


>gi|326797773|ref|YP_004315592.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
 gi|326548537|gb|ADZ76922.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
          Length = 323

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F   + + ++ + P       +++ + ++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGLHCEFACLLYSMLEAKLP-------KERVQEIIIDAVEIEKEFI 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA   +QY++F+A+R   ++G    +  T NPF +M E+I L+ + NFF
Sbjct: 239 TDALPVKLIGMNADLMKQYIEFVADRWLVELGNSKYYNAT-NPFDFM-ELISLQGKTNFF 296

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 297 EKRVGDYQKSG 307


>gi|255711354|ref|XP_002551960.1| KLTH0B03938p [Lachancea thermotolerans]
 gi|238933338|emb|CAR21522.1| KLTH0B03938p [Lachancea thermotolerans]
          Length = 403

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 261 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIIERIITEAVEIEQRYF 313

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 314 RDALPVSLLGMNADLMNQYVEFVADRLLVALGNQKFYNVT-NPFDFM-ENISLAGKTNFF 371

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 372 EKRVSDYQKAG 382


>gi|308490981|ref|XP_003107682.1| CRE-RNR-2 protein [Caenorhabditis remanei]
 gi|308250551|gb|EFO94503.1| CRE-RNR-2 protein [Caenorhabditis remanei]
          Length = 377

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  Q++   ++ +A  +E  + 
Sbjct: 240 MPGLTHSNELISRDEGLHRDFACLLYSMLQ-------NKLTQERIFEIIRDAVCIEQEFL 292

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+    ++G + L+   +NPF +M E I +  + NFF
Sbjct: 293 TEALPVDMIGMNCRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFF 350

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 351 EKRVSEYQR 359


>gi|257062099|ref|YP_003139987.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
 gi|256592265|gb|ACV03152.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
          Length = 355

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I + +   PH   + +      M   A   E  + 
Sbjct: 215 MPGSADIFKMINRDELSHVRLYQKLIPEARKVFPHSVDQIYD-----MFDRAVKYECQWT 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE- 116
           +  +    +G+   S EQY +++AN R   IGL+PL+   KY ++P+  +    D KKE 
Sbjct: 270 NHIVGNNILGITEASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEA 329

Query: 117 ---KNFFETRVTEYQQGAGLK-WD 136
               NFFE  VT Y   +G+  WD
Sbjct: 330 HTKANFFEATVTSYVMSSGITGWD 353


>gi|194755279|ref|XP_001959919.1| GF11796 [Drosophila ananassae]
 gi|190621217|gb|EDV36741.1| GF11796 [Drosophila ananassae]
          Length = 393

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  K  +++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQKPRRERIIEIIRDAVDIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 367 EKKVGEYQR 375


>gi|84998662|ref|XP_954052.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain [Theileria annulata]
 gi|65305050|emb|CAI73375.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain, putative [Theileria annulata]
          Length = 322

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 61/107 (57%), Gaps = 8/107 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +FG  + + +K + P       ++  + ++ EA ++E +Y 
Sbjct: 212 MPGLTFSNELIARDEGLHADFGCFIYHNLKHKLP-------EEAVQQIIKEAVVVERSYI 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
            +++P   +G+N+    QY++F+A+R    +G+ P++  T NPF WM
Sbjct: 265 CDSLPCDLIGMNSQLMTQYIEFVADRLLQSLGVRPVYNVT-NPFDWM 310


>gi|295401051|ref|ZP_06811025.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312112173|ref|YP_003990489.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
 gi|294976844|gb|EFG52448.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311217274|gb|ADP75878.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
          Length = 346

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++    +  ++  E P   T E  +  +    +A  LEI +A
Sbjct: 206 MVATSTMINYINRDEHIHVDLFAKIFKEVLSEYPEYNTPELAEFVQATFTKAAELEIEWA 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEK 117
           +  +     G++      Y++F AN R HQ+G E P   Y  NP  W+   E +DL K  
Sbjct: 266 NYIIGNDIDGIDMHDLSAYIKFYANVRAHQLGFERPFAGYRTNPLRWIKAYEEVDLGK-S 324

Query: 118 NFFETRVTEYQQ 129
           +FFE +  +Y +
Sbjct: 325 DFFEQKSRQYTK 336


>gi|210631890|ref|ZP_03297102.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
 gi|210159815|gb|EEA90786.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
          Length = 352

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T E  +  R ML E    EIA+ 
Sbjct: 212 MPGSAQEIRYINRDENTHLWLFRNIILELQKEEPQLFTSENVEMLRQMLEEGVRQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GL     E Y++++ N R   +G   L++ Y   P    W+S+  +    K
Sbjct: 272 RYVLGDAIPGLTGDMVEGYIKYLGNLRWSSLGFGQLYEGYRSEPEDMAWVSQYSNANMVK 331

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y +   L
Sbjct: 332 TDFFEAKSTAYAKSTAL 348


>gi|313768143|ref|YP_004061574.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
 gi|312599750|gb|ADQ91771.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
          Length = 387

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE +H  F +++ N +K        K  Q     ++ +A  +E  +  +
Sbjct: 256 GLCFSNELISRDEGMHQEFAVELFNMLK-------NKPSQNTIEEIIRDAVSIEKEFITD 308

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +G+N+    +Y++++A+R   Q+G   ++  T+NPF +M E I L  + NFFE 
Sbjct: 309 ALPCSLIGMNSGKMSEYIEYVADRLSKQVGHNKIWN-TKNPFDFM-ENISLDGKTNFFEK 366

Query: 123 RVTEY 127
           RV +Y
Sbjct: 367 RVGDY 371


>gi|218249013|ref|YP_002374384.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
 gi|218169491|gb|ACK68228.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
          Length = 344

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I + +   PH   + +      M   A   E  + 
Sbjct: 204 MPGSADIFKMINRDELSHVRLYQKLIPEARKVFPHSVDQIYD-----MFDRAVKYECQWT 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE- 116
           +  +    +G+   S EQY +++AN R   IGL+PL+   KY ++P+  +    D KKE 
Sbjct: 259 NHIVGNNILGITEASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEA 318

Query: 117 ---KNFFETRVTEYQQGAGLK-WD 136
               NFFE  VT Y   +G+  WD
Sbjct: 319 HTKANFFEATVTSYVMSSGITGWD 342


>gi|6322434|ref|NP_012508.1| Rnr2p [Saccharomyces cerevisiae S288c]
 gi|1172946|sp|P09938|RIR2_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 1;
           AltName: Full=Ribonucleotide reductase R2 subunit 1;
           AltName: Full=Ribonucleotide reductase small subunit 1
 gi|52695523|pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695524|pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695525|pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695526|pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|172450|gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit [Saccharomyces
           cerevisiae]
 gi|1008142|emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae]
 gi|285812874|tpg|DAA08772.1| TPA: Rnr2p [Saccharomyces cerevisiae S288c]
          Length = 399

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   +   +K + +P +  K        ++ EA  +E  Y
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEK--------IVTEAVEIEQRY 310

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NF
Sbjct: 311 FLDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNF 368

Query: 120 FETRVTEYQQGA 131
           FE RV++YQ+  
Sbjct: 369 FEKRVSDYQKAG 380


>gi|302682638|ref|XP_003031000.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
 gi|300104692|gb|EFI96097.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
          Length = 362

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   ++  ++   PH    E       ++ EA  +E  + 
Sbjct: 226 MPGLTFSNELITRDEGMHTDFACLLLTHMR-RRPHPEVIEM------IIKEAVAIEKEFL 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M ++I L+ + NFF
Sbjct: 279 TDALPVSLIGMNADLMCQYIEFVADRLLVALGNDKVWNAT-NPFDFM-DMISLQGKTNFF 336

Query: 121 ETRVTEYQQGA 131
           E RV++Y+  A
Sbjct: 337 EKRVSDYKIAA 347


>gi|290771185|emb|CAY80753.2| Rnr2p [Saccharomyces cerevisiae EC1118]
          Length = 399

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   +   +K + +P +  K        ++ EA  +E  Y
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEK--------IVTEAVEIEQRY 310

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NF
Sbjct: 311 FLDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNF 368

Query: 120 FETRVTEYQQGA 131
           FE RV++YQ+  
Sbjct: 369 FEKRVSDYQKAG 380


>gi|151945057|gb|EDN63308.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae YJM789]
 gi|190409471|gb|EDV12736.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae RM11-1a]
 gi|256271075|gb|EEU06176.1| Rnr2p [Saccharomyces cerevisiae JAY291]
          Length = 399

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 370 EKRVSDYQKAG 380


>gi|323308423|gb|EGA61668.1| Rnr2p [Saccharomyces cerevisiae FostersO]
          Length = 399

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 370 EKRVSDYQKAG 380


>gi|207343947|gb|EDZ71248.1| YJL026Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 399

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 370 EKRVSDYQKAG 380


>gi|156387377|ref|XP_001634180.1| predicted protein [Nematostella vectensis]
 gi|156221260|gb|EDO42117.1| predicted protein [Nematostella vectensis]
          Length = 341

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +   +L  K  ++  R ++ +A ++E  + 
Sbjct: 204 MPGLTFSNELISRDEGLHCDFAC-------LMYKYLVNKPDEETVRGIIKDAVVIEQEFL 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++F+A+R    +  + ++   ENPF +M E I L+ + NFF
Sbjct: 257 TSALPVKLIGMNCALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFF 314

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 315 EKRVGEYQKSG 325


>gi|15826569|pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer
          Length = 419

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   +   +K + +P +  K        ++ EA  +E  Y
Sbjct: 279 MPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEK--------IVTEAVEIEQRY 330

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NF
Sbjct: 331 FLDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNF 388

Query: 120 FETRVTEYQQGA 131
           FE RV++YQ+  
Sbjct: 389 FEKRVSDYQKAG 400


>gi|323347997|gb|EGA82256.1| Rnr2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 399

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 370 EKRVSDYQKAG 380


>gi|321476700|gb|EFX87660.1| hypothetical protein DAPPUDRAFT_306462 [Daphnia pulex]
          Length = 378

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++   +++ A  +E  + 
Sbjct: 239 MPGLTFSNELISRDEGLHTDFACVMFK-------HLVNKPPKERIIEIINNAVKIEQEFL 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G   L+  +ENPF +M E I L+ + NFF
Sbjct: 292 TDALPVEMIGMNCRLMRQYIEFVADRLLLELGCTKLYN-SENPFDFM-EHISLEGKTNFF 349

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 350 EKKVGEYQKAG 360


>gi|115387427|ref|XP_001211219.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
 gi|114195303|gb|EAU37003.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
          Length = 401

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q    ++ EA  +E  + 
Sbjct: 255 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVAIEKEFL 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G    F  T NPF +M E I L  + NFF
Sbjct: 308 TDALPVALLGMNSKLMCQYIEFVADRLLVALGNNKYFHST-NPFDFM-ESISLAGKTNFF 365

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 366 EKRVGDYQKAG 376


>gi|37551487|gb|AAQ93139.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|38348909|gb|AAR17885.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|88900660|gb|ABD57572.1| VACV040 [Vaccinia virus]
 gi|90819703|gb|ABD98513.1| VACV-DUKE-051 [Vaccinia virus]
          Length = 319

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R ++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRYIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|172448|gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) [Saccharomyces
           cerevisiae]
          Length = 399

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 370 EKRVSDYQKAG 380


>gi|307110551|gb|EFN58787.1| hypothetical protein CHLNCDRAFT_34102 [Chlorella variabilis]
          Length = 335

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  +  +++   ++ +A  +E  + 
Sbjct: 195 MPGLTFSNELISRDEGLHTDFACLLYR-------HIHNRLSEERVAEIVTQAVEIEKEFI 247

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G  P      NPF WM E+I L+ + NFF
Sbjct: 248 CDALPVDLIGMNSRLMGQYIEFVADRLLVALG-NPKVYNVSNPFDWM-ELISLQGKTNFF 305

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 306 EKRVGDYQKAG 316


>gi|1808636|emb|CAA64118.1| G4L protein [Cowpox virus]
          Length = 319

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  ++++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVKSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|255658865|ref|ZP_05404274.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
 gi|260849270|gb|EEX69277.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
          Length = 347

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++  ++ E P L+T E ++  R M+ E    EIA+ 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRNILRDLRAEEPDLFTPEREEMMREMIREGVRQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GLN    E Y+ ++ N R   IGL  L++ + E P    W+S+  +    K
Sbjct: 267 KYAIGNEVEGLNEKMIEDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +F E R T Y +   L
Sbjct: 327 TDFIEGRSTAYAKSTAL 343


>gi|197322443|ref|YP_002154716.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
 gi|197130510|gb|ACH46846.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
          Length = 342

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+      I RDE LH    + + N +K   P     +       +  +AT +E  +  E
Sbjct: 207 GLCFANSLIARDEGLHAEGSVMIYNHLKHRLPVAVVHD-------IFGQATTIEKEFIRE 259

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +G+NA +   Y+++I++    ++G   LF  ++NPF WM+ +I ++ + NFFE 
Sbjct: 260 ALPVSLIGINAGTMSTYIEYISDFWLEKLGYPKLFN-SKNPFEWMT-MIGMEGKSNFFEG 317

Query: 123 RVTEYQQGAGL 133
           RV EY +   +
Sbjct: 318 RVAEYSKAGSM 328


>gi|21492474|ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus]
          Length = 321

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K    +       +    ++ EA  +E  + 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSN-------EIITIIIKEAVSIEKEFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++FIA+R   ++G + +F  + NPF +M E I L+ + NFF
Sbjct: 237 TNIIPVKLIGMNCDLMSQYIEFIADRLLLELGCDKVF-MSINPFDFM-ENISLEGKTNFF 294

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 295 EKRVSEYQK 303


>gi|159030376|emb|CAO91271.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 355

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I +     PH   + ++     M   A   E  + 
Sbjct: 215 MSGSADVFKMINRDELSHVRLYQKLIPEAMAIFPHSVEQIYE-----MFDSAVKHECCWT 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE- 116
           +  +    +G+   S EQY +++AN R   IGLEPL+   KY ++P+  +    D KKE 
Sbjct: 270 NHIVGNDILGITEYSTEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEG 329

Query: 117 ---KNFFETRVTEYQQGAGLK-WD 136
               NFFE  VT Y   +GL  WD
Sbjct: 330 HTKANFFEATVTSYVMSSGLTGWD 353


>gi|328855581|gb|EGG04707.1| hypothetical protein MELLADRAFT_49061 [Melampsora larici-populina
           98AG31]
          Length = 385

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++   PH          + ++ +A  +E  + 
Sbjct: 236 MPGLTFSNELISRDEGLHTDFACLLFSHLE-RRPH------PDTVQAIISQAVEIEKEFL 288

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +   ENPF +M E+I L  + NFF
Sbjct: 289 SDALPCKLIGMNADLMCQYIEFVADRLLVALGNDKFYN-AENPFDFM-EMISLSGKTNFF 346

Query: 121 ETRVTEYQQGA 131
           E RV++Y +  
Sbjct: 347 EKRVSDYAKAG 357


>gi|190896550|gb|ACE96788.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLAFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|119360103|gb|ABL66780.1| At5g40942 [Arabidopsis thaliana]
          Length = 231

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 6/108 (5%)

Query: 28  QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 83
           QI IEN H    L TK  + + + ++ +A  +E  +  + +    VG+N     QY++F+
Sbjct: 103 QIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQYIEFV 162

Query: 84  ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 131
           A+R    +G   ++  T NPF WM E+I L+ + NFFE RV EYQ+ +
Sbjct: 163 ADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKAS 208


>gi|306819883|ref|ZP_07453537.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
 gi|304552130|gb|EFM40067.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
          Length = 347

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     ++ ++K E  H++T+E     R M+ +    EI +A
Sbjct: 207 MPGTVQEIRYINRDENTHLWLFRSILLELKKEEAHIFTQENINLFRNMIKQGVEEEIRWA 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GL+    E Y++++ N RC  +G + +++ Y + P    W+SE  D    K
Sbjct: 267 KYAIGDNIQGLSMSMIEDYLKYLGNLRCKGLGFDNIYEGYEKEPESMSWVSEYSDPNAIK 326

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE +V+ Y +   ++ D
Sbjct: 327 TDFFEAKVSAYAKSTVIEDD 346


>gi|254303614|ref|ZP_04970972.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148323806|gb|EDK89056.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 344

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 8/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+ 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEIAWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E   
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 320

Query: 117 -KNFFETRVTEYQQGAGL 133
             NFFE  VT Y   + +
Sbjct: 321 KSNFFEGTVTSYNMSSSI 338


>gi|39977011|ref|XP_369893.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
 gi|145016179|gb|EDK00669.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
          Length = 403

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +    P+      ++  + ++ +A  +E  + 
Sbjct: 248 MPGLTFSNELISRDEGLHTDFACLLFSLLN-NRPN------KEVVKEIVVDAVKIEQEFL 300

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFF
Sbjct: 301 TEALPCALLGMNANLMKQYIEFVADRLLVALGNEKVYRAT-NPFDFM-ENISLGGKTNFF 358

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 359 EKRVGEYQKAG 369


>gi|312599293|gb|ADQ91316.1| hypothetical protein BpV2_149c [Bathycoccus sp. RCC1105 virus BpV2]
          Length = 387

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 68/127 (53%), Gaps = 9/127 (7%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE +H  F +++ N +K        K   +    ++ +A  +E  +  +
Sbjct: 256 GLCFSNELISRDEGMHQEFAVELFNMLK-------NKPSGEIIEEIIRDAVTIEKEFITD 308

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +G+N+    +Y++++A+R   Q+G + ++  T+NPF +M E I L  + NFFE 
Sbjct: 309 ALPCSLIGMNSSKMSEYIEYVADRLSKQVGHDKIWN-TKNPFDFM-ENISLDGKTNFFEK 366

Query: 123 RVTEYQQ 129
           RV +Y +
Sbjct: 367 RVGDYGK 373


>gi|331245491|ref|XP_003335382.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
 gi|309314372|gb|EFP90963.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 380

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   ++   PH          + ++ +A  +E  + 
Sbjct: 231 MPGLTFSNELISRDEGLHTDFACLLFTHLE-RRPH------PDTVQAIIAQAVEIEKEFL 283

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T NPF +M E+I L  + NFF
Sbjct: 284 SDALPCKLIGMNADLMCQYIEFVADRLLVALGNEKFYNAT-NPFDFM-EMISLSGKTNFF 341

Query: 121 ETRVTEYQQGA 131
           E RV++Y +  
Sbjct: 342 EKRVSDYAKAG 352


>gi|224007863|ref|XP_002292891.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971753|gb|EED90087.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 297

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 10/137 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +++  + P       + +   ++  A  +E  + 
Sbjct: 160 MPGLCFSNELISRDEGLHCDFACLLYSKLVNKLP-------ESRITKIITVAVEIEKEFV 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+     Y++F A+R    +G    +  T NPF WM E+I L+ + NFF
Sbjct: 213 SDALPVELIGMNSKLMCDYIEFCADRLLGALGCSKFYNAT-NPFEWM-EMISLQGKTNFF 270

Query: 121 ETRVTEY-QQGAGLKWD 136
           E RV EY + G G+  D
Sbjct: 271 EKRVGEYAKSGVGVNKD 287


>gi|304321610|ref|YP_003855253.1| ribonucleoside-diphosphate reductase subunit beta [Parvularcula
           bermudensis HTCC2503]
 gi|303300512|gb|ADM10111.1| ribonucleoside-diphosphate reductase, beta subunit [Parvularcula
           bermudensis HTCC2503]
          Length = 340

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    + + ++   E   L T                LE  + 
Sbjct: 186 MKGMGQIVTWSIRDESLHCEGMVRLFHEFARETGAL-TPAVADDIVDCCKTVVDLEDKFI 244

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     + Y++ IA+ R  Q+GL P+F    +P PW+ E+++  +  NF
Sbjct: 245 ELAFEAGEVEGMTPDDIKAYIRHIADWRLSQLGLPPVFAADNHPLPWLREILNGVEHANF 304

Query: 120 FETRVTEYQQGA 131
           FE R TEY +GA
Sbjct: 305 FEARATEYSKGA 316


>gi|255037048|ref|YP_003087669.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
 gi|254949804|gb|ACT94504.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
          Length = 331

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH  F   +  +      H+  +  Q++   ++ +A  +E  + 
Sbjct: 189 MPGLSFSNELISRDEGLHCEFACLLYTK------HILNQLPQERVIEIMLDAVEIEKEFV 242

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA   +QY+++IA+    ++G    F  + NPF +M E+I L  + NFF
Sbjct: 243 SEALPVSLIGMNADLMKQYIEYIADFWLERLGCPKQFG-SANPFDFM-ELISLPGKTNFF 300

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 301 EKRVGEYQKAG 311


>gi|109287926|ref|YP_654620.1| hypothetical protein MIV048L [Invertebrate iridescent virus 3]
 gi|123878658|sp|Q197B2|RIR2_IIV3 RecName: Full=Probable ribonucleoside-diphosphate reductase small
           subunit 048L; AltName: Full=Ribonucleotide reductase
           small subunit
 gi|106073549|gb|ABF82078.1| hypothetical protein MIV048L [Aedes taeniorhynchus iridescent
           virus]
          Length = 376

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIEN-PHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 67
           Q+ + DE+ H N  +++ + + +EN  H+     + + R    +   LE  +       G
Sbjct: 245 QWSIADETHHTNSMMELFSTLVVENKSHIRLGVLEARVRDTARKIVQLEDGFIDLAFSMG 304

Query: 68  -FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 126
               L A   + Y+++I NRR   +G  PL+   ENP PW+ ++++     NFFE + TE
Sbjct: 305 EMRQLTADDVKSYIRYITNRRLQTMGYLPLYSVVENPLPWVEDLLNAPSHTNFFENKPTE 364

Query: 127 YQQGA 131
           Y + +
Sbjct: 365 YAKAS 369


>gi|18640102|ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
 gi|18448509|gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
          Length = 320

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++   +++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSKEVITSIIIDAVNIEKEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++F+A+R   ++G E +F    NPF +M E I L+ + NFF
Sbjct: 236 TVAIPVDLIGMNCCLMSQYIEFVADRLLTELGCEKVFN-VYNPFSFM-EYISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 294 ERRVSEYQK 302


>gi|322378346|ref|ZP_08052803.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
 gi|322379688|ref|ZP_08054002.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321147887|gb|EFX42473.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321149232|gb|EFX43675.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
          Length = 342

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL+   ++IN ++ E   L++ E   +   M  +A  LE A+ 
Sbjct: 206 MLGSAQMIRFIQRDELTHLHLFQNMINTLRKERSDLFSPELIAEVNEMFKQAVDLESAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   + L+      Y +++A+ R   +GL  L+  ++NP  W+ +  +    + NF
Sbjct: 266 AYITQGEMLDLSPQILRTYTEYLADTRLAVVGLPKLYN-SQNPIKWVDQFANFNSHRSNF 324

Query: 120 FETRVTEYQQGA 131
           FE +V+ Y +G+
Sbjct: 325 FEAKVSNYSKGS 336


>gi|297745764|emb|CBI15820.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I R E LH +F   + + ++ + P  W     QK   ++HEA  +E  + 
Sbjct: 129 MPGLTFSNELISRYEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAMEIETQFI 181

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+ A     Y++F+ +R    +G E  +   ENPF WM E I L+   NFF
Sbjct: 182 CEALPCALIGMKATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFF 239

Query: 121 ETRVTEYQQGA 131
           + R+ +YQ+ +
Sbjct: 240 QRRMGDYQKAS 250


>gi|253582918|ref|ZP_04860136.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
 gi|251835124|gb|EES63667.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
          Length = 348

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  + I RDE  H+     ++ +I+ ENP  +  E   +   M  +A   EI + 
Sbjct: 208 MMGTSDIIRLINRDELSHVVIFQHLLKEIRNENPDFFNDE---EIYDMFRKAVEQEINWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
           +  +    +G+   + EQY +++AN R   IGL+P++  + +NP+  +++  D + E   
Sbjct: 265 NHIIGNQILGITEETTEQYTKWLANERLRSIGLKPIYDGFNKNPYKHLTKFADTEGEGNV 324

Query: 117 -KNFFETRVTEYQQGAGLK-WD 136
             NFFE  VT Y   + +  WD
Sbjct: 325 KANFFEGTVTSYNMSSSIDGWD 346


>gi|225684487|gb|EEH22771.1| ribonucleoside-diphosphate reductase small chain A
           [Paracoccidioides brasiliensis Pb03]
          Length = 413

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++    H  + E  QK   ++ EA  +E  + 
Sbjct: 262 MPGLTFSNELISRDEGLHTDFACLLFSHLR----HRPSPEAVQK---IITEAVAIEQEFL 314

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M   I L  + NFF
Sbjct: 315 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLTGKTNFF 372

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 373 EKRVGDYQKAG 383


>gi|156386903|ref|XP_001634150.1| predicted protein [Nematostella vectensis]
 gi|156221230|gb|EDO42087.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +   +L  K  ++  R ++ +A ++E  + 
Sbjct: 247 MPGLTFSNELISRDEGLHCDFAC-------LMYKYLVNKPDEETVRGIIKDAVVIEQEFL 299

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++F+A+R    +  + ++   ENPF +M E I L+ + NF+
Sbjct: 300 TSALPVKLIGMNCALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFY 357

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+  
Sbjct: 358 EKRVGEYQKSG 368


>gi|67921622|ref|ZP_00515140.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
 gi|67856734|gb|EAM51975.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
          Length = 321

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I + +   PH   + ++     M   A   E  + 
Sbjct: 181 MPGSADIFKMINRDELSHVRLYQKLIPEARKVFPHSVEQIYE-----MFDMAVNYECRWT 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK-- 115
           +  +    +G+   S E+Y +++AN R   IGLEPL+   KY+++P+  +    D KK  
Sbjct: 236 NHIVGNNILGITESSTEKYTKYLANIRLRSIGLEPLYPEPKYSKSPYTHLERFSDTKKAA 295

Query: 116 --EKNFFETRVTEYQQGAGLK-WD 136
             + NFFE  VT Y   +GL  WD
Sbjct: 296 HTKANFFEATVTSYVMSSGLTGWD 319


>gi|254796877|ref|YP_003081714.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           risticii str. Illinois]
 gi|254590113|gb|ACT69475.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           risticii str. Illinois]
          Length = 286

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 9/141 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK---EFQQKSRTMLH-EATLLE 56
           M G+ +   Y +RDE+LH N    +     +EN     K   E ++    M+H E   ++
Sbjct: 142 MKGMGQIIAYSVRDETLHSNSITKLFRTFLLENDIDKLKLEAEIREICDAMVHHEDAFID 201

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 116
           +A+    +     GL A   ++Y+++IAN R  Q+G   +++   NP  W+  V++  + 
Sbjct: 202 LAFEMGDVE----GLKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEH 257

Query: 117 KNFFETRVTEYQQGAGL-KWD 136
            NFFE + TEY + A    WD
Sbjct: 258 TNFFENKATEYSKAATKGTWD 278


>gi|223996990|ref|XP_002288168.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975276|gb|EED93604.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 10/137 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +++  + P       + +   ++  A  +E  + 
Sbjct: 198 MPGLCFSNELISRDEGLHCDFACLIYSKLVNQLP-------ESRIEEIITNAVEIEKEFV 250

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F A+R    +G +  +    NPF WM E+I L+ + NFF
Sbjct: 251 SDALPVELIGMNSKLMCQYIEFCADRLLGALGCKKHYMAV-NPFEWM-EMISLQGKTNFF 308

Query: 121 ETRVTEY-QQGAGLKWD 136
           E RV EY + G G+  D
Sbjct: 309 EKRVGEYAKSGVGVNKD 325


>gi|331083185|ref|ZP_08332301.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
 gi|330404574|gb|EGG84114.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
          Length = 347

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I Q+K E P L+TKE  Q  + ML E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK 117
           H  +     G++     +Y++++ N R   +G + ++  Y + P    W+S   +    K
Sbjct: 267 HYVLGDDIPGISKEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y +   L
Sbjct: 327 TDFFEAKSTAYAKSTAL 343


>gi|320527966|ref|ZP_08029132.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
 gi|320131592|gb|EFW24156.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
          Length = 349

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDES HL    +++ +++ E P L+T E  Q  R M++     EIA+ 
Sbjct: 209 MPGSVQEIRYINRDESTHLWLFRNILVELQKEEPELFTPENIQMIREMMNTGVEQEIAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK 117
           H  +     GLN      Y++++ N R   +G   L+ +Y E P    W+ +  D    K
Sbjct: 269 HYVIGDEIPGLNKQMVTDYIKYLGNTRFATLGFGNLYEEYAEEPESMKWVKQYSDANMVK 328

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE R + Y +   ++ D
Sbjct: 329 TDFFEARPSAYAKSGAIEDD 348


>gi|284929768|ref|YP_003422290.1| ribonucleotide reductase, subunit beta [cyanobacterium UCYN-A]
 gi|284810212|gb|ADB95909.1| ribonucleotide reductase, beta subunit [cyanobacterium UCYN-A]
          Length = 354

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I + +   PH   + ++     M   A   E  + 
Sbjct: 214 MPGSADIFKMINRDELSHVRLYQKLIPEARKVFPHSTEQIYE-----MFDTAVNHECRWT 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE- 116
           +  +    +G+   S EQY +++AN R   IGLEPL+   ++T++P+  +    D KK+ 
Sbjct: 269 NHIVGSNILGITESSTEQYTKYLANIRLRSIGLEPLYTGEEFTKSPYSHLERFSDTKKDG 328

Query: 117 ---KNFFETRVTEYQQGAGLK-WD 136
               NFFE+ VT Y   +G+  WD
Sbjct: 329 HTKANFFESTVTSYVMSSGVSGWD 352


>gi|313235850|emb|CBY19835.1| unnamed protein product [Oikopleura dioica]
          Length = 382

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +   H+  K  Q++   ++ +A  +E  + 
Sbjct: 239 MPGVTFSNELISRDEGLHTDFAC-------LMYKHMVQKPSQEQIIAIIRDAVSIEQEFL 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    + Y++F+A+R   ++    ++K  ENPF +M E+I L+ + NFF
Sbjct: 292 TDALPVRLIGMNCDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFF 349

Query: 121 ETRVTEYQQGA 131
           E +V+EY +  
Sbjct: 350 EKKVSEYARAG 360


>gi|156545974|ref|XP_001606963.1| PREDICTED: similar to ENSANGP00000013211 [Nasonia vitripennis]
          Length = 388

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K  +++  +++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFK-------HIVQKPSEERVISIIKDAVTIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G   ++  +ENPF +M E I L+ + NFF
Sbjct: 302 TDALPVEMIGMNCRLMCQYIEFVADRLLGELGCPKVYN-SENPFDFM-EHISLEGKTNFF 359

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 360 EKKVGEYQK 368


>gi|56555145|gb|AAV98100.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 328

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 8/121 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    ++I RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  +   
Sbjct: 216 GLTSSNEFISRDEGLHRDFACMLLKKGFVDTPS------RERILEIVTEAVRIEQEFLTV 269

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   VG+N     QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFFE 
Sbjct: 270 SLPVKLVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMDN-ISLENKTNFFEK 327

Query: 123 R 123
           R
Sbjct: 328 R 328


>gi|146090952|ref|XP_001466403.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|321399462|emb|CBZ08664.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 392

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + N H+  K  +++   ++ +A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFF
Sbjct: 307 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFF 364

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 365 EKKVGEYQKAG 375


>gi|209972895|ref|YP_002300342.1| gp4 [Bacillus phage SPO1]
 gi|209871215|gb|ACI90971.1| gp4 [Bacillus phage SPO1]
          Length = 346

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +    YI RDE  H  F   V+  +  E P L T+E       M+ EA  LEI Y+
Sbjct: 206 MVGTSTMINYIQRDEVAHAYFFSQVLRYLMAERPELHTEENVNFIYDMMQEAADLEIEYS 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
            + +     GL+    E Y++ + NRR   +GL+ ++   EN  PWM
Sbjct: 266 QKIL-HDIPGLDLEELEGYIKSLCNRRLRGVGLDDIYAGVENSMPWM 311


>gi|260589755|ref|ZP_05855668.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
 gi|260539995|gb|EEX20564.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
          Length = 359

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I Q+K E P L+TKE  Q  + ML E    EIA+ 
Sbjct: 219 MPGSAQEIRYINRDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWG 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK 117
           H  +     G++     +Y++++ N R   +G + ++  Y + P    W+S   +    K
Sbjct: 279 HYVLGDDIPGISKEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVK 338

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y +   L
Sbjct: 339 TDFFEAKSTAYAKSTAL 355


>gi|313213932|emb|CBY40745.1| unnamed protein product [Oikopleura dioica]
          Length = 418

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +   H+  K  Q++   ++ +A  +E  + 
Sbjct: 275 MPGVTFSNELISRDEGLHTDFAC-------LMYKHMVQKPSQEQIIAIIRDAVSIEQEFL 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    + Y++F+A+R   ++    ++K  ENPF +M E+I L+ + NFF
Sbjct: 328 TDALPVRLIGMNCDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFF 385

Query: 121 ETRVTEYQQGA 131
           E +V+EY +  
Sbjct: 386 EKKVSEYARAG 396


>gi|146090970|ref|XP_001466408.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|134070770|emb|CAM69127.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 388

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + N H+  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFI 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFF
Sbjct: 303 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFF 360

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 361 EKKVGEYQKAG 371


>gi|67515571|ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|40746089|gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|259489743|tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8]
           [Aspergillus nidulans FGSC A4]
          Length = 406

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  F  T NPF +M E I L  + NFF
Sbjct: 310 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKYFNAT-NPFDFM-ESISLAGKTNFF 367

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 368 EKRVGDYQKAG 378


>gi|295670491|ref|XP_002795793.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
 gi|226284878|gb|EEH40444.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
          Length = 325

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++    H  + E  QK   ++ EA  +E  + 
Sbjct: 174 MPGLTFSNELISRDEGLHTDFACLLFSHLR----HRPSPEAVQK---IITEAVAIEQEFL 226

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M   I L  + NFF
Sbjct: 227 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLTGKTNFF 284

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 285 EKRVGDYQKAG 295


>gi|119485472|ref|ZP_01619800.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
 gi|119457228|gb|EAW38354.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
          Length = 359

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I +     PH   + ++     M   A   E  + 
Sbjct: 219 MPGSADIFKMINRDELSHVRLYQKLIPEAMQTFPHSVEQIYE-----MFDTAVQHECRWT 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE- 116
           +  + +  +G+   S EQY +++AN R   IGL+PL+   +Y+++P+  +    D KKE 
Sbjct: 274 NHIVGRNILGITETSTEQYTKYLANARLRSIGLKPLYTDPRYSKSPYTHLERFSDTKKEA 333

Query: 117 ---KNFFETRVTEYQQGAGL-KWD 136
               NFFE  VT Y   +G+  WD
Sbjct: 334 HTKANFFEASVTSYVMSSGVGGWD 357


>gi|226294144|gb|EEH49564.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb18]
          Length = 325

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++    H  + E  QK   ++ EA  +E  + 
Sbjct: 174 MPGLTFSNELISRDEGLHTDFACLLFSHLR----HRPSPEAVQK---IITEAVAIEQEFL 226

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M   I L  + NFF
Sbjct: 227 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLTGKTNFF 284

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 285 EKRVGDYQKAG 295


>gi|68304258|ref|YP_249726.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
 gi|67973087|gb|AAY84053.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
          Length = 318

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 7/131 (5%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F     N+   E   L     + K  +M  EA  +E  +   
Sbjct: 184 GLTYSNELISRDEGLHTDFACLYYNKYIPEKNKLS----KTKVLSMFVEAVDIEKDFFTN 239

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +G+N+ S  +Y++F+A+R   ++G +  F  T NPF +M+  I L+ + NFFE 
Sbjct: 240 ALPVAMLGMNSQSMCEYIEFVADRLLFELGYDKHFN-TANPFEFMNN-ISLEGKTNFFEK 297

Query: 123 RVTEYQQ-GAG 132
           RV EY++ GA 
Sbjct: 298 RVGEYKRFGAA 308


>gi|297209|emb|CAA48969.1| C8L [Variola virus]
 gi|745144|prf||2015436AF C8L gene
          Length = 333

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFF
Sbjct: 250 TVALPVKLIGMNCEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFF 307

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 308 EKRVGEYQK 316


>gi|544843|gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa]
          Length = 333

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFF
Sbjct: 250 TVALPVKLIGMNCEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFF 307

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 308 EKRVGEYQK 316


>gi|314055235|ref|YP_004063573.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
 gi|313575126|emb|CBI70139.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
          Length = 408

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F +++   ++        +   +    ++ EA  +E  + 
Sbjct: 275 MPGLCFSNELISRDEGLHQEFAVELFKTLR-------NRPTTETIHAIVKEAVEIEKGFI 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++++++R   Q+G+ P++   +NPF +M E I L  + NFF
Sbjct: 328 LDALPCNLIGMNSEKMSEYIEYVSDRLLKQVGVPPIWN-AKNPFDFM-ENISLDGKTNFF 385

Query: 121 ETRVTEY 127
           E RV +Y
Sbjct: 386 EKRVGDY 392


>gi|126654703|ref|ZP_01726237.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
 gi|126623438|gb|EAZ94142.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
          Length = 352

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I + +   PH   + ++     M   A   E  + 
Sbjct: 212 MPGSADIFKMINRDELSHVRLYQKLIPEARKVFPHSVEQIYE-----MFDMAVNYECRWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE- 116
           +  +    +G+   S E+Y +++AN R   IGLEPL+   KY ++P+  +    D KKE 
Sbjct: 267 NHIVGNNILGITESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEA 326

Query: 117 ---KNFFETRVTEYQQGAGLK-WD 136
               NFFE  VT Y   +G+  WD
Sbjct: 327 HTKANFFEATVTSYVMSSGVTGWD 350


>gi|50286273|ref|XP_445565.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524870|emb|CAG58476.1| unnamed protein product [Candida glabrata]
          Length = 400

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K   +    ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLNHKPDPEVVERIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G + ++   ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNAQLMNQYVEFVADRLLVAFGNKKVYN-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 370 EKRVSDYQKAG 380


>gi|306478720|ref|NP_042072.2| Ribonucleoside-diphosphate reductase small chain [Variola virus]
 gi|464615|sp|P33799|RIR2_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 319

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|11878241|gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans]
          Length = 406

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  F  T NPF +M E I L  + NFF
Sbjct: 310 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKEYFNAT-NPFDFM-ESISLAGKTNFF 367

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 368 EKRVGDYQKAG 378


>gi|45184688|ref|NP_982406.1| AAL136Cp [Ashbya gossypii ATCC 10895]
 gi|44980034|gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895]
          Length = 422

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K   +    ++ EA  +E  Y 
Sbjct: 280 MPGLTFSNELICRDEGLHTDFACLLF-------AHLNNKPDTEIVEKIITEAVEIEKRYF 332

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  + NPF +M E I L  + NFF
Sbjct: 333 QDAIPVALLGMNSSLMNQYVEFVADRLLVALGNKKYYNVS-NPFDFM-ENISLAGKTNFF 390

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 391 EKRVSDYQKAG 401


>gi|225561749|gb|EEH10029.1| ribonucleotide reductase M2 B [Ajellomyces capsulatus G186AR]
 gi|240275354|gb|EER38868.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H143]
 gi|325091193|gb|EGC44503.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H88]
          Length = 413

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +   +    ++ EA  +E  + 
Sbjct: 262 MPGLTFSNELISRDEGLHTDFACLLFS-------HLRHRPSPEAVEKIITEAVTIEQEFL 314

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M   I L  + NFF
Sbjct: 315 SDALPVALLGMNAKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLAGKTNFF 372

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 373 EKRVGDYQKAG 383


>gi|172036555|ref|YP_001803056.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
 gi|171698009|gb|ACB50990.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
          Length = 352

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I + +   PH   + ++     M   A   E  + 
Sbjct: 212 MPGSADIFKMINRDELSHVRLYQKLIPEARKVFPHSVEQIYE-----MFDMAVNYECRWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE- 116
           +  +    +G+   S E+Y +++AN R   IGLEPL+   KY ++P+  +    D KKE 
Sbjct: 267 NHIVGNNILGITESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEA 326

Query: 117 ---KNFFETRVTEYQQGAGLK-WD 136
               NFFE  VT Y   +G+  WD
Sbjct: 327 HTKANFFEATVTSYVMSSGVTGWD 350


>gi|15606660|ref|NP_214040.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
 gi|18202109|sp|O67475|RIR2_AQUAE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit;
           Contains: RecName: Full=Aae nrdB intein; AltName:
           Full=Aae RIR2 intein
 gi|2983879|gb|AAC07431.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
          Length = 696

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 2/122 (1%)

Query: 16  SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPS 75
           + H+    ++IN ++ ENP L+T E ++        A   EI +         +G+N   
Sbjct: 575 NCHVTLFRNIINTLRKENPELFTPEIEKWIVEYFKYAVNEEIKWGQYVTQNQILGINDVL 634

Query: 76  CEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFETRVTEYQQGAGL 133
            E+Y++++ N R  QIG +P++ + TENP  W+ E   +   K +FF+ +   Y +   L
Sbjct: 635 IERYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQTYSKANEL 694

Query: 134 KW 135
           KW
Sbjct: 695 KW 696


>gi|155122339|gb|ABT14207.1| hypothetical protein MT325_M653L [Paramecium bursaria chlorella
           virus MT325]
          Length = 326

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  FG  + +  K+EN     K    + + ++ EA   E  + 
Sbjct: 190 MPGLGLSNEFISRDEGLHQQFGELLYS--KLEN-----KLSLAQVKAIVEEAVANEKEFI 242

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+    QY++F+A+R    +G    +  T NPF +M E+I L+ + NFF
Sbjct: 243 CEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFF 300

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 301 ERRVSEYQR 309


>gi|254572986|ref|XP_002493602.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|238033401|emb|CAY71423.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|328354568|emb|CCA40965.1| ribonucleoside-diphosphate reductase subunit M2 [Pichia pastoris
           CBS 7435]
          Length = 400

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLFS-------HLNNRASEEIVEKIITEAVEIEKRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G + ++    NPF +M E I L  + NFF
Sbjct: 312 TDALPVSLLGMNCSLMCQYVEFVADRLLVALGNKKVYN-VNNPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 370 EKRVSDYQKAG 380


>gi|110763195|ref|XP_397443.3| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
           1 [Apis mellifera]
          Length = 384

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I ++ P        ++  +++ +A  +E  + 
Sbjct: 247 MPGLTFSNELISRDEGLHCDFACLMFKHI-VQKPSC------ERVTSIIKDAVKIEQEFL 299

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G + ++  +ENPF +M E I L+ + NFF
Sbjct: 300 TDALPVEMIGMNCKLMCQYIEFVADRLLVELGCKKIY-MSENPFDFM-EHISLEGKTNFF 357

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 358 EKKVGEYQK 366


>gi|261189551|ref|XP_002621186.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239591422|gb|EEQ74003.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239613047|gb|EEQ90034.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis ER-3]
 gi|327356917|gb|EGE85774.1| ribonucleotide reductase M2 B [Ajellomyces dermatitidis ATCC 18188]
          Length = 413

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +   +    ++ EA  +E  + 
Sbjct: 262 MPGLTFSNELISRDEGLHTDFACLLFS-------HLRHRPSPEAVERIITEAVTIEQEFL 314

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M   I L  + NFF
Sbjct: 315 SDALPVALLGMNAKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMDN-ISLAGKTNFF 372

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 373 EKRVGDYQKAG 383


>gi|307151334|ref|YP_003886718.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
 gi|306981562|gb|ADN13443.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
          Length = 355

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I +     PH   K ++     M   A   E  + 
Sbjct: 215 MPGSADIFKMINRDELSHVRLYQKIIAEAMQTFPHSVDKVYE-----MFDTAVHHECRWT 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE- 116
           +  +    +G+   S EQY +++AN R   IGL+PL+   KY ++P+  +    D KK+ 
Sbjct: 270 NHIVGDNILGITESSTEQYTKYLANIRLKAIGLKPLYADEKYQKSPYSHLERFSDTKKDA 329

Query: 117 ---KNFFETRVTEYQQGAGLK-WD 136
               NFFE  VT Y   +G+  WD
Sbjct: 330 HTKANFFEATVTSYVMSSGVTGWD 353


>gi|212693366|ref|ZP_03301494.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|237710423|ref|ZP_04540904.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
 gi|237726931|ref|ZP_04557412.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           D4]
 gi|212664010|gb|EEB24584.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|229433787|gb|EEO43864.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           dorei 5_1_36/D4]
 gi|229455145|gb|EEO60866.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
          Length = 349

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI + 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKK 115
              +     GLN    E Y+Q++ N R   +G  PL  Y EN        W+S+  +   
Sbjct: 269 QYVIGDNIQGLNRKMIEDYIQYLGNLRWSSLGFGPL--YEENHKEPESMHWVSQYSNANM 326

Query: 116 EK-NFFETRVTEYQQGAGLKWD 136
            K +FFE + T Y +   L+ D
Sbjct: 327 VKTDFFEAKSTAYAKSTALEDD 348


>gi|155370749|ref|YP_001426283.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
 gi|155124069|gb|ABT15936.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
          Length = 348

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  FG  + +  K+EN     K    + + ++ EA   E  + 
Sbjct: 212 MPGLGLSNEFISRDEGLHQQFGELLYS--KLEN-----KLSLAQVKAIVEEAVANEKEFI 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+    QY++F+A+R    +G    +  T NPF +M E+I L+ + NFF
Sbjct: 265 CEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFF 322

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 323 ERRVSEYQR 331


>gi|237738278|ref|ZP_04568759.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
 gi|229420158|gb|EEO35205.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
          Length = 348

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  + I RDE  H+     +I +++ ENP+ + +    +   M  +A   EI++ 
Sbjct: 208 MMGTSDIIRLINRDELSHVVIFQQMIKEVQNENPNFFDENIIYE---MFEKAVEQEISWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
           +  +    +G+   + E Y +++AN R   IGL+PL++ Y +NP+  +    D + E   
Sbjct: 265 NHIIGGNILGITEKTTESYTKWLANERLKSIGLQPLYEGYEKNPYKHLERFADTEGEGNV 324

Query: 117 -KNFFETRVTEYQQGAGLK-WD 136
             NFFE  VT Y   + ++ WD
Sbjct: 325 KANFFEGTVTSYNMSSSVEGWD 346


>gi|170089003|ref|XP_001875724.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
 gi|164648984|gb|EDR13226.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
          Length = 422

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +K   PH       +  + ++ EA  +E  + 
Sbjct: 269 MPGLTFSNELISRDEGMHTDFACLLFSHLK-RRPH------PEVVKHIIVEAVKIEQEFL 321

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T NPF +M ++I L+ + NFF
Sbjct: 322 TDALPVKLIGMNADLMCQYIEFVADRLLVSLGNEKHYNKT-NPFDFM-DMISLQGKTNFF 379

Query: 121 ETRVTEYQQGA 131
           E RV++Y +  
Sbjct: 380 EKRVSDYSKAG 390


>gi|150005609|ref|YP_001300353.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           vulgatus ATCC 8482]
 gi|254884474|ref|ZP_05257184.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294778581|ref|ZP_06744003.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|319640834|ref|ZP_07995547.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
 gi|149934033|gb|ABR40731.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           vulgatus ATCC 8482]
 gi|254837267|gb|EET17576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294447530|gb|EFG16108.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|317387646|gb|EFV68512.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
          Length = 349

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI + 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKK 115
              +     GLN    E Y+Q++ N R   +G  PL  Y EN        W+S+  +   
Sbjct: 269 QYVIGDNIQGLNRKMIEDYIQYLGNLRWSSLGFGPL--YEENHKEPESMHWVSQYSNANM 326

Query: 116 EK-NFFETRVTEYQQGAGLKWD 136
            K +FFE + T Y +   L+ D
Sbjct: 327 VKTDFFEAKSTAYAKSTALEDD 348


>gi|145249942|ref|XP_001401310.1| ribonucleoside-diphosphate reductase small chain [Aspergillus niger
           CBS 513.88]
 gi|134081995|emb|CAK46680.1| unnamed protein product [Aspergillus niger]
          Length = 396

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q    ++ EA  +E  + 
Sbjct: 251 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVGIEQEFL 303

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 304 TDALPVALLGMNSKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ESISLAGKTNFF 361

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 362 EKRVGDYQKAG 372


>gi|323098445|gb|ADX22683.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R ++  A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|308490921|ref|XP_003107652.1| hypothetical protein CRE_13354 [Caenorhabditis remanei]
 gi|308250521|gb|EFO94473.1| hypothetical protein CRE_13354 [Caenorhabditis remanei]
          Length = 147

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 9/120 (7%)

Query: 10  YIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 69
           Y  RDE LH +F   + +        L  K  Q++   ++ +A  +E  +  E +P   +
Sbjct: 19  YFFRDEGLHRDFACLLYSM-------LQNKLTQERIFEIIKDAVCIEQEFLTEALPVDMI 71

Query: 70  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           G+N     QY++F+A+    ++G + L+   +NPF +M E I +  + NFFE RV+EYQ+
Sbjct: 72  GMNCRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEYQR 129


>gi|17974949|ref|NP_536463.1| C10L [Monkeypox virus Zaire-96-I-16]
 gi|17529816|gb|AAL40494.1|AF380138_36 C10L [Monkeypox virus Zaire-96-I-16]
 gi|51342196|gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus]
 gi|58220500|gb|AAW67788.1| MPXV-SL-030 [Monkeypox virus]
 gi|59858836|gb|AAX09131.1| MPXV-COP-030 [Monkeypox virus]
 gi|68448710|gb|AAY96833.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68448912|gb|AAY97034.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449113|gb|AAY97234.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449313|gb|AAY97433.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449512|gb|AAY97631.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|300872658|gb|ADK39060.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R ++  A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|154340038|ref|XP_001565976.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134063294|emb|CAM45500.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 388

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + N H+  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFI 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFF
Sbjct: 303 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFF 360

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 361 EKKVGEYQKAG 371


>gi|323098642|gb|ADX22879.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R ++  A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|312216546|emb|CBX96496.1| similar to ribonucleoside-diphosphate reductase subunit M2
           [Leptosphaeria maculans]
          Length = 410

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +        T+  ++  + ++ EA  +E  + 
Sbjct: 254 MPGLTFSNELISRDEGMHTDFACLLFSLLN-------TRPSKESVQAIITEAVEIEKEFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G    +  T NPF +M E I L  + NFF
Sbjct: 307 SDALPCALLGMNATLMCQYIEFVADRLLLSLGNTKFYNAT-NPFDFM-ENISLAGKTNFF 364

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 365 EKRVGDYQKAG 375


>gi|330921941|ref|XP_003299625.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
 gi|311326599|gb|EFQ92269.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
          Length = 410

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +         +  ++  R ++ EA  +E  + 
Sbjct: 255 MPGLTFSNELISRDEGMHTDFACLLFSLLN-------NRPSKESVRAIITEAVEIEQEFL 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G   ++  T NPF +M E I L  + NFF
Sbjct: 308 SDALPCALLGMNATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFF 365

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 366 EKRVGDYQKAG 376


>gi|88608725|ref|YP_506404.1| ribonucleotide-diphosphate reductase subunit beta [Neorickettsia
           sennetsu str. Miyayama]
 gi|88600894|gb|ABD46362.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           sennetsu str. Miyayama]
          Length = 322

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 9/141 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIEN---PHLWTKEFQQKSRTMLH-EATLLE 56
           M G+ +   Y +RDE+LH N    +     +EN         E ++    M+H E   ++
Sbjct: 178 MKGMGQIIAYSVRDETLHSNSITKLFRTFLLENNIDKFKLEAEIREICNAMVHHEDAFID 237

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 116
           +A+    +     GL A   ++Y+++IAN R  Q+G   +++   NP  W+  V++  + 
Sbjct: 238 LAFEMGDVE----GLKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEH 293

Query: 117 KNFFETRVTEYQQGAGL-KWD 136
            NFFE + TEY + A    WD
Sbjct: 294 TNFFENKATEYSKAATKGTWD 314


>gi|307192386|gb|EFN75622.1| Ribonucleoside-diphosphate reductase subunit M2 [Harpegnathos
           saltator]
          Length = 344

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 70/129 (54%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   + I+ P        ++ +T++ +A  +E  + 
Sbjct: 202 MPGLTFSNELISRDEGLHCDFACLMFKHV-IQKPSF------ERVKTIIMDAVEIEKEFL 254

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N      Y++F+A+R    +G + ++  +ENPF +M + I L+ + NFF
Sbjct: 255 TQALPVKLIGMNCTLMCTYIEFVADRLFVALGFDKVYN-SENPFSFM-DFISLEGKTNFF 312

Query: 121 ETRVTEYQQ 129
           E +V EY++
Sbjct: 313 EKKVGEYKK 321


>gi|299472857|emb|CBN80426.1| EsV-1-128 [Ectocarpus siliculosus]
          Length = 419

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 9/131 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G++     I RDE LH    + +         HL  K  Q++   +   A  +E  +   
Sbjct: 284 GLSFANSLIARDEGLHATASVLIYK-------HLRNKLPQERVHEIFEHAVSVECEFISS 336

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +G++  S  +Y++F+A+   +Q+G + ++    NPF WM ++I L+ + NFFE 
Sbjct: 337 ALPVALIGISEKSMTEYIKFVADYWLNQLGYDKVYN-CANPFEWM-DMISLQGKTNFFEN 394

Query: 123 RVTEYQQGAGL 133
           RV EY +   L
Sbjct: 395 RVAEYSKPGVL 405


>gi|3220181|gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 354

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + N H+  K  +++   ++ +A  +E  + 
Sbjct: 215 MPGLTFSNELISRDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFI 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFF
Sbjct: 269 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFF 326

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 327 EKKVGEYQKAG 337


>gi|154337607|ref|XP_001565036.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134062075|emb|CAM45178.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 392

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + N H+  K  +++   ++ +A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFF
Sbjct: 307 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFF 364

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 365 EKKVGEYQKAG 375


>gi|22549454|ref|NP_689227.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
 gi|22476633|gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
          Length = 313

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F           N  +  K   +    M  EA  +E  + 
Sbjct: 179 MPGLTFSNELISRDEGMHTDFAC------LYYNTRVNEKLSYETILDMFKEAVDIEKEFF 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    +Y++F+A+R   Q+G +P +    NPFP+M+  I L+ + NFF
Sbjct: 233 TDALPVALLGMNADMMCEYIEFVADRLLLQLG-QPKYYNARNPFPFMNN-ISLEGKTNFF 290

Query: 121 ETRVTEYQQ-GAG 132
           E RV EY+  G G
Sbjct: 291 ERRVGEYKMFGTG 303


>gi|169860861|ref|XP_001837065.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|116501787|gb|EAU84682.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 414

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +K   PH          + ++ EA  +E  + 
Sbjct: 266 MPGLTFSNELISRDEGMHTDFACLLFSHLK-RRPH------PDVVKRIITEAVAIEQEFL 318

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E ++  T NPF +M ++I L+ + NFF
Sbjct: 319 TDALPVKLIGMNAELMCQYIEFVADRLLVSLGNEKVYNST-NPFDFM-DMISLQGKTNFF 376

Query: 121 ETRVTEYQQGA 131
           E RV++Y +  
Sbjct: 377 EKRVSDYAKAG 387


>gi|168015485|ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688661|gb|EDQ75037.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 330

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +         K  + +   ++ EA ++E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACLLYTLLN-------NKLSEDRVYEIVCEAVVIEQEFV 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    VG+N     +Y+ F+A+R    +G    +  + NPF WM E+I L+ + NFF
Sbjct: 241 CEALSCDLVGMNKTLMSEYIDFVADRLLVSLGYPKKYN-SHNPFDWM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 299 EKRVGEYQKAS 309


>gi|215401283|ref|YP_002332587.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
 gi|198448783|gb|ACH88573.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
          Length = 313

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F           N  +  K   +    M  EA  +E  + 
Sbjct: 179 MPGLTFSNELISRDEGMHTDFAC------LYYNTRVNEKLSYETILDMFKEAVDIEKEFF 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    +Y++F+A+R   Q+G +P +    NPFP+M+  I L+ + NFF
Sbjct: 233 TDALPVALLGMNADMMCEYIEFVADRLLLQLG-QPKYYNARNPFPFMNN-ISLEGKTNFF 290

Query: 121 ETRVTEYQQ-GAG 132
           E RV EY+  G G
Sbjct: 291 ERRVGEYKMFGTG 303


>gi|19703451|ref|NP_603013.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19713529|gb|AAL94312.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 348

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 8/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EI + 
Sbjct: 208 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E   
Sbjct: 265 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 324

Query: 117 -KNFFETRVTEYQQGAGL 133
             NFFE  VT Y   + +
Sbjct: 325 KSNFFEGTVTSYNMSSSI 342


>gi|296329016|ref|ZP_06871523.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296153909|gb|EFG94720.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 348

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 8/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EI + 
Sbjct: 208 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E   
Sbjct: 265 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 324

Query: 117 -KNFFETRVTEYQQGAGL 133
             NFFE  VT Y   + +
Sbjct: 325 KSNFFEGTVTSYNMSSSI 342


>gi|68481406|ref|XP_715342.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|68481537|ref|XP_715277.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436893|gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436961|gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|238882096|gb|EEQ45734.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 413

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  +   +    ++ EA  +E  Y 
Sbjct: 273 MPGLTFSNELICRDEGLHTDFACLLF-------AHLQNRPSPEIVERIITEAVDVEKEYF 325

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G + ++  T NPF +M E I L  + NFF
Sbjct: 326 TDALPVSLLGMNCNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFF 383

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 384 EKRVSDYQKAG 394


>gi|241951066|ref|XP_002418255.1| ribonucleoside-diphosphate reductase small chain 1, putative;
           ribonucleotide reductase r2 subunit 1, putative;
           ribonucleotide reductase small subunit 1, putative
           [Candida dubliniensis CD36]
 gi|223641594|emb|CAX43555.1| ribonucleoside-diphosphate reductase small chain 1, putative
           [Candida dubliniensis CD36]
          Length = 413

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  +   +    ++ EA  +E  Y 
Sbjct: 273 MPGLTFSNELICRDEGLHTDFACLLF-------AHLQNRPSPEIVEKIITEAVDVEKEYF 325

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G + ++  T NPF +M E I L  + NFF
Sbjct: 326 TDALPVSLLGMNCNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFF 383

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 384 EKRVSDYQKAG 394


>gi|190896546|gb|ACE96786.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|294784669|ref|ZP_06749957.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
 gi|294486383|gb|EFG33745.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
          Length = 344

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 8/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EI + 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E   
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 320

Query: 117 -KNFFETRVTEYQQGAGL 133
             NFFE  VT Y   + +
Sbjct: 321 KSNFFEGTVTSYNMSSSI 338


>gi|256846215|ref|ZP_05551673.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
 gi|256719774|gb|EEU33329.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
          Length = 344

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 8/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EI + 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E   
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 320

Query: 117 -KNFFETRVTEYQQGAGL 133
             NFFE  VT Y   + +
Sbjct: 321 KSNFFEGTVTSYNMSSSI 338


>gi|237743586|ref|ZP_04574067.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
 gi|229432617|gb|EEO42829.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
          Length = 344

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 8/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EI + 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D + E   
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 320

Query: 117 -KNFFETRVTEYQQGAGL 133
             NFFE  VT Y   + +
Sbjct: 321 KSNFFEGTVTSYNMSSSI 338


>gi|190896532|gb|ACE96779.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896554|gb|ACE96790.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|219126374|ref|XP_002183434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405190|gb|EEC45134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 296

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 10/135 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + ++++ + P     E       ++ +A  +E  + 
Sbjct: 160 MPGLCFSNELISRDEGLHCDFACLLYSKLQNQLPVARIVE-------IITDAVTIEQEFV 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++F A+R    +G    +K   NPF WM E+I L+ + NFF
Sbjct: 213 QDALPVELIGMNSTLMCRYIEFCADRLLVALGCPKHYKAV-NPFDWM-EMISLQGKTNFF 270

Query: 121 ETRVTEY-QQGAGLK 134
           E RV EY + G G K
Sbjct: 271 EKRVGEYAKSGVGEK 285


>gi|190896508|gb|ACE96767.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896514|gb|ACE96770.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896522|gb|ACE96774.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896540|gb|ACE96783.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896542|gb|ACE96784.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|190896520|gb|ACE96773.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|322493026|emb|CBZ28311.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 388

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + N H+  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFI 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFF
Sbjct: 303 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFF 360

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 361 EKKVGEYQKAG 371


>gi|322491821|emb|CBZ27094.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 392

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + N H+  K  +++   ++ +A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFF
Sbjct: 307 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFF 364

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 365 EKKVGEYQKAG 375


>gi|190896564|gb|ACE96795.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|190896516|gb|ACE96771.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 63.9 bits (154), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|190896510|gb|ACE96768.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896556|gb|ACE96791.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896562|gb|ACE96794.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|190896538|gb|ACE96782.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896548|gb|ACE96787.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896558|gb|ACE96792.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|190896552|gb|ACE96789.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYN-VANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|189199548|ref|XP_001936111.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187983210|gb|EDU48698.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 410

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +         +   ++ R ++ EA  +E  + 
Sbjct: 255 MPGLTFSNELISRDEGMHTDFACLLFSLLN-------NRPSNEEVRAIITEAVEIEQEFL 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G   ++  T NPF +M E I L  + NFF
Sbjct: 308 SDALPCALLGMNATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFF 365

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 366 EKRVGDYQKAG 376


>gi|150863757|ref|XP_001382334.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
 gi|149385013|gb|ABN64305.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
          Length = 417

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +   +    ++ EA  +E  + 
Sbjct: 274 MPGLTFSNELICRDEGLHTDFACLLFS-------HLQNRPDAEIVEKIITEAVKIEKEFF 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M E I L  + NFF
Sbjct: 327 TDALPSSLLGMNAELMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFF 384

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 385 EKRVSDYQKAG 395


>gi|313768358|ref|YP_004062038.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
 gi|312599054|gb|ADQ91078.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
          Length = 388

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 68/127 (53%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F +++   ++        K   +   +++ EA  +E  + 
Sbjct: 255 MPGLCFSNELISRDEGLHQEFAVELFKLLR-------NKPSTETIHSIVKEAVEIEKNFI 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++++++R   Q+G  P++  ++NPF +M E I L  + NFF
Sbjct: 308 LDALPCNLIGMNSEKMSEYIEYVSDRLLKQVGQPPIWN-SKNPFDFM-ENISLDGKTNFF 365

Query: 121 ETRVTEY 127
           E RV +Y
Sbjct: 366 EKRVGDY 372


>gi|265756566|ref|ZP_06090772.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
 gi|263233754|gb|EEZ19369.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
          Length = 349

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI + 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKK 115
              +     GLN    E Y+Q++ N R   +G  PL  Y EN        W+S+  +   
Sbjct: 269 QYVIGDNIQGLNWKMIEDYIQYLGNLRWSSLGFGPL--YEENHKEPESMHWVSQYSNANM 326

Query: 116 EK-NFFETRVTEYQQGAGLKWD 136
            K +FFE + T Y +   L+ D
Sbjct: 327 VKTDFFEAKSTAYAKSTALEDD 348


>gi|225434341|ref|XP_002276454.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 841

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I R E LH +F   + + ++ + P  W     QK   ++HEA  +E  + 
Sbjct: 701 MPGLTFSNELISRYEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAMEIETQFI 753

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+ A     Y++F+ +R    +G E  +   ENPF WM E I L+   NFF
Sbjct: 754 CEALPCALIGMKATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFF 811

Query: 121 ETRVTEYQQGA 131
           + R+ +YQ+ +
Sbjct: 812 QRRMGDYQKAS 822


>gi|22788780|ref|NP_690492.1| Rr2 [Heliothis zea virus 1]
 gi|22671540|gb|AAN04367.1|AF451898_72 Rr2 [Heliothis zea virus 1]
          Length = 333

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 76/135 (56%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    ++I RDE LH +F I +  N ++ E      +   +K   ++ +A  +E  +
Sbjct: 193 MPGLTHSNEFISRDEGLHCDFAILLFRNYLRPE-----CRSSDEKVINIVTDAVRIEQEF 247

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             E++P   +G+N     +Y++F+A+R  +++    ++   +NPF +M+  I L+ + NF
Sbjct: 248 LTESLPVSMIGMNCKLMCEYIEFVADRLLYELIGRKIYN-AKNPFDFMTS-ISLEGKTNF 305

Query: 120 FETRVTEYQQ-GAGL 133
           FE +V+EY++ G G+
Sbjct: 306 FEKKVSEYKRYGVGV 320


>gi|313887688|ref|ZP_07821370.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312846297|gb|EFR33676.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 346

 Score = 63.9 bits (154), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 8/142 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G   + +YI RDE+ HL     +I ++K E P ++T E  +K + ML +    EIA+ 
Sbjct: 206 MPGTVSEIRYINRDENTHLWLFRSIILEMKKEEPEIFTDENIEKYKEMLKKGVEEEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKK 115
              +     GLN    E Y+ ++ N R   +G   LF   EN        W+SE  D  +
Sbjct: 266 KYVIGDEIKGLNEKMIEDYIMYLGNLRSRNLGFGNLF--DENIDEPESMKWVSEYSDPNQ 323

Query: 116 EK-NFFETRVTEYQQGAGLKWD 136
            K +FFE R + Y + + ++ D
Sbjct: 324 IKTDFFEARPSAYSKSSVIEDD 345


>gi|302843870|ref|XP_002953476.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
 gi|300261235|gb|EFJ45449.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
          Length = 400

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 14/138 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQ-KSRTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   +   +        +K+ ++ + + ++ EA  +E  +
Sbjct: 261 MPGLTFSNELISRDEGLHCDFACLLYGML--------SKQLEESRIKEIICEAVDIENEF 312

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             + +P   +G+N+    QY++F+A+R    +G    +  T NPF +M ++I L+ + NF
Sbjct: 313 CTDALPVDLIGMNSRLMAQYIEFVADRLLVALGCSKAYNVT-NPFDFM-DMISLQGKTNF 370

Query: 120 FETRVTEYQQG---AGLK 134
           FE RV +YQ+    AGL+
Sbjct: 371 FEKRVGDYQKSGVMAGLQ 388


>gi|222824493|ref|YP_002576067.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
 gi|222539714|gb|ACM64815.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
          Length = 340

 Score = 63.9 bits (154), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+      K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERADLFNDTNVSKIYDMFKKAGELEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLIAINLDKIYN-VKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGA 131
           FE++VT Y +G+
Sbjct: 323 FESKVTNYSKGS 334


>gi|169613737|ref|XP_001800285.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
 gi|111061216|gb|EAT82336.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
          Length = 409

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +        T+  +   + ++ EA  +E  + 
Sbjct: 255 MPGLTFSNELISRDEGMHTDFACLLFSLLN-------TRPSKDAVKAIITEAVEIEQEFL 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+    QY++F+A+R    +G   ++  T NPF +M E I L  + NFF
Sbjct: 308 TEALPCALLGMNSTLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFF 365

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 366 EKRVGDYQKAG 376


>gi|300706309|ref|XP_002995432.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
 gi|239604534|gb|EEQ81761.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
          Length = 325

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 13/131 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   ++NQ  I ++PH+           ++ EA  +E  +
Sbjct: 190 MPGLTFSNELISRDEGLHCDFAC-LLNQYLINKSPHI---------LDIVKEAVEIEKEF 239

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
              ++P   +G+N     QY++F+A+R    +GLE  +  T NPF +M E I L  + NF
Sbjct: 240 LGVSLPVNLIGMNCKLMCQYIEFVADRLLINLGLEKYYN-TLNPFDFM-ENISLVGKTNF 297

Query: 120 FETRVTEYQQG 130
           F+ R ++YQ+ 
Sbjct: 298 FDKRESQYQKA 308


>gi|227871657|ref|ZP_03990072.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
 gi|227842499|gb|EEJ52714.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
          Length = 347

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL F  +++ ++K E P L+ +    +   M+ +    EIA+ 
Sbjct: 207 MPGSVQEIRYINRDENTHLWFFRNMLLELKKEEPELFDEAHIAEITEMVKKGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GLN    E Y++++ N R   +GL  L++ Y + P    W+S+  D    K
Sbjct: 267 QYVIGDSIPGLNGKMVEDYIRYLGNLRYRSLGLPNLYEGYEKEPESMKWVSQYADANMVK 326

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE R T Y +   ++ D
Sbjct: 327 TDFFEARSTAYAKSTAIEDD 346


>gi|322795965|gb|EFZ18591.1| hypothetical protein SINV_11129 [Solenopsis invicta]
          Length = 426

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I I+ P        +  ++++ +A  +E  + 
Sbjct: 284 MPGLTFSNELISRDEGLHCDFACLIFKHI-IQKPSF------EHVKSIIMDAVEIEKEFL 336

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N      Y++F+A+R    +G E ++  +ENPF +M+  I L+ + NFF
Sbjct: 337 TQALPVELIGMNCSLMCNYIEFVADRLFVALGFEKVYN-SENPFSFMN-FISLEGKTNFF 394

Query: 121 ETRVTEYQQ 129
           E +V EY++
Sbjct: 395 EKKVGEYKK 403


>gi|297587320|ref|ZP_06945965.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
 gi|297575301|gb|EFH94020.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
          Length = 354

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I  +K E P L+T+E   + + M+ + +  EI +A
Sbjct: 214 MPGTVQEIRYINRDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGSEAEIEWA 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
              + +   GL+    E Y++++ N R   +G   ++   E   P   W+SE  D  K K
Sbjct: 274 KYVIGEKIQGLSIKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIK 333

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + + Y + A ++ D
Sbjct: 334 TDFFEAKPSAYSKSAIIEDD 353


>gi|328700093|ref|XP_001944536.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Acyrthosiphon pisum]
          Length = 361

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  Q     ++ EA  +E  + 
Sbjct: 221 MPGLTFSNELISRDEGLHTDFACLLFK-------HLEQKPPQAVITHIICEAVTIEQDFL 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   VG++      Y++F+A+R  +++G   +++ + NPFP+M ++I  + + NFF
Sbjct: 274 TNALPVRMVGMSCEKMAVYIEFVADRLLNELGCPTVYR-SSNPFPFM-DLISQQGKTNFF 331

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+ +
Sbjct: 332 EKRVGDYQKAS 342


>gi|15639047|ref|NP_218493.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189025287|ref|YP_001933059.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|6093976|sp|O83092|RIR2_TREPA RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3322311|gb|AAC65049.1| ribonucleoside-diphosphate reductase, subunit beta (nrdB)
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189017862|gb|ACD70480.1| ribonucleoside-diphosphate reductase, subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|291059468|gb|ADD72203.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           pallidum subsp. pallidum str. Chicago]
          Length = 351

 Score = 63.5 bits (153), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P ++T    +  R M+ E    EI + 
Sbjct: 211 MPGSVQEIRYINRDENTHLWLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWG 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEK 117
              +     GLN      Y++++ N RC  +G EPL+   +       W+S+  +    K
Sbjct: 271 DYVIGDQIPGLNRHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIK 330

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y + + +
Sbjct: 331 TDFFEAKSTAYAKSSAM 347


>gi|51869996|ref|YP_073549.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
 gi|51858204|gb|AAU10888.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
          Length = 374

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDE++H+     +   I  E P + TK+F +   T+  E   LE A+ 
Sbjct: 239 MKGMGKVVEWSIRDENVHVEGLCKLFKTIVSEYPFILTKDFYKAVETLQQEVLKLETAFV 298

Query: 61  HET-MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
               +      L       Y+++I  RR  Q+GL       +NP  W+S +I  +   NF
Sbjct: 299 DLVFIEDKLKNLKRVDVINYVKYILQRRTVQLGLSNKTDL-QNPILWVSWLISGRDVTNF 357

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RVTEY  G GL+ D
Sbjct: 358 FENRVTEYDVG-GLEGD 373


>gi|158430770|pdb|2RCC|A Chain A, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430771|pdb|2RCC|B Chain B, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430772|pdb|2RCC|C Chain C, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
          Length = 346

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 2/133 (1%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
           V  +    YI RDE LH+    ++  ++ +E P L T+E +   +T L +A  LE  +  
Sbjct: 207 VSTSTXINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLXKAADLEKDWFR 266

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-NF 119
             +     G+N    E Y+ FIAN+R  Q+G E P  +   NP  W+    D+   K +F
Sbjct: 267 YIIGDKIPGINPEDXETYISFIANKRAVQLGXEKPYPEIKHNPXKWIRAYEDVNSGKSDF 326

Query: 120 FETRVTEYQQGAG 132
           FE +  +Y + + 
Sbjct: 327 FEQKSRQYAKVSA 339


>gi|20069937|ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|20043331|gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|33331769|gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-A]
          Length = 313

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F           N  +  K   +K   M  EA  +E  + 
Sbjct: 179 MPGLTFSNELISRDEGMHTDFAC------LYYNTRVKEKLSYEKILDMFKEAVDIEKEFF 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    +Y++F+A+R   Q+G +P +    NPF +M+  I L+ + NFF
Sbjct: 233 TDALPVSLLGMNATMMCEYIEFVADRLLMQLG-QPKYYNARNPFSFMNN-ISLEGKTNFF 290

Query: 121 ETRVTEYQQ-GAG 132
           E RV EY+  G G
Sbjct: 291 ERRVGEYKMFGTG 303


>gi|83859670|ref|ZP_00953190.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
 gi|83852029|gb|EAP89883.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
          Length = 348

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    + + +    E   L TK  +            LE  + 
Sbjct: 186 MKGMGQIVSWSVRDESLHCEGMMKLFHTFAEETGAL-TKGVKDDIADCCKTVVSLEDKFI 244

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     + Y+++IA+ R  Q+ L  ++   E+P PW++E+++  +  NF
Sbjct: 245 ELAFEAGEVEGMTPEDIKNYIRYIADWRMKQLKLPTIYGVEEHPIPWLTEILNGVEHANF 304

Query: 120 FETRVTEYQQGA 131
           FE R TEY +GA
Sbjct: 305 FEARATEYSKGA 316


>gi|167648664|ref|YP_001686327.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter sp.
           K31]
 gi|167351094|gb|ABZ73829.1| Ribonucleoside-diphosphate reductase [Caulobacter sp. K31]
          Length = 346

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   + T E             ++E A+ 
Sbjct: 186 MKGMGQIVSWSIRDESLHCEGIIKLYHAFNAETKCV-TPEVAADIVECCKSVVIMEDAFI 244

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + G+     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NF
Sbjct: 245 DLAFEAGEIQGMTPHDIKQYIRFIADWRLRQLHLPEVYGIKENPLPWLQSLLSGVEHANF 304

Query: 120 FETRVTEYQQGA 131
           FE R TEY + A
Sbjct: 305 FEARATEYSKAA 316


>gi|229816571|ref|ZP_04446870.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
 gi|229807906|gb|EEP43709.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
          Length = 352

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I +++ E P L++ E     R ML E    EIA+ 
Sbjct: 212 MPGSAQEIRYINRDENTHLWLFRSIILELQKEEPQLFSNENVTMLREMLEEGVRQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GL     E Y++++ N R   +G   L++ Y   P    W+S+  +    K
Sbjct: 272 RYVLGDAIPGLTGDMVEGYIKYLGNLRWSSLGFGQLYEGYRTEPADMAWVSQYSNANMVK 331

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y +   L
Sbjct: 332 TDFFEAKSTAYAKSTAL 348


>gi|320164906|gb|EFW41805.1| ribonucleotide reductase m2 polypeptide [Capsaspora owczarzaki ATCC
           30864]
          Length = 352

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +         +        ++ +A  +E  + 
Sbjct: 215 MPGLTFSNELISRDEGLHCDFACMLFGLLN-------NRPSNADVLAIIKDAVAIEQEFL 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    + Y++F+A+R    +G E  +K  ENPF +M ++I L+ + NFF
Sbjct: 268 TDALPVALIGMNGGLMKTYIEFVADRLLVALGQEKHYK-VENPFDFM-DLISLQGKTNFF 325

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 326 ERRVGEYQK 334


>gi|149182583|ref|ZP_01861054.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
 gi|148849719|gb|EDL63898.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
          Length = 345

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 4/134 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE LH+     +  ++  ENP   T E +         A  LEI + 
Sbjct: 205 MVATSTMINYINRDEQLHVGLFEKIYKEVLHENPEYDTAELKVFGTQAFKRAAELEIEWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMS--EVIDLKKEK 117
            + +     GL     E Y++F+AN+R  Q+G + P   Y  NP  W+   + +DL K  
Sbjct: 265 EQIIGNKIDGLLMSDLEAYIKFMANKRAEQMGFQAPFEGYRTNPLRWIVAYQEVDLGK-T 323

Query: 118 NFFETRVTEYQQGA 131
           +FFE +  +Y + +
Sbjct: 324 DFFEQKSRQYTKTS 337


>gi|218442220|ref|YP_002380549.1| ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
 gi|218174948|gb|ACK73681.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
          Length = 355

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I +     PH   + ++     M   A   E  + 
Sbjct: 215 MPGSADIFKMINRDELSHVRLYQRIIVEAMETFPHSVEQIYE-----MFDTAVQHECRWT 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE- 116
           +  +    +G+   S EQY +++AN R + IGL+PL+   KY ++P+  +    D KK+ 
Sbjct: 270 NHIVGDNILGITESSTEQYTKYLANHRLNTIGLKPLYEDEKYKKSPYSHLERFSDTKKDA 329

Query: 117 ---KNFFETRVTEYQQGAGLK-WD 136
               NFFE  VT Y   +G+  WD
Sbjct: 330 HTKANFFEATVTSYVMSSGVTGWD 353


>gi|157869457|ref|XP_001683280.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|68224164|emb|CAJ04657.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 392

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         + N H+  K  +++   ++ +A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHTDFAC------LLYNSHIKHKLPRERVLEIIVDAVNIEREFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFF
Sbjct: 307 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYHSTQ-PFEFM-EMISLQGKTNFF 364

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 365 ERKVGEYQKAG 375


>gi|223983469|ref|ZP_03633655.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
 gi|223964641|gb|EEF68967.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
          Length = 348

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T E +Q  R ML +    EI + 
Sbjct: 208 MPGSVQEIRYINRDENTHLWLFRSMILELRKEEPQLFTPEREQLYREMLKQGVEEEIEWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
              +     GLN      Y++++ N R   I LE L+   E       W+S+  +    K
Sbjct: 268 CAILGDEIPGLNKTMIRDYIRYLGNLRAKAIHLEILYPGEEEEPASMKWVSQYANANLIK 327

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE R + Y + + LK D
Sbjct: 328 TDFFEARSSAYAKASALKDD 347


>gi|253574542|ref|ZP_04851883.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. oral taxon 786 str. D14]
 gi|251846247|gb|EES74254.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. oral taxon 786 str. D14]
          Length = 343

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++   YI RDE+ H  F  +V  Q+ I+ P L TKE    +   +  A  LE  +A
Sbjct: 202 MMGTSQMISYIQRDENQHCYFFAEVFKQLLIDYPELNTKENIDYAYRTIDRAVELETNWA 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK 117
           H T+ K   G++      Y+++IAN+R   +GLE  +   + N  PW+    D  L   K
Sbjct: 262 HYTL-KNVPGIDLNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATK 320

Query: 118 -NFFETRVTEY 127
            +FFE +   Y
Sbjct: 321 TDFFEAKSRNY 331


>gi|325294459|ref|YP_004280973.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064907|gb|ADY72914.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 352

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 11/143 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIA 58
           M G A+  +YI RDE  H+      +  +  E      K++  K +   M   A   E  
Sbjct: 212 MQGTADIIRYINRDELTHVILFEHFMKDLTDEE----FKKYLPKDKIYEMFKVAVNQEQR 267

Query: 59  YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-- 116
           ++ + +    +G+N  S E+Y  ++AN+R   +GL+P+F  T NP+  +  + D   E  
Sbjct: 268 FSKKVIGNKILGMNEKSIEEYTYYVANKRLKALGLDPIFPDTPNPYEHLERIADTGGEGN 327

Query: 117 --KNFFETRVTEYQQGAGLK-WD 136
              NFFE  VT Y Q + ++ WD
Sbjct: 328 VKANFFEATVTSYNQASAVEGWD 350


>gi|166367085|ref|YP_001659358.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
           aeruginosa NIES-843]
 gi|166089458|dbj|BAG04166.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
           aeruginosa NIES-843]
          Length = 283

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I +      H   + ++     M   A   E  + 
Sbjct: 143 MSGSADVFKMINRDELSHVRLYQKLIPEAMATFSHSVEQIYE-----MFDTAVKHECRWT 197

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE- 116
           +  +    +G+   S EQY +++AN R   IGLEPL+   KY ++P+  +    D KKE 
Sbjct: 198 NHIVGNDILGITEYSTEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEG 257

Query: 117 ---KNFFETRVTEYQQGAGLK-WD 136
               NFFE  VT Y   +GL  WD
Sbjct: 258 HTKANFFEATVTSYVMSSGLTGWD 281


>gi|168049349|ref|XP_001777126.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671569|gb|EDQ58119.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 325

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +         K  + +   ++ EA  +E  + 
Sbjct: 185 MPGLTFSNELISRDEGLHCDFACLLYTLLN-------NKLSEDRVHEIVCEAVDIEREFV 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    VG+N     +Y+ F+A+R    +G    +    NPF WM E+I L+ + NFF
Sbjct: 238 CEALSCDLVGMNKIMMSEYIDFVADRLLVSLGYNKRYN-ARNPFDWM-ELISLQGKTNFF 295

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ +
Sbjct: 296 EKRVGEYQKAS 306


>gi|255008714|ref|ZP_05280840.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
 gi|313146449|ref|ZP_07808642.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
 gi|313135216|gb|EFR52576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
          Length = 349

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 8/142 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI + 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPELFTSDRVKVYEAMMREGVKQEIEWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKK 115
              +     GLN    E Y+ ++ N R   +G  PL  Y +N        W+S+  +   
Sbjct: 269 QYVIGDEIQGLNKKMIEDYIHYLGNLRWTSLGFTPL--YEDNLKEPESMRWVSQYSNANM 326

Query: 116 EK-NFFETRVTEYQQGAGLKWD 136
            K +FFE + T Y +   L+ D
Sbjct: 327 VKTDFFEAKSTAYAKSTALEDD 348


>gi|15617531|ref|NP_258331.1| RR2B [Spodoptera litura NPV]
 gi|15553267|gb|AAL01745.1|AF325155_57 ribonucleotide reductase small subunit homolog [Spodoptera litura
           NPV]
          Length = 333

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +   H+  K  + +   ++ EA  +E  + 
Sbjct: 194 MPGLTFSNELISRDEGLHTDFAC-------LMYSHIVNKPTRDRILDIITEAVAIENEFV 246

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     +Y++F+A+R   ++  E  +  T+NPF +M+ +I L+ + NFF
Sbjct: 247 TEALPVAMLGMNNDLMSKYIEFVADRLLLELIGERHYN-TKNPFDFMN-LISLEGKTNFF 304

Query: 121 ETRVTEYQQ 129
           E +V+EYQ+
Sbjct: 305 EKKVSEYQK 313


>gi|169824933|ref|YP_001692544.1| ribonucleotide-diphosphate reductase subunit beta [Finegoldia magna
           ATCC 29328]
 gi|167831738|dbj|BAG08654.1| ribonucleoside-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 29328]
          Length = 354

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A
Sbjct: 214 MPGTVQEIRYINRDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWA 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
              + +   GL+    E Y++++ N R   +G   ++   E   P   W+SE  D  K K
Sbjct: 274 KYVIGEKIQGLSIKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIK 333

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + + Y + A ++ D
Sbjct: 334 TDFFEAKPSAYSKSAIIEDD 353


>gi|60682187|ref|YP_212331.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis NCTC 9343]
 gi|60493621|emb|CAH08410.1| putative ribonucleoside-diphosphate reductase beta chain
           [Bacteroides fragilis NCTC 9343]
          Length = 349

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EIA+ 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
              +     GLN      Y+ F+ N R   +G  PL++          W+S+  +    K
Sbjct: 269 QYVIGDQIQGLNRQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVK 328

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 329 TDFFEAKSTAYAKSTALEDD 348


>gi|13242599|ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus 1]
 gi|13177402|gb|AAK14546.1|AF204951_128 EsV-1-128 [Ectocarpus siliculosus virus 1]
          Length = 419

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 9/131 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G++     I RDE LH    + +   +K   P       +++   +   A  +E  +   
Sbjct: 284 GLSFANSLIARDEGLHATASVLIYKHLKNRLP-------RERVHEIFKHAVSVECEFISS 336

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +G++  S  +Y++F+A+   +Q+G + ++    NPF WM ++I L+ + NFFE 
Sbjct: 337 ALPVALIGISEKSMTEYIKFVADYWLNQLGYDKVYN-CANPFEWM-DMISLQGKTNFFEN 394

Query: 123 RVTEYQQGAGL 133
           RV EY +   L
Sbjct: 395 RVAEYSKPGVL 405


>gi|53713986|ref|YP_099978.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis YCH46]
 gi|52216851|dbj|BAD49444.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           fragilis YCH46]
          Length = 349

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EIA+ 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
              +     GLN      Y+ F+ N R   +G  PL++          W+S+  +    K
Sbjct: 269 QYVIGDQIQGLNRQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVK 328

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 329 TDFFEAKSTAYAKSTALEDD 348


>gi|253567022|ref|ZP_04844473.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_2_5]
 gi|265764336|ref|ZP_06092904.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           2_1_16]
 gi|15290503|gb|AAK92210.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           fragilis 638R]
 gi|251944146|gb|EES84655.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_2_5]
 gi|263256944|gb|EEZ28290.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           2_1_16]
 gi|301163665|emb|CBW23219.1| putative ribonucleoside-diphosphate reductase beta chain
           [Bacteroides fragilis 638R]
          Length = 349

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EIA+ 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
              +     GLN      Y+ F+ N R   +G  PL++          W+S+  +    K
Sbjct: 269 QYVIGDQIQGLNRQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVK 328

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 329 TDFFEAKSTAYAKSTALEDD 348


>gi|119478853|ref|XP_001259462.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
 gi|119407616|gb|EAW17565.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
          Length = 405

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNHRPDKKVVEDIIVEAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+    QY++F+A+R    +G +  +  + NPF +M E I L  + NFF
Sbjct: 309 TEALPVALLGMNSKLMCQYIEFVADRLLVALGNKKYYN-SSNPFDFM-ESISLAGKTNFF 366

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 367 EKRVGDYQKAG 377


>gi|40556174|ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
 gi|40233999|gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
          Length = 323

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 8/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  Q +   ++  A  +E  + 
Sbjct: 185 MPGLTFSNELISRDEGLHCDFACLLFTN------YLSHKPSQDRVYEIIDSAVSVETEFL 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+N+ S  +Y++F+++R    +G    +   ENPF +M E I L+ + NFF
Sbjct: 239 TEALSIDLIGMNSKSMIEYIKFVSDRLLVSLGFSKKYN-VENPFSFM-ENISLEGKANFF 296

Query: 121 ETRVTEYQQ 129
           E RV+ YQ+
Sbjct: 297 EKRVSNYQK 305


>gi|209170936|ref|YP_002268082.1| agip52 [Agrotis ipsilon multiple nucleopolyhedrovirus]
 gi|208436527|gb|ACI28754.1| ribonucleotide reductase-2B [Agrotis ipsilon multiple
           nucleopolyhedrovirus]
          Length = 313

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 11/134 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKS-RTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   +  + ++      T++    +  +M  EA  +E  +
Sbjct: 179 MPGLTFSNELISRDEGLHTDFAC-LYYKTRV------TEKLDSDTILSMFKEAVAIEKEF 231

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
               +P   +G+NA S  +Y++F+A+R   Q+G +P +    NPF +M+  I L+ + NF
Sbjct: 232 FTAALPVELLGMNAQSMCEYIEFVADRLLVQLG-QPKYFNARNPFEFMNN-ISLEGKTNF 289

Query: 120 FETRVTEYQQ-GAG 132
           FE RV EY++ GAG
Sbjct: 290 FEKRVGEYKRFGAG 303


>gi|291461082|ref|ZP_06026838.2| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379059|gb|EFE86577.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
          Length = 348

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 8/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P  ++ E      +M   A   EI + 
Sbjct: 208 MVGTSDIIRLINRDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+ + + E Y +++AN R   +GLEPL+  + +NP+  +    D + E   
Sbjct: 265 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNV 324

Query: 117 -KNFFETRVTEYQQGAGL 133
             NFFE  VT Y   + +
Sbjct: 325 KSNFFEGTVTSYNMSSSI 342


>gi|269865627|ref|XP_002651990.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063361|gb|EED42066.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 290

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H +          ++ EA  +E  + 
Sbjct: 156 MPGLTFSNELISRDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFL 206

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 207 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 264

Query: 121 ETRVTEYQQG 130
           E R T YQ+G
Sbjct: 265 ERRETNYQKG 274


>gi|164659270|ref|XP_001730759.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
 gi|159104657|gb|EDP43545.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
          Length = 397

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 254 MPGLSFSNELISRDEGLHTDFACLLFS-------HLKKRAHPDTVNRIITEAVDIEQDFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G  P    + NPF +M E I L+ + NFF
Sbjct: 307 TDALPVSLIGMNARLMCQYIEFVADRLLVALG-NPKHYNSTNPFDFM-ENISLQGKSNFF 364

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV +Y +    + D
Sbjct: 365 ERRVGDYAKAGVARAD 380


>gi|302379704|ref|ZP_07268189.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
 gi|302312611|gb|EFK94607.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
          Length = 347

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A
Sbjct: 207 MPGTVQEIRYINRDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWA 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
              + +   GL+    E Y++++ N R   +G   ++   E   P   W+SE  D  K K
Sbjct: 267 KYVIGEKIQGLSIKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIK 326

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + + Y + A ++ D
Sbjct: 327 TDFFEAKPSAYSKSAIIEDD 346


>gi|303234233|ref|ZP_07320879.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
 gi|302494774|gb|EFL54534.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
          Length = 347

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A
Sbjct: 207 MPGTVQEIRYINRDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWA 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
              + +   GL+    E Y++++ N R   +G   ++   E   P   W+SE  D  K K
Sbjct: 267 KYVIGEKIQGLSIKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIK 326

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + + Y + A ++ D
Sbjct: 327 TDFFEAKPSAYSKSAIIEDD 346


>gi|289742419|gb|ADD19957.1| ribonucleotide reductase beta subunit [Glossina morsitans
           morsitans]
          Length = 396

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F + +         HL  K  +++   ++ +A  +E  + 
Sbjct: 259 MPGLTFSNEMISRDEGLHCEFAVLMFK-------HLIQKPSKERILEIITDAVKIEKEFL 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+ S  +Y++++A+R   ++ +   +   ENPF +M++ I +  + NFF
Sbjct: 312 TEALPVDLIGMNSESMCKYIEYVADRLLLELDVGKYY-LAENPFEFMNK-ISIDGKTNFF 369

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 370 EKRVGEYQK 378


>gi|237738722|ref|ZP_04569203.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
 gi|229423825|gb|EEO38872.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
          Length = 344

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 8/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P  ++ E      +M   A   EI + 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+ + + E Y +++AN R   +GLEPL+  + +NP+  +    D + E   
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNV 320

Query: 117 -KNFFETRVTEYQQGAGL 133
             NFFE  VT Y   + +
Sbjct: 321 KSNFFEGTVTSYNMSSSI 338


>gi|163955147|ref|YP_001648251.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
 gi|163638596|gb|ABY27955.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
          Length = 322

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F +++   ++   P + T         ++ EA  +E  + 
Sbjct: 189 MPGLCFSNELISRDEGLHQEFAVELFKTLR-NRPGVDT------IHAIVREAVEIEKGFI 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++++++R   QIG+ P    ++NPF +M E I L  + NFF
Sbjct: 242 LDALPCNLIGMNSEKMSEYIEYVSDRLLKQIGV-PTIWNSKNPFDFM-ENISLDGKTNFF 299

Query: 121 ETRVTEY 127
           E RV +Y
Sbjct: 300 EKRVGDY 306


>gi|290343623|ref|YP_003494990.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
 gi|260161038|emb|CAY39739.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
          Length = 389

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F +++   ++   P + T         ++ EA  +E  + 
Sbjct: 256 MPGLCFSNELISRDEGLHQEFAVELFKTLR-NRPGVDT------IHAIVREAVDIEKGFI 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++++++R   QIG+ P    ++NPF +M E I L  + NFF
Sbjct: 309 LDALPCNLIGMNSEKMSEYIEYVSDRLLKQIGV-PTIWNSKNPFDFM-ENISLDGKTNFF 366

Query: 121 ETRVTEY 127
           E RV +Y
Sbjct: 367 EKRVGDY 373


>gi|167461830|ref|ZP_02326919.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
 gi|322383591|ref|ZP_08057349.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321152059|gb|EFX44995.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 343

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++   YI RDE+ H  F  +V   +  + P L T E  Q     + +A  LE  +A
Sbjct: 203 MLGTSQMISYIQRDEAQHAYFFGEVFKLLLTDFPELNTSERIQYVYDTIDQAVKLEEKWA 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID--LKKEK- 117
           H  + +   G++     +Y++FIAN+R   +GL+P ++  +N  PW+    D  L + K 
Sbjct: 263 HYVLNQ-IDGIDLDDFSRYIRFIANKRLKTMGLQPAYEGVDNCMPWIRPFSDEALNQTKT 321

Query: 118 NFFETRVTEYQQ 129
           +FFE +   Y +
Sbjct: 322 DFFEAKSRTYAK 333


>gi|260950985|ref|XP_002619789.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
 gi|238847361|gb|EEQ36825.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
          Length = 419

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   + + +    NP +  K        ++ EA  +E  Y
Sbjct: 277 MPGLTFSNELICRDEGLHTDFACLLFSHLNNRPNPAIVEK--------IITEAVTIEKEY 328

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             + +P   +G+N     QY++F+A+R    +G + ++  T NPF +M E I L  + NF
Sbjct: 329 FTDALPASLLGMNCDLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNF 386

Query: 120 FETRVTEYQQGA 131
           FE RV++YQ+  
Sbjct: 387 FEKRVSDYQKAG 398


>gi|56418235|gb|AAV91049.1| ribonucleotide reductase beta subunit [Grouper iridovirus]
          Length = 384

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 6/136 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY- 59
           M G+ +  ++ +RDE++H+     +   +  E P L T++  +  +     A  LE A+ 
Sbjct: 242 MKGMGKVVEWSVRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFI 301

Query: 60  --AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKK 115
             A    P    GL   S + Y+ ++ N R   +GL  L     +ENP PW+  +I+   
Sbjct: 302 DLAFSYCP-ALDGLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGAD 360

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE  VTEY+ G 
Sbjct: 361 LTNFFENHVTEYETGG 376


>gi|326472581|gb|EGD96590.1| ribonucleotide reductase small subunit RnrA [Trichophyton tonsurans
           CBS 112818]
          Length = 408

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNYRPDPNAVEAIITEAVTIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 313 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFF 370

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 371 EKRVGDYQKAG 381


>gi|323343338|ref|ZP_08083565.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           oralis ATCC 33269]
 gi|323095157|gb|EFZ37731.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           oralis ATCC 33269]
          Length = 349

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 8/142 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    +++ ++K E P ++T E  +    M+ E    EIA+ 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNILQELKKEEPKMFTPEKVKVYEEMMREGVRQEIAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-----PFPWMSEVIDLKK 115
              +     GLN      Y+ ++ N R H +G   L  Y EN        W+S+  +   
Sbjct: 269 QYVIGDEVPGLNTKMVSDYIHYLGNLRWHSLGFGYL--YDENIQEPENMKWVSQYSNANM 326

Query: 116 EK-NFFETRVTEYQQGAGLKWD 136
            K +FFE + T Y +   L+ D
Sbjct: 327 VKTDFFEAKSTAYAKSTALEDD 348


>gi|237742881|ref|ZP_04573362.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
 gi|229430529|gb|EEO40741.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
          Length = 344

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 8/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EI + 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+ + + E Y +++AN R   +GLEPL+  + +NP+  +    D + E   
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNV 320

Query: 117 -KNFFETRVTEYQQGAGL 133
             NFFE  VT Y   + +
Sbjct: 321 KSNFFEGTVTSYNMSSSI 338


>gi|157325080|ref|YP_001468505.1| gp125 [Listeria phage A511]
 gi|66732769|gb|AAY53360.1| gp57 [Listeria phage P100]
 gi|66733088|gb|AAY52906.1| gp125 [Listeria phage A511]
          Length = 343

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  ENP L T E           A  LE A++
Sbjct: 203 MTGTGKIISFINRDELAHSKFISELIRAIVGENPELQTDELNDYVYASFRHAVELEQAWS 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E + +G  G++      Y+++ AN+    +GL+P+++ +TEN   W+    D   + + 
Sbjct: 263 SEVL-QGIEGIDVEEMLDYVKYRANKMLGMLGLQPMYQGHTENSMTWIKAYADNFTETKT 321

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 322 DFFEMRNSSYKK 333


>gi|327298815|ref|XP_003234101.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
 gi|326464279|gb|EGD89732.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
          Length = 408

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 313 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFF 370

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 371 EKRVGDYQKAG 381


>gi|56692684|ref|YP_164142.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
 gi|42517396|gb|AAS18062.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
          Length = 384

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 6/136 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY- 59
           M G+ +  ++ +RDE++H+     +   +  E P L T++  +  +     A  LE A+ 
Sbjct: 242 MKGMGKVVEWSVRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFI 301

Query: 60  --AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKK 115
             A    P    GL   S + Y+ ++ N R   +GL  L     +ENP PW+  +I+   
Sbjct: 302 DLAFSYCP-ALDGLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGAD 360

Query: 116 EKNFFETRVTEYQQGA 131
             NFFE  VTEY+ G 
Sbjct: 361 LTNFFENHVTEYETGG 376


>gi|90592764|ref|YP_529717.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
 gi|71559214|gb|AAZ38213.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
          Length = 313

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F           N  +  K       +M  EA  +E  + 
Sbjct: 179 MPGLTFSNELISRDEGLHTDFAC------LYYNTRVHDKLAPDTVLSMFKEAVAIEKEFF 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+NA S   Y++F+A+R   Q+  +P   +  NPF +M+  I L+ + NFF
Sbjct: 233 TAALPAALLGMNAQSMCDYIEFVADRLLVQLH-QPKHFHARNPFEFMNN-ISLEGKTNFF 290

Query: 121 ETRVTEYQQ-GAG 132
           E RV EY++ GAG
Sbjct: 291 EKRVGEYKRFGAG 303


>gi|302497417|ref|XP_003010709.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
 gi|291174252|gb|EFE30069.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
          Length = 408

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 313 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFF 370

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 371 EKRVGDYQKAG 381


>gi|303314521|ref|XP_003067269.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240106937|gb|EER25124.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320037571|gb|EFW19508.1| ribonucleoside-diphosphate reductase small subunit [Coccidioides
           posadasii str. Silveira]
          Length = 408

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +   +  + ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLRHRPGPEAVQAIITEAVEIEKEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 313 TDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMDN-ISLSGKTNFF 370

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 371 EKRVGDYQKAG 381


>gi|119174781|ref|XP_001239725.1| hypothetical protein CIMG_09346 [Coccidioides immitis RS]
          Length = 408

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +   +  + ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLRHRPGPEAVQAIITEAVEIEKEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 313 TDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMDN-ISLSGKTNFF 370

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 371 EKRVGDYQKAG 381


>gi|315041979|ref|XP_003170366.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
 gi|311345400|gb|EFR04603.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
          Length = 408

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNHRPEPSAVEAIITEAVTIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 313 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFF 370

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 371 EKRVGDYQKAG 381


>gi|297736972|emb|CBI26173.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ + P  W     QK   ++HEA  +E  + 
Sbjct: 159 MPGLTFSNELISRDEGLHCDFACLLYSLLQKQLP--W-----QKVHHIVHEAVEIETQFV 211

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
            E +P   +G+NA    QY++F+A+R    +G E  +   ENPF WM E I L+  +
Sbjct: 212 CEALPCALIGMNATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQCSR 266


>gi|302381236|ref|YP_003817059.1| ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302191864|gb|ADK99435.1| Ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 348

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH +  I + +    E   + TK               LE  + 
Sbjct: 189 MKGMGQIVSWSVRDESLHCDGIIKLYHAFNKETGVV-TKAVADDIVQCCETVVGLEDKFI 247

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + G+     +QY++FIA+ R  Q+ L  L+   ENP PW+  ++   +  NF
Sbjct: 248 DLAFEAGEINGMTPEDIKQYIRFIADWRLRQLKLPELYGVKENPLPWLQSLLSGVEHANF 307

Query: 120 FETRVTEYQQGA 131
           FE R TEY + A
Sbjct: 308 FEARATEYSKAA 319


>gi|270000178|gb|ACZ57936.1| m015L [Myxoma virus]
          Length = 103

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 2/88 (2%)

Query: 42  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
           +++  +++ EA ++E  +  E +P   +G+N     QY++F+A+R   ++G   +F  T 
Sbjct: 1   EERVASIIKEAVVIEQRFLTEALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIFSAT- 59

Query: 102 NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           NPF +M E I L+ + NFFE RV++YQ+
Sbjct: 60  NPFDFM-ENISLEGKTNFFEKRVSDYQR 86


>gi|302665732|ref|XP_003024474.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
 gi|291188529|gb|EFE43863.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
          Length = 529

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 381 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFL 433

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 434 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYNTT-NPFDFMDN-ISLAGKTNFF 491

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 492 EKRVGDYQKAG 502


>gi|169779219|ref|XP_001824074.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           oryzae RIB40]
 gi|238499845|ref|XP_002381157.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
 gi|83772813|dbj|BAE62941.1| unnamed protein product [Aspergillus oryzae]
 gi|220692910|gb|EED49256.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
          Length = 405

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +   Q    ++ EA  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPDPQIVEDVIVEAVSIEKEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G    F  T NPF +M   I L  + NFF
Sbjct: 310 TDALPCALLGMNSNLMCQYIEFVADRLLVALGNNKYFNAT-NPFDFMDN-ISLAGKTNFF 367

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 368 EKRVGDYQKAG 378


>gi|16332312|ref|NP_443040.1| hypothetical protein slr0591 [Synechocystis sp. PCC 6803]
 gi|1653942|dbj|BAA18852.1| slr0591 [Synechocystis sp. PCC 6803]
          Length = 355

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H    + +  ++  E   ++T    Q    M  +A   E  + 
Sbjct: 215 MPGSADIFKMINRDELSH----VRLYQKLIPEAMQVFTHSTDQIYE-MFDKAVEFECRWT 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE- 116
           +  +    +G+   S EQY +++AN R   IGL+PL+   +Y ++P+  +    D KKE 
Sbjct: 270 NHIVGNNILGITESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKKEA 329

Query: 117 ---KNFFETRVTEYQQGAGLK-WD 136
               NFFE  VT Y   +G+  WD
Sbjct: 330 HTKANFFEATVTSYVMSSGVSGWD 353


>gi|70997335|ref|XP_753417.1| ribonucleotide reductase small subunit RnrA [Aspergillus fumigatus
           Af293]
 gi|66851053|gb|EAL91379.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus Af293]
 gi|159126856|gb|EDP51972.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus A1163]
          Length = 405

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNHRPDKKVIEDIIVEAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  F  + NPF +M E I L  + NFF
Sbjct: 309 TDALPVALLGMNSKLMCQYIEFVADRLLVALGNKKYFN-SPNPFDFM-ESISLAGKTNFF 366

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 367 EKRVGDYQKAG 377


>gi|121713826|ref|XP_001274524.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
 gi|119402677|gb|EAW13098.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
          Length = 405

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPDKKVVEDIIVEAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  + NPF +M E I L  + NFF
Sbjct: 309 TDALPVALLGMNSKLMCQYIEFVADRLLVALGNKKYYN-SPNPFDFM-ESISLAGKTNFF 366

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 367 EKRVGDYQKAG 377


>gi|294782021|ref|ZP_06747353.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
 gi|294481832|gb|EFG29601.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
          Length = 344

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 8/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P  ++ E      +M   A   EI + 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKE--- 116
              +    +G+ + + E Y +++AN R   +GLEPL+  + +NP+  +    D + E   
Sbjct: 261 EHIIGNRVLGITSQTTEVYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNV 320

Query: 117 -KNFFETRVTEYQQGAGL 133
             NFFE  VT Y   + +
Sbjct: 321 KSNFFEGTVTSYNMSSSI 338


>gi|296809816|ref|XP_002845246.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
 gi|238842634|gb|EEQ32296.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
          Length = 405

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNYRPDPTAVEAIITEAVSIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 310 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMDN-ISLAGKTNFF 367

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 368 EKRVGDYQKAG 378


>gi|294659365|ref|XP_461732.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
 gi|199433907|emb|CAG90185.2| DEHA2G04268p [Debaryomyces hansenii]
          Length = 426

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 285 MPGLTFSNELICRDEGLHTDFACLLFS-------HLQNRPDAVIVERIITEAVTIEKEFF 337

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G + ++  T NPF +M E I L  + NFF
Sbjct: 338 VDALPISLLGMNCNLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFF 395

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 396 EKRVSDYQKAG 406


>gi|212533263|ref|XP_002146788.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
 gi|210072152|gb|EEA26241.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
          Length = 406

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL T+   +    ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHTDFACMLFS-------HLNTRPNPKVIEDIIVDAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 309 TDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ENISLAGKTNFF 366

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 367 EKRVGDYQKAG 377


>gi|146418573|ref|XP_001485252.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146390725|gb|EDK38883.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 418

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + +       HL  +   +    ++ EA  +E  + 
Sbjct: 274 MPGLSFSNELICRDEGLHTDFACLLFS-------HLQNRPDPEIVEKIITEAVDIEKEFF 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G + ++    NPF +M E I L  + NFF
Sbjct: 327 TDALPISLLGMNCKLMCQYVEFVADRLLVALGNKKIYNVA-NPFDFM-ENISLAGKTNFF 384

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 385 EKRVSDYQKAG 395


>gi|303237757|ref|ZP_07324316.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           disiens FB035-09AN]
 gi|302482043|gb|EFL45079.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           disiens FB035-09AN]
          Length = 349

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T E       M+ E    EIA+ 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIIVELKQEQPELFTPERIAVYEEMMREGVRQEIAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
              +     GL       Y+ ++ N R   +G   L+++ +N      W+++  +  K K
Sbjct: 269 QYVIGDKVQGLTQQMVADYIHYLGNLRWRSLGFGNLYEHNQNEPDDMQWVAQYSNANKVK 328

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y +   L
Sbjct: 329 TDFFEAKSTAYAKSTAL 345


>gi|168031987|ref|XP_001768501.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680214|gb|EDQ66652.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 331

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +          L  K  +++   ++ EA  +E  + 
Sbjct: 189 MPGLTFSNELISRDEGLHCDFACLLYTL-------LINKLSEERVYEIVCEAVEIEREFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNF 119
            E +    VG+N     +Y+ F+A+R    +G     KY   NPF WM E+I L+ + NF
Sbjct: 242 CEALSCDLVGMNKILMSEYIDFVADRLLVSLGYRK--KYNALNPFDWM-ELISLQGKTNF 298

Query: 120 FETRVTEYQQGA 131
           FE RV EYQ+ +
Sbjct: 299 FEKRVGEYQKAS 310


>gi|299144102|ref|ZP_07037182.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298518587|gb|EFI42326.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 346

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    ++I ++K E   L+T+E   + + ML E    EI + 
Sbjct: 206 MPGTVQEIRYINRDENTHLWLFRNIIQELKKEEVELFTEERINEYKCMLMEGVRQEIEWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEK 117
              +     G+ A   + Y++++ N R   IG   LF       N   W+SE  +  + K
Sbjct: 266 QYVIGDNIQGITAQMVKDYIEYLGNLRSRSIGFGNLFDRNIEEPNSMKWVSEYSNPNEIK 325

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE +V+ Y + +  + D
Sbjct: 326 TDFFEGKVSAYSKSSVFEDD 345


>gi|258648774|ref|ZP_05736243.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           tannerae ATCC 51259]
 gi|260851104|gb|EEX70973.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           tannerae ATCC 51259]
          Length = 350

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     ++ ++K E P ++T +     R M+ +    EI + 
Sbjct: 210 MPGSAQEIRYINRDENTHLWLFRSILLELKKEAPEMFTPDKVDVYRQMIAQGVEEEIKWG 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GL +     Y++++ N R   +G +PL+  Y + P    W+S+  +    K
Sbjct: 270 EYVLGDKIEGLTSEMIRDYIKYLGNLRTTSLGFDPLYDGYDKEPPSMSWVSQYSNANMIK 329

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y + + L
Sbjct: 330 TDFFEARSTAYAKSSAL 346


>gi|320580024|gb|EFW94247.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia angusta DL-1]
          Length = 408

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL           ++ EA  +E  Y 
Sbjct: 265 MPGLTFSNELICRDEGLHTDFACLLFS-------HLNNTPNNDIVLKIITEAVDIEKRYF 317

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 318 TDALPVNLLGMNCSLMCQYVEFVADRLLLSLGCKKHYNAT-NPFDFM-ENISLAGKTNFF 375

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 376 EKRVSDYQKAG 386


>gi|332031690|gb|EGI71130.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex
           echinatior]
          Length = 210

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 72/136 (52%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I ++ P        ++ ++++ +A  +E  + 
Sbjct: 69  MPGLTFSNELISRDEGLHCDFACLMFKHI-VQKPSF------ERVKSIVMDAVEIEKEFL 121

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N      Y++F+A+R    +G E ++  +ENPF +M + I +  + NFF
Sbjct: 122 TQALPVELIGMNRTFMCNYIEFVADRLFVALGFEKVYN-SENPFSFM-DFISMMGKTNFF 179

Query: 121 ETRVTEYQQGAGLKWD 136
           E +V EY++   ++ D
Sbjct: 180 EKKVGEYKKFGVMEED 195


>gi|319936387|ref|ZP_08010803.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. 29_1]
 gi|319808502|gb|EFW05054.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. 29_1]
          Length = 346

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 8/142 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T +  +  R M+      EIA+ 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNMILELQKEEPDLFTPDKIEVYRDMMKRGVEEEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWM---SEVIDLK 114
              +     GL       Y+ ++ N R   +  EPLF+ Y + P    W+   S   D+K
Sbjct: 266 QYVLGDRIEGLTMKMVSDYIHYLGNFRAQALNFEPLFEDYMQEPESMKWVSIYSNANDIK 325

Query: 115 KEKNFFETRVTEYQQGAGLKWD 136
            +  FFE R + Y + + L+ D
Sbjct: 326 TD--FFEARSSAYAKSSALEDD 345


>gi|225712968|gb|ACO12330.1| Ribonucleoside-diphosphate reductase small chain [Lepeophtheirus
           salmonis]
          Length = 335

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE  H +F         +   HL  K   +    ++ E   +E  + 
Sbjct: 197 MPGLTFSNELISRDEGSHTDFAC-------LLYSHLENKLDPKYVLQIIKEGVEIEKEFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P G +G+NA   + Y++F+A+     + +E  + +T+NPF +M   I +  + NFF
Sbjct: 250 ADSLPVGLIGMNAKMMKNYIEFVADNLLENLNIEKYY-HTKNPFNFMDN-ISMTGKTNFF 307

Query: 121 ETRVTEYQQ 129
           + RV+EYQ+
Sbjct: 308 DKRVSEYQR 316


>gi|288554979|ref|YP_003426914.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           pseudofirmus OF4]
 gi|288546139|gb|ADC50022.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           pseudofirmus OF4]
          Length = 344

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE LH+    +V  ++  E+P L  +E +   +  L  A  LE+ + 
Sbjct: 204 MVSTSTMINYINRDEQLHVYLFTNVFKELLEEHPELNNREMESFVKQSLTTAVELELKWY 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-N 118
           +  + +   G+ +     Y++FIAN+R  Q+G + +F ++  N F W+    D+   K +
Sbjct: 264 NYIIGEQIEGVTSDEMGSYLKFIANKRAKQLGYDHIFPEHRTNVFKWIKAYEDVNAAKSD 323

Query: 119 FFETRVTEYQQGAG 132
           FFE +  +Y + + 
Sbjct: 324 FFEQKSRQYAKVSS 337


>gi|269864962|ref|XP_002651756.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269866721|ref|XP_002652369.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062645|gb|EED41686.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063933|gb|EED42300.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 135

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H +          ++ EA  +E  + 
Sbjct: 1   MPGLTFSNELISRDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFL 51

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 52  SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 109

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 110 ERREANYQKG 119


>gi|320585888|gb|EFW98567.1| ribonucleotide reductase small subunit [Grosmannia clavigera
           kw1407]
          Length = 378

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 9/126 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q    ++ +A  +E  + 
Sbjct: 244 MPGLTFSNELISRDEGLHTDFACLLFS-------HLKNRPSKQLIEEIIVDAVKIEQEFL 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G + ++  T NPF +M E I L  + NFF
Sbjct: 297 TEALPCALLGMNSTLMKQYIEFVADRLLVALGNDKVYNST-NPFDFM-ENISLGGKTNFF 354

Query: 121 ETRVTE 126
           E RV E
Sbjct: 355 EKRVPE 360


>gi|269865524|ref|XP_002651954.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063427|gb|EED42101.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 205

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H +          ++ EA  +E  + 
Sbjct: 71  MPGLTFSNELISRDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFL 121

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 122 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 179

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 180 ERREANYQKG 189


>gi|18640273|ref|NP_570429.1| CMLV039 [Camelpox virus]
 gi|18482949|gb|AAL73746.1|AF438165_36 ribonucleotide reductase small subunit [Camelpox virus M-96]
 gi|19717972|gb|AAG37497.1| CMP39L [Camelpox virus CMS]
          Length = 319

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++   +++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVISIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++    NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVI-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 294 EKRVGEYQK 302


>gi|50288235|ref|XP_446546.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525854|emb|CAG59473.1| unnamed protein product [Candida glabrata]
          Length = 335

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A    +I RD   + +F   +         HL TK   +    ++ EA  +E A+ 
Sbjct: 190 MPGVAMATNHICRDRGFYADFACLLF-------AHLKTKPNPKIIEQIITEAVEIEKAHY 242

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             +MP   +G++    +QY++ +A++     G E  +  T NPFP+M E   + K  NFF
Sbjct: 243 RNSMPIEKLGMDLKEIDQYIESVADKLLVSFGNEKFYNAT-NPFPFMEEATSIGK-TNFF 300

Query: 121 ETRVTEYQQGAG 132
           E +V++YQ+ + 
Sbjct: 301 EKKVSDYQKASA 312


>gi|260912588|ref|ZP_05919119.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260633300|gb|EEX51459.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 348

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I+++K E P  +T E  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRNIIHEMKKEEPEYFTPEKVKLYEEMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKKEK 117
              +     GLN      Y++++ N R   +G   LF+   E P    W+S+  +    K
Sbjct: 268 QYVIGDEVQGLNGQMVNDYIRYLGNMRWRSLGFGNLFEDNIEEPENMRWVSQYANANMVK 327

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   ++ D
Sbjct: 328 TDFFEAKSTAYAKSTAIEDD 347


>gi|299747484|ref|XP_001837064.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|298407540|gb|EAU84681.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 379

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 69/130 (53%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I RDE +H +F   +   ++ + PH            ++ EA  +E  + 
Sbjct: 237 LPGLTFSNELISRDEGMHTDFACLLFAYLR-KRPH------SDTILAIVTEAVEIEKEFF 289

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  + + +NPF +M E+I ++ + NFF
Sbjct: 290 SDALPVSLIGMNSSLMNQYIEFVADRLLTSLGNDKHY-HVDNPFDFM-ELISMEGKANFF 347

Query: 121 ETRVTEYQQG 130
           E RV++Y + 
Sbjct: 348 EKRVSDYAKA 357


>gi|165969130|ref|YP_001651030.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
 gi|164663626|gb|ABY65846.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
          Length = 339

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 7/133 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH NF     N+   E   + + E       M  EA  +E  + 
Sbjct: 203 MPGLTFSNELISRDEGLHTNFACLYYNEYIDERDKMSSAEILD----MFVEAVNIEKEFF 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N+ +  +Y++F+A+R   ++  +P    T NPF +M+  I L+ + NFF
Sbjct: 259 TSALPCDLLGMNSRAMCEYIEFVADRLLTELQ-QPKHFNTPNPFNFMNN-ISLEGKTNFF 316

Query: 121 ETRVTEYQQ-GAG 132
           E RV EY++ GAG
Sbjct: 317 ERRVGEYKRFGAG 329


>gi|241951880|ref|XP_002418662.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
 gi|223642001|emb|CAX43965.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
          Length = 394

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    + I RDE +H ++   + + +K + +P +  K        ++ EA  +E  Y
Sbjct: 254 MPGLTFSNELICRDEGIHTDYACLLFSYLKNKPSPEIIEK--------IITEAVTIEKKY 305

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             + +P   +G+N     QY++F+A+R     G +  +  T NPF +M E I L  + NF
Sbjct: 306 FSDALPVSLLGMNCDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNF 363

Query: 120 FETRVTEYQQGA 131
           FE RV++YQ+  
Sbjct: 364 FEKRVSDYQKAG 375


>gi|269866693|ref|XP_002652360.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062665|gb|EED41696.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 211

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H +          ++ EA  +E  + 
Sbjct: 77  MPGLTFSNELISRDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFL 127

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 128 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 185

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 186 ERREANYQKG 195


>gi|269864946|ref|XP_002651751.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269865852|ref|XP_002652068.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269866233|ref|XP_002652201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062966|gb|EED41855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063214|gb|EED41988.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063944|gb|EED42305.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 226

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H +          ++ EA  +E  + 
Sbjct: 92  MPGLTFSNELISRDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFL 142

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 143 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 200

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 201 ERREANYQKG 210


>gi|153814165|ref|ZP_01966833.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
 gi|317499963|ref|ZP_07958199.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087814|ref|ZP_08336739.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 3_1_46FAA]
 gi|145848561|gb|EDK25479.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
 gi|316898680|gb|EFV20715.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330409509|gb|EGG88950.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 3_1_46FAA]
          Length = 353

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E+P L+      + + +L EA   EI +A
Sbjct: 213 MPGSAQEIRYINRDENTHLWLFRNIIIELRKEHPELFDDHMVSEMKELLMEAVRQEIEWA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
              +     GLN      Y++++ N R   +G  P++   E       W+S+  +    K
Sbjct: 273 CYVIGNEVPGLNEKMITDYIRYLGNLRWKSLGYAPIYPGCEREPETMKWVSQYSNANMVK 332

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y +   L
Sbjct: 333 TDFFEARSTAYAKSTAL 349


>gi|282598964|ref|YP_003358881.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
 gi|257219034|gb|ACV50049.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
          Length = 346

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 3/134 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+ +  ++ +RDE +H+     +  ++  E+P L T E +++   +       E  +   
Sbjct: 196 GLTKINKWSLRDEGIHVEGSSLLYRKVMGEHPWLMTDEHKKQVYDLARAVVAAEDLFLDL 255

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---DLKKEKNF 119
              K  + +     + Y++++ NRR  Q+G + +F+    P PW+ E++     K++ NF
Sbjct: 256 AFKKYQLTMTKDESKAYVRYMMNRRLLQLGHKAIFEVQGIPCPWIEEILGGAGGKRDSNF 315

Query: 120 FETRVTEYQQGAGL 133
           FETRV  YQ    L
Sbjct: 316 FETRVDNYQASGAL 329


>gi|269864629|ref|XP_002651641.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064151|gb|EED42415.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 277

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H +          ++ EA  +E  + 
Sbjct: 143 MPGLTFSNELISRDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFL 193

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 194 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 251

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 252 ERREANYQKG 261


>gi|322817571|gb|EFZ25271.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F       +  EN ++  K   ++ R ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFAC-----LLYEN-YIVNKLPTERIREIICSAVDIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+NA     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFF
Sbjct: 252 CDSIPVRLLGMNADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFF 309

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 310 EKKVGEYQKAG 320


>gi|71648907|ref|XP_813233.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70878098|gb|EAN91382.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score = 61.2 bits (147), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F       +  EN ++  K  +++ R ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFAC-----LLYEN-YIVNKLPKERIREIICSAVDIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFF
Sbjct: 252 CDAIPVRLLGMNADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFF 309

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 310 EKKVGEYQKAG 320


>gi|19113338|ref|NP_596546.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe 972h-]
 gi|9297110|sp|P36603|RIR2_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3378511|emb|CAA20100.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe]
          Length = 391

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 9/128 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  Y 
Sbjct: 249 MPGLTFSNELICRDEGLHTDFACLMFS-------HLKHRPGRKVVEAIIVEAVDIEKEYF 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 302 TDALPVSLLGMNKDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFF 359

Query: 121 ETRVTEYQ 128
           E +V++YQ
Sbjct: 360 EKKVSDYQ 367


>gi|319902178|ref|YP_004161906.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
 gi|319417209|gb|ADV44320.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
          Length = 347

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+  +  +    M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNIILELKKEEPELFVPDKVKVYEEMMREGVKQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
              +     GL+    E Y+ ++ N R   +G  PL++  +       W+S+  +    K
Sbjct: 267 QYVIGDNIQGLSRKMLEDYIHYLGNLRWKSLGYAPLYEDNQTEPESMHWVSQYSNANMVK 326

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 327 TDFFEAKSTAYAKSTALEDD 346


>gi|71416121|ref|XP_810103.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70874586|gb|EAN88252.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F       +  EN ++  K   ++ R ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFAC-----LLYEN-YIVNKLPTERIREIICSAVDIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+NA     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFF
Sbjct: 252 CDSIPVRLLGMNADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFF 309

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 310 EKKVGEYQKAG 320


>gi|315497476|ref|YP_004086280.1| ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
 gi|315415488|gb|ADU12129.1| Ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
          Length = 350

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   + TK               LE  + 
Sbjct: 189 MKGMGQIVSWSVRDESLHCEGIIKLYHAFNKETGAV-TKAVADDIVDCCKTVVSLEDKFI 247

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             +   G V G+     +QY+++IA+ R  Q+ L  +F   ENP PW+  ++   +  NF
Sbjct: 248 DLSFEMGPVEGMTPDDIKQYIRYIADWRLRQLELPEVFGVQENPLPWLQVLLSGVEHANF 307

Query: 120 FETRVTEYQQGA 131
           FE R TEY + A
Sbjct: 308 FEARATEYSKAA 319


>gi|269865926|ref|XP_002652096.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063168|gb|EED41960.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 330

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H +          ++ EA  +E  + 
Sbjct: 207 MPGLTFSNELISRDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 258 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 315

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 316 ERREANYQKG 325


>gi|74025552|ref|XP_829342.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834728|gb|EAN80230.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 70/131 (53%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  +      ++  K  + +   ++  A L+E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVLIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFF 309

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 310 EKKVGEYQKAG 320


>gi|319785673|ref|YP_004145148.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464185|gb|ADV25917.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
          Length = 354

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T E           A  LE  + 
Sbjct: 214 MAGTGKIISFINRDELAHTKFISEVIRAIVGENPELQTDELADYVHLAFRHAIELETQWT 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L+ + T+N  PW+    D   + + 
Sbjct: 274 GEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIESLYTETTDNVMPWIRAYADNFTETKT 332

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 333 DFFEMRNASYKK 344


>gi|269863618|ref|XP_002651286.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064807|gb|EED42770.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 332

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H +          ++ EA  +E  + 
Sbjct: 207 MPGLTFSNELISRDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 258 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 315

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 316 ERREANYQKG 325


>gi|297449|emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe]
 gi|447147|prf||1913428B ribonucleotide reductase:SUBUNIT=small
          Length = 391

 Score = 60.8 bits (146), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++  + ++ EA  +E  Y 
Sbjct: 249 MPGLTFSNELICRDEGLHTDFACLMFS-------HLKHRPGRKLLKPIIVEAVDIEKEYF 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 302 TDALPVSLLGMNKDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFF 359

Query: 121 ETRVTEYQ 128
           E +V++YQ
Sbjct: 360 EKKVSDYQ 367


>gi|254418345|ref|ZP_05032069.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
 gi|196184522|gb|EDX79498.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
          Length = 349

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   + TK               +E  + 
Sbjct: 190 MKGMGQIVSWSVRDESLHCEGIIKLYHAFNKETGAV-TKAVADDIVDCCKTVVNMEDRFI 248

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NF
Sbjct: 249 DLAFEMGSVQGMTPEDIKQYIRFIADWRLRQLKLPEVYGVKENPLPWLQSLLSGVEHANF 308

Query: 120 FETRVTEYQQGA 131
           FE R TEY + A
Sbjct: 309 FEARATEYSKAA 320


>gi|167756571|ref|ZP_02428698.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
 gi|237733862|ref|ZP_04564343.1| ribonucleotide-diphosphate reductase subunit beta [Mollicutes
           bacterium D7]
 gi|167702746|gb|EDS17325.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
 gi|229382943|gb|EEO33034.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. D7]
          Length = 346

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T E  +  R ML      EIA+ 
Sbjct: 206 MSGSAQEIRYINRDENTHLWLFRNMIIELQKEEPTLFTPEKIEVYRNMLKRGVEEEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
              +     GL       Y+ ++ N R   +  EPL++  E       W+S   +    K
Sbjct: 266 QYVLGNRIEGLTMDMVSDYIHYLGNLRAFSLNFEPLYEGFETEPEAMKWVSIYSNANNIK 325

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + ++ D
Sbjct: 326 TDFFEAKSTAYAKSSAIEDD 345


>gi|282174133|ref|YP_003358235.1| ORF96 [Anguillid herpesvirus 1]
 gi|281308976|gb|ADA57859.1| ORF96 [Anguillid herpesvirus 1]
          Length = 328

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH +F   +         H+  K   ++   ++ EA  +E  + 
Sbjct: 190 MPGLIMSNEFISRDEGLHCDFACLLFKD------HILGKPGYERVSQIVTEAVEIEKEFL 243

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N      Y++F+A+R    +G  P   + +NPF +M E I ++ + NFF
Sbjct: 244 SEALPVRLLGINCEQMCSYIEFVADRLLAALGF-PKRYHVKNPFGFM-ESISMEGKTNFF 301

Query: 121 ETRVTEYQQ 129
           E  V++Y++
Sbjct: 302 EKNVSQYKK 310


>gi|319790519|ref|YP_004152152.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
 gi|317115021|gb|ADU97511.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
          Length = 352

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 7/141 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+  +YI RDE  H+      +  +  E    +    + K   M   A   E  ++
Sbjct: 212 MQGTADIIRYINRDELTHVILFEHFMKDLTDEGFKKYLT--KDKIYDMFRIAVDQEQRFS 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE---- 116
            + +    +G+N  S E Y  +IAN+R   +GLEP+F    NP+  +  + D   E    
Sbjct: 270 KKVIGNKILGMNEQSIEDYTFYIANKRLKALGLEPIFPDRGNPYEHLERIADTGGEANVK 329

Query: 117 KNFFETRVTEYQQGAGLK-WD 136
            NFFE  VT Y Q   ++ WD
Sbjct: 330 ANFFEATVTSYNQANAVEGWD 350


>gi|281204152|gb|EFA78348.1| ribonucleotide reductase-related protein [Polysphondylium pallidum
           PN500]
          Length = 323

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 10/135 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  F   + ++       L  K   +   +++ +A   E  + 
Sbjct: 187 MSGLCSSNEFISRDEGLHCQFACLLYSK-------LVNKLDAKTIESIIRDAVDCEKEFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N     +Y++F+A+     +G + ++  T NPF WM E+I +    NFF
Sbjct: 240 TQSLPVDLIGMNNRLMSEYIEFVADHLIVALGYKKIYN-TANPFDWM-ELISIDTRTNFF 297

Query: 121 ETRVTEYQ-QGAGLK 134
           E R T Y   G  +K
Sbjct: 298 EHRNTSYTIPGVAVK 312


>gi|9631087|ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
 gi|3822355|gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
          Length = 348

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  +    + R ++ +A  +E  + 
Sbjct: 212 MPGLTFSNELISRDEGLHCDFACLLFK-------HLVQRPSAARVREIVTDAVAIEQRFL 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +GLN  +  QY++F+A+R   ++     +  T NP  +M+ +I L+ + NFF
Sbjct: 265 TEALPVRLLGLNCETMSQYIEFVADRLLLELVGAKHYN-TPNPLDFMN-LISLEGKTNFF 322

Query: 121 ETRVTEYQQ 129
           E +V EYQ+
Sbjct: 323 EKKVGEYQK 331


>gi|228861726|ref|YP_002854746.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
 gi|226425174|gb|ACO53586.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
          Length = 339

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 7/133 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH NF     N+   E+  L +    ++   M  EA  +E  + 
Sbjct: 203 MPGLTFSNELISRDEGLHTNFACLYYNEYIPEHDKLSS----ERILDMFIEAVEIEKEFF 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N  S  +Y++F+A+R    +  +P      NPF +M+  I ++ + NFF
Sbjct: 259 KTALPCSLLGMNTESMCRYIEFVADRLLVDLN-QPKHFMASNPFNFMTN-ISMEGKTNFF 316

Query: 121 ETRVTEYQQ-GAG 132
           E RV EY++ GAG
Sbjct: 317 ERRVGEYRRFGAG 329


>gi|68485781|ref|XP_713171.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|68485874|ref|XP_713125.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434604|gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434651|gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|238883648|gb|EEQ47286.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 394

 Score = 60.5 bits (145), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++   + + +K        K   +    ++ EA  +E  Y 
Sbjct: 254 MPGLTFSNELICRDEGIHTDYACLLFSYLK-------NKPSSEIIEKIITEAVDIEKEYF 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R     G +  +  T NPF +M E I L  + NFF
Sbjct: 307 SDALPVSLLGMNCDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFF 364

Query: 121 ETRVTEYQQGA 131
           E RV++YQ+  
Sbjct: 365 EKRVSDYQKAG 375


>gi|295691241|ref|YP_003594934.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
 gi|295433144|gb|ADG12316.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
          Length = 346

 Score = 60.5 bits (145), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH +  I + +    E   + TK               LE  + 
Sbjct: 187 MKGMGQIVSWSIRDESLHCDGIIKLYHAFNKETGAV-TKAVADDIVDCCKHVVGLEDKFI 245

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + G+     + Y++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NF
Sbjct: 246 DLAFEAGEIQGMTPDDIKSYIRFIADWRLRQLQLPEVYGVKENPLPWLQSLLSGVEHANF 305

Query: 120 FETRVTEYQQGA 131
           FE R TEY + A
Sbjct: 306 FEARATEYSKAA 317


>gi|292397811|ref|YP_003517877.1| RR2b [Lymantria xylina MNPV]
 gi|291065528|gb|ADD73846.1| RR2b [Lymantria xylina MNPV]
          Length = 338

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  +    + R ++ +A  +E  + 
Sbjct: 202 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVQRPSAARVREIVTDAVAIEQRFL 254

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANR-RCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
            E +P   +GLN  +  QY++F+A+R     IG +     T NP  +M+ +I L+ + NF
Sbjct: 255 TEALPVRLLGLNCETMSQYIEFVADRLLVDLIGTKHY--NTANPLDFMT-LISLEGKTNF 311

Query: 120 FETRVTEYQQ 129
           FE +V EYQ+
Sbjct: 312 FEKKVGEYQK 321


>gi|229495919|ref|ZP_04389645.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
           endodontalis ATCC 35406]
 gi|229317232|gb|EEN83139.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
           endodontalis ATCC 35406]
          Length = 346

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T E + +   M+ E  L EIA+ 
Sbjct: 206 MPGSVQEIRYINRDENTHLWLFRSMILELRREQPELFTPEREAEFLEMIREGALQEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKKEK 117
              +     GL +     Y+ ++AN R   +GL  +F  + E P    W+S+  +    K
Sbjct: 266 KYVIGDEIEGLTSQMVSDYIMYLANLRSANLGLGVIFPGHEEEPASMSWVSQYSNSNLIK 325

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + + Y + A ++ D
Sbjct: 326 TDFFEAKPSAYAKSASIEDD 345


>gi|309775830|ref|ZP_07670824.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916368|gb|EFP62114.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 347

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E PHL+T+E  Q+ + ML      EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRSMILELQKEEPHLFTEELIQEYKDMLRHGVEEEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
              +     GL       Y+ ++ N R + +G   L++  E+      W+S   +    K
Sbjct: 267 EYVIGNNIEGLTMEMVSDYIHYLGNLRSNSLGFGSLYEGFESEPKSMEWVSMYANANLIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R + Y + + L
Sbjct: 327 TDFFEARSSAYAKSSAL 343


>gi|260591988|ref|ZP_05857446.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           veroralis F0319]
 gi|260536272|gb|EEX18889.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           veroralis F0319]
          Length = 348

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++T+E  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRSIILELKKEEPDMFTEEKVKVYEDMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF----KYTENPFPWMSEVIDLKKE 116
              +     GLN+     Y++++ N R   +G   L+    K  EN   W+ +  +    
Sbjct: 268 QYVIGNDVQGLNSQMVSDYIRYLGNLRWSGLGFGFLYPDNQKEPEN-MKWVGQYSNANMV 326

Query: 117 K-NFFETRVTEYQQGAGL 133
           K +FFE R T Y +   L
Sbjct: 327 KTDFFEARSTAYAKSTAL 344


>gi|258567064|ref|XP_002584276.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
 gi|237905722|gb|EEP80123.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
          Length = 401

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       H+  +        ++ EA  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHTDFACLLFS-------HIRHRPTPAAVEAIITEAVEIEKEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 306 TDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKFYHAT-NPFDFMDN-ISLAGKTNFF 363

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 364 EKRVGDYQKAG 374


>gi|242777635|ref|XP_002479074.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218722693|gb|EED22111.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 406

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +   +    ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPNPKVIEDIIVDAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 309 TDALPCSLLGMNSKLMCQYIEFVADRLLVALGNKKYYNST-NPFDFM-ENISLAGKTNFF 366

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 367 EKRVGDYQKAG 377


>gi|329888543|ref|ZP_08267141.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328847099|gb|EGF96661.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 348

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 20/141 (14%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE-----ATLL 55
           M G+ +   + +RDESLH   GI       I+  H + KE    ++ +  +      T++
Sbjct: 190 MKGMGQIVSWSVRDESLHCE-GI-------IKLYHAFNKETGAVTKAVADDIVDCCKTVI 241

Query: 56  E-----IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV 110
           E     I  A E  P    G+     + Y++FIA+ R  Q+ L  ++  TENP PW+  +
Sbjct: 242 EMEDKFIDLAFEMGPVN--GMTPDDIKAYIRFIADWRLRQLHLPEVYGVTENPLPWLQAL 299

Query: 111 IDLKKEKNFFETRVTEYQQGA 131
           +   +  NFFE R TEY + A
Sbjct: 300 LSGVEHANFFEARATEYSKAA 320


>gi|254523600|ref|ZP_05135655.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
 gi|219721191|gb|EED39716.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
          Length = 346

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  ENP L T E           A  LE  ++
Sbjct: 206 MTGTGKIISFINRDELAHTKFISELIRAIIGENPELQTNELTAYVHQAFEHAIELETQWS 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L+   T+N  PW+    D   + + 
Sbjct: 266 SEVL-DGIDGIDVEEMTRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKT 324

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 325 DFFEMRNASYKK 336


>gi|213402763|ref|XP_002172154.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
 gi|212000201|gb|EEB05861.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
          Length = 392

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 9/128 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +K    H   K+  ++   ++ EA  +E  Y 
Sbjct: 251 MPGLTFSNELICRDEGVHTDFACLMFSHLK----HRPGKKVVER---IIIEAVNIEKEYF 303

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G E  +  T NPF +M E I L  + NFF
Sbjct: 304 TDALPVYLLGMNCDLMCQYIEFVADRLLLSLGNEKYYNVT-NPFDFM-ENISLAGKTNFF 361

Query: 121 ETRVTEYQ 128
           E +V++YQ
Sbjct: 362 EKKVSDYQ 369


>gi|323487827|ref|ZP_08093085.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
 gi|323398561|gb|EGA91349.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
          Length = 348

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 4/130 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  +    YI RDE  H  F    I  +  ENP L T E  Q   T + +A  LE  +A
Sbjct: 208 MLKTSTMISYIQRDEMQHAYFIAQFIRIMLTENPELHTDENIQYIYTTIDKAVQLEKEWA 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEK 117
              +     GL+     +Y++++AN+R  Q+GL+ L++   NP PW+    D      + 
Sbjct: 268 QYILA-DIEGLDLVEFGEYVEYLANKRLRQLGLDNLYEERSNPMPWIQVFGDDMMNDTKS 326

Query: 118 NFFETRVTEY 127
           +FFE +   Y
Sbjct: 327 DFFEQKSRTY 336


>gi|288928561|ref|ZP_06422408.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288331395|gb|EFC69979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 348

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I+++K E P  +T E  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRNIIHEMKKEEPEYFTPEKVKVYEEMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKKEK 117
              +     GLNA     Y++++ N R   +G   L +   E P    W+++  +    K
Sbjct: 268 QYVIGDEVQGLNAQMVNDYIRYLGNMRWRSLGFGNLLEDNIEEPENMRWVAQYANANMVK 327

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   ++ D
Sbjct: 328 TDFFEAKSTAYAKSTAIEDD 347


>gi|224539244|ref|ZP_03679783.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519126|gb|EEF88231.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 349

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P L+T +  Q    M+ E    EI + 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRSIILELKKEEPELFTPDKVQIYENMMREGVKQEIEWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK----E 116
              +     GLN      Y+ ++ N R   +G  PL+++       M  V+        +
Sbjct: 269 QYVIGDNIQGLNRQMIADYIHYLGNLRWSSLGNPPLYEHNRKEPESMHWVLQYSNANMVK 328

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 329 TDFFEAKSTAYAKSTALEDD 348


>gi|239628850|ref|ZP_04671881.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518996|gb|EEQ58862.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 347

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I ++K E P L+T +  +    ML E    EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRSMIGELKKEEPGLFTPDNVKMLEDMLREGVSQEIEWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GL       Y++++ N R   +G EPL++ Y + P    W+++  +    K
Sbjct: 267 CYVIGDEVPGLTKDMVSSYIKYLGNLRWTGLGFEPLYEGYGKEPESMAWVNQYSNANMVK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y + A +
Sbjct: 327 TDFFEAKSTAYAKSAAI 343


>gi|167957419|ref|ZP_02544493.1| ribonucleotide-diphosphate reductase subunit beta [candidate
           division TM7 single-cell isolate TM7c]
          Length = 277

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 42/70 (60%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
            ++ RDE+LHL FGI+++  I  ENP L   EF  + R ++ +A  LE AY  + +P G 
Sbjct: 208 DWVTRDENLHLEFGINLLLTILHENPDLQDPEFADEIRNLILQAVELEEAYNRDMLPNGI 267

Query: 69  VGLNAPSCEQ 78
           +GLNA    Q
Sbjct: 268 LGLNADYVNQ 277


>gi|73974200|ref|XP_858061.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 3 [Canis familiaris]
          Length = 338

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 22/131 (16%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+                 ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCVLMKQYIEFVFQ--------------AENPFDFM-ENISLEGKTNFF 311

Query: 121 ETRVTEYQQGA 131
           E RV EYQ+ A
Sbjct: 312 EKRVAEYQRFA 322


>gi|78486104|ref|YP_392029.1| ribonucleotide-diphosphate reductase subunit beta [Thiomicrospira
           crunogena XCL-2]
 gi|78364390|gb|ABB42355.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Thiomicrospira crunogena XCL-2]
          Length = 377

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL+    +IN +    ++P +    KE ++K   +  EA   E
Sbjct: 226 MEGNAKIIKLIARDEALHLSGTQHLINILSEGKDDPEMMEIAKENEEKVYEIFREAAEQE 285

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLNA   + Y+++I N R   I L P+F+   NP PWM+
Sbjct: 286 KEWADYLFKDGSMIGLNASILKDYVEYITNTRIKAIKLNPIFENKSNPLPWMN 338


>gi|225568010|ref|ZP_03777035.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
           15053]
 gi|225163184|gb|EEG75803.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
           15053]
          Length = 355

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     ++ ++K E P L+  E  +  R M+ E    EI + 
Sbjct: 215 MPGSVQEIRYINRDENTHLWLFRSMLQELKKEEPQLFAAEDIKMYRQMIREGCEQEIRWG 274

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
           H  +     GL       Y++++ N RC  +G E +++ Y   P    W+ +  +    K
Sbjct: 275 HYVIGDKIQGLTKDMITSYIRYLGNLRCTGLGFERIYEGYDTIPESMRWVEQYSNANLIK 334

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y + + L
Sbjct: 335 TDFFEAKSTAYAKSSAL 351


>gi|197103810|ref|YP_002129187.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
 gi|196477230|gb|ACG76758.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
          Length = 350

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   + T+               LE  + 
Sbjct: 190 MKGMGQIVSWSVRDESLHCEGIIKLYHAFNKETGAV-TQAVADDIVDCCKTVVGLEDKFI 248

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NF
Sbjct: 249 DLAFEAGEVQGMTPDDIKQYIRFIADWRLKQLHLPQVYGIKENPLPWLQSMLSGVEHANF 308

Query: 120 FETRVTEYQQGA 131
           FE R TEY + A
Sbjct: 309 FEARATEYSKAA 320


>gi|71033209|ref|XP_766246.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
           strain Muguga]
 gi|68353203|gb|EAN33963.1| ribonucleotide-diphosphate reductase small subunit, putative
           [Theileria parva]
          Length = 308

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 18/117 (15%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +FG  + + +K + P       ++  + ++ EA ++E +Y 
Sbjct: 189 MPGLTFSNELIARDEGLHADFGCFIYHNLKHKLP-------EEAVQQIIKEAVVVERSYI 241

Query: 61  HETMPKGFVGLNA-----PSC-----EQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
            +++P   +G+N+       C      QY++F+A+R    +G+ P++  T NPF WM
Sbjct: 242 CDSLPCDLIGMNSRKKILTHCLIELMTQYIEFVADRLLQALGVRPVYNVT-NPFDWM 297


>gi|71024571|ref|XP_762515.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
 gi|46101992|gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
          Length = 424

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E A+ 
Sbjct: 277 MPGLTFSNELISRDEGLHTDFACLLFS-------HLRRRAHPDTVLKIITEAVEIEKAFL 329

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++++A+R    +G  P+   +  PF +M+  I L+ + NFF
Sbjct: 330 CESIPVALIGMNSKLMCQYIEYVADRLLVSLG-NPVHYGSTCPFDFMTN-ISLEGKTNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           E +V EY +    + D
Sbjct: 388 EKKVAEYAKAGVARKD 403


>gi|257462865|ref|ZP_05627271.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           D12]
          Length = 348

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     +I +IK           +++ R M   A   EI + 
Sbjct: 208 MVGTSDVIRLINRDELSHVVLFQKIIREIK---AENHNFFEEEEIRAMFRTAVEQEILWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKE--- 116
              +    +G+   + E Y +++AN R   IGL P++ ++T+NP+  +    D + +   
Sbjct: 265 EHIIGNRILGITTETTEAYTKWLANERLRTIGLAPMYEEFTKNPYKHLERFADTEGDGNV 324

Query: 117 -KNFFETRVTEYQQGAGLK-WD 136
             NFFE  VT Y   + +  WD
Sbjct: 325 KSNFFEGTVTSYNMSSSIDGWD 346


>gi|302386033|ref|YP_003821855.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
 gi|302196661|gb|ADL04232.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
          Length = 368

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G +++ +YI RDE+ HL    ++I +++ E P L+++E  +  RTM+ E    EIA+ 
Sbjct: 228 MTGSSQEIRYINRDENTHLWLFRNIILELEKEEPKLFSRERIEVYRTMIKEGCEQEIAWG 287

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GL       Y+ ++ N RC  +G   +++ + + P    W+++  +    K
Sbjct: 288 CYAIGDEVPGLTKEMITDYIMYLGNLRCASLGWGRIYEGHDKEPESMSWVNQFSNANLIK 347

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y + + L
Sbjct: 348 TDFFEAKSTAYAKSSAL 364


>gi|317060491|ref|ZP_07924976.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D12]
 gi|313686167|gb|EFS23002.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D12]
          Length = 344

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     +I +IK           +++ R M   A   EI + 
Sbjct: 204 MVGTSDVIRLINRDELSHVVLFQKIIREIK---AENHNFFEEEEIRAMFRTAVEQEILWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKE--- 116
              +    +G+   + E Y +++AN R   IGL P++ ++T+NP+  +    D + +   
Sbjct: 261 EHIIGNRILGITTETTEAYTKWLANERLRTIGLAPMYEEFTKNPYKHLERFADTEGDGNV 320

Query: 117 -KNFFETRVTEYQQGAGLK-WD 136
             NFFE  VT Y   + +  WD
Sbjct: 321 KSNFFEGTVTSYNMSSSIDGWD 342


>gi|47208564|emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 352

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 23/150 (15%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGI----------------DVINQ-IKIENPHLWTKEF-- 41
           M G+    + I RDE LH  F                  D+I + + IE      +    
Sbjct: 187 MPGLTYSNELISRDEGLHCTFACLLYSYLVKKPSEDRVKDIITKAVSIEQVGGSYRSMDG 246

Query: 42  -QQKSRTMLHEATLLEI-AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY 99
            +     ++ +AT   +  +  E +P   +G+N    +QY++F+A+R    +GL  ++  
Sbjct: 247 NKPNREVLIKDATCFCLQEFLTEALPVDLIGMNRCLMKQYIEFVADRLFADLGLAKMYN- 305

Query: 100 TENPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
            ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 306 AENPFDFM-EAISLEGKTNFFEKRVAEYQR 334


>gi|156564205|ref|YP_001429715.1| nrd beta subunit [Bacillus phage 0305phi8-36]
 gi|154622902|gb|ABS83782.1| nrd beta subunit [Bacillus phage 0305phi8-36]
          Length = 352

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  +    YI RDE  H  F   +I ++  ENP L T+E  Q     L EA   E  +A
Sbjct: 212 MMKSSTMISYIQRDEMQHAYFIGLLIRRLLTENPELNTQENAQYIVDSLKEAVATEKEWA 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
            E +     GL+    + Y++++AN+R  Q+G++ +++   NP PW+
Sbjct: 272 GEILA-DIEGLDLEEFDHYIEYLANKRVRQLGMDNIYEERGNPMPWI 317


>gi|19074323|ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
 gi|51701822|sp|Q8SRR2|RIR2_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|19068965|emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
          Length = 325

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F   +         H   K+   + + ++ +A  +E  + 
Sbjct: 190 MPGLTFSNELISRDEGLHCEFACLL---------HYHLKKKCNRIKEVVMDAVEIEKKFL 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     +Y++F+A+R    +G E ++  T NPF +M E I L  + NFF
Sbjct: 241 SESLPVNLIGMNCNLMCRYIEFVADRLLENLGEERVYNAT-NPFDFM-ENISLVGKTNFF 298

Query: 121 ETRVTEYQQG 130
           + R ++YQ+ 
Sbjct: 299 DKRESQYQKA 308


>gi|288801822|ref|ZP_06407264.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica D18]
 gi|302344783|ref|YP_003813136.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica ATCC 25845]
 gi|288335864|gb|EFC74297.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica D18]
 gi|302149273|gb|ADK95535.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica ATCC 25845]
          Length = 348

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 6/138 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++T E  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRSIILELKKEEPDMFTPEKIKVYEDMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF----KYTENPFPWMSEVIDLKKE 116
              +     GLNA     Y++++ N R   +G   L+    K  EN   W+ +  +    
Sbjct: 268 QYVIGNDVQGLNAQMVSDYIRYLGNLRWSGLGFGFLYDDNQKEPEN-MKWVGQYSNANMV 326

Query: 117 K-NFFETRVTEYQQGAGL 133
           K +FFE + T Y +   L
Sbjct: 327 KTDFFEAKSTAYAKSTAL 344


>gi|170077010|ref|YP_001733648.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
           sp. PCC 7002]
 gi|169884679|gb|ACA98392.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
           sp. PCC 7002]
          Length = 352

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I +      H     ++     M+  A   E  + 
Sbjct: 212 MPGSADIFKMINRDELSHVRLFQKLIPEAMATFDHSVDHIYE-----MVERAVQYECQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKE- 116
           +  +    +G+   S E Y +++AN R   IGLEPL+K   Y ++P+  +    D KKE 
Sbjct: 267 NHIVGNDILGITEQSTEIYTKYLANIRLQAIGLEPLYKGDQYKKSPYRHLERFSDTKKEG 326

Query: 117 ---KNFFETRVTEYQQGAGLK-WD 136
               NFFE  VT Y   +G+  WD
Sbjct: 327 NTKANFFEAGVTSYVMSSGITGWD 350


>gi|194319980|pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B
 gi|194319981|pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B
          Length = 326

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 9/118 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 218 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + N
Sbjct: 271 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTN 326


>gi|160937686|ref|ZP_02085046.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439331|gb|EDP17083.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
           BAA-613]
          Length = 347

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T +     R+ML E    EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRSMIAELRKEEPQLFTPKMVDMLRSMLEEGVAQEIQWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GL       Y++++ N R   +G   L++ Y E P    W+++  +    K
Sbjct: 267 CYVIGDDVPGLTREMVTDYIRYLGNLRWSGLGFGTLYEGYDEEPQSMKWVNQYSNANMVK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y + A +
Sbjct: 327 TDFFEAKSTAYAKSAAI 343


>gi|16124515|ref|NP_419079.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus CB15]
 gi|221233200|ref|YP_002515636.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus NA1000]
 gi|13421393|gb|AAK22247.1| ribonucleoside-diphosphate reductase, beta subunit [Caulobacter
           crescentus CB15]
 gi|220962372|gb|ACL93728.1| ribonucleoside-diphosphate reductase beta chain [Caulobacter
           crescentus NA1000]
          Length = 347

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH +  I + +    E   + TK               +E  + 
Sbjct: 187 MKGMGQIVSWSIRDESLHCDGIIKLYHAFNKETGAV-TKAVADDIVDCCKTVVGMEDNFI 245

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + G+     + Y++F+A+ R  Q+ L  ++   ENP PW+  ++   +  NF
Sbjct: 246 DLAFEAGDIQGMTPDDIKAYIRFVADWRLRQLHLPEVYGVKENPLPWLQSLLSGVEHANF 305

Query: 120 FETRVTEYQQGA 131
           FE R TEY + A
Sbjct: 306 FEARATEYSKAA 317


>gi|2465173|emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei]
          Length = 337

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  +      ++  K  + +   ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFF 309

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 310 EKKVGEYQKAG 320


>gi|261335316|emb|CBH18310.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  +      ++  K  + +   ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFF 309

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 310 EKKVGEYQKAG 320


>gi|315304277|ref|ZP_07874626.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           ivanovii FSL F6-596]
 gi|313627356|gb|EFR96140.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           ivanovii FSL F6-596]
          Length = 349

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E M +G  G++      Y+++ AN+    +G+  L+  ++EN   W+    D   + + 
Sbjct: 269 EEVM-QGIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|3914640|sp|O15910|RIR2_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2411479|gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei]
 gi|261335314|emb|CBH18308.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  +      ++  K  + +   ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFF 309

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 310 EKKVGEYQKAG 320


>gi|74025550|ref|XP_829341.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834727|gb|EAN80229.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|261335315|emb|CBH18309.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  +      ++  K  + +   ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFF 309

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 310 EKKVGEYQKAG 320


>gi|74025554|ref|XP_829343.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834729|gb|EAN80231.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  +      ++  K  + +   ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  ++NPF +M ++I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFM-DMISLQGKTNFF 309

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 310 EKKVGEYQKAG 320


>gi|308049658|ref|YP_003913224.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Ferrimonas balearica DSM 9799]
 gi|307631848|gb|ADN76150.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Ferrimonas balearica DSM 9799]
          Length = 378

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +IN +    ++P +     E   +S  +   A   E
Sbjct: 227 MEGNAKIIRFIARDEQLHLVGTQHMINLMADGRDDPEMAEIAIECHSESIEIFRRAAEQE 286

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            A+A      G  +GLN    E Y++FI N R   IGL PLF    NP PWMS
Sbjct: 287 KAWASYLFKDGSMLGLNKQIIEDYVEFITNERMAGIGLPPLFDKRSNPLPWMS 339


>gi|118197598|ref|YP_874310.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
 gi|113472593|gb|ABI35800.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
          Length = 341

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 7/133 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F     N     N  L      Q+  +M  EA  +E  + 
Sbjct: 205 MPGLTFSNELISRDEGLHTDFACMYYNNYIPINEKL----SPQQILSMFIEAVDIEKEFF 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+NA    +Y++F+A+R   ++  +P    T NPF +M+  I L+ + NFF
Sbjct: 261 TTALPCYLLGINATEMCKYIEFVADRLLVELR-QPKHFNTPNPFNFMTN-ISLEGKTNFF 318

Query: 121 ETRVTEYQQ-GAG 132
           E RV EY++ GAG
Sbjct: 319 ERRVGEYKRFGAG 331


>gi|70921511|ref|XP_734071.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56506464|emb|CAH78308.1| hypothetical protein PC000956.02.0 [Plasmodium chabaudi chabaudi]
          Length = 87

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE 
Sbjct: 5   SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWM-DLISLQGKTNFFEK 62

Query: 123 RVTEYQQGA 131
           RV +YQ+  
Sbjct: 63  RVADYQKSG 71


>gi|255954081|ref|XP_002567793.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589504|emb|CAP95650.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 400

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       H+  +   +    ++ EA  +E  + 
Sbjct: 252 MPGLTFSNELISRDEGLHTDFACLLFS-------HMNHRPDPKVVEEIIVEAVGIEQEFL 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  + NPF +M E I L  + NFF
Sbjct: 305 TDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKYYN-SANPFDFM-ESISLAGKTNFF 362

Query: 121 ETRVTEYQQGA 131
           E RV +YQ+  
Sbjct: 363 EKRVGDYQKAG 373


>gi|148244629|ref|YP_001219323.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326456|dbj|BAF61599.1| ribonucleoside-diphosphate reductase beta subunit [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 378

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 5/117 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +    KE +++  TM  EA   E
Sbjct: 225 MEGNAKIIRMIARDEALHLTGTQHILNLMSDGKDDPDMKKIAKECEKEVITMFKEACEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
             +A      G  +GLNA   +QY+++I N R   + L P+F    NP PW++  +D
Sbjct: 285 KDWAEYLFRDGSMIGLNAKMLKQYLEYITNVRMKALNLSPVFDECINPLPWINHWLD 341


>gi|194366071|ref|YP_002028681.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas
           maltophilia R551-3]
 gi|194348875|gb|ACF51998.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
          Length = 346

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  ENP L T E           A  LE  ++
Sbjct: 206 MNGTGKIISFINRDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWS 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L+   T+N  PW+    D   + + 
Sbjct: 266 SEVL-DGIDGIDVDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKT 324

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 325 DFFEMRNASYKK 336


>gi|190574752|ref|YP_001972597.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas
           maltophilia K279a]
 gi|190012674|emb|CAQ46302.1| putative ribonucleoside-diphosphate reductase beta chain
           [Stenotrophomonas maltophilia K279a]
          Length = 346

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  ENP L T E           A  LE  ++
Sbjct: 206 MNGTGKIISFINRDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWS 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L+   T+N  PW+    D   + + 
Sbjct: 266 SEVL-DGIDGIDVDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKT 324

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 325 DFFEMRNASYKK 336


>gi|282860353|ref|ZP_06269421.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           bivia JCVIHMP010]
 gi|282586851|gb|EFB92088.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           bivia JCVIHMP010]
          Length = 347

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T E       M+ E    EIA+ 
Sbjct: 207 MSGSAQEIRYINRDENTHLWLFRNMIIELKQEEPELFTPEKVAIYEAMMREGVAQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
              +     GL       Y++++ N R   +G + LF+  +       W+++  +    K
Sbjct: 267 QYVIGNEVQGLTQQMVSDYIRYLGNLRWKSLGFDYLFEDNQTEPTDMEWVAQYSNANMVK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y +   L
Sbjct: 327 TDFFEAKSTAYAKSTAL 343


>gi|299822182|ref|ZP_07054068.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
           DSM 20601]
 gi|299815711|gb|EFI82949.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
           DSM 20601]
          Length = 349

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T E    +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTDELVAYTHDAFRHAVELETIWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E M +G  G++      Y+++ AN+    +G+  L+  ++EN   W+    D   + + 
Sbjct: 269 EEVM-EGIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|310639978|ref|YP_003944736.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
 gi|309244928|gb|ADO54495.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
          Length = 343

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 5/131 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  ++   YI RDE+ H  F  +V  Q+  + P L TKE       M++ A  LE  +A
Sbjct: 202 MMATSQMISYIQRDENQHCYFFAEVFKQLLADFPELNTKENMDYVYRMINRAVELETNWA 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK 117
           H T+ K   G++      Y++++AN R   +G++  ++  + N  PW+    D  L   K
Sbjct: 262 HYTL-KEVRGIDLNELSDYIKYMANMRLRLLGMDKAYEGVDINSMPWIKPFSDEALNATK 320

Query: 118 -NFFETRVTEY 127
            +FFE +   Y
Sbjct: 321 TDFFEAKSRNY 331


>gi|71276518|ref|ZP_00652793.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon]
 gi|71900741|ref|ZP_00682863.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|170729741|ref|YP_001775174.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa M12]
 gi|71162695|gb|EAO12422.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon]
 gi|71729511|gb|EAO31620.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|167964534|gb|ACA11544.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M12]
          Length = 349

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T             A  LE  + 
Sbjct: 209 MTGTGKIISFINRDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWT 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L+ + T+N  PW+    D   + + 
Sbjct: 269 GEVL-NGIDGIDVEEMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 328 DFFEMRNASYKK 339


>gi|269468252|gb|EEZ79942.1| ribonucleotide-diphosphate reductase subunit beta [uncultured SUP05
           cluster bacterium]
          Length = 319

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    KE + +   M  EA   E
Sbjct: 165 MEGNAKIIKMIARDEALHLTGTQHMLNLMRDGKDDPDMEKIAKECENEVIQMFKEACEQE 224

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID 112
             +A      G  +GLNA   +QY+++I N R + +GL+P+F ++  NP PW++  +D
Sbjct: 225 KDWAEYLFRDGSMIGLNADILKQYLEYITNVRMNALGLKPIFDEHVTNPLPWINSWLD 282


>gi|326796346|ref|YP_004314166.1| ribonucleoside-diphosphate reductase [Marinomonas mediterranea
           MMB-1]
 gi|326547110|gb|ADZ92330.1| Ribonucleoside-diphosphate reductase [Marinomonas mediterranea
           MMB-1]
          Length = 377

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +    +E +Q+   +  EA   E
Sbjct: 226 MEGNAKIIKLIARDEALHLTGTQHMLNLMTSGKDDPEMAIIAQECRQEITDIFIEAAQQE 285

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLNA    QY+++I+N R   +GLEP F+   NP PW++
Sbjct: 286 KEWAKYLFKDGSMIGLNAEILGQYVEYISNVRMQAVGLEPAFETKSNPIPWIN 338


>gi|73979723|ref|XP_856346.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
           (Ribonucleotide reductase small chain) isoform 3 [Canis
           familiaris]
          Length = 381

 Score = 57.4 bits (137), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 22/129 (17%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+                 ENPF +M E I L+ + NFF
Sbjct: 310 TEALPVKLIGMNCTLMKQYIEFVFR--------------VENPFDFM-ENISLEGKTNFF 354

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 355 EKRVGEYQR 363


>gi|317130866|ref|YP_004097148.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
 gi|315475814|gb|ADU32417.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
          Length = 345

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 2/131 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE  H+    ++  ++  E P L +++  +  +    +   LEI +A
Sbjct: 205 MVSTSTMINYINRDEQHHVYLFANIFKELMHEYPELNSEKTHRFVQETFKKGAELEINWA 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKKEK-N 118
              +     G++    E Y++F+AN+R +++G+E P   Y  NP  W+    D+   K +
Sbjct: 265 KYIIGDQMEGIDIGDLEAYIKFMANKRVNELGVERPFEGYRNNPMRWIKIYEDVNSGKTD 324

Query: 119 FFETRVTEYQQ 129
           FFE +  +Y +
Sbjct: 325 FFEQKSRQYTK 335


>gi|229916488|ref|YP_002885134.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
           sp. AT1b]
 gi|229467917|gb|ACQ69689.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sp. AT1b]
          Length = 346

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 6/134 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL-WTKEFQQKSRTMLHEATLLEIAY 59
           MVG +    YI RDE  H  F   ++  +  ENP +    +F Q     + EA  LEI +
Sbjct: 204 MVGTSTMISYIQRDEMQHSYFISQLLRAVLTENPKIDENGQFSQFVYDTMAEAVDLEIEW 263

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK---K 115
             E + +   GL+      Y++++AN+R   IGL  L++ + E+  PW+    D      
Sbjct: 264 C-EYVLRDLDGLDVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNAT 322

Query: 116 EKNFFETRVTEYQQ 129
           + +FFE +   Y +
Sbjct: 323 KSDFFEQKSRSYAK 336


>gi|255724924|ref|XP_002547391.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           tropicalis MYA-3404]
 gi|240135282|gb|EER34836.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           tropicalis MYA-3404]
          Length = 387

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    + I RDE +H ++   + + ++ + +P +  K        ++ EA  +E  Y
Sbjct: 247 MPGLTFSNELICRDEGIHTDYACLLFSYLENKPDPSIIEK--------IITEAVSIEKKY 298

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             + +P   +G+N     QY+++ A+R     G +  +  T NPF +M E I L  + NF
Sbjct: 299 FSDALPVSLLGMNCDLMCQYVEYCADRLLVAFGNDKYYNVT-NPFDFM-ENISLAGKTNF 356

Query: 120 FETRVTEYQQGA 131
           FE RV++YQ+  
Sbjct: 357 FEKRVSDYQRAG 368


>gi|332180128|gb|AEE15816.1| ribonucleotide reductase [Treponema brennaborense DSM 12168]
          Length = 346

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P ++T+E       ML E    EI + 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFKNIILELKKERPDMFTEEKVASYAEMLKEGVRQEIEWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPL---FKYTENPFPWMSEVIDLKKEK 117
              +     GL       Y+ ++ N R   +   PL   F        W+S   +    K
Sbjct: 266 EYVIGDDIPGLTRKMVRDYITYLGNLRWTNLDFPPLYPGFDTEPEDMAWVSAYSNANMVK 325

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R T Y +   L
Sbjct: 326 TDFFEARSTAYAKSTAL 342


>gi|237678830|emb|CAQ57557.1| NrdB protein [Bradyrhizobium elkanii]
          Length = 360

 Score = 57.0 bits (136), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 32/158 (20%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH   GI       I+  H W +E    +R++  +  ++++A  
Sbjct: 201 MNGMGQIVSWSVRDESLHCE-GI-------IKLFHEWNRETGAVTRSVRDD--IVDVAKT 250

Query: 61  HETMPKGFV----------GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--------- 101
              + + FV          G+       Y++++A+ R  Q+ + P+F + E         
Sbjct: 251 MVKLEENFVDLAFGLGKIEGMRPEQIHTYVRYVADWRLTQLRIAPVFGFFEAKEGGFTQL 310

Query: 102 --NPFPWMSEVIDLKKEKNFFETRVTEYQQGAGL-KWD 136
             +P PW+ E+++  +  NFFE R TEY + A    WD
Sbjct: 311 KAHPLPWLVEILNGVEHANFFEQRATEYSKAASRGSWD 348


>gi|285016983|ref|YP_003374694.1| ribonucleotide-diphosphate reductase beta subunit protein
           [Xanthomonas albilineans GPE PC73]
 gi|283472201|emb|CBA14708.1| probable ribonucleotide-diphosphate reductase beta subunit protein
           [Xanthomonas albilineans]
          Length = 346

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L T E           A  LE  ++
Sbjct: 206 MTGTGKIISFINRDELAHTKFISELIRAIIGENAELQTNELTDYVHQAFEHAIRLETEWS 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     QY+++ AN+    +G+E L+   ++N  PW+    D   + + 
Sbjct: 266 SEVL-DGIEGIDVDEMIQYVKYRANKMSGMLGIEKLYTGASDNVMPWIKAYADNFTETKT 324

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 325 DFFEMRNASYKK 336


>gi|261404531|ref|YP_003240772.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
 gi|261280994|gb|ACX62965.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
          Length = 343

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 5/131 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  ++   YI RDE+ H  F  +V  Q+  + P L TKE        +  A  LE  +A
Sbjct: 202 MMATSQMISYIQRDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWA 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK 117
           H T+     G++      Y+++IANRR   +GLE  ++  + N  PW+    D  L   K
Sbjct: 262 HYTL-SNVRGIDLNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATK 320

Query: 118 -NFFETRVTEY 127
            +FFE +   Y
Sbjct: 321 TDFFEAKSRNY 331


>gi|329922162|ref|ZP_08277907.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. HGF5]
 gi|328942352|gb|EGG38619.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. HGF5]
          Length = 370

 Score = 57.0 bits (136), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 5/131 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  ++   YI RDE+ H  F  +V  Q+  + P L TKE        +  A  LE  +A
Sbjct: 229 MMATSQMISYIQRDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWA 288

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK 117
           H T+     G++      Y+++IANRR   +GLE  ++  + N  PW+    D  L   K
Sbjct: 289 HYTL-SNVRGIDLNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATK 347

Query: 118 -NFFETRVTEY 127
            +FFE +   Y
Sbjct: 348 TDFFEAKSRNY 358


>gi|313607545|gb|EFR83848.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL F2-208]
          Length = 187

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 47  MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWS 106

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E + +G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 107 EEVL-QGIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 165

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 166 DFFEMRNSSYKK 177


>gi|307565004|ref|ZP_07627521.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           amnii CRIS 21A-A]
 gi|307346317|gb|EFN91637.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           amnii CRIS 21A-A]
          Length = 347

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T E       M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNIIVELKQEEPDLFTPEKVAVYEEMMREGVRQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
              +     GL       Y++++ N R   +G + LF+  +       W+++  +    K
Sbjct: 267 QYVIGNDVQGLTQQMVYDYIRYLGNLRWKSLGFDYLFEDNQAEPADMQWVAQYSNANMVK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y +   L
Sbjct: 327 TDFFEAKSTAYAKSTAL 343


>gi|74025548|ref|XP_829340.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834726|gb|EAN80228.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 68/131 (51%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  +      ++  K  + +   ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLYEK------YIVNKLPRDRVLEIICNAVSIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +     ++NPF +M ++I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHCN-SKNPFDFM-DMISLQGKTNFF 309

Query: 121 ETRVTEYQQGA 131
           E +V EYQ+  
Sbjct: 310 EKKVGEYQKAG 320


>gi|313900116|ref|ZP_07833616.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           HGF2]
 gi|312955168|gb|EFR36836.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           HGF2]
          Length = 347

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T+E  ++ + ML      EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRSMILELQKEEPQLFTEELIEEYKDMLRHGVEEEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEK 117
              +     GL       Y+ ++ N R + +G   L+   EN      W+S   +    K
Sbjct: 267 EYVIGNHIEGLTMEMVSDYIHYLGNLRSNSLGFGSLYDGFENEPKSMEWVSMYANANLIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R + Y + + L
Sbjct: 327 TDFFEARSSAYAKSSAL 343


>gi|269866968|ref|XP_002652448.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062479|gb|EED41609.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 100

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 46  RTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP 105
           + ++ EA  +E  +  E++P   +G+N     QY++F+A+R    +G + ++  + NPF 
Sbjct: 2   KDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFD 60

Query: 106 WMSEVIDLKKEKNFFETRVTEYQQG 130
           +M E I L+ + NFFE R   YQ+G
Sbjct: 61  FM-ENISLQGKTNFFERREANYQKG 84


>gi|16801322|ref|NP_471590.1| ribonucleotide-diphosphate reductase subunit beta [Listeria innocua
           Clip11262]
 gi|16414770|emb|CAC97486.1| lin2258 [Listeria innocua Clip11262]
          Length = 349

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E + +G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVL-QGIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|308067265|ref|YP_003868870.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
 gi|305856544|gb|ADM68332.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
          Length = 343

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 5/131 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  ++   YI RDE+ H  F  +V  Q+  + P L TKE       M++ A  LE  +A
Sbjct: 202 MMATSQMISYIQRDENQHCYFFAEVFKQLLSDFPELNTKENTDYVYRMINRAVELETNWA 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK 117
           H T+ K   G++      Y++++AN R   +G++  ++  + N  PW+    D  L   K
Sbjct: 262 HYTL-KEVRGIDLNELSDYIKYMANMRLRLLGMDKAYEGVDVNCMPWIKPFSDEALNATK 320

Query: 118 -NFFETRVTEY 127
            +FFE +   Y
Sbjct: 321 TDFFEAKSRNY 331


>gi|23100542|ref|NP_694009.1| ribonucleotide-diphosphate reductase subunit beta [Oceanobacillus
           iheyensis HTE831]
 gi|22778775|dbj|BAC15043.1| ribonucleoside-diphosphate reductase beta subunit [Oceanobacillus
           iheyensis HTE831]
          Length = 347

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 4/136 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +    YI RDE  H  F  ++      ENP     EF         ++  LEI ++
Sbjct: 207 MVGTSTMISYINRDELEHGRFITELFRATLEENPSHNNAEFIDWIYDRFQQSVELEIEWS 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
           H  + K   G++    + Y+++ AN+    +GLE L+ ++ ENP  W+   +D     + 
Sbjct: 267 HYVLNK-LEGIDMDDMDGYIKYRANKMLRMMGLEELYPQHVENPMKWVRAYVDNFDGTKT 325

Query: 118 NFFETRVTEYQQGAGL 133
           +FFE +  +Y + + L
Sbjct: 326 DFFEQKSRQYTKTSDL 341


>gi|313622843|gb|EFR93161.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           innocua FSL J1-023]
          Length = 349

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E + +G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVL-QGIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|46908387|ref|YP_014776.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes str. 4b F2365]
 gi|47091823|ref|ZP_00229618.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 4b H7858]
 gi|226224761|ref|YP_002758868.1| ribonucleoside-diphosphate reductase, subunit beta [Listeria
           monocytogenes Clip81459]
 gi|254825283|ref|ZP_05230284.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J1-194]
 gi|254853280|ref|ZP_05242628.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL R2-503]
 gi|254931734|ref|ZP_05265093.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes HPB2262]
 gi|255519998|ref|ZP_05387235.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J1-175]
 gi|300764038|ref|ZP_07074034.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL N1-017]
 gi|46881658|gb|AAT04953.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47019834|gb|EAL10572.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 4b H7858]
 gi|225877223|emb|CAS05937.1| Putative ribonucleoside-diphosphate reductase, subunit beta
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|258606640|gb|EEW19248.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL R2-503]
 gi|293583289|gb|EFF95321.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes HPB2262]
 gi|293594529|gb|EFG02290.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J1-194]
 gi|300515379|gb|EFK42430.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL N1-017]
 gi|313617790|gb|EFR90013.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           innocua FSL S4-378]
 gi|328465961|gb|EGF37142.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 1816]
 gi|328472177|gb|EGF43048.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 220]
          Length = 349

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E + +G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVL-QGIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|71901120|ref|ZP_00683227.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|182681036|ref|YP_001829196.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa M23]
 gi|71729125|gb|EAO31249.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|182631146|gb|ACB91922.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M23]
 gi|307579504|gb|ADN63473.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa subsp. fastidiosa GB514]
          Length = 349

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T             A  LE  + 
Sbjct: 209 MTGTGKIISFINRDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWT 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G++ L+ + T+N  PW+    D   + + 
Sbjct: 269 GEVL-DGIDGIDVEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 328 DFFEMRNASYKK 339


>gi|289435502|ref|YP_003465374.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289171746|emb|CBH28292.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|313632343|gb|EFR99385.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           seeligeri FSL N1-067]
 gi|313636848|gb|EFS02469.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           seeligeri FSL S4-171]
          Length = 349

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVDLETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E + +G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVL-QGIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|329847182|ref|ZP_08262210.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
           biprosthecum C19]
 gi|328842245|gb|EGF91814.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
           biprosthecum C19]
          Length = 352

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 3/133 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   L TK  Q            +E  + 
Sbjct: 189 MKGMGQIVSWSVRDESLHCEGIIKLYHAFAKETKAL-TKSVQDDIIDCCKTVVTMEDKFI 247

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKN 118
                 G V G+     + Y+++IA+ R  Q+ L  ++    ENP PW+  ++   +  N
Sbjct: 248 DLAFEMGPVQGMTPDDIKAYIRYIADWRLRQLNLPEVYGGVKENPLPWLQVLLSGVEHAN 307

Query: 119 FFETRVTEYQQGA 131
           FFE R TEY + A
Sbjct: 308 FFEARATEYSKAA 320


>gi|15837799|ref|NP_298487.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa 9a5c]
 gi|28198393|ref|NP_778707.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa Temecula1]
 gi|9106169|gb|AAF84007.1|AE003954_4 ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa
           9a5c]
 gi|28056463|gb|AAO28356.1| ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa
           Temecula1]
          Length = 346

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T             A  LE  + 
Sbjct: 206 MTGTGKIISFINRDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWT 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G++ L+ + T+N  PW+    D   + + 
Sbjct: 266 GEVL-DGIDGIDVEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKT 324

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 325 DFFEMRNASYKK 336


>gi|255018022|ref|ZP_05290148.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL F2-515]
          Length = 267

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 127 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWS 186

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E + +G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 187 EEVL-QGIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 245

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 246 DFFEMRNSSYKK 257


>gi|16804193|ref|NP_465678.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes EGD-e]
 gi|116873587|ref|YP_850368.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|217963685|ref|YP_002349363.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes HCC23]
 gi|224500181|ref|ZP_03668530.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes Finland 1988]
 gi|224501047|ref|ZP_03669354.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL R2-561]
 gi|254826956|ref|ZP_05231643.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL N3-165]
 gi|254831409|ref|ZP_05236064.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 10403S]
 gi|255028522|ref|ZP_05300473.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes LO28]
 gi|284802601|ref|YP_003414466.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5578]
 gi|284995743|ref|YP_003417511.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5923]
 gi|290893101|ref|ZP_06556089.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J2-071]
 gi|16411624|emb|CAD00232.1| lmo2154 [Listeria monocytogenes EGD-e]
 gi|116742465|emb|CAK21589.1| ribonucleoside-diphosphate reductase beta chain [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|217332955|gb|ACK38749.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes HCC23]
 gi|258599337|gb|EEW12662.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL N3-165]
 gi|284058163|gb|ADB69104.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5578]
 gi|284061210|gb|ADB72149.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5923]
 gi|290557263|gb|EFD90789.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J2-071]
 gi|307571740|emb|CAR84919.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes L99]
          Length = 349

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E + +G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVL-QGIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|255023762|ref|ZP_05295748.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J1-208]
          Length = 284

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T E  + +      A  LE  ++
Sbjct: 144 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTDELVEYTHDAFRHAVELETEWS 203

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E + +G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 204 EEVL-QGIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 262

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 263 DFFEMRNSSYKK 274


>gi|47095728|ref|ZP_00233334.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254899145|ref|ZP_05259069.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes J0161]
 gi|254912714|ref|ZP_05262726.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
 gi|254937041|ref|ZP_05268738.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes F6900]
 gi|47015871|gb|EAL06798.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258609644|gb|EEW22252.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes F6900]
 gi|293590709|gb|EFF99043.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
          Length = 349

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E + +G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVL-QGIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|327312835|ref|YP_004328272.1| ribonucleoside-diphosphate reductase subunit beta [Prevotella
           denticola F0289]
 gi|326946303|gb|AEA22188.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola F0289]
          Length = 348

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++T +  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRSIILELKKEEPDMFTSDKIKVYEDMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF----KYTENPFPWMSEVIDLKKE 116
              +     GLN      Y++++ N R   +G   L+    K  EN   W+ +  +    
Sbjct: 268 QYVIGNDVQGLNEQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPEN-MKWVGQYSNANMV 326

Query: 117 K-NFFETRVTEYQQGAGL 133
           K +FFE + T Y +   L
Sbjct: 327 KTDFFEAKSTAYAKSTAL 344


>gi|62866936|gb|AAY17359.1| ribonucleotide reductase small subunit [Haemonchus contortus]
          Length = 374

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 35  HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 94
           H+  K  Q++   ++ +A  +E  +  E++P   +G+N     QY++++A+    ++G E
Sbjct: 264 HIKNKLSQERIYYIIRDAVAIEQEFLSESLPVDMIGMNCRLMCQYIEYVADHLLVELGCE 323

Query: 95  PLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGL 133
            + K ++NPF +M E I +  + NFFE +V+EYQ+   L
Sbjct: 324 KICK-SKNPFDFM-ENISIDGKTNFFEKKVSEYQRPGVL 360


>gi|315283233|ref|ZP_07871471.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           marthii FSL S4-120]
 gi|313613124|gb|EFR87028.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           marthii FSL S4-120]
          Length = 349

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E + +G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVL-QGIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|325268390|ref|ZP_08135022.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           multiformis DSM 16608]
 gi|324989244|gb|EGC21195.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           multiformis DSM 16608]
          Length = 348

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 6/141 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++T +  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF----KYTENPFPWMSEVIDLKKE 116
              +     GLN      Y++++ N R   +G   L+    K  EN   W+ +  +    
Sbjct: 268 QYVIGNDVQGLNEQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPEN-MKWVGQYSNANMV 326

Query: 117 K-NFFETRVTEYQQGAGLKWD 136
           K +FFE + T Y +   L  D
Sbjct: 327 KTDFFEAKSTAYAKSTALADD 347


>gi|17567153|ref|NP_508269.1| hypothetical protein F19G12.2 [Caenorhabditis elegans]
 gi|10864352|gb|AAG24065.1| Hypothetical protein F19G12.2 [Caenorhabditis elegans]
          Length = 668

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 52/82 (63%), Gaps = 2/82 (2%)

Query: 48  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
           +++E+ L+E  +  E++P   +G+N     +Y++F+A+    ++G    +  T+NPF +M
Sbjct: 571 IINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN-TKNPFDFM 629

Query: 108 SEVIDLKKEKNFFETRVTEYQQ 129
            E I ++ + NFFE RV+EYQ+
Sbjct: 630 -ENISIEGKTNFFEKRVSEYQR 650


>gi|209523562|ref|ZP_03272116.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima
           CS-328]
 gi|209495967|gb|EDZ96268.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima
           CS-328]
          Length = 112

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 8/103 (7%)

Query: 42  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---K 98
           Q +   M   A   E  + +  +    +G+   S EQY +++AN R   IGLE L+   K
Sbjct: 8   QDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQYTKYLANIRLRSIGLESLYSDPK 67

Query: 99  YTENPFPWMSEVIDLKKE----KNFFETRVTEYQQGAGLK-WD 136
           Y ++P+  +    D KKE     NFFE  VT Y   +G+  WD
Sbjct: 68  YQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSSGVSGWD 110


>gi|322499081|emb|CBZ34153.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 269

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 33  NPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIG 92
           N H+  K  +++   ++ +A  +E  +  + +P   +G+NA    QY++F+A+R    +G
Sbjct: 156 NSHIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMNAELMAQYIEFVADRLLVSLG 215

Query: 93  LEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 131
            E  ++ T+ PF +M E+I L+ + NFFE +V EYQ+  
Sbjct: 216 EEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAG 252


>gi|325859841|ref|ZP_08172971.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola CRIS 18C-A]
 gi|325482767|gb|EGC85770.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola CRIS 18C-A]
          Length = 348

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++T +  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF----KYTENPFPWMSEVIDLKKE 116
              +     GLN      Y++++ N R   +G   L+    K  EN   W+ +  +    
Sbjct: 268 QYVIGNDVQGLNEQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPEN-MKWVGQYSNANMV 326

Query: 117 K-NFFETRVTEYQQGAGL 133
           K +FFE + T Y +   L
Sbjct: 327 KTDFFEAKSTAYAKSTAL 344


>gi|269861752|ref|XP_002650564.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220065950|gb|EED43491.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 106

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 2/83 (2%)

Query: 48  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
           ++ EA  +E  +  E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M
Sbjct: 10  IVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM 68

Query: 108 SEVIDLKKEKNFFETRVTEYQQG 130
            E I L+ + NFFE R   YQ+G
Sbjct: 69  -ENISLQGKTNFFERREANYQKG 90


>gi|87120532|ref|ZP_01076426.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
           MED121]
 gi|86164175|gb|EAQ65446.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
           MED121]
          Length = 377

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +    KE + ++  +  EA   E
Sbjct: 226 MEGNAKIIKLIARDEALHLTGTQHILNLMASGKDDPEMEDIAKECEDEAYQIFFEAAEQE 285

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLNA    QY+++I N R   IGL P F+   NP PW++
Sbjct: 286 KEWASYLFKDGSMIGLNAQILGQYVEYITNIRMQAIGLLPTFETKHNPIPWIN 338


>gi|291570484|dbj|BAI92756.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira
           platensis NIES-39]
          Length = 123

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 8/103 (7%)

Query: 42  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---K 98
           Q +   M   A   E  + +  +    +G+   S EQY +++AN R   IGLE L+   K
Sbjct: 19  QDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQYTKYLANIRLRSIGLESLYSDPK 78

Query: 99  YTENPFPWMSEVIDLKKE----KNFFETRVTEYQQGAGLK-WD 136
           Y ++P+  +    D KKE     NFFE  VT Y   +G+  WD
Sbjct: 79  YQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSSGVSGWD 121


>gi|118602534|ref|YP_903749.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
 gi|118567473|gb|ABL02278.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Candidatus Ruthia magnifica str. Cm (Calyptogena
           magnifica)]
          Length = 378

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +      L     +KE Q +  TM  EA   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHMLNLMSSGKDDLDMQKISKECQDEVITMFREACEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
             +A      G  +GLNA   +QY+++I N R   + L  +F    NP PW++  +D
Sbjct: 285 KDWAEYLFRDGSMIGLNAQILKQYLEYITNVRMKALNLSLIFDECTNPLPWINHWLD 341


>gi|61806369|ref|YP_214728.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
 gi|61563913|gb|AAX46968.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
          Length = 387

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKS--RTMLHEATLLEI 57
           M G A+    I RDES HL     ++ +    ++P +     ++KS  + M       E 
Sbjct: 235 MEGSAKILSLISRDESQHLVITQQILKKWADGDDPEMQEIAKEEKSFVKDMFRNTVNEEK 294

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLK 114
           A+A     +G  +GLNA     Y+++IANRR   IGL+P++      NP PW    ++ K
Sbjct: 295 AWADYLFKEGSMIGLNARLLNNYVEWIANRRMKAIGLDPIYDQPLRNNPLPWTEHWLNSK 354

Query: 115 KEKNFF-ETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G G+K D
Sbjct: 355 GQQNAPQETEIESYVIG-GIKQD 376


>gi|326560494|gb|EGE10876.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 7169]
 gi|326570427|gb|EGE20467.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC8]
 gi|326575699|gb|EGE25622.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis CO72]
 gi|326577166|gb|EGE27060.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis O35E]
          Length = 376

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            A+A+     G  +GLN     QY++FI N R   IGL  +F+   NP PW++
Sbjct: 285 KAWANYLFKDGSMIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWIN 337


>gi|47213103|emb|CAF89523.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 407

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 22/129 (17%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K   Q    ++  A  +E  + 
Sbjct: 283 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFL 335

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    ++Y++FI                 ENPF +M E I L+ + NFF
Sbjct: 336 TEALPVKLIGMNCQLMKRYIEFIYR--------------AENPFDFM-ENISLEGKTNFF 380

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 381 EKRVGEYQR 389


>gi|326560111|gb|EGE10501.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 46P47B1]
 gi|326564174|gb|EGE14410.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 12P80B1]
 gi|326573404|gb|EGE23372.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 101P30B1]
          Length = 376

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            A+A+     G  +GLN     QY++FI N R   IGL  +F+   NP PW++
Sbjct: 285 KAWANYLFKDGSMIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWIN 337


>gi|239993885|ref|ZP_04714409.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii ATCC 27126]
          Length = 376

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 21/125 (16%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTM 48
           M G ++  + I RDE+LHL+    ++N        LW K            E ++++R +
Sbjct: 225 MEGNSKIIRLIARDENLHLSSTQHILN--------LWAKGKDDPEMAQIAEECKEEARAI 276

Query: 49  LHEATLLEIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
              A   E  +A      G  +GLN     QY+++IAN+R   IGL+  F+ + NP PWM
Sbjct: 277 FMNAVEQEKQWADYLFQNGSMIGLNKEILCQYVEYIANQRMSAIGLDTPFEISSNPLPWM 336

Query: 108 SEVID 112
           +  ++
Sbjct: 337 NNYLN 341


>gi|326565416|gb|EGE15593.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 103P14B1]
          Length = 376

 Score = 55.1 bits (131), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            A+A+     G  +GLN     QY++FI N R   IGL  +F+   NP PW++
Sbjct: 285 KAWANYLFKDGSMIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWIN 337


>gi|296113118|ref|YP_003627056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella
           catarrhalis RH4]
 gi|295920812|gb|ADG61163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella
           catarrhalis RH4]
          Length = 380

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E
Sbjct: 229 MEGNAKIIKMIARDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQE 288

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            A+A+     G  +GLN     QY++FI N R   IGL  +F+   NP PW++
Sbjct: 289 KAWANYLFKDGSMIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWIN 341


>gi|257454213|ref|ZP_05619483.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter
           aerosaccus SK60]
 gi|257448386|gb|EEV23359.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter
           aerosaccus SK60]
          Length = 377

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN  Q   ++P +    ++ QQ++  +  +A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLNGTQHMINLMQWGKDDPDMVEIAQDCQQQAIEIFKDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 108
            A+A      G  +GLN     QY+++I N R   IGL P+F   + NP PW++
Sbjct: 285 KAWAKYLFKNGSMIGLNENILVQYVEYITNLRMDAIGLPPIFAAIKNNPIPWIN 338


>gi|332141553|ref|YP_004427291.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327551575|gb|AEA98293.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 376

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 21/125 (16%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTM 48
           M G ++  + I RDE+LHL+    ++N        LW K            E ++++R +
Sbjct: 225 MEGNSKIIRLIARDENLHLSSTQHILN--------LWAKGKDDPEMAQIAQECKEEARAI 276

Query: 49  LHEATLLEIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
              A   E  +A      G  +GLN     QY+++IAN+R   IGL+  F  + NP PWM
Sbjct: 277 FMNAVEQEKEWADYLFKTGSMIGLNKEILCQYVEYIANQRMSAIGLDTPFDISSNPLPWM 336

Query: 108 SEVID 112
           +  ++
Sbjct: 337 NNYLN 341


>gi|146312444|ref|YP_001177518.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp.
           638]
 gi|145319320|gb|ABP61467.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Enterobacter sp. 638]
          Length = 376

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +   A L E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVLAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLE  FK   NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYIEYITNIRMQAVGLELPFKTRSNPIPWIN 337


>gi|49237365|ref|YP_031646.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Frog virus 3]
 gi|47060183|gb|AAT09727.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Frog virus 3]
          Length = 387

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 10/138 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLL 55
           M G+ +  ++ +RDE++H+     +   +  E P + TK+      +   R    E   +
Sbjct: 241 MKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFV 300

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDL 113
           ++A+  E  P    GL     + Y+ ++ N R   +GL  L +      P PW+  +ID 
Sbjct: 301 DLAF-QECGP--VCGLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDG 357

Query: 114 KKEKNFFETRVTEYQQGA 131
               NFFE  VTEY+ G 
Sbjct: 358 ADLTNFFENHVTEYETGG 375


>gi|228861279|ref|YP_002854302.1| ribonucleotide reductase small subunit [Soft-shelled turtle
           iridovirus]
 gi|45550045|gb|AAS67856.1| ribonucleotide reductase small subunit [Rana grylio virus 9506]
 gi|194307559|gb|ACF42289.1| ribonucleotide reductase small subunit [Soft-shelled turtle
           iridovirus]
          Length = 387

 Score = 54.3 bits (129), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 10/138 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLL 55
           M G+ +  ++ +RDE++H+     +   +  E P + TK+      +   R    E   +
Sbjct: 241 MKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFV 300

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDL 113
           ++A+  E  P    GL     + Y+ ++ N R   +GL  L +      P PW+  +ID 
Sbjct: 301 DLAF-QECGP--VCGLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDG 357

Query: 114 KKEKNFFETRVTEYQQGA 131
               NFFE  VTEY+ G 
Sbjct: 358 ADLTNFFENHVTEYETGG 375


>gi|152997008|ref|YP_001341843.1| ribonucleotide-diphosphate reductase subunit beta [Marinomonas sp.
           MWYL1]
 gi|150837932|gb|ABR71908.1| Ribonucleoside-diphosphate reductase [Marinomonas sp. MWYL1]
          Length = 377

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +     E Q + R +  EA   E
Sbjct: 226 MEGNAKIIKLIARDEALHLTGTQHMLNLMASGKDDPEMAVIAAECQDEVRQIFIEAAEQE 285

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLNA    QY+++I N R   +GLE  F    NP PW++
Sbjct: 286 KEWATYLFKDGSMIGLNAQILGQYVEYITNVRMQAVGLETCFATKHNPIPWIN 338


>gi|160947324|ref|ZP_02094491.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
 gi|158446458|gb|EDP23453.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
          Length = 349

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     ++ +++ E P L+T+E     + M+      EIA+ 
Sbjct: 206 MPGSVQEIRYINRDENTHLWLFKKMLLELQNEEPELFTEEKVAVYKDMIKTGVEQEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              + +   GL     E Y++++ N R   +    L+  Y E P    W+SE  D    K
Sbjct: 266 KYVLGENIPGLTIQMVEDYIKYLGNLRSTALNFGKLYDGYDEEPESMKWVSEYSDPNAIK 325

Query: 118 -NFFETRVTEYQQGAGLKWD 136
            +FFE + + Y + + +  D
Sbjct: 326 TDFFEAKPSAYSKSSVIDDD 345


>gi|326564074|gb|EGE14316.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 103P14B1]
 gi|326570555|gb|EGE20595.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC8]
 gi|326573198|gb|EGE23167.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis CO72]
          Length = 361

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 14/116 (12%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEA-TLLEIAY 59
           M G A+  + I RDE+LHLN    ++  +  E+     +++Q  ++T   E   + E AY
Sbjct: 213 MEGNAKIIKLIARDEALHLNGTQHILTLLVKEH-----EDYQTITQTCKDEIYDIFESAY 267

Query: 60  AHETM-------PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             E             +GLN     QY+Q+I + R   IGLEP+F  T+NP PW++
Sbjct: 268 EQERAWIDYLFKDGSMIGLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWIN 322


>gi|294955280|ref|XP_002788462.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
 gi|239903931|gb|EER20258.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
          Length = 157

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 50  HEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 109
           + A  +E  +  + +P G +G+NA    +Y++F+A+R    +G   ++  + NPF WM+ 
Sbjct: 36  NSAVNVEREFITDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIYN-SANPFDWMT- 93

Query: 110 VIDLKKEKNFFETRV 124
           +I L+ + NFFE RV
Sbjct: 94  MISLQGKTNFFEKRV 108


>gi|326567429|gb|EGE17544.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC1]
          Length = 361

 Score = 53.9 bits (128), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 14/116 (12%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEA-TLLEIAY 59
           M G A+  + I RDE+LHLN    ++  +  E+     +++Q  ++T   E   + E AY
Sbjct: 213 MEGNAKIIKLIARDEALHLNGTQHILTLLVKEH-----EDYQTITQTCKDEIYDIFESAY 267

Query: 60  AHETM-------PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             E             +GLN     QY+Q+I + R   IGLEP+F  T+NP PW++
Sbjct: 268 EQERAWIDYLFKDGSMIGLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWIN 322


>gi|297265423|ref|XP_001091447.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Macaca
           mulatta]
          Length = 704

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ
Sbjct: 628 IGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQ 685

Query: 129 Q 129
           +
Sbjct: 686 R 686


>gi|326783253|ref|YP_004323801.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33]
 gi|310005200|gb|ADO99589.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33]
          Length = 296

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES HL    +++N+ +  ++P +    KE Q    +M   A   E 
Sbjct: 144 MEGSAKILSLIARDESQHLVLTQNILNKWRDGDDPEMDIIAKEEQSWVMSMFQRAVDEEK 203

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 114
            +A      G  +GLN      Y+++IANRR   I ++P+F      NP PW    ++ K
Sbjct: 204 MWAEYLFKNGSMIGLNERLLHNYVEWIANRRMKAICIKPMFDIPAKNNPLPWTEHWLNSK 263

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G G+K D
Sbjct: 264 GQQNAPQETEIESYVIG-GIKQD 285


>gi|27375117|ref|NP_766646.1| ribonucleotide-diphosphate reductase subunit beta [Bradyrhizobium
           japonicum USDA 110]
 gi|27348253|dbj|BAC45271.1| ribonucleoside-diphosphate reductase beta subunit [Bradyrhizobium
           japonicum USDA 110]
          Length = 360

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 32/158 (20%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH   GI       I+  H W +E    +R +  +  ++++A  
Sbjct: 201 MNGMGQIVSWSVRDESLHCE-GI-------IKLFHEWHRETGAVTRPVRDD--IVDVAKT 250

Query: 61  HETMPKGFV----------GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--------- 101
              + + FV          G+       Y++++A+ R  Q+ + P+F + E         
Sbjct: 251 MVKLEENFVELAFGLGKIEGMLPEHIHAYVRYVADWRLAQLRIAPVFGFFEAKEGGFTQL 310

Query: 102 --NPFPWMSEVIDLKKEKNFFETRVTEYQQGAGL-KWD 136
             +P PW+ E+++  +  NFFE R TEY + A    WD
Sbjct: 311 KAHPLPWLVEILNGVEHANFFEQRATEYSKAASRGSWD 348


>gi|88801048|ref|ZP_01116596.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
           MED297]
 gi|88776187|gb|EAR07414.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
           MED297]
          Length = 369

 Score = 53.9 bits (128), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 7/113 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI---ENPHLW--TKEFQQKSRTMLHEATLL 55
           M G A+  + I RDE+LHL+ G + I +  +   ++P +     E Q   R +  +A   
Sbjct: 218 MEGNAKLIKLIARDEALHLS-GTEFILRQWLHGGDDPQMQIVADEEQATIRQIFEDAAEQ 276

Query: 56  EIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
           E A+A+     G  +GLNA    QY++++ ++R   + L P++   +NP PWM
Sbjct: 277 EKAWANYLFNDGSMIGLNAEILHQYIEYLTDQRLDALSLSPIYGRRDNPLPWM 329


>gi|160915703|ref|ZP_02077911.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
 gi|158432179|gb|EDP10468.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
          Length = 353

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     ++ ++K E P L+T E  +  + ML      E+ +A
Sbjct: 213 MPGSVQEIRYINRDENTHLWLFRSILLELKKEEPQLFTPEHIEIYKGMLKHGVEEEVKWA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              + +   GL       Y+ ++ N R + +G   L+  Y + P    W+S   +    K
Sbjct: 273 EYVLGERMEGLTMEMVADYIHYLGNLRSNALGFGSLYDGYEKEPASMEWVSMYSNANIIK 332

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE + T Y + + L
Sbjct: 333 TDFFEAKSTAYAKSSAL 349


>gi|297582631|ref|YP_003698411.1| ribonucleoside-diphosphate reductase [Bacillus selenitireducens
           MLS10]
 gi|297141088|gb|ADH97845.1| Ribonucleoside-diphosphate reductase [Bacillus selenitireducens
           MLS10]
          Length = 347

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 4/130 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  +    YI RDE  H  F    +  +  ++P L T+E  Q     +  A  LE  +A
Sbjct: 207 MMKTSTMISYIQRDEMQHAYFMSQFVRILLTDHPELNTRENVQYVYDAMASAAGLEQEWA 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM---SEVIDLKKEK 117
              +     G++      Y++++ N+R  Q+GL  LF   +NP PW+   S+ +  + + 
Sbjct: 267 -AVILADIDGIDLGEFNGYVEYLVNKRLRQLGLSNLFPERDNPMPWIHVFSDTMMNQTKS 325

Query: 118 NFFETRVTEY 127
           +FFE +   Y
Sbjct: 326 DFFEQKSRSY 335


>gi|326784150|ref|YP_004324543.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1]
 gi|310004882|gb|ADO99273.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1]
          Length = 395

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 6/112 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES H+    +++N+ K  ++P +    +E ++    M ++    E+
Sbjct: 243 MEGNAKIISLIARDESQHMTITQNILNKWKQGDDPDMVEIAQEEEKNVYEMFNKCVEEEV 302

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPW 106
            +A      G  +GLNA   ++Y+++ ANRR   IGL+P F    + NP PW
Sbjct: 303 IWADYLFRDGSMIGLNAKLLQKYVEWTANRRMKSIGLKPTFDAPLSNNPLPW 354


>gi|109898789|ref|YP_662044.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas atlantica T6c]
 gi|109701070|gb|ABG40990.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Pseudoalteromonas atlantica T6c]
          Length = 376

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 21/125 (16%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTM 48
           M G ++  + I RDE+LHL     ++N        LW K            E+++++  +
Sbjct: 225 MEGNSKIIRLISRDENLHLTSTQHILN--------LWAKGKDDPEMAEIALEYKEEATNI 276

Query: 49  LHEATLLEIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A   E  +A      G  +GLN     QY++FIAN R   IGL+  F    NP PWM
Sbjct: 277 FLDAVNQEKEWAEYLFQNGSMIGLNKDILCQYVEFIANHRMSAIGLDQPFDIKNNPLPWM 336

Query: 108 SEVID 112
           +  ++
Sbjct: 337 NNYLN 341


>gi|315644971|ref|ZP_07898099.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
 gi|315279682|gb|EFU42984.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
          Length = 343

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 5/131 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  ++   YI RDE+ H  F  +V  Q+  + P L ++E        +  A  LE  +A
Sbjct: 202 MMATSQMISYIQRDENQHCYFFAEVFKQLLKDFPELNSQENIDYLYRTIDRAVELETNWA 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID--LKKEK 117
           H T+     G++      Y+++IANRR   +GLE  ++  + N  PW+    D  L   K
Sbjct: 262 HYTL-SNVRGIDLNELGDYIKYIANRRITMMGLEKAYQGVDVNCMPWIKPFSDEALNATK 320

Query: 118 -NFFETRVTEY 127
            +FFE +   Y
Sbjct: 321 TDFFEAKSRNY 331


>gi|257373022|ref|YP_003175796.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286]
 gi|257167746|gb|ACV49438.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286]
          Length = 336

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 67/133 (50%), Gaps = 4/133 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GIA   +   ++E +H  FG++++  I+ ENP L+ ++F+++ +    +A   E+     
Sbjct: 195 GIANAVEATSKEEQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQQAFEAEMKILDW 254

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKN 118
              +G +  L     + +++   N+    +G+EP+F+  E+      W  E I + K+ +
Sbjct: 255 IFGEGELEFLPRAHVDAFLRDRFNQSLENVGVEPIFEPDEDLLEETRWFDEDIMMTKDND 314

Query: 119 FFETRVTEYQQGA 131
           FF  R T Y + A
Sbjct: 315 FFSKRSTTYNKHA 327


>gi|326782198|ref|YP_004322599.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
 gi|310004405|gb|ADO98798.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
          Length = 395

 Score = 53.5 bits (127), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTKEFQQKSRT--MLHEATLLEI 57
           M G A+    I RDES HL     +I + +  ++  +     ++KS    M   A   E 
Sbjct: 243 MEGSAKIISLIARDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKSNVLKMFKNAVEEEK 302

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLK 114
           A+A      G  +GLN     QY++F ANRR   IGL+P++  +   NP PW    ++ K
Sbjct: 303 AWASYLFKNGSMIGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSK 362

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G G+K D
Sbjct: 363 GQQNAPQETEIESYVIG-GIKQD 384


>gi|332174213|gb|AEE23467.1| Ribonucleoside-diphosphate reductase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 376

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 21/125 (16%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTM 48
           M G ++  + I RDE+LHL     ++N        LW K            E++Q++  +
Sbjct: 225 MEGNSKIIRLISRDENLHLTSTQHILN--------LWAKGKDDPEMAEIAIEYKQQATDI 276

Query: 49  LHEATLLEIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A   E  +A      G  +GLN     QY++FIAN R   IGL   F    NP PWM
Sbjct: 277 FLDAVNQEKEWAEYLFQNGSMIGLNKDILCQYVEFIANHRMSAIGLGQPFDIKNNPLPWM 336

Query: 108 SEVID 112
           +  ++
Sbjct: 337 NNYLN 341


>gi|237732274|ref|ZP_04562755.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
 gi|226907813|gb|EEH93731.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
          Length = 376

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A L E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|254361270|ref|ZP_04977413.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           PHL213]
 gi|153092766|gb|EDN73809.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           PHL213]
          Length = 376

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIEN--PHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +   N  P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAYGNDDPEMAEIARECRQEAYELFLSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            A+A      G  +GLN     QY+++I N R   +GL   FK   NP PW++
Sbjct: 285 KAWAEYLFKDGSMIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWIN 337


>gi|283832326|ref|ZP_06352067.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
 gi|291071973|gb|EFE10082.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
          Length = 376

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A L E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|261493906|ref|ZP_05990416.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261495801|ref|ZP_05992236.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261308535|gb|EEY09803.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261310439|gb|EEY11632.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 376

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIEN--PHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +   N  P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMTYGNDDPEMAEIARECRQEAYELFLSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            A+A      G  +GLN     QY+++I N R   +GL   FK   NP PW++
Sbjct: 285 KAWAEYLFKDGSMIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWIN 337


>gi|122921307|pdb|2O1Z|A Chain A, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
           (Pv086155)
 gi|122921308|pdb|2O1Z|B Chain B, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
           (Pv086155)
          Length = 311

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 57/105 (54%), Gaps = 8/105 (7%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + ++ + P       ++  + ++ EA  +E ++  E
Sbjct: 213 GLTFSNELISRDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICE 265

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
           ++P   +G+N+    QY++F+A+R    +G   +F + +NPF WM
Sbjct: 266 SLPCDLIGMNSRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWM 309


>gi|33519930|ref|NP_878762.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Blochmannia floridanus]
 gi|33504276|emb|CAD83168.1| ribonucleoside-diphosphate reductase 1 beta chain [Candidatus
           Blochmannia floridanus]
          Length = 376

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWTKEF--QQKSRTMLHEATLLE 56
           M G A+  ++I RDESLHLN    ++N ++   ++P +       Q++S  +   A   E
Sbjct: 225 MEGNAKIIRFIARDESLHLNATQHILNLMRSGSDDPEMVDISLICQEESYNLFLMAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +AH     G  +GLN     QY+++I N R   IGL+  F    N  PW++
Sbjct: 285 KTWAHYLFKDGSMIGLNKEILCQYIEYITNIRMQAIGLKTPFNTKTNSIPWIN 337


>gi|326783148|ref|YP_004323545.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
 gi|310005566|gb|ADO99954.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
          Length = 394

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK---EFQQKSRTMLHEATLLEI 57
           M G A+    I RDES HL     +I + +  +     +   E +     M   A   E 
Sbjct: 242 MEGSAKIISLIARDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKPNVLKMFQNAVEEEK 301

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLK 114
           A+A      G  +GLN     QY++F ANRR   IGL+P++  +   NP PW    ++ K
Sbjct: 302 AWAQYLFKNGSMIGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSK 361

Query: 115 KEKNFF-ETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G G+K D
Sbjct: 362 GQQNAPQETEIESYVIG-GIKQD 383


>gi|326782458|ref|YP_004322858.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
 gi|310003406|gb|ADO97803.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
          Length = 386

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRT--MLHEATLLEI 57
           M G A+    I RDES HL    +++ N    ++P +     +++     M  +    E 
Sbjct: 234 MEGSAKILSLIARDESQHLVITQNILKNWRDGDDPEMQQIALEEEENVIKMFAKTVDEEK 293

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 114
           A+A      G  +GLN     QY+++IANRR   IGL+P++      NP PW    ++ K
Sbjct: 294 AWAEYLFKDGSMIGLNDRLLSQYVEWIANRRMKAIGLKPMYNVPAKSNPLPWTEHWLNSK 353

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G G+K D
Sbjct: 354 GQQNAPQETEIESYVIG-GIKQD 375


>gi|303389600|ref|XP_003073032.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
           intestinalis ATCC 50506]
 gi|303302176|gb|ADM11672.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
           intestinalis ATCC 50506]
          Length = 326

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 10/130 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F   +  +        + K+  ++ + ++ +A  +E  + 
Sbjct: 190 MPGLTFSNELISRDEGLHCEFACLLHRR--------YLKQKCKRVKEVVMDAVEVEKRFL 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     +Y++F+A+     +  E ++ +T NPF +M E I L  + NFF
Sbjct: 242 SESLPVDLIGMNCQLMCKYIEFVADTLLENLEEEKIY-HTPNPFDFM-ENISLVGKTNFF 299

Query: 121 ETRVTEYQQG 130
           + R ++YQ+ 
Sbjct: 300 DKRESQYQKA 309


>gi|326782536|ref|YP_004323092.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
 gi|310002750|gb|ADO97149.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
          Length = 386

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK-IENPHLW--TKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES HL    +++ + K  ++P +    KE Q     M       E 
Sbjct: 234 MEGSAKILSLIARDESQHLVITQNILRKWKEGDDPEMAVIAKEEQPFVAEMFKRTVNEEK 293

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 114
            +A     +G  +GLN      Y+++IANRR   IGL+P+F      NP PW    ++ K
Sbjct: 294 MWADYLFKQGSMIGLNDRLLHNYVEWIANRRMKAIGLDPIFDVPAKNNPLPWTEHWLNSK 353

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G G+K D
Sbjct: 354 GQQNAPQETEIESYVVG-GIKQD 375


>gi|330829606|ref|YP_004392558.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
           protein [Aeromonas veronii B565]
 gi|328804742|gb|AEB49941.1| Ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Aeromonas veronii B565]
          Length = 393

 Score = 52.8 bits (125), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q    +  EA + E
Sbjct: 241 MEGNAKIIKMIARDEALHLTGTQHMLNLMRTGQDDPEMAEIAAECEQACFEIFKEAAIQE 300

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+P F  T +NP PW++
Sbjct: 301 KEWAEYLFQDGSMIGLNKDILCQYVEYITNLRMSAVGLQPAFAGTKQNPIPWIN 354


>gi|326784253|ref|YP_004324793.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
 gi|310003484|gb|ADO97880.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
          Length = 388

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK-IENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES HL    +++ + K  ++P +    KE +   + M       E 
Sbjct: 236 MEGSAKILSLIARDESQHLVITQNILRKWKEGDDPEMKEIAKEEKGWVQHMFERTVNEEK 295

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 114
            +A     +G  +GLN      Y+++IANRR   IGL+P+F      NP PW    ++ K
Sbjct: 296 VWADYLFKQGSMIGLNDRLLHNYVEWIANRRMKSIGLDPMFDIPAKNNPLPWTEHWLNSK 355

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G G+K D
Sbjct: 356 GQQNAPQETEIESYVVG-GIKQD 377


>gi|259907948|ref|YP_002648304.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia
           pyrifoliae Ep1/96]
 gi|224963570|emb|CAX55060.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           pyrifoliae Ep1/96]
 gi|283477829|emb|CAY73745.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           pyrifoliae DSM 12163]
 gi|310768143|gb|ADP13093.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia sp.
           Ejp617]
          Length = 376

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    KE +Q+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R + +GL+  FK   NP PW++
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWIN 337


>gi|221134587|ref|ZP_03560892.1| ribonucleotide-diphosphate reductase subunit beta [Glaciecola sp.
           HTCC2999]
          Length = 376

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G ++  + I RDE+LHL     V+N      ++P +    KE +Q++R +   A   E
Sbjct: 225 MEGNSKIIRLIARDENLHLTSTQHVLNLWAKGKDDPEMAEIAKECEQEARDIFLNAVQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
             +A      G  +GLN      Y+++IAN+R   IGL   F  + NP PWM+  ++
Sbjct: 285 KEWAAFLFNNGSMIGLNEEILCSYVEYIANQRMAAIGLGQPFDVSSNPLPWMNNYLN 341


>gi|89092731|ref|ZP_01165684.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
           sp. MED92]
 gi|89083243|gb|EAR62462.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
           sp. MED92]
          Length = 376

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P      KE +Q    +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNIMASGADDPDYKDIAKECEQDVYNIFKEAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A     +G  +GLNA     Y+++I N R   + LE +F   +NP PWM+
Sbjct: 285 KDWAQYLFREGSMIGLNAQILSDYVEYITNVRMKALNLEEIFPARQNPLPWMN 337


>gi|221316490|ref|ZP_03598295.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
          Length = 347

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 6/141 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G     QYI RDE  H  F   ++  I  + P L T+EF +       E   LE  + 
Sbjct: 206 MFGTGTVIQYIQRDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFC 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS--EVIDLKKEK- 117
            E + K    ++    ++Y+ + AN     +GL+ +F   +NP PW++  +  +L   K 
Sbjct: 266 -EDLYKNTPDIDIEEVKEYIGYRANLILDNLGLDQIFSAKKNPMPWITAFDPDNLNNTKR 324

Query: 118 NFFETRVTEYQQGAGLK--WD 136
           +FFE +   Y +    K  WD
Sbjct: 325 DFFEDKEVNYGKANEQKNDWD 345


>gi|45686047|ref|YP_003810.1| unknown [Ambystoma tigrinum virus]
 gi|37722471|gb|AAP33216.1| unknown [Ambystoma tigrinum stebbensi virus]
          Length = 387

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 10/138 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLL 55
           M G+ +  ++ +RDE++H+     +   +  E P + T++      +   R    E   +
Sbjct: 241 MKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTEDLIELFKEDAERVAELEEAFV 300

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDL 113
           ++A+  E  P    GL     + Y+ ++ N R   +GL  L +      P PW+  +ID 
Sbjct: 301 DLAF-QECGP--VCGLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDG 357

Query: 114 KKEKNFFETRVTEYQQGA 131
               NFFE  VTEY+ G 
Sbjct: 358 ADLTNFFENHVTEYETGG 375


>gi|188533366|ref|YP_001907163.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia
           tasmaniensis Et1/99]
 gi|188028408|emb|CAO96269.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           tasmaniensis Et1/99]
          Length = 376

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    KE +Q+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R + +GL+  FK   NP PW++
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWIN 337


>gi|292488819|ref|YP_003531706.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia
           amylovora CFBP1430]
 gi|292899970|ref|YP_003539339.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia
           amylovora ATCC 49946]
 gi|291199818|emb|CBJ46941.1| ribonucleoside-diphosphate reductase 1 beta subunit [Erwinia
           amylovora ATCC 49946]
 gi|291554253|emb|CBA21550.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           amylovora CFBP1430]
 gi|312172977|emb|CBX81232.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           amylovora ATCC BAA-2158]
          Length = 376

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    KE +Q+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R + +GL+  FK   NP PW++
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILWQYIEYITNIRMNAVGLDLPFKTRSNPIPWIN 337


>gi|172058301|ref|YP_001814761.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
           sibiricum 255-15]
 gi|171990822|gb|ACB61744.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sibiricum
           255-15]
          Length = 347

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 6/134 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAY 59
           MVG +    YI RDE  H  F   ++  +  E+P +     F +        A  LEI +
Sbjct: 205 MVGTSTMISYIQRDELQHSYFISQLLRAVLTEHPDIDADGSFTKFVYATFERAVDLEIEW 264

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK---K 115
           + E + +   GL+      Y++++AN+R   IGL+ L++ + E+  PW+    D      
Sbjct: 265 S-EYVLRDLDGLDVSEMRDYVKYLANKRLRVIGLDDLYEGHDEDVMPWIRAYSDDSMNAT 323

Query: 116 EKNFFETRVTEYQQ 129
           + +FFE +   Y +
Sbjct: 324 KSDFFEQKSRSYAK 337


>gi|145298925|ref|YP_001141766.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851697|gb|ABO90018.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 377

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +   + E +Q    +  EA + E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHMLNLMRTGQDDPEMAEISAECEQACFEIFKEAAIQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R + +GL+P F    +NP PW++
Sbjct: 285 KEWAEYLFQDGSMIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWIN 338


>gi|300717619|ref|YP_003742422.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           billingiae Eb661]
 gi|299063455|emb|CAX60575.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           billingiae Eb661]
          Length = 376

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL----E 56
           M G A+  + I RDE+LHL     ++N ++         E  ++SR   ++  +L    E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGEDDPEMAEIARESRQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R H +GL+  FK   NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYIEYITNIRMHAVGLDLPFKTRSNPIPWIN 337


>gi|488081|gb|AAA56996.1| ribonucleoside-diphosphate reductase small subunit [Drosophila
           melanogaster]
          Length = 214

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 60/113 (53%), Gaps = 9/113 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 108 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFL 160

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL 113
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L
Sbjct: 161 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISL 211


>gi|58532963|ref|YP_195186.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2]
 gi|58331430|emb|CAF34216.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2]
          Length = 394

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES H+    ++IN+ K  ++P +    K+ +     M  +    EI
Sbjct: 242 MEGNAKIISLIARDESQHMTITQNIINKWKAGDDPDMVEIAKQEENNVYDMFKKCVEEEI 301

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPW 106
            +A      G  +GLNA   ++Y+++ ANRR   IG++ +F    + NP PW
Sbjct: 302 IWADYLFRDGSMIGLNAKLLQKYVEWTANRRMKAIGMKQIFDVPLSNNPLPW 353


>gi|13358428|ref|NP_078636.1| Ribonucleotide reductase small subunit [Lymphocystis disease virus
           1]
          Length = 378

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---- 56
           M G+ +  ++ +RDE++H+     +      E   + T+EF    R +  E   LE    
Sbjct: 240 MKGMGKVIEWSIRDENIHVEGLCKLFKTFISEYSFILTEEFFSAVRKIQAEVLQLETDFI 299

Query: 57  -IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGL-EPLFKYTENPFPWMSEVIDLK 114
            + + + T  KG   L   +   Y+++I  RR  Q+GL E       NP  W+S +I  +
Sbjct: 300 ILLFTNITEIKGLTKLCMIN---YVKYILQRRTEQLGLLESTEVLLTNPIDWISWLIAGR 356

Query: 115 KEKNFFETRVTEYQ 128
              NFFE RVTEY 
Sbjct: 357 NITNFFENRVTEYD 370


>gi|255026984|ref|ZP_05298970.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J2-003]
          Length = 336

 Score = 52.0 bits (123), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 7/125 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF 119
            E + +G  G++      Y+++ AN+    +G+  L+  +++N   W+    D     NF
Sbjct: 269 EEVL-QGIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYAD-----NF 322

Query: 120 FETRV 124
            ET+ 
Sbjct: 323 TETKT 327


>gi|83592781|ref|YP_426533.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
           rubrum ATCC 11170]
 gi|83575695|gb|ABC22246.1| Ribonucleoside-diphosphate reductase [Rhodospirillum rubrum ATCC
           11170]
          Length = 358

 Score = 52.0 bits (123), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 31/152 (20%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH   GI       I   H W +E    ++ +  +  +L++A  
Sbjct: 195 MKGMGQIVTWSVRDESLHCQ-GI-------IRLFHEWNRETGALTKPVRDD--ILDVATT 244

Query: 61  HETMPKGFV----------GLNAPSCEQYMQFIANRRCHQIGLEPL---FKYTE------ 101
              + + FV          G+ A   + Y++++A+ R  Q+ L  L   F+ TE      
Sbjct: 245 MVGLEEKFVDLAFELGAIEGMRAEDIKSYVRYVADWRLTQLKLPILYGHFRETEAGYEQL 304

Query: 102 --NPFPWMSEVIDLKKEKNFFETRVTEYQQGA 131
             +P PW+ E+++  +  NFFE R TEY + A
Sbjct: 305 RPHPLPWLVEILNGVEHANFFEQRSTEYSKAA 336


>gi|323650974|ref|YP_004243617.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. natto]
 gi|323461614|dbj|BAJ77030.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. natto]
          Length = 347

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G     QYI RDE  H  F   ++  I  + P L T+EF +       E   LE  + 
Sbjct: 206 MFGTGTVIQYIQRDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFC 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS--EVIDLKKEK- 117
            E + K    ++    ++Y+ + AN     +GL+ +F   +NP PW++  +  +L   K 
Sbjct: 266 -EDLYKNTPDIDIEEVKEYIGYRANLILDNLGLDQIFAAKKNPMPWITAFDPDNLNNTKR 324

Query: 118 NFFETRVTEYQQGAGLKWD 136
           +FFE +   Y +    K D
Sbjct: 325 DFFEDKEVNYGKANEQKND 343


>gi|157144813|ref|YP_001452132.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter
           koseri ATCC BAA-895]
 gi|157082018|gb|ABV11696.1| hypothetical protein CKO_00540 [Citrobacter koseri ATCC BAA-895]
          Length = 376

 Score = 52.0 bits (123), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  I++P +    +E +Q    +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGIDDPEMAEIAEESKQACYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLE  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLELPFQTRSNPIPWIN 337


>gi|300723737|ref|YP_003713044.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
           nematophila ATCC 19061]
 gi|297630261|emb|CBJ90912.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
           nematophila ATCC 19061]
          Length = 376

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    KE +QK   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQKCYDLFVDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFKDGSMIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWIN 337


>gi|283786035|ref|YP_003365900.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter
           rodentium ICC168]
 gi|282949489|emb|CBG89102.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter
           rodentium ICC168]
          Length = 376

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A L E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|61806080|ref|YP_214440.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
 gi|61374589|gb|AAX44586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
 gi|265525292|gb|ACY76089.1| NrdB [Prochlorococcus phage P-SSM2]
          Length = 384

 Score = 51.6 bits (122), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 6/120 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI-KIENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDE+ HL    +++N   K ++P +    KE +Q +  M  +    E 
Sbjct: 232 MEGSAKIISLIARDENQHLAITQNILNNWRKGDDPEMVEIMKEEEQWTYQMFEKCVNEEK 291

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLK 114
            +A      G  +GLN     QY++++ANRR   IG++P++      NP PW    I  K
Sbjct: 292 MWAEYLFKDGSMIGLNDKLLHQYVEWVANRRMRSIGMKPVYDIAAKNNPLPWTEHWISSK 351


>gi|90407600|ref|ZP_01215781.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp.
           CNPT3]
 gi|90311303|gb|EAS39407.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp.
           CNPT3]
          Length = 424

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 24/143 (16%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTML-----HEATLLEI 57
           GI+   +   ++E LH NFGID+I  IK ENP  + +E+QQ  RT+       E+ +++ 
Sbjct: 283 GISNVVEATSKEEQLHGNFGIDLIQIIKQENPSWFNEEYQQSVRTLCLQAFKSESKIIDW 342

Query: 58  AYAH---ETMPKGFVGLNAPSCEQYMQFIANR---RCHQIGLEPLFKYTENPF---PWMS 108
            YA    + +PK           Q  +FI NR       I +E +F+  E       W  
Sbjct: 343 IYAEGELDFIPKA----------QVKEFIKNRFNQSLQSIDIEKVFEIDEKLLEKTEWFD 392

Query: 109 EVIDLKKEKNFFETRVTEYQQGA 131
           + I   K  +FF  R   Y + +
Sbjct: 393 DEIIGTKHGDFFVKRSINYNKRS 415


>gi|304414248|ref|ZP_07395616.1| ribonucleotide reductase beta subunit [Candidatus Regiella
           insecticola LSR1]
 gi|304283462|gb|EFL91858.1| ribonucleotide reductase beta subunit [Candidatus Regiella
           insecticola LSR1]
          Length = 381

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++   ++P +    KE Q     +  +A   E
Sbjct: 230 MEGNAKIIKLIARDEALHLTGTQHIINLMREGTDDPEMAEIAKECQNNCFELFKKAAEQE 289

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   FK   NP PW++
Sbjct: 290 KEWATYLFRDGSMIGLNKDILCQYIEYITNIRMQAVGLALPFKIRSNPIPWIN 342


>gi|117619492|ref|YP_856857.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117560899|gb|ABK37847.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 377

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q    +  EA + E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHMLNLMRSGQDDPEMAEIAAECEQACFELFKEAAIQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R + +GL+P F    +NP PW++
Sbjct: 285 KEWAEYLFQDGSMIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWIN 338


>gi|52425023|ref|YP_088160.1| ribonucleotide-diphosphate reductase subunit beta [Mannheimia
           succiniciproducens MBEL55E]
 gi|52307075|gb|AAU37575.1| NrdF protein [Mannheimia succiniciproducens MBEL55E]
          Length = 376

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            A+A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KAWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|226327851|ref|ZP_03803369.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
 gi|225203555|gb|EEG85909.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
          Length = 376

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAEECEQECYDLFVEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A     +G  +GLN     QY+++I N R   +GL+  FK   NP PW++
Sbjct: 285 KEWAEYLFSEGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFKARSNPIPWIN 337


>gi|152979144|ref|YP_001344773.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           succinogenes 130Z]
 gi|150840867|gb|ABR74838.1| Ribonucleoside-diphosphate reductase [Actinobacillus succinogenes
           130Z]
          Length = 376

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            A+A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KAWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFEARSNPIPWIN 337


>gi|293401949|ref|ZP_06646089.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304607|gb|EFE45856.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 347

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T    ++ + ML      EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRSMILELQKEEPQLFTPALVEEYKDMLRYGVEEEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKKEK 117
              +     GL      +Y+ ++ N R   +G   L++ Y + P    W+S   +    K
Sbjct: 267 SYVIGNDIEGLTMQMVREYIYYLGNLRSTSLGFGTLYEGYEKEPASMEWVSMYANANLIK 326

Query: 118 -NFFETRVTEYQQGAGL 133
            +FFE R + Y + + L
Sbjct: 327 TDFFEARSSAYAKSSAL 343


>gi|326784480|ref|YP_004325029.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
 gi|310004513|gb|ADO98905.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
          Length = 388

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 25/152 (16%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK------------EFQQKSRTM 48
           M G A+    I RDES HL     V+ Q  ++N   WT+            E Q+    M
Sbjct: 235 MEGSAKILSLIARDESQHL-----VLTQQILKN---WTEGKDDPEMKEIAEEEQETVEQM 286

Query: 49  LHEATLLEIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFP 105
                  E A+A+    +G  +GLN      Y+++IANRR   IGL+P++      NP P
Sbjct: 287 FKACVDEEKAWANYLFKEGSMIGLNERLLHNYVEWIANRRMKAIGLKPIYDQPLRNNPLP 346

Query: 106 WMSEVIDLKKEKNF-FETRVTEYQQGAGLKWD 136
           W    ++ K ++N   ET +  Y  G G+K D
Sbjct: 347 WTEHWLNSKGQQNAPQETEIESYVVG-GIKQD 377


>gi|145633337|ref|ZP_01789068.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae 3655]
 gi|144986183|gb|EDJ92773.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae 3655]
          Length = 376

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            A+A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KAWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWIN 337


>gi|163748931|ref|ZP_02156182.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
           benthica KT99]
 gi|161331307|gb|EDQ02195.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
           benthica KT99]
          Length = 376

 Score = 51.2 bits (121), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++  ++  +++P +    +E +Q +  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILKIMRAGVDDPEMGEIAEECEQLAYDIFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY+++I N R   + L P +    NP PWM
Sbjct: 285 KEWAQYLFKDGSMIGLNEAILCQYVEYITNERMKSVNLTPHYDEITNPLPWM 336


>gi|289664735|ref|ZP_06486316.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 349

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   E           A  LE  + 
Sbjct: 209 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETVWT 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 269 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 328 DFFEMRNASYKK 339


>gi|148825799|ref|YP_001290552.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittEE]
 gi|148715959|gb|ABQ98169.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittEE]
          Length = 376

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            A+A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KAWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWIN 337


>gi|16273547|ref|NP_439802.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae Rd KW20]
 gi|68250262|ref|YP_249374.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 86-028NP]
 gi|145629252|ref|ZP_01785051.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.1-21]
 gi|145631490|ref|ZP_01787259.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|145639184|ref|ZP_01794791.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittII]
 gi|145641092|ref|ZP_01796673.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|260581255|ref|ZP_05849073.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae RdAW]
 gi|260582634|ref|ZP_05850423.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae NT127]
 gi|319776092|ref|YP_004138580.1| ribonucleoside-diphosphate reductase subunit beta [Haemophilus
           influenzae F3047]
 gi|319896901|ref|YP_004135096.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3031]
 gi|329123256|ref|ZP_08251824.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           aegyptius ATCC 11116]
 gi|1172943|sp|P43755|RIR2_HAEIN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1574510|gb|AAC23306.1| ribonucleoside diphosphate reductase, beta chain (nrdB)
           [Haemophilus influenzae Rd KW20]
 gi|68058461|gb|AAX88714.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae 86-028NP]
 gi|144978755|gb|EDJ88478.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.1-21]
 gi|144982920|gb|EDJ90433.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|145271746|gb|EDK11656.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittII]
 gi|145274253|gb|EDK14118.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.4-21]
 gi|260092082|gb|EEW76027.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae RdAW]
 gi|260094306|gb|EEW78205.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae NT127]
 gi|301170418|emb|CBW30024.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Haemophilus influenzae 10810]
 gi|309750762|gb|ADO80746.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus
           influenzae R2866]
 gi|309972945|gb|ADO96146.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus
           influenzae R2846]
 gi|317432405|emb|CBY80760.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3031]
 gi|317450683|emb|CBY86903.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3047]
 gi|327471465|gb|EGF16913.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           aegyptius ATCC 11116]
          Length = 376

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            A+A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KAWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWIN 337


>gi|260772919|ref|ZP_05881835.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           metschnikovii CIP 69.14]
 gi|260612058|gb|EEX37261.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           metschnikovii CIP 69.14]
          Length = 377

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++  +++       +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGLDDFTFLQIAEECKQQCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLEP + K T NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNRDILCQYVEYITNIRMQAVGLEPAYPKATSNPIPWIN 338


>gi|78049716|ref|YP_365891.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78038146|emb|CAJ25891.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 347

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   E           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHTKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|326782933|ref|YP_004323331.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
 gi|310004192|gb|ADO98586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
          Length = 388

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 16/147 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQK-------SRTMLHEA 52
           M G A+    I RDES HL    +++ N  K ++  +     ++K        RT+  E 
Sbjct: 236 MEGSAKILSLIARDESQHLVITQNILKNWAKGDDSEMAEIAKEEKPFVVDMFKRTVEEEK 295

Query: 53  TLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEV 110
           T     +   +M    +GLN      Y+++IANRR   IGL+P+F      NP PW    
Sbjct: 296 TWANYLFREGSM----IGLNDRLLHNYVEWIANRRMKAIGLDPVFDQVARNNPLPWTQHW 351

Query: 111 IDLKKEKNF-FETRVTEYQQGAGLKWD 136
           ++ K ++N   ET +  Y  G G+K D
Sbjct: 352 LNSKGQQNAPQETEIESYVVG-GIKQD 377


>gi|213646443|ref|ZP_03376496.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
 gi|289824706|ref|ZP_06544205.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
          Length = 240

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 89  MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 148

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 149 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 201


>gi|319760602|ref|YP_004124540.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus
           Blochmannia vafer str. BVAF]
 gi|318039316|gb|ADV33866.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus
           Blochmannia vafer str. BVAF]
          Length = 376

 Score = 51.2 bits (121), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 5/114 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDESLHL+    ++N  Q   ++P +   +  +Q +S  +   A   E
Sbjct: 225 MEGNAKIIRFIARDESLHLSATQHILNLMQSGADDPEMAEISLMYQSESYNLFLMAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 109
             +AH     G  +GLN     QY+++I N R   IGL+  F    N  PW++ 
Sbjct: 285 KMWAHYLFKDGSMIGLNKEILCQYIEYITNIRMQAIGLKAPFHIKANVIPWINS 338


>gi|222475861|ref|YP_002564382.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239]
 gi|222454232|gb|ACM58496.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239]
          Length = 336

 Score = 50.8 bits (120), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 4/131 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GIA   +   ++E +H  FG+++++ I+ ENP L+  EF+ + R     A   E+     
Sbjct: 195 GIANAVEATSKEEQIHGLFGVELVDTIREENPGLFDDEFEAEIREACRRAYEAEMGMLDW 254

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKN 118
              +G +  L      ++++   N+    +G+ P+F+  ++      W  E I + K+ +
Sbjct: 255 IFGEGELQFLPREYVNEFLKDRFNQSLENVGVYPMFETDDDLLDETRWFDEDIMMTKDND 314

Query: 119 FFETRVTEYQQ 129
           FF  R T Y +
Sbjct: 315 FFSKRSTTYNK 325


>gi|197285594|ref|YP_002151466.1| ribonucleotide-diphosphate reductase subunit beta [Proteus
           mirabilis HI4320]
 gi|194683081|emb|CAR43612.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis HI4320]
          Length = 376

 Score = 50.8 bits (120), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A     +G  +GLN     QY+++I N R   +GL+  FK   NP PW++
Sbjct: 285 KEWAEYLFSEGSMIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWIN 337


>gi|227356095|ref|ZP_03840485.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis ATCC 29906]
 gi|227163740|gb|EEI48652.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis ATCC 29906]
          Length = 376

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A     +G  +GLN     QY+++I N R   +GL+  FK   NP PW++
Sbjct: 285 KEWAEYLFSEGSMIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWIN 337


>gi|71892252|ref|YP_277986.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Blochmannia pennsylvanicus str. BPEN]
 gi|71796358|gb|AAZ41109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Blochmannia pennsylvanicus str. BPEN]
          Length = 376

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++N ++   ++P +   + E QQ+S  +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNATQHILNLMRSGSDDPEMADISTECQQESYALFLMAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A+     G  +GLN     QY+++I N R   IGL   F    N  PW++
Sbjct: 285 KNWANYLFKDGSMIGLNKDILCQYIEYITNIRMQAIGLRTPFNIKSNVIPWIN 337


>gi|213021870|ref|ZP_03336317.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 277

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 126 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 185

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 186 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 238


>gi|85059563|ref|YP_455265.1| ribonucleotide-diphosphate reductase subunit beta [Sodalis
           glossinidius str. 'morsitans']
 gi|84780083|dbj|BAE74860.1| ribonucleoside-diphosphate reductase 1 beta subunit [Sodalis
           glossinidius str. 'morsitans']
          Length = 376

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+S  +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTSTQHMLNLMRSGEDDPEMAEIARECQQESYDLFLLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 285 KEWASYLFRDGSMIGLNKDILCQYVEYITNIRMQSVGLDLPFATRSNPIPWIN 337


>gi|229542075|ref|ZP_04431135.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
 gi|229326495|gb|EEN92170.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
          Length = 347

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 4/136 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +    YI RDE  H  F  ++I  +  E+P L T  F         E+  LE  ++
Sbjct: 207 MVGTSTMISYINRDELEHGRFISELIRAVLSEHPELNTPAFSDWVYARFRESVDLETEWS 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E + +   G++      ++++ AN+    IGL  L+ ++ ENP  W+    D     + 
Sbjct: 267 -EYVLQDVEGIDLEEMAGFIKYRANKMLRMIGLSELYPEHVENPMKWIRAYADNFDATKT 325

Query: 118 NFFETRVTEYQQGAGL 133
           +FFE +   Y + + L
Sbjct: 326 DFFEQKSRSYTKVSDL 341


>gi|56412825|ref|YP_149900.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197361758|ref|YP_002141394.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|56127082|gb|AAV76588.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197093234|emb|CAR58679.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 376

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|320538993|ref|ZP_08038668.1| putative ribonucleoside diphosphate reductase 1, beta subunit,
           ferritin-like protein [Serratia symbiotica str. Tucson]
 gi|320030926|gb|EFW12930.1| putative ribonucleoside diphosphate reductase 1, beta subunit,
           ferritin-like protein [Serratia symbiotica str. Tucson]
          Length = 376

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I+N R   +GLE  FK   NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYISNIRMQAVGLELPFKTRSNPIPWIN 337


>gi|205353394|ref|YP_002227195.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205273175|emb|CAR38137.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|326628485|gb|EGE34828.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 376

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|76803441|ref|YP_327710.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas
           pharaonis DSM 2160]
 gi|76559256|emb|CAI50863.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas
           pharaonis DSM 2160]
          Length = 336

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 4/133 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GIA   +   ++E +H  FG++++  I+ ENP L+ ++F+++ +     A   E+     
Sbjct: 195 GIANAVEATSKEEQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQRAFEAEMKILDW 254

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKN 118
              +G +  L     + +++   N+    +G+EP+F+  +       W  E I + K+ +
Sbjct: 255 IFGEGELEFLPRTHVDAFLRDRFNQSLENVGVEPIFEPDDGLLEETRWFDEDIMMTKDND 314

Query: 119 FFETRVTEYQQGA 131
           FF  R T Y + A
Sbjct: 315 FFSKRSTTYNKHA 327


>gi|153819185|ref|ZP_01971852.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
           cholerae NCTC 8457]
 gi|126510271|gb|EAZ72865.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
           cholerae NCTC 8457]
          Length = 171

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++            +E +Q+S  +  EA   E
Sbjct: 19  MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQE 78

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLEP +   T NP PW++
Sbjct: 79  KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 132


>gi|225734460|gb|ACO25228.1| hypothetical protein [Epizootic haematopoietic necrosis virus]
          Length = 387

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 10/138 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLL 55
           M G+ +  ++ +RDE++H+     +   +  E P +  ++      +   R    E   +
Sbjct: 241 MKGMGKVVEWSVRDENMHVEGVSKLFETLNSEYPWVVNEDLIELFKEDAERVAELEEAFV 300

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDL 113
           ++A+  E  P    GL     + Y+ ++ N R   +GL  L +      P PW+  +ID 
Sbjct: 301 DLAF-QECGP--VCGLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDG 357

Query: 114 KKEKNFFETRVTEYQQGA 131
               NFFE  VTEY+ G 
Sbjct: 358 ADLTNFFENHVTEYETGG 375


>gi|161502570|ref|YP_001569682.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160863917|gb|ABX20540.1| hypothetical protein SARI_00614 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 376

 Score = 50.8 bits (120), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMADIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|16765605|ref|NP_461220.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|62180851|ref|YP_217268.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161613001|ref|YP_001586966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167549728|ref|ZP_02343487.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992612|ref|ZP_02573709.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168237293|ref|ZP_02662351.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168242393|ref|ZP_02667325.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168261709|ref|ZP_02683682.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168466025|ref|ZP_02699895.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168817991|ref|ZP_02829991.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194442577|ref|YP_002041539.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194449379|ref|YP_002046332.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194735273|ref|YP_002115349.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197247637|ref|YP_002147234.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197262505|ref|ZP_03162579.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198242288|ref|YP_002216347.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200387602|ref|ZP_03214214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929071|ref|ZP_03220214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|207857697|ref|YP_002244348.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|213161593|ref|ZP_03347303.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|224583238|ref|YP_002637036.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|1172945|sp|P37427|RIR2_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|510349|emb|CAA51453.1| nrdB [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|16420817|gb|AAL21179.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|62128484|gb|AAX66187.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161362365|gb|ABX66133.1| hypothetical protein SPAB_00707 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401240|gb|ACF61462.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194407683|gb|ACF67902.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194710775|gb|ACF89996.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195631367|gb|EDX49927.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197211340|gb|ACH48737.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197240760|gb|EDY23380.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197289678|gb|EDY29041.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197936804|gb|ACH74137.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199604700|gb|EDZ03245.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204321615|gb|EDZ06814.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205325266|gb|EDZ13105.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329222|gb|EDZ15986.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205338588|gb|EDZ25352.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205344845|gb|EDZ31609.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205349363|gb|EDZ35994.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709500|emb|CAR33844.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224467765|gb|ACN45595.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|261247486|emb|CBG25313.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994368|gb|ACY89253.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301158836|emb|CBW18349.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312913268|dbj|BAJ37242.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320086715|emb|CBY96487.1| ribonucleoside diphosphage reductase 1, beta subunit, B2
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321223022|gb|EFX48093.1| Ribonucleotide reductase of class Ia aerobic, beta subunit
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322617030|gb|EFY13936.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322617664|gb|EFY14563.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624706|gb|EFY21535.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322630255|gb|EFY27025.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322634436|gb|EFY31169.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322639146|gb|EFY35838.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322640143|gb|EFY36809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322645769|gb|EFY42293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651544|gb|EFY47919.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322656105|gb|EFY52404.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322659457|gb|EFY55704.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322665919|gb|EFY62102.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322669843|gb|EFY65984.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322673828|gb|EFY69925.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322678586|gb|EFY74642.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322683618|gb|EFY79632.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322687694|gb|EFY83664.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|322715327|gb|EFZ06898.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
 gi|323130608|gb|ADX18038.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|323196209|gb|EFZ81366.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323198377|gb|EFZ83479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323204185|gb|EFZ89196.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323208571|gb|EFZ93510.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323212337|gb|EFZ97160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218256|gb|EGA02966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323222986|gb|EGA07335.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323227421|gb|EGA11586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323232251|gb|EGA16354.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323235716|gb|EGA19800.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323241124|gb|EGA25160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323244866|gb|EGA28868.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323248577|gb|EGA32508.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323251597|gb|EGA35465.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323255474|gb|EGA39237.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323263076|gb|EGA46622.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323268136|gb|EGA51613.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323270771|gb|EGA54209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
 gi|326624097|gb|EGE30442.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 376

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|16761204|ref|NP_456821.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29141101|ref|NP_804443.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|25285831|pir||AD0791 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503503|emb|CAD07510.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29136727|gb|AAO68292.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
          Length = 376

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|71280050|ref|YP_269047.1| ribonucleotide-diphosphate reductase subunit beta [Colwellia
           psychrerythraea 34H]
 gi|71145790|gb|AAZ26263.1| ribonucleotide reductase, beta subunit [Colwellia psychrerythraea
           34H]
          Length = 376

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 5/111 (4%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLEIA 58
           G A+  + I RDE+LHL     ++N  +   ++P +   ++E + +   +  +    E  
Sbjct: 227 GNAKIIKLIARDEALHLTGTQHILNNWRSGKDDPEMKIISEELRDEGLQIFLDVVEQEKE 286

Query: 59  YAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
           +A      G  +GLNA    QY+++I+N+R   IG    F    NP PWM+
Sbjct: 287 WAQYLFKDGSMIGLNADILNQYIEYISNQRLTAIGFGAPFDIKSNPLPWMN 337


>gi|168229641|ref|ZP_02654699.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194471700|ref|ZP_03077684.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|238913487|ref|ZP_04657324.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|194458064|gb|EDX46903.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205335835|gb|EDZ22599.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 376

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|21244791|ref|NP_644373.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|325927516|ref|ZP_08188754.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
           91-118]
 gi|21110489|gb|AAM38909.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|325542109|gb|EGD13613.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
           91-118]
          Length = 347

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   E           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|88859281|ref|ZP_01133921.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
 gi|88818298|gb|EAR28113.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
          Length = 376

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL+    ++N  Q   ++P +     + +++S  M   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLSGTQHMLNIMQDGQDDPEMAIVAAQLREESIEMFRTAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F  T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNVRMSAVGLPQQFSITSNPIPWIN 337


>gi|58580098|ref|YP_199114.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|84622097|ref|YP_449469.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae MAFF 311018]
 gi|58424692|gb|AAW73729.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
           pv. oryzae KACC10331]
 gi|84366037|dbj|BAE67195.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
           pv. oryzae MAFF 311018]
          Length = 347

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   E           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|327394563|dbj|BAK11985.1| ribonucleoside-diphosphate reductase 1 beta subunit NrdB [Pantoea
           ananatis AJ13355]
          Length = 376

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++        KE   + R     +  +A L E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWIN 337


>gi|188578920|ref|YP_001915849.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188523372|gb|ACD61317.1| ribonucleoside-diphosphate reductase, beta subunit [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 347

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   E           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|166710317|ref|ZP_02241524.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzicola BLS256]
          Length = 347

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   E           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAINLETQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|121590730|ref|ZP_01678061.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           2740-80]
 gi|147674333|ref|YP_001216820.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           O395]
 gi|153212320|ref|ZP_01948108.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           1587]
 gi|153801907|ref|ZP_01956493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-3]
 gi|153823603|ref|ZP_01976270.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           B33]
 gi|153827294|ref|ZP_01979961.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-2]
 gi|153829732|ref|ZP_01982399.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           623-39]
 gi|227081427|ref|YP_002809978.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           M66-2]
 gi|254291706|ref|ZP_04962493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           AM-19226]
 gi|254848379|ref|ZP_05237729.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
 gi|297578847|ref|ZP_06940775.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
           RC385]
 gi|298498653|ref|ZP_07008460.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MAK 757]
 gi|9655738|gb|AAF94414.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|121547411|gb|EAX57522.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           2740-80]
 gi|124116698|gb|EAY35518.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           1587]
 gi|124122552|gb|EAY41295.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-3]
 gi|126518882|gb|EAZ76105.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           B33]
 gi|146316216|gb|ABQ20755.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O395]
 gi|148874766|gb|EDL72901.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           623-39]
 gi|149738785|gb|EDM53127.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-2]
 gi|150422390|gb|EDN14350.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           AM-19226]
 gi|227009315|gb|ACP05527.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           M66-2]
 gi|227013172|gb|ACP09382.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O395]
 gi|254844084|gb|EET22498.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
 gi|297536441|gb|EFH75274.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
           RC385]
 gi|297542986|gb|EFH79036.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MAK 757]
          Length = 389

 Score = 50.4 bits (119), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++            +E +Q+S  +  EA   E
Sbjct: 237 MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQE 296

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLEP +   T NP PW++
Sbjct: 297 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 350


>gi|119944866|ref|YP_942546.1| ribonucleotide-diphosphate reductase subunit beta [Psychromonas
           ingrahamii 37]
 gi|119863470|gb|ABM02947.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychromonas ingrahamii 37]
          Length = 381

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 5/111 (4%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLWTKEFQ--QKSRTMLHEATLLEIA 58
           G A+  + I RDE+LHLN    ++N      ++P +     +   + R +  +A   E  
Sbjct: 232 GNAKIIKLIARDEALHLNSTQQILNLWADGKDDPEMAEIAIECFAEGREIFLQAAQQEKD 291

Query: 59  YAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
           +A      G  +GLN     QY+++IAN R   IG  P F+   NP PW++
Sbjct: 292 WAKYLFKDGSMIGLNEQILSQYVEYIANLRMQAIGYAPEFEVKSNPIPWIN 342


>gi|291618170|ref|YP_003520912.1| NrdB [Pantoea ananatis LMG 20103]
 gi|291153200|gb|ADD77784.1| NrdB [Pantoea ananatis LMG 20103]
          Length = 387

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++        KE   + R     +  +A L E
Sbjct: 236 MEGNAKIIKLIARDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQE 295

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 296 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWIN 348


>gi|229505158|ref|ZP_04394668.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae BX 330286]
 gi|229511170|ref|ZP_04400649.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae B33]
 gi|229515628|ref|ZP_04405087.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TMA 21]
 gi|229518289|ref|ZP_04407733.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC9]
 gi|229521368|ref|ZP_04410787.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TM 11079-80]
 gi|229525854|ref|ZP_04415259.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae bv. albensis VL426]
 gi|229529665|ref|ZP_04419055.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae 12129(1)]
 gi|229608178|ref|YP_002878826.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           MJ-1236]
 gi|229333439|gb|EEN98925.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae 12129(1)]
 gi|229339435|gb|EEO04452.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae bv. albensis VL426]
 gi|229341466|gb|EEO06469.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TM 11079-80]
 gi|229345004|gb|EEO09978.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC9]
 gi|229347397|gb|EEO12357.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TMA 21]
 gi|229351135|gb|EEO16076.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae B33]
 gi|229357381|gb|EEO22298.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae BX 330286]
 gi|229370833|gb|ACQ61256.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae MJ-1236]
          Length = 381

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++            +E +Q+S  +  EA   E
Sbjct: 229 MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQE 288

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLEP +   T NP PW++
Sbjct: 289 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 342


>gi|113200701|ref|YP_717864.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
 gi|76574600|gb|ABA47165.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
          Length = 387

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK-IENPHLW--TKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDE+ HL    +++N+ +  ++P +    KE +     M       E 
Sbjct: 235 MEGSAKILSLIARDENQHLVITQNILNKWREGDDPEMAIIAKEEEVNVVDMFKRTVNEEK 294

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 114
            +A      G  +GLN      Y+++IANRR   IGL+P++      NP PW    ++ K
Sbjct: 295 RWADYLFKDGSMIGLNDRLLHNYVEWIANRRMKAIGLKPIYDIPAKNNPLPWTEHWLNSK 354

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G G+K D
Sbjct: 355 GQQNAPQETEIESYVVG-GIKQD 376


>gi|18656506|gb|AAL77807.1|AF389451_14 ribonucleoside-diphosphate reductase beta subunit [Tiger frog
           virus]
          Length = 387

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 10/138 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEF-----QQKSRTMLHEATLL 55
           M G+ +  ++ +RDE++H+     +   +  E P + TK+      +   R    E   +
Sbjct: 241 MKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDIIELFKEDAERVAELEEAFV 300

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDL 113
           ++A+  E  P     L     + Y+ ++ N R   +GL  L +      P PW+  +ID 
Sbjct: 301 DLAF-QECGP--VCELEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDG 357

Query: 114 KKEKNFFETRVTEYQQGA 131
               NFFE  VTEY+ G 
Sbjct: 358 ADLTNFFENHVTEYETGG 375


>gi|315930891|gb|EFV09876.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 305

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 48/97 (49%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF 97
                   +G      E+Y+ ++ ++R   I L+ L+
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLY 300


>gi|326783480|ref|YP_004324017.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
 gi|310004983|gb|ADO99373.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
          Length = 388

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQ-IKIENPH--LWTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES HL    +++ +  + ++P   L  +E Q     M       E 
Sbjct: 236 MEGSAKILSLIARDESQHLVITQNILRKWSEGDDPEMKLIAQEEQSYVTEMFKRTVEEEK 295

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 114
           A+A+     G  +GLN      Y+++IANRR   +G++P++      NP PW    ++ K
Sbjct: 296 AWANYLFRDGSLIGLNDRLLYNYVEWIANRRMKAVGIKPIYDIPAKNNPLPWTEHWLNSK 355

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G G+K D
Sbjct: 356 GQQNAPQETEIESYVVG-GIKQD 377


>gi|145634465|ref|ZP_01790175.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae PittAA]
 gi|229845068|ref|ZP_04465204.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 6P18H1]
 gi|229846892|ref|ZP_04466999.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 7P49H1]
 gi|145268445|gb|EDK08439.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae PittAA]
 gi|229810381|gb|EEP46100.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 7P49H1]
 gi|229812040|gb|EEP47733.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 6P18H1]
          Length = 376

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +      L      +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDLEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            A+A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KAWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWIN 337


>gi|170587050|ref|XP_001898292.1| ribonucleotide reductase 2 [Brugia malayi]
 gi|158594687|gb|EDP33271.1| ribonucleotide reductase 2, putative [Brugia malayi]
          Length = 288

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 2/91 (2%)

Query: 43  QKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN 102
           +K  +M +     +  Y  E +P   +G+N     QY++++A+    ++    ++ +++N
Sbjct: 186 KKFTSMFNACIDAKQEYLTEALPVDLIGINCKLMCQYIEYVADHLLTELHCAKIY-HSDN 244

Query: 103 PFPWMSEVIDLKKEKNFFETRVTEYQQGAGL 133
           PF +M E I ++ + NFFE RV+EYQ+   L
Sbjct: 245 PFDFM-ERISIEAKTNFFEKRVSEYQKAGVL 274


>gi|322832009|ref|YP_004212036.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
 gi|321167210|gb|ADW72909.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
          Length = 376

 Score = 50.4 bits (119), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL      +N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHALNLLRSGQDDPEMAEIALECQQECHDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  FK   NP PW++
Sbjct: 285 KDWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLDAPFKTRSNPIPWIN 337


>gi|170726650|ref|YP_001760676.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           woodyi ATCC 51908]
 gi|169811997|gb|ACA86581.1| Ribonucleoside-diphosphate reductase [Shewanella woodyi ATCC 51908]
          Length = 376

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +I   Q   ++P +    KE +Q++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHIIKLMQAGKDDPEMGEIAKECEQQAYDIFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY+++I N R   + L+  +    NP PWM
Sbjct: 285 KEWARYLFKDGSMIGLNEQILCQYVEYITNERMKSVNLDLPYAQITNPLPWM 336


>gi|161582009|ref|NP_230900.2| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|255745652|ref|ZP_05419600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholera CIRS 101]
 gi|262159072|ref|ZP_06030184.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae INDRE 91/1]
 gi|262169430|ref|ZP_06037122.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC27]
 gi|262191406|ref|ZP_06049594.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae CT 5369-93]
 gi|255736727|gb|EET92124.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholera CIRS 101]
 gi|262022243|gb|EEY40952.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC27]
 gi|262029257|gb|EEY47909.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae INDRE 91/1]
 gi|262032695|gb|EEY51245.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae CT 5369-93]
 gi|327483944|gb|AEA78351.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio cholerae LMA3894-4]
          Length = 377

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++            +E +Q+S  +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLEP +   T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWIN 338


>gi|37526941|ref|NP_930285.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36786374|emb|CAE15427.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide
           reductase 1) (B2 protein) (R2 protein) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 376

 Score = 50.4 bits (119), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    KE +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQQCYDLFVQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A     +G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFSEGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWIN 337


>gi|304398198|ref|ZP_07380072.1| ribonucleotide reductase [Pantoea sp. aB]
 gi|304354064|gb|EFM18437.1| ribonucleotide reductase [Pantoea sp. aB]
          Length = 376

 Score = 50.1 bits (118), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++        KE   + R     +  +A L E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|94499220|ref|ZP_01305758.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
           RED65]
 gi|94428852|gb|EAT13824.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
           RED65]
          Length = 376

 Score = 50.1 bits (118), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 7/114 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI---KIENPHLW--TKEFQQKSRTMLHEATLL 55
           M G A+  + I RDE+LHL  G   + QI     ++P +     E +++   +  EA   
Sbjct: 225 MEGNAKIIKLIARDEALHLT-GTQHMMQIWALGKDDPEMGEIANECKKQVIEIFREAAQQ 283

Query: 56  EIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
           E  +A      G  +GLN     QY+++I N+R   IGL+ +F+  +NP PW++
Sbjct: 284 EKDWAEYLFKDGSMIGLNKDILCQYVEYITNQRLGAIGLDNIFETRQNPIPWIN 337


>gi|308187586|ref|YP_003931717.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
           C9-1]
 gi|308058096|gb|ADO10268.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
           C9-1]
          Length = 376

 Score = 50.1 bits (118), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++        KE   + R     +  +A L E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|163803511|ref|ZP_02197381.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
 gi|159172687|gb|EDP57538.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
          Length = 377

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDESLHLN    +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDESLHLNGTQHMINLLRNGQDDFIFMQIAEEVKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPKAYPEATTNPIPWIN 338


>gi|330433426|gb|AEC18485.1| ribonucleotide-diphosphate reductase subunit beta [Gallibacterium
           anatis UMN179]
          Length = 376

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E QQ++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECQQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A+     G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 285 KEWANYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFTTRSNPIPWIN 337


>gi|215275538|sp|P0C8I0|RIR2_ASFK5 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---I 57
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L    I
Sbjct: 184 MPGLVSYNEFISRDEGMHCSFACFLISNYLNNIPE------EKIIHKILKEAVELVDEFI 237

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
           +YA +       G +     QY+++  +  C  +  + ++K  ENPFP M++    + EK
Sbjct: 238 SYAFDKARGSVPGFSKEMLFQYIRYFTDNLCFMLQCKSIYK-VENPFPQMTKFFLNEVEK 296

Query: 118 -NFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 297 TNFFELRPTQYQ 308


>gi|325919223|ref|ZP_08181270.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325923021|ref|ZP_08184721.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325546491|gb|EGD17645.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325550297|gb|EGD21104.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
          Length = 347

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   +           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|21233407|ref|NP_639324.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|21115247|gb|AAM43206.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
          Length = 347

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   +           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|115691069|ref|XP_001203692.1| PREDICTED: similar to ribonuleotide reductase small subunit,
           partial [Strongylocentrotus purpuratus]
 gi|115735426|ref|XP_798682.2| PREDICTED: similar to ribonuleotide reductase small subunit,
           partial [Strongylocentrotus purpuratus]
          Length = 258

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 31/127 (24%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + +    P         + + ++ +A  LE  Y  E
Sbjct: 155 GLTFSNELISRDEGLHCDFACLLFSHLNHPTP-------VSRIQEIIRDAVRLEEEYLSE 207

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +G+NA    QY+QF+A+R   ++                        + NFFE 
Sbjct: 208 ALPVALIGMNARLMCQYIQFVADRLLMEL------------------------KSNFFEK 243

Query: 123 RVTEYQQ 129
           RV EYQ+
Sbjct: 244 RVGEYQK 250


>gi|66770372|ref|YP_245134.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|188993572|ref|YP_001905582.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. B100]
 gi|66575704|gb|AAY51114.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|167735332|emb|CAP53546.1| Ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris]
          Length = 347

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   +           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|70937204|ref|XP_739440.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56516443|emb|CAH87750.1| hypothetical protein PC302623.00.0 [Plasmodium chabaudi chabaudi]
          Length = 72

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 2/55 (3%)

Query: 77  EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 131
            QY++F+A+R    +G   +F +++NPF WM ++I L+ + NFFE RV +YQ+  
Sbjct: 4   SQYIEFVADRLLECLGCSKVF-HSKNPFSWM-DLISLQGKTNFFEKRVADYQKSG 56


>gi|120598753|ref|YP_963327.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           W3-18-1]
 gi|146293170|ref|YP_001183594.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           putrefaciens CN-32]
 gi|120558846|gb|ABM24773.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. W3-18-1]
 gi|145564860|gb|ABP75795.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella putrefaciens CN-32]
 gi|319426318|gb|ADV54392.1| ribonucleotide reductase [Shewanella putrefaciens 200]
          Length = 376

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++N  Q   ++P +     + QQ++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILNIMQGGKDDPEMGEIAAQCQQEAYDLFLKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY++FI N+R   + L   +  + NP PWM
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEFITNQRMKSVNLPQPYPESTNPLPWM 336


>gi|262402402|ref|ZP_06078963.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC586]
 gi|262351184|gb|EEZ00317.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC586]
          Length = 360

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++            +E +Q+S  +  EA   E
Sbjct: 208 MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLEP +   T NP PW++
Sbjct: 268 KEWAAYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWIN 321


>gi|325914792|ref|ZP_08177129.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538985|gb|EGD10644.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 349

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   +           A  LE  + 
Sbjct: 209 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWT 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 269 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 328 DFFEMRNASYKK 339


>gi|238021387|ref|ZP_04601813.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147]
 gi|237868367|gb|EEP69373.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147]
          Length = 384

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLWTK---EFQQKSRTMLHEATLL 55
           M G A+  + I RDE+LHL     ++N ++   E    W +   E Q +   +  +A   
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRGGAEGAE-WAEIAAELQNECFELFKKAAEQ 290

Query: 56  EIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
           E  +A      G  +GLN     QY+++I N R   +GL+P F K T+NP PW++
Sbjct: 291 EKEWAEYLFKDGSMIGLNKDILCQYVEYITNARMLAVGLQPAFEKATQNPIPWIN 345


>gi|168702485|ref|ZP_02734762.1| ribonucleotide-diphosphate reductase small chain [Gemmata
           obscuriglobus UQM 2246]
          Length = 70

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
            GL+      Y ++ A+RR   +G+ P+F  T+NPF +M ++ D+++  NFFE RV+ YQ
Sbjct: 2   AGLSCRDLRSYPEYAADRRLESLGIAPVFG-TKNPFGFM-DLQDVQELTNFFERRVSAYQ 59

Query: 129 QG 130
            G
Sbjct: 60  LG 61


>gi|330445621|ref|ZP_08309273.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489812|dbj|GAA03770.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 377

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLLRTGQDDPEMAEIAVECEQECFDIFKSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL P ++  T+NP PW++
Sbjct: 285 KDWADYLFKDGSMIGLNKQILCQYVEYITNLRMSAVGLRPAYEGATQNPIPWIN 338


>gi|326781924|ref|YP_004322326.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
 gi|310003114|gb|ADO97512.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
          Length = 397

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 6/120 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQ-IKIENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDE+ HL    +++N+  + ++P +    KE ++ +      A   E 
Sbjct: 245 MEGSAKIISLIARDENQHLAITQNILNKWAQGDDPEMKQIMKEEEEWTYKAFDNAVNEEK 304

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 114
            +A      G  +GLN    +QY++++ANRR   IGL+P +    + NP PW    I  K
Sbjct: 305 RWADYLFKDGSMIGLNDKLLQQYVEWVANRRLKAIGLKPQYDIAASANPLPWTQHWISSK 364


>gi|261211025|ref|ZP_05925315.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC341]
 gi|260840000|gb|EEX66600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC341]
          Length = 360

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++            +E +Q+S  +  EA   E
Sbjct: 208 MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLEP +   T NP PW++
Sbjct: 268 KEWAAYLFKDGSMIGLNRDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWIN 321


>gi|157375444|ref|YP_001474044.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           sediminis HAW-EB3]
 gi|157317818|gb|ABV36916.1| Ribonucleoside-diphosphate reductase [Shewanella sediminis HAW-EB3]
          Length = 376

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQI---KIENPHLW--TKEFQQKSRTMLHEATLLEI 57
           G A+  + I RDE+LHL+ G   I ++     ++P +    +E ++  R +  +    E 
Sbjct: 227 GNAKIIKLIARDEALHLS-GTQHILKLWANGNDDPEMVEVCQELREAGRQVFLDVVEQEK 285

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            +A      G  +GLNA   +QY+++I+N R   IG E  F    NP PW++
Sbjct: 286 EWADYLFKDGSMIGLNAEILKQYIEYISNNRMEAIGYEAPFAIKNNPLPWIN 337


>gi|323945045|gb|EGB41110.1| nrdB protein [Escherichia coli H120]
          Length = 178

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 27  MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 86

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 87  KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 139


>gi|297521777|ref|ZP_06940163.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           OP50]
          Length = 174

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 23  MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 82

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 83  KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 135


>gi|113970253|ref|YP_734046.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           MR-4]
 gi|114047558|ref|YP_738108.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           MR-7]
 gi|113884937|gb|ABI38989.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. MR-4]
 gi|113889000|gb|ABI43051.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. MR-7]
          Length = 376

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    I  I Q   ++P +     E QQ++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILTIMQAGKDDPEMGEIAAECQQEAYNLFLKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY+++I N+R   + L   +    NP PWM
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQSNPLPWM 336


>gi|297724673|ref|NP_001174700.1| Os06g0257450 [Oryza sativa Japonica Group]
 gi|255676900|dbj|BAH93428.1| Os06g0257450 [Oryza sativa Japonica Group]
          Length = 162

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 2/61 (3%)

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 130
           +N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ 
Sbjct: 83  MNGDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKA 140

Query: 131 A 131
           +
Sbjct: 141 S 141


>gi|261867684|ref|YP_003255606.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413016|gb|ACX82387.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 376

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KDWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|294625675|ref|ZP_06704297.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|294664800|ref|ZP_06730124.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292600044|gb|EFF44159.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292605431|gb|EFF48758.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 347

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   +           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|15616797|ref|NP_240009.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219681552|ref|YP_002467937.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|219682108|ref|YP_002468492.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|257471235|ref|ZP_05635234.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. LSR1 (Acyrthosiphon pisum)]
 gi|11134533|sp|P57275|RIR2_BUCAI RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|25285834|pir||G84950 ribonucleoside-diphosphate reductase (EC 1.17.4.1) nrdB [imported]
           - Buchnera sp. (strain APS)
 gi|10038860|dbj|BAB12895.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219621841|gb|ACL29997.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|219624395|gb|ACL30550.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|311087074|gb|ADP67154.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. JF99 (Acyrthosiphon pisum)]
          Length = 376

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +      EN      E ++++  +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 109
             +A      G  +GLN     QY+++I N R H IG +  FK   NP PW+++
Sbjct: 285 KKWASYLFKSGSMLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWIND 338


>gi|311085920|gb|ADP66002.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. LL01 (Acyrthosiphon pisum)]
 gi|311086491|gb|ADP66572.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. TLW03 (Acyrthosiphon pisum)]
 gi|311087626|gb|ADP67705.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. JF98 (Acyrthosiphon pisum)]
          Length = 359

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +      EN      E ++++  +   A   E
Sbjct: 208 MEGNAKIIRLIARDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 109
             +A      G  +GLN     QY+++I N R H IG +  FK   NP PW+++
Sbjct: 268 KKWASYLFKSGSMLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWIND 321


>gi|293392273|ref|ZP_06636607.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952807|gb|EFE02926.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 376

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAKIAEECKQEAYDLFLAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KDWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|90409249|ref|ZP_01217354.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp.
           CNPT3]
 gi|90309647|gb|EAS37827.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp.
           CNPT3]
          Length = 381

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 5/111 (4%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLEIA 58
           G A+  + I RDE+LHLN    ++N      ++P +     E   K R +   A   E  
Sbjct: 232 GNAKIIKLIARDEALHLNSTQQILNIWADGKDDPEMAEIAIECHAKGRDIFLTAAAQEKE 291

Query: 59  YAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
           +A      G  +GLN     QY+++I+N R   IG E  F+   NP PW++
Sbjct: 292 WAAYLFKDGSMIGLNEVILCQYVEYISNVRMQAIGYEAPFEIKNNPIPWIN 342


>gi|331035505|gb|AEC53062.1| ribonucleotide reductase subunit B [Synechococcus phage S-CRM01]
          Length = 381

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 7/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK---SRTMLHEATLLEI 57
           M G A+    I RDE+ HL    ++IN  +  +     K + ++   + ++   A   E 
Sbjct: 229 MEGSAKIISLIARDENQHLFLTQNIINNWRNNDDPEMKKIYNEEIDHTTSLFEAAVDQEK 288

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 114
           A+A      G  +GL+      Y+++IANRR   IG++P+++     NP PWM   +  K
Sbjct: 289 AWAQYLFKTGSMIGLSEKLLCNYVEWIANRRMKAIGIKPIYEIPANSNPLPWMDHWLKSK 348

Query: 115 KEKNFF-ETRVTEYQQGA 131
             +N   ET +  Y  G 
Sbjct: 349 GVQNAPQETEIESYIVGG 366


>gi|170767354|ref|ZP_02901807.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
 gi|170123688|gb|EDS92619.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
          Length = 376

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|56460472|ref|YP_155753.1| ribonucleotide-diphosphate reductase subunit beta [Idiomarina
           loihiensis L2TR]
 gi|56179482|gb|AAV82204.1| Ribonucleotide reductase, beta subunit [Idiomarina loihiensis L2TR]
          Length = 377

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 6/117 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE++HL     ++N  Q   ++P +    +E +  +  +   A   E
Sbjct: 225 MEGNAKIIKLIARDENVHLTSTQHILNLWQYGEDDPEMKEIAEELRDDAYEIFMTAVKQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVI 111
             +AH     G  +GLN     QY+++IAN R   IG + P      NP PWM++ +
Sbjct: 285 KQWAHYLFKDGSMIGLNESMLCQYVEYIANLRMQAIGFDAPFENQRSNPLPWMNKYL 341


>gi|332093862|gb|EGI98916.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           boydii 5216-82]
          Length = 376

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|329119976|ref|ZP_08248648.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327463889|gb|EGF10203.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 384

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+P F  + +NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKDILCQYVEYITNHRMIAVGLDPAFPASNQNPIPWIN 345


>gi|310830452|ref|YP_003965553.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
 gi|309249919|gb|ADO59485.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
          Length = 342

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 1/112 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  ++   YI RDE+ H  F  ++  Q+ I+ P L T++ +      + EA   E  +A
Sbjct: 202 MLATSQMISYIQRDENQHCYFFAELYKQLLIDFPQLNTEQNKTFVYNFMDEAVRHETEWA 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
            E +  G  G++      Y++ IAN R   +GL   ++   N  PW+    D
Sbjct: 262 -EYVLDGIEGIDLDEFRGYIRHIANNRLRLMGLPAAYEGVSNTMPWIRPFSD 312


>gi|251792451|ref|YP_003007177.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter
           aphrophilus NJ8700]
 gi|315634378|ref|ZP_07889665.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter
           segnis ATCC 33393]
 gi|247533844|gb|ACS97090.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           aphrophilus NJ8700]
 gi|315476968|gb|EFU67713.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter
           segnis ATCC 33393]
          Length = 376

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KDWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|218690398|ref|YP_002398610.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ED1a]
 gi|218427962|emb|CAR08882.2| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli ED1a]
          Length = 376

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|15802782|ref|NP_288809.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 EDL933]
 gi|15832372|ref|NP_311145.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. Sakai]
 gi|16130170|ref|NP_416738.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|82544520|ref|YP_408467.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           Sb227]
 gi|82777644|ref|YP_403993.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae Sd197]
 gi|89109052|ref|AP_002832.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli str. K-12 substr. W3110]
 gi|157161718|ref|YP_001459036.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           HS]
 gi|170081853|ref|YP_001731173.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187731010|ref|YP_001881065.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           CDC 3083-94]
 gi|188495860|ref|ZP_03003130.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|195935609|ref|ZP_03080991.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC4024]
 gi|218548311|ref|YP_002382102.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ATCC 35469]
 gi|218705765|ref|YP_002413284.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UMN026]
 gi|238901409|ref|YP_002927205.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|254794126|ref|YP_003078963.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. TW14359]
 gi|256022083|ref|ZP_05435948.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           4_1_40B]
 gi|261223312|ref|ZP_05937593.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259138|ref|ZP_05951671.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. FRIK966]
 gi|293405702|ref|ZP_06649694.1| nrdB [Escherichia coli FVEC1412]
 gi|293410599|ref|ZP_06654175.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|298381383|ref|ZP_06990982.1| nrdB [Escherichia coli FVEC1302]
 gi|309785072|ref|ZP_07679705.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella
           dysenteriae 1617]
 gi|312973510|ref|ZP_07787682.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1827-70]
 gi|57014104|sp|P69924|RIR2_ECOLI RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|57014105|sp|P69925|RIR2_ECO57 RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|12516573|gb|AAG57364.1|AE005456_1 ribonucleoside diphosphage reductase 1, beta subunit, B2
           [Escherichia coli O157:H7 str. EDL933]
 gi|146967|gb|AAA24224.1| ribonucleoside diphosphate reductase B2 subunit precursor
           [Escherichia coli]
 gi|1788567|gb|AAC75295.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|1799582|dbj|BAA16054.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli str. K12 substr. W3110]
 gi|13362587|dbj|BAB36541.1| ribonucleoside-diphosphate reductase 1 beta subunit [Escherichia
           coli O157:H7 str. Sakai]
 gi|81241792|gb|ABB62502.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           dysenteriae Sd197]
 gi|81245931|gb|ABB66639.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           boydii Sb227]
 gi|157067398|gb|ABV06653.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli HS]
 gi|169889688|gb|ACB03395.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187428002|gb|ACD07276.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella boydii
           CDC 3083-94]
 gi|188491059|gb|EDU66162.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|218355852|emb|CAQ88465.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia fergusonii ATCC 35469]
 gi|218432862|emb|CAR13756.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli UMN026]
 gi|238863475|gb|ACR65473.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|254593526|gb|ACT72887.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|284922226|emb|CBG35308.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           042]
 gi|291427910|gb|EFF00937.1| nrdB [Escherichia coli FVEC1412]
 gi|291471067|gb|EFF13551.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|298278825|gb|EFI20339.1| nrdB [Escherichia coli FVEC1302]
 gi|308927442|gb|EFP72916.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella
           dysenteriae 1617]
 gi|309702545|emb|CBJ01872.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           ETEC H10407]
 gi|310332105|gb|EFP99340.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1827-70]
 gi|315615496|gb|EFU96128.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 3431]
 gi|320184866|gb|EFW59654.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri CDC 796-83]
 gi|320663001|gb|EFX30318.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|327252504|gb|EGE64163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli STEC_7v]
 gi|332094036|gb|EGI99088.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           boydii 3594-74]
          Length = 376

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|312967536|ref|ZP_07781751.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 2362-75]
 gi|312287733|gb|EFR15638.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 2362-75]
          Length = 359

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 208 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 268 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 320


>gi|40889712|pdb|1RSR|A Chain A, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
           Ribonucleotide Reductase
 gi|40889713|pdb|1RSR|B Chain B, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
           Ribonucleotide Reductase
          Length = 375

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|26248623|ref|NP_754663.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           CFT073]
 gi|74312755|ref|YP_311174.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sonnei
           Ss046]
 gi|91211528|ref|YP_541514.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UTI89]
 gi|110642443|ref|YP_670173.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           536]
 gi|157157492|ref|YP_001463584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           E24377A]
 gi|161485800|ref|NP_708125.3| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 301]
 gi|161486465|ref|NP_837840.2| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|191166513|ref|ZP_03028343.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|191170278|ref|ZP_03031832.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|194433322|ref|ZP_03065602.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|209919687|ref|YP_002293771.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SE11]
 gi|215487452|ref|YP_002329883.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218554798|ref|YP_002387711.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI1]
 gi|218559152|ref|YP_002392065.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           S88]
 gi|218695841|ref|YP_002403508.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           55989]
 gi|218700706|ref|YP_002408335.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI39]
 gi|227887293|ref|ZP_04005098.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 83972]
 gi|253772842|ref|YP_003035673.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162246|ref|YP_003045354.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           B str. REL606]
 gi|256017603|ref|ZP_05431468.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
 gi|260844831|ref|YP_003222609.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|260856285|ref|YP_003230176.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|260868965|ref|YP_003235367.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|293446578|ref|ZP_06663000.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|300818165|ref|ZP_07098377.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
 gi|300822109|ref|ZP_07102251.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 119-7]
 gi|300981251|ref|ZP_07175428.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|300983269|ref|ZP_07176508.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|301048988|ref|ZP_07195975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|306814652|ref|ZP_07448814.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|307311198|ref|ZP_07590842.1| ribonucleotide reductase [Escherichia coli W]
 gi|309793115|ref|ZP_07687543.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|331647890|ref|ZP_08348982.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
 gi|331668939|ref|ZP_08369787.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331678186|ref|ZP_08378861.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|26109028|gb|AAN81231.1|AE016763_190 Ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           CFT073]
 gi|73856232|gb|AAZ88939.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           sonnei Ss046]
 gi|91073102|gb|ABE07983.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           UTI89]
 gi|110344035|gb|ABG70272.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           536]
 gi|157079522|gb|ABV19230.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E24377A]
 gi|190903473|gb|EDV63192.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|190909794|gb|EDV69379.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|194418416|gb|EDX34505.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|209912946|dbj|BAG78020.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli
           SE11]
 gi|215265524|emb|CAS09927.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218352573|emb|CAU98352.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli 55989]
 gi|218361566|emb|CAQ99157.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli IAI1]
 gi|218365921|emb|CAR03663.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli S88]
 gi|218370692|emb|CAR18503.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli IAI39]
 gi|222033996|emb|CAP76737.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli LF82]
 gi|227835643|gb|EEJ46109.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 83972]
 gi|242377869|emb|CAQ32637.1| nrdB, subunit of B2 protein and GDP reductase [multifunctional]
           [Escherichia coli BL21(DE3)]
 gi|253323886|gb|ACT28488.1| ribonucleotide reductase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974147|gb|ACT39818.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           B str. REL606]
 gi|253978314|gb|ACT43984.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           BL21(DE3)]
 gi|257754934|dbj|BAI26436.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|257759978|dbj|BAI31475.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|257765321|dbj|BAI36816.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|281179326|dbj|BAI55656.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli
           SE15]
 gi|291323408|gb|EFE62836.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|294490302|gb|ADE89058.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli IHE3034]
 gi|300299180|gb|EFJ55565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|300307615|gb|EFJ62135.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|300408603|gb|EFJ92141.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|300525239|gb|EFK46308.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 119-7]
 gi|300529309|gb|EFK50371.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
 gi|305852046|gb|EFM52498.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|306908704|gb|EFN39201.1| ribonucleotide reductase [Escherichia coli W]
 gi|307554301|gb|ADN47076.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli ABU 83972]
 gi|308123401|gb|EFO60663.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|312946856|gb|ADR27683.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|313651060|gb|EFS15459.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|315061535|gb|ADT75862.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli W]
 gi|315292180|gb|EFU51532.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 153-1]
 gi|320178793|gb|EFW53756.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           ATCC 9905]
 gi|320196104|gb|EFW70728.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           WV_060327]
 gi|320199830|gb|EFW74419.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           EC4100B]
 gi|323156512|gb|EFZ42666.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli EPECa14]
 gi|323161696|gb|EFZ47579.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli E128010]
 gi|323168602|gb|EFZ54282.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           sonnei 53G]
 gi|323171914|gb|EFZ57558.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli LT-68]
 gi|323176838|gb|EFZ62428.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1180]
 gi|323184146|gb|EFZ69523.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1357]
 gi|323188037|gb|EFZ73332.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli RN587/1]
 gi|323377884|gb|ADX50152.1| Ribonucleoside-diphosphate reductase [Escherichia coli KO11]
 gi|324006608|gb|EGB75827.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 57-2]
 gi|324013118|gb|EGB82337.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 60-1]
 gi|324117882|gb|EGC11781.1| ribonucleotide reductase [Escherichia coli E1167]
 gi|325496725|gb|EGC94584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ECD227]
 gi|330912066|gb|EGH40576.1| ribonucleotide reductase of class 1a (aerobic), beta subunit
           [Escherichia coli AA86]
 gi|331043614|gb|EGI15752.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
 gi|331064133|gb|EGI36044.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331074646|gb|EGI45966.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|332096162|gb|EGJ01165.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           dysenteriae 155-74]
          Length = 376

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|61680624|pdb|1YFD|A Chain A, Crystal Structure Of The Y122h Mutant Of Ribonucleotide
           Reductase R2 Protein From E. Coli
 gi|61680625|pdb|1YFD|B Chain B, Crystal Structure Of The Y122h Mutant Of Ribonucleotide
           Reductase R2 Protein From E. Coli
          Length = 375

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|1942079|pdb|1XIK|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|1942080|pdb|1XIK|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|15825694|pdb|1JPR|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Nitric Oxide
 gi|15825695|pdb|1JPR|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Nitric Oxide
 gi|15826771|pdb|1JQC|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Hydrogen Peroxide And Hydroxylamine
 gi|15826772|pdb|1JQC|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Hydrogen Peroxide And Hydroxylamine
 gi|29726528|pdb|1MXR|A Chain A, High Resolution Structure Of Ribonucleotide Reductase R2
           From E. Coli In Its Oxidised (Met) Form
 gi|29726529|pdb|1MXR|B Chain B, High Resolution Structure Of Ribonucleotide Reductase R2
           From E. Coli In Its Oxidised (Met) Form
          Length = 375

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|320175005|gb|EFW50120.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae CDC 74-1112]
          Length = 376

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|289670858|ref|ZP_06491933.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 349

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   +           A  LE  + 
Sbjct: 209 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWT 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 269 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 328 DFFEMRNASYKK 339


>gi|304445703|pdb|2XOF|A Chain A, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of
           E. Coli
 gi|304445704|pdb|2XOF|B Chain B, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of
           E. Coli
          Length = 375

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|331653669|ref|ZP_08354670.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
 gi|331048518|gb|EGI20594.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
          Length = 449

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 298 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 357

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 358 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 410


>gi|307107666|gb|EFN55908.1| hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis]
          Length = 849

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 7/100 (7%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE +H       +    +    L +K    +++ ++ EA   E A+    +P    G
Sbjct: 754 ISRDEGVH-------VESAGVMYSLLRSKLTDSQAQGIVGEAVEAERAFVCGQLPLEATG 806

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV 110
           L A + E+Y+Q++ +R    +G  PL++   NP PW+  +
Sbjct: 807 LEAGAMEEYLQYVGDRLLGALGHAPLYRVAANPLPWLEGI 846


>gi|153835812|ref|ZP_01988479.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi
           HY01]
 gi|148867435|gb|EDL66832.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi
           HY01]
          Length = 377

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWIN 338


>gi|110806205|ref|YP_689725.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 5 str. 8401]
 gi|110615753|gb|ABF04420.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 5 str. 8401]
 gi|281601680|gb|ADA74664.1| putative ribonucleotide reductase, beta subunit [Shigella flexneri
           2002017]
          Length = 453

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 302 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 361

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 362 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 414


>gi|331642864|ref|ZP_08343999.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
 gi|331039662|gb|EGI11882.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
          Length = 449

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 298 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 357

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 358 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 410


>gi|3891570|pdb|2AV8|A Chain A, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
           Coli
 gi|3891571|pdb|2AV8|B Chain B, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
           Coli
          Length = 340

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|332100965|gb|EGJ04311.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
          Length = 420

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 269 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 328

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 329 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381


>gi|3891582|pdb|1AV8|A Chain A, Ribonucleotide Reductase R2 Subunit From E. Coli
 gi|3891583|pdb|1AV8|B Chain B, Ribonucleotide Reductase R2 Subunit From E. Coli
          Length = 340

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|194427189|ref|ZP_03059740.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194436109|ref|ZP_03068211.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|300918603|ref|ZP_07135191.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300931418|ref|ZP_07146747.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|301303305|ref|ZP_07209430.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|194414810|gb|EDX31081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194424837|gb|EDX40822.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|300414255|gb|EFJ97565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300460788|gb|EFK24281.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|300841479|gb|EFK69239.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|323961541|gb|EGB57149.1| ribonucleotide reductase [Escherichia coli H489]
 gi|323973062|gb|EGB68256.1| ribonucleotide reductase [Escherichia coli TA007]
          Length = 393

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 242 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 301

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 302 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354


>gi|189403970|ref|ZP_02786340.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|217327202|ref|ZP_03443285.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|301026864|ref|ZP_07190263.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|301647674|ref|ZP_07247468.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|189368305|gb|EDU86721.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|217319569|gb|EEC27994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|260448673|gb|ACX39095.1| Ribonucleoside-diphosphate reductase [Escherichia coli DH1]
 gi|299879524|gb|EFI87735.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|301074204|gb|EFK89010.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|326339582|gb|EGD63393.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1125]
          Length = 393

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 242 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 301

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 302 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354


>gi|1941986|pdb|1PFR|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|1941987|pdb|1PFR|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
          Length = 340

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|326536452|ref|YP_004300883.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit
           [Aeromonas phage 65]
 gi|312262798|gb|ADQ53054.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit
           [Aeromonas phage 65]
          Length = 376

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 5/114 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     +I+  Q   ++P +    K  + K+ ++  E    E
Sbjct: 225 MEGSAKIMKFIARDENLHLKATQTIISRWQTGKDDPEMVEIAKRLEGKAVSIFEEVVAQE 284

Query: 57  IAYAHETM-PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 109
             +A   M  K   GLN      Y++++A+ R    GL   +   +NP PW+++
Sbjct: 285 KEWAEYLMGDKSLNGLNRDVLCNYIEYLADNRMRSAGLPSSYAKRKNPLPWVTK 338


>gi|288549884|ref|ZP_06390831.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317051|gb|EFC55989.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
          Length = 420

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 269 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGTDDPEMAAIAEECKQECYDLFVQAAQQE 328

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 329 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381


>gi|300936793|ref|ZP_07151685.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
 gi|300458078|gb|EFK21571.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
          Length = 405

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 254 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 313

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 314 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 366


>gi|170682190|ref|YP_001744431.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SMS-3-5]
 gi|170519908|gb|ACB18086.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli SMS-3-5]
 gi|315285847|gb|EFU45287.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 110-3]
 gi|315298059|gb|EFU57328.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 16-3]
          Length = 393

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 242 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 301

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 302 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354


>gi|117624429|ref|YP_853342.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           APEC O1]
 gi|237704711|ref|ZP_04535192.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|115513553|gb|ABJ01628.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           APEC O1]
 gi|226901077|gb|EEH87336.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|323952030|gb|EGB47904.1| ribonucleotide reductase [Escherichia coli H252]
 gi|323956004|gb|EGB51757.1| ribonucleotide reductase [Escherichia coli H263]
          Length = 420

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 269 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 328

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 329 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381


>gi|83754022|pdb|2ALX|A Chain A, Ribonucleotide Reductase R2 From Escherichia Coli In Space
           Group P6(1)22
          Length = 340

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|300897697|ref|ZP_07116095.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|301022393|ref|ZP_07186277.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|331683911|ref|ZP_08384507.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
 gi|300358575|gb|EFJ74445.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|300397543|gb|EFJ81081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|323967677|gb|EGB63089.1| ribonucleotide reductase [Escherichia coli M863]
 gi|331078863|gb|EGI50065.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
          Length = 393

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 242 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 301

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 302 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354


>gi|293395206|ref|ZP_06639492.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582]
 gi|291422383|gb|EFE95626.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582]
          Length = 376

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   FK   NP PW++
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYVEYITNIRMQAVGLGAPFKTRSNPIPWIN 337


>gi|331663742|ref|ZP_08364652.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
 gi|323977567|gb|EGB72653.1| ribonucleotide reductase [Escherichia coli TW10509]
 gi|331059541|gb|EGI31518.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
          Length = 389

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 238 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 297

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 298 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350


>gi|291283479|ref|YP_003500297.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2
           [Escherichia coli O55:H7 str. CB9615]
 gi|290763352|gb|ADD57313.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2
           [Escherichia coli O55:H7 str. CB9615]
          Length = 389

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 238 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 297

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 298 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350


>gi|161617990|ref|YP_001595470.1| ribonucleotide reductase beta subunit [Enterobacteria phage
           phiEcoM-GJ1]
 gi|150416409|gb|ABR68787.1| ribonucleotide reductase beta subunit [Enterobacteria phage
           phiEcoM-GJ1]
          Length = 372

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +     E +Q+ + +  +A   E
Sbjct: 221 MEGNAKIIRLIARDEALHLTGTQHMLNLLASGKDDPEMGEIAAECRQECQKLFEDAAQQE 280

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN      Y+++I N R   +GL+  FK   NP PW++
Sbjct: 281 KDWADYLFKDGSMIGLNKQILCGYVEYITNIRMQAVGLDAPFKGATNPIPWIN 333


>gi|331658316|ref|ZP_08359278.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
 gi|307626227|gb|ADN70531.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UM146]
 gi|331056564|gb|EGI28573.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
          Length = 389

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 238 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 297

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 298 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350


>gi|54309624|ref|YP_130644.1| ribonucleotide-diphosphate reductase subunit beta [Photobacterium
           profundum SS9]
 gi|46914062|emb|CAG20842.1| putative ribonucleoside-diphosphate reductase,beta subunit
           [Photobacterium profundum SS9]
          Length = 377

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLE  +    +NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKEILCQYVEYITNLRMKAVGLEQAYPGANQNPIPWIN 338


>gi|113461104|ref|YP_719172.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           somnus 129PT]
 gi|170717681|ref|YP_001784756.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           somnus 2336]
 gi|112823147|gb|ABI25236.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Haemophilus somnus 129PT]
 gi|168825810|gb|ACA31181.1| Ribonucleoside-diphosphate reductase [Haemophilus somnus 2336]
          Length = 376

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYELFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|170019452|ref|YP_001724406.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ATCC 8739]
 gi|187775748|ref|ZP_02798054.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|188024880|ref|ZP_02774660.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|189010171|ref|ZP_02805091.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|189402101|ref|ZP_02779989.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|189403050|ref|ZP_02792862.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|189404930|ref|ZP_02812148.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|189405663|ref|ZP_02823406.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|208806716|ref|ZP_03249053.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208812585|ref|ZP_03253914.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208820390|ref|ZP_03260710.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209398142|ref|YP_002271641.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|293415528|ref|ZP_06658171.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
 gi|300948933|ref|ZP_07162994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|300958921|ref|ZP_07171024.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|307138893|ref|ZP_07498249.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           H736]
 gi|169754380|gb|ACA77079.1| Ribonucleoside-diphosphate reductase [Escherichia coli ATCC 8739]
 gi|187771218|gb|EDU35062.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|188016038|gb|EDU54160.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|189002108|gb|EDU71094.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|189357709|gb|EDU76128.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|189362845|gb|EDU81264.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|189372811|gb|EDU91227.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|189378868|gb|EDU97284.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|208726517|gb|EDZ76118.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208733862|gb|EDZ82549.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208740513|gb|EDZ88195.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209159542|gb|ACI36975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|291433176|gb|EFF06155.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
 gi|300314424|gb|EFJ64208.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|300451587|gb|EFK15207.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|315136867|dbj|BAJ44026.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           DH1]
 gi|320192144|gb|EFW66789.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC1212]
 gi|320641061|gb|EFX10540.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. G5101]
 gi|320646450|gb|EFX15369.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. 493-89]
 gi|320651547|gb|EFX19927.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. H 2687]
 gi|320657299|gb|EFX25101.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320667818|gb|EFX34726.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323936632|gb|EGB32918.1| ribonucleotide reductase [Escherichia coli E1520]
 gi|323941071|gb|EGB37258.1| ribonucleotide reductase [Escherichia coli E482]
 gi|326344044|gb|EGD67805.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1044]
          Length = 389

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 238 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 297

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 298 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350


>gi|156975012|ref|YP_001445919.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio harveyi
           ATCC BAA-1116]
 gi|156526606|gb|ABU71692.1| hypothetical protein VIBHAR_02734 [Vibrio harveyi ATCC BAA-1116]
          Length = 377

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLW---TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++  ++  L+    +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFLFMQIAEEEKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWIN 338


>gi|324112772|gb|EGC06748.1| ribonucleotide reductase [Escherichia fergusonii B253]
          Length = 389

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 238 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 297

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 298 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350


>gi|193068232|ref|ZP_03049196.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|300903617|ref|ZP_07121535.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300926340|ref|ZP_07142140.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|301328725|ref|ZP_07221778.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|30041924|gb|AAP17650.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 2a str. 2457T]
 gi|56383622|gb|AAN43832.2| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 2a str. 301]
 gi|192958511|gb|EDV88950.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|300404353|gb|EFJ87891.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300417617|gb|EFK00928.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|300844873|gb|EFK72633.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|315255170|gb|EFU35138.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 85-1]
          Length = 389

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 238 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 297

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 298 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 350


>gi|254230294|ref|ZP_04923683.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp.
           Ex25]
 gi|151937191|gb|EDN56060.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp.
           Ex25]
          Length = 242

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q    +  EA   E
Sbjct: 90  MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQE 149

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 150 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWIN 203


>gi|324020907|gb|EGB90126.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 117-3]
          Length = 420

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 269 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 328

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 329 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381


>gi|290473788|ref|YP_003466662.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
           bovienii SS-2004]
 gi|289173095|emb|CBJ79868.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
           bovienii SS-2004]
          Length = 376

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIARECEQQCYDLFVQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWIN 337


>gi|295098106|emb|CBK87196.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 420

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 269 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAAIAEECKQECYDLFVQAAQQE 328

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 329 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 381


>gi|213609160|ref|ZP_03368986.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 144

 Score = 48.9 bits (115), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 5/103 (4%)

Query: 11  IMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPK 66
           I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A      
Sbjct: 3   IARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLFRD 62

Query: 67  G-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
           G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 63  GSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 105


>gi|42543283|pdb|1PIY|A Chain A, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At
           Neutral Ph
 gi|42543284|pdb|1PIY|B Chain B, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At
           Neutral Ph
 gi|42543506|pdb|1R65|A Chain A, Crystal Structure Of Ferrous Soaked Ribonucleotide
           Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli
 gi|42543507|pdb|1R65|B Chain B, Crystal Structure Of Ferrous Soaked Ribonucleotide
           Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli
          Length = 375

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336


>gi|494379|pdb|1MRR|A Chain A, Substitution Of Manganese For Iron In Ribonucleotide
           Reductase From Escherichia Coli. Spectroscopic And
           Crystallographic Characterization
 gi|494380|pdb|1MRR|B Chain B, Substitution Of Manganese For Iron In Ribonucleotide
           Reductase From Escherichia Coli. Spectroscopic And
           Crystallographic Characterization
 gi|494553|pdb|1RIB|A Chain A, Structure And Function Of The Escherichia Coli
           Ribonucleotide Reductase Protein R2
 gi|494554|pdb|1RIB|B Chain B, Structure And Function Of The Escherichia Coli
           Ribonucleotide Reductase Protein R2
          Length = 375

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336


>gi|157879968|pdb|1RNR|A Chain A, Autocatalytic Generation Of Dopa In The Engineered Protein
           R2 F208y From Escherichia Coli Ribonucleotide Reductase
           And Crystal Structure Of The Dopa-208 Protein
 gi|157879969|pdb|1RNR|B Chain B, Autocatalytic Generation Of Dopa In The Engineered Protein
           R2 F208y From Escherichia Coli Ribonucleotide Reductase
           And Crystal Structure Of The Dopa-208 Protein
          Length = 375

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336


>gi|262274472|ref|ZP_06052283.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Grimontia hollisae CIP 101886]
 gi|262221035|gb|EEY72349.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Grimontia hollisae CIP 101886]
          Length = 360

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    KE +Q    +   A   E
Sbjct: 208 MEGNAKIIKLIARDEALHLTSTQHMLNILRSGDDDPEMAEIAKECEQVCFDLFKNAAEQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+P ++   +NP PW++
Sbjct: 268 KEWAEYLFKDGSMIGLNKDILCQYVEYITNLRMAAVGLKPAYQGANQNPIPWIN 321


>gi|71065825|ref|YP_264552.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           arcticus 273-4]
 gi|71038810|gb|AAZ19118.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter arcticus 273-4]
          Length = 377

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++I  ++P +    KE  ++S  +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F K   NP PW++
Sbjct: 285 KEWAGYLFKDGSMIGLNKDILCQYIEYITNLRMEAVGLPVAFPKSKSNPIPWIN 338


>gi|311278798|ref|YP_003941029.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
 gi|308747993|gb|ADO47745.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
          Length = 376

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|33358114|pdb|1PIM|A Chain A, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
           Subunit, D84e Mutant
 gi|33358115|pdb|1PIM|B Chain B, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
           Subunit, D84e Mutant
 gi|33358116|pdb|1PIU|A Chain A, Oxidized Ribonucleotide Reductase R2-D84e Mutant
           Containing Oxo-Bridged Diferric Cluster
 gi|33358117|pdb|1PIU|B Chain B, Oxidized Ribonucleotide Reductase R2-D84e Mutant
           Containing Oxo-Bridged Diferric Cluster
 gi|42543285|pdb|1PIZ|A Chain A, Ribonucleotide Reductase R2 D84e Mutant Soaked With
           Ferrous Ions At Neutral Ph
 gi|42543286|pdb|1PIZ|B Chain B, Ribonucleotide Reductase R2 D84e Mutant Soaked With
           Ferrous Ions At Neutral Ph
          Length = 375

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336


>gi|217973230|ref|YP_002357981.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS223]
 gi|304408853|ref|ZP_07390474.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183]
 gi|307302856|ref|ZP_07582611.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175]
 gi|217498365|gb|ACK46558.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS223]
 gi|304352674|gb|EFM17071.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183]
 gi|306913216|gb|EFN43638.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175]
 gi|315267707|gb|ADT94560.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS678]
          Length = 376

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    I  I Q   ++P +     E QQ++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY++FI N+R   + L   +    NP PWM
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWM 336


>gi|15602584|ref|NP_245656.1| ribonucleotide-diphosphate reductase subunit beta [Pasteurella
           multocida subsp. multocida str. Pm70]
 gi|12721013|gb|AAK02803.1| NrdB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 376

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|153000811|ref|YP_001366492.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS185]
 gi|160875520|ref|YP_001554836.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS195]
 gi|151365429|gb|ABS08429.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS185]
 gi|160861042|gb|ABX49576.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS195]
          Length = 386

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    I  I Q   ++P +     E QQ++  +  +A   E
Sbjct: 235 MEGNAKIIRLIARDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQE 294

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY++FI N+R   + L   +    NP PWM
Sbjct: 295 KEWAKYLFKDGSMIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWM 346


>gi|42543287|pdb|1PJ0|A Chain A, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH
           Ferrous Ions At Neutral Ph
 gi|42543288|pdb|1PJ0|B Chain B, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH
           Ferrous Ions At Neutral Ph
 gi|42543289|pdb|1PJ1|A Chain A, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS
           Ions At Ph 5
 gi|42543290|pdb|1PJ1|B Chain B, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS
           Ions At Ph 5
          Length = 375

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336


>gi|260913913|ref|ZP_05920387.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC
           43325]
 gi|260632000|gb|EEX50177.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC
           43325]
          Length = 376

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWASYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWIN 337


>gi|42543295|pdb|1PM2|A Chain A, Crystal Structure Of Manganese Substituted R2-D84e (D84e
           Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
           Reductase)
 gi|42543296|pdb|1PM2|B Chain B, Crystal Structure Of Manganese Substituted R2-D84e (D84e
           Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
           Reductase)
          Length = 339

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWIN 336


>gi|212635281|ref|YP_002311806.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           piezotolerans WP3]
 gi|212556765|gb|ACJ29219.1| Ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           piezotolerans WP3]
          Length = 376

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++  +    ++P +    KE +Q +  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY+++I N R   + LE  +    NP PWM
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEYITNERMKAVNLESPYAEQSNPLPWM 336


>gi|149911236|ref|ZP_01899859.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
           PE36]
 gi|149805690|gb|EDM65689.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
           PE36]
          Length = 376

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +   + E  Q+++ +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHILNLMADGKDDPEMQEISIECFQETQKIFTDAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN      Y+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSDYIEYITNTRMAAVGLPKAFEVKSNPLPWIN 337


>gi|255928974|ref|YP_003097286.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4]
 gi|255705260|emb|CAR63249.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4]
          Length = 394

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 6/110 (5%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIK-IENPHL--WTKEFQQKSRTMLHEATLLEIAY 59
           G A+    I RDES H+    +++N+ K  ++P +    KE ++    M  +    E  +
Sbjct: 244 GSAKIIGLIARDESQHMTITQNILNKWKEGDDPEMVQIAKEEEENVYDMFRQCVEEEKLW 303

Query: 60  AHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPW 106
           A      G  +GLN     +Y+++ ANRR   IGL+ +F    + NP PW
Sbjct: 304 AEYLFKDGSIIGLNDKLLSKYVEWTANRRLKSIGLKAIFDTPVSNNPLPW 353


>gi|91227184|ref|ZP_01261643.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 12G01]
 gi|262393879|ref|YP_003285733.1| ribonucleotide reductase of class Ia (aerobic) subunit beta [Vibrio
           sp. Ex25]
 gi|269967067|ref|ZP_06181135.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 40B]
 gi|91188712|gb|EAS75000.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 12G01]
 gi|262337473|gb|ACY51268.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. Ex25]
 gi|269828326|gb|EEZ82592.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 40B]
          Length = 377

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q    +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWIN 338


>gi|301156451|emb|CBW15922.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Haemophilus parainfluenzae T3T1]
          Length = 376

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 285 KEWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWIN 337


>gi|28898709|ref|NP_798314.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153839553|ref|ZP_01992220.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ3810]
 gi|260363692|ref|ZP_05776476.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus K5030]
 gi|260879741|ref|ZP_05892096.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|260898785|ref|ZP_05907226.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|260901598|ref|ZP_05909993.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|28806927|dbj|BAC60198.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149746934|gb|EDM57922.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ3810]
 gi|308086689|gb|EFO36384.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|308093260|gb|EFO42955.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|308108691|gb|EFO46231.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|308113401|gb|EFO50941.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus K5030]
          Length = 377

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q    +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWIN 338


>gi|325578589|ref|ZP_08148689.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159825|gb|EGC71955.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 376

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 285 KEWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWIN 337


>gi|328474726|gb|EGF45531.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           parahaemolyticus 10329]
          Length = 377

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q    +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWIN 338


>gi|51595597|ref|YP_069788.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 32953]
 gi|108806924|ref|YP_650840.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Antiqua]
 gi|108812924|ref|YP_648691.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Nepal516]
 gi|145599749|ref|YP_001163825.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|149366796|ref|ZP_01888830.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CA88-4125]
 gi|153950490|ref|YP_001401734.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 31758]
 gi|161484771|ref|NP_670275.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           KIM 10]
 gi|161511422|ref|NP_992302.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|162418296|ref|YP_001605847.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|165924721|ref|ZP_02220553.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938305|ref|ZP_02226863.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166009974|ref|ZP_02230872.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211802|ref|ZP_02237837.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167400353|ref|ZP_02305866.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419574|ref|ZP_02311327.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424117|ref|ZP_02315870.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470792|ref|ZP_02335496.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           FV-1]
 gi|170025073|ref|YP_001721578.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis YPIII]
 gi|186894660|ref|YP_001871772.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis PB1/+]
 gi|218928372|ref|YP_002346247.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           CO92]
 gi|229841157|ref|ZP_04461316.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229843262|ref|ZP_04463408.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229894122|ref|ZP_04509308.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Pestoides A]
 gi|229903354|ref|ZP_04518467.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Nepal516]
 gi|270487164|ref|ZP_06204238.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294503227|ref|YP_003567289.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|51588879|emb|CAH20493.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia
           pseudotuberculosis IP 32953]
 gi|108776572|gb|ABG19091.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Nepal516]
 gi|108778837|gb|ABG12895.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Antiqua]
 gi|115346983|emb|CAL19874.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CO92]
 gi|145211445|gb|ABP40852.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Pestoides F]
 gi|149291170|gb|EDM41245.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CA88-4125]
 gi|152961985|gb|ABS49446.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351111|gb|ABX85059.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|165913683|gb|EDR32302.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923781|gb|EDR40913.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165991370|gb|EDR43671.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207573|gb|EDR52053.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962315|gb|EDR58336.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050302|gb|EDR61710.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056966|gb|EDR66729.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751607|gb|ACA69125.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis
           YPIII]
 gi|186697686|gb|ACC88315.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+]
 gi|229679124|gb|EEO75227.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Nepal516]
 gi|229689609|gb|EEO81670.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229697523|gb|EEO87570.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229704007|gb|EEO91020.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Pestoides A]
 gi|262361266|gb|ACY57987.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D106004]
 gi|262365197|gb|ACY61754.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D182038]
 gi|270335668|gb|EFA46445.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294353686|gb|ADE64027.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|320015945|gb|ADV99516.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 376

 Score = 48.5 bits (114), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +++  ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWIN 337


>gi|284799957|ref|ZP_05985309.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           subflava NJ9703]
 gi|284796454|gb|EFC51801.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           subflava NJ9703]
          Length = 377

 Score = 48.1 bits (113), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 338


>gi|309379219|emb|CBX22176.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 384

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E Q++   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|21959884|gb|AAM86526.1|AE013899_3 ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Yersinia
           pestis KIM 10]
 gi|45435621|gb|AAS61179.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 391

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +++  ++P +    +E QQ+   +   A   E
Sbjct: 240 MEGNAKIIKMIARDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQE 299

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 300 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWIN 352


>gi|268591162|ref|ZP_06125383.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
 gi|291313388|gb|EFE53841.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
          Length = 378

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +  +A   E
Sbjct: 227 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVQAAEQE 286

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A     +G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 287 KEWADYLFSEGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWIN 339


>gi|253989035|ref|YP_003040391.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|211638141|emb|CAR66767.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
           reductase 1) (b2 protein) (r2 protein) [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253780485|emb|CAQ83647.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
           reductase 1) (b2 protein) (r2 protein) [Photorhabdus
           asymbiotica]
          Length = 376

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIANECEQQCYDLFVQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A     +G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFSEGSMIGLNRDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWIN 337


>gi|126174279|ref|YP_001050428.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS155]
 gi|125997484|gb|ABN61559.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella baltica OS155]
          Length = 376

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    I  I Q   ++P +     E QQ++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY++FI N+R   + L   +    NP PWM
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEFITNQRMKSVNLPQPYLEITNPLPWM 336


>gi|225075859|ref|ZP_03719058.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens
           NRL30031/H210]
 gi|224952805|gb|EEG34014.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens
           NRL30031/H210]
          Length = 388

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 236 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQE 295

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 296 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 349


>gi|319638203|ref|ZP_07992966.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria
           mucosa C102]
 gi|317400476|gb|EFV81134.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria
           mucosa C102]
          Length = 384

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 345


>gi|262165506|ref|ZP_06033243.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus VM223]
 gi|262025222|gb|EEY43890.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus VM223]
          Length = 377

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+S  +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLEP +     NP PW++
Sbjct: 285 KEWASYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWIN 338


>gi|207108882|ref|ZP_03243044.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPKX_438_CA4C1]
          Length = 79

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 2/64 (3%)

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETRVTEY 127
           +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       +++ NFFE RV+ Y
Sbjct: 11  LGLTSSLIEQYIQFLADSRLSKVGIAKVYG-VQHPIKWVESFSSFNEQRSNFFEARVSNY 69

Query: 128 QQGA 131
            +G+
Sbjct: 70  AKGS 73


>gi|262171721|ref|ZP_06039399.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|261892797|gb|EEY38783.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus MB-451]
          Length = 377

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+S  +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLEP +     NP PW++
Sbjct: 285 KEWASYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWIN 338


>gi|317164437|gb|ADV07978.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 377

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLSAGFEGANQNPIPWIN 338


>gi|258624428|ref|ZP_05719375.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM603]
 gi|258583275|gb|EEW08077.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM603]
          Length = 381

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+S  +  +A   E
Sbjct: 229 MEGNAKIIKLIARDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQE 288

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLEP +     NP PW++
Sbjct: 289 KEWASYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWIN 342


>gi|182682906|ref|YP_001837030.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage EPS7]
 gi|182630618|gb|ACB97550.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage EPS7]
          Length = 381

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 4/114 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GIA+  Q I +DE+LH      +I  +  +       E   K+ T L +    EI + H 
Sbjct: 227 GIAKNLQLIAKDEALHTQMSKAIIQIMFQQFDKDLVDEALAKAPTQLLKTLKTEIEWGHF 286

Query: 63  TMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVID 112
               +  +GLNA   E+Y+ F+       IG+E    L   T+NP PW+   +D
Sbjct: 287 IFKGRSLIGLNAELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLD 340


>gi|258620211|ref|ZP_05715250.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM573]
 gi|258587569|gb|EEW12279.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM573]
          Length = 381

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+S  +  +A   E
Sbjct: 229 MEGNAKIIKLIARDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQE 288

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GLEP +     NP PW++
Sbjct: 289 KEWASYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWIN 342


>gi|89074073|ref|ZP_01160574.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           sp. SKA34]
 gi|89050211|gb|EAR55722.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           sp. SKA34]
          Length = 377

 Score = 48.1 bits (113), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q    +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLLRNGHDDPEMVEIATECEQDCFDLFKAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL P ++  T+NP PW++
Sbjct: 285 KEWADYLFKDGSMIGLNKQILCQYVEYITNLRMVAVGLRPAYEGATQNPIPWIN 338


>gi|117920413|ref|YP_869605.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           ANA-3]
 gi|117612745|gb|ABK48199.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. ANA-3]
          Length = 391

 Score = 47.8 bits (112), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    I  I Q   ++P +     E QQ++  +  +A   E
Sbjct: 240 MEGNAKIIRLIARDEALHLNSTQHILTIMQGGKDDPEMAEIAAECQQEAYNLFLKAAEQE 299

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY+++I N+R   + L   +    NP PWM
Sbjct: 300 KEWAKYLFKDGSMIGLNEQILCQYVEYITNQRMKSVNLPLPYAELSNPLPWM 351


>gi|269963956|ref|ZP_06178265.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
           1DA3]
 gi|269831299|gb|EEZ85449.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
           1DA3]
          Length = 377

 Score = 47.8 bits (112), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q    +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPMAYPEATSNPIPWIN 338


>gi|238751211|ref|ZP_04612705.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           rohdei ATCC 43380]
 gi|238710485|gb|EEQ02709.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           rohdei ATCC 43380]
          Length = 399

 Score = 47.8 bits (112), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 248 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQE 307

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   FK   NP PW++
Sbjct: 308 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWIN 360


>gi|238761950|ref|ZP_04622923.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           kristensenii ATCC 33638]
 gi|238699678|gb|EEP92422.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           kristensenii ATCC 33638]
          Length = 400

 Score = 47.8 bits (112), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++   ++P +    +E QQ+   +   A   E
Sbjct: 249 MEGNAKIIKMIARDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQE 308

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 309 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWIN 361


>gi|332170225|gb|AEE19480.1| ATP-cone domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 425

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 18/140 (12%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE------ 56
           GI+   +   ++E +H +FGID+I  IK ENP  +  E     + M  EA   E      
Sbjct: 284 GISNVVEATSKEEQIHGDFGIDIIKIIKAENPEWFDAEHSATVQEMCKEAFKAESNIVDW 343

Query: 57  IAYAHET--MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVI 111
           I  A E   +PK  V        ++++   N+    IG+EP+F+  E       W  + I
Sbjct: 344 IFEAGELDFLPKALVN-------EFIKDRFNKSLTSIGIEPVFEVDETLLKDAEWFDDEI 396

Query: 112 DLKKEKNFFETRVTEYQQGA 131
              K  +FF  R   Y + A
Sbjct: 397 IGTKHGDFFVKRSVNYTKRA 416


>gi|238797463|ref|ZP_04640962.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           mollaretii ATCC 43969]
 gi|238718734|gb|EEQ10551.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           mollaretii ATCC 43969]
          Length = 376

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWIN 337


>gi|328722535|ref|XP_001944897.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Acyrthosiphon pisum]
          Length = 345

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 9/124 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G+    + I RDE LH +F   +         HL  K        ++ +A  +E  + 
Sbjct: 220 MLGLTFSNELIFRDEGLHTDFACLLFK-------HLDQKPPLTVITHIICKAVTIEQYFL 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +    VG++     +Y++F+A+R  +++G   +++ + NPFP+M +++  + + N F
Sbjct: 273 TNALLVKMVGMSCEKMAEYIEFVADRLLNELGCPAVYR-SSNPFPFM-DLLSQQGKTNGF 330

Query: 121 ETRV 124
           E RV
Sbjct: 331 EKRV 334


>gi|85711601|ref|ZP_01042658.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
           baltica OS145]
 gi|85694461|gb|EAQ32402.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
           baltica OS145]
          Length = 377

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 6/117 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE++HL     +IN  Q   ++P +    +E   ++  +   A   E
Sbjct: 225 MEGNAKIIRLIARDENVHLTSTQHMINLWQDGEDDPEMAEIAEELADEAYEIFMTAVKQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVI 111
             +AH     G  +GLN     QY+++IAN R   IG + P  +   NP PWM++ +
Sbjct: 285 KQWAHYLFRDGSMIGLNESMLCQYVEYIANLRMQAIGYDAPFPEQRSNPLPWMNKYL 341


>gi|269213593|ref|ZP_05982340.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           cinerea ATCC 14685]
 gi|269146056|gb|EEZ72474.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           cinerea ATCC 14685]
          Length = 377

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E Q++   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPIGFEGANQNPIPWIN 338


>gi|238753722|ref|ZP_04615083.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           ruckeri ATCC 29473]
 gi|238707958|gb|EEQ00315.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           ruckeri ATCC 29473]
          Length = 376

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   FK   NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWIN 337


>gi|12642668|gb|AAK00340.1| ribonucleotide reductase small subunit [Bovine herpesvirus 2]
          Length = 313

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 7/120 (5%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE++H      + N     +P    K    + R +  EA  +EIA+    MP+    
Sbjct: 190 ISRDEAVHTTASCCIYNNYIGAHP----KPPPTRVRQLFLEAVDIEIAFIRAKMPRDGQV 245

Query: 71  LN---APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 127
           L+     S E Y++F A+R    IG +PLF        +   ++   K  NFFE R T Y
Sbjct: 246 LSESAVASIENYVRFSADRLLCLIGDQPLFNAPPPDANFPLRLMSTDKHTNFFECRSTAY 305


>gi|329298015|ref|ZP_08255351.1| ribonucleotide-diphosphate reductase subunit beta [Plautia stali
           symbiont]
          Length = 376

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++        KE   + R     +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECFDLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|317048919|ref|YP_004116567.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
 gi|316950536|gb|ADU70011.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
          Length = 376

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++        KE   + R     +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECYDLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|221105497|ref|XP_002169241.1| PREDICTED: similar to ribonucleoside-diphosphate reductase small
           chain [Hydra magnipapillata]
          Length = 363

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +    I +DE +H  FG  +   I      ++   F++    M  EA  +  ++ 
Sbjct: 224 MKGLIQSNNLIAKDEGMHTIFGCVIYTFI------IYRLSFEEICELM-KEAVEICKSFT 276

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP--FPWMSEVIDLKKEKN 118
            + +    +G+N      Y++++A+R    +G E +F  T+ P  F +M  +  L K+ N
Sbjct: 277 KDAICVDMIGMNVELMYNYIEYVADRLMVYLGYEKIF-MTKIPDQFQFMDTIGFLNKD-N 334

Query: 119 FFETRVTEYQQG 130
           FFE R TEYQ+ 
Sbjct: 335 FFERRATEYQKA 346


>gi|126658748|ref|ZP_01729893.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
 gi|126620010|gb|EAZ90734.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
          Length = 347

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 9/140 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G A+  + I  DE  H++    +I +   +  +      + +   + H     EI + 
Sbjct: 209 LAGCAKLIKQINMDELTHVSLYQKLITEATTKFSYS-----EDEITELFHTTVEREIEWT 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
           +       +G++  S E Y +++AN R   IG+  ++   ENP+    W       K + 
Sbjct: 264 NHIFDGQILGVSKASTEAYTKYLANLRLKAIGIPAIYPKIENPYAHLDWADFKGIGKSKA 323

Query: 118 NFFETRVTEYQQGAGLK-WD 136
            FFET VT Y Q   +K WD
Sbjct: 324 AFFETEVTGYAQPTAVKGWD 343


>gi|162139926|ref|YP_339935.2| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 376

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRT--MLHEATLLE 56
           M G A+  + I RDE+LHL+    ++N  Q   ++P +     Q +     M  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   IG    FK   NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWIN 337


>gi|76875271|emb|CAI86492.1| ribonucleoside-diphosphate reductase 1, beta subunit
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 359

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRT--MLHEATLLE 56
           M G A+  + I RDE+LHL+    ++N  Q   ++P +     Q +     M  +A   E
Sbjct: 208 MEGNAKIIKLIARDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   IG    FK   NP PW++
Sbjct: 268 KEWAEYLFKDGSMIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWIN 320


>gi|59711808|ref|YP_204584.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio fischeri
           ES114]
 gi|197336251|ref|YP_002156001.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri
           MJ11]
 gi|59479909|gb|AAW85696.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Vibrio fischeri ES114]
 gi|197317741|gb|ACH67188.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri
           MJ11]
          Length = 377

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDESLHL     ++N ++   ++P       E +Q+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDESLHLTSTQHMLNLLRTGQDDPEFVEIAAECEQECFDLFKAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A+     G  +GLN     QY+++I N R   +GL   ++  T+NP PW++
Sbjct: 285 KQWANYLFKDGSMIGLNKDILCQYVEYITNLRMKAVGLNSAYEGATQNPIPWIN 338


>gi|126208467|ref|YP_001053692.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae L20]
 gi|165976419|ref|YP_001652012.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|303251074|ref|ZP_07337260.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307250239|ref|ZP_07532194.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307252630|ref|ZP_07534523.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307261475|ref|ZP_07543145.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|126097259|gb|ABN74087.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165876520|gb|ABY69568.1| ribonucleoside-diphosphate reductase, beta chain [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|302650084|gb|EFL80254.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306857725|gb|EFM89826.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306859875|gb|EFM91895.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306868827|gb|EFN00634.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 376

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL    +++N I    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     +Y+++I N R   +GL   F  + NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWIN 337


>gi|190150315|ref|YP_001968840.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303253584|ref|ZP_07339722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307245900|ref|ZP_07527985.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307247988|ref|ZP_07530018.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307254872|ref|ZP_07536697.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259315|ref|ZP_07541044.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307263658|ref|ZP_07545269.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915446|gb|ACE61698.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302647504|gb|EFL77722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306853260|gb|EFM85480.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306855503|gb|EFM87676.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306862169|gb|EFM94138.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866682|gb|EFM98541.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306871035|gb|EFN02768.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 376

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL    +++N I    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     +Y+++I N R   +GL   F  + NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWIN 337


>gi|156933156|ref|YP_001437072.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156531410|gb|ABU76236.1| hypothetical protein ESA_00966 [Cronobacter sakazakii ATCC BAA-894]
          Length = 376

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLMRSGEDDPEMAAIAEECKQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  FK   NP PW++
Sbjct: 285 KEWAEYLFQGGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWIN 337


>gi|260598671|ref|YP_003211242.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           turicensis z3032]
 gi|260217848|emb|CBA32365.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Cronobacter
           turicensis z3032]
          Length = 376

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLMRSGEDDPEMAIIAEECKQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  FK   NP PW++
Sbjct: 285 KEWAEYLFQGGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWIN 337


>gi|261400675|ref|ZP_05986800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           lactamica ATCC 23970]
 gi|269209585|gb|EEZ76040.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           lactamica ATCC 23970]
          Length = 377

 Score = 47.8 bits (112), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|332035983|gb|EGI72462.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 376

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRT--MLHEATLLE 56
           M G A+  + I RDE+LHL+    ++N  Q   ++P +     Q +     M  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   IGL   F+   NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWIN 337


>gi|212638239|ref|YP_002314759.1| ribonucleotide-diphosphate reductase subunit beta [Anoxybacillus
           flavithermus WK1]
 gi|212559719|gb|ACJ32774.1| Ribonucleotide reductase, beta subunit [Anoxybacillus flavithermus
           WK1]
          Length = 345

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 7/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL-WTKEFQQKSRTMLHEATLLEIAY 59
           M+  +    YI +DE  H  F   ++  +  ENP +     F       + EA   E  +
Sbjct: 204 MLKTSTMISYINKDELCHSYFISQLVRAVLWENPQIDENGAFSAWIYDYIDEAIRYETEW 263

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM----SEVIDLKK 115
           +   + +   G++    E+Y++++ N+R   +GL+  +   EN  PW+     E ++L K
Sbjct: 264 SRFVL-RDIDGIDVIEMEKYIEYLGNKRLRMLGLDDRYDADENSMPWIRVFSDENVNLGK 322

Query: 116 EKNFFETRVTEYQQGAGL 133
             +FFE R   Y +   +
Sbjct: 323 -TDFFEARPRSYTKTTDV 339


>gi|90581239|ref|ZP_01237037.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
           S14]
 gi|90437610|gb|EAS62803.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
           S14]
          Length = 377

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLLRNGHDDPEMAEIAAECEQECFDIFKAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL P +   T+NP PW++
Sbjct: 285 KEWADYLFKDGSMIGLNKQILCQYVEYITNLRMVAVGLRPAYDGATQNPIPWIN 338


>gi|91793308|ref|YP_562959.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           denitrificans OS217]
 gi|91715310|gb|ABE55236.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella denitrificans OS217]
          Length = 376

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    I  + Q   ++P +     E QQ++  + ++A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILALMQGGKDDPEMAEIAIECQQQAYDLFYKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY+++I N+R   + L   +    NP PWM
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEYITNQRMKSVHLPQPYAEISNPLPWM 336


>gi|315126539|ref|YP_004068542.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas sp. SM9913]
 gi|315015053|gb|ADT68391.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas sp. SM9913]
          Length = 376

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL+    ++N  Q   ++P +     + ++++  M  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCREEAIKMFVDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   IGL   F    NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKHILCQYVEYITNARMTAIGLPAQFDNNSNPIPWIN 337


>gi|161572976|ref|YP_207754.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA 1090]
 gi|194098862|ref|YP_002001926.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae NCCP11945]
 gi|239999147|ref|ZP_04719071.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae 35/02]
 gi|240013945|ref|ZP_04720858.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae DGI18]
 gi|240016387|ref|ZP_04722927.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA6140]
 gi|240080506|ref|ZP_04725049.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA19]
 gi|240113126|ref|ZP_04727616.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae MS11]
 gi|240115882|ref|ZP_04729944.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID18]
 gi|240118180|ref|ZP_04732242.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID1]
 gi|240121514|ref|ZP_04734476.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID24-1]
 gi|240123728|ref|ZP_04736684.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID332]
 gi|240125919|ref|ZP_04738805.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae SK-92-679]
 gi|240128431|ref|ZP_04741092.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae SK-93-1035]
 gi|193934152|gb|ACF29976.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae NCCP11945]
          Length = 377

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|93005945|ref|YP_580382.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           cryohalolentis K5]
 gi|92393623|gb|ABE74898.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter cryohalolentis K5]
          Length = 377

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++I  ++P +    KE  ++S  +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F  ++ NP PW++
Sbjct: 285 KEWAGYLFKDGSMIGLNKDILCQYIEYITNLRMEAVGLPVAFPNSKSNPIPWIN 338


>gi|313668429|ref|YP_004048713.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           lactamica ST-640]
 gi|313005891|emb|CBN87347.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           lactamica 020-06]
          Length = 377

 Score = 47.4 bits (111), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFRLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|296103863|ref|YP_003614009.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058322|gb|ADF63060.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 376

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|241760495|ref|ZP_04758588.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           flavescens SK114]
 gi|241318999|gb|EER55501.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           flavescens SK114]
          Length = 377

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 338


>gi|255065945|ref|ZP_05317800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca
           ATCC 29256]
 gi|255049856|gb|EET45320.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca
           ATCC 29256]
          Length = 377

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFKLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 338


>gi|149190928|ref|ZP_01869191.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
           AK1]
 gi|148835283|gb|EDL52257.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
           AK1]
          Length = 377

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q    +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQDCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I+N R   +GL+  + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYISNVRMQAVGLDAAYPEATSNPIPWIN 338


>gi|119472403|ref|ZP_01614521.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales
           bacterium TW-7]
 gi|119444925|gb|EAW26223.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales
           bacterium TW-7]
          Length = 376

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRT--MLHEATLLE 56
           M G A+  + I RDE+LHL+    ++N  Q   ++P +     Q +     M  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   IGL   F+   NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWIN 337


>gi|90412217|ref|ZP_01220223.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           profundum 3TCK]
 gi|90326941|gb|EAS43326.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           profundum 3TCK]
          Length = 377

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFEIFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  +    +NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKEILCQYVEYITNLRMKAVGLDQAYPGANQNPIPWIN 338


>gi|15079087|ref|NP_149839.1| 376L [Invertebrate iridescent virus 6]
 gi|82012049|sp|Q91FE8|RIR2_IIV6 RecName: Full=Probable ribonucleoside-diphosphate reductase small
           subunit 376L; AltName: Full=Ribonucleotide reductase
           small subunit
 gi|15042456|gb|AAK82236.1|AF303741_377 376L [Invertebrate iridescent virus 6]
          Length = 360

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 66  KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFFET 122
           K F GL     + Y+++IA+RR + +G + +F    Y  NP P +  +I+     NFFE 
Sbjct: 279 KDFFGLTPQRLKAYIKYIADRRLNLMGYKSIFNLEPYPTNPLPELEIMINAPTHTNFFEN 338

Query: 123 RVTEY 127
           R T+Y
Sbjct: 339 RSTDY 343


>gi|254493923|ref|ZP_05107094.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291]
 gi|260440303|ref|ZP_05794119.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae DGI2]
 gi|268594982|ref|ZP_06129149.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae 35/02]
 gi|268596639|ref|ZP_06130806.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae FA19]
 gi|268599210|ref|ZP_06133377.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11]
 gi|268601557|ref|ZP_06135724.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18]
 gi|268603896|ref|ZP_06138063.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1]
 gi|268682359|ref|ZP_06149221.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332]
 gi|268684517|ref|ZP_06151379.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268686827|ref|ZP_06153689.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291043595|ref|ZP_06569311.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae DGI2]
 gi|293398906|ref|ZP_06643071.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           gonorrhoeae F62]
 gi|59717937|gb|AAW89342.1| putative ribonucleoside diphosphate reductase I beta chain
           [Neisseria gonorrhoeae FA 1090]
 gi|226512963|gb|EEH62308.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291]
 gi|268548371|gb|EEZ43789.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae 35/02]
 gi|268550427|gb|EEZ45446.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae FA19]
 gi|268583341|gb|EEZ48017.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11]
 gi|268585688|gb|EEZ50364.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18]
 gi|268588027|gb|EEZ52703.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1]
 gi|268622643|gb|EEZ55043.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332]
 gi|268624801|gb|EEZ57201.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268627111|gb|EEZ59511.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291012058|gb|EFE04047.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae DGI2]
 gi|291610320|gb|EFF39430.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           gonorrhoeae F62]
          Length = 384

 Score = 47.4 bits (111), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|284009345|emb|CBA76525.1| ribonucleoside-diphosphate reductase 1, beta subunit [Arsenophonus
           nasoniae]
          Length = 378

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    KE ++    +  +A   E
Sbjct: 227 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGQDDPEMAIIAKECEEACYRLFVQAAEQE 286

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 287 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWIN 339


>gi|298368555|ref|ZP_06979873.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298282558|gb|EFI24045.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 384

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 345


>gi|269102947|ref|ZP_06155644.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268162845|gb|EEZ41341.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 377

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    KE + +   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLLRNGHDDPEMAEIAKESEAECFDIFKRAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R + +GLE  +   T+NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNLRMNAVGLEHAYTGATQNPIPWIN 338


>gi|270262779|ref|ZP_06191050.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia
           odorifera 4Rx13]
 gi|270043463|gb|EFA16556.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia
           odorifera 4Rx13]
          Length = 359

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 208 MEGNAKIIKLIARDEALHLTGTQHILNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 268 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLGLPFETRSNPIPWIN 320


>gi|24373963|ref|NP_718006.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           oneidensis MR-1]
 gi|24348405|gb|AAN55450.1|AE015682_5 ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           oneidensis MR-1]
          Length = 376

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    I  I Q   ++P +     E QQ++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILTIMQGGKDDPEMGEIAIECQQEAYNLFLKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY+++I N+R   + L   +    NP PWM
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQTNPLPWM 336


>gi|312885176|ref|ZP_07744856.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309367189|gb|EFP94761.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 377

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLDAAYPEATSNPIPWIN 338


>gi|307257037|ref|ZP_07538813.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864521|gb|EFM96428.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 376

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL    +++N I    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     +Y+++I N R   +GL   F    NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNEDILVKYVEYITNIRMQAVGLPRPFATASNPIPWIN 337


>gi|294140834|ref|YP_003556812.1| ribonucleoside-diphosphate reductase subunit beta [Shewanella
           violacea DSS12]
 gi|293327303|dbj|BAJ02034.1| ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           violacea DSS12]
          Length = 376

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++  ++   ++P +    KE +Q +  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILKIMRAGADDPEMGEIAKECEQLAYDIFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY+++I N R   + L   +    NP PWM
Sbjct: 285 KEWAQYLFKDGSMIGLNQAILCQYVEYITNERMKSVNLPCHYDEITNPLPWM 336


>gi|4389292|pdb|1BIQ|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
           E238a
 gi|40889714|pdb|1RSV|A Chain A, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
           Ribonucleotide Reductase
 gi|40889715|pdb|1RSV|B Chain B, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
           Ribonucleotide Reductase
          Length = 375

 Score = 47.0 bits (110), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RD +LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|261364564|ref|ZP_05977447.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           mucosa ATCC 25996]
 gi|288567131|gb|EFC88691.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           mucosa ATCC 25996]
          Length = 384

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFELFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 345


>gi|4389291|pdb|1BIQ|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
           E238a
          Length = 375

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RD +LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 336


>gi|290508492|ref|ZP_06547863.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
           1_1_55]
 gi|289777886|gb|EFD85883.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
           1_1_55]
          Length = 405

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E
Sbjct: 254 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQE 313

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 314 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 366


>gi|215275540|sp|P0C8I2|RIR2_ASFWA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 47.0 bits (110), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---I 57
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L    I
Sbjct: 184 MPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFI 237

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
           +YA +       G +     QY+++  +  C  +  + ++K   NPFP M++    + EK
Sbjct: 238 SYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEK 296

Query: 118 -NFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 297 TNFFELRPTQYQ 308


>gi|251790602|ref|YP_003005323.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya zeae
           Ech1591]
 gi|247539223|gb|ACT07844.1| ribonucleotide reductase [Dickeya zeae Ech1591]
          Length = 376

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRAGQDDPEMAQVAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWIN 337


>gi|322514736|ref|ZP_08067762.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
 gi|322119331|gb|EFX91447.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
          Length = 376

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL    +++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEYLHLTGTQNMLNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     +Y+++I N R   +GL   F  + NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNEDILVKYVEYITNIRMQAVGLPRPFATSSNPIPWIN 337


>gi|152971181|ref|YP_001336290.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206577425|ref|YP_002237361.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|262043285|ref|ZP_06016416.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288934289|ref|YP_003438348.1| ribonucleotide reductase [Klebsiella variicola At-22]
 gi|330000612|ref|ZP_08303755.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|150956030|gb|ABR78060.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206566483|gb|ACI08259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|259039384|gb|EEW40524.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288889018|gb|ADC57336.1| ribonucleotide reductase [Klebsiella variicola At-22]
 gi|328537954|gb|EGF64133.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 376

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 337


>gi|51557509|ref|YP_068343.1| ribonucleotide reductase subunit 2 [Suid herpesvirus 1]
 gi|1710400|sp|P50645|RIR2_SUHVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|437737|emb|CAA50977.1| ribonucleotide reductase [Suid herpesvirus 1]
 gi|525265|emb|CAA56776.1| ribonucleotid reductase, small subunit [Suid herpesvirus 1]
 gi|40253968|tpg|DAA02163.1| TPA_exp: small subunit of ribonucleotide reductase [Suid
           herpesvirus 1]
 gi|1090510|prf||2019240B ribonucleotide reductase:SUBUNIT=small
          Length = 303

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 4/126 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
           V   +   +I RDE++H +    + N    + P        Q    +  EA  +E  +  
Sbjct: 174 VVTCQSNDFISRDEAIHTSASCCIYNNYLGDAPRPDEARIHQ----LFAEAVEIECEFLR 229

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
              P+  + L+ P+   Y+++ A+R    IG  PLF        +   ++  +K  NFFE
Sbjct: 230 ARAPRDSLLLDLPAIISYVRYSADRLLQAIGASPLFGAPAPAADFPMALMVAEKHTNFFE 289

Query: 122 TRVTEY 127
            R T Y
Sbjct: 290 RRSTNY 295


>gi|319779630|ref|YP_004130543.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Taylorella equigenitalis MCE9]
 gi|317109654|gb|ADU92400.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Taylorella equigenitalis MCE9]
          Length = 377

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +     E + +   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMLNIMSSGADDPEMAHIASELKNQCFELFKSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
            A+A      G  +GLN     QY+++I N R   +GLE  F +  +NP PW++
Sbjct: 285 KAWAEYLFKDGSMIGLNKEILIQYVEYITNIRMSAVGLEEAFPQSKQNPIPWIN 338


>gi|307129979|ref|YP_003881995.1| Ribonucleotide reductase of class Ia (aerobic), subunit beta
           [Dickeya dadantii 3937]
 gi|306527508|gb|ADM97438.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Dickeya dadantii 3937]
          Length = 376

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRAGQDDPEMAKIAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWIN 337


>gi|323145837|gb|ADX32078.1| hypothetical protein [Pseudomonas phage P3_CHA]
 gi|323146023|gb|ADX32263.1| hypothetical protein [Pseudomonas phage PAK_P3]
          Length = 344

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 1/131 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           ++G  +  Q+ + DE+ H+   I V+  ++ +          Q+ R ++ +    E+ Y 
Sbjct: 194 LIGFNDINQWSLADETDHVEKNIRVLKAMRKDLTPEENSILDQEIRYLIEDYREAEVKYL 253

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                KG    L      +Y+ ++   R  +  L    +  ENP PWM  +I+  +  NF
Sbjct: 254 VLAFEKGPQHDLTFEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNF 313

Query: 120 FETRVTEYQQG 130
           FE +VT+Y   
Sbjct: 314 FEKKVTDYSHS 324


>gi|238895770|ref|YP_002920506.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238548088|dbj|BAH64439.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 396

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E
Sbjct: 245 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQE 304

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 305 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 357


>gi|332162349|ref|YP_004298926.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318606422|emb|CBY27920.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325666579|gb|ADZ43223.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330864218|emb|CBX74276.1| ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           enterocolitica W22703]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWIN 337


>gi|27366311|ref|NP_761839.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           vulnificus CMCP6]
 gi|37679427|ref|NP_934036.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           vulnificus YJ016]
 gi|320156821|ref|YP_004189200.1| ribonucleotide reductase of class Ia (aerobic), subunit beta
           [Vibrio vulnificus MO6-24/O]
 gi|27362512|gb|AAO11366.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio vulnificus CMCP6]
 gi|37198171|dbj|BAC94007.1| ribonucleotide reductase, beta subunit [Vibrio vulnificus YJ016]
 gi|319932133|gb|ADV86997.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio vulnificus MO6-24/O]
          Length = 377

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQQCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   +   T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLPVAYPNATSNPIPWIN 338


>gi|282600304|ref|ZP_05973774.2| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
 gi|282565783|gb|EFB71318.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
          Length = 380

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +++   +  +A   E
Sbjct: 229 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEEQCYQLFVDAAEQE 288

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A     +G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 289 KEWAEYLFSEGSMIGLNKEILCQYVEYITNIRMQAVGLKLPFEARSNPIPWIN 341


>gi|271499642|ref|YP_003332667.1| ribonucleotide reductase [Dickeya dadantii Ech586]
 gi|270343197|gb|ACZ75962.1| ribonucleotide reductase [Dickeya dadantii Ech586]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRAGQDDPEMAQIAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWIN 337


>gi|327198239|ref|YP_004306815.1| putative ribonucleotide reductase B subunit [Pseudomonas phage
           KPP10]
 gi|297591765|dbj|BAJ09185.1| putative ribonucleotide reductase B subunit [Pseudomonas phage
           KPP10]
          Length = 339

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 1/131 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           ++G  +  Q+ + DE+ H+   I V+  ++ +          Q+ R ++ +    E+ Y 
Sbjct: 189 LIGFNDINQWSLADETDHVEKNIRVLKAMRKDLTPEENAILDQEIRYLIEDYREAEVKYL 248

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                KG    L      +Y+ ++   R  +  L    +  ENP PWM  +I+  +  NF
Sbjct: 249 VLAFEKGPQHDLTFEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNF 308

Query: 120 FETRVTEYQQG 130
           FE +VT+Y   
Sbjct: 309 FEKKVTDYSHS 319


>gi|242238482|ref|YP_002986663.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya dadantii
           Ech703]
 gi|242130539|gb|ACS84841.1| ribonucleotide reductase [Dickeya dadantii Ech703]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGQDDPEMAKVAEECQQQCYDLFVMAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWIN 337


>gi|50120137|ref|YP_049304.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610663|emb|CAG74108.1| ribonucleoside-diphosphate reductase 1 beta chain [Pectobacterium
           atrosepticum SCRI1043]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQGVGLSLPFQTRTNPIPWIN 337


>gi|183599610|ref|ZP_02961103.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
 gi|188021860|gb|EDU59900.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
          Length = 378

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E + +   +  +A   E
Sbjct: 227 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEDECYKLFVDAAEQE 286

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A     +G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 287 KEWAEYLFSEGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWIN 339


>gi|123441721|ref|YP_001005705.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088682|emb|CAL11484.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWIN 337


>gi|238788616|ref|ZP_04632408.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           frederiksenii ATCC 33641]
 gi|238723211|gb|EEQ14859.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           frederiksenii ATCC 33641]
          Length = 383

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 232 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 292 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWIN 344


>gi|312162814|ref|YP_003933799.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1]
 gi|308096447|gb|ADO13787.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1]
          Length = 338

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 13/123 (10%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE++H      + N      P    K    +   +  EA  +EI + H   P+    
Sbjct: 215 ISRDEAIHTTASCYIYNNYLTGYP----KPSTDRIHYLFREAVEIEIRFIHSQAPRDSHI 270

Query: 71  LNAPSCEQ---YMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEKNFFETRV 124
           L+A +  Q   Y+ F A+R    I L PLF   + P P  S  + L   +K  NFFE+R 
Sbjct: 271 LDAAALRQIDNYVHFCADRLLKMIKLPPLF---DAPAPDCSFPLALMFTEKHTNFFESRS 327

Query: 125 TEY 127
           T Y
Sbjct: 328 TAY 330


>gi|253687496|ref|YP_003016686.1| ribonucleotide reductase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754074|gb|ACT12150.1| ribonucleotide reductase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWIN 337


>gi|225023977|ref|ZP_03713169.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC
           23834]
 gi|224943002|gb|EEG24211.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC
           23834]
          Length = 384

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +     +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRSGTDDPEMAEIAAELENDCFELFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F   T+NP PW++
Sbjct: 292 KEWAEYLFKDGSMIGLNKDILCQYVEYITNHRMMAVGLNAAFPAATQNPIPWIN 345


>gi|114563305|ref|YP_750818.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           frigidimarina NCIMB 400]
 gi|114334598|gb|ABI71980.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella frigidimarina NCIMB 400]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    I  + Q   ++P +     E +Q++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILALMQGGKDDPEMGEIAAECKQEAYDLFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY++FI N+R   + L   +    NP PWM
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEFITNQRMKSVHLPQPYDEQSNPLPWM 336


>gi|261868068|ref|YP_003255990.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|293389919|ref|ZP_06634253.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|261413400|gb|ACX82771.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|290950453|gb|EFE00572.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 329

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 4/131 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E +H  FGI + + ++ E P L+T EF  + + +  +A   E A    
Sbjct: 188 GISNAVEATSKEEEIHGRFGISLYHLLREEQPELFTDEFYAELKELAEQAFNAEKAILDW 247

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKN 118
               G +  L+  + E Y+    N     +GLEP++  +        W    I   KE +
Sbjct: 248 IFEDGELSFLSKATVENYIANRYNNSLVTLGLEPIYNISPAQLKETEWFDIEILSTKETD 307

Query: 119 FFETRVTEYQQ 129
           FF  R T+Y +
Sbjct: 308 FFNKRSTDYSK 318


>gi|227328222|ref|ZP_03832246.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWIN 337


>gi|269865122|ref|XP_002651812.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063829|gb|EED42244.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 336

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 9/115 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H +          ++ EA  +E  + 
Sbjct: 207 MPGLTFSNELISRDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
            E++P   +G+N     QY++F+A+R    +G   ++ +  +   W + V   K+
Sbjct: 258 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGERKIYTFLTHSISWKTSVCKAKQ 312


>gi|46401830|ref|YP_006922.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage T5]
 gi|45775008|gb|AAS77140.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage T5]
 gi|51512032|gb|AAU05231.1| ribonucleotide reductase beta subunit [Enterobacteria phage T5]
 gi|59897231|gb|AAX12026.1| ribonucleoside diphosphate reductase I beta chain [Enterobacteria
           phage T5]
          Length = 381

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 4/114 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GIA+  Q I +DE+LH      +I  +  +       E   K+   L +    EI + H 
Sbjct: 227 GIAKNLQLIAKDEALHTQMSKAIIQIMFQQFDKDLVDEAVAKAPAQLLKTLKTEIEWGHF 286

Query: 63  TMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVID 112
               +  +GLNA   E+Y+ F+       IG+E    L   T+NP PW+   +D
Sbjct: 287 IFKGRSLIGLNAELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLD 340


>gi|193062401|ref|ZP_03043496.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
 gi|192932067|gb|EDV84666.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
          Length = 393

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E + +   +  +A   E
Sbjct: 242 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKLECYDLFVQAAQQE 301

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 302 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 354


>gi|326783875|ref|YP_004324269.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
 gi|310003887|gb|ADO98282.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
          Length = 388

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 12/145 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRT----MLHEATLL 55
           M G A+    I RDE+ HL    +++ N +  ++P +  K+   + R     M   A   
Sbjct: 236 MEGSAKIISLISRDENQHLVLTQNILKNWMNGDDPEM--KQIADEERNNVIGMFRNAVEE 293

Query: 56  EIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVID 112
           E  +A      G  +GLN     QY+++IAN+R   +G +P++      NP PW    I 
Sbjct: 294 EKEWAEYLFSGGSMIGLNDKLLNQYVEWIANKRMKALGFDPIYDQPLRNNPLPWTQHWIS 353

Query: 113 LKK-EKNFFETRVTEYQQGAGLKWD 136
            K  +    ET V  Y  G G+K D
Sbjct: 354 SKGLQVAPQETEVESYVVG-GIKQD 377


>gi|261822457|ref|YP_003260563.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           wasabiae WPP163]
 gi|261606470|gb|ACX88956.1| ribonucleotide reductase [Pectobacterium wasabiae WPP163]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWIN 337


>gi|209695249|ref|YP_002263178.1| ribonucleotide-diphosphate reductase subunit beta [Aliivibrio
           salmonicida LFI1238]
 gi|208009201|emb|CAQ79455.1| ribonucleoside-diphosphate reductase 1 beta chain [Aliivibrio
           salmonicida LFI1238]
          Length = 377

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P       E +Q    +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMVNLLRTGQDDPEFVEIAAECEQDCFDLFKAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A+     G  +GLN     QY+++I N R   +GL   +   T+NP PW++
Sbjct: 285 KEWANYLFKDGSMIGLNKDILCQYVEYITNLRMKAVGLSGAYDGATQNPIPWIN 338


>gi|227114436|ref|ZP_03828092.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWIN 337


>gi|127512873|ref|YP_001094070.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           loihica PV-4]
 gi|126638168|gb|ABO23811.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella loihica PV-4]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++  ++   ++P +    KE +Q +  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILKLMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY+++I N R   + L   +    NP PWM
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEYITNERMKSVNLVSPYADQSNPLPWM 336


>gi|294788520|ref|ZP_06753762.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella
           muelleri ATCC 29453]
 gi|294483397|gb|EFG31082.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella
           muelleri ATCC 29453]
          Length = 384

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E   +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRNGTDDPEMAEIAAELHDECVALFKKAAAQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F K  +NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKDILGQYVEYITNLRMSAVGLPQAFPKALQNPIPWIN 345


>gi|317492553|ref|ZP_07950980.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919303|gb|EFV40635.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHILNLMRSGQDDPEMAEVAVECEQQCYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFQTRSNPIPWIN 337


>gi|162849427|emb|CAN10392.1| Ribonucleotide reductase small subunit [African swine fever virus
           OURT 88/3]
 gi|291289488|emb|CBH29145.1| BA71V-F334L [African swine fever virus E75]
 gi|303398729|emb|CBW46710.1| F334L [African swine fever virus Georgia 2007/1]
          Length = 334

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---I 57
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L    I
Sbjct: 191 MPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFI 244

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
            YA +       G +     QY+++  +  C  +  + ++K   NPFP M++    + EK
Sbjct: 245 NYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEK 303

Query: 118 -NFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 304 TNFFELRPTQYQ 315


>gi|237747538|ref|ZP_04578018.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter
           formigenes OXCC13]
 gi|229378900|gb|EEO28991.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter
           formigenes OXCC13]
          Length = 376

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +    KE +++S  +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLMGSGEDDPDMAEIAKECREQSIDLFVRAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +G+   F+   NP PW++
Sbjct: 285 KEWADYLFRDGSMIGLNRDILCQYVEYITNTRMQAVGMPLPFEIRSNPIPWIN 337


>gi|162849254|emb|CAN10143.1| Ribonucleotide reductase small subunit [African swine fever virus
           Benin 97/1]
          Length = 327

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---I 57
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L    I
Sbjct: 184 MPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFI 237

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
            YA +       G +     QY+++  +  C  +  + ++K   NPFP M++    + EK
Sbjct: 238 NYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEK 296

Query: 118 -NFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 297 TNFFELRPTQYQ 308


>gi|294637129|ref|ZP_06715438.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
           tarda ATCC 23685]
 gi|291089663|gb|EFE22224.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
           tarda ATCC 23685]
          Length = 376

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E + +   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHILNLMRSGQDDPEMAEIAAECETQCYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KDWASYLFRDGSMIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWIN 337


>gi|215275539|sp|P0C8I1|RIR2_ASFP4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---I 57
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L    I
Sbjct: 184 MPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPE------ERIIHKILKEAVELVDEFI 237

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
            YA +       G +     QY+++  +  C  +  + ++K   NPFP M++    + EK
Sbjct: 238 NYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEK 296

Query: 118 -NFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 297 TNFFELRPTQYQ 308


>gi|33152746|ref|NP_874099.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           ducreyi 35000HP]
 gi|33148970|gb|AAP96488.1| ribonucleoside-diphosphate reductase, beta chain [Haemophilus
           ducreyi 35000HP]
          Length = 376

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     ++N I    ++P +     E QQ++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEYLHLAGTQQMLNIIASGQDDPEMAEIAIECQQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     +Y+++I N R   +GL   F    NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKEILVKYVEYITNIRMQSVGLPLPFATQSNPIPWIN 337


>gi|167623961|ref|YP_001674255.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           halifaxensis HAW-EB4]
 gi|167353983|gb|ABZ76596.1| Ribonucleoside-diphosphate reductase [Shewanella halifaxensis
           HAW-EB4]
          Length = 376

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG--IDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    I  I Q   ++P +    KE +Q +  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILKIMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY+++I N R   +     +    NP PWM
Sbjct: 285 KEWAKYLFKDGSMIGLNETILCQYVEYITNERMKSVNFASPYAEQTNPLPWM 336


>gi|323494790|ref|ZP_08099889.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           brasiliensis LMG 20546]
 gi|323310983|gb|EGA64148.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           brasiliensis LMG 20546]
          Length = 377

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWIN 338


>gi|260778827|ref|ZP_05887719.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260604991|gb|EEX31286.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 377

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWIN 338


>gi|9628152|ref|NP_042738.1| ribonucleotide reductase small subunit [African swine fever virus]
 gi|1172939|sp|P42492|RIR2_ASFB7 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|780414|gb|AAA65274.1| ribonucleotide reductase small subunit [African swine fever virus]
 gi|1097433|prf||2113434AT ribonucleotide reductase:SUBUNIT=small
          Length = 334

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---I 57
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L    I
Sbjct: 191 MPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFI 244

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
            YA +       G +     QY+++  +  C  +  + ++K   NPFP M++    + EK
Sbjct: 245 NYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEK 303

Query: 118 -NFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 304 TNFFELRPTQYQ 315


>gi|117530173|ref|YP_851016.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|86990305|dbj|BAE79256.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|117165785|dbj|BAF36093.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|124270949|dbj|BAF45776.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-LMM02]
 gi|124270951|dbj|BAF45777.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-LMM03]
 gi|124270953|dbj|BAF45778.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-HPM05]
          Length = 348

 Score = 45.8 bits (107), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 15/146 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   A+  + I RDE  HL    ++I     E   +W  +   +   +  +A   EI + 
Sbjct: 206 MSATADIIKLIERDEQTHLKLISNIIRTGLAEGTLMWDTD---EIIDLFRKAAEYEIEWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVI-----D 112
              +  G  G+NA + EQY +++ N R   IGL  +F   +Y+ NP+  +         D
Sbjct: 263 LH-IGLGVNGINATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGED 321

Query: 113 LKKEKNFFETRVTEYQQGAGL--KWD 136
                NFFE+ V  Y+  A +   WD
Sbjct: 322 SITRDNFFESGVI-YRNPAKVVDGWD 346


>gi|325268103|ref|ZP_08134749.1| ribonucleotide-diphosphate reductase beta subunit [Kingella
           denitrificans ATCC 33394]
 gi|324980488|gb|EGC16154.1| ribonucleotide-diphosphate reductase beta subunit [Kingella
           denitrificans ATCC 33394]
          Length = 384

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL-WTK---EFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +    W +   + QQ+   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRGGSEGTEWAQIAQDLQQECFDLFVKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F K T+NP PW++
Sbjct: 292 KEWASYLFKDGSMIGLNKDILCQYVEYITNHRMLAVGLPVAFPKSTQNPIPWIN 345


>gi|269139684|ref|YP_003296385.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
 gi|267985345|gb|ACY85174.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
 gi|304559553|gb|ADM42217.1| Ribonucleotide reductase of class Ia, beta subunit [Edwardsiella
           tarda FL6-60]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E + +   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHILNLMRSGQDDPEMAEIAAECEDQCYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWAGYLFRDGSMIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWIN 337


>gi|9629745|ref|NP_045237.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 4]
 gi|2605963|gb|AAC59535.1| 20 [Equid herpesvirus 4]
          Length = 320

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 12/122 (9%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPK 66
           I RDE++H N    + N         +   F++ + T    +  EA  +E  +     PK
Sbjct: 200 ISRDEAIHTNASCCIYNN--------YLGGFEKPAPTRIYALFSEAVNIECEFLLSHAPK 251

Query: 67  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 126
               L+  +   Y+++ A+R   +IGL PLF   + P  +    + ++K  NFFE R T 
Sbjct: 252 STHLLDIEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTA 311

Query: 127 YQ 128
           Y 
Sbjct: 312 YS 313


>gi|1710396|sp|P50644|RIR2_EHV4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|515833|emb|CAA53101.1| ribonucleoside-diphosphate reductase [Equid herpesvirus 4]
          Length = 320

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 12/122 (9%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT----MLHEATLLEIAYAHETMPK 66
           I RDE++H N    + N         +   F++ + T    +  EA  +E  +     PK
Sbjct: 200 ISRDEAIHTNASCCIYNN--------YLGGFEKPAPTRIYALFSEAVNIECEFLLSHAPK 251

Query: 67  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTE 126
               L+  +   Y+++ A+R   +IGL PLF   + P  +    + ++K  NFFE R T 
Sbjct: 252 SSHLLDIEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERRSTA 311

Query: 127 YQ 128
           Y 
Sbjct: 312 YS 313


>gi|238794995|ref|ZP_04638591.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           intermedia ATCC 29909]
 gi|238725698|gb|EEQ17256.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           intermedia ATCC 29909]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAIECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGVPFATRTNPIPWIN 337


>gi|119774862|ref|YP_927602.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           amazonensis SB2B]
 gi|119767362|gb|ABL99932.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella amazonensis SB2B]
          Length = 391

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEF----QQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++N ++         E     QQ++  +   A   E
Sbjct: 240 MEGNAKIIRLIARDEALHLNSTQHILNIMQGGKDDAEMAEIAIECQQEAYDLFLRAAEQE 299

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY+++I N+R   + L   +  + NP PWM
Sbjct: 300 KEWAKYLFKDGSMIGLNEQILCQYVEYITNQRMKSVNLPLPYPESTNPLPWM 351


>gi|238760194|ref|ZP_04621340.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           aldovae ATCC 35236]
 gi|238701573|gb|EEP94144.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           aldovae ATCC 35236]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRAGEDDPEMAEIAIECQQQCYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGIPFATRTNPIPWIN 337


>gi|157371509|ref|YP_001479498.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           proteamaculans 568]
 gi|157323273|gb|ABV42370.1| Ribonucleoside-diphosphate reductase [Serratia proteamaculans 568]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLGLPFATRSNPIPWIN 337


>gi|91775577|ref|YP_545333.1| ribonucleotide-diphosphate reductase subunit beta [Methylobacillus
           flagellatus KT]
 gi|91709564|gb|ABE49492.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Methylobacillus flagellatus KT]
          Length = 377

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P       E Q +   M   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNIMRSGQDDPEFAGIASELQDECFEMFKRAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F   + NP PW++
Sbjct: 285 KKWADYLFKDGSMIGLNRDILCQYVEYITNNRMASVGLSAAFPNAKNNPIPWIN 338


>gi|82492124|gb|ABB77921.1| ribonucleotide reductase beta chain [Environmental halophage 1
           AAJ-2005]
          Length = 358

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 4/131 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GIA   +   ++E +H  FG +++  I+ ENP L+  +F  + +    +A   E      
Sbjct: 217 GIANAVEATSKEEQIHGLFGQELVETIREENPDLFDDDFTDEIQDACQQAYEAESEILDW 276

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKN 118
            +  G +  L     + +++   N+     G++P+F   E+      W  E I + KE +
Sbjct: 277 ILEDGELDFLPREHIDAFLKDRFNQSLDNAGVDPVFDPDEDVVDETRWFDEDIMMTKEND 336

Query: 119 FFETRVTEYQQ 129
           FF  R T Y +
Sbjct: 337 FFSKRSTTYNK 347


>gi|294505968|ref|YP_003570026.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter
           ruber M8]
 gi|294342296|emb|CBH23074.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter
           ruber M8]
          Length = 324

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 4/131 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A   +   ++E +H  FG++++N I+ E+P  +   F+Q+ R    EA   E      
Sbjct: 183 GVANAVEATSKEEQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLDW 242

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKN 118
               G +  L  P  + +++   N     + ++P+F+          W  E I L K  +
Sbjct: 243 IFADGELDFLPRPVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEILLTKGND 302

Query: 119 FFETRVTEYQQ 129
           FF  R T Y +
Sbjct: 303 FFSKRSTSYSK 313


>gi|261253084|ref|ZP_05945657.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           orientalis CIP 102891]
 gi|260936475|gb|EEX92464.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           orientalis CIP 102891]
          Length = 377

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWIN 338


>gi|27904669|ref|NP_777795.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
 gi|38605263|sp|Q89AS5|RIR2_BUCBP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|27904066|gb|AAO26900.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI----KIENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +      E     +KE  ++   +    +  E
Sbjct: 225 MEGNAKIIRLIARDEALHLTSTQHILNILHNDKNNEGMSDISKECYEECYHLFIRVSDQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   IGL   FK   NP PW++
Sbjct: 285 KIWAKYLFQNGSMLGLNQEILSQYIEYITNIRMKAIGLPSPFKILSNPIPWIN 337


>gi|84386981|ref|ZP_00990005.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           splendidus 12B01]
 gi|86148466|ref|ZP_01066756.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|218709927|ref|YP_002417548.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           splendidus LGP32]
 gi|84378271|gb|EAP95130.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           splendidus 12B01]
 gi|85833763|gb|EAQ51931.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|218322946|emb|CAV19123.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           splendidus LGP32]
          Length = 377

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFEFMQIAEECKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWIN 338


>gi|172054963|ref|YP_001806290.1| ribonucleoside-diphosphate reductase subunit beta [Cyanothece sp.
           ATCC 51142]
 gi|171701244|gb|ACB54224.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
          Length = 347

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 10/138 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATL-LEIAY 59
           + G A+  + I  DE  H++    +I + K +        + +   T L   T+  EI +
Sbjct: 209 LAGCAKLIKQINMDELTHVSLYQKLITEAKTKF------SYSEDEITELFVNTVEKEIEW 262

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKE 116
            +       +G++  S E Y +++AN R   IG+  ++   ENP+    W       K +
Sbjct: 263 TNHIFDGQILGVSEASTEAYTKYLANLRLKAIGISAIYPEVENPYAHLDWADFKGIGKSK 322

Query: 117 KNFFETRVTEYQQGAGLK 134
             FFET VT Y Q   +K
Sbjct: 323 AAFFETEVTGYAQPTAVK 340


>gi|323497713|ref|ZP_08102728.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
 gi|323317189|gb|EGA70185.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
          Length = 377

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWIN 338


>gi|148978906|ref|ZP_01815226.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
           bacterium SWAT-3]
 gi|145962104|gb|EDK27390.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
           bacterium SWAT-3]
          Length = 377

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFAFMQIAEECKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWIN 338


>gi|238785708|ref|ZP_04629683.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           bercovieri ATCC 43970]
 gi|238713393|gb|EEQ05430.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           bercovieri ATCC 43970]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E Q +   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQSQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRSNPIPWIN 337


>gi|326632980|ref|YP_004306569.1| putative aerobic ribonucleoside diphosphate reductase small subunit
           [Enterobacteria phage SPC35]
 gi|321272174|gb|ADW80066.1| putative aerobic ribonucleoside diphosphate reductase small subunit
           [Enterobacteria phage SPC35]
          Length = 381

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 4/114 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GIA+  Q I +DE+LH      +I  +  +       E   K+   L +    EI + H 
Sbjct: 227 GIAKNLQLIAKDEALHTQMSKAIIQIMFQQFDKDLVNEAVAKAPAQLLKTLKTEIEWGHF 286

Query: 63  TMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVID 112
               +  +GLNA   E+Y+ F+       IG++    L   T+NP PW+   +D
Sbjct: 287 IFKGRSLIGLNAELLEEYLYFVGRNAFMHIGVKWPSHLPVITKNPIPWIMNWLD 340


>gi|83814991|ref|YP_444284.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter
           ruber DSM 13855]
 gi|83756385|gb|ABC44498.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter
           ruber DSM 13855]
          Length = 324

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 4/131 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A   +   ++E +H  FG++++N I+ E+P  +   F+Q+ R    EA   E      
Sbjct: 183 GVANAVEATSKEEQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLDW 242

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKN 118
               G +  L  P  + +++   N     + ++P+F+          W  E + L K  +
Sbjct: 243 IFADGELDFLPRPVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEVLLTKGND 302

Query: 119 FFETRVTEYQQ 129
           FF  R T Y +
Sbjct: 303 FFSKRSTSYSK 313


>gi|238920521|ref|YP_002934036.1| ribonucleotide-diphosphate reductase subunit beta [Edwardsiella
           ictaluri 93-146]
 gi|238870090|gb|ACR69801.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Edwardsiella ictaluri 93-146]
          Length = 376

 Score = 44.7 bits (104), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E   +   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHILNLMRAGQDDPEMAEIATECASQCYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++
Sbjct: 285 KEWAGYLFRDGSMIGLNRDILCQYVEYITNIRMQAVGLPLPFETRSNPIPWIN 337


>gi|86140897|ref|ZP_01059456.1| ribonucleoside-diphosphate reductase, beta subunit 1
           [Leeuwenhoekiella blandensis MED217]
 gi|85832839|gb|EAQ51288.1| ribonucleoside-diphosphate reductase, beta subunit 1
           [Leeuwenhoekiella blandensis MED217]
          Length = 427

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 4/131 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E +H +FG+D+IN IK ENP  + +E     + M   +   E      
Sbjct: 286 GISNAVEATSKEEQIHGDFGVDIINIIKKENPEWFDEEHNNLIKEMCLNSFEAESKVVDW 345

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKN 118
              KG +  L      ++++   N+    IGLE LF   E       W  + I   K  +
Sbjct: 346 IFEKGELDFLPKAVINEFLKNRFNKSLEAIGLEKLFDIDEALLQETEWFDDEIIGTKHGD 405

Query: 119 FFETRVTEYQQ 129
           FF  R   Y +
Sbjct: 406 FFVKRSINYSK 416


>gi|157961884|ref|YP_001501918.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           pealeana ATCC 700345]
 gi|157846884|gb|ABV87383.1| Ribonucleoside-diphosphate reductase [Shewanella pealeana ATCC
           700345]
          Length = 376

 Score = 44.7 bits (104), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++  +    ++P +    KE +Q +  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFIKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +A      G  +GLN     QY+++I N R   +     +    NP PWM
Sbjct: 285 KEWAKYLFKDGSMIGLNETILCQYVEYITNERMKAVNFASPYAEQTNPLPWM 336


>gi|34419511|ref|NP_899524.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio
           phage KVP40]
 gi|34333192|gb|AAQ64347.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio
           phage KVP40]
          Length = 374

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE LHL     +I+  Q   ++P +   +   Q ++  +  +    E
Sbjct: 223 MEGNAKVMKLIARDEQLHLKGTQALISIWQNYKDDPEMAEISLRLQPEAEKIFMQVVDQE 282

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
             +AH    +G V GLNA    +Y++++A+ R   +GL   +   ++P PW+
Sbjct: 283 KEWAHSLFSQGTVPGLNAQILCEYVEYLADSRMRSVGLNSPYPRRKHPLPWI 334


>gi|297250515|ref|ZP_06864465.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           polysaccharea ATCC 43768]
 gi|296838835|gb|EFH22773.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           polysaccharea ATCC 43768]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|161353784|ref|NP_274308.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis MC58]
 gi|304387414|ref|ZP_07369605.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           meningitidis ATCC 13091]
 gi|304338507|gb|EFM04626.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           meningitidis ATCC 13091]
 gi|316984078|gb|EFV63056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Neisseria
           meningitidis H44/76]
 gi|325134468|gb|EGC57113.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M13399]
 gi|325140485|gb|EGC63006.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis CU385]
 gi|325144569|gb|EGC66868.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240013]
 gi|325200084|gb|ADY95539.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis H44/76]
 gi|325204292|gb|ADY99745.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240355]
 gi|325205936|gb|ADZ01389.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M04-240196]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|121730673|ref|ZP_01682814.1| ATP-dependent Zn proteases [Vibrio cholerae V52]
 gi|121627739|gb|EAX60372.1| ATP-dependent Zn proteases [Vibrio cholerae V52]
          Length = 129

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 38  TKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPL 96
            +E +Q+S  +  EA   E  +A      G  +GLN     QY+++I N R   +GLEP 
Sbjct: 18  AEECKQESFDLFKEAAEQEKEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPA 77

Query: 97  F-KYTENPFPWMS 108
           +   T NP PW++
Sbjct: 78  YPAATNNPIPWIN 90


>gi|319957101|ref|YP_004168364.1| ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
           16511]
 gi|319419505|gb|ADV46615.1| Ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
           16511]
          Length = 337

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 15/138 (10%)

Query: 3   GIAEQYQYIMRDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
           G  +  ++I RDE + HL    ++   I  EN          K+  M+ EA  +E+ Y  
Sbjct: 200 GARDMIKFIARDEINTHLPLFANIFKTIYKENK--IPASIVDKAYEMIQEAVDIELEYGK 257

Query: 62  ---ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID--LKK- 115
              E  P   +GL     E+ +   AN R ++IGLEP+F+  E P  ++ ++++  LK  
Sbjct: 258 YLLENYP--IMGLTDELMEKTVYNYANDRLNKIGLEPIFE--ETPQTYLQKLVEKHLKMN 313

Query: 116 --EKNFFETRVTEYQQGA 131
               NFFE+ V  Y + +
Sbjct: 314 DVRSNFFESNVANYAKNS 331


>gi|218768312|ref|YP_002342824.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis Z2491]
 gi|121052320|emb|CAM08650.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis Z2491]
 gi|261392428|emb|CAX49973.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase) [Neisseria meningitidis 8013]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|121635003|ref|YP_975248.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis FAM18]
 gi|120866709|emb|CAM10461.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis FAM18]
 gi|325128288|gb|EGC51172.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis N1568]
 gi|325130346|gb|EGC53112.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis OX99.30304]
 gi|325132508|gb|EGC55201.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M6190]
 gi|325136206|gb|EGC58814.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M0579]
 gi|325138282|gb|EGC60851.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis ES14902]
 gi|325142424|gb|EGC64828.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis 961-5945]
 gi|325198443|gb|ADY93899.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis G2136]
 gi|325201998|gb|ADY97452.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240149]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 338


>gi|132618|sp|P26713|RIR2_ASFM2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 44.3 bits (103), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---I 57
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L    I
Sbjct: 184 MPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFI 237

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
            YA +       G +     QY+++  +  C  +  + ++    NPFP M++    + EK
Sbjct: 238 NYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYN-VGNPFPQMTKFFLNEVEK 296

Query: 118 -NFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 297 TNFFELRPTQYQ 308


>gi|7226528|gb|AAF41664.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis MC58]
 gi|254670476|emb|CBA06168.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha153]
          Length = 384

 Score = 43.9 bits (102), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|149197800|ref|ZP_01874849.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
           araneosa HTCC2155]
 gi|149139021|gb|EDM27425.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
           araneosa HTCC2155]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 7/114 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE---NPHLW--TKEFQQKSRTMLHEATLL 55
           M G A+  + I RDE+LHL  G   + QI  E   +P +     E + +   +   A   
Sbjct: 225 MEGNAKIIKLIARDEALHLT-GTQQMIQIFREGKDDPEMAEIAAECEGQVYQIFSSAAEQ 283

Query: 56  EIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
           E  +A      G  +GLNA     Y+++I N R    G + +F  T+NP PWM+
Sbjct: 284 EKEWAKFLFRDGSMIGLNADILGDYVEYITNVRLKASGYKNVFPTTQNPLPWMN 337


>gi|161870162|ref|YP_001599332.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis 053442]
 gi|161595715|gb|ABX73375.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis 053442]
          Length = 384

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|319410557|emb|CBY90925.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase) [Neisseria meningitidis WUE 2594]
 gi|325208250|gb|ADZ03702.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis NZ-05/33]
          Length = 384

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|308389409|gb|ADO31729.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis alpha710]
          Length = 384

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|260768282|ref|ZP_05877216.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           furnissii CIP 102972]
 gi|260616312|gb|EEX41497.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           furnissii CIP 102972]
 gi|315179989|gb|ADT86903.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio furnissii
           NCTC 11218]
          Length = 377

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGMDDFEFLQIAEECKQECFDLFKQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL+  +   T NP PW++
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLDAAYPSATTNPIPWIN 338


>gi|254805092|ref|YP_003083313.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha14]
 gi|254668634|emb|CBA06257.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha14]
          Length = 384

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|325171172|ref|YP_004251147.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage
           ICP1]
 gi|323512567|gb|ADX88022.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage
           ICP1]
 gi|323513935|gb|ADX89384.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2001_A]
 gi|323514163|gb|ADX89611.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2004_A]
          Length = 450

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 8/118 (6%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIA 58
           +G+A   Q IM DE++H      +IN +      +W K F+      + ++      E++
Sbjct: 219 LGVASLVQKIMIDETIHTRMDEAIINILL--GDEVWLKTFEDIKPDIKEIVDSVYKQELS 276

Query: 59  YAHETMPKG--FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDL 113
           ++     +G   VGLN    ++++Q+ +     ++G+E P      NP PWM   +D+
Sbjct: 277 WSEYIFSEGRSIVGLNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDI 334


>gi|323512793|gb|ADX88247.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_D]
 gi|323513021|gb|ADX88474.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_C]
 gi|323513246|gb|ADX88698.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_B]
 gi|323513473|gb|ADX88924.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_A]
 gi|323513704|gb|ADX89154.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2005_A]
          Length = 450

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 8/118 (6%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIA 58
           +G+A   Q IM DE++H      +IN +      +W K F+      + ++      E++
Sbjct: 219 LGVASLVQKIMIDETIHTRMDEAIINILL--GDEVWLKTFEDIKPDIKEIVDSVYKQELS 276

Query: 59  YAHETMPKG--FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDL 113
           ++     +G   VGLN    ++++Q+ +     ++G+E P      NP PWM   +D+
Sbjct: 277 WSEYIFSEGRSIVGLNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDI 334


>gi|254672337|emb|CBA05511.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha275]
          Length = 345

 Score = 43.9 bits (102), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|163786628|ref|ZP_02181076.1| ribonucleoside-diphosphate reductase , beta subunit 1
           [Flavobacteriales bacterium ALC-1]
 gi|159878488|gb|EDP72544.1| ribonucleoside-diphosphate reductase , beta subunit 1
           [Flavobacteriales bacterium ALC-1]
          Length = 429

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 18/138 (13%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI----- 57
           G++   +   ++E++H +FGID+I  IK ENP  +  E  +  R +  EA   E      
Sbjct: 288 GVSNVVEATSKEENIHGDFGIDIIKIIKAENPTWFDAEHNEIVRELCREAFASESELVDW 347

Query: 58  ---AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVI 111
              A   E +PK  +        ++++   N     IG+E +F   E       W  + I
Sbjct: 348 IFEAGELEFLPKDVIN-------EFLKNRFNNSLESIGIEKVFDVDETLLTQTEWFDDEI 400

Query: 112 DLKKEKNFFETRVTEYQQ 129
              K  +FF  R   Y +
Sbjct: 401 IGTKHGDFFVKRSINYSK 418


>gi|48696741|ref|YP_024565.1| ORF20 [Ostreid herpesvirus 1]
 gi|81986458|sp|Q6R7K3|RIR2_OSHVF RecName: Full=Ribonucleoside-diphosphate reductase small chain
 gi|41352405|gb|AAS00912.1| ORF20 [Ostreid herpesvirus 1]
          Length = 579

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 64/124 (51%), Gaps = 13/124 (10%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
           ++I RDE+LH  F  +++ ++  + P        ++   +L EAT +E+ +A   +P+G 
Sbjct: 252 EFIRRDETLHFRFYAELL-RLMPDRPS------DERIAELLTEATEIELEFAEYVVPEGV 304

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKKEKNFFETR 123
             +      Q+++   N+ C  + + P++         +P  +M+  ++ +++ NFFE +
Sbjct: 305 KYITKDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMN-TLESEQKINFFEGK 363

Query: 124 VTEY 127
            TEY
Sbjct: 364 ATEY 367


>gi|237808189|ref|YP_002892629.1| ribonucleotide-diphosphate reductase subunit beta [Tolumonas
           auensis DSM 9187]
 gi|237500450|gb|ACQ93043.1| ribonucleotide reductase [Tolumonas auensis DSM 9187]
          Length = 377

 Score = 43.9 bits (102), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E   +   +  +A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHMLNILREGNDDPEMAEIARELHDECFALFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 108
             +A      G  +GLN     QY++FI N R   +GL   F    +NP PW++
Sbjct: 285 KEWASYLFKDGSMLGLNKDILCQYVEFITNVRMQGVGLPLAFDADRQNPLPWIN 338


>gi|327198722|emb|CCA61423.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
          Length = 395

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)

Query: 51  EATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSE 109
           E   + +AY      + F+ ++    +QY++FIAN+R   +  + P  + ++NP P    
Sbjct: 303 EDEFINLAYDEYADDEVFMNISKTKLKQYIRFIANKRMEAMRYDHPFPEASDNPLPEFEI 362

Query: 110 VIDLKKEKNFFETRVTEYQQ 129
           +I+     NFFE R T+Y +
Sbjct: 363 MINAPINTNFFENRSTDYAR 382


>gi|152991848|ref|YP_001357569.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
 gi|151423709|dbj|BAF71212.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
          Length = 337

 Score = 43.5 bits (101), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 69/134 (51%), Gaps = 7/134 (5%)

Query: 3   GIAEQYQYIMRDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
           G  +  ++I RDE + HL    ++   I+ EN ++ T       + M+ +A  +E+ Y H
Sbjct: 200 GARDMIKFIARDELNTHLPLFANIFKTIQKEN-NIATSTIDAAYK-MIQDAVKIELEYGH 257

Query: 62  ETMPK-GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF--PWMSEVIDLKKEK- 117
             + +   +G+     EQ +   AN R  +IGL+P+F  +   +    +++ +++ + K 
Sbjct: 258 YLLDQFPIMGVTHELMEQTVYNYANDRLKKIGLDPIFDESATTYLQKLVTKHLEMNEVKS 317

Query: 118 NFFETRVTEYQQGA 131
           NFFE+ V+ Y + +
Sbjct: 318 NFFESNVSNYAKSS 331


>gi|322515075|ref|ZP_08068083.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
 gi|322118955|gb|EFX91132.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
          Length = 326

 Score = 43.5 bits (101), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 8/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E +H  FGI +   ++ E+  L+T EF ++ +T+  +A   E      
Sbjct: 185 GISNAVEATSKEEEIHGKFGIALYEILRDEHSELFTPEFFEELKTLSTQAFEAECGILDW 244

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKE 116
              +G +  ++  + E Y++   N     +GLEP   Y  NP       W    I   KE
Sbjct: 245 IFEEGDLSFISREAVENYIRSRYNNSLMTLGLEP--PYDVNPELLKETEWFDIEILSTKE 302

Query: 117 KNFFETRVTEYQQ 129
            +FF  R T+Y +
Sbjct: 303 TDFFNKRSTDYSK 315


>gi|269862698|ref|XP_002650940.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220065381|gb|EED43116.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 332

 Score = 43.1 bits (100), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H +          ++ EA  +E  + 
Sbjct: 235 MPGLTFSNELISRDEGLHTDFACLL---------HKYINNKCTVIEDIVREAVAIEQEFL 285

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
            E++P   +G+N     QY++F+A+R    +G + ++  +  PF +M
Sbjct: 286 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-TPFDFM 331


>gi|325103985|ref|YP_004273639.1| ribonucleotide reductase [Pedobacter saltans DSM 12145]
 gi|324972833|gb|ADY51817.1| ribonucleotide reductase [Pedobacter saltans DSM 12145]
          Length = 324

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 14  DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 72
           DE LH N GI +IN+IK E P    +  +Q+   ++ E+  +E          G +  +N
Sbjct: 194 DEQLHANAGIYIINKIKEEFPEYIDEAVEQEIYDIVTESINIEDEILGWIFENGDLEHIN 253

Query: 73  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
                 +M++  +    QIG + L+  +E   +P  W  E I      +FF  R  EY +
Sbjct: 254 RRDLLNFMKYRIDVSLQQIGFKKLYNVSETEYSPMVWFEEEIFANSLDDFFAKRPVEYTK 313


>gi|116326775|ref|YP_803312.1| hypothetical protein TNAV2c_gp089 [Trichoplusia ni ascovirus 2c]
 gi|102231783|gb|ABF70606.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
          Length = 269

 Score = 43.1 bits (100), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 8/101 (7%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + N +  + P+        +   +L EA ++E  +  +
Sbjct: 162 GLTFSNELISRDEGLHTDFACLMYNYVVQKPPN-------SRVIEILKEAVVIEKDFLTD 214

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP 103
            +P   +G+N     QY++F+A+R  +++  E  +   +NP
Sbjct: 215 ALPVRLLGMNCDLMSQYIEFVADRLLYELIGEKYYN-AKNP 254


>gi|94676795|ref|YP_588829.1| ribonucleotide-diphosphate reductase subunit beta [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
 gi|94219945|gb|ABF14104.1| ribonucleoside-diphosphate reductase, beta subunit [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
          Length = 376

 Score = 42.7 bits (99), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +++  ++P +     E Q  S  +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLAGTQHMLNLMRLGKDDPEMADIALECQHDSYHLFLXAANQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R   + L+  F    NP PW++
Sbjct: 285 KDWASYLFRDGSMIGLNEEILCQYIEYITNIRMQAVLLDLPFATRSNPIPWIN 337


>gi|238897538|ref|YP_002923217.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229465295|gb|ACQ67069.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 376

 Score = 42.7 bits (99), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 1   MVGIAEQYQYIMRDESLHL---NFGIDVINQIKIENPHLW--TKEFQQKSRTMLHEATLL 55
           M G A+  + I RDE+LHL      +D++   K ++P +    +E QQ+   +   A   
Sbjct: 225 MEGNAKIIKLIARDEALHLMGTQHMLDLMRSGK-DDPEMADIAQECQQECSDLFLLAAQQ 283

Query: 56  EIAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
           E  +A      G  +GLN     QY++++ N R   + L+  F    NP PW++
Sbjct: 284 EKEWAAYLFRDGSMIGLNQDILCQYIEYMTNIRMQAVKLDAPFSIRTNPIPWIN 337


>gi|251792578|ref|YP_003007304.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter
           aphrophilus NJ8700]
 gi|247533971|gb|ACS97217.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           aphrophilus NJ8700]
          Length = 329

 Score = 42.7 bits (99), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E +H  FGI + + ++ E P L+T  F  + + +  +A   E    + 
Sbjct: 188 GISNAIEATSKEEEIHGRFGITLYSILREEQPELFTDAFFTELKELADQAFTAEKEILNW 247

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKE 116
               G +  L+  + E Y+    N     +GLEP   Y  NP       W    I   KE
Sbjct: 248 IFEDGELDFLSKATVENYIANRYNNSLQALGLEP--AYNINPEQLKETEWFDIEILSTKE 305

Query: 117 KNFFETRVTEYQQ 129
            +FF  R T+Y +
Sbjct: 306 TDFFNKRSTDYSK 318


>gi|261494146|ref|ZP_05990649.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261310312|gb|EEY11512.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 325

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 12/135 (8%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E +H  FGI +   ++ E+  L+T EF +  +T+ ++A   E      
Sbjct: 184 GISNAVEATSKEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDW 243

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEP-------LFKYTENPFPWMSEVIDLK 114
              +G +  +   + E Y++   N     +GLEP       L K TE    W    I   
Sbjct: 244 IFEEGDLSFITKATVENYIKNRYNNSLSILGLEPPHDIDPELLKETE----WFDIEILST 299

Query: 115 KEKNFFETRVTEYQQ 129
           KE +FF  R T+Y +
Sbjct: 300 KETDFFNKRSTDYSK 314


>gi|254362523|ref|ZP_04978626.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica PHL213]
 gi|153094123|gb|EDN75022.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica PHL213]
          Length = 293

 Score = 42.7 bits (99), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 12/135 (8%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E +H  FGI +   ++ E+  L+T EF +  +T+ ++A   E      
Sbjct: 152 GISNAVEATSKEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDW 211

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEP-------LFKYTENPFPWMSEVIDLK 114
              +G +  +   + E Y++   N     +GLEP       L K TE    W    I   
Sbjct: 212 IFEEGDLSFITKATVENYIKNRYNNSLSILGLEPPHDIDPELLKETE----WFDIEILST 267

Query: 115 KEKNFFETRVTEYQQ 129
           KE +FF  R T+Y +
Sbjct: 268 KETDFFNKRSTDYSK 282


>gi|53728876|ref|ZP_00348266.1| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207635|ref|YP_001052860.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae L20]
 gi|165975603|ref|YP_001651196.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|190149418|ref|YP_001967943.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303249851|ref|ZP_07336055.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|303251971|ref|ZP_07338142.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307247133|ref|ZP_07529185.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|307249355|ref|ZP_07531349.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|307251676|ref|ZP_07533581.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307253912|ref|ZP_07535764.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307256172|ref|ZP_07537959.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|307258366|ref|ZP_07540107.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|307260605|ref|ZP_07542297.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|307262736|ref|ZP_07544363.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
 gi|126096427|gb|ABN73255.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165875704|gb|ABY68752.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|189914549|gb|ACE60801.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649401|gb|EFL79586.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302651418|gb|EFL81570.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306856382|gb|EFM88533.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|306858649|gb|EFM90711.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|306860873|gb|EFM92881.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306863116|gb|EFM95058.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306865353|gb|EFM97249.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|306867550|gb|EFM99397.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306869682|gb|EFN01467.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|306871881|gb|EFN03598.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
          Length = 325

 Score = 42.4 bits (98), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 8/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E +H  FGI +   ++ E+  L+T EF +  +T+  +A   E      
Sbjct: 184 GISNAVEATSKEEEIHGKFGIALYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILDW 243

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKE 116
              +G +  ++    E Y++   N     +GLEP   Y  NP       W    I   KE
Sbjct: 244 IFEEGDLSFISREEVENYIRSRYNNSLMTLGLEP--PYDVNPELLKETEWFDIEILSTKE 301

Query: 117 KNFFETRVTEYQQ 129
            +FF  R T+Y +
Sbjct: 302 TDFFNKRSTDYSK 314


>gi|304373620|ref|YP_003858365.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16]
 gi|299829576|gb|ADJ55369.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16]
          Length = 391

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 5/114 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLWTKEFQ--QKSRTMLHEATLLE 56
           M G A+  + I RDE+LH       I   Q+  ++P +    FQ  +++  +  E    E
Sbjct: 237 MEGNAKIMRLIARDEALHQKGTQSKIRLWQMGKDDPEMAEIAFQYEEEATQIFLEVYEQE 296

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 109
             +A      G V G++  S   Y++ + ++R   +GL+  FK + NP+PWM++
Sbjct: 297 KEWAEHLFSIGDVDGVSLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNK 350


>gi|148653376|ref|YP_001280469.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           sp. PRwf-1]
 gi|148572460|gb|ABQ94519.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter sp. PRwf-1]
          Length = 377

 Score = 42.4 bits (98), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN +    ++P +   + +   +S  +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMINIMASGKDDPEMAEISAQCHNESIEIFRKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL  +F  ++ NP PW++
Sbjct: 285 KEWAGYLFKDGSMIGLNKDILCQYVEYITNLRMEAVGLPGIFPESKSNPIPWIN 338


>gi|294338336|emb|CBJ94375.1| Probable ribonucleotide reductase (small subunit) [Campylobacter
           phage CPt10]
          Length = 369

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 10/128 (7%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENP-----HLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           Q I RDE+LHL    ++I +I   +P     + W       +   L EA   E  +    
Sbjct: 222 QLICRDENLHLAITQNLI-KILSRSPEEGFINAWNSIKDNITDRYL-EAADQEFKWIDYL 279

Query: 64  MPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-F 120
             KG F+G+     + Y++++ N+R   IG + +F  + +NP PW+   I+  K +    
Sbjct: 280 FSKGAFLGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINYDKNEVLPQ 339

Query: 121 ETRVTEYQ 128
           E+ +T Y+
Sbjct: 340 ESEITNYK 347


>gi|294338139|emb|CBJ93977.1| Probable ribonucleotide reductase (small subunit) [Campylobacter
           phage CP220]
          Length = 369

 Score = 42.4 bits (98), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 10/128 (7%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENP-----HLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           Q I RDE+LHL    ++I +I   +P     + W       +   L EA   E  +    
Sbjct: 222 QLICRDENLHLAITQNLI-KILSRSPEEGFINAWNSIKDNITDRYL-EAADQEFKWIDYL 279

Query: 64  MPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKKEKNF-F 120
             KG F+G+     + Y++++ N+R   IG + +F  + +NP PW+   I+  K +    
Sbjct: 280 FSKGAFLGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINYDKNEVLPQ 339

Query: 121 ETRVTEYQ 128
           E+ +T Y+
Sbjct: 340 ESEITNYK 347


>gi|330971158|gb|EGH71224.1| hypothetical protein PSYAR_11719 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 25

 Score = 42.0 bits (97), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 17/20 (85%), Positives = 19/20 (95%)

Query: 102 NPFPWMSEVIDLKKEKNFFE 121
           NPFPWMSE+I LKKE+NFFE
Sbjct: 2   NPFPWMSEIIALKKERNFFE 21


>gi|21672460|ref|NP_660527.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
 gi|25091143|sp|Q8K9W4|RIR2_BUCAP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|21623075|gb|AAM67738.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
          Length = 376

 Score = 42.0 bits (97), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL    +    + N+   EN      E ++++  +   A+  E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHILNILNNEKNNENMKNTVLECREEAIKIFISASEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A      G  +GLN     QY+++I N R H IG +  F+ T NP PW++
Sbjct: 285 KKWAKYLFQDGSMLGLNKDILCQYIEYITNIRMHAIGFKMPFEKTSNPIPWIN 337


>gi|228926484|ref|ZP_04089556.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228833308|gb|EEM78873.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 322

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AYA E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYAEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|307244959|ref|ZP_07527056.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306854124|gb|EFM86332.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
          Length = 325

 Score = 42.0 bits (97), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 8/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E +H  FGI +   ++ E+  L+T EF +  +T+  +A   E      
Sbjct: 184 GISNAVEATSKEEEIHGKFGIVLYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILDW 243

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-----FPWMSEVIDLKKE 116
              +G +  ++    E Y++   N     +GLEP   Y  NP       W    I   KE
Sbjct: 244 IFEEGDLSFISREEVENYIRSRYNNSLMTLGLEP--PYDVNPELLKETEWFDIEILSTKE 301

Query: 117 KNFFETRVTEYQQ 129
            +FF  R T+Y +
Sbjct: 302 TDFFNKRSTDYSK 314


>gi|330004285|ref|ZP_08304843.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|328536657|gb|EGF62979.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 380

 Score = 41.6 bits (96), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 8/113 (7%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA---- 58
           G A+  + I RDE+LH      ++  ++     L  K+  ++    +++ T+L++A    
Sbjct: 229 GNAKIMRLIARDEALHCEGTERMLRNMRNGREGLLWKQIAEEEEPFVYQ-TMLDVAEQEM 287

Query: 59  -YAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS 108
            +A      G  +GLNA   +QY+++  N    ++ L PLF   T +P PWM+
Sbjct: 288 RWADYLFKDGSMIGLNAKILKQYVKYRTNLAMKRLHLNPLFDDVTFDPLPWMN 340


>gi|212712302|ref|ZP_03320430.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
           30120]
 gi|212685048|gb|EEB44576.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
           30120]
          Length = 380

 Score = 41.6 bits (96), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWTKEFQQKSRT--MLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     + +     +  +A   E
Sbjct: 229 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEEECYRLFVDAAEQE 288

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +A     +G  +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 289 KEWAEYLFSEGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWIN 341


>gi|157955336|gb|ABW06046.1| NrdF [Bacillus thuringiensis serovar kurstaki]
          Length = 322

 Score = 41.2 bits (95), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E + +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELSEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKNH-DFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|146329200|ref|YP_001209518.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus
           VCS1703A]
 gi|146232670|gb|ABQ13648.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus
           VCS1703A]
          Length = 325

 Score = 41.2 bits (95), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 4/131 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E +H  FGI + + IK E+P L+T  F    +T+  +A   E    + 
Sbjct: 184 GISNAVEATSKEEEIHGRFGIALYHIIKEEHPDLFTDSFYHHLKTLADQALAAERGILNW 243

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKN 118
               G +  L   + E Y+    N     +G+E  +   E       W    I   KE +
Sbjct: 244 IFENGDLPFLQQKTVENYIVNRYNNSLSVLGIESPYTVDEERLKETQWFDIEILSGKEND 303

Query: 119 FFETRVTEYQQ 129
           FF  R T+Y +
Sbjct: 304 FFYKRSTDYSK 314


>gi|296316020|ref|YP_003662484.1| ribonucleotide reductase subunit 2 [Bovine herpesvirus 5]
 gi|40456143|gb|AAR86121.1| UL40 ribonucleotide reductase small subunit [Bovine herpesvirus 5]
          Length = 315

 Score = 41.2 bits (95), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 15/122 (12%)

Query: 11  IMRDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 69
           I RDE++H      + N  +  E P         + R +  EA  +E  +     P+G  
Sbjct: 196 ISRDEAVHTTASCCIFNNYLGGERPP------PDRVRKLFREAVEIEREFIWSRAPRGSH 249

Query: 70  GLNAPSCEQYMQFIANRRCHQIGLEPLFKY----TENPFPWMSEVIDLKKEKNFFETRVT 125
            L+  +   Y+++ A+R    I L PLF      T+ P   M+     +K  NFFE R T
Sbjct: 250 ILDVEAISAYVEYSADRLLAAIHLPPLFGTPPPGTDFPLALMTA----EKHTNFFERRST 305

Query: 126 EY 127
            Y
Sbjct: 306 TY 307


>gi|307171465|gb|EFN63309.1| Ribonucleoside-diphosphate reductase subunit M2 [Camponotus
           floridanus]
          Length = 343

 Score = 41.2 bits (95), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 7/94 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I ++ P        ++ ++++ +A  +E  + 
Sbjct: 231 MPGLTFSNELISRDEGLHCDFACLMFKHI-VQKPSF------ERVKSIIMDAVEIEQEFL 283

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 94
            + +P   +G+N      Y++F+A+R    +G E
Sbjct: 284 TQALPVQLIGMNCTLMCSYIEFVADRLFVALGFE 317


>gi|261496013|ref|ZP_05992423.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261308263|gb|EEY09556.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. OVINE]
          Length = 325

 Score = 41.2 bits (95), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 12/135 (8%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E +H  FGI +   ++ E+  L+T EF +  +T+ ++A   E      
Sbjct: 184 GISNAVEATSKEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILDW 243

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEP-------LFKYTENPFPWMSEVIDLK 114
              +G +  +   + E Y++   N     +GLEP         K TE    W    I   
Sbjct: 244 IFEEGDLSFITKATVENYIKNRYNNSLSILGLEPPHDIDPEFLKETE----WFDIEILST 299

Query: 115 KEKNFFETRVTEYQQ 129
           KE +FF  R T+Y +
Sbjct: 300 KETDFFNKRSTDYSK 314


>gi|167856024|ref|ZP_02478769.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus
           parasuis 29755]
 gi|219871494|ref|YP_002475869.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           parasuis SH0165]
 gi|167852863|gb|EDS24132.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus
           parasuis 29755]
 gi|219691698|gb|ACL32921.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parasuis SH0165]
          Length = 325

 Score = 41.2 bits (95), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 12/135 (8%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E +H  FGI +   +  E+  L+T EF ++ +T+  +A   E      
Sbjct: 184 GISNAVEATSKEEEIHGRFGIALYEILSDEHSELFTPEFFEELKTLSQQAFEAERGILDW 243

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEP-------LFKYTENPFPWMSEVIDLK 114
              +G +  ++  + E Y+    N     +GLEP       L K TE    W    I   
Sbjct: 244 IFEEGDLSFISRKTVENYIMNRYNNSLSILGLEPPYDVDPELLKETE----WFDIEIIST 299

Query: 115 KEKNFFETRVTEYQQ 129
           KE +FF  R T+Y +
Sbjct: 300 KETDFFNKRSTDYSK 314


>gi|261885428|ref|ZP_06009467.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           fetus subsp. venerealis str. Azul-94]
          Length = 282

 Score = 41.2 bits (95), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 38/78 (48%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T E + K   M  +A  LEI + 
Sbjct: 205 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWG 264

Query: 61  HETMPKGFVGLNAPSCEQ 78
                   +G      E+
Sbjct: 265 KYITGNQIMGFTDDIIEE 282


>gi|38638230|ref|NP_944413.1| ribonucleotide reductase subunit 2 [Psittacid herpesvirus 1]
 gi|81987371|sp|Q6UDJ1|RIR2_PSHV1 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|34500236|gb|AAQ73719.1| unknown [Psittacid herpesvirus 1]
          Length = 313

 Score = 40.8 bits (94), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 10/121 (8%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE++H      + N     +P    K   Q    +  EA  +E  +     PK    
Sbjct: 193 ISRDETIHTTASCCIYNNWLKGHPKPSVKRIHQ----LFKEAVEIECDFLVARAPKAARL 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEKNFFETRVTEY 127
           ++  + + +++F ANR    IG+  ++   ++P P   +   ++ L+K  NFFE R T Y
Sbjct: 249 IDIDAIQSFVRFTANRWLSMIGVPTIY---DDPAPDPTFPLALMSLEKNVNFFEHRSTAY 305

Query: 128 Q 128
            
Sbjct: 306 S 306


>gi|255683173|ref|YP_003084381.1| UL40 [Duck enteritis virus]
 gi|158343199|gb|ABW35292.1| ribonucleotide reductase subunit 2 [Anatid herpesvirus 1]
 gi|208401182|gb|ACI26683.1| UL40 [Anatid herpesvirus 1]
 gi|254839988|gb|ACT83534.1| UL40 [Anatid herpesvirus 1]
          Length = 355

 Score = 40.8 bits (94), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 8/119 (6%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
           I RDE++H      + N+      HL  + K    +   +  EA  LE  +     P   
Sbjct: 235 ISRDETIHTKASCVIYNK------HLQKYKKPSTCRIYKLFSEAVKLECEFLRARAPSDS 288

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 127
             ++  +   Y++F A+R    IGL PLF        +    +   ++ NFFE R T Y
Sbjct: 289 AIIDTEAICSYVRFNADRLLSDIGLAPLFDEPPPKHDFPLAFMATSQQTNFFERRNTTY 347


>gi|66391516|ref|YP_239041.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43]
 gi|62288604|gb|AAX78587.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43]
          Length = 391

 Score = 40.8 bits (94), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 5/114 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LH       I   Q+  ++P +     ++++++  +  E    E
Sbjct: 237 MEGNAKIMRLIARDEALHQKGTQSKIRLWQMGKDDPEMAEIAYQYEEEATQIFLEVYEQE 296

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 109
             +A      G V G+   S   Y++ + ++R   +GL+  FK + NP+PWM++
Sbjct: 297 KEWAEHLFSIGDVDGVTLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNK 350


>gi|302321458|gb|ADL16651.1| RNR2 [Abalone herpesvirus Victoria/AUS/2007]
          Length = 642

 Score = 40.8 bits (94), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 14/131 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           + E  Q +  DE+LH +F   + N +         +   +K + ++ +A  +EIA+A   
Sbjct: 239 LIEGNQSVRNDETLHGSFYAALHNIMP-------DRASPEKVKEIIVKAVEIEIAFAMSI 291

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTE----NPFPWMSEVIDLKKEK 117
           + +    +N  S + +++  AN  C  +G+EP++  ++T+    +P  +M+    L+K  
Sbjct: 292 VTEDLEHINPSSMQLHIKATANLCCEFLGVEPIYFDRWTKLPVVSPLSYMNNYETLQK-F 350

Query: 118 NFFETRVTEYQ 128
           NFFE R  +Y 
Sbjct: 351 NFFEVRNMDYS 361


>gi|218233288|ref|YP_002366135.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           B4264]
 gi|229149653|ref|ZP_04277884.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1550]
 gi|157955328|gb|ABW06040.1| NrdF [Bacillus thuringiensis serovar entomocidus]
 gi|157955388|gb|ABW06085.1| NrdF [Bacillus thuringiensis serovar subtoxicus]
 gi|157955409|gb|ABW06101.1| NrdF [Bacillus cereus]
 gi|218161245|gb|ACK61237.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           B4264]
 gi|228633863|gb|EEK90461.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1550]
          Length = 322

 Score = 40.8 bits (94), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQDLLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|229189534|ref|ZP_04316550.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 10876]
 gi|228593979|gb|EEK51782.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 10876]
          Length = 322

 Score = 40.8 bits (94), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAKEQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|148688624|gb|EDL20571.1| mCG140327 [Mus musculus]
          Length = 65

 Score = 40.8 bits (94), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 2/49 (4%)

Query: 81  QFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           +F+A+    ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+
Sbjct: 1   EFVADMLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQR 47


>gi|228990454|ref|ZP_04150419.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           pseudomycoides DSM 12442]
 gi|228996556|ref|ZP_04156195.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock3-17]
 gi|229004206|ref|ZP_04162007.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock1-4]
 gi|228757067|gb|EEM06311.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock1-4]
 gi|228763188|gb|EEM12096.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock3-17]
 gi|228768980|gb|EEM17578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           pseudomycoides DSM 12442]
          Length = 322

 Score = 40.4 bits (93), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAEFSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPRFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|228907084|ref|ZP_04070948.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 200]
 gi|157955401|gb|ABW06095.1| NrdF [Bacillus thuringiensis serovar toumanoffi]
 gi|228852588|gb|EEM97378.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 200]
          Length = 322

 Score = 40.4 bits (93), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|242012701|ref|XP_002427066.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
           [Pediculus humanus corporis]
 gi|212511324|gb|EEB14328.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
           [Pediculus humanus corporis]
          Length = 304

 Score = 40.4 bits (93), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 21/96 (21%), Positives = 48/96 (50%), Gaps = 7/96 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   + ++ P       + +   ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFKYV-VQKPT------EDEICDIIKDAVAIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPL 96
            E +P   +G+N    ++Y++F+A+R   ++G + +
Sbjct: 267 TEALPVNLIGMNCSLMKKYIEFVADRLLVELGCKKV 302


>gi|295134784|ref|YP_003585460.1| ribonucleotide reductase [Zunongwangia profunda SM-A87]
 gi|294982799|gb|ADF53264.1| ribonucleotide reductase [Zunongwangia profunda SM-A87]
          Length = 324

 Score = 40.4 bits (93), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 12/124 (9%)

Query: 14  DESLHLNFGIDVINQIKIENPHLWTKEFQQK-----SRTMLHEATLLEIAYAHETMPKGF 68
           DE +H N GI +INQI+ E P  + +E  +K     +R++  E  +L+  + +  +    
Sbjct: 194 DEQIHANAGIYIINQIREEYPDYFNEEMTRKLTDVVTRSIEVEEEILDWIFENGQLE--- 250

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVT 125
             +N  +   +M+F  +     IGL   +  T     P  W  E +      +FF  R  
Sbjct: 251 -NINKKNLMDFMKFRLDDSLKSIGLPKQYNITAAEYQPMLWFEEEVFANSLDDFFARRPV 309

Query: 126 EYQQ 129
           +Y +
Sbjct: 310 DYTK 313


>gi|75759355|ref|ZP_00739452.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218896385|ref|YP_002444796.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9842]
 gi|228900033|ref|ZP_04064269.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
 gi|228920164|ref|ZP_04083513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228964415|ref|ZP_04125529.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|74493187|gb|EAO56306.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|157955348|gb|ABW06055.1| NrdF [Bacillus thuringiensis serovar alesti]
 gi|157955356|gb|ABW06061.1| NrdF [Bacillus thuringiensis serovar dakota]
 gi|157955360|gb|ABW06064.1| NrdF [Bacillus thuringiensis serovar darmstadiensis]
 gi|157955364|gb|ABW06067.1| NrdF [Bacillus thuringiensis serovar dendrolimus]
 gi|157955380|gb|ABW06079.1| NrdF [Bacillus thuringiensis serovar ostriniae]
 gi|218545942|gb|ACK98336.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9842]
 gi|228795272|gb|EEM42764.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228839620|gb|EEM84912.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228859647|gb|EEN04071.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
          Length = 322

 Score = 40.4 bits (93), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|30019505|ref|NP_831136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           ATCC 14579]
 gi|229043194|ref|ZP_04190917.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH676]
 gi|229078637|ref|ZP_04211194.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock4-2]
 gi|229108909|ref|ZP_04238513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-15]
 gi|229126769|ref|ZP_04255781.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-Cer4]
 gi|229144056|ref|ZP_04272472.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST24]
 gi|296502033|ref|YP_003663733.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis BMB171]
 gi|29895049|gb|AAP08337.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 14579]
 gi|157955310|gb|ABW06026.1| NrdF [Bacillus thuringiensis serovar canadensis]
 gi|157955392|gb|ABW06088.1| NrdF [Bacillus thuringiensis serovar thompsoni]
 gi|157955396|gb|ABW06091.1| NrdF [Bacillus thuringiensis serovar tohokuensis]
 gi|228639453|gb|EEK95867.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST24]
 gi|228656709|gb|EEL12535.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-Cer4]
 gi|228674565|gb|EEL29805.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-15]
 gi|228704707|gb|EEL57136.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock4-2]
 gi|228726156|gb|EEL77390.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH676]
 gi|296323085|gb|ADH06013.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis BMB171]
          Length = 322

 Score = 40.4 bits (93), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|229057079|ref|ZP_04196471.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH603]
 gi|228720220|gb|EEL71799.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH603]
          Length = 322

 Score = 40.4 bits (93), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q +++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFTELSAKEQQEVQTETQELLMELYEIELAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|311977695|ref|YP_003986815.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
           polyphaga mimivirus]
 gi|77416594|sp|Q7T6Y9|RIR2_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|55664859|gb|AAQ09571.2| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
           mimivirus]
 gi|308204332|gb|ADO18133.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
           polyphaga mimivirus]
          Length = 417

 Score = 40.4 bits (93), Expect = 0.078,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           ++++P   +G+N+    QY++++A+R    +G    F   +NPF +M + ID+  + NFF
Sbjct: 336 NDSLPCKLLGMNSELMSQYIKYVADRLLVDLGYRKKFN-VDNPFEYMKK-IDVFVKANFF 393

Query: 121 ETRVTEYQQG 130
           E R   Y   
Sbjct: 394 EKRNDAYSNA 403


>gi|157955376|gb|ABW06076.1| NrdF [Bacillus thuringiensis serovar morrisoni]
          Length = 322

 Score = 40.4 bits (93), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|228938567|ref|ZP_04101175.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228971446|ref|ZP_04132072.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228978059|ref|ZP_04138438.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis Bt407]
 gi|157955340|gb|ABW06049.1| NrdF [Bacillus thuringiensis serovar thuringiensis]
 gi|157955368|gb|ABW06070.1| NrdF [Bacillus thuringiensis serovar galechiae]
 gi|157955384|gb|ABW06082.1| NrdF [Bacillus thuringiensis serovar sotto]
 gi|228781720|gb|EEM29919.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis Bt407]
 gi|228788313|gb|EEM36266.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228821165|gb|EEM67182.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326939076|gb|AEA14972.1| ribonucleotide-diphosphate reductase [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 322

 Score = 40.4 bits (93), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|229177859|ref|ZP_04305232.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           172560W]
 gi|228605650|gb|EEK63098.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           172560W]
          Length = 322

 Score = 40.4 bits (93), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKNH-DFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|294661479|ref|YP_003579932.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15]
 gi|292660640|gb|ADE34888.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15]
          Length = 402

 Score = 40.4 bits (93), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 15/119 (12%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLWTKEFQQKSRTMLHEATLL--- 55
           M G A+  + I RDE+LH       I   Q+  ++P     E  + SR +  EAT +   
Sbjct: 248 MEGNAKIMRLIARDEALHQKGTQSKIRLWQMGKDDP-----EMVEISRRLKKEATAIFLE 302

Query: 56  ----EIAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE 109
               E  +A      G V G++  S   Y++ + ++R   +GL+  F    NP+PWM++
Sbjct: 303 VYEQEKEWAEHLFSVGDVEGVSLKSTIAYIEHLTDQRMRAVGLDSPFTPIPNPYPWMNK 361


>gi|157955319|gb|ABW06033.1| NrdF [Bacillus thuringiensis serovar pakistani]
          Length = 322

 Score = 40.4 bits (93), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|229084444|ref|ZP_04216723.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-44]
 gi|228698872|gb|EEL51578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-44]
          Length = 322

 Score = 40.4 bits (93), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTDEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEEVNRFVRYNANKGLMNLGLEPRFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|163939261|ref|YP_001644145.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           weihenstephanensis KBAB4]
 gi|229010750|ref|ZP_04167947.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           DSM 2048]
 gi|229132251|ref|ZP_04261107.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST196]
 gi|229166287|ref|ZP_04294046.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH621]
 gi|163861458|gb|ABY42517.1| Ribonucleoside-diphosphate reductase [Bacillus weihenstephanensis
           KBAB4]
 gi|228617232|gb|EEK74298.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH621]
 gi|228651189|gb|EEL07168.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST196]
 gi|228750424|gb|EEM00253.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           DSM 2048]
          Length = 322

 Score = 40.4 bits (93), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q +++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFTELSAEEQQEVQTETQELLMELYEIELAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|42780545|ref|NP_977792.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           ATCC 10987]
 gi|42736465|gb|AAS40400.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           ATCC 10987]
          Length = 322

 Score = 40.0 bits (92), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|47566242|ref|ZP_00237270.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9241]
 gi|47556795|gb|EAL15126.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9241]
          Length = 322

 Score = 40.0 bits (92), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKNH-DFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|52143985|ref|YP_082843.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           E33L]
 gi|228984529|ref|ZP_04144706.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229155020|ref|ZP_04283134.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 4342]
 gi|51977454|gb|AAU19004.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           E33L]
 gi|157955324|gb|ABW06037.1| NrdF [Bacillus thuringiensis serovar tochigiensis]
 gi|228628578|gb|EEK85291.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 4342]
 gi|228775232|gb|EEM23621.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 322

 Score = 40.0 bits (92), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKNH-DFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|32709431|gb|AAP86734.1| NrdB [Enterobacteria phage T2H]
          Length = 392

 Score = 40.0 bits (92), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWT---KEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q+++  +   W    KE +Q++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQLGTDGDEWVKIAKECEQEAVDIFMEVNRQE 296

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G V GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 297 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|228861159|ref|YP_002854182.1| ribonucleotide reductase B subunit [Enterobacteria phage RB51]
 gi|227438833|gb|ACP31145.1| ribonucleotide reductase B subunit [Enterobacteria phage RB51]
          Length = 392

 Score = 40.0 bits (92), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWT---KEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q+++  +   W    KE +Q++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQLGTDGDEWVKIAKECEQEAVDIFMEVNRQE 296

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G V GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 297 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|30261453|ref|NP_843830.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Ames]
 gi|47526645|ref|YP_017994.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49184287|ref|YP_027539.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Sterne]
 gi|49477196|ref|YP_035577.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|65318723|ref|ZP_00391682.1| COG0208: Ribonucleotide reductase, beta subunit [Bacillus anthracis
           str. A2012]
 gi|118476922|ref|YP_894073.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis str. Al Hakam]
 gi|165870361|ref|ZP_02215016.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0488]
 gi|167634337|ref|ZP_02392658.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0442]
 gi|167639338|ref|ZP_02397610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0193]
 gi|170686782|ref|ZP_02878002.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0465]
 gi|170706310|ref|ZP_02896771.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0389]
 gi|177651561|ref|ZP_02934350.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0174]
 gi|190568085|ref|ZP_03020995.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|196035278|ref|ZP_03102683.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           W]
 gi|196046555|ref|ZP_03113780.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB108]
 gi|218902561|ref|YP_002450395.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH820]
 gi|225863317|ref|YP_002748695.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB102]
 gi|227815798|ref|YP_002815807.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|228914025|ref|ZP_04077647.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228932735|ref|ZP_04095607.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228945050|ref|ZP_04107411.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229090407|ref|ZP_04221650.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-42]
 gi|229120993|ref|ZP_04250235.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           95/8201]
 gi|229183646|ref|ZP_04310869.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BGSC 6E1]
 gi|229602752|ref|YP_002865867.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0248]
 gi|254682483|ref|ZP_05146344.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. CNEVA-9066]
 gi|254726146|ref|ZP_05187928.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. A1055]
 gi|254733899|ref|ZP_05191613.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Western North America USA6153]
 gi|254740411|ref|ZP_05198102.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Kruger B]
 gi|254753802|ref|ZP_05205837.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Vollum]
 gi|254758897|ref|ZP_05210924.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Australia 94]
 gi|301052993|ref|YP_003791204.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis CI]
 gi|30255307|gb|AAP25316.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. Ames]
 gi|47501793|gb|AAT30469.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49178214|gb|AAT53590.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. Sterne]
 gi|49328752|gb|AAT59398.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|72414680|emb|CAG28950.1| ribonucleoside-diphosphate reductase class Ib beta chain [Bacillus
           anthracis]
 gi|118416147|gb|ABK84566.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bacillus thuringiensis str. Al Hakam]
 gi|157955314|gb|ABW06029.1| NrdF [Bacillus thuringiensis serovar finitimus]
 gi|164713856|gb|EDR19378.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0488]
 gi|167512777|gb|EDR88151.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0193]
 gi|167530225|gb|EDR92951.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0442]
 gi|170128844|gb|EDS97710.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0389]
 gi|170669305|gb|EDT20048.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0465]
 gi|172082839|gb|EDT67902.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0174]
 gi|190560819|gb|EDV14794.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|195991955|gb|EDX55918.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           W]
 gi|196022739|gb|EDX61421.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB108]
 gi|218537212|gb|ACK89610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH820]
 gi|225785957|gb|ACO26174.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB102]
 gi|227004217|gb|ACP13960.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|228599889|gb|EEK57486.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BGSC 6E1]
 gi|228662653|gb|EEL18251.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           95/8201]
 gi|228692990|gb|EEL46708.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-42]
 gi|228814719|gb|EEM60979.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228826940|gb|EEM72702.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228845630|gb|EEM90659.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229267160|gb|ACQ48797.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0248]
 gi|300375162|gb|ADK04066.1| ribonucleotide-diphosphate reductase beta subunit [Bacillus cereus
           biovar anthracis str. CI]
 gi|324325470|gb|ADY20730.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 322

 Score = 40.0 bits (92), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|229102053|ref|ZP_04232765.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-28]
 gi|228681373|gb|EEL35538.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-28]
          Length = 322

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQVLLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y +
Sbjct: 249 L-VDDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKNH-DFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|149369595|ref|ZP_01889447.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified
           eubacterium SCB49]
 gi|149357022|gb|EDM45577.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified
           eubacterium SCB49]
          Length = 424

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 4/131 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G++   +   ++E +H +FGID+I  +K E+P  +T E+ +  + +  +A   E+     
Sbjct: 283 GVSNVVEATSKEEQIHGDFGIDLILILKDEHPEWFTPEYHENIKRLCLDAYEAEVDLVDW 342

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKN 118
              +G +  L      ++++   N+    IG+E +F   E       W  + I   K  +
Sbjct: 343 IFEEGELDFLPKTVINEFLKNRFNKSLESIGVEKVFDVDEALVIQTEWFDDEIIGTKHGD 402

Query: 119 FFETRVTEYQQ 129
           FF  R   Y +
Sbjct: 403 FFVKRSVNYSK 413


>gi|330858746|ref|YP_004415121.1| putative ribonucleotide reductase B subunit [Shigella phage Shfl2]
 gi|327397680|gb|AEA73182.1| putative ribonucleotide reductase B subunit [Shigella phage Shfl2]
          Length = 389

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q+++  +   W K   E +Q++  +  E    E
Sbjct: 234 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQE 293

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G V GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 294 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 352


>gi|157955305|gb|ABW06022.1| NrdF [Bacillus thuringiensis serovar aizawai]
 gi|157955352|gb|ABW06058.1| NrdF [Bacillus thuringiensis serovar colmeri]
 gi|157955372|gb|ABW06073.1| NrdF [Bacillus thuringiensis serovar indiana]
 gi|157955405|gb|ABW06098.1| NrdF [Bacillus thuringiensis serovar wuhanensis]
          Length = 322

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|82503214|ref|YP_401656.1| BaRF1 [Human herpesvirus 4]
 gi|139424488|ref|YP_001129453.1| BaRF1 [Human herpesvirus 4 type 2]
 gi|238055355|sp|P0CAP6|RIR2_EBVB9 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|238055356|sp|P0CAP7|RIR2_EBVA8 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|238055357|sp|P0C701|RIR2_EBVG RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1334857|emb|CAA24843.1| unnamed protein product [Human herpesvirus 4]
 gi|23893602|emb|CAD53406.1| ribonucleoside-diphosphate reductase small chain [Human herpesvirus
           4]
 gi|64173256|gb|AAY41106.1| unknown [Human herpesvirus 4]
 gi|82703964|gb|ABB89233.1| BaRF1 [Human herpesvirus 4]
          Length = 302

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 18/133 (13%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPH-LWTKEFQQKSRTMLHEATLLEI 57
           M GI     YI RDE LH      + N +  K + P   W +E       +   A  +E 
Sbjct: 174 MPGICLANNYISRDELLHTRAASLLYNSMTAKADRPRATWIQE-------LFRTAVEVET 226

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLK 114
           A+  E   +G   ++  + +Q+++  A+R    IG  PL+      + P  +M+ +    
Sbjct: 227 AFI-EARGEGVTLVDVRAIKQFLEATADRILGDIGQAPLYGTPPPKDCPLTYMTSI---- 281

Query: 115 KEKNFFETRVTEY 127
           K+ NFFE   ++Y
Sbjct: 282 KQTNFFEQESSDY 294


>gi|157955332|gb|ABW06043.1| NrdF [Bacillus thuringiensis serovar galleriae]
 gi|157955344|gb|ABW06052.1| NrdF [Bacillus thuringiensis serovar tolworthi]
          Length = 322

 Score = 39.7 bits (91), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|152974880|ref|YP_001374397.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152023632|gb|ABS21402.1| Ribonucleoside-diphosphate reductase [Bacillus cytotoxicus NVH
           391-98]
          Length = 322

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 7/126 (5%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFV 69
           I+RDES+H  F   +  QI  E      ++ Q++++ +L E   +E AY  E     G V
Sbjct: 191 IIRDESIHGVFVGLLAQQIFAELSAEEQEDVQKETQDLLMELYEIETAYTEEIYASIGLV 250

Query: 70  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           G       +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y 
Sbjct: 251 G----EVNRFVRYNANKGLMNLGLEPRFEEEEINPIVLNGLRTDTKNH-DFFSVKGNGYV 305

Query: 129 QGAGLK 134
           +   ++
Sbjct: 306 KATNVE 311


>gi|417659|sp|P32209|RIR2_SWPVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|347472|gb|AAC37857.1| ribonucleotide reductase [Swinepox virus]
          Length = 274

 Score = 39.7 bits (91), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 7/94 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++   +++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSKEVITSIIIDAVNIEKEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 94
              +P   +G+N     QY++F+A+R   ++G E
Sbjct: 236 TVAIPVDLIGMNCCLMSQYIEFVADRLLTELGCE 269


>gi|229029125|ref|ZP_04185222.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH1271]
 gi|228732183|gb|EEL83068.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH1271]
          Length = 322

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQLFTELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D  K  +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTD-TKNHDFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|45478633|ref|NP_995489.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|52788092|ref|YP_093920.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis]
 gi|145597234|ref|YP_001154698.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|162417832|ref|YP_001604568.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|229896974|ref|ZP_04512133.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia pestis Pestoides A]
 gi|45357286|gb|AAS58680.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Yersinia pestis biovar Microtus str. 91001]
 gi|52538021|emb|CAG27446.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Yersinia pestis]
 gi|145213002|gb|ABP42407.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Pestoides F]
 gi|162350804|gb|ABX84753.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|229700010|gb|EEO88050.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia pestis Pestoides A]
          Length = 380

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 55/108 (50%), Gaps = 8/108 (7%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA-----YAHET 63
           ++I RDE+LH      +I  ++     L  K    +  + +++ T++++A     +A   
Sbjct: 235 RFIARDEALHCEGTERMIRFMRTGREGLMWKMIAAEEESFIYQ-TMMDVAGQEMRWADYL 293

Query: 64  MPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSE 109
              G  +GLNA   + Y+++  N    ++GL PLF +  ++P  WM++
Sbjct: 294 FKDGSMIGLNADILKSYVKYRTNLAMRRLGLRPLFPEIKDDPLVWMNK 341


>gi|161622513|ref|YP_001595352.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           JS98]
 gi|160213819|gb|ABX11158.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           JS98]
          Length = 379

 Score = 39.7 bits (91), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q+++  +   W K   E +Q++  +  E    E
Sbjct: 224 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQE 283

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  +   ++ ++   R  Q GL  P+    T +P+PW+ E ++
Sbjct: 284 KEWAAHLFKDGTCPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 342


>gi|299779174|ref|YP_003734368.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           IME08]
 gi|298105903|gb|ADI55547.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           IME08]
          Length = 389

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q+++  +   W K   E +Q++  +  E    E
Sbjct: 234 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQE 293

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  +   ++ ++   R  Q GL  P+    T +P+PW+ E ++
Sbjct: 294 KEWATHLFKDGTCPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 352


>gi|229095937|ref|ZP_04226913.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-29]
 gi|229114891|ref|ZP_04244304.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-3]
 gi|228668583|gb|EEL24012.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-3]
 gi|228687447|gb|EEL41349.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-29]
          Length = 322

 Score = 39.3 bits (90), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y +
Sbjct: 249 L-VDDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKNH-DFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|284504289|ref|YP_003407004.1| ribonucleotide reductase small chain [Marseillevirus]
 gi|282935727|gb|ADB04042.1| ribonucleotide reductase small chain [Marseillevirus]
          Length = 280

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 3/128 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+ +  ++I +DE+LH  F   V   I ++    + +  Q++ + +L  A      + H+
Sbjct: 143 GLRKANEWISKDEALHQRFAEAVYRYI-VDVIKAFPRVSQERVQEILGSAIDAVSPFIHD 201

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +    V ++A     YM+  A+     +G E  F  +++   +M  +I +  + NFFE 
Sbjct: 202 CLRFKNVNIDAERMIGYMKNAADGLAFSLGYEKFFN-SDSSLDYML-LIGMDNKTNFFEE 259

Query: 123 RVTEYQQG 130
            V +Y +G
Sbjct: 260 VVADYAKG 267


>gi|312130784|ref|YP_003998124.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132]
 gi|311907330|gb|ADQ17771.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132]
          Length = 324

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 14  DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 72
           DE +H N GI ++N I+ E P  +  E   +    + E+  +E         +G +  + 
Sbjct: 194 DEQIHANGGIYIVNTIRDEFPDFFDPETITQIEDTVRESIEVEERILDWIFSEGEIEIIK 253

Query: 73  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
                 +M+F  +    +IG  PLF  +     P  W  E +      +FF  R  +Y +
Sbjct: 254 KKDLLNFMKFRIDDSMKKIGFSPLFHVSSADYQPIAWFEEEVFANSLDDFFAKRPVDYTK 313


>gi|238695377|ref|YP_002922570.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           JS10]
 gi|220029513|gb|ACL78447.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           JS10]
          Length = 379

 Score = 39.3 bits (90), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q+++  +   W K   E +Q++  +  E    E
Sbjct: 224 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQE 283

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  +   ++ ++   R  Q GL  P+    T +P+PW+ E ++
Sbjct: 284 KEWAGHLFKDGTCPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 342


>gi|124487872|gb|ABN12019.1| putative ribonucleotide reductase R2 subunit [Maconellicoccus
           hirsutus]
          Length = 249

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/107 (20%), Positives = 53/107 (49%), Gaps = 8/107 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I + ESL+ +F   +  ++ ++ P +      ++   ++ EA ++E  ++
Sbjct: 113 MPGLTLSNELIRKGESLYTDFACLLFKRL-VQRPSV------EEITEIIREAVIIEQEFS 165

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM 107
            + +P   +G++      Y++F+A+R    +    +F    NPF +M
Sbjct: 166 TKGLPVSLIGMDCELMTTYIEFVADRLLQALNCPKVFG-VPNPFGFM 211


>gi|229160405|ref|ZP_04288403.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           R309803]
 gi|228623129|gb|EEK79957.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           R309803]
          Length = 322

 Score = 39.3 bits (90), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 5/125 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I+RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E      +G
Sbjct: 191 IIRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IG 248

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           L      +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y +
Sbjct: 249 L-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKNH-DFFSVKGNGYVK 306

Query: 130 GAGLK 134
              ++
Sbjct: 307 ATNVE 311


>gi|30984468|ref|NP_851900.1| ribonucleotide reductase subunit 2 [Macacine herpesvirus 1]
 gi|28804676|dbj|BAC58080.1| ribonucleotide reductase small subunit [Cercopithecine herpesvirus
           1]
 gi|30844282|gb|AAP41458.1| small subunit of ribonucleotide reductase [Macacine herpesvirus 1]
          Length = 338

 Score = 39.3 bits (90), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 11/122 (9%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
           I RDE++H            I N +L    K   ++   +  EA  +EI +     P   
Sbjct: 215 ISRDEAVH------TTASCYIYNNYLGGHRKPTAERVYRLFREAVDIEIGFIRSQAPANS 268

Query: 69  VGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVT 125
             L+A +    E Y++F A+R    I ++PLF        +   ++  +K  NFFE R T
Sbjct: 269 RVLDAAALDAIENYVRFSADRLLVLIKMKPLFGAPAPAPSFPLSLMSTEKHTNFFECRST 328

Query: 126 EY 127
            Y
Sbjct: 329 AY 330


>gi|32709423|gb|AAP86730.1| NrdB [Enterobacteria phage RB27]
          Length = 392

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++   +   W K   E +Q++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQE 296

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G V GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 297 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|51518029|ref|YP_067954.1| BaRF1 [Macacine herpesvirus 4]
 gi|18025480|gb|AAK95424.1| BaRF1 [Macacine herpesvirus 4]
          Length = 302

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 12/130 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+     YI RDE LH      + N +         +  Q+  RT    A  +E A+ 
Sbjct: 174 MPGVCLANNYISRDELLHTRAASLLYNSMTAPADRPGAQWIQELFRT----AVEVETAFI 229

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEK 117
            E    G   ++  +  Q+++  A+R    IGL PL+      + P  +M+ +    K+ 
Sbjct: 230 -EARGWGVTLVDVQAIRQFLEATADRILGDIGLPPLYGTPPPRDCPLTYMTSI----KQT 284

Query: 118 NFFETRVTEY 127
           NFFE    +Y
Sbjct: 285 NFFEQESADY 294


>gi|291290450|dbj|BAI83245.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           AR1]
          Length = 392

 Score = 38.9 bits (89), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++   +   W K   E +Q++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQE 296

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G V GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 297 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|213420352|ref|ZP_03353418.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 88

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 67  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 8   SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 49


>gi|213855386|ref|ZP_03383626.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
          Length = 80

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 68  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 1   MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 41


>gi|228861541|ref|YP_002854562.1| ribonucleotide reductase B subunit [Enterobacteria phage RB14]
 gi|227438557|gb|ACP30870.1| ribonucleotide reductase B subunit [Enterobacteria phage RB14]
          Length = 392

 Score = 38.9 bits (89), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++   +   W K   E +Q++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQE 296

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G V GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 297 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|327409820|ref|YP_004347240.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
 gi|326784994|gb|AEA07128.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
          Length = 319

 Score = 38.5 bits (88), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/131 (22%), Positives = 61/131 (46%), Gaps = 3/131 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    ++I RDE+LH  F  +V+    ++   ++ +  Q++   +L  A      +   
Sbjct: 181 GLRTANEWISRDEALHKKFA-EVLYNFLVDELKVFERVSQERCHEILTSAIEAVTDFIKY 239

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++    V ++A     YM+   +     +  E ++   EN   +M  +I L+ + NFFE 
Sbjct: 240 SLRLDNVNIDADRMLGYMKRAVDDLATGLKYEKVYN-AENTLDYML-LIGLENKGNFFEG 297

Query: 123 RVTEYQQGAGL 133
            +T+Y +G  +
Sbjct: 298 VITDYSKGMDM 308


>gi|213581345|ref|ZP_03363171.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 90

 Score = 38.5 bits (88), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 67  GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
             +GLN     QY+++I N R   +GL+  F+   NP PW++
Sbjct: 10  SMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWIN 51


>gi|216905873|ref|YP_002333501.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 9]
 gi|216410027|dbj|BAH02445.1| small subunit of ribonucleotide reductase [Equid herpesvirus 9]
          Length = 321

 Score = 38.5 bits (88), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 16/124 (12%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKGF 68
           I RDE++H            I N +L   E  +  R   +  EA  +E  +     P+  
Sbjct: 201 ISRDEAIHTR------ASCCIYNNYLGGFEKPEPKRIYELFSEAVNIECEFLLSHAPQNS 254

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKY----TENPFPWMSEVIDLKKEKNFFETRV 124
             L+      Y+++ A+R   +IGL PLF      T  P  +M+    ++K  NFFE R 
Sbjct: 255 HLLDIGEIISYVRYSADRLLGEIGLSPLFNAPKPSTSFPLAFMT----VEKHTNFFERRS 310

Query: 125 TEYQ 128
           T Y 
Sbjct: 311 TAYS 314


>gi|269975299|gb|ACZ55523.1| ribonucleoside diphosphate reductase beta chain [Staphylococcus
           phage SA1]
          Length = 357

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 12/137 (8%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAY 59
           GIA+  Q IM DE LH    I+V+ +   ++   W K FQQ   + + +L E    E  +
Sbjct: 211 GIAQAVQKIMLDEILHTKIDIEVLKETLRDDE--WQKAFQQILPEIKVILDEVVESEEKW 268

Query: 60  AHETMPKG--FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKE 116
           ++    +G   VGLN     +++ + A       G+   F    E P  +M + +++ KE
Sbjct: 269 SYYIFSEGRAVVGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKE 328

Query: 117 KNFFETRVTEYQQGAGL 133
           +N  +    E Q GA L
Sbjct: 329 QNANQ----EQQNGAYL 341


>gi|9632793|ref|NP_049841.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage T4]
 gi|1172940|sp|P11156|RIR2_BPT4 RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Protein B2; AltName: Full=Ribonucleotide
           reductase
 gi|5354417|gb|AAD42624.1|AF158101_211 NrdB aerobic NDP reductase, small subunit [Enterobacteria phage T4]
 gi|15342|emb|CAA27757.1| small subunit B2 [Enterobacteria phage T4]
 gi|299780589|gb|ADJ39951.1| aerobic NDP reductase small subunit [Enterobacteria phage T4T]
          Length = 388

 Score = 38.5 bits (88), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++   +   W K   E +Q++  +  E    E
Sbjct: 233 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQE 292

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G V GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 293 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 351


>gi|38707874|ref|NP_944994.1| Ribonucleoside triphosphate reductase, beta chain [Enterobacteria
           phage Felix 01]
 gi|238801854|ref|YP_002922904.1| ribonucleoside triphosphate reductase, beta chain [Enterobacteria
           phage WV8]
 gi|33340477|gb|AAQ14828.1| putative ribonucleoside diphosphate reductase beta chain
           [Enterobacteria phage Felix 01]
 gi|216263067|gb|ACJ71935.1| ribonucleoside triphosphate reductase, beta chain [Enterobacteria
           phage WV8]
          Length = 357

 Score = 38.5 bits (88), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 12/137 (8%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAY 59
           GIA+  Q IM DE LH    I+V+ +   ++   W K FQQ   + + +L E    E  +
Sbjct: 211 GIAQAVQKIMLDEILHTKIDIEVLKETLRDDE--WQKAFQQILPEIKVILDEVVESEEKW 268

Query: 60  AHETMPKG--FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKE 116
           ++    +G   VGLN     +++ + A       G+   F    E P  +M + +++ KE
Sbjct: 269 SYYIFSEGRAVVGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKE 328

Query: 117 KNFFETRVTEYQQGAGL 133
           +N  +    E Q GA L
Sbjct: 329 QNANQ----EQQNGAYL 341


>gi|116326446|ref|YP_803166.1| ribonucleotide reductase B subunit [Enterobacteria phage RB32]
 gi|32709425|gb|AAP86731.1| NrdB [Enterobacteria phage RB32]
 gi|115344039|gb|ABI95048.1| ribonucleotide reductase B subunit [Enterobacteria phage RB32]
          Length = 392

 Score = 38.5 bits (88), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++   +   W K   E +Q++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQE 296

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G V GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 297 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|32709433|gb|AAP86735.1| NrdB [Enterobacteria phage U5]
          Length = 391

 Score = 38.5 bits (88), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++   +   W K   E +Q++  +  E    E
Sbjct: 236 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQE 295

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G V GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 296 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 354


>gi|33340378|gb|AAQ14729.1|AF320576_197 putative ribonucleoside diphosphate reductase beta chain
           [Enterobacteria phage Felix 01]
          Length = 377

 Score = 38.1 bits (87), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 12/137 (8%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAY 59
           GIA+  Q IM DE LH    I+V+ +   ++   W K FQQ   + + +L E    E  +
Sbjct: 231 GIAQAVQKIMLDEILHTKIDIEVLKETLRDDE--WQKAFQQILPEIKVILDEVVESEEKW 288

Query: 60  AHETMPKG--FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKE 116
           ++    +G   VGLN     +++ + A       G+   F    E P  +M + +++ KE
Sbjct: 289 SYYIFSEGRAVVGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKE 348

Query: 117 KNFFETRVTEYQQGAGL 133
           +N  +    E Q GA L
Sbjct: 349 QNANQ----EQQNGAYL 361


>gi|326804582|ref|YP_004327453.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage
           Vi01]
 gi|301795232|emb|CBW37950.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage
           Vi01]
          Length = 367

 Score = 38.1 bits (87), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPH--LWTKEFQQKSRTMLHEATLLEIA 58
           M G A+  + I RDE  HL      +N++ + +P   +  +E + +   M  +    E  
Sbjct: 220 MEGNAKIIRQIARDEQDHLILTQTFLNRLPLLDPDFGIIREELRGEMTQMYVDVVNQEKE 279

Query: 59  YAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLK 114
           +A+     G  +GLNA    Q + ++A  R   IG   P     +NP PW++E +D K
Sbjct: 280 WANYLFKDGSMLGLNANILHQMVDWLATHRMGAIGHPYPGQARKDNPVPWINEWLDNK 337


>gi|193206379|ref|NP_500944.2| hypothetical protein F58F9.1 [Caenorhabditis elegans]
          Length = 581

 Score = 38.1 bits (87), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 39  KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 98
           K  + +   +++E+ L+E  +  E++P   +G+N     +Y++F+A+    ++G    + 
Sbjct: 502 KPAESRITEIINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN 561

Query: 99  YTENPFPWMSEVIDLKKEKNFF 120
            T+N F +M E I ++ + NFF
Sbjct: 562 -TKNLFDFM-ENISIEGKTNFF 581


>gi|32709437|gb|AAP86737.1| NrdB [Enterobacteria phage TuIa]
          Length = 391

 Score = 38.1 bits (87), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWT---KEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++   +   W    KE +Q++  +  E    E
Sbjct: 236 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDEWVQIAKECEQEAVDIFMEVNSQE 295

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   G+N  S   ++ ++   R  Q GL  P+    T++P+PW+ E ++
Sbjct: 296 KEWAAHLFKDGTCPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLN 354


>gi|255535950|ref|YP_003096321.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Flavobacteriaceae bacterium 3519-10]
 gi|255342146|gb|ACU08259.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Flavobacteriaceae bacterium 3519-10]
          Length = 324

 Score = 38.1 bits (87), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 4/120 (3%)

Query: 14  DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 72
           DE +H N GI +IN+I+ E P L T    +   T++  +  LE          G +  ++
Sbjct: 194 DEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDHSIELEAEILDWIFEMGEIDNVS 253

Query: 73  APSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKEKNFFETRVTEYQQ 129
             +   +M++  +    +IG++  +  + +   P  W  E +      +FF  R  +Y +
Sbjct: 254 KENLLNFMKYRVDDSLKKIGMQTRYNVSGDEYRPMVWFEEEVFANSMDDFFAKRPVDYTK 313


>gi|293411957|ref|ZP_06654682.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|309797907|ref|ZP_07692288.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|220980068|emb|CAP72260.1| Ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
           LF82]
 gi|291469512|gb|EFF12001.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|308118515|gb|EFO55777.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|323934216|gb|EGB30640.1| ribonucleotide reductase [Escherichia coli E1520]
          Length = 380

 Score = 38.1 bits (87), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 8/108 (7%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA-----YAHET 63
           ++I RDE+LH      +I  ++     L  KE       ++++ T+  +A     +A   
Sbjct: 235 RFIARDEALHCEGTERMIRFMRTGREGLLWKEIAADEENVIYD-TMKSVAEQEMNWADYL 293

Query: 64  MPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSE 109
              G  +GLNA   + Y+++  N   +++GL+ LF + T +P  WM++
Sbjct: 294 FKDGSMIGLNADILKTYVKYRTNLAMNRLGLKALFPEVTTDPLVWMNK 341


>gi|229172094|ref|ZP_04299659.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           MM3]
 gi|228611437|gb|EEK68694.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           MM3]
          Length = 133

 Score = 37.7 bits (86), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 5/124 (4%)

Query: 12  MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 71
           ++DES+H  F   +  Q+ +E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQLFVELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60

Query: 72  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 130
                 +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y + 
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKN-HDFFSVKGNGYVKA 118

Query: 131 AGLK 134
             ++
Sbjct: 119 TNVE 122


>gi|10834911|ref|NP_066872.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 3]
 gi|5102912|dbj|BAA78729.1| UL40 protein [Marek's disease virus serotype 2 MDV2]
 gi|5689312|dbj|BAA82936.1| UL40 product homolog [Marek's disease virus serotype 2 MDV2]
 gi|10800005|dbj|BAB16550.1| UL40 protein [Gallid herpesvirus 3]
          Length = 353

 Score = 37.7 bits (86), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 5/118 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE++H+     +       N     K    + + +  EA  LE A+     P+    
Sbjct: 234 ISRDEAIHVEASCCIFKNYIAGN-----KPSTARIQALFSEAVDLECAFLRAAAPRDSRL 288

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           L+  S   Y+++ A+R    + + P++        +   ++      NFFE R T Y 
Sbjct: 289 LDIGSICSYVRYSADRLLRMLDVPPIYGEPSPAADFPLSLMSASNNTNFFERRSTAYS 346


>gi|12084869|ref|NP_073334.1| ribonucleotide reductase subunit 2 [Meleagrid herpesvirus 1]
 gi|11095873|gb|AAG30080.1|AF282130_43 UL40 ribonucleotide reductase small subunit [Meleagrid herpesvirus
           1]
 gi|12025152|gb|AAG45778.1|AF291866_45 UL40 ribonucleotide reductase, small subunit [Meleagrid herpesvirus
           1]
          Length = 355

 Score = 37.7 bits (86), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 5/118 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE++H+     +      +N     K    +  T+  EA  LE  +     P+    
Sbjct: 236 ISRDEAIHVEASCCIF-----KNYLAGPKPTTARIHTLFKEAVRLECEFLRTAAPRTSNI 290

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           +N  +   Y+++ A+R    + + P++   + P  +   ++      NFFE R T Y 
Sbjct: 291 INIDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAYS 348


>gi|294669616|ref|ZP_06734683.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308529|gb|EFE49772.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 81

 Score = 37.7 bits (86), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 68  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS 108
            +GLN     QY+++I N R   +GL   F+  T+NP PW++
Sbjct: 1   MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWIN 42


>gi|59912|emb|CAA24930.1| unnamed protein product [Human herpesvirus 2]
          Length = 337

 Score = 37.7 bits (86), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 11/122 (9%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKGF 68
           I RDE++H            I N +L      + +R   +  EA  +EI +     P   
Sbjct: 214 ISRDEAVH------TTASCYIYNNYLGDHAKPEAARVYRLFREAVDIEIGFIRSQAPTDS 267

Query: 69  VGLNA---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVT 125
             L+     + E Y++F A+R    I ++PL+        +   ++   K  NFFE R T
Sbjct: 268 SILSPGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRST 327

Query: 126 EY 127
            Y
Sbjct: 328 SY 329


>gi|9629310|ref|NP_044510.1| ribonucleotide reductase subunit 2 [Human herpesvirus 2]
 gi|61231410|sp|P69520|RIR2_HHV23 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|61231418|sp|P69521|RIR2_HHV2H RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           Short=R2; AltName: Full=Ribonucleotide reductase 38 kDa
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|330200|gb|AAA45807.1| 38K protein [Human herpesvirus 2]
 gi|1869863|emb|CAB06726.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
 gi|224613173|dbj|BAH24264.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
 gi|224613175|dbj|BAH24265.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
          Length = 337

 Score = 37.7 bits (86), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 11/122 (9%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKGF 68
           I RDE++H            I N +L      + +R   +  EA  +EI +     P   
Sbjct: 214 ISRDEAVH------TTASCYIYNNYLGGHAKPEAARVYRLFREAVDIEIGFIRSQAPTDS 267

Query: 69  VGLNA---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVT 125
             L+     + E Y++F A+R    I ++PL+        +   ++   K  NFFE R T
Sbjct: 268 SILSPGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRST 327

Query: 126 EY 127
            Y
Sbjct: 328 SY 329


>gi|256422447|ref|YP_003123100.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588]
 gi|256037355|gb|ACU60899.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588]
          Length = 324

 Score = 37.4 bits (85), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 4/120 (3%)

Query: 14  DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 72
           DE +H N GI +IN+I+ E P ++ +    +   ++ E+  +E         +G +  ++
Sbjct: 194 DEQIHANAGIYLINKIREEYPEMFDEATITRVSNLVKESIEVESNILDWIFSEGKIDTVS 253

Query: 73  APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
                 +M++ A+    +I L  LF  +     P  W  E +      +FF  R  +Y +
Sbjct: 254 KEHLVNFMKYRADDSLKKINLPALFNISTEDNKPMLWFEEEVFANSLDDFFAKRPVDYTK 313


>gi|50313261|ref|YP_053065.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 1]
 gi|132625|sp|P28847|RIR2_EHV1B RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|42795147|gb|AAS45904.1| small subunit of ribonucleotide reductase [Equid herpesvirus 1]
 gi|49617004|gb|AAT67277.1| ribonucleotide reductase RR2 [Equid herpesvirus 1]
          Length = 321

 Score = 37.4 bits (85), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 8/120 (6%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKGF 68
           I RDE++H            I N +L   E  +  R   +  EA  +E  +     P+  
Sbjct: 201 ISRDEAIHTR------ASCCIYNNYLGGFEKPEPKRIYELFSEAVNIECEFLLSHAPQYS 254

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
             L+  +   Y+++ A+R   +IGL PLF   +    +    + ++K  NFFE R T Y 
Sbjct: 255 HLLDIGAIISYVRYSADRLLGEIGLSPLFNAPKPSPSFPLAFMTVEKHTNFFERRSTAYS 314


>gi|228957728|ref|ZP_04119472.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228801971|gb|EEM48844.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 133

 Score = 37.4 bits (85), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 12  MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 71
           ++DES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60

Query: 72  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 130
                 +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y + 
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKN-HDFFSVKGNGYVKA 118

Query: 131 AGLK 134
             ++
Sbjct: 119 TNVE 122


>gi|221783|dbj|BAA00748.1| UL40 [Human herpesvirus 2]
          Length = 262

 Score = 37.4 bits (85), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 11/122 (9%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT--MLHEATLLEIAYAHETMPKGF 68
           I RDE++H            I N +L      + +R   +  EA  +EI +     P   
Sbjct: 139 ISRDEAVH------TTASCYIYNNYLGGHAKPEAARVYRLFREAVDIEIGFIRSQAPTDS 192

Query: 69  VGLNA---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVT 125
             L+     + E Y++F A+R    I ++PL+        +   ++   K  NFFE R T
Sbjct: 193 SILSPGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFFECRST 252

Query: 126 EY 127
            Y
Sbjct: 253 SY 254


>gi|325955614|ref|YP_004239274.1| ribonucleotide reductase [Weeksella virosa DSM 16922]
 gi|323438232|gb|ADX68696.1| ribonucleotide reductase [Weeksella virosa DSM 16922]
          Length = 324

 Score = 37.4 bits (85), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 4/120 (3%)

Query: 14  DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 72
           DE +H N GI ++N+IK E P  +++E  Q+ + ++  +  +E         +G +  + 
Sbjct: 194 DEQIHANAGIYIVNKIKEEFPDFFSEETIQEIKNVVTHSIEVESQILDWIFEQGEIETIK 253

Query: 73  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
                 +M++  +    +IG   ++  T     P  W  E +      +FF  R  +Y +
Sbjct: 254 KKDLLNFMKYRVDESMLKIGFGKIYNITAEQYQPMVWFEEEVFANSLDDFFAKRPVDYTK 313


>gi|196040733|ref|ZP_03108032.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           NVH0597-99]
 gi|206977638|ref|ZP_03238531.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           H3081.97]
 gi|217958931|ref|YP_002337479.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus
           AH187]
 gi|222095088|ref|YP_002529148.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           Q1]
 gi|229138142|ref|ZP_04266740.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           BDRD-ST26]
 gi|229195652|ref|ZP_04322418.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           m1293]
 gi|196028523|gb|EDX67131.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           NVH0597-99]
 gi|206744211|gb|EDZ55625.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           H3081.97]
 gi|217064629|gb|ACJ78879.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus
           AH187]
 gi|221239146|gb|ACM11856.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           Q1]
 gi|228587901|gb|EEK45953.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           m1293]
 gi|228645487|gb|EEL01721.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           BDRD-ST26]
          Length = 133

 Score = 37.4 bits (85), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 12  MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 71
           ++DES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60

Query: 72  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 130
                 +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y + 
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKN-HDFFSVKGNGYVKA 118

Query: 131 AGLK 134
             ++
Sbjct: 119 TNVE 122


>gi|257464834|ref|ZP_05629205.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor 202]
 gi|257450494|gb|EEV24537.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor 202]
          Length = 326

 Score = 37.4 bits (85), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 16/137 (11%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E +H  FGI +   ++ E+  L+T  F ++ +T+ ++A   E      
Sbjct: 185 GISNAVEATSKEEEIHGKFGIALYEILRDEHSELFTPAFFEELQTLANQAFEAEKGILDW 244

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQ---IGLEP-------LFKYTENPFPWMSEVID 112
              +G   L+  S E  + +I +R  +    +GLEP       L K T     W    I 
Sbjct: 245 IFEEG--DLSFISKETVLNYIKSRYNNSLVTLGLEPPHNINPELLKET----AWFDIEIL 298

Query: 113 LKKEKNFFETRVTEYQQ 129
             KE +FF  R T+Y +
Sbjct: 299 STKETDFFNKRSTDYSK 315


>gi|703073|gb|AAA80557.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2]
          Length = 354

 Score = 37.0 bits (84), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 5/118 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE++H+     +      +N     K    +  T+  EA  +E  +     P+    
Sbjct: 235 ISRDEAIHVEASCCIF-----KNYLAGPKPTTARIHTLFKEAVTVECEFLRTAAPRTSNI 289

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           +N  +   Y+++ A+R    + + P++   + P  +   ++      NFFE R T Y 
Sbjct: 290 INIDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERRNTAYS 347


>gi|295698298|ref|YP_003602953.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Riesia pediculicola USDA]
 gi|291156973|gb|ADD79418.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Riesia pediculicola USDA]
          Length = 375

 Score = 37.0 bits (84), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 11/116 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSR--TMLHEATLLEIA 58
           M G A+  + I RDE+LH+     +IN   I       KE  + S+   M+ +   L ++
Sbjct: 224 MEGNAKIIKLIARDEALHVTGTQHMIN---IMQSSKEDKEMIEISKECLMICQKIFLNVS 280

Query: 59  -----YAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
                +A      G  +GLN    ++Y+ +I   R   IGL+       NP PW++
Sbjct: 281 DQEKRWADYLFSNGNLIGLNKKILKEYIDYITEVRMRAIGLKKDLIKKINPIPWIN 336


>gi|206968346|ref|ZP_03229302.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH1134]
 gi|228951834|ref|ZP_04113932.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|229069005|ref|ZP_04202298.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           F65185]
 gi|206737266|gb|EDZ54413.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH1134]
 gi|228714117|gb|EEL65999.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           F65185]
 gi|228807757|gb|EEM54278.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 133

 Score = 37.0 bits (84), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 12  MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 71
           ++DES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIYTS--IGL 60

Query: 72  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 130
                 +++++ AN+    +GLEP F+  E NP        D K   +FF  +   Y + 
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIVLNGLRTDTKN-HDFFSVKGNGYVKA 118

Query: 131 AGLK 134
             ++
Sbjct: 119 TNVE 122


>gi|159146681|gb|ABW90785.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4]
          Length = 316

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 15/124 (12%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG--- 67
           I RDE++H      + N    +    + K   ++ + +   A  +EIA+     P     
Sbjct: 193 ISRDEAVHTTASCCLYNNYLGQ----YAKPPSERIKQLFSNAVEIEIAFIKAKAPANSRI 248

Query: 68  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP----FPWMSEVIDLKKEKNFFETR 123
             G    + E Y++F A+R    IG   LF   E P    FP    ++  +K  NFFE R
Sbjct: 249 LDGAAIAAIESYVRFSADRLLKLIGEPALFD--EPPPNDGFPL--RLMSTEKHTNFFECR 304

Query: 124 VTEY 127
            T Y
Sbjct: 305 STAY 308


>gi|240950330|ref|ZP_04754600.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor NM305]
 gi|240295141|gb|EER45960.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor NM305]
          Length = 326

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 16/137 (11%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E +H  FGI +   ++ E+  L+T  F ++ +T+  +A   E      
Sbjct: 185 GISNAVEATSKEEEIHGKFGIALYEILRDEHSELFTPAFFEELQTLASQAFEAEKGILDW 244

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQ---IGLEP-------LFKYTENPFPWMSEVID 112
              +G   L+  S E  + +I +R  +    +GLEP       L K T     W    I 
Sbjct: 245 IFEEG--DLSFISKETVLNYIKSRYNNSLVTLGLEPPHDINPELLKET----AWFDIEIL 298

Query: 113 LKKEKNFFETRVTEYQQ 129
             KE +FF  R T+Y +
Sbjct: 299 STKETDFFNKRSTDYSK 315


>gi|301750612|gb|ADK88940.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4]
          Length = 316

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 15/124 (12%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG--- 67
           I RDE++H      + N    +    + K   ++ + +   A  +EIA+     P     
Sbjct: 193 ISRDEAVHTTASCCLYNNYLGQ----YAKPPSERIKQLFSNAVEIEIAFIKAKAPANSRI 248

Query: 68  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP----FPWMSEVIDLKKEKNFFETR 123
             G    + E Y++F A+R    IG   LF   E P    FP    ++  +K  NFFE R
Sbjct: 249 LDGAAIAAIESYVRFSADRLLKLIGEPALFD--EPPPNDGFPL--RLMSTEKHTNFFECR 304

Query: 124 VTEY 127
            T Y
Sbjct: 305 STAY 308


>gi|297622357|ref|YP_003703791.1| ribonucleotide reductase [Truepera radiovictrix DSM 17093]
 gi|297163537|gb|ADI13248.1| ribonucleotide reductase [Truepera radiovictrix DSM 17093]
          Length = 324

 Score = 36.6 bits (83), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 4/131 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A   +   ++E +H  FG  ++  ++ E P  +   F  + R    +A   E A    
Sbjct: 181 GVANIVEATSKEEQIHGMFGYKLVETLRRERPEWFGAAFSARLRAACVDAERAERAILRW 240

Query: 63  TMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN 118
               G +  L     E +MQ   N     +G  PL++       P  W  E +   K+ +
Sbjct: 241 ICEAGALPFLPLAQLEAFMQARFNGALVALGEAPLWEVDPALLAPTRWFEEELLSSKQVD 300

Query: 119 FFETRVTEYQQ 129
           FF  R T Y +
Sbjct: 301 FFHKRPTAYAK 311


>gi|228473186|ref|ZP_04057941.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275336|gb|EEK14128.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 319

 Score = 36.2 bits (82), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 5/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  +A    +   DE +H N GI ++  I  ENP   TK  ++++   + E  LLE    
Sbjct: 177 MKNVANIIAWTSVDEQVHANAGIYILKTIFDENPEFRTKA-KKEATEFIREYILLEDKML 235

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKE 116
                +G +   +      YM++  +    Q+ L   F  T     P  W  E + + + 
Sbjct: 236 DWIFEEGELEFFSKKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNEL 295

Query: 117 KNFFETRVTEYQQ 129
            +FF  R T Y +
Sbjct: 296 DDFFAKRPTAYTK 308


>gi|326336655|ref|ZP_08202823.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325691125|gb|EGD33096.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 319

 Score = 36.2 bits (82), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 5/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  +A    +   DE +H N GI ++  I  ENP   TK  ++++   + E  LLE    
Sbjct: 177 MKNVANIIAWTSIDEQVHANAGIYILKTIFEENPEFRTKA-KEEATQFIREYILLEDKML 235

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKE 116
                +G +          YM++  +    Q+ L   F  T     P  W  E + + + 
Sbjct: 236 DWIFEEGELDFFTKKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNEL 295

Query: 117 KNFFETRVTEYQQ 129
            +FF  R T Y +
Sbjct: 296 DDFFAKRPTAYTK 308


>gi|18466786|ref|NP_569593.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|16506102|emb|CAD09988.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Salmonella enterica subsp. enterica serovar Typhi str.
           CT18]
          Length = 380

 Score = 36.2 bits (82), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/108 (24%), Positives = 54/108 (50%), Gaps = 8/108 (7%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA-----YAHET 63
           ++I RDE+LH      +I  ++     L  K    +  + +++ T++++A     +A   
Sbjct: 235 RFIARDEALHCEGTERMIRFMRTGREGLMWKMIAAEEESFIYQ-TMMDVAGQEMRWADYL 293

Query: 64  MPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSE 109
              G  +GLNA   + Y+++  N    ++GL  LF +  ++P  WM++
Sbjct: 294 FKDGSMIGLNADILKSYVKYRTNLAMRRLGLRQLFPEIKDDPLVWMNK 341


>gi|157311531|ref|YP_001469574.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           Phi1]
 gi|149380735|gb|ABR24740.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           Phi1]
          Length = 386

 Score = 35.8 bits (81), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 11/124 (8%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL------- 55
           G A+  ++I RDE LHL     +I Q +         E++Q +  +  EAT +       
Sbjct: 236 GNAKIMKFIARDEQLHLKGTQYIIRQWQTGAD---GDEWKQIAEELEGEATKIFLDVVEQ 292

Query: 56  EIAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK 114
           E  +       G +  L+    + Y++++A+ R    GL+  F    +P PWM + ++  
Sbjct: 293 EKEWVDHLFAMGAIPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSD 352

Query: 115 KEKN 118
           + +N
Sbjct: 353 EVQN 356


>gi|56694763|ref|YP_164483.1| ribonucleotide reductase subunit 2 [Cercopithecine herpesvirus 2]
 gi|52843315|gb|AAU88106.1| small subunit of ribonucleotide reductase [Cercopithecine
           herpesvirus 2]
          Length = 325

 Score = 35.8 bits (81), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE++H      + N   +   H   K   ++   +  EA  +EI +     P     
Sbjct: 202 ISRDEAVHTTASCYIYNNY-LAGHH---KPEPERVYRLFREAVEIEIGFIRSQAPADSRI 257

Query: 71  LNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 127
           L+A +    E Y++F A+R    I ++PLF        +   ++  +K  NFFE R T Y
Sbjct: 258 LDAAALAAIENYVRFSADRLLALIRMKPLFGAPAPAPSFPLSLMSTEKHTNFFECRSTAY 317


>gi|238695114|ref|YP_002922308.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE]
 gi|220029250|gb|ACL78185.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE]
          Length = 388

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 11/124 (8%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL------- 55
           G A+  ++I RDE LHL     +I Q +     +   E++Q +  +  EAT +       
Sbjct: 238 GNAKIMKFIARDEQLHLKGTQYIIRQWQT---GVDGDEWKQIAEELEGEATKIFLDVVEQ 294

Query: 56  EIAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK 114
           E  +       G +  L+    + Y++++A+ R    GL+  F    +P PWM + ++  
Sbjct: 295 EKEWVDHLFAMGAIPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSD 354

Query: 115 KEKN 118
           + +N
Sbjct: 355 EVQN 358


>gi|254976540|ref|ZP_05273012.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-66c26]
 gi|255093925|ref|ZP_05323403.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile CIP 107932]
 gi|255315677|ref|ZP_05357260.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-76w55]
 gi|255518338|ref|ZP_05386014.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-97b34]
 gi|255651455|ref|ZP_05398357.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-37x79]
 gi|260684515|ref|YP_003215800.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile CD196]
 gi|260688173|ref|YP_003219307.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile R20291]
 gi|260210678|emb|CBA65434.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile CD196]
 gi|260214190|emb|CBE06438.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile R20291]
          Length = 323

 Score = 35.8 bits (81), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 5/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV   E    I+RDESLH  +   +  +I      +  K  ++K  ++L+     EI Y 
Sbjct: 185 MVASGEIISLILRDESLHGKYIGLLAQEIYDSFDKMDKKMLEEKMYSILYSLMENEIEYT 244

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNF 119
           +    +   GL       ++++ ANR    +G E L+     NP   ++ +    K  +F
Sbjct: 245 NVIYRES--GLEKEVV-NFLKYNANRALENLGFEKLYTVDAINPIV-LNGLSTETKTHDF 300

Query: 120 FETRVTEYQQGA 131
           F T+   YQ+G 
Sbjct: 301 FSTKGNGYQKGV 312


>gi|298247783|ref|ZP_06971588.1| ribonucleotide reductase [Ktedonobacter racemifer DSM 44963]
 gi|297550442|gb|EFH84308.1| ribonucleotide reductase [Ktedonobacter racemifer DSM 44963]
          Length = 293

 Score = 35.8 bits (81), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 25/37 (67%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW 37
           M G+ +  QYI RDES H+ +G+ +I+++  ++  LW
Sbjct: 192 MPGLQQGIQYIKRDESRHIAYGVFLISRLVAQDKSLW 228


>gi|33620698|ref|NP_891801.1| aerobic NDP reductase small subunit [Enterobacteria phage RB49]
 gi|33438568|gb|AAL15125.2| aerobic NDP reductase small subunit [Enterobacteria phage RB49]
          Length = 386

 Score = 35.4 bits (80), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 11/124 (8%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL------- 55
           G A+  ++I RDE LHL     +I Q +     +   E++Q +  +  EAT +       
Sbjct: 236 GNAKIMKFIARDEQLHLKGTQYIIRQWQT---GVDGDEWKQIAEELEGEATKIFLDVVEQ 292

Query: 56  EIAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK 114
           E  +       G +  L+    + Y++++A+ R    GL+  F    +P PWM + ++  
Sbjct: 293 EKEWVDHLFAMGAIPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSD 352

Query: 115 KEKN 118
           + +N
Sbjct: 353 EVQN 356


>gi|255656920|ref|ZP_05402329.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-23m63]
 gi|296452239|ref|ZP_06893946.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP08]
 gi|296877591|ref|ZP_06901622.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP07]
 gi|296258926|gb|EFH05814.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP08]
 gi|296431442|gb|EFH17258.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP07]
          Length = 323

 Score = 35.4 bits (80), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 15/137 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI-----KIENPHLWTKEFQQKSRTMLHEATLL 55
           MV   E    I+RDESLH  +   +  +I     K++   L  K +    R M +E    
Sbjct: 185 MVASGEIISLILRDESLHGKYIGLLAQEIYDSFDKMDKEILEEKMYSILYRLMENEIEYT 244

Query: 56  EIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLK 114
            I Y    + K  V         ++++ ANR    +G E L+     NP   ++ +    
Sbjct: 245 NIIYRESGLEKEVV--------NFLKYNANRALENLGFEKLYTVDAINPIV-LNGLSTET 295

Query: 115 KEKNFFETRVTEYQQGA 131
           K  +FF T+   YQ+G 
Sbjct: 296 KTHDFFSTKGNGYQKGV 312


>gi|219847941|ref|YP_002462374.1| ribonucleotide-diphosphate reductase subunit beta [Chloroflexus
           aggregans DSM 9485]
 gi|219542200|gb|ACL23938.1| ribonucleotide reductase [Chloroflexus aggregans DSM 9485]
          Length = 297

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 17/69 (24%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL-EIAY 59
           M G+ E  + + +DES H+ +GI +++++   +  +W    ++ +  ++H   ++ EI  
Sbjct: 187 MPGVREGIRLLKQDESRHIAYGIYLLSRLIAADRQIWDHIVERMNELVIHALGVIDEIFT 246

Query: 60  AHETMPKGF 68
           +++TMP G 
Sbjct: 247 SYDTMPFGL 255


>gi|290992332|ref|XP_002678788.1| predicted protein [Naegleria gruberi]
 gi|284092402|gb|EFC46044.1| predicted protein [Naegleria gruberi]
          Length = 330

 Score = 35.4 bits (80), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 8/111 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  +      I RDE  H NF   + + +K       +K  Q    +++ EA  +E  + 
Sbjct: 194 MSALTISNDLIFRDEEFHSNFLYSLYSNLK------HSKLPQTLVHSLVKEAVDIEKEFI 247

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             ++P   + L+  S  QY++ +++      G E LF +TEN   W+ +++
Sbjct: 248 -TSLPTELIELDRNSMYQYVEVVSDNILISFGYEKLF-HTENQCSWIQDML 296


>gi|319954718|ref|YP_004165985.1| ATP-cone domain protein [Cellulophaga algicola DSM 14237]
 gi|319423378|gb|ADV50487.1| ATP-cone domain protein [Cellulophaga algicola DSM 14237]
          Length = 424

 Score = 35.4 bits (80), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 8/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G++   +   ++E +H +FGID+I  IK ENP  +  ++ +  + M  +A + E +    
Sbjct: 283 GVSNVVEATSKEEQIHGDFGIDIIKIIKKENPDWFDADYHKTIQQMCKDAFIAESSVVDW 342

Query: 63  TMPKGFVGLNAPSCEQYMQFIANR---RCHQIGLEPLFKYTENPFP---WMSEVIDLKKE 116
              KG   L+    +   +FI NR       IG+E +F+  E       W  + I   K 
Sbjct: 343 IFEKG--ELDFLPKDVVNEFIKNRFNNSLESIGIEKIFEVNEELIAETEWFDDEIIGTKH 400

Query: 117 KNFFETRVTEYQQ 129
            +FF  R   Y +
Sbjct: 401 GDFFVKRSINYSK 413


>gi|83722609|ref|YP_443887.1| ribonucleotide reductase subunit 2 [Papiine herpesvirus 2]
 gi|75905762|gb|ABA29294.1| UL40 [Papiine herpesvirus 2]
          Length = 339

 Score = 35.0 bits (79), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE++H      + N     +     K   ++   +  EA  +EI +     P     
Sbjct: 216 ISRDEAVHTTASCYIYNNYLAGH----RKPEPERVYRLFREAVEIEIGFIRSQAPADSRI 271

Query: 71  LNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 127
           L+A +    E Y++F A+R    I ++PLF        +   ++  +K  NFFE R T Y
Sbjct: 272 LDAAALAAIENYVRFSADRLLALIEMKPLFGAPAPAPSFPLNLMSTEKHTNFFERRSTAY 331


>gi|30960753|gb|AAP39174.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 35.0 bits (79), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 11/129 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAH 61
           I +    I RDE++H            I N +L    K    +   +  +A  +EI +  
Sbjct: 177 ICQSNDLISRDEAVH------TTASCYIYNNYLGGHAKPPPDRVYGLFRQAVEIEIGFIR 230

Query: 62  ETMPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
              P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  N
Sbjct: 231 SQAPTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTN 290

Query: 119 FFETRVTEY 127
           FFE R T Y
Sbjct: 291 FFECRSTSY 299


>gi|125745092|ref|YP_001033969.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 2]
 gi|327488446|sp|Q77MS0|RIR2_GAHVM RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|7673151|gb|AAF66775.1|AF147806_39 ribonucleotide reductase small subunit [Gallid herpesvirus 2]
 gi|10180745|gb|AAG14233.1|AF243438_48 UL40 ribonucleotide reductase small subunit-like protein [Gallid
           herpesvirus 2]
 gi|104304005|gb|ABF72280.1| HSV-1 UL40-like protein [Gallid herpesvirus 2]
 gi|148806369|gb|ABR13125.1| UL40 [Gallid herpesvirus 2]
 gi|194346388|gb|ACF49570.1| UL40 [synthetic construct]
 gi|194750382|gb|ACF94859.1| UL40 [Gallid herpesvirus 2]
 gi|237626230|gb|ACR02753.1| UL40 [synthetic construct]
 gi|237626404|gb|ACR02926.1| UL40 [synthetic construct]
          Length = 343

 Score = 35.0 bits (79), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 24/122 (19%), Positives = 51/122 (41%), Gaps = 5/122 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE++H+     +      +N  +  K    + + +  EA  +E A+     P+    
Sbjct: 224 ISRDEAIHVEASCCIF-----KNYLMGPKPSIGRVQELFKEAVQIECAFLRTAAPRNSQL 278

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 130
           L+  +   Y+++ A+R   ++ + P++   +    +   ++      NFFE R T Y   
Sbjct: 279 LDVEAICSYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAYSGS 338

Query: 131 AG 132
             
Sbjct: 339 VS 340


>gi|190896442|gb|ACE96734.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896490|gb|ACE96758.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score = 35.0 bits (79), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 7/81 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ EA  +E  + 
Sbjct: 140 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKEAVEIEREFV 192

Query: 61  HETMPKGFVGLNAPSCEQYMQ 81
            +++P   VG+N     QY++
Sbjct: 193 VDSLPCALVGMNGELMSQYIE 213


>gi|190896432|gb|ACE96729.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896434|gb|ACE96730.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896436|gb|ACE96731.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896438|gb|ACE96732.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896440|gb|ACE96733.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896444|gb|ACE96735.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896446|gb|ACE96736.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896448|gb|ACE96737.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896450|gb|ACE96738.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896452|gb|ACE96739.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896454|gb|ACE96740.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896456|gb|ACE96741.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896458|gb|ACE96742.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896460|gb|ACE96743.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896462|gb|ACE96744.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896464|gb|ACE96745.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896466|gb|ACE96746.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896468|gb|ACE96747.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896470|gb|ACE96748.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896472|gb|ACE96749.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896474|gb|ACE96750.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896476|gb|ACE96751.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896478|gb|ACE96752.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896482|gb|ACE96754.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896484|gb|ACE96755.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896486|gb|ACE96756.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896488|gb|ACE96757.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896492|gb|ACE96759.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896494|gb|ACE96760.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896496|gb|ACE96761.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896498|gb|ACE96762.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896500|gb|ACE96763.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896502|gb|ACE96764.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896504|gb|ACE96765.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896506|gb|ACE96766.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 7/81 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ EA  +E  + 
Sbjct: 140 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------KKLSEERVKGIVKEAVEIEREFV 192

Query: 61  HETMPKGFVGLNAPSCEQYMQ 81
            +++P   VG+N     QY++
Sbjct: 193 VDSLPCALVGMNGELMSQYIE 213


>gi|147800139|emb|CAN68817.1| hypothetical protein VITISV_036653 [Vitis vinifera]
          Length = 924

 Score = 35.0 bits (79), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)

Query: 100 TENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 131
            ENPF WM E I L+   NFF+ R+ +YQ+ +
Sbjct: 755 VENPFDWM-EFISLQGNANFFQRRMGDYQKAS 785


>gi|30960831|gb|AAP39226.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 35.0 bits (79), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 21/127 (16%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAY--------A 60
           I RDE++H            I N +L    K   ++   +  +A  +EI +        +
Sbjct: 184 ISRDEAVH------TTASCYIYNNYLGGHAKPPPERVYGLFRQAVEIEIGFIRSQAPTDS 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           H   P   V +     E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 238 HILSPAALVAI-----ENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 292

Query: 121 ETRVTEY 127
           E R T Y
Sbjct: 293 ECRSTSY 299


>gi|46143780|ref|ZP_00134247.2| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 336

 Score = 34.7 bits (78), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL    +++N I    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGL 93
             +A      G  +GLN     +Y+++I N R   +GL
Sbjct: 285 KEWAAYLFKDGSMIGLNEDILVKYVEYITNIRMQAVGL 322


>gi|325184684|emb|CCA19175.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 1811

 Score = 34.7 bits (78), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 6   EQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           +Q  +++R E+L L   ID ++    ++   WT E QQKS  +    + LE AYA E
Sbjct: 284 QQEVHLLRKENLQLTQIIDALSDRPFQD---WTAEMQQKSAQLTALQSDLEAAYARE 337


>gi|256820037|ref|YP_003141316.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271]
 gi|315225453|ref|ZP_07867266.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea
           F0287]
 gi|256581620|gb|ACU92755.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271]
 gi|314944551|gb|EFS96587.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea
           F0287]
          Length = 319

 Score = 34.7 bits (78), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 14  DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG-LN 72
           DE LH N GI ++ +I  ENP +  K  ++ + T +     LE         +G +   +
Sbjct: 190 DEQLHANAGIYILKKIFEENPEMKAKA-EEDATTFIRSYITLEDKMLDWIFEQGELEFFS 248

Query: 73  APSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
                 YM++  +    Q+GL   F  +     P  W  E +   +  +FF  R T Y +
Sbjct: 249 KKDLSNYMRYRLDDSLTQLGLGKPFGISGEEAKPMMWFEEEVFSNELDDFFAKRPTAYTK 308


>gi|314121808|ref|YP_004063927.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           vB_EcoM-VR7]
 gi|313151565|gb|ADR32621.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           vB_EcoM-VR7]
          Length = 392

 Score = 34.7 bits (78), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     ++ Q++   +   W K   E + ++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYILRQLQTGVDGDEWVKIAHECEAEAAAIFMEVNRQE 296

Query: 57  IAYA-HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGL--EPLFKYTENPFPWMSEVID 112
             +A H     G  GL+     +++ ++   R  Q GL  E + + T++P PW+ E ++
Sbjct: 297 KEWAVHLFKDGGLPGLSVEILNRFIDYLTVSRMKQCGLPCEIVLESTKHPIPWIREYLN 355


>gi|308814593|ref|YP_003934867.1| ribonucleotide reductase B subunit [Shigella phage SP18]
 gi|308206185|gb|ADO19584.1| ribonucleotide reductase B subunit [Shigella phage SP18]
          Length = 392

 Score = 34.7 bits (78), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     ++ Q++   +   W K   E + ++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYILRQLQTGVDGDEWVKIAHECEAEAAAIFMEVNRQE 296

Query: 57  IAYA-HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGL--EPLFKYTENPFPWMSEVID 112
             +A H     G  GL+     +++ ++   R  Q GL  E + + T++P PW+ E ++
Sbjct: 297 KEWAVHLFKDGGLPGLSVEILNRFIDYLTVSRMKQCGLPCEIVLESTKHPIPWIREYLN 355


>gi|126700615|ref|YP_001089512.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile 630]
 gi|255102106|ref|ZP_05331083.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-63q42]
 gi|255307975|ref|ZP_05352146.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile ATCC 43255]
 gi|115252052|emb|CAJ69888.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Clostridium difficile]
          Length = 323

 Score = 34.7 bits (78), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 7/133 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKE-FQQKSRTMLHEATLLEIAY 59
           MV   E    I+RDESLH  + I ++ Q   ++     KE  ++K  ++L+     EI Y
Sbjct: 185 MVASGEIISLILRDESLHGKY-IGLLAQEIYDSFDKMDKEMLEEKMYSILYSLMENEIEY 243

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKN 118
            +    +   GL       ++++ ANR    +G E L+     NP   ++ +    K  +
Sbjct: 244 TNVIYRES--GLEKEVV-NFLKYNANRALENLGFEKLYTVDAINPIV-LNGLSTETKTHD 299

Query: 119 FFETRVTEYQQGA 131
           FF T+   YQ+G 
Sbjct: 300 FFSTKGNGYQKGV 312


>gi|45259565|dbj|BAD12265.1| p53-inducible ribonucleotide reductase small subunit 2 short form
           beta [Homo sapiens]
          Length = 66

 Score = 34.7 bits (78), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 1/32 (3%)

Query: 100 TENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 131
            ENPF +M E I L+ + NFFE RV+EYQ+ A
Sbjct: 20  AENPFDFM-ENISLEGKTNFFEKRVSEYQRFA 50


>gi|30960813|gb|AAP39214.1| UL40 [Human herpesvirus 1]
 gi|30960819|gb|AAP39218.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 34.7 bits (78), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 11/122 (9%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
           I RDE++H            I N +L    K   ++   +  +A  +EI +     P   
Sbjct: 184 ISRDEAVH------TTASCYIYNNYLGGHAKPPPERVYGLFRQAVEIEIGFIRSQAPTDS 237

Query: 69  VGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVT 125
             L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T
Sbjct: 238 HILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRST 297

Query: 126 EY 127
            Y
Sbjct: 298 SY 299


>gi|57790965|ref|YP_182369.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 1]
 gi|5918981|gb|AAD56212.1|AF168792_13 ribonucleotide reductase small subunit [Gallid herpesvirus 1]
          Length = 310

 Score = 34.7 bits (78), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 20/135 (14%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLEI 57
           V + +    I RDE++H      + N         W  + ++ S   +H    EA  +E 
Sbjct: 181 VVMCQSNDLISRDEAVHTTASCRIYNN--------WLGDHKKPSAKRIHQLFKEAIEIEC 232

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP----FPWMSEVIDL 113
            +     P+    ++  + + ++++  +R    IG+  +F   E P    FP     ID 
Sbjct: 233 NFLASRAPQASRLIDLEAIQSFVRYSGDRLLTAIGVPTIFD--EPPPDPSFPLTLMSID- 289

Query: 114 KKEKNFFETRVTEYQ 128
            K  NFFE R T Y 
Sbjct: 290 -KNVNFFEHRSTAYN 303


>gi|329738368|gb|AEB97332.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 1]
          Length = 310

 Score = 34.7 bits (78), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 20/135 (14%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLH----EATLLEI 57
           V + +    I RDE++H      + N         W  + ++ S   +H    EA  +E 
Sbjct: 181 VVMCQSNDLISRDEAVHTTASCRIYNN--------WLGDHKKPSAKRIHQLFKEAIEIEC 232

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP----FPWMSEVIDL 113
            +     P+    ++  + + ++++  +R    IG+  +F   E P    FP     ID 
Sbjct: 233 NFLASRAPQASRLIDLEAIQSFVRYSGDRLLTAIGVPTIFD--EPPPDPSFPLTLMSID- 289

Query: 114 KKEKNFFETRVTEYQ 128
            K  NFFE R T Y 
Sbjct: 290 -KNVNFFEHRSTAYN 303


>gi|30960420|gb|AAP38952.1| UL40 [Human herpesvirus 1]
 gi|30960423|gb|AAP38954.1| UL40 [Human herpesvirus 1]
 gi|30960426|gb|AAP38956.1| UL40 [Human herpesvirus 1]
 gi|30960465|gb|AAP38982.1| UL40 [Human herpesvirus 1]
 gi|30960525|gb|AAP39022.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 34.7 bits (78), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE++H      + N     +     K    +   +  +A  +EI +     P     
Sbjct: 184 ISRDEAVHTTASCYIYNNYLSGH----AKPPPDRVYGLFRQAVEIEIGFIRSQAPTDSHI 239

Query: 71  LNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 127
           L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFFE R T Y
Sbjct: 240 LSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFFECRSTSY 299


>gi|326932791|ref|XP_003212496.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin-1-like [Meleagris gallopavo]
          Length = 1998

 Score = 34.3 bits (77), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 23/35 (65%)

Query: 1    MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPH 35
            M+ IAEQ      + +  L FG+D IN+I++ENP+
Sbjct: 1430 MIDIAEQLGLSWAELARELQFGVDDINRIRVENPN 1464


>gi|258544274|ref|ZP_05704508.1| ribonucleoside-diphosphate reductase, beta subunit [Cardiobacterium
           hominis ATCC 15826]
 gi|258520512|gb|EEV89371.1| ribonucleoside-diphosphate reductase, beta subunit [Cardiobacterium
           hominis ATCC 15826]
          Length = 325

 Score = 34.3 bits (77), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 8/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE---IAY 59
           GI+   +   ++E +H  FGI +   I+ E+P L+T +F  + + + + A   E   + +
Sbjct: 184 GISNAVEATSKEEEIHGRFGIALYGIIRDEHPRLFTPDFYDELQQLANHALEAERGILRW 243

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKE 116
             E     F+ L+  + E Y+    N     +G+   +           W    I   KE
Sbjct: 244 IFEDGDLDFITLD--TVENYITNRYNNSLEILGINAPYLVDTKKLRETEWFDIEILSGKE 301

Query: 117 KNFFETRVTEYQQ 129
            +FF  R T+Y +
Sbjct: 302 GDFFYKRSTDYSK 314


>gi|159040974|ref|YP_001540226.1| Alpha-L-fucosidase [Caldivirga maquilingensis IC-167]
 gi|157919809|gb|ABW01236.1| Alpha-L-fucosidase [Caldivirga maquilingensis IC-167]
          Length = 484

 Score = 34.3 bits (77), Expect = 5.4,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 10/97 (10%)

Query: 31  IENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV---GLNAPSCEQYMQFI 83
           I+ PH    LW +  +      L++  L  I    +  P+ F     +  PS E Y++F 
Sbjct: 193 IKEPHEQGKLWPQPVEPPGEAFLNDWLLRAIELVDKYRPQLFYFDWWIEYPSFEPYLRFF 252

Query: 84  AN---RRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
                 R +Q GLE    Y  N  P  + V+D+++ K
Sbjct: 253 TAYYYNRAYQWGLEVAINYKHNAMPSWAGVLDVERGK 289


>gi|146301802|ref|YP_001196393.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101]
 gi|146156220|gb|ABQ07074.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101]
          Length = 324

 Score = 34.3 bits (77), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 14  DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 72
           DE +H N GI +IN+I+ E P  + +E     R  + ++  +E         +G +  + 
Sbjct: 194 DEQIHANGGIYIINKIREEFPDYFDEETLALVRETVKDSIAVESDILDWIFEEGEIESIK 253

Query: 73  APSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEKNFFETRVTEYQQ 129
                 +M+F  +    QI +  +F      +    W  E +      +FF  R  EY +
Sbjct: 254 KGDLVNFMKFRIDESLKQINIPVIFDVKVEDYKALAWFEEEVFANSLDDFFAKRPVEYTK 313


>gi|109290088|ref|YP_656337.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25]
 gi|104345761|gb|ABF72661.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25]
          Length = 332

 Score = 34.3 bits (77), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 15/128 (11%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
           +G A  +Q + R+  +   +G DV  ++K +  ++  + F        HE+ ++++ +A 
Sbjct: 207 IGGAMLFQTLCRE--MKEKYGEDVRAKLKNDIINMARQVFD-------HESGIIDLVFA- 256

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP-WMSEVIDLKKEKNFF 120
               +   G+ A     +++   N     +G EP+F+   NP   W    I+ KK  +FF
Sbjct: 257 ----EPIDGITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFYRTINAKKFHDFF 312

Query: 121 ETRVTEYQ 128
               +EY 
Sbjct: 313 TGSGSEYN 320


>gi|300776394|ref|ZP_07086252.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC
           35910]
 gi|300501904|gb|EFK33044.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC
           35910]
          Length = 371

 Score = 33.9 bits (76), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 4/120 (3%)

Query: 14  DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV-GLN 72
           DE +H N GI +IN+I+ E P L T    +   T++ E+   E          G +  ++
Sbjct: 241 DEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDESIAREGDILSWIFELGEIDNVS 300

Query: 73  APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
                 +M++  +    +I ++  +  T     P  W  E +      +FF  R  +Y +
Sbjct: 301 KEDLLNFMKYRVDDSLKKINMKTRYNITPEQYRPMVWFEEEVFANSLDDFFAKRPVDYTK 360


>gi|289705575|ref|ZP_06501967.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus
           luteus SK58]
 gi|289557804|gb|EFD51103.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus
           luteus SK58]
          Length = 323

 Score = 33.9 bits (76), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIEN-PHLWTKEFQQKSRTMLHEATLLEIAY 59
           +   A+  + I+RDE++H  + I    Q  IE  P    +E +  +  +L E    E+ Y
Sbjct: 182 LTNTADLIRLIIRDEAVH-GYYIGYKYQRSIETLPEEKREELKAFTFELLFELYENEVEY 240

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKN 118
            H+      VGL A   ++++ + AN+    +G EP+F   T N  P +   +    ++N
Sbjct: 241 THDLYDA--VGL-AEDVKKFLHYNANKALMNLGYEPMFPAETTNVNPAILSALSPNSDEN 297

Query: 119 --FFETRVTEYQQG 130
             FF    + Y  G
Sbjct: 298 HDFFSGSGSSYVIG 311


>gi|55978391|ref|YP_145447.1| ribonucleoside-diphosphate reductase, beta subunit [Thermus
           thermophilus HB8]
 gi|55773564|dbj|BAD72004.1| ribonucleoside-diphosphate reductase, beta subunit [Thermus
           thermophilus HB8]
          Length = 294

 Score = 33.9 bits (76), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 27/136 (19%), Positives = 58/136 (42%), Gaps = 14/136 (10%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI+   +   ++E++H  FG++++  ++ E+P    + FQ+++  +        +  A E
Sbjct: 153 GISNAIEATSKEENVHGLFGVELLRLLRTEHPEALGEGFQEEALRLAQ-----GLFRAEE 207

Query: 63  TMPKGFVGLNAPSC---EQYMQFIANRRCHQI---GLEPLFKYTENPF---PWMSEVIDL 113
            +         P+     + ++F+  R    +   GL P+F   E       W +  +  
Sbjct: 208 ALLDWLFSAGEPALVGHRETLEFLKGRYNQVLALHGLPPVFSVDEKALRDTEWFTLELLA 267

Query: 114 KKEKNFFETRVTEYQQ 129
            KE +FF  R   Y +
Sbjct: 268 DKEVDFFNKRSVAYAR 283


>gi|239917558|ref|YP_002957116.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
 gi|281413955|ref|ZP_06245697.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
 gi|239838765|gb|ACS30562.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
          Length = 323

 Score = 33.9 bits (76), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIEN-PHLWTKEFQQKSRTMLHEATLLEIAY 59
           +   A+  + I+RDE++H  + I    Q  IE  P    +E +  +  +L E    E+ Y
Sbjct: 182 LTNTADLIRLIIRDEAVH-GYYIGYKYQRSIETLPEEKREELKAFTFELLFELYENEVEY 240

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKN 118
            H+      VGL A   ++++ + AN+    +G EP+F   T N  P +   +    ++N
Sbjct: 241 THDLYDA--VGL-AEDVKKFLHYNANKALMNLGYEPMFPAETTNVNPAILSALSPNSDEN 297

Query: 119 --FFETRVTEYQQGAG 132
             FF    + Y  G  
Sbjct: 298 HDFFSGSGSSYVIGKA 313


>gi|37651592|ref|NP_932466.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t]
 gi|66391913|ref|YP_238838.1| hypothetical protein PHG31p109 [Aeromonas phage 31]
 gi|34732892|gb|AAQ81430.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t]
 gi|62114750|gb|AAX63598.1| hypothetical protein PHG31p109 [Aeromonas phage 31]
          Length = 323

 Score = 33.9 bits (76), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 10/88 (11%)

Query: 50  HEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP-WMS 108
           HE+ ++++ +A     +   G+ A     +++   N     +G +P+F+   NP   W  
Sbjct: 237 HESGIIDLVFA-----EPIDGITADELRIFVKSRINLCLENLGYDPIFEIESNPIASWFY 291

Query: 109 EVIDLKKEKNFFETRVTEYQQGAGLKWD 136
             I+ KK  +FF    +EY     + WD
Sbjct: 292 RTINAKKFHDFFTGSGSEYN----INWD 315


>gi|310722361|ref|YP_003969185.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4]
 gi|306021204|gb|ADM79739.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4]
          Length = 332

 Score = 33.9 bits (76), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 15/128 (11%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
           +G A  +Q + R+  +   +G DV  ++K +  ++  + F        HE+ ++++ +A 
Sbjct: 207 IGGAMLFQTLCRE--MKEKYGEDVRAKLKNDIINMAYQVFD-------HESGIIDLVFA- 256

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP-WMSEVIDLKKEKNFF 120
               +   G+ A     +++   N     +G EP+F+   NP   W    I+ KK  +FF
Sbjct: 257 ----EPIDGITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFYRTINAKKFHDFF 312

Query: 121 ETRVTEYQ 128
               +EY 
Sbjct: 313 TGSGSEYN 320


>gi|41387638|gb|AAS01682.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2]
          Length = 343

 Score = 33.5 bits (75), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 24/122 (19%), Positives = 50/122 (40%), Gaps = 5/122 (4%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE++H+     +      +N  +  K    + + +  EA  +E A+     P     
Sbjct: 224 ISRDEAIHVEASCCIF-----KNYLMGPKPSIGRVQELFKEAVQIECAFLRTAAPHNSQL 278

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 130
           L+  +   Y+++ A+R   ++ + P++   +    +   ++      NFFE R T Y   
Sbjct: 279 LDVEAICSYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAYSGS 338

Query: 131 AG 132
             
Sbjct: 339 VS 340


>gi|295695705|ref|YP_003588943.1| ribonucleotide reductase [Bacillus tusciae DSM 2912]
 gi|295411307|gb|ADG05799.1| ribonucleotide reductase [Bacillus tusciae DSM 2912]
          Length = 296

 Score = 33.5 bits (75), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 12/37 (32%), Positives = 25/37 (67%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW 37
           M G+ +  +Y+ RDES H+ +G  +++++  EN ++W
Sbjct: 186 MPGLLKAVEYLKRDESRHIGYGTYLLSRLIAENENVW 222


>gi|282859150|ref|ZP_06268276.1| thiamine monophosphate synthase/TENI [Prevotella bivia JCVIHMP010]
 gi|282588068|gb|EFB93247.1| thiamine monophosphate synthase/TENI [Prevotella bivia JCVIHMP010]
          Length = 194

 Score = 33.5 bits (75), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 4/66 (6%)

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQ-IGLEPLFKYTENP---FPWMSEVIDLKKEKN 118
           T+PKGF G+ + SC  + + I N+  H  + L P+F           +  E + L  ++ 
Sbjct: 82  TIPKGFKGIISKSCHSFQEVIENKETHNYLFLSPIFNSISKQGYLSAFTHESLTLAHKQQ 141

Query: 119 FFETRV 124
             ET V
Sbjct: 142 IIETNV 147


Searching..................................................done


Results from round 2




>gi|260220050|emb|CBA27200.1| Ribonucleoside-diphosphate reductase subunit alpha [Curvibacter
            putative symbiont of Hydra magnipapillata]
          Length = 1306

 Score =  228 bits (582), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 107/136 (78%)

Query: 1    MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
            M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA
Sbjct: 1171 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTPEFKAEIKALFEKAVELEYRYA 1230

Query: 61   HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             +TMP+G +G+NA   + Y+++IANRR  QIGLEPLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 1231 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEPLFPNEENPFPWMSEMIDLKKERNFF 1290

Query: 121  ETRVTEYQQGAGLKWD 136
            ETRV EYQ G  L WD
Sbjct: 1291 ETRVIEYQSGGALSWD 1306


>gi|288941383|ref|YP_003443623.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
 gi|288896755|gb|ADC62591.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
          Length = 458

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 94/136 (69%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+Q+   M+ EA  LE  YA
Sbjct: 323 MTGTAEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPEFRQELVGMIREAVELEARYA 382

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           H+TMP+G +GLNA   E Y+ FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFF
Sbjct: 383 HDTMPRGVLGLNAQMFEDYLHFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFF 442

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 443 ETRVTEYQTGGALNWD 458


>gi|238026167|ref|YP_002910398.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           glumae BGR1]
 gi|237875361|gb|ACR27694.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           glumae BGR1]
          Length = 407

 Score =  219 bits (560), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 272 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKRAVELEYRYA 331

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FIANRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 332 EDTMPRGVLGLNAAMFKSYLRFIANRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 391

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 392 ETRVIEYQTGGALSWE 407


>gi|92112799|ref|YP_572727.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter
           salexigens DSM 3043]
 gi|91795889|gb|ABE58028.1| Ribonucleoside-diphosphate reductase [Chromohalobacter salexigens
           DSM 3043]
          Length = 420

 Score =  219 bits (560), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 90/136 (66%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFG+D+INQIKIENPHLWT EFQ +   M+ E T LEIAYA
Sbjct: 285 MTGVAEQFQYILRDESMHLNFGVDMINQIKIENPHLWTPEFQDEVTQMIIEGTELEIAYA 344

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            ++MP+G +G+NA   E+Y+ FI NRR  QIGL+  +   ENPFPWMSE+IDL+KEKNFF
Sbjct: 345 RDSMPRGVLGMNAAIMEEYLHFICNRRLAQIGLKEQYPGAENPFPWMSEIIDLRKEKNFF 404

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 405 ETRVTEYQVGGALSWD 420


>gi|295677726|ref|YP_003606250.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
 gi|295437569|gb|ADG16739.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
          Length = 411

 Score =  219 bits (559), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 276 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYA 335

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 336 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 395

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 396 ETRVIEYQTGGALSWE 411


>gi|209521089|ref|ZP_03269819.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
 gi|209498472|gb|EDZ98597.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
          Length = 411

 Score =  219 bits (559), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 276 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRAIFQQAVELEYRYA 335

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 336 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 395

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 396 ETRVIEYQTGGALSWE 411


>gi|207744360|ref|YP_002260752.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
 gi|206595765|emb|CAQ62692.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
          Length = 410

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 92/136 (67%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 275 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 334

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 335 EDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFF 394

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 395 ETRVIEYQTGGALSWD 410


>gi|91785256|ref|YP_560462.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           xenovorans LB400]
 gi|91689210|gb|ABE32410.1| Ribonucleoside-diphosphate reductase [Burkholderia xenovorans
           LB400]
          Length = 411

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 276 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYA 335

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 336 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 395

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 396 ETRVIEYQTGGALTWE 411


>gi|300703002|ref|YP_003744604.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
           [Ralstonia solanacearum CFBP2957]
 gi|299070665|emb|CBJ41960.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CFBP2957]
          Length = 402

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 92/136 (67%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 387 ETRVIEYQTGGALSWD 402


>gi|254253304|ref|ZP_04946622.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
 gi|124895913|gb|EAY69793.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
          Length = 403

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|83746810|ref|ZP_00943858.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|207721465|ref|YP_002251905.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
 gi|83726579|gb|EAP73709.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|206586625|emb|CAQ17211.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
          Length = 402

 Score =  219 bits (558), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 92/136 (67%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 387 ETRVIEYQTGGALSWD 402


>gi|170699976|ref|ZP_02891003.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
 gi|170135124|gb|EDT03425.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
          Length = 403

 Score =  219 bits (558), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|115350552|ref|YP_772391.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria AMMD]
 gi|172059584|ref|YP_001807236.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria MC40-6]
 gi|115280540|gb|ABI86057.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria AMMD]
 gi|171992101|gb|ACB63020.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           MC40-6]
          Length = 403

 Score =  219 bits (558), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|220935777|ref|YP_002514676.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219997087|gb|ACL73689.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 408

 Score =  219 bits (558), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 91/136 (66%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+H+NFGIDVINQIK+ENPHLWT  F+++ RTM+ +A  LE  YA
Sbjct: 273 MTGVAEQFQYILRDESMHMNFGIDVINQIKVENPHLWTAAFKEEMRTMIRDAVELEAQYA 332

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+ FIANRRC QIGL  ++   ENPFPWMSEV+DLKKEKNFF
Sbjct: 333 RDTMPRGVLGMNAAMFEEYLHFIANRRCAQIGLAEIYPGAENPFPWMSEVLDLKKEKNFF 392

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 393 ETRVTEYQTGGALSWD 408


>gi|161525957|ref|YP_001580969.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|160343386|gb|ABX16472.1| Ribonucleoside-diphosphate reductase [Burkholderia multivorans ATCC
           17616]
          Length = 396

 Score =  219 bits (558), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 261 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 320

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 321 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 380

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 381 ETRVIEYQTGGALSWE 396


>gi|78065156|ref|YP_367925.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           383]
 gi|77965901|gb|ABB07281.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. 383]
          Length = 403

 Score =  219 bits (558), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|171318520|ref|ZP_02907672.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
 gi|171096306|gb|EDT41212.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
          Length = 403

 Score =  219 bits (558), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|34497739|ref|NP_901954.1| ribonucleotide-diphosphate reductase subunit beta [Chromobacterium
           violaceum ATCC 12472]
 gi|34103595|gb|AAQ59956.1| ribonucleoside-diphosphate reductase system [Chromobacterium
           violaceum ATCC 12472]
          Length = 360

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN IK+ENP LWT  F+ +   +  +A  LE AYA
Sbjct: 225 MTGAAEQYQYILRDESMHCNFGIDLINTIKLENPLLWTDSFKAEIVDLFKQAVELEYAYA 284

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y++FIANRR  QIGL+PLF    NPFPWMSE+IDLKKEKNFF
Sbjct: 285 EDTMPRGVLGLNASMFKEYLRFIANRRMQQIGLDPLFPGVNNPFPWMSEMIDLKKEKNFF 344

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 345 ETRVTEYQTGGALSWD 360


>gi|296160506|ref|ZP_06843322.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
 gi|295889255|gb|EFG69057.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
          Length = 415

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 280 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 340 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 400 ETRVIEYQTGGALTWE 415


>gi|307731037|ref|YP_003908261.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
 gi|307585572|gb|ADN58970.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
          Length = 411

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 276 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYA 335

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 336 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 395

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 396 ETRVIEYQTGGALTWE 411


>gi|224825450|ref|ZP_03698555.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
 gi|224602371|gb|EEG08549.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
          Length = 360

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN +K ENP LWT+EF+ +   +   A  LE AYA
Sbjct: 225 MTGAAEQYQYILRDESMHCNFGIDLINTVKQENPQLWTEEFKAEITGLFKHAVELEYAYA 284

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y++FIANRR  QIGLEP+F    NPFPWMSE+IDLKKEKNFF
Sbjct: 285 EDTMPRGVLGLNAAMFKEYLRFIANRRMQQIGLEPMFPGVTNPFPWMSEMIDLKKEKNFF 344

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 345 ETRVTEYQTGGALSWD 360


>gi|170731918|ref|YP_001763865.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia MC0-3]
 gi|169815160|gb|ACA89743.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           MC0-3]
          Length = 403

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|134294683|ref|YP_001118418.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           vietnamiensis G4]
 gi|134137840|gb|ABO53583.1| Ribonucleoside-diphosphate reductase [Burkholderia vietnamiensis
           G4]
          Length = 403

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|332039867|gb|EGI76262.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella
           gracilis ATCC 19624]
          Length = 399

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 264 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTPEFKAEIRGLFEKAVELEYRYA 323

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 324 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFF 383

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 384 ETRVIEYQSGGALSWD 399


>gi|189349324|ref|YP_001944952.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|221213238|ref|ZP_03586213.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
 gi|189333346|dbj|BAG42416.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           multivorans ATCC 17616]
 gi|221166690|gb|EED99161.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
          Length = 403

 Score =  218 bits (556), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|113869188|ref|YP_727677.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha H16]
 gi|113527964|emb|CAJ94309.1| Ribonucleoside-diphosphate reductase beta subunit [Ralstonia
           eutropha H16]
          Length = 395

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 90/136 (66%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 260 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 319

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 320 EDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFF 379

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 380 ETRVIEYQTGGALSWD 395


>gi|254282900|ref|ZP_04957868.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
 gi|219679103|gb|EED35452.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
          Length = 421

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT EFQ++   M+ E T LEI YA
Sbjct: 286 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTAEFQEEVVQMILEGTQLEIEYA 345

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFI NRR +Q+GL   +   +NPFPWMSE++DL+KEKNFF
Sbjct: 346 RDTMPRGVLGMNAAMMEEYLQFICNRRLNQLGLSEQYPGVQNPFPWMSEIMDLRKEKNFF 405

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 406 ETRVIEYQTGGALTWD 421


>gi|187925407|ref|YP_001897049.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phytofirmans PsJN]
 gi|187716601|gb|ACD17825.1| Ribonucleoside-diphosphate reductase [Burkholderia phytofirmans
           PsJN]
          Length = 415

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 280 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 340 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 400 ETRVIEYQTGGALTWE 415


>gi|94312018|ref|YP_585228.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           metallidurans CH34]
 gi|93355870|gb|ABF09959.1| Ribonucleoside-diphosphate reductase beta subunit [Cupriavidus
           metallidurans CH34]
          Length = 395

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 90/136 (66%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 260 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 319

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 320 EDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFF 379

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 380 ETRVIEYQTGGALSWD 395


>gi|313200886|ref|YP_004039544.1| ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
 gi|312440202|gb|ADQ84308.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
          Length = 381

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 84/136 (61%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A  LE  YA
Sbjct: 246 MQGAAEQYQYILRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYA 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y++FIANRR  QIG++ L+    NPFPWMSE++DLKKEKNFF
Sbjct: 306 EDTMPRGVLGLNAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFF 365

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 366 ETRVTEYQTGGALSWD 381


>gi|192360823|ref|YP_001982048.1| ribonucleotide-diphosphate reductase subunit beta [Cellvibrio
           japonicus Ueda107]
 gi|190686988|gb|ACE84666.1| ribonucleoside reductase, beta subunit [Cellvibrio japonicus
           Ueda107]
          Length = 429

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 90/136 (66%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT EFQQ+   M+ E T LEI YA
Sbjct: 294 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTAEFQQEVLQMILEGTELEIQYA 353

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            ++MP+G +G+NA   E+Y+ FIANRRC Q+GL+  F   +NPFPWMSE++DL+KEKNFF
Sbjct: 354 RDSMPRGVLGMNAAMMEEYLHFIANRRCAQLGLKEQFPGAQNPFPWMSEIMDLRKEKNFF 413

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 414 ETRVIEYQTGGALSWD 429


>gi|121595925|ref|YP_987821.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax sp.
           JS42]
 gi|222112113|ref|YP_002554377.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           ebreus TPSY]
 gi|120608005|gb|ABM43745.1| Ribonucleoside-diphosphate reductase [Acidovorax sp. JS42]
 gi|221731557|gb|ACM34377.1| Ribonucleoside-diphosphate reductase [Acidovorax ebreus TPSY]
          Length = 396

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA
Sbjct: 261 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKDEIKALFIKAVELEYRYA 320

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 321 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFF 380

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 381 ETRVIEYQSGGALSWD 396


>gi|330815478|ref|YP_004359183.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
 gi|327367871|gb|AEA59227.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
          Length = 407

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 272 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIRELFKHAVELEYRYA 331

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FIANRRC QIGL+ L+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 332 EDTMPRGVLGLNASMFKSYLRFIANRRCQQIGLDALYPNEENPFPWMSEMIDLKKERNFF 391

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 392 ETRVIEYQTGGALSWE 407


>gi|73542624|ref|YP_297144.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha JMP134]
 gi|72120037|gb|AAZ62300.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134]
          Length = 394

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 90/136 (66%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 259 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 318

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 319 EDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFF 378

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 379 ETRVIEYQTGGALSWD 394


>gi|107021673|ref|YP_620000.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia AU 1054]
 gi|116688619|ref|YP_834242.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia HI2424]
 gi|105891862|gb|ABF75027.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia AU
           1054]
 gi|116646708|gb|ABK07349.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           HI2424]
          Length = 382

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 247 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 307 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 366

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 367 ETRVIEYQTGGALSWE 382


>gi|253998799|ref|YP_003050862.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
 gi|253985478|gb|ACT50335.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
          Length = 383

 Score =  217 bits (555), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 84/136 (61%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN +K+ENPHLWT EF+++ + ++ +A  LE  YA
Sbjct: 248 MQGAAEQYQYILRDESMHCNFGIDLINTLKLENPHLWTPEFREEIKRLMQQAVELEYRYA 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y++FIANRR  QIG++ L+    NPFPWMSE++DLKKEKNFF
Sbjct: 308 EDTMPRGVLGLNAAMFKEYLRFIANRRMQQIGIDALYPGASNPFPWMSEMMDLKKEKNFF 367

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 368 ETRVTEYQTGGALSWD 383


>gi|206561765|ref|YP_002232530.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia J2315]
 gi|254246390|ref|ZP_04939711.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|124871166|gb|EAY62882.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|198037807|emb|CAR53751.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           cenocepacia J2315]
          Length = 403

 Score =  217 bits (554), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|221202418|ref|ZP_03575450.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
 gi|221208122|ref|ZP_03581127.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221172025|gb|EEE04467.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221177695|gb|EEE10110.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
          Length = 372

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 237 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 297 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 356

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 357 ETRVIEYQTGGALSWE 372


>gi|186477386|ref|YP_001858856.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phymatum STM815]
 gi|184193845|gb|ACC71810.1| Ribonucleoside-diphosphate reductase [Burkholderia phymatum STM815]
          Length = 407

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 272 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTPEFRAEIREIFKHAVDLEYRYA 331

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIG++PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 332 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGIDPLYPNEENPFPWMSEMIDLKKERNFF 391

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 392 ETRVIEYQTGGALSWE 407


>gi|325519933|gb|EGC99191.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           TJI49]
          Length = 403

 Score =  217 bits (554), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|307546480|ref|YP_003898959.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
 gi|307218504|emb|CBV43774.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
          Length = 415

 Score =  217 bits (553), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 90/136 (66%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFG+D+INQIKIENPHLWT EFQ +   M+ E T LEIAYA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGVDMINQIKIENPHLWTPEFQDECTQMILEGTELEIAYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            ++MP+G +G+NA   E+Y+ FI NRR  QIGL+  F   +NPFPWMSE+IDL+KEKNFF
Sbjct: 340 RDSMPRGVLGMNAAIMEEYLHFICNRRLAQIGLKEQFPGAQNPFPWMSEIIDLRKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 400 ETRVTEYQVGGALSWD 415


>gi|170695324|ref|ZP_02886470.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
 gi|170139724|gb|EDT07906.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
          Length = 414

 Score =  217 bits (553), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 279 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYA 338

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 339 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 398

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 399 ETRVIEYQTGGALTWE 414


>gi|187479453|ref|YP_787478.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella avium
           197N]
 gi|115424040|emb|CAJ50593.1| ribonucleoside-diphosphate reductase beta chain [Bordetella avium
           197N]
          Length = 394

 Score =  216 bits (552), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA
Sbjct: 259 MTGAAEQYMYILRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYA 318

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFF
Sbjct: 319 EDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFF 378

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 379 ETRVIEYQTGGTLSWE 394


>gi|323527395|ref|YP_004229548.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
 gi|323384397|gb|ADX56488.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
          Length = 414

 Score =  216 bits (552), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + R +  +A  LE  YA
Sbjct: 279 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFRAEIREIFQQAVELEYRYA 338

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 339 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 398

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 399 ETRVIEYQTGGALTWE 414


>gi|299533977|ref|ZP_07047329.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
 gi|298717886|gb|EFI58891.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
          Length = 363

 Score =  216 bits (552), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +  +A  LE  YA
Sbjct: 228 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYA 287

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 288 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFF 347

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 348 ETRVIEYQTGGALSWD 363


>gi|326315613|ref|YP_004233285.1| ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372449|gb|ADX44718.1| Ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 387

 Score =  216 bits (551), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+++ + +  +A  LE  YA
Sbjct: 252 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYA 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 312 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFF 371

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 372 ETRVIEYQSGGALSWD 387


>gi|221065168|ref|ZP_03541273.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
 gi|220710191|gb|EED65559.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
          Length = 363

 Score =  216 bits (551), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +   A  LE  YA
Sbjct: 228 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQRAVELEYRYA 287

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 288 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFF 347

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 348 ETRVIEYQTGGALSWD 363


>gi|82703584|ref|YP_413150.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosospira
           multiformis ATCC 25196]
 gi|82411649|gb|ABB75758.1| Ribonucleoside-diphosphate reductase [Nitrosospira multiformis ATCC
           25196]
          Length = 408

 Score =  216 bits (551), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 90/136 (66%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGIDV+NQIK+ENPHLWTKEF+ +   ++ +A  LE  YA
Sbjct: 273 MTGSAEQYQYILRDESMHCNFGIDVVNQIKMENPHLWTKEFRSEISALMQKAVELEYRYA 332

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  ++Y+++IANRRC QIGL+ L+    NPFPWMSE+IDLKKEKNFF
Sbjct: 333 EDTMPRGVLGLNAPMFKEYLRYIANRRCQQIGLDILYPGASNPFPWMSEMIDLKKEKNFF 392

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 393 ETRVTEYQTGGVLNWD 408


>gi|121598515|ref|YP_991780.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei SAVP1]
 gi|124385654|ref|YP_001027273.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10229]
 gi|126439848|ref|YP_001060484.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 668]
 gi|126451145|ref|YP_001082790.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10247]
 gi|126453692|ref|YP_001067748.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1106a]
 gi|134280207|ref|ZP_01766918.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|166998593|ref|ZP_02264451.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|167721297|ref|ZP_02404533.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei DM98]
 gi|167740266|ref|ZP_02413040.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 14]
 gi|167817486|ref|ZP_02449166.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 91]
 gi|167847373|ref|ZP_02472881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei B7210]
 gi|167895962|ref|ZP_02483364.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 7894]
 gi|167904346|ref|ZP_02491551.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei NCTC 13177]
 gi|167912606|ref|ZP_02499697.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 112]
 gi|217420440|ref|ZP_03451945.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|226196790|ref|ZP_03792369.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813879|ref|YP_002898330.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238561262|ref|ZP_00442338.2| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242316188|ref|ZP_04815204.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|254178822|ref|ZP_04885476.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|254199038|ref|ZP_04905453.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|254202774|ref|ZP_04909137.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|254259655|ref|ZP_04950709.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
 gi|254299327|ref|ZP_04966777.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|121227325|gb|ABM49843.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei SAVP1]
 gi|124293674|gb|ABN02943.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10229]
 gi|126219341|gb|ABN82847.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 668]
 gi|126227334|gb|ABN90874.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106a]
 gi|126244015|gb|ABO07108.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10247]
 gi|134248214|gb|EBA48297.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|147747021|gb|EDK54098.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|157808756|gb|EDO85926.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|160694736|gb|EDP84744.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|169656868|gb|EDS88265.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|217395852|gb|EEC35869.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|225931050|gb|EEH27058.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237506031|gb|ACQ98349.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238524965|gb|EEP88395.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242139427|gb|EES25829.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|243065276|gb|EES47462.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|254218344|gb|EET07728.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
          Length = 403

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|33593916|ref|NP_881560.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           pertussis Tohama I]
 gi|33598411|ref|NP_886054.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           parapertussis 12822]
 gi|33603351|ref|NP_890911.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           bronchiseptica RB50]
 gi|33563990|emb|CAE43255.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           pertussis Tohama I]
 gi|33574540|emb|CAE39187.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           parapertussis]
 gi|33577475|emb|CAE34740.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           bronchiseptica RB50]
          Length = 398

 Score =  216 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA
Sbjct: 263 MTGAAEQYMYILRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRELFRKAVELEYAYA 322

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRRC QIG+EPLF   ENPFPWM+E+IDLKKE+NFF
Sbjct: 323 EDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLFPQEENPFPWMAEMIDLKKERNFF 382

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 383 ETRVIEYQTGGTLSWE 398


>gi|91787004|ref|YP_547956.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas sp.
           JS666]
 gi|91696229|gb|ABE43058.1| Ribonucleoside-diphosphate reductase [Polaromonas sp. JS666]
          Length = 406

 Score =  216 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +  +A  LE  YA
Sbjct: 271 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFLKAVELEYRYA 330

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 331 EDTMPRGVLGLNASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFF 390

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 391 ETRVIEYQSGGALSWD 406


>gi|312795100|ref|YP_004028022.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           rhizoxinica HKI 454]
 gi|312166875|emb|CBW73878.1| Ribonucleoside-diphosphate reductase beta chain (EC 1.17.4.1)
           [Burkholderia rhizoxinica HKI 454]
          Length = 416

 Score =  216 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT  F+++   +   A  LE  YA
Sbjct: 281 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTPAFREEICGLFKHAVELEYRYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGLEPLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 341 EDTMPRGVLGLNAGMFKSYLRFICNRRCQQIGLEPLFPNEENPFPWMSEMIDLKKERNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 401 ETRVIEYQTGGALSWE 416


>gi|289208615|ref|YP_003460681.1| ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
 gi|288944246|gb|ADC71945.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
          Length = 412

 Score =  216 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 90/136 (66%), Positives = 112/136 (82%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+H+NFGIDVINQIK+ENPHLWT+EF+ + RT++ +A  LE  YA
Sbjct: 277 MTGVAEQFQYILRDESMHMNFGIDVINQIKVENPHLWTEEFKNEMRTLISDAVELEAQYA 336

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+ FIANRRC QIGL  ++   +NPFPWMSEV+DLKKEKNFF
Sbjct: 337 RDTMPRGVLGMNAQMFEEYLHFIANRRCAQIGLAEMYPGADNPFPWMSEVLDLKKEKNFF 396

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 397 ETRVTEYQTGGALSWD 412


>gi|17547523|ref|NP_520925.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           solanacearum GMI1000]
 gi|17429827|emb|CAD16511.1| putative transmembrane ribonucleoside reductase (small chain)
           oxidoreductase protein [Ralstonia solanacearum GMI1000]
          Length = 400

 Score =  215 bits (549), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 265 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 324

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   +NPFPWMSE+IDLKKE+NFF
Sbjct: 325 EDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFF 384

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 385 ETRVIEYQTGGALSWD 400


>gi|299065648|emb|CBJ36820.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CMR15]
          Length = 398

 Score =  215 bits (549), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 263 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 322

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   +NPFPWMSE+IDLKKE+NFF
Sbjct: 323 EDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDALFPNEDNPFPWMSEMIDLKKERNFF 382

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 383 ETRVIEYQTGGALSWD 398


>gi|163854887|ref|YP_001629185.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           petrii DSM 12804]
 gi|163258615|emb|CAP40914.1| ribonucleoside-diphosphate reductase beta chain [Bordetella petrii]
          Length = 396

 Score =  215 bits (549), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA
Sbjct: 261 MTGAAEQYMYILRDESMHCNFGIDLINTIKLENPHLWTPEFREEIRGLFQKAVELEYAYA 320

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFF
Sbjct: 321 EDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFF 380

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 381 ETRVIEYQTGGTLSWE 396


>gi|319791701|ref|YP_004153341.1| ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
 gi|315594164|gb|ADU35230.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
          Length = 411

 Score =  215 bits (549), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 85/136 (62%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENP LWT EF+ + + +   A  LE  YA
Sbjct: 276 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKDLFMRAVELEYKYA 335

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 336 EDTMPRGVLGMNASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFF 395

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 396 ETRVIEYQSGGALSWD 411


>gi|88705571|ref|ZP_01103281.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
 gi|88700084|gb|EAQ97193.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
          Length = 469

 Score =  215 bits (549), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 90/136 (66%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENP LWT+EF+Q++  M+ E T LEI YA
Sbjct: 334 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPQLWTEEFKQEAIQMILEGTQLEIEYA 393

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFIANRR  QIGL   F   +NPFPWMSE++DL+KEKNFF
Sbjct: 394 RDTMPRGVLGMNAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFF 453

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 454 ETRVIEYQTGGALSWD 469


>gi|72163401|ref|YP_291058.1| ribonucleotide-diphosphate reductase subunit beta [Thermobifida
           fusca YX]
 gi|71917133|gb|AAZ57035.1| ribonucleoside-diphosphate reductase [Thermobifida fusca YX]
          Length = 354

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 103/136 (75%), Positives = 116/136 (85%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIKIENPHLWT+EFQ + RTML EA  LE AY 
Sbjct: 219 MVGIAEQYQYILRDESIHLNFGIDVINQIKIENPHLWTEEFQDEVRTMLIEACELEAAYG 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            ETMP+G +GLNA  CEQYM+FI +RR  Q+GL P+F  TENPFPWMSE++DLKKEKNFF
Sbjct: 279 RETMPRGILGLNAKLCEQYMRFITDRRAEQLGLAPIFGETENPFPWMSEMMDLKKEKNFF 338

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G+GL WD
Sbjct: 339 ETRVIEYQTGSGLSWD 354


>gi|83719302|ref|YP_441701.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
 gi|83653127|gb|ABC37190.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           thailandensis E264]
          Length = 377

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 242 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 302 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 361

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 362 ETRVIEYQTGGALSWE 377


>gi|76808925|ref|YP_334881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1710b]
 gi|254208116|ref|ZP_04914466.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
 gi|76578378|gb|ABA47853.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei 1710b]
 gi|147752010|gb|EDK59077.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
          Length = 376

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 241 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 300

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 301 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 360

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 361 ETRVIEYQTGGALSWE 376


>gi|297538242|ref|YP_003674011.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
 gi|297257589|gb|ADI29434.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
          Length = 376

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGIDVIN IK+ENPHLWT EF+++ +T++ +   LE  YA
Sbjct: 241 MQGAAEQYQYILRDESMHCNFGIDVINTIKLENPHLWTAEFREEIKTLMQKGVELEYQYA 300

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             TMP+G +GLNA   ++Y++FIANRRC QIGL+ L+    NPFPWMSE++DLKKEKNFF
Sbjct: 301 EATMPRGVLGLNATMFKEYLRFIANRRCTQIGLDVLYPGATNPFPWMSEMMDLKKEKNFF 360

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 361 ETRVTEYQTGGALSWD 376


>gi|254780845|ref|YP_003065258.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254780964|ref|YP_003065377.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040522|gb|ACT57318.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040641|gb|ACT57437.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 352

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 135/136 (99%), Positives = 135/136 (99%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA
Sbjct: 217 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 276

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF
Sbjct: 277 HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 336

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQQGA LKWD
Sbjct: 337 ETRVTEYQQGAELKWD 352


>gi|253997287|ref|YP_003049351.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
 gi|253983966|gb|ACT48824.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
          Length = 377

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGIDVIN IK+ENPHLWT EF+ + + ++     LE  YA
Sbjct: 242 MQGAAEQYQYILRDESMHCNFGIDVINTIKLENPHLWTAEFRDEIKGLIQHGVELEYRYA 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             TMP+G +GLNA   ++Y++FIANRRC QIGL+ L++   NPFPWMSE+IDLKKEKNFF
Sbjct: 302 EATMPRGVLGLNATMFKEYLRFIANRRCQQIGLDVLYQGATNPFPWMSEMIDLKKEKNFF 361

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 362 ETRVTEYQTGGALSWD 377


>gi|226945386|ref|YP_002800459.1| ribonucleotide-diphosphate reductase subunit beta [Azotobacter
           vinelandii DJ]
 gi|226720313|gb|ACO79484.1| Ribonucleoside-diphosphate reductase beta subunit [Azotobacter
           vinelandii DJ]
          Length = 416

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA
Sbjct: 281 MTGTAEQFQYILRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  Q+GL   +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNATMMEDYLKFIANRRLSQLGLPEQYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|254516739|ref|ZP_05128798.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
 gi|219675162|gb|EED31529.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
          Length = 441

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 91/136 (66%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT+EF+Q++  M+ E T LEI YA
Sbjct: 306 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTEEFKQEAIQMILEGTQLEIEYA 365

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFIANRR  QIGL   F   +NPFPWMSE++DL+KEKNFF
Sbjct: 366 RDTMPRGVLGMNAAMMEEYLQFIANRRLSQIGLPEQFPGVQNPFPWMSEIMDLRKEKNFF 425

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 426 ETRVIEYQTGGALSWD 441


>gi|167574685|ref|ZP_02367559.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis C6786]
          Length = 369

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 234 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 293

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 294 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 353

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 354 ETRVIEYQTGGALSWE 369


>gi|194290770|ref|YP_002006677.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           taiwanensis LMG 19424]
 gi|193224605|emb|CAQ70616.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Cupriavidus taiwanensis LMG 19424]
          Length = 396

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 90/136 (66%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 261 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 320

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 321 EDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLDQLFPNEENPFPWMSEMIDLKKERNFF 380

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 381 ETRVIEYQTGGALSWD 396


>gi|167586060|ref|ZP_02378448.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ubonensis Bu]
          Length = 403

 Score =  214 bits (547), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKQAVDLEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI NRRC QIGL+PL+   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKSYLRFICNRRCQQIGLDPLYPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 388 ETRVIEYQTGGALSWE 403


>gi|226940720|ref|YP_002795794.1| ribonucleotide-diphosphate reductase subunit beta [Laribacter
           hongkongensis HLHK9]
 gi|226715647|gb|ACO74785.1| Ribonucleoside-diphosphate reductase beta chain [Laribacter
           hongkongensis HLHK9]
          Length = 357

 Score =  214 bits (547), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 92/136 (67%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN IK ENPHLWT EFQ++   +  +A  LE AYA
Sbjct: 222 MTGAAEQYQYILRDESMHCNFGIDLINSIKQENPHLWTVEFQEELYGLFRKAIDLEYAYA 281

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y+ FIANRR  QIGLEPLF + +NPFPWMSE+IDLKKEKNFF
Sbjct: 282 EDTMPRGVLGLNAAMFKEYLDFIANRRMQQIGLEPLFTHVDNPFPWMSEMIDLKKEKNFF 341

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 342 ETRVTEYQSGGALDWD 357


>gi|167825888|ref|ZP_02457359.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 9]
 gi|167924622|ref|ZP_02511713.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei BCC215]
 gi|254180586|ref|ZP_04887184.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
 gi|254190977|ref|ZP_04897483.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157938651|gb|EDO94321.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|184211125|gb|EDU08168.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
          Length = 372

 Score =  214 bits (547), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 237 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 297 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 356

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 357 ETRVIEYQTGGALSWE 372


>gi|292490774|ref|YP_003526213.1| ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
 gi|291579369|gb|ADE13826.1| Ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
          Length = 415

 Score =  214 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 93/136 (68%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYIMRDES+H+NFGIDVINQIKIENPHLWT  F+Q++  M+ EA  LE  YA
Sbjct: 280 MTGTAEQFQYIMRDESMHMNFGIDVINQIKIENPHLWTDSFKQETIQMIREAVSLETQYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           ++TMP+G +GLNAP  ++Y++FIANRRC QIGL   +    NPFPWMSE++DLKKEKNFF
Sbjct: 340 YDTMPRGVLGLNAPMFDEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEILDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  LKWD
Sbjct: 400 ETRVTEYQTGGALKWD 415


>gi|330430727|gb|AEC22061.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp.
           T7-7]
          Length = 387

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN IK+ENPHLWT EF+++ R +  +A  LE AYA
Sbjct: 252 MTGAAEQYMYILRDESMHCNFGIDLINTIKLENPHLWTAEFREELRELFKKAVDLEYAYA 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FIANRRC QIGLEPLF   ENPFPWM+E+IDLKKE+NFF
Sbjct: 312 EDTMPRGVLGLNASMFKSYLRFIANRRCQQIGLEPLFGQEENPFPWMAEMIDLKKERNFF 371

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 372 ETRVIEYQTGGALSWE 387


>gi|264680215|ref|YP_003280125.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
 gi|262210731|gb|ACY34829.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
          Length = 336

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+Q+   +  +A  LE  YA
Sbjct: 201 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKQEITELFQKAVELEYRYA 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 261 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEELFPGEENPFPWMSEMIDLKKERNFF 320

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 321 ETRVIEYQTGGALSWD 336


>gi|239813962|ref|YP_002942872.1| ribonucleotide-diphosphate reductase subunit beta [Variovorax
           paradoxus S110]
 gi|239800539|gb|ACS17606.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus S110]
          Length = 391

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 85/136 (62%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENP LWT EF+ + + +  +A  LE  YA
Sbjct: 256 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPGLWTPEFKAEIKALFLKAVELEYKYA 315

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 316 EDTMPRGVLGMNASMFKGYLRYIANRRAQQIGLETLFPNEENPFPWMSEMIDLKKERNFF 375

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 376 ETRVIEYQSGGALSWD 391


>gi|167564160|ref|ZP_02357076.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis EO147]
          Length = 369

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 234 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 293

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 294 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 353

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 354 ETRVIEYQTGGALSWE 369


>gi|110635036|ref|YP_675244.1| ribonucleotide-diphosphate reductase subunit beta [Mesorhizobium
           sp. BNC1]
 gi|110286020|gb|ABG64079.1| ribonucleotide reductase [Chelativorans sp. BNC1]
          Length = 369

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 102/136 (75%), Positives = 113/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIK ENPHLWT EFQ++ R ML +A  LE AY 
Sbjct: 234 MVGIAEQYQYILRDESIHLNFGIDVINQIKHENPHLWTPEFQEELRRMLKDAAELEAAYG 293

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CEQYM FIANRRC Q+GL P+F  TENPFPWMSE +DLKKEKNFF
Sbjct: 294 RDTMPRGFLGLNAGQCEQYMHFIANRRCAQLGLPPVFPETENPFPWMSEAMDLKKEKNFF 353

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 354 ETRVIEYQNGGALSWD 369


>gi|241664219|ref|YP_002982579.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12D]
 gi|309783064|ref|ZP_07677783.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
 gi|240866246|gb|ACS63907.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|308918172|gb|EFP63850.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
          Length = 402

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 387 ETRVIEYQTGGALSWE 402


>gi|317402620|gb|EFV83180.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans C54]
          Length = 399

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN +K+ENPHLWT EF+++ R +  +A  LE AYA
Sbjct: 264 MTGAAEQYMYILRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYA 323

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFF
Sbjct: 324 EDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFF 383

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 384 ETRVIEYQTGGTLSWE 399


>gi|332110818|gb|EGJ10995.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax
           benzoatilyticus JA2]
          Length = 385

 Score =  214 bits (546), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 85/136 (62%), Positives = 103/136 (75%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT  F+ + R +   A  LE  YA
Sbjct: 250 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTPAFKAEIRALFERAVELEYRYA 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 310 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFF 369

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV +YQ G  L WD
Sbjct: 370 ETRVIDYQSGGALSWD 385


>gi|120609557|ref|YP_969235.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           citrulli AAC00-1]
 gi|120588021|gb|ABM31461.1| Ribonucleoside-diphosphate reductase [Acidovorax citrulli AAC00-1]
          Length = 387

 Score =  214 bits (545), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+++ + +  +A  LE  YA
Sbjct: 252 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKEEIKGLFMKAVELEYQYA 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 312 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFF 371

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 372 ETRVIEYQSGGALSWD 387


>gi|241764092|ref|ZP_04762129.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
 gi|241366556|gb|EER61044.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
          Length = 398

 Score =  214 bits (545), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENPHLWT EF+ + + +   A  LE  YA
Sbjct: 263 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPHLWTAEFKAEIKALFMRAVELEYRYA 322

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 323 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFF 382

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 383 ETRVIEYQSGGALSWD 398


>gi|89902117|ref|YP_524588.1| ribonucleotide-diphosphate reductase subunit beta [Rhodoferax
           ferrireducens T118]
 gi|89346854|gb|ABD71057.1| Ribonucleoside-diphosphate reductase [Rhodoferax ferrireducens
           T118]
          Length = 400

 Score =  214 bits (545), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 85/136 (62%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENP LWT EF+ + + +  +A  LE  YA
Sbjct: 265 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPQLWTSEFKAEIKALFEQAVELEYRYA 324

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 325 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFF 384

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 385 ETRVIEYQSGGALSWD 400


>gi|149927167|ref|ZP_01915424.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
 gi|149824106|gb|EDM83327.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
          Length = 399

 Score =  214 bits (545), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 82/136 (60%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G AEQ+QYI+RDES H  FGID+IN +K+ENPHLWT EF+++ + M  +A  LE AYA
Sbjct: 264 MIGAAEQFQYILRDESAHCTFGIDLINTVKLENPHLWTPEFKEEIKAMFRKAVELEHAYA 323

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLN+    +YM+FI NRR +QIGL  L++   NPFPWMSE++DLKKE NFF
Sbjct: 324 VDTMPRGVLGLNSAQFMEYMKFICNRRSNQIGLGTLYEGATNPFPWMSEMMDLKKETNFF 383

Query: 121 ETRVTEYQQGAGLKWD 136
           E RVTEYQ G  L WD
Sbjct: 384 ERRVTEYQTGGALSWD 399


>gi|187930114|ref|YP_001900601.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12J]
 gi|187727004|gb|ACD28169.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12J]
          Length = 402

 Score =  214 bits (545), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 387 ETRVIEYQTGGALSWE 402


>gi|325983070|ref|YP_004295472.1| ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
 gi|325532589|gb|ADZ27310.1| Ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
          Length = 381

 Score =  214 bits (545), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGIDVINQIK+ENP LWTK F+++   ++ +A  LE  YA
Sbjct: 246 MTGSAEQYQYILRDESMHCNFGIDVINQIKMENPQLWTKAFREEIAALMQKAVALEYRYA 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NAP  ++Y+++IANRRC QIGL+ L+    NPFPWMSE++DLKKEKNFF
Sbjct: 306 EDTMPRGVLGMNAPMFKEYLRYIANRRCQQIGLDTLYPNANNPFPWMSEMMDLKKEKNFF 365

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 366 ETRVTEYQTGGALSWD 381


>gi|124268397|ref|YP_001022401.1| ribonucleotide-diphosphate reductase subunit beta [Methylibium
           petroleiphilum PM1]
 gi|124261172|gb|ABM96166.1| Ribonucleoside-diphosphate reductase [Methylibium petroleiphilum
           PM1]
          Length = 403

 Score =  214 bits (545), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT EF+ + + +  +A  LE  YA
Sbjct: 268 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTAEFKAEIKALFMKAVELEYRYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 328 EDTMPRGVLGLNASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 388 ETRVIEYQSGGALSWD 403


>gi|300690381|ref|YP_003751376.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
 gi|299077441|emb|CBJ50067.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
          Length = 402

 Score =  213 bits (544), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKAEITELFKKAVDLEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FI NRRC QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDALFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 387 ETRVIEYQTGGALSWE 402


>gi|331006663|ref|ZP_08329944.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
 gi|330419531|gb|EGG93916.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
          Length = 444

 Score =  213 bits (544), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIK+ENPHLWT+EF+ +   M+ E T LEIAYA
Sbjct: 309 MTGVAEQFQYILRDESMHLNFGIDIINQIKLENPHLWTEEFKAEVTQMVLEGTELEIAYA 368

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFI+NRR  Q+GL   +   +NPFPWMSE++DL+KEKNFF
Sbjct: 369 RDTMPRGVLGMNAAMMEEYLQFISNRRLAQLGLTEQYPGAQNPFPWMSEIMDLRKEKNFF 428

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 429 ETRVIEYQTGGALTWE 444


>gi|53804295|ref|YP_114081.1| ribonucleotide-diphosphate reductase subunit beta [Methylococcus
           capsulatus str. Bath]
 gi|53758056|gb|AAU92347.1| ribonucleoside-diphosphate reductase, beta subunit [Methylococcus
           capsulatus str. Bath]
          Length = 403

 Score =  213 bits (544), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 91/136 (66%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYIMRDES+H+NFGIDVINQIK+ENPHLWT  F+ +   M+ EA  +E  YA
Sbjct: 268 MTGTAEQFQYIMRDESMHMNFGIDVINQIKVENPHLWTDGFKVEMVQMIREAVDIETQYA 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           ++TMP+G +GLNAP  ++Y+QFIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFF
Sbjct: 328 YDTMPRGILGLNAPMFKEYLQFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 388 ETRVTEYQTGGTLSWD 403


>gi|300113307|ref|YP_003759882.1| ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
 gi|299539244|gb|ADJ27561.1| Ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
          Length = 412

 Score =  213 bits (544), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 93/136 (68%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYIMRDES+H+NFGIDVINQIK+ENPHLW+  F+Q++  M+ EA  LE  YA
Sbjct: 277 MTGTAEQFQYIMRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYA 336

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           H+TMP+G +GLNAP  E+Y++FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFF
Sbjct: 337 HDTMPRGVLGLNAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFF 396

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 397 ETRVTEYQTGGALSWD 412


>gi|330811278|ref|YP_004355740.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379386|gb|AEA70736.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 415

 Score =  213 bits (543), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|90022104|ref|YP_527931.1| ribonucleotide-diphosphate reductase subunit beta [Saccharophagus
           degradans 2-40]
 gi|89951704|gb|ABD81719.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 423

 Score =  213 bits (543), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT+EFQ +++ M+ E T LEIAYA
Sbjct: 288 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTEEFQAETKQMILEGTELEIAYA 347

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+ FIANRR  Q+GL   +   +NPFPWMSE++DL+KEKNFF
Sbjct: 348 RDTMPRGVLGMNAAMMEEYLHFIANRRMAQLGLAEAYPGAKNPFPWMSEIMDLRKEKNFF 407

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 408 ETRVIEYQTGGALSWE 423


>gi|70731866|ref|YP_261608.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf-5]
 gi|68346165|gb|AAY93771.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Pseudomonas fluorescens Pf-5]
          Length = 415

 Score =  213 bits (543), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|134097869|ref|YP_001103530.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291007412|ref|ZP_06565385.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133910492|emb|CAM00605.1| ribonucleoside-diphosphate reductase, beta subunit
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 360

 Score =  213 bits (543), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 101/136 (74%), Positives = 114/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGID INQIKIENPHLWT EFQ++ RTML EA  LE+AY 
Sbjct: 225 MVGIAEQYQYILRDESIHLNFGIDCINQIKIENPHLWTPEFQEEVRTMLTEACELEVAYG 284

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA  CE+YM+FI NRRC Q+GLEP+F  T NPFPWMSE +DLKKEKNFF
Sbjct: 285 RDTMPRGILGLNAGLCEEYMRFITNRRCAQLGLEPVFPETANPFPWMSEAMDLKKEKNFF 344

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 345 ETRVIEYQSGGALDWD 360


>gi|53720599|ref|YP_109585.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei K96243]
 gi|53726102|ref|YP_104055.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei ATCC 23344]
 gi|52211013|emb|CAH37001.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei K96243]
 gi|52429525|gb|AAU50118.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 23344]
          Length = 350

 Score =  213 bits (543), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 215 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 274

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 275 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 334

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 335 ETRVIEYQTGGALSWE 350


>gi|167580513|ref|ZP_02373387.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis TXDOH]
 gi|167618621|ref|ZP_02387252.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis Bt4]
 gi|257137870|ref|ZP_05586132.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
          Length = 350

 Score =  213 bits (543), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 215 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 274

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 275 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 334

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 335 ETRVIEYQTGGALSWE 350


>gi|171057074|ref|YP_001789423.1| ribonucleotide-diphosphate reductase subunit beta [Leptothrix
           cholodnii SP-6]
 gi|170774519|gb|ACB32658.1| Ribonucleoside-diphosphate reductase [Leptothrix cholodnii SP-6]
          Length = 402

 Score =  213 bits (543), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN IK+ENPHLWT  F+ + + +  +A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESMHCNFGIDLINAIKLENPHLWTPAFKAEIKALFLKAVELEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNASMFKGYLRYIANRRATQIGLEELFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 387 ETRVIEYQSGGALSWD 402


>gi|329893650|ref|ZP_08269784.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
 gi|328923577|gb|EGG30889.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
          Length = 432

 Score =  213 bits (543), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT++FQ++   ML E T +EI YA
Sbjct: 297 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTEDFQKEVIQMLLEGTQIEIEYA 356

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFI NRR  Q+GL   F   +NPFPWMSE++DL+KEKNFF
Sbjct: 357 RDTMPRGVLGMNAAMMEEYLQFICNRRLAQLGLPEQFPGVQNPFPWMSEIMDLRKEKNFF 416

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 417 ETRVIEYQTGGALSWD 432


>gi|330892405|gb|EGH25066.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 415

 Score =  212 bits (542), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|327480258|gb|AEA83568.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri DSM 4166]
          Length = 415

 Score =  212 bits (542), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA
Sbjct: 280 MTGTAEQFQYILRDESMHLNFGIDMINQIKIENPHLWNAEMKDEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|158341282|ref|YP_001522354.1| ribonucleotide-diphosphate reductase subunit beta [Acaryochloris
           marina MBIC11017]
 gi|158311523|gb|ABW33134.1| ribonucleoside-diphosphate reductase, beta subunit [Acaryochloris
           marina MBIC11017]
          Length = 384

 Score =  212 bits (542), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 85/136 (62%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID++N IK ENPHLWT EF ++ R +   A  LE  YA
Sbjct: 249 MTGAAEQYQYILRDESMHCNFGIDLVNAIKQENPHLWTPEFCEEIRDLFKRAVELEYRYA 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+++IANRR  QIGL+P+F   ENPFPWMSE++DLKKE+NFF
Sbjct: 309 EDTMPRGVLGLNASMFKSYLRYIANRRSQQIGLDPIFASEENPFPWMSEMVDLKKERNFF 368

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 369 ETRVLEYQTGGALSWD 384


>gi|209885874|ref|YP_002289731.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
 gi|209874070|gb|ACI93866.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
          Length = 377

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 103/136 (75%), Positives = 113/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIK+ENPHLWTK FQ + R M+ EA  LE AY 
Sbjct: 242 MVGIAEQYQYILRDESIHLNFGIDVINQIKLENPHLWTKAFQDEVRGMISEAAGLEAAYG 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CEQYM FIANRRC QIGL P+F  TENPFPWMSE +DLKKEKNFF
Sbjct: 302 RDTMPRGFLGLNAALCEQYMHFIANRRCAQIGLAPVFAETENPFPWMSEAMDLKKEKNFF 361

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 362 ETRVIEYQNGGALSWD 377


>gi|160896947|ref|YP_001562529.1| ribonucleotide-diphosphate reductase subunit beta [Delftia
           acidovorans SPH-1]
 gi|160362531|gb|ABX34144.1| Ribonucleoside-diphosphate reductase [Delftia acidovorans SPH-1]
          Length = 363

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 85/136 (62%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENP LWT EF+++   +  +A  LE  YA
Sbjct: 228 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPQLWTPEFKEEITALFVKAVELEYRYA 287

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 288 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLEALFPNEENPFPWMSEMIDLKKERNFF 347

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 348 ETRVIEYQTGGALSWD 363


>gi|148546452|ref|YP_001266554.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida F1]
 gi|148510510|gb|ABQ77370.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida F1]
          Length = 415

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|28868867|ref|NP_791486.1| ribonucleoside-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213969520|ref|ZP_03397656.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|301385974|ref|ZP_07234392.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058701|ref|ZP_07250242.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato K40]
 gi|302134408|ref|ZP_07260398.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28852106|gb|AAO55181.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213925616|gb|EEB59175.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|330960626|gb|EGH60886.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. maculicola str. ES4326]
 gi|331016758|gb|EGH96814.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 415

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|66046950|ref|YP_236791.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae B728a]
 gi|237798938|ref|ZP_04587399.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|237806191|ref|ZP_04592895.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|63257657|gb|AAY38753.1| Ribonucleoside-diphosphate reductase [Pseudomonas syringae pv.
           syringae B728a]
 gi|330980156|gb|EGH78342.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aptata str. DSM 50252]
 gi|331021792|gb|EGI01849.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331027304|gb|EGI07359.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 415

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|311103857|ref|YP_003976710.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
 gi|310758546|gb|ADP13995.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
          Length = 399

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN +K+ENPHLWT EF+++ R +  +A  LE AYA
Sbjct: 264 MTGAAEQYMYILRDESMHCNFGIDLINTVKLENPHLWTPEFREEIRELFRKAVELEYAYA 323

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFF
Sbjct: 324 EDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFF 383

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 384 ETRVIEYQTGGTLSWE 399


>gi|312960686|ref|ZP_07775192.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
 gi|311285212|gb|EFQ63787.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
          Length = 416

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|320323423|gb|EFW79511.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320327620|gb|EFW83632.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330876273|gb|EGH10422.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 415

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|330880140|gb|EGH14289.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
 gi|330966559|gb|EGH66819.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 415

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|71737432|ref|YP_275887.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|257485935|ref|ZP_05639976.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289628680|ref|ZP_06461634.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289648392|ref|ZP_06479735.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298487941|ref|ZP_07005980.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|302184861|ref|ZP_07261534.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae 642]
 gi|71557985|gb|AAZ37196.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298157492|gb|EFH98573.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330866023|gb|EGH00732.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330896997|gb|EGH28545.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. japonica str. M301072PT]
 gi|330986742|gb|EGH84845.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331010341|gb|EGH90397.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 415

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|77165986|ref|YP_344511.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosococcus
           oceani ATCC 19707]
 gi|254436303|ref|ZP_05049809.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
 gi|76884300|gb|ABA58981.1| Ribonucleoside-diphosphate reductase [Nitrosococcus oceani ATCC
           19707]
 gi|207087993|gb|EDZ65266.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
          Length = 412

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 93/136 (68%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYIMRDES+H+NFGIDVINQIK+ENPHLW+  F+Q++  M+ EA  LE  YA
Sbjct: 277 MTGTAEQFQYIMRDESMHMNFGIDVINQIKLENPHLWSDSFKQETLRMIQEAVSLETQYA 336

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           H+TMP+G +GLNAP  E+Y++FIANRRC QIGL   +    NPFPWMSEV+DLKKEKNFF
Sbjct: 337 HDTMPRGVLGLNAPMFEEYLKFIANRRCAQIGLPEQYPGASNPFPWMSEVLDLKKEKNFF 396

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 397 ETRVTEYQTGGALSWD 412


>gi|229590245|ref|YP_002872364.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229362111|emb|CAY49013.1| putative ribonucleoside-diphosphate reductase beta chain
           [Pseudomonas fluorescens SBW25]
          Length = 416

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|74317993|ref|YP_315733.1| ribonucleotide-diphosphate reductase subunit beta [Thiobacillus
           denitrificans ATCC 25259]
 gi|74057488|gb|AAZ97928.1| ribonucleoside-diphosphate reductase beta chain [Thiobacillus
           denitrificans ATCC 25259]
          Length = 376

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+IN IK ENPHLWT EF+ + RT++ +   LE  YA
Sbjct: 241 MTGAAEQYQYILRDESMHCNFGIDLINTIKQENPHLWTSEFKAEIRTLIQKGVELEFRYA 300

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLN+   ++Y++FI+NRRC QIGL+ +F    NPFPWM+E+IDLKKEKNFF
Sbjct: 301 EDTMPRGVLGLNSAQFKEYLRFISNRRCQQIGLDEMFPGVSNPFPWMAEMIDLKKEKNFF 360

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 361 ETRVTEYQTGGALSWD 376


>gi|293609145|ref|ZP_06691448.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
 gi|292829718|gb|EFF88080.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
          Length = 427

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|229592166|ref|YP_002874285.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229364032|emb|CAY51597.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens SBW25]
          Length = 416

 Score =  212 bits (541), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|119504228|ref|ZP_01626308.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
 gi|119459736|gb|EAW40831.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
          Length = 419

 Score =  212 bits (540), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 90/136 (66%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENP LWT EFQQ++  M+ E T LEIAYA
Sbjct: 284 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPLLWTPEFQQEAIQMILEGTELEIAYA 343

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFI NRR +Q+GL   F   +NPFPWMSE++DL+KEKNFF
Sbjct: 344 RDTMPRGVLGMNAAMMEEYLQFICNRRLNQVGLPEQFPGAQNPFPWMSEIMDLRKEKNFF 403

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 404 ETRVIEYQTGGALTWD 419


>gi|291615085|ref|YP_003525242.1| ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
 gi|291585197|gb|ADE12855.1| Ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
          Length = 382

 Score =  212 bits (540), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+HLNFG+DVINQIK+ENPHLWT  F+++ R ++ +   LE  YA
Sbjct: 247 MTGAAEQYQYILRDESMHLNFGVDVINQIKLENPHLWTPAFREEVRGLIQKGVELEYRYA 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y++FIANRRC QIG++ L++   NPFPWM+E+IDLKKEKNFF
Sbjct: 307 EDTMPRGVLGLNAGMFKEYLRFIANRRCQQIGVDMLYQGATNPFPWMAEMIDLKKEKNFF 366

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 367 ETRVTEYQTGGALSWD 382


>gi|255019898|ref|ZP_05291973.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970678|gb|EET28165.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 374

 Score =  212 bits (540), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 84/136 (61%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG AEQYQYI+RDES+H NFGID+INQIK+ENP LWT+ FQ++  +++ +   LE AYA
Sbjct: 239 MVGAAEQYQYILRDESMHCNFGIDLINQIKVENPDLWTEPFQEEIVSLIRKGVELECAYA 298

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFF
Sbjct: 299 DDTMPRGVLGLNAPIFKDYVKYIGNRRLQQLGLPVQWAGIQNPFPWMSEMMDLKKEKNFF 358

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 359 ETRVTEYQTGGALSWD 374


>gi|293603286|ref|ZP_06685715.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
 gi|292818321|gb|EFF77373.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
          Length = 398

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQY YI+RDES+H NFGID+IN +K+ENPHLWT  F+++ R +  +A  LE AYA
Sbjct: 263 MTGAAEQYMYILRDESMHCNFGIDLINTVKLENPHLWTPAFREEIRELFRKAVELEYAYA 322

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRRC QIG+EPL+   ENPFPWM+E+IDLKKE+NFF
Sbjct: 323 EDTMPRGVLGLNAPMFKSYLRFIANRRCQQIGIEPLYPQEENPFPWMAEMIDLKKERNFF 382

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 383 ETRVIEYQTGGTLSWE 398


>gi|256822964|ref|YP_003146927.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
 gi|256796503|gb|ACV27159.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
          Length = 421

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFG+D+INQIK+ENPHLWT EF+Q+   M+ E T LEI YA
Sbjct: 286 MTGVAEQFQYILRDESMHLNFGVDIINQIKLENPHLWTAEFKQEVLQMILEGTQLEIEYA 345

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFI NRR  Q+GL   FK   NPFPWMSE++DLKKEKNFF
Sbjct: 346 RDTMPRGVLGMNAGMMEEYLQFICNRRLAQLGLPEQFKNVSNPFPWMSEIMDLKKEKNFF 405

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 406 ETRVIEYQTGGALSWD 421


>gi|226227154|ref|YP_002761260.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
 gi|226090345|dbj|BAH38790.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
          Length = 371

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 100/136 (73%), Positives = 113/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIK+ENPHLW+  FQ++ R ML EA  LE+AY 
Sbjct: 236 MVGIAEQYQYILRDESIHLNFGIDVINQIKVENPHLWSAAFQEEVRQMLAEACELEVAYG 295

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CE YM FI NRRC Q+GL P+F  T+NPFPWMSE IDLKKEKNFF
Sbjct: 296 RDTMPRGFLGLNAALCETYMHFITNRRCAQLGLAPVFPETDNPFPWMSEAIDLKKEKNFF 355

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  LKWD
Sbjct: 356 ETRVIEYQNGGALKWD 371


>gi|121606275|ref|YP_983604.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas
           naphthalenivorans CJ2]
 gi|120595244|gb|ABM38683.1| Ribonucleoside-diphosphate reductase [Polaromonas naphthalenivorans
           CJ2]
          Length = 387

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENP LWT EF+ +   +  +A  LE  YA
Sbjct: 252 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPQLWTAEFKAEINALFMKAVELEYRYA 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+++IANRR  QIGLE LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 312 EDTMPRGVLGLNASMFKGYLRYIANRRATQIGLETLFPNEENPFPWMSEMIDLKKERNFF 371

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 372 ETRVIEYQSGGALSWD 387


>gi|54294662|ref|YP_127077.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Lens]
 gi|53754494|emb|CAH15978.1| hypothetical protein lpl1739 [Legionella pneumophila str. Lens]
          Length = 367

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA
Sbjct: 230 MVGTSEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYA 289

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +G+NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFF
Sbjct: 290 RDTMPHGILGMNAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFF 349

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 350 ETRVIEYQAGGTLSWD 365


>gi|297563527|ref|YP_003682501.1| ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847975|gb|ADH69995.1| Ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 360

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 100/136 (73%), Positives = 114/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIKIENPHLW++EFQ + R ML EA  LE+AY 
Sbjct: 225 MVGIAEQYQYILRDESIHLNFGIDVINQIKIENPHLWSEEFQAEVRQMLTEACELEVAYG 284

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            ETMP+G +GLNA  CE+YM FI +RR  QIGL P+F  TENPFPWMSE++DL+KEKNFF
Sbjct: 285 RETMPRGVLGLNAELCEKYMHFITDRRAEQIGLAPIFGETENPFPWMSEMMDLQKEKNFF 344

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G GL WD
Sbjct: 345 ETRVIEYQTGGGLDWD 360


>gi|325272776|ref|ZP_08139120.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
 gi|324102083|gb|EGB99585.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
          Length = 416

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|319764328|ref|YP_004128265.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|330826374|ref|YP_004389677.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
 gi|317118889|gb|ADV01378.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|329311746|gb|AEB86161.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
          Length = 396

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 83/136 (61%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQ+K+ENP LWT  F+ + + +  +A  LE  YA
Sbjct: 261 MTGAAEQYQYILRDESMHCNFGIDLINQLKLENPQLWTPAFKDEIKGLFLKAVDLEYRYA 320

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   + Y+++IANRR  QIGL+ LF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 321 EDTMPRGVLGMNASMFKGYLRYIANRRATQIGLDALFPNEENPFPWMSEMIDLKKERNFF 380

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 381 ETRVIEYQTGGALSWD 396


>gi|54297688|ref|YP_124057.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Paris]
 gi|53751473|emb|CAH12891.1| hypothetical protein lpp1739 [Legionella pneumophila str. Paris]
          Length = 367

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA
Sbjct: 230 MVGTSEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPEFKNEIIQLIREGVELEYQYA 289

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +G+NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFF
Sbjct: 290 RDTMPHGILGMNAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFF 349

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 350 ETRVIEYQAGGTLSWD 365


>gi|330504346|ref|YP_004381215.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
 gi|328918632|gb|AEB59463.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
          Length = 416

 Score =  211 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA
Sbjct: 281 MTGTAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|329902475|ref|ZP_08273120.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548767|gb|EGF33404.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 416

 Score =  211 bits (538), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG AEQYQYI+RDES+H NFGID++N IK+ENPHLWT EF+ + + +   A  LE  YA
Sbjct: 281 MVGAAEQYQYILRDESMHCNFGIDLVNTIKMENPHLWTPEFRDEIKALFLTAVELEYRYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFF
Sbjct: 341 EDTMPRGVLGLNAPMFKGYLRFIANRRAQQIGLEPMFENEENPFPWMSEMIDLKKERNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 401 ETRVIEYQTGGALSWE 416


>gi|160871658|ref|ZP_02061790.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
 gi|159120457|gb|EDP45795.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
          Length = 362

 Score =  211 bits (538), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 85/136 (62%), Positives = 101/136 (74%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT EF++    ++ E   LE  YA
Sbjct: 226 MTGTAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTPEFKRYVINLIKEGVDLEYQYA 285

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +T+P+G +GLNA     Y++FI NRR  QIGL   +    NP PWMSE+IDLKKEKNFF
Sbjct: 286 LDTLPRGILGLNANLMWDYLRFIGNRRFTQIGLAEQYPGVSNPLPWMSEIIDLKKEKNFF 345

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 346 ETRVTEYQTGGSLNWD 361


>gi|170720377|ref|YP_001748065.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida W619]
 gi|169758380|gb|ACA71696.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida W619]
          Length = 416

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|146308172|ref|YP_001188637.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina ymp]
 gi|145576373|gb|ABP85905.1| Ribonucleoside-diphosphate reductase [Pseudomonas mendocina ymp]
          Length = 416

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA
Sbjct: 281 MTGTAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|134095932|ref|YP_001101007.1| ribonucleotide-diphosphate reductase subunit beta [Herminiimonas
           arsenicoxydans]
 gi|133739835|emb|CAL62886.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Herminiimonas arsenicoxydans]
          Length = 395

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G AEQYQYI+RDES+H NFGID+IN IK+ENPHLWT +F+ + + +   A  LE  YA
Sbjct: 260 MMGAAEQYQYILRDESMHCNFGIDLINTIKLENPHLWTPQFRDEIKALFLRAVELEYRYA 319

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFF
Sbjct: 320 EDTMPRGVLGLNAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFF 379

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 380 ETRVIEYQTGGALNWE 395


>gi|77460516|ref|YP_350023.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf0-1]
 gi|77384519|gb|ABA76032.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens Pf0-1]
          Length = 416

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEASQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|254483523|ref|ZP_05096750.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
 gi|214036244|gb|EEB76924.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
          Length = 425

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENP+LWT+ FQQ+   M+ E T +EI YA
Sbjct: 290 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPNLWTETFQQEVIQMILEGTEIEIQYA 349

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+ FIANRR  Q+GL   F   +NPFPWMSE++DL+KEKNFF
Sbjct: 350 RDTMPRGVLGMNAAIMEEYLHFIANRRLSQLGLPEQFAGAQNPFPWMSEIMDLRKEKNFF 409

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 410 ETRVIEYQTGGALSWD 425


>gi|146282010|ref|YP_001172163.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri A1501]
 gi|145570215|gb|ABP79321.1| ribonucleoside reductase, small chain [Pseudomonas stutzeri A1501]
          Length = 415

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGID+INQIKIENPHLW  E + ++  M+ + T LEI YA
Sbjct: 280 MTGTAEQFQYILRDESMHLNFGIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNASMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|254784923|ref|YP_003072351.1| ribonucleotide-diphosphate reductase subunit beta [Teredinibacter
           turnerae T7901]
 gi|237687536|gb|ACR14800.1| ribonucleoside-diphosphate reductase [Teredinibacter turnerae
           T7901]
          Length = 453

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/135 (64%), Positives = 109/135 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENPHLWT+ FQQ+ + M+ E T LEI YA
Sbjct: 319 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPHLWTESFQQEVKQMVLEGTELEIGYA 378

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+ FIANRR  Q+GL+  +   +NPFPWMSE++DL+KEKNFF
Sbjct: 379 RDTMPRGVLGMNAAIMEEYLHFIANRRLAQLGLKEAYPGAQNPFPWMSEIMDLRKEKNFF 438

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ G  L W
Sbjct: 439 ETRVIEYQTGGALSW 453


>gi|169797064|ref|YP_001714857.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AYE]
 gi|213156529|ref|YP_002318190.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|215484526|ref|YP_002326761.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|239501302|ref|ZP_04660612.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
 gi|260555643|ref|ZP_05827863.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
 gi|294839369|ref|ZP_06784052.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6013113]
 gi|294859388|ref|ZP_06797157.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6013150]
 gi|301345633|ref|ZP_07226374.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB056]
 gi|301512780|ref|ZP_07238017.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB058]
 gi|301596291|ref|ZP_07241299.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB059]
 gi|169149991|emb|CAM87885.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AYE]
 gi|193076530|gb|ABO11186.2| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           baumannii ATCC 17978]
 gi|213055689|gb|ACJ40591.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|213987168|gb|ACJ57467.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|260410554|gb|EEX03852.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
          Length = 427

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|167837963|ref|ZP_02464822.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis MSMB43]
          Length = 303

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENPHLWT EF+ + R +   A  LE  YA
Sbjct: 168 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPHLWTAEFRAEIRELFKHAVDLEYRYA 227

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FI+NRRC QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 228 EDTMPRGVLGLNASMFKSYLRFISNRRCQQIGLDPLFPNEENPFPWMSEMIDLKKERNFF 287

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 288 ETRVIEYQTGGALSWE 303


>gi|184157022|ref|YP_001845361.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ACICU]
 gi|183208616|gb|ACC56014.1| Ribonucleotide reductase, beta subunit [Acinetobacter baumannii
           ACICU]
          Length = 427

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|104780527|ref|YP_607025.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           entomophila L48]
 gi|95109514|emb|CAK14215.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           entomophila L48]
          Length = 415

 Score =  211 bits (537), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|26987912|ref|NP_743337.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida KT2440]
 gi|167035231|ref|YP_001670462.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida GB-1]
 gi|24982621|gb|AAN66801.1|AE016309_3 ribonucleoside reductase, beta subunit [Pseudomonas putida KT2440]
 gi|166861719|gb|ABZ00127.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida GB-1]
 gi|313497534|gb|ADR58900.1| NrdB [Pseudomonas putida BIRD-1]
          Length = 416

 Score =  211 bits (537), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW    ++++  M+ + T LEI YA
Sbjct: 281 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAAMKEEATQMILQGTQLEIEYA 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 341 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQTGGALSWD 416


>gi|15596352|ref|NP_249846.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAO1]
 gi|107100605|ref|ZP_01364523.1| hypothetical protein PaerPA_01001630 [Pseudomonas aeruginosa PACS2]
 gi|116049087|ref|YP_792111.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|152988648|ref|YP_001349579.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PA7]
 gi|218892881|ref|YP_002441750.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa LESB58]
 gi|254239525|ref|ZP_04932847.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|296390475|ref|ZP_06879950.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAb1]
 gi|313106126|ref|ZP_07792381.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
 gi|9947077|gb|AAG04544.1|AE004545_7 NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa PAO1]
 gi|115584308|gb|ABJ10323.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126192903|gb|EAZ56966.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|150963806|gb|ABR85831.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa PA7]
 gi|187939552|gb|ACD38699.1| ribonucleoside reductase small chain [Pseudomonas aeruginosa]
 gi|218773109|emb|CAW28921.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa LESB58]
 gi|310878883|gb|EFQ37477.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
          Length = 415

 Score =  211 bits (537), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  + + ++  M+ + T LEI YA
Sbjct: 280 MTGTAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 340 RDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 399

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 400 ETRVIEYQTGGALSWD 415


>gi|260551040|ref|ZP_05825245.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
 gi|260405988|gb|EEW99475.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
          Length = 427

 Score =  211 bits (537), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|324998522|ref|ZP_08119634.1| ribonucleoside-diphosphate reductase beta chain [Pseudonocardia sp.
           P1]
          Length = 358

 Score =  211 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 97/136 (71%), Positives = 114/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG+AEQYQYI+RDES+HLNFGID INQIKIENPHLWT+EF  + R MLHEA  LE+AYA
Sbjct: 223 MVGVAEQYQYILRDESIHLNFGIDCINQIKIENPHLWTEEFAAEIRAMLHEACELEVAYA 282

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GL A SCEQY++FI +RR  QIGL PLF   +NPFPWMSE +DL+KEKNFF
Sbjct: 283 RDTMPRGMLGLTAESCEQYLRFITDRRAEQIGLAPLFGQADNPFPWMSEAMDLRKEKNFF 342

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEY+ G  L+WD
Sbjct: 343 ETRVTEYRTGGSLEWD 358


>gi|50083944|ref|YP_045454.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. ADP1]
 gi|49529920|emb|CAG67632.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           sp. ADP1]
          Length = 427

 Score =  211 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 85/135 (62%), Positives = 108/135 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++EQ+QYI+RDES+H+NFGID+INQIKIENPHLWT EFQQ+   M+ E TLLEI YA
Sbjct: 293 MNGVSEQFQYILRDESMHVNFGIDMINQIKIENPHLWTAEFQQEVIQMIVEGTLLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   ++   NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNAAMMEEYLKFICNRRLAQLGLPEQYRGVNNPFQWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|169634186|ref|YP_001707922.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii SDF]
 gi|169152978|emb|CAP02026.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii]
          Length = 427

 Score =  210 bits (536), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|262373382|ref|ZP_06066661.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
 gi|262313407|gb|EEY94492.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
          Length = 427

 Score =  210 bits (536), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|256377255|ref|YP_003100915.1| ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
 gi|255921558|gb|ACU37069.1| Ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
          Length = 358

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 102/136 (75%), Positives = 112/136 (82%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGID INQIKIENPHLW + FQ + RTML EA  LEIAY 
Sbjct: 223 MVGIAEQYQYILRDESIHLNFGIDAINQIKIENPHLWGEAFQAEVRTMLAEACELEIAYG 282

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +GLNA  CEQYM+FI NRRC Q+GLEP+F  TENPFPWMSE +DLKKEKNFF
Sbjct: 283 RDTMPNGLLGLNAELCEQYMRFITNRRCAQLGLEPVFAATENPFPWMSEAVDLKKEKNFF 342

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEY  G  L WD
Sbjct: 343 ETRVTEYASGGTLDWD 358


>gi|114321252|ref|YP_742935.1| ribonucleotide-diphosphate reductase subunit beta [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227646|gb|ABI57445.1| Ribonucleoside-diphosphate reductase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 354

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 92/136 (67%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GIAE YQYI+RDES+HLNFGIDVINQI+ ENP LWT +F+Q+  TML EA  LE+AYA
Sbjct: 219 MTGIAEMYQYILRDESIHLNFGIDVINQIRHENPELWTNDFEQEVLTMLREAVELEVAYA 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA  CE+YM FI NRRC Q+GL+ L+    NPFPWMSEV+DL+KEKNFF
Sbjct: 279 RDTMPRGMLGLNADMCEEYMHFITNRRCAQLGLKELYPGATNPFPWMSEVMDLQKEKNFF 338

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVT+Y+ G  L+WD
Sbjct: 339 ETRVTDYRTGGALQWD 354


>gi|330983931|gb|EGH82034.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 388

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 89/136 (65%), Positives = 112/136 (82%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +VG+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT E ++++  M+ + T LEIAYA
Sbjct: 253 LVGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTDELKREATVMIIQGTQLEIAYA 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFIANRR  QIGL  ++   +NPFPWMSE++DLKKEKNFF
Sbjct: 313 RDTMPRGVLGMNAAMMEEYLQFIANRRLTQIGLPEVYAGAKNPFPWMSEIMDLKKEKNFF 372

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 373 ETRVIEYQTGGALSWD 388


>gi|261855609|ref|YP_003262892.1| ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
 gi|261836078|gb|ACX95845.1| Ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
          Length = 398

 Score =  210 bits (536), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 98/135 (72%), Positives = 110/135 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GIAEQYQYIMRDES+H+NFGIDVINQIKIENPHLWT++F+ +   ML EA  LEIAYA
Sbjct: 264 MTGIAEQYQYIMRDESIHMNFGIDVINQIKIENPHLWTEDFKAEVTRMLKEAAELEIAYA 323

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +GLNA  C +Y+ FIANRRC+QIGL  LF    NPFPWMSEVIDLKKEKNFF
Sbjct: 324 RDTMPHGLLGLNAEMCAEYLHFIANRRCNQIGLAELFPGATNPFPWMSEVIDLKKEKNFF 383

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 384 ETRVTDYQTGGALNW 398


>gi|110833571|ref|YP_692430.1| ribonucleotide-diphosphate reductase subunit beta [Alcanivorax
           borkumensis SK2]
 gi|110646682|emb|CAL16158.1| ribonucleoside reductase, beta subunit [Alcanivorax borkumensis
           SK2]
          Length = 430

 Score =  210 bits (535), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+H+NFGIDVINQIK+ENPHLW  + + K+  M+ E T LEI YA
Sbjct: 295 MTGVAEQFQYILRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGTELEIQYA 354

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFIANRR  Q+GL   FK   NPFPWMSE++DL+KEKNFF
Sbjct: 355 RDTMPRGVLGMNAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFF 414

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L W+
Sbjct: 415 ETRVTEYQVGGALSWE 430


>gi|254496936|ref|ZP_05109775.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
 gi|254353845|gb|EET12541.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
          Length = 369

 Score =  210 bits (535), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 85/136 (62%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+++   ++ +   +E  YA
Sbjct: 229 MVGTSEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPEFKEEIIQLIKDGVAMEYQYA 288

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +G+NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFF
Sbjct: 289 KDTMPHGILGMNAEMFEEYLHFIANRRLNQIGLPEQYPGAENPFPWMSEMMDLKKEKNFF 348

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 349 ETRVIEYQAGGTLSWD 364


>gi|302525965|ref|ZP_07278307.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
 gi|302434860|gb|EFL06676.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
          Length = 357

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 97/136 (71%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA  LE+ YA
Sbjct: 222 MVGIAEQYQYILRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLQEACELEVKYA 281

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GL+A  CEQYM FI +RR  QIGL P++   ENPFPWMSE +DLKKEKNFF
Sbjct: 282 RDTMPRGMLGLSADLCEQYMHFITDRRAQQIGLPPIYGENENPFPWMSEAMDLKKEKNFF 341

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 342 ETRVIEYQSGGALDWD 357


>gi|255019430|ref|ZP_05291537.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254971128|gb|EET28583.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 345

 Score =  209 bits (534), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 85/136 (62%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG AEQYQYI+RDES+H NFGID+INQIK+ENP LWT+ FQQ+   ++ +   LE AYA
Sbjct: 209 MVGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTEGFQQEIVGLIRQGVELECAYA 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  ++Y+++I NRR  QIGL+P ++  +NPFPWMSE++DLKKEKNFF
Sbjct: 269 DDTMPRGILGLNAPMFKEYVRYIGNRRLSQIGLKPQWENVQNPFPWMSEMMDLKKEKNFF 328

Query: 121 ETRVTEYQQGAGLKWD 136
           E+RVT+YQ G  L WD
Sbjct: 329 ESRVTDYQTGGALSWD 344


>gi|152980709|ref|YP_001354668.1| ribonucleotide-diphosphate reductase subunit beta
           [Janthinobacterium sp. Marseille]
 gi|151280786|gb|ABR89196.1| ribonucleoside-diphosphate reductase beta chain [Janthinobacterium
           sp. Marseille]
          Length = 392

 Score =  209 bits (534), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G AEQYQYI+RDES+H NFGID+IN IK+ENPHLWT +F+++ +T+   A  LE  YA
Sbjct: 257 MMGAAEQYQYILRDESMHCNFGIDLINTIKLENPHLWTPQFREEIKTLFLRAVELEYRYA 316

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRR  QIGLEP+F+  ENPFPWMSE+IDLKKE+NFF
Sbjct: 317 EDTMPRGVLGLNAPMFKGYLRFIANRRAQQIGLEPMFEQEENPFPWMSEMIDLKKERNFF 376

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 377 ETRVIEYQTGGALNWE 392


>gi|300309722|ref|YP_003773814.1| transmembrane ribonucleoside reductase small subunit
           [Herbaspirillum seropedicae SmR1]
 gi|300072507|gb|ADJ61906.1| transmembrane ribonucleoside reductase (small chain) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 388

 Score =  209 bits (534), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G AEQYQYI+RDES+H NFGID+IN +K+ENPHLWT EF+++ +++   A  LE  YA
Sbjct: 253 MMGAAEQYQYILRDESMHCNFGIDLINTVKMENPHLWTPEFREEIKSLFLRAVELEYRYA 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y++FIANRR  QIGL+PLF   ENPFPWMSE+IDLKKE+NFF
Sbjct: 313 EDTMPRGVLGLNAPMFKSYLRFIANRRAQQIGLDPLFAQEENPFPWMSEMIDLKKERNFF 372

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 373 ETRVIEYQTGGALSWE 388


>gi|212212091|ref|YP_002303027.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuG_Q212]
 gi|212010501|gb|ACJ17882.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuG_Q212]
          Length = 401

 Score =  209 bits (534), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA
Sbjct: 265 MTGTSEQFQYILRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYA 324

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFF
Sbjct: 325 KDTMPRGILGLNANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFF 384

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  LKWD
Sbjct: 385 ETRVIEYQAGGTLKWD 400


>gi|255318309|ref|ZP_05359544.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262379054|ref|ZP_06072210.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
 gi|255304621|gb|EET83803.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262298511|gb|EEY86424.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
          Length = 427

 Score =  209 bits (534), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 87/135 (64%), Positives = 108/135 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEIIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR +Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNAAMMEEYLKFICNRRLNQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|92119123|ref|YP_578852.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           hamburgensis X14]
 gi|91802017|gb|ABE64392.1| Ribonucleoside-diphosphate reductase [Nitrobacter hamburgensis X14]
          Length = 416

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 99/136 (72%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIKIENPHLW+K FQ++ R ML  A  LE AY 
Sbjct: 281 MVGIAEQYQYILRDESIHLNFGIDVINQIKIENPHLWSKPFQEEVRAMLKNAAELEAAYG 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CEQYM  IANRRC Q+GL P+F   +NPFPWMSE +DLKKEKNFF
Sbjct: 341 RDTMPRGFLGLNAALCEQYMHVIANRRCAQLGLAPVFAEADNPFPWMSEAMDLKKEKNFF 400

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 401 ETRVIEYQNGGALAWD 416


>gi|148359319|ref|YP_001250526.1| ribonucleoside-diphosphate reductase subunit beta [Legionella
           pneumophila str. Corby]
 gi|296107366|ref|YP_003619066.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148281092|gb|ABQ55180.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila str. Corby]
 gi|295649267|gb|ADG25114.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|307610475|emb|CBX00047.1| hypothetical protein LPW_18021 [Legionella pneumophila 130b]
          Length = 367

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA
Sbjct: 230 MVGTSEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYA 289

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +G+NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFF
Sbjct: 290 RDTMPHGILGMNAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFF 349

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 350 ETRVIEYQAGGTLSWD 365


>gi|300784783|ref|YP_003765074.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
 gi|299794297|gb|ADJ44672.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
          Length = 357

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 98/136 (72%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGID INQIKIENPHLWT+EFQ + R ML EA  LE+ YA
Sbjct: 222 MVGIAEQYQYILRDESIHLNFGIDCINQIKIENPHLWTEEFQAEVRGMLKEACELEVKYA 281

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GL+A  CEQYM F+ +RR  QIGL P+F  TENPFPWMSE +DLKKEKNFF
Sbjct: 282 RDTMPRGMLGLSAQLCEQYMHFVTDRRAQQIGLAPIFGETENPFPWMSEAMDLKKEKNFF 341

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 342 ETRVIEYQSGGALDWD 357


>gi|315122301|ref|YP_004062790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495703|gb|ADR52302.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 372

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 105/136 (77%), Positives = 120/136 (88%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYIMRDES+HLNFGID+INQIKIENPHLWT++FQQ+ R ML EA LLE+AY 
Sbjct: 237 MVGIAEQYQYIMRDESVHLNFGIDMINQIKIENPHLWTEDFQQEVRKMLQEAALLEVAYG 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMPK F+G+NA  CE+YM FI NRRC QIGL+P+F+ TENPFPWMSEVIDL+KEKNFF
Sbjct: 297 KDTMPKPFLGINANLCEKYMYFITNRRCTQIGLDPVFEKTENPFPWMSEVIDLQKEKNFF 356

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ+G  L WD
Sbjct: 357 ETRVTEYQKGTSLDWD 372


>gi|29654845|ref|NP_820537.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 493]
 gi|154705923|ref|YP_001423853.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii Dugway 5J108-111]
 gi|161831080|ref|YP_001597389.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 331]
 gi|29542113|gb|AAO91051.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           RSA 493]
 gi|154355209|gb|ABS76671.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           Dugway 5J108-111]
 gi|161762947|gb|ABX78589.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 331]
          Length = 401

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA
Sbjct: 265 MTGTSEQFQYILRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYA 324

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFF
Sbjct: 325 KDTMPRGILGLNANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFF 384

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  LKWD
Sbjct: 385 ETRVIEYQAGGTLKWD 400


>gi|153208286|ref|ZP_01946665.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165919229|ref|ZP_02219315.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212219268|ref|YP_002306055.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuK_Q154]
 gi|120576070|gb|EAX32694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165917090|gb|EDR35694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212013530|gb|ACJ20910.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuK_Q154]
          Length = 401

 Score =  209 bits (532), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLW K FQ++   M+ E   LE  YA
Sbjct: 265 MTGTSEQFQYILRDESMHVNFGIDVINQIKIENPHLWNKNFQKEVIEMILEGVELEYQYA 324

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y+Q+IANRRC QIGL   F   +N FPWMSE++DLKKEKNFF
Sbjct: 325 KDTMPRGILGLNANMFKDYLQYIANRRCAQIGLPEQFPGAKNTFPWMSEMMDLKKEKNFF 384

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  LKWD
Sbjct: 385 ETRVIEYQAGGTLKWD 400


>gi|52842002|ref|YP_095801.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52629113|gb|AAU27854.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 381

 Score =  209 bits (532), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+ +   ++ E   LE  YA
Sbjct: 244 MVGTSEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPEFKNEMIQLIREGVELEYQYA 303

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +G+NA   E+Y+ FIANRR +QIGL   +   ENPFPWMSE++DLKKEKNFF
Sbjct: 304 RDTMPHGILGMNAEMFEEYLHFIANRRLNQIGLPDQYPGAENPFPWMSEMLDLKKEKNFF 363

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 364 ETRVIEYQAGGTLSWD 379


>gi|299134880|ref|ZP_07028072.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
 gi|298590690|gb|EFI50893.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
          Length = 373

 Score =  209 bits (532), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 100/136 (73%), Positives = 112/136 (82%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIK+EN HLWTK FQ+  R M+ +A  LE AY 
Sbjct: 238 MVGIAEQYQYILRDESIHLNFGIDVINQIKLENQHLWTKAFQEDVRGMIRDAAELEAAYG 297

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CEQYM FIANRRC QIGL P+F  TENPFPWMSE +DLKKEKNFF
Sbjct: 298 RDTMPRGFLGLNAALCEQYMHFIANRRCAQIGLTPVFPETENPFPWMSEAMDLKKEKNFF 357

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 358 ETRVIEYQNGGALSWE 373


>gi|262280153|ref|ZP_06057938.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
 gi|262260504|gb|EEY79237.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
          Length = 427

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 86/135 (63%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLW+ EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|226953559|ref|ZP_03824023.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|294649451|ref|ZP_06726876.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226835696|gb|EEH68079.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|292824656|gb|EFF83434.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 427

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 86/135 (63%), Positives = 106/135 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT  FQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTATFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLAQLGLPEQFAGVTNPFQWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|145588393|ref|YP_001154990.1| ribonucleotide-diphosphate reductase subunit beta [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046799|gb|ABP33426.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 394

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 84/136 (61%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT  F+ + +++  +A  LE  YA
Sbjct: 259 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWTSAFKDEIKSIFEKAVELEYRYA 318

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  + Y+++I NRRC QIGL+ +F   ENPFPWMSE+IDLKKE+NFF
Sbjct: 319 EDTMPRGVLGLNAPMFKGYLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFF 378

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 379 ETRVIEYQTGGALSWE 394


>gi|30250346|ref|NP_842416.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           europaea ATCC 19718]
 gi|30181141|emb|CAD86334.1| Ribonucleotide reductase [Nitrosomonas europaea ATCC 19718]
          Length = 382

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 91/136 (66%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGIDVINQIK+ENPHLWT+EF+++   ++ +A  LE  YA
Sbjct: 247 MTGAAEQYQYILRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYA 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  ++Y++FI NRR HQIGL+PLF    NPFPWMSE+IDLKKEKNFF
Sbjct: 307 EDTMPRGVLGLNAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMIDLKKEKNFF 366

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 367 ETRVIEYQTGGVLSWD 382


>gi|299771426|ref|YP_003733452.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
 gi|298701514|gb|ADI92079.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
          Length = 427

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 86/135 (63%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLW+ EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWSAEFQQEVVQMIVEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|302877617|ref|YP_003846181.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
 gi|302580406|gb|ADL54417.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
          Length = 365

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+HLNFG+D+INQIK+ENPHLWT  F+++ R ++ +   LE AYA
Sbjct: 230 MTGAAEQYQYILRDESMHLNFGVDLINQIKMENPHLWTAAFREEIRGLMQKGVELEYAYA 289

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   ++Y++FIANRRC QIG++ L++   NPFPWMSE+IDLKKEKNFF
Sbjct: 290 EDTMPRGILGLNATMFKEYLRFIANRRCQQIGVDILYQGATNPFPWMSEMIDLKKEKNFF 349

Query: 121 ETRVTEYQQGAGLKWD 136
           E+RVTEYQ G  L WD
Sbjct: 350 ESRVTEYQTGGTLSWD 365


>gi|75677068|ref|YP_319489.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           winogradskyi Nb-255]
 gi|74421938|gb|ABA06137.1| ribonucleotide reductase [Nitrobacter winogradskyi Nb-255]
          Length = 391

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 97/136 (71%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGID+INQIKIENPHLW+K FQ++ R ML  A  LE AY 
Sbjct: 256 MVGIAEQYQYILRDESIHLNFGIDIINQIKIENPHLWSKPFQEEVRAMLKNAADLEAAYG 315

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CE YM  IANRRC Q+GL P+F   +NPFPWMSE +DLKKEKNFF
Sbjct: 316 RDTMPRGFLGLNATLCETYMHVIANRRCAQLGLAPVFPDADNPFPWMSEAMDLKKEKNFF 375

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 376 ETRVIEYQNGGALAWD 391


>gi|294840478|ref|ZP_06785161.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6014059]
          Length = 427

 Score =  208 bits (530), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 86/135 (63%), Positives = 106/135 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMS ++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSGMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|262369327|ref|ZP_06062655.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
 gi|262315395|gb|EEY96434.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
          Length = 427

 Score =  208 bits (530), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 85/135 (62%), Positives = 106/135 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENP LWT EFQ++   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPSLWTAEFQEEIIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNAAMMEEYLKFICNRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|325121074|gb|ADY80597.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 370

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 236 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVVQMIVEGTMLEIEYA 295

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 296 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 355

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 356 ETRVTDYQTGGALSW 370


>gi|119713586|gb|ABL97637.1| ribonucleotide-diphosphate reductase beta subunit [uncultured
           marine bacterium EB0_39H12]
          Length = 412

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 87/136 (63%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGID+INQIK+ENPHLW ++ + ++  M+ E T LEI YA
Sbjct: 277 MTGTAEQFQYILRDESMHLNFGIDMINQIKLENPHLWDEQMRHEAAQMILEGTELEIQYA 336

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFIANRR  QIGLE  F+   NPFPWMSE++DL+KEKNFF
Sbjct: 337 RDTMPRGILGMNAGMMEEYLQFIANRRLVQIGLEEEFEGASNPFPWMSEIMDLRKEKNFF 396

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 397 ETRVIEYQTGGALTWD 412


>gi|257055668|ref|YP_003133500.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
 gi|256585540|gb|ACU96673.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
          Length = 349

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 98/136 (72%), Positives = 114/136 (83%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFG+D INQIK ENPHLWT EFQQ+ R ML EA  LE+AYA
Sbjct: 214 MVGIAEQYQYILRDESIHLNFGVDCINQIKAENPHLWTPEFQQQVRDMLVEACELEVAYA 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           H+TMP+  +GL+A  CEQYM FI +RR  Q+GL+P+F   ENPFPWMSEVIDL+KEKNFF
Sbjct: 274 HDTMPRPMLGLSAELCEQYMHFITDRRAAQLGLDPVFGERENPFPWMSEVIDLRKEKNFF 333

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVT+Y+ GA L WD
Sbjct: 334 ETRVTDYRSGAALAWD 349


>gi|289677030|ref|ZP_06497920.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae FF5]
          Length = 243

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 108 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 167

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 168 RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 227

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 228 ETRVIEYQTGGALSWD 243


>gi|270156779|ref|ZP_06185436.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|289164772|ref|YP_003454910.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           longbeachae NSW150]
 gi|269988804|gb|EEZ95058.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|288857945|emb|CBJ11805.1| putative ribonucleoside-diphosphate reductase, beta subunit
           [Legionella longbeachae NSW150]
          Length = 366

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 85/136 (62%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +EQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT EF+++   ++ +   LE  YA
Sbjct: 229 MVGTSEQFQYILRDESMHMNFGIDVINQIKIENPHLWTSEFKEEIIQLIRQGVDLEYQYA 288

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+ FIANRR  QIGL   +    NPFPWMSE++DLKKEKNFF
Sbjct: 289 KDTMPQGILGMNAEMFEEYLHFIANRRLTQIGLAEQYPGAVNPFPWMSEMMDLKKEKNFF 348

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 349 ETRVIEYQAGGTLSWD 364


>gi|262376783|ref|ZP_06070011.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
 gi|262308493|gb|EEY89628.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
          Length = 427

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 86/135 (63%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENP LWT EFQ++   M+ E T+LEI YA
Sbjct: 293 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPGLWTTEFQEEIIQMILEGTMLEIEYA 352

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FIANRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 353 RDTMPRGVLGMNAGMMEEYLKFIANRRLAQLGLPEQFAGVNNPFQWMSEMMDLRKEKNFF 412

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 413 ETRVTDYQTGGALSW 427


>gi|284032753|ref|YP_003382684.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
 gi|283812046|gb|ADB33885.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
          Length = 354

 Score =  207 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 97/136 (71%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDESLHLNFGID INQIK+ENPHLWT  FQ + R ML EA  LE+AY 
Sbjct: 219 MVGIAEQYQYILRDESLHLNFGIDCINQIKLENPHLWTPAFQAEVRRMLTEACELEVAYG 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             T+P G +GL A  CEQYM FI +RR  Q+GL PLF  T NPF WMSEV+DLKKEKNFF
Sbjct: 279 RATLPNGMLGLTAELCEQYMHFITDRRAEQLGLAPLFGETRNPFGWMSEVMDLKKEKNFF 338

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G GL WD
Sbjct: 339 ETRVIEYQSGGGLSWD 354


>gi|121608466|ref|YP_996273.1| ribonucleotide-diphosphate reductase subunit beta
           [Verminephrobacter eiseniae EF01-2]
 gi|121553106|gb|ABM57255.1| Ribonucleoside-diphosphate reductase [Verminephrobacter eiseniae
           EF01-2]
          Length = 399

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 84/136 (61%), Positives = 101/136 (74%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LWT  F+ +   +  +A  LE  YA
Sbjct: 264 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPLLWTTAFKAEIEALFLQAVELEYRYA 323

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +G+NA   + Y+++IANRR  QIGLE LF    NPFPWMSE+IDLKKE+NFF
Sbjct: 324 EDTMPHGVLGMNASMFKGYLRYIANRRATQIGLETLFPQETNPFPWMSEMIDLKKERNFF 383

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 384 ETRVIEYQSGGALCWD 399


>gi|114332419|ref|YP_748641.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           eutropha C91]
 gi|114309433|gb|ABI60676.1| Ribonucleoside-diphosphate reductase [Nitrosomonas eutropha C91]
          Length = 377

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 90/136 (66%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGIDVINQIK+ENPHLWT+EF+++   ++ +A  LE  YA
Sbjct: 242 MTGAAEQYQYILRDESMHCNFGIDVINQIKLENPHLWTREFREEISALMRKAVELEYRYA 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  ++Y++FI NRR HQIGL+PLF    NPFPWMSE++DLKKEKNFF
Sbjct: 302 EDTMPRGVLGLNAPMFKEYLRFIINRRSHQIGLDPLFPEAGNPFPWMSEMVDLKKEKNFF 361

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 362 ETRVIEYQTGGVLSWD 377


>gi|198284354|ref|YP_002220675.1| ribonucleotide-diphosphate reductase subunit beta
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198248875|gb|ACH84468.1| Ribonucleoside-diphosphate reductase [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 374

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 83/136 (61%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG AEQYQYI+RDES+H NFGID+ NQIK+ENP LWT+ FQQ+   ++     LE AYA
Sbjct: 239 MVGAAEQYQYILRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYA 298

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP   +Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFF
Sbjct: 299 DDTMPRGVLGLNAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFF 358

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L W+
Sbjct: 359 ETRVTEYQTGGALSWE 374


>gi|218665361|ref|YP_002427016.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218517574|gb|ACK78160.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 380

 Score =  206 bits (526), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 83/136 (61%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG AEQYQYI+RDES+H NFGID+ NQIK+ENP LWT+ FQQ+   ++     LE AYA
Sbjct: 245 MVGAAEQYQYILRDESMHCNFGIDMANQIKVENPQLWTEAFQQEIIDLIRRGVELECAYA 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP   +Y+++I NRR  Q+GL   +   +NPFPWMSE++DLKKEKNFF
Sbjct: 305 DDTMPRGVLGLNAPVFREYVKYIGNRRLVQLGLPQQYPGVQNPFPWMSEMMDLKKEKNFF 364

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L W+
Sbjct: 365 ETRVTEYQTGGALSWE 380


>gi|254429337|ref|ZP_05043044.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
 gi|196195506|gb|EDX90465.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
          Length = 355

 Score =  206 bits (525), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+H+NFGIDVINQIK+ENPHLW  + + K+  M+ E   LEI YA
Sbjct: 220 MTGVAEQFQYILRDESMHVNFGIDVINQIKLENPHLWDAQMRDKATQMILEGAELEIQYA 279

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y+QFIANRR  Q+GL   FK   NPFPWMSE++DL+KEKNFF
Sbjct: 280 RDTMPRGVLGMNAAMMEEYLQFIANRRLAQLGLPEQFKGVNNPFPWMSEIMDLRKEKNFF 339

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L W+
Sbjct: 340 ETRVTEYQVGGALSWE 355


>gi|126640804|ref|YP_001083788.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ATCC 17978]
 gi|322506921|gb|ADX02375.1| nrdB [Acinetobacter baumannii 1656-2]
 gi|323516789|gb|ADX91170.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 361

 Score =  206 bits (525), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 87/135 (64%), Positives = 107/135 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGID+INQIKIENPHLWT EFQQ+   M+ E T+LEI YA
Sbjct: 227 MNGVAEQFQYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYA 286

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E+Y++FI NRR  Q+GL   F    NPF WMSE++DL+KEKNFF
Sbjct: 287 RDTMPRGVLGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFF 346

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 347 ETRVTDYQTGGALSW 361


>gi|294339031|emb|CAZ87378.1| putative Ribonucleoside-diphosphate reductase (ribonucleoside
           diphosphate reductase, beta subunit) [Thiomonas sp. 3As]
          Length = 410

 Score =  206 bits (525), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID++NQIK+ENPHLWT EF+++   + H+A  LE  YA
Sbjct: 275 MTGAAEQYQYILRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYA 334

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FIANRR  QIGL+ +F   ENPFPWMSE+IDLKKE+NFF
Sbjct: 335 EDTMPRGVLGLNASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFF 394

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 395 ETRVIEYQSGGALSWE 410


>gi|296135014|ref|YP_003642256.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
 gi|295795136|gb|ADG29926.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
          Length = 402

 Score =  206 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 107/136 (78%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID++NQIK+ENPHLWT EF+++   + H+A  LE  YA
Sbjct: 267 MTGAAEQYQYILRDESMHTNFGIDLVNQIKLENPHLWTPEFKRELTGLFHQAVELEYRYA 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNA   + Y++FIANRR  QIGL+ +F   ENPFPWMSE+IDLKKE+NFF
Sbjct: 327 EDTMPRGVLGLNASMFKGYLRFIANRRAVQIGLDAIFPNEENPFPWMSEMIDLKKERNFF 386

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 387 ETRVIEYQSGGALSWE 402


>gi|90425007|ref|YP_533377.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris BisB18]
 gi|90107021|gb|ABD89058.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           BisB18]
          Length = 386

 Score =  206 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 100/136 (73%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIKIENP LWT  FQ++ R ML EA  LE AY+
Sbjct: 251 MVGIAEQYQYILRDESIHLNFGIDVINQIKIENPKLWTAGFQEELRGMLQEAAELEAAYS 310

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CEQYM FI NRRC Q+GL P+F   ENPFPWMSE +DLKKEKNFF
Sbjct: 311 RDTMPRGFLGLNAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFF 370

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 371 ETRVIEYQNGGALTWD 386


>gi|85714830|ref|ZP_01045816.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
 gi|85698316|gb|EAQ36187.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
          Length = 389

 Score =  204 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 99/136 (72%), Positives = 110/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+GIAEQYQYI+RDES+HLNFGIDVINQIKIENPHLWTK FQ + R ML  A  LE AY 
Sbjct: 254 MIGIAEQYQYILRDESIHLNFGIDVINQIKIENPHLWTKTFQDEVRAMLKNAAELEAAYG 313

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF+GLNA  CE YM  IANRRC Q+GL P+F  T+NPFPWMSE +DLKKEKNFF
Sbjct: 314 RDTMPRGFLGLNAALCETYMHVIANRRCAQLGLAPVFAETDNPFPWMSEAMDLKKEKNFF 373

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 374 ETRVIEYQNGGALAWD 389


>gi|119478322|ref|ZP_01618353.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
 gi|119448662|gb|EAW29907.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
          Length = 422

 Score =  204 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 84/136 (61%), Positives = 111/136 (81%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIK+ENP LW+++FQQ+   M+ E T LEI YA
Sbjct: 287 MTGVAEQFQYILRDESMHLNFGIDVINQIKLENPQLWSEKFQQEIIQMILEGTQLEIEYA 346

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            ++MP+G +G+NA   E+Y+QFI+NRR +Q+GL   ++  +NPFPWMSE++DL+KEKNFF
Sbjct: 347 RDSMPRGVLGMNAAMMEEYLQFISNRRLNQLGLPEQYQGAQNPFPWMSEIMDLRKEKNFF 406

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 407 ETRVIEYQTGGALNWE 422


>gi|115525181|ref|YP_782092.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53]
 gi|115519128|gb|ABJ07112.1| ribonucleotide reductase [Rhodopseudomonas palustris BisA53]
          Length = 223

 Score =  204 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 99/136 (72%), Positives = 109/136 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGID+INQIKIENP LWT  FQ++ R ML EA  LE AY 
Sbjct: 88  MVGIAEQYQYILRDESIHLNFGIDIINQIKIENPELWTAGFQEELRGMLREAAELEAAYC 147

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+GF GLNA  CEQYM FI NRRC Q+GL P+F   ENPFPWMSE +DLKKEKNFF
Sbjct: 148 RDTMPRGFFGLNAALCEQYMHFITNRRCAQLGLAPIFAEVENPFPWMSETMDLKKEKNFF 207

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 208 ETRVIEYQNGGALTWD 223


>gi|312962626|ref|ZP_07777115.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
 gi|311283001|gb|EFQ61593.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
          Length = 136

 Score =  203 bits (518), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 88/136 (64%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 1   MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYA 60

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +G+NA   E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFF
Sbjct: 61  RDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF 120

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 121 ETRVIEYQTGGALSWD 136


>gi|192291019|ref|YP_001991624.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris TIE-1]
 gi|192284768|gb|ACF01149.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           TIE-1]
          Length = 373

 Score =  203 bits (517), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 94/136 (69%), Positives = 106/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GIAEQYQYI+RDES+HLNFGIDVINQIK+EN  +WT  FQ   R M+H+A  LE AY 
Sbjct: 238 MTGIAEQYQYILRDESIHLNFGIDVINQIKLENAAVWTASFQDDIRGMIHDAAELEAAYG 297

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +GLNA  CE YM FIANRRC Q+GL P+F  T+NPFPWMSE +DLKKEKNFF
Sbjct: 298 RDTMPHGLLGLNAALCESYMHFIANRRCVQLGLRPVFAETDNPFPWMSETMDLKKEKNFF 357

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L WD
Sbjct: 358 ETRVIEYQNGGALDWD 373


>gi|300022335|ref|YP_003754946.1| ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524156|gb|ADJ22625.1| Ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 374

 Score =  202 bits (515), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 96/136 (70%), Positives = 108/136 (79%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGIAEQYQYI+RDES+HLNFGIDVINQIK EN HLW+K FQ + R ML +A  LE AY 
Sbjct: 239 MVGIAEQYQYILRDESIHLNFGIDVINQIKAENAHLWSKAFQDEVRGMLRDAAQLEAAYG 298

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP G +GLN    EQYM+FIANRRC Q+GL P+FK  ENPFPWMSE +DLKKEKNFF
Sbjct: 299 RDTMPTGLLGLNPGLTEQYMEFIANRRCAQLGLTPVFKDRENPFPWMSEAMDLKKEKNFF 358

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 359 ETRVIEYQNGGALSWE 374


>gi|171463021|ref|YP_001797134.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192559|gb|ACB43520.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 394

 Score =  200 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 82/136 (60%), Positives = 104/136 (76%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDES+H NFGID+INQIK+ENP LW   F+ + +++  +A  LE  YA
Sbjct: 259 MTGAAEQYQYILRDESMHCNFGIDLINQIKLENPQLWISAFKDEIKSIFEKAVELEYRYA 318

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +TMP+G +GLNAP  +  +++I NRRC QIGL+ +F   ENPFPWMSE+IDLKKE+NFF
Sbjct: 319 EDTMPRGVLGLNAPMFKGCLRYICNRRCLQIGLDAMFPNEENPFPWMSEMIDLKKERNFF 378

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ G  L W+
Sbjct: 379 ETRVIEYQTGGALSWE 394


>gi|88812072|ref|ZP_01127324.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
 gi|88790576|gb|EAR21691.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
          Length = 370

 Score =  199 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 86/136 (63%), Positives = 105/136 (77%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+HLNFGIDVINQIK ENPHLWT EFQ  ++  + E+  LE+ YA
Sbjct: 235 MTGTAEQFQYILRDESIHLNFGIDVINQIKQENPHLWTAEFQATAQRTILESMALEVDYA 294

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +T+P+G +GLNA   E+Y++FI NRR  QIGL   F   ENP PWMSE++DLKKEKNFF
Sbjct: 295 RDTLPRGVLGLNAAMIEEYLRFITNRRLAQIGLTEAFPGAENPLPWMSELVDLKKEKNFF 354

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEY+ G  L W+
Sbjct: 355 ETRVTEYRTGGALSWE 370


>gi|268316001|ref|YP_003289720.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
 gi|262333535|gb|ACY47332.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
          Length = 347

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 83/136 (61%), Positives = 108/136 (79%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN IK ENP LWT EFQ++ + ++ EA  LE+AYA
Sbjct: 212 MTGIGEQFQYILRDETIHLNFGIDLINGIKAENPELWTPEFQREVQQLIEEAVELEVAYA 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           ++ +P+G +GL AP   +Y+Q+IA+RR  +IGL+  +  ++NPFPWMSE IDL KEKNFF
Sbjct: 272 YDCLPRGVLGLTAPMFREYVQYIADRRLERIGLKARY-GSKNPFPWMSETIDLLKEKNFF 330

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQQ A L WD
Sbjct: 331 ETRVTEYQQAAALSWD 346


>gi|166154172|ref|YP_001654290.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 434/Bu]
 gi|166155047|ref|YP_001653302.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
 gi|301335416|ref|ZP_07223660.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2tet1]
 gi|165930160|emb|CAP03644.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis 434/Bu]
 gi|165931035|emb|CAP06598.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
          Length = 346

 Score =  198 bits (504), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/135 (60%), Positives = 102/135 (75%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA
Sbjct: 213 MIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFF
Sbjct: 273 QDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ  A L W
Sbjct: 332 ETRVTEYQHAASLTW 346


>gi|282890382|ref|ZP_06298910.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499764|gb|EFB42055.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 350

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 82/135 (60%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDES+HLNFGID+IN IK ENP +WT EF+ +   M+ EA  LEI YA
Sbjct: 217 MTGIGEQFQYILRDESIHLNFGIDLINTIKEENPEVWTPEFKDQIIDMVKEAVELEIQYA 276

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P G +GLNA     Y+ +IA+RR  +IGL+P +  T NPFPWMSEV+DL KEKNFF
Sbjct: 277 ADCLPNGILGLNAALFRDYVGYIADRRLERIGLKPQYN-TANPFPWMSEVMDLDKEKNFF 335

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ GA L W
Sbjct: 336 ETRVTQYQSGAALVW 350


>gi|15834835|ref|NP_296594.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270285001|ref|ZP_06194395.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270289024|ref|ZP_06195326.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Weiss]
 gi|301336399|ref|ZP_07224601.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum MopnTet14]
 gi|14195147|sp|Q9PL92|RIR2_CHLMU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|7190253|gb|AAF39087.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydia
           muridarum Nigg]
          Length = 346

 Score =  196 bits (500), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 82/135 (60%), Positives = 102/135 (75%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGI EQYQYI+RDE++HLNFG+D+IN IK ENP +WT E QQ+   M+  A  LEI YA
Sbjct: 213 MVGIGEQYQYILRDETIHLNFGVDLINGIKEENPEIWTTELQQEIIEMIQRAVDLEIDYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFF
Sbjct: 273 RDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ  A L W
Sbjct: 332 ETRVTEYQHAASLTW 346


>gi|33242353|ref|NP_877294.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae TW-183]
 gi|33236864|gb|AAP98951.1| ribonucleoside reductase small chain [Chlamydophila pneumoniae
           TW-183]
          Length = 365

 Score =  196 bits (499), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 75/135 (55%), Positives = 100/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E Q++   ++ +A  LEI YA
Sbjct: 232 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYA 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL +     Y++ IA+RR  +IGL+P++ ++ NPFPWMSE +DL KEKNFF
Sbjct: 292 KDCLPRGILGLRSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFF 350

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ    L W
Sbjct: 351 ETRVTEYQTAGNLSW 365


>gi|112489977|pdb|2ANI|A Chain A, Crystal Structure Of The F127y Mutant Of Ribonucleotide
           Reductase R2 From Chlamydia Trachomatis
          Length = 346

 Score =  196 bits (499), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 80/135 (59%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA
Sbjct: 213 MIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFF
Sbjct: 273 QDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ  A L W
Sbjct: 332 ETRVIEYQHAASLTW 346


>gi|15618893|ref|NP_225179.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae CWL029]
 gi|15836516|ref|NP_301040.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae J138]
 gi|16752043|ref|NP_445409.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae AR39]
 gi|14195165|sp|Q9Z6S4|RIR2_CHLPN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4377313|gb|AAD19122.1| Ribonucleoside Reductase, Small Chain [Chlamydophila pneumoniae
           CWL029]
 gi|7189783|gb|AAF38660.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae AR39]
 gi|8979358|dbj|BAA99192.1| ribonucleoside reductase, small chain [Chlamydophila pneumoniae
           J138]
 gi|269302786|gb|ACZ32886.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae LPCoLN]
          Length = 346

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 75/135 (55%), Positives = 100/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E Q++   ++ +A  LEI YA
Sbjct: 213 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTTELQEEIVALIEKAVELEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL +     Y++ IA+RR  +IGL+P++ ++ NPFPWMSE +DL KEKNFF
Sbjct: 273 KDCLPRGILGLRSSMFIDYVRHIADRRLERIGLKPIY-HSRNPFPWMSETMDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ    L W
Sbjct: 332 ETRVTEYQTAGNLSW 346


>gi|15605563|ref|NP_220349.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D/UW-3/CX]
 gi|255311668|ref|ZP_05354238.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276]
 gi|255317969|ref|ZP_05359215.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276s]
 gi|14195107|sp|O84835|RIR2_CHLTR RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|51247460|pdb|1SYY|A Chain A, Crystal Structure Of The R2 Subunit Of Ribonucleotide
           Reductase From Chlamydia Trachomatis
 gi|3329298|gb|AAC68425.1| Ribonucleoside Reductase, Small Chain [Chlamydia trachomatis
           D/UW-3/CX]
 gi|296436383|gb|ADH18557.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9768]
 gi|296437314|gb|ADH19484.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11222]
 gi|296438242|gb|ADH20403.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11074]
 gi|297140743|gb|ADH97501.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9301]
 gi|297748957|gb|ADI51503.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-EC]
 gi|297749837|gb|ADI52515.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-LC]
          Length = 346

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 80/135 (59%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA
Sbjct: 213 MIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFF
Sbjct: 273 QDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ  A L W
Sbjct: 332 ETRVIEYQHAASLTW 346


>gi|329943118|ref|ZP_08291892.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|325507260|gb|ADZ18898.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC]
 gi|328814665|gb|EGF84655.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|328914953|gb|AEB55786.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           psittaci 6BC]
          Length = 346

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 77/135 (57%), Positives = 100/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA
Sbjct: 213 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFF
Sbjct: 273 RDCLPRGILGLKASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ  A L W
Sbjct: 332 ETRVIEYQTAANLSW 346


>gi|62185356|ref|YP_220141.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           abortus S26/3]
 gi|62148423|emb|CAH64191.1| putative ibonucleoside reductase small subunit [Chlamydophila
           abortus S26/3]
          Length = 349

 Score =  195 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 77/135 (57%), Positives = 100/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA
Sbjct: 216 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYA 275

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFF
Sbjct: 276 RDCLPRGILGLKASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFF 334

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ  A L W
Sbjct: 335 ETRVIEYQTAANLSW 349


>gi|29840533|ref|NP_829639.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           caviae GPIC]
 gi|29834882|gb|AAP05517.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           caviae GPIC]
          Length = 346

 Score =  195 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 76/135 (56%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +W++E Q +   ++ +A  LEI YA
Sbjct: 213 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWSQELQDEIIALIQKAVDLEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL +     Y++ IA+RR  +IGL+P++ Y++NPFPWMSE IDL KEKNFF
Sbjct: 273 KDCLPRGILGLKSSMFIDYVRHIADRRLERIGLKPIY-YSKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ    L W
Sbjct: 332 ETRVTEYQTSGNLSW 346


>gi|313848275|emb|CBY17276.1| putative ibonucleoside reductase small subunit [Chlamydophila
           psittaci RD1]
          Length = 349

 Score =  195 bits (497), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 77/135 (57%), Positives = 100/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E Q +   ++ +A  LEI YA
Sbjct: 216 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTPELQSEIIALIEKAVDLEIEYA 275

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y++ IA+RR  +IGL+P++ +++NPFPWMSE IDL KEKNFF
Sbjct: 276 RDCLPRGILGLKASMFIDYVRHIADRRLERIGLKPIY-HSKNPFPWMSETIDLNKEKNFF 334

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ  A L W
Sbjct: 335 ETRVIEYQTAANLSW 349


>gi|325110864|ref|YP_004271932.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
 gi|324971132|gb|ADY61910.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
          Length = 353

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 79/136 (58%), Positives = 100/136 (73%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + GI EQ+QYI+RDE+ HLNFGID+IN IK ENP +WT++FQQ+   ++ EA  LEI YA
Sbjct: 219 LTGIGEQFQYILRDETTHLNFGIDLINGIKHENPDIWTEKFQQEIIDLVKEAVELEIDYA 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GLN      Y+Q IA+RR  +IGL  L+  + NPFPWMSE +DL KEKNFF
Sbjct: 279 RDCLPRGVLGLNGNLFRDYVQHIADRRLERIGLPTLYN-SSNPFPWMSETMDLAKEKNFF 337

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G  L WD
Sbjct: 338 ETRVTEYQTGGTLSWD 353


>gi|76789573|ref|YP_328659.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis A/HAR-13]
 gi|237803260|ref|YP_002888454.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/Jali20/OT]
 gi|237805181|ref|YP_002889335.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|255349232|ref|ZP_05381239.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70]
 gi|255503769|ref|ZP_05382159.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70s]
 gi|255507450|ref|ZP_05383089.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D(s)2923]
 gi|76168103|gb|AAX51111.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis A/HAR-13]
 gi|231273481|emb|CAX10397.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|231274494|emb|CAX11290.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/Jali20/OT]
 gi|289525874|emb|CBJ15356.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis Sweden2]
 gi|296435459|gb|ADH17637.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/150]
 gi|296439176|gb|ADH21329.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/11023]
          Length = 346

 Score =  195 bits (496), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 80/135 (59%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+GI EQYQYI+RDE++HLNFGID+IN IK ENP +WT E QQ+   ++  A  LEI YA
Sbjct: 213 MIGIGEQYQYILRDETIHLNFGIDLINGIKEENPGIWTPELQQEIVELIKRAVDLEIEYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL A     Y+Q IA+RR  +IGL+P++ +T+NPFPWMSE IDL KEKNFF
Sbjct: 273 QDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIY-HTKNPFPWMSETIDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ  A L W
Sbjct: 332 ETRVIEYQHAASLTW 346


>gi|89898045|ref|YP_515155.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           felis Fe/C-56]
 gi|89331417|dbj|BAE81010.1| ribonucleoside-diphosphate reductase beta chain [Chlamydophila
           felis Fe/C-56]
          Length = 349

 Score =  193 bits (492), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 75/135 (55%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +W+++ Q +   ++ +A  LEI YA
Sbjct: 216 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWSQQLQDEIVDLIQKAVDLEIEYA 275

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GL +     Y++ IA+RR  +IGL+P++  ++NPFPWMSE IDL KEKNFF
Sbjct: 276 RDCLPRGILGLRSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETIDLNKEKNFF 334

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ  A L W
Sbjct: 335 ETRVTEYQTAANLNW 349


>gi|330443801|ref|YP_004376787.1| ribonucleoside-diphosphate reductase subunit beta [Chlamydophila
           pecorum E58]
 gi|328806911|gb|AEB41084.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pecorum E58]
          Length = 346

 Score =  193 bits (492), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 77/135 (57%), Positives = 101/135 (74%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQYQYI+RDE++HLNFGID+IN IK ENP +W+KE Q++   ++  A  LEI YA
Sbjct: 213 MTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWSKELQEEIIALIETAVGLEIDYA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +PKG +GL +     Y++ IA+RR  +IGL+P++  ++NPFPWMSE +DL KEKNFF
Sbjct: 273 KDCLPKGILGLKSSMFIDYVRHIADRRLERIGLKPIYN-SKNPFPWMSETMDLNKEKNFF 331

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ  A L W
Sbjct: 332 ETRVTEYQTAASLSW 346


>gi|254780136|ref|YP_003064549.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254781006|ref|YP_003065419.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254039813|gb|ACT56609.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040683|gb|ACT57479.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 125

 Score =  193 bits (491), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 124/125 (99%), Positives = 124/125 (99%)

Query: 12  MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 71
           MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL
Sbjct: 1   MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 60

Query: 72  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 131
           NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA
Sbjct: 61  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 120

Query: 132 GLKWD 136
            LKWD
Sbjct: 121 ELKWD 125


>gi|283779060|ref|YP_003369815.1| ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
 gi|283437513|gb|ADB15955.1| Ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
          Length = 357

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/136 (56%), Positives = 100/136 (73%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN ++ ENP +WT +FQ++   ++ EA  LE+AYA
Sbjct: 223 MTGIGEQFQYILRDETIHLNFGIDLINGVRAENPGIWTADFQERVIKLVREAVELEVAYA 282

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G VGLN      Y+Q IA+RR  +IGL   +  + NPFPWMSE +DL KEKNFF
Sbjct: 283 WDCLPRGIVGLNGELFRDYVQHIADRRLERIGLPTQY-GSANPFPWMSETMDLGKEKNFF 341

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ  A L WD
Sbjct: 342 ETRVTEYQSAASLAWD 357


>gi|189219089|ref|YP_001939730.1| ribonucleotide-diphosphate reductase subunit beta
           [Methylacidiphilum infernorum V4]
 gi|189185947|gb|ACD83132.1| Ribonucleotide reductase, beta subunit [Methylacidiphilum
           infernorum V4]
          Length = 361

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 76/135 (56%), Positives = 103/135 (76%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN I+ ENP +WT  FQ++   M+ E+  LE AYA
Sbjct: 228 MTGIGEQFQYILRDETIHLNFGIDLINGIREENPEIWTAGFQKEIEEMIDESVRLEYAYA 287

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+G +GLN+   + Y+++IA+RR  +IG +  +  ++NPFPWMSEV+DL KEKNFF
Sbjct: 288 RDCLPRGILGLNSALFKDYVEYIADRRLERIGFKAKY-GSKNPFPWMSEVMDLVKEKNFF 346

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ GA L W
Sbjct: 347 ETRVTEYQSGAVLNW 361


>gi|325181522|emb|CCA15972.1| ribonucleosidediphosphate reductase small chain put [Albugo
           laibachii Nc14]
          Length = 1611

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +++  + P             ++ +A ++E  + 
Sbjct: 252 MPGLCFSNELISRDEGLHCDFACLMYSKLVNKLPE-------ASIHAIISDAVVIEQEFV 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R  H +G+  L+ +T NPF WM  +I L+ + NFF
Sbjct: 305 RDSLPVELIGMNSSLMGQYIEFVADRLLHALGVSKLY-HTSNPFDWMD-MISLQGKTNFF 362

Query: 121 ETRVTEYQQGAGL 133
           E RV EY +   +
Sbjct: 363 EKRVGEYAKSGTI 375


>gi|297621807|ref|YP_003709944.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
 gi|297377108|gb|ADI38938.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
          Length = 344

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 77/136 (56%), Positives = 101/136 (74%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN IK ENP +W ++   +   ++ +A  LEIAYA
Sbjct: 210 MPGIGEQFQYILRDETIHLNFGIDLINGIKAENPEIWNEDLTDEINGLVQQAVELEIAYA 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +GLNA    +Y+Q++A+RR  +IGL  ++K + NPFPWMSE +DL KEKNFF
Sbjct: 270 KECLPHGVLGLNAGLFVEYVQYVADRRLERIGLSAIYK-SSNPFPWMSETMDLTKEKNFF 328

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ  A L WD
Sbjct: 329 ETRVTEYQSAAVLSWD 344


>gi|298243909|ref|ZP_06967716.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
 gi|297556963|gb|EFH90827.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
          Length = 361

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 79/136 (58%), Positives = 103/136 (75%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ EQ+QYI+RDE++HLNFGID+IN IK ENP LWT EFQ     ++  A  LEIAYA
Sbjct: 227 MTGVGEQFQYILRDETIHLNFGIDLINGIKAENPELWTTEFQAHIYDLIKRAVELEIAYA 286

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           ++ +P G +GLNA S   Y+Q +A+RR  +IGL P+F ++ +PFPWMSE +DL KEKNFF
Sbjct: 287 YDCLPNGILGLNAESFRSYVQHVADRRLERIGLAPIF-HSSHPFPWMSETMDLSKEKNFF 345

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ  + L+W+
Sbjct: 346 ETRVTEYQAASTLEWE 361


>gi|316971821|gb|EFV55552.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
          Length = 366

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        K  + + R ++ EA  +E  + 
Sbjct: 229 MPGLTFSNELISRDEGLHCDFACLLYSHLKK-------KPTEDRVRQIITEAVSIEQEFL 281

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++++A+R   ++G   ++  +ENPF +M E+I L+ + NFF
Sbjct: 282 TDALPVRLIGMNCVLMSQYIEYVADRLLVELGCSKVYN-SENPFDFM-EMISLEGKTNFF 339

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EYQ+   +  
Sbjct: 340 EKRVGEYQKAGVMAD 354


>gi|149173739|ref|ZP_01852368.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
 gi|148847269|gb|EDL61603.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
          Length = 359

 Score =  190 bits (485), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 79/136 (58%), Positives = 95/136 (69%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN IK ENP LWT EFQQ     +  A  LEI YA
Sbjct: 225 MTGIGEQFQYILRDETIHLNFGIDLINGIKQENPDLWTPEFQQLIIDRMKYAAELEIEYA 284

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P G +GLN     +Y+Q IA+RR  +IGL   +  + NPFPWMSE +DL KEKNFF
Sbjct: 285 KDCLPTGILGLNGELFREYVQHIADRRLERIGLPAQY-GSANPFPWMSETMDLSKEKNFF 343

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ    L WD
Sbjct: 344 ETRVTEYQSSGSLNWD 359


>gi|289177074|ref|NP_001165948.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Homo
           sapiens]
          Length = 423

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 286 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 338

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 339 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 396

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 397 EKRVSEYQRFAVM 409


>gi|1710401|sp|P49730|RIR2_TOBAC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleoside-diphosphate reductase R2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|1044912|emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum]
          Length = 329

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 74/134 (55%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++       TK  +++ + ++ +A  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------TKLTEERVKGIVADAVEIEREFV 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     +Y++F+A+R    +G + L+   +NPF WM E+I L+ + NFF
Sbjct: 241 CDALPCALVGMNGDLMSKYIEFVADRLLDALGYDKLYN-AQNPFDWM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 299 EKRVGEYQKASVMS 312


>gi|269839640|ref|YP_003324332.1| ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791370|gb|ACZ43510.1| Ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 353

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 77/136 (56%), Positives = 98/136 (72%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN IK ENP  WT+E ++    M+ +A   EIAYA
Sbjct: 219 MTGIGEQFQYILRDETVHLNFGIDLINTIKEENPEAWTEELRRDLVGMIRQAVEYEIAYA 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +GLNA    +Y+Q+IA+RR  +I L   ++ + NPFPWMSE +DL KEKNFF
Sbjct: 279 RECLPNGVLGLNADLFREYVQYIADRRLERIELPVQYR-SRNPFPWMSETMDLPKEKNFF 337

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ    L WD
Sbjct: 338 ETRVTEYQNAGTLVWD 353


>gi|28393533|gb|AAO42187.1| putative ribonucleoside-diphosphate reductase small chain
           [Arabidopsis thaliana]
          Length = 243

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++       TK  + + + ++ +A  +E  + 
Sbjct: 99  MPGLTFSNELISRDEGLHCDFACLIYSLLR-------TKFDEDRLKAIVCDAVEIEREFV 151

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +    VG+N     QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFF
Sbjct: 152 CDALSCALVGMNRELMSQYIEFVADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFF 209

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 210 EKRVGEYQKASVMS 223


>gi|15791173|ref|NP_280997.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           sp. NRC-1]
 gi|169236929|ref|YP_001690129.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           salinarum R1]
 gi|10581791|gb|AAG20477.1| ribonucleoside reductase small chain [Halobacterium sp. NRC-1]
 gi|167727995|emb|CAP14783.1| ribonucleoside-diphosphate reductase beta subunit [Halobacterium
           salinarum R1]
          Length = 331

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 65/136 (47%), Positives = 99/136 (72%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG+ EQ++YIMRDESLHLNFG+D+INQI+ E+P +WT +F+ +  +++ +A  LE  YA
Sbjct: 197 MVGVGEQFEYIMRDESLHLNFGVDLINQIRDEHPDVWTADFEAEVNSLMRDAVDLEQLYA 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +  P   +G+++     Y++++A+RR  Q+ ++P++  T+NPFPWM+E +DL  E NFF
Sbjct: 257 RDACPDDLLGMSSEQFADYVEYVADRRFQQLRMDPVY-GTDNPFPWMTEQVDLNTETNFF 315

Query: 121 ETRVTEYQQGAGLKWD 136
           E  V+EYQQG  L WD
Sbjct: 316 ERNVSEYQQGGSLDWD 331


>gi|52077136|dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|52077275|dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|186920364|gb|ACC95435.1| ribonucleotide diphosphate reductase small subunit 1 [Oryza sativa
           Japonica Group]
          Length = 339

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ +           + R ++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDE-------ARVREIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFF
Sbjct: 250 CDALPVALVGMNGDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFF 307

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 308 EKRVGDYQKASVMS 321


>gi|291220709|ref|XP_002730368.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 402

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  QQ+   ++ +A  +E  + 
Sbjct: 265 MPGLTFSNELISRDEGLHCDFACLMFS-------HLTNKPSQQRIIEIIRDAVKIEQEFL 317

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    +QY++F+A+R    +G   ++   ENPF +M E I L+ + NFF
Sbjct: 318 TDALPVSLIGMNKDLMKQYIEFVADRLLLDLGCNKIYN-KENPFDFM-ENISLEGKTNFF 375

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 376 EKRVGEYQKMGVMS 389


>gi|297668213|ref|XP_002812343.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Pongo abelii]
          Length = 449

 Score =  187 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 312 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 364

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 422

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 423 EKRVGEYQRMGVMS 436


>gi|126303832|ref|XP_001381111.1| PREDICTED: similar to hCG23833, [Monodelphis domestica]
          Length = 493

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  ++K + ++  A  +E  + 
Sbjct: 356 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEEKVKEIIINAVRIEQEFL 408

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 409 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKIFR-VENPFDFM-ENISLEGKTNFF 466

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 467 EKRVGEYQRMGVMS 480


>gi|260064013|ref|NP_001159403.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Homo
           sapiens]
          Length = 449

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 312 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 364

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 422

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 423 EKRVGEYQRMGVMS 436


>gi|119621373|gb|EAX00968.1| hCG23833, isoform CRA_b [Homo sapiens]
 gi|119621374|gb|EAX00969.1| hCG23833, isoform CRA_b [Homo sapiens]
          Length = 449

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 312 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 364

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 422

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 423 EKRVGEYQRMGVMS 436


>gi|241166485|ref|XP_002409876.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
 gi|215494664|gb|EEC04305.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
          Length = 376

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  Q + R ++ +A ++E  + 
Sbjct: 239 MPGLTFSNELISRDEGLHTDFACLMFS-------HLVNKPSQARVRQIICDAVVIEQEFL 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    ++Y++F+A+R   ++G E ++  +ENPF +M E I L+ + NFF
Sbjct: 292 TDALPVALIGMNCELMKRYIEFVADRLLVELGCEKVYN-SENPFDFM-EHISLEGKTNFF 349

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 350 EKRVGEYQKAGVM 362


>gi|218197485|gb|EEC79912.1| hypothetical protein OsI_21460 [Oryza sativa Indica Group]
          Length = 345

 Score =  187 bits (476), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ +           + + ++ +A  +E  + 
Sbjct: 203 MPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDE-------SRVQEIVADAVDIEREFV 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFF
Sbjct: 256 CDALPVALVGMNGELMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFF 313

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 314 EKRVGDYQKASVMS 327


>gi|212723480|ref|NP_001131892.1| hypothetical protein LOC100193273 [Zea mays]
 gi|194692834|gb|ACF80501.1| unknown [Zea mays]
 gi|195624040|gb|ACG33850.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score =  187 bits (476), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ +           + RT++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYDVLRSKLDE-------ARVRTIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++  T NPF WM E+I L+ + NFF
Sbjct: 250 CDALPVSLVGMNGDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLQGKTNFF 307

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 308 EKRVGDYQKASVMN 321


>gi|257053403|ref|YP_003131236.1| ribonucleotide-diphosphate reductase subunit beta [Halorhabdus
           utahensis DSM 12940]
 gi|256692166|gb|ACV12503.1| Ribonucleoside-diphosphate reductase [Halorhabdus utahensis DSM
           12940]
          Length = 330

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 71/135 (52%), Positives = 96/135 (71%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGI +Q++YIMRDESLH+ FG+D+I+QI+ ENP +WT EF  +   ++ EA  LE  YA
Sbjct: 197 MVGIGQQFEYIMRDESLHVGFGVDLIDQIRTENPGVWTDEFDSEVIDLIKEAVELEQIYA 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E  P+  +G++      Y+++IA+RR  Q+ L   +  TENPFPWMSE +DL KEKNFF
Sbjct: 257 REACPEEILGMSGSQFADYVEYIADRRLDQLDLPEQY-GTENPFPWMSEQVDLNKEKNFF 315

Query: 121 ETRVTEYQQGAGLKW 135
           ET+VTEYQ G  L+W
Sbjct: 316 ETQVTEYQSGGSLEW 330


>gi|125554800|gb|EAZ00406.1| hypothetical protein OsI_22421 [Oryza sativa Indica Group]
          Length = 244

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ +           + R ++ +A  +E  + 
Sbjct: 102 MPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDE-------ARVREIVADAVDIEREFV 154

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFF
Sbjct: 155 CDALPVALVGMNGDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFF 212

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 213 EKRVGDYQKASVMS 226


>gi|115466138|ref|NP_001056668.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|55296211|dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|113594708|dbj|BAF18582.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|186920368|gb|ACC95437.1| ribonucleotide diphosphate reductase small subunit 2 [Oryza sativa
           Japonica Group]
 gi|215706414|dbj|BAG93270.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222634884|gb|EEE65016.1| hypothetical protein OsJ_19968 [Oryza sativa Japonica Group]
          Length = 345

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ +           + + ++ +A  +E  + 
Sbjct: 203 MPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDE-------SRVQEIVADAVDIEREFV 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFF
Sbjct: 256 CDALPVALVGMNGELMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFF 313

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 314 EKRVGDYQKASVMS 327


>gi|159899093|ref|YP_001545340.1| ribonucleotide-diphosphate reductase subunit beta [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159892132|gb|ABX05212.1| Ribonucleoside-diphosphate reductase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 342

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/136 (55%), Positives = 100/136 (73%), Gaps = 1/136 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + GI EQ QYI+RDE++HLNFG+D+IN IK ENP +WT EFQ +   ++ ++  LE  YA
Sbjct: 208 LTGIGEQIQYILRDETIHLNFGVDLINGIKAENPAIWTNEFQAEIVQLIRQSVELEAQYA 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P+G +GL+A     Y+Q+IA+RR  +IGL   +  ++NPFPWMSE IDL KEKNFF
Sbjct: 268 AECLPRGVMGLHAAMFRDYVQYIADRRLQRIGLAIQY-GSQNPFPWMSETIDLTKEKNFF 326

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ  A L+WD
Sbjct: 327 ETRVTEYQSAASLEWD 342


>gi|219126374|ref|XP_002183434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405190|gb|EEC45134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 296

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + ++++ + P         +   ++ +A  +E  + 
Sbjct: 160 MPGLCFSNELISRDEGLHCDFACLLYSKLQNQLP-------VARIVEIITDAVTIEQEFV 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++F A+R    +G    +K   NPF WM E+I L+ + NFF
Sbjct: 213 QDALPVELIGMNSTLMCRYIEFCADRLLVALGCPKHYKAV-NPFDWM-EMISLQGKTNFF 270

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EY +    + D
Sbjct: 271 EKRVGEYAKSGVGEKD 286


>gi|298713498|emb|CBJ27053.1| Ribonucleoside-diphosphate reductase small chain [Ectocarpus
           siliculosus]
          Length = 504

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +          L  K  ++    ++ EA  +E ++ 
Sbjct: 362 MPGLTFSNEMISRDEGLHCDFACQLF-------ASLENKPSRETVMAIVREAVEVEKSFI 414

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+NA    QY++F+A+R    +G    +  T+NPF WM  +I L+ + NFF
Sbjct: 415 CGALPCSLIGMNAGVMSQYIEFVADRLLGSLGYGKSY-GTQNPFDWMD-LISLQGKTNFF 472

Query: 121 ETRVTEYQQG 130
           E RV EYQ+ 
Sbjct: 473 EKRVGEYQKA 482


>gi|297805560|ref|XP_002870664.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316500|gb|EFH46923.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 333

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 74/134 (55%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++       TK  +++ ++++ +A  +E  + 
Sbjct: 189 MPGLTFSNELISRDEGLHCDFACLIYSLLR-------TKLDEERLKSIVCDAVEIEREFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFF
Sbjct: 242 CDALPCALVGMNRELMSQYIEFVADRLLTALGCGKVYGVS-NPFDWM-ELISLQGKTNFF 299

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 300 EKRVGEYQKASVMS 313


>gi|291412327|ref|XP_002722439.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Oryctolagus
           cuniculus]
          Length = 400

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 263 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVQEIIVNAVRIEQEFL 315

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 316 TEALPVKLIGMNCALMKQYIEFVADRLLLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 373

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 374 EKRVGEYQRMGVMS 387


>gi|189501948|ref|YP_001957665.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497389|gb|ACE05936.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 355

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   +         HL  K  +++ R ++ +A  +E  + 
Sbjct: 214 MPGLSFSNELISRDEGLHCDFACLLYAN------HLQNKLPEERVREIITDAVAIEKEFV 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R   ++G   ++  T NPF +M E+I L+ + NFF
Sbjct: 268 TDALPVKLIGMNADLMSQYIEFVADRLLLELGCSKVYNAT-NPFDFM-EMISLQGKTNFF 325

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   +K
Sbjct: 326 EKRVGEYQKAGVMK 339


>gi|224055741|ref|XP_002298630.1| predicted protein [Populus trichocarpa]
 gi|222845888|gb|EEE83435.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score =  186 bits (473), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ EA  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKEAVDIEREFV 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 241 VDSLPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 299 EKRVGEYQKASVMS 312


>gi|929959|gb|AAA74020.1| ribonuleotide reductase small subunit [Urechis caupo]
          Length = 399

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        K  Q++   ++ +A  +E ++ 
Sbjct: 259 MPGLTFSNELISRDEGLHCDFACLMFSHLK-------NKPSQERVYDIIRDAVRIEQSFL 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++G   ++   ENPF +M   I L+ + NFF
Sbjct: 312 TEALPVNLIGMNCKLMAQYIEFVADRLLLELGCPKIWN-VENPFDFMD-NISLEGKTNFF 369

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 370 EKRVGEYQKMGVMS 383


>gi|156545974|ref|XP_001606963.1| PREDICTED: similar to ENSANGP00000013211 [Nasonia vitripennis]
          Length = 388

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K  +++  +++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFK-------HIVQKPSEERVISIIKDAVTIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G   ++  +ENPF +M E I L+ + NFF
Sbjct: 302 TDALPVEMIGMNCRLMCQYIEFVADRLLGELGCPKVYN-SENPFDFM-EHISLEGKTNFF 359

Query: 121 ETRVTEYQQGAGLKW 135
           E +V EYQ+   ++ 
Sbjct: 360 EKKVGEYQKWGVMQD 374


>gi|159465291|ref|XP_001690856.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
 gi|158279542|gb|EDP05302.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
          Length = 493

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++     I RDE LH +F   + + +K        +  +++   ++ EA  LE  + 
Sbjct: 348 MPGLSFSNVLISRDEGLHCDFACCLYSHLK-------NRLSRERVLQIVDEAVQLEDEFC 400

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+NA    QY++F+A+R    +G E  +  T NPF WM E+I L+ + NFF
Sbjct: 401 TEALSCELLGMNADLMRQYIRFVADRLLVSLGYEKHYN-TRNPFDWM-EMISLQGKANFF 458

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 459 ERRVGEYQRAGVM 471


>gi|313117005|ref|YP_004038129.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
 gi|312294957|gb|ADQ68993.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
          Length = 330

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/135 (51%), Positives = 95/135 (70%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGI +Q++YIMRDESLH+ FG+D+INQI+ ENP  WT EF  + R ++ +A  LE  YA
Sbjct: 197 MVGIGQQFEYIMRDESLHVGFGVDLINQIRAENPDAWTDEFGAEVRDLIEKAVDLEQIYA 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E  P   +G++     +Y++ +A+RR  Q+ L+  +  T+NPFPWMSE +DL KEKNFF
Sbjct: 257 REACPDDVLGMSPDQFAEYVEHVADRRLGQLDLDASY-GTDNPFPWMSEAVDLNKEKNFF 315

Query: 121 ETRVTEYQQGAGLKW 135
           ET+VTEYQ G  L W
Sbjct: 316 ETQVTEYQSGGSLDW 330


>gi|242076364|ref|XP_002448118.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
 gi|241939301|gb|EES12446.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
          Length = 339

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ +           + R ++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDE-------SRVREIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFF
Sbjct: 250 CDALPVALVGMNGALMSQYIEFVADRLLMALGHKKMYNVA-NPFDWM-ELISLQGKTNFF 307

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 308 EKRVGEYQKASVMS 321


>gi|224129040|ref|XP_002328875.1| predicted protein [Populus trichocarpa]
 gi|222839305|gb|EEE77642.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEEQVKGIVKDAVDIEREFV 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 241 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 299 EKRVGEYQKASVMS 312


>gi|242095388|ref|XP_002438184.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
 gi|241916407|gb|EER89551.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
          Length = 339

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   ++ +           + R ++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYELLRSKLDE-------ARVREIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++  T NPF WM E+I L+ + NFF
Sbjct: 250 CDALPVALVGMNGGLMSQYIEFVADRLLMALGCKKMYNAT-NPFDWM-ELISLQGKTNFF 307

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 308 EKRVGDYQKASVMN 321


>gi|307110551|gb|EFN58787.1| hypothetical protein CHLNCDRAFT_34102 [Chlorella variabilis]
          Length = 335

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  +  +++   ++ +A  +E  + 
Sbjct: 195 MPGLTFSNELISRDEGLHTDFACLLYR-------HIHNRLSEERVAEIVTQAVEIEKEFI 247

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFF
Sbjct: 248 CDALPVDLIGMNSRLMGQYIEFVADRLLVALGNPKVYNVS-NPFDWM-ELISLQGKTNFF 305

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   + 
Sbjct: 306 EKRVGDYQKAGVMN 319


>gi|149637725|ref|XP_001508783.1| PREDICTED: similar to Ribonucleotide reductase M2 B (TP53
           inducible) [Ornithorhynchus anatinus]
          Length = 401

 Score =  185 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +         K  + K + ++ +A  +E  + 
Sbjct: 264 MPGLTFSNELISRDEGLHCDFACLMFQYLVK-------KPSEDKVKEIIIDAVEIEQEFL 316

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F +++NPF +M E I L+ + NFF
Sbjct: 317 TEALPVGLIGMNCTLMKQYIEFVADRLLVELGFSKVF-HSDNPFDFM-ENISLEGKTNFF 374

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+ A + 
Sbjct: 375 EKRVSEYQRFAVMS 388


>gi|224000239|ref|XP_002289792.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975000|gb|EED93329.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +++K+       K  Q++ +T+++EA  +E ++ 
Sbjct: 185 MPGLTFSNELISRDEGLHCSFACQLYSKLKL-------KLSQEEIQTIINEAVDVEKSFI 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G + ++  ++NPF WM  +I L+ + NFF
Sbjct: 238 CDALPVSLIGMNSRLMAQYIEFVADRMLTDLGYQAMY-GSKNPFDWMD-MISLEGKTNFF 295

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 296 EKRVGEYQKSGVM 308


>gi|75224904|sp|Q6Y657|RIR2B_ARATH RecName: Full=Putative ribonucleoside-diphosphate reductase small
           chain B; AltName: Full=Ribonucleoside-diphosphate
           reductase R2B subunit; AltName: Full=Ribonucleotide
           reductase small subunit B
 gi|37729626|gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana]
          Length = 333

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++       TK  + + + ++ +A  +E  + 
Sbjct: 189 MPGLTFSNELISRDEGLHCDFACLIYSLLR-------TKLDEDRLKAIVCDAVEIEREFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFF
Sbjct: 242 CDALPCALVGMNRELMSQYIEFVADRLLAALGCAKVYGVS-NPFDWM-ELISLQGKTNFF 299

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 300 EKRVGEYQKASIMS 313


>gi|226528734|ref|NP_001150842.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|195642302|gb|ACG40619.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   ++        K  + + R ++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYELLR-------NKLDEARVREIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G + ++  T NPF WM E+I L  + NFF
Sbjct: 250 CDALPVALVGMNGDLMSQYIEFVADRLLMALGCKKMYNVT-NPFDWM-ELISLMGKTNFF 307

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 308 EKRVGDYQKASVMN 321


>gi|225684487|gb|EEH22771.1| ribonucleoside-diphosphate reductase small chain A
           [Paracoccidioides brasiliensis Pb03]
          Length = 413

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        +   +  + ++ EA  +E  + 
Sbjct: 262 MPGLTFSNELISRDEGLHTDFACLLFSHLRH-------RPSPEAVQKIITEAVAIEQEFL 314

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M   I L  + NFF
Sbjct: 315 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMD-NISLTGKTNFF 372

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 373 EKRVGDYQKAGVM 385


>gi|169860861|ref|XP_001837065.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|116501787|gb|EAU84682.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 414

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +K        +      + ++ EA  +E  + 
Sbjct: 266 MPGLTFSNELISRDEGMHTDFACLLFSHLKR-------RPHPDVVKRIITEAVAIEQEFL 318

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E ++  T NPF +M  +I L+ + NFF
Sbjct: 319 TDALPVKLIGMNAELMCQYIEFVADRLLVSLGNEKVYNST-NPFDFMD-MISLQGKTNFF 376

Query: 121 ETRVTEYQQGAG 132
           E RV++Y +   
Sbjct: 377 EKRVSDYAKAGV 388


>gi|330921941|ref|XP_003299625.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
 gi|311326599|gb|EFQ92269.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
          Length = 410

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +         +  ++  R ++ EA  +E  + 
Sbjct: 255 MPGLTFSNELISRDEGMHTDFACLLFSLL-------NNRPSKESVRAIITEAVEIEQEFL 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G   ++  T NPF +M E I L  + NFF
Sbjct: 308 SDALPCALLGMNATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFF 365

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 366 EKRVGDYQKAGVM 378


>gi|308806626|ref|XP_003080624.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
 gi|116059085|emb|CAL54792.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
          Length = 241

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +         K  ++  R ++ EA  +E  + 
Sbjct: 101 MPGLTFSNELISRDEGLHRDFACLLYQML-------NNKPDEEVVRKIVTEAVEIEKEFV 153

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   VG+NA     Y++++A+     +G+   +  T NPF WM E+I L+ + NFF
Sbjct: 154 CDSLPCALVGMNAGMMSDYIEYVADHLFTSLGMPKEYN-TANPFDWM-ELISLQGKTNFF 211

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 212 EKRVGEYQKAGVMN 225


>gi|237845387|ref|XP_002371991.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|211969655|gb|EEB04851.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|221501644|gb|EEE27410.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii VEG]
          Length = 391

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+ 
Sbjct: 254 MPGLTFSNELISRDEGLHADFACLLYSQLKHKLPD-------KVVQDMVREAVTVERAFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N  S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFF
Sbjct: 307 CEALPVDLIGMNNRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFF 364

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EYQ+   +  
Sbjct: 365 EKRVGEYQKAGVMAD 379


>gi|255536887|ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223549409|gb|EEF50897.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 329

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        K  +++ + ++ +A  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACLIYSLLKK-------KLSEERVKGIVRDAVNIEREFV 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G    +  + NPF WM E+I L+ + NFF
Sbjct: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGCGKEYNVS-NPFDWM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ A + 
Sbjct: 299 EKRVGEYQKAAVMS 312


>gi|221480670|gb|EEE19110.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii GT1]
          Length = 391

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+ 
Sbjct: 254 MPGLTFSNELISRDEGLHADFACLLYSQLKHKLPD-------KVVQDMVREAVTVERAFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N  S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFF
Sbjct: 307 CEALPVDLIGMNNRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFF 364

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EYQ+   +  
Sbjct: 365 EKRVGEYQKAGVMAD 379


>gi|325119319|emb|CBZ54873.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
          Length = 392

 Score =  184 bits (469), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +Q+K + P        +  + M+ EA  +E A+ 
Sbjct: 255 MPGLTFSNELISRDEGLHADFACLLYSQLKNKLPD-------KVVQDMVREAVTVERAFI 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N  S  QY++F+A+R    +G+  +F +  NPF WM E+I L+ + NFF
Sbjct: 308 CEALPVDLIGMNNRSMAQYIEFVADRLLTSLGVPKIF-FATNPFDWM-ELISLQGKTNFF 365

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EYQ+   +  
Sbjct: 366 EKRVGEYQKAGVMAD 380


>gi|297831106|ref|XP_002883435.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
 gi|297329275|gb|EFH59694.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
          Length = 341

 Score =  184 bits (469), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ + P        +K   ++HEA  +E  + 
Sbjct: 200 MPGLTFSNELISRDEGLHCDFACLLYSLLQKQLP-------LEKVYQIVHEAVEIETEFV 252

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFF
Sbjct: 253 CKALPCDLIGMNSNLMSQYIQFVADRLLVTLGCERRYK-AENPFDWM-EFISLQGKTNFF 310

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 311 EKRVGEYQKASVMS 324


>gi|194690416|gb|ACF79292.1| unknown [Zea mays]
 gi|194704028|gb|ACF86098.1| unknown [Zea mays]
 gi|195619132|gb|ACG31396.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|223943167|gb|ACN25667.1| unknown [Zea mays]
          Length = 339

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ +           + R ++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDE-------SRVREIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 250 CDALPVALVGMNGGLMSQYIEFVADRLLMALGHRKMYNVA-NPFDWM-ELISLQGKTNFF 307

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 308 EKRVGEYQKASVMS 321


>gi|212274629|ref|NP_001130908.1| hypothetical protein LOC100192012 [Zea mays]
 gi|195636980|gb|ACG37958.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ +           + R ++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDE-------SRVREIVADAVDIEREFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 250 CDALPVALVGMNGGLMSQYIEFVADRLLMALGHRKMYNVA-NPFDWM-ELISLQGKTNFF 307

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 308 EKRVGEYQKASVMS 321


>gi|225451453|ref|XP_002269951.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147804660|emb|CAN64484.1| hypothetical protein VITISV_012640 [Vitis vinifera]
          Length = 329

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ ++  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLR-------NKLSEERVKAIVADSVDIEREFV 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N+    QY++F+A+R    +G   ++  + NPF WM E+I L+ + NFF
Sbjct: 241 CDALPCALVGMNSALMSQYIEFVADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 299 EKRVGEYQKASVMS 312


>gi|15229476|ref|NP_189000.1| RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate
           reductase [Arabidopsis thaliana]
 gi|27735240|sp|P50651|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A;
           AltName: Full=Ribonucleoside-diphosphate reductase R2A
           subunit; Short=AtRNR2; Short=Protein R2at; AltName:
           Full=Ribonucleotide reductase small subunit A
 gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana]
 gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana]
          Length = 341

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ + P        +K   ++HEA  +E  + 
Sbjct: 200 MPGLTFSNELISRDEGLHCDFACLLYSLLQKQLP-------LEKVYQIVHEAVEIETEFV 252

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFF
Sbjct: 253 CKALPCDLIGMNSNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFF 310

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 311 EKRVGEYQKASVMS 324


>gi|189199548|ref|XP_001936111.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187983210|gb|EDU48698.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 410

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +         +   ++ R ++ EA  +E  + 
Sbjct: 255 MPGLTFSNELISRDEGMHTDFACLLFSLL-------NNRPSNEEVRAIITEAVEIEQEFL 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G   ++  T NPF +M E I L  + NFF
Sbjct: 308 SDALPCALLGMNATLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFF 365

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 366 EKRVGDYQKAGVM 378


>gi|256081213|ref|XP_002576867.1| ribonucleoside-diphosphate reductase small chain [Schistosoma
           mansoni]
 gi|238662153|emb|CAZ33104.1| ribonucleoside-diphosphate reductase small chain, putative
           [Schistosoma mansoni]
          Length = 365

 Score =  184 bits (468), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 75/134 (55%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   +   I  + P       +++  +++ EA L+E  + 
Sbjct: 225 MPGLSFSNELISRDEGLHCDFACLLFKHIIKKPP-------KERVESIIREAVLIEQEFL 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++FIA+R   ++G E ++ +++NPF +M E I ++ + NFF
Sbjct: 278 SEALPVSLIGMNCKLMCQYIEFIADRLLVELGYEKMY-HSDNPFDFM-ENISIEGKTNFF 335

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 336 EKRVGEYQRAGVMS 349


>gi|312889900|ref|ZP_07749444.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
 gi|311297432|gb|EFQ74557.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
          Length = 343

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H  F   + + +         K  ++   T++ +A  +E  + 
Sbjct: 205 MPGLTFSNELISRDEGMHCEFACLLYSML-------SNKLSKEAVTTIIADAVEIEKEFV 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R   ++G + L+ +  NPF +M E+I L+ + NFF
Sbjct: 258 TDALPVNLIGMNAKLMSQYIEFVADRWLQELGYDKLY-HATNPFDFM-EMISLQGKTNFF 315

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV +YQ+   L  D
Sbjct: 316 EKRVGDYQKSGVLNND 331


>gi|198420293|ref|XP_002130242.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Ciona
           intestinalis]
          Length = 393

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  + +   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSEARVVEIVKDAVTIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    +QY++F+A+R   ++G   +FK  ENPF +M E+I L+ + NFF
Sbjct: 309 TDALPVALIGMNNKLMKQYIEFVADRLLVELGCSKVFK-VENPFDFM-ELISLEGKTNFF 366

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 367 EKRVGEYQKAGVM 379


>gi|313675915|ref|YP_004053911.1| ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
 gi|312942613|gb|ADR21803.1| Ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
          Length = 331

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N       HL  K  ++K   ++ +A  +E  + 
Sbjct: 190 MPGLTFSNELISRDEGLHCDFACLLYN------DHLVNKLSKEKVTAIITDAVEIEKEFV 243

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+NA    QY++F+A+R   ++  + ++  + NPF +M E+I L+ + NFF
Sbjct: 244 TDSLPVKLIGMNADLMCQYIEFVADRLLQELRCDKVY-GSSNPFDFM-EMISLQGKTNFF 301

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   +K
Sbjct: 302 EKRVGDYQKAGVMK 315


>gi|149408710|ref|XP_001506085.1| PREDICTED: similar to 5,10-methenyltetrahydrofolate synthetase
           [Ornithorhynchus anatinus]
          Length = 394

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ + ++  A  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVKEIIINAVRIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFF
Sbjct: 310 TEALPVKLIGMNCTLMKQYIEFVADRLLLELGFSKIFK-VENPFDFM-ENISLEGKTNFF 367

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 368 EKRVGEYQRMGVMS 381


>gi|225432510|ref|XP_002279943.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 340

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ + P        QK   ++HEA  +E  + 
Sbjct: 200 MPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPW-------QKVHHIVHEAVEIETQFV 252

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA    QY++F+A+R    +G E  +   ENPF WM E I L+ + NFF
Sbjct: 253 CEALPCALIGMNATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQGKANFF 310

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 311 ERRVGDYQKASIMS 324


>gi|312216546|emb|CBX96496.1| similar to ribonucleoside-diphosphate reductase subunit M2
           [Leptosphaeria maculans]
          Length = 410

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +        T+  ++  + ++ EA  +E  + 
Sbjct: 254 MPGLTFSNELISRDEGMHTDFACLLFSLL-------NTRPSKESVQAIITEAVEIEKEFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G    +  T NPF +M E I L  + NFF
Sbjct: 307 SDALPCALLGMNATLMCQYIEFVADRLLLSLGNTKFYNAT-NPFDFM-ENISLAGKTNFF 364

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 365 EKRVGDYQKAGVM 377


>gi|301774462|ref|XP_002922647.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Ailuropoda melanoleuca]
          Length = 387

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 250 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 303 TEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 360

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+ A +
Sbjct: 361 EKRVAEYQRFAVM 373


>gi|56118690|ref|NP_001007890.1| ribonucleotide reductase M2, gene 2 [Xenopus (Silurana) tropicalis]
 gi|51258920|gb|AAH80161.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK T NPF +M E I L+ + NFF
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFF 359

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 360 EKKVGEYQKMGVMS 373


>gi|156387375|ref|XP_001634179.1| predicted protein [Nematostella vectensis]
 gi|156221259|gb|EDO42116.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  ++  R ++ +A ++E  + 
Sbjct: 247 MPGLTFSNELISRDEGLHCDFACLMYK-------YLVNKPDEETVRGIIKDAVVIEQEFL 299

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++F+A+R    +  + ++   ENPF +M E I L+ + NFF
Sbjct: 300 TSALPVKLIGMNCALMRQYIEFVADRLLVALNCQKVYN-AENPFDFM-ENISLEGKTNFF 357

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EYQ+   +  
Sbjct: 358 EKRVGEYQKSGVMSD 372


>gi|840719|emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana]
          Length = 340

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +I+ +++  P        +K   ++HEA  +E  + 
Sbjct: 199 MPGLTFSNELISRDEGLHCDFACLLISLLQLHVP-------LEKVYQIVHEAVEIETEFV 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY+QF+A+R    +G E  +K  ENPF WM E I L+ + NFF
Sbjct: 252 CKALPCDLIGMNSNLMSQYIQFVADRLLVTLGCERTYK-AENPFDWM-EFISLQGKTNFF 309

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 310 EKRVGEYQKASVMS 323


>gi|327261313|ref|XP_003215475.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 3 [Anolis carolinensis]
          Length = 391

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 254 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 307 TEALPVNLIGMNCTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFF 364

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 365 EKRVGEYQRMGVMS 378


>gi|89268988|emb|CAJ81953.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
 gi|89269815|emb|CAJ81580.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score =  183 bits (466), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVNKPSEERVVQLITDAVQIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK T NPF +M E I L+ + NFF
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFNKVFKAT-NPFDFM-ENISLEGKTNFF 359

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 360 EKKVGEYQKMGVMS 373


>gi|255551489|ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223543878|gb|EEF45404.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 342

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ +          QK + ++HEA  +E  + 
Sbjct: 201 MPGLTFSNELISRDEGLHCDFACLLYSLLQKQLQW-------QKVQQIVHEAVEIETEFV 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +   ENPF WM E I L+ + NFF
Sbjct: 254 CDALPCALIGMNSTLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANFF 311

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 312 ERRVGDYQKASVMS 325


>gi|326917964|ref|XP_003205263.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Meleagris gallopavo]
          Length = 353

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 75/133 (56%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       +L  +  +++ R ++  A  +E  + 
Sbjct: 216 MPGLTFSNELISRDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFL 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F + ENPF +M E I L+ + NFF
Sbjct: 269 TEALPVGLIGMNCTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFF 326

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 327 EKRVSEYQRFAVM 339


>gi|322368525|ref|ZP_08043093.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
 gi|320551809|gb|EFW93455.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
          Length = 330

 Score =  183 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 69/135 (51%), Positives = 95/135 (70%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGI +Q++YI+RDESLH+ FG+D+IN+I+ ENP+ WT  F  +   ++  A  LE  YA
Sbjct: 197 MVGIGQQFEYILRDESLHVGFGVDLINEIRAENPNAWTDAFGDEVTDLITNAVELEKIYA 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           +E  P   +G++A    +Y++ IA+RR  Q+ L+  +  TENPFPWMSE +DL KEKNFF
Sbjct: 257 YEACPDEILGMSAAQFAEYVEHIADRRLAQLDLDEQY-GTENPFPWMSEQVDLNKEKNFF 315

Query: 121 ETRVTEYQQGAGLKW 135
           ET+VTEYQ G  L W
Sbjct: 316 ETQVTEYQSGGSLDW 330


>gi|327261309|ref|XP_003215473.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 1 [Anolis carolinensis]
          Length = 394

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 310 TEALPVNLIGMNCTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFF 367

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 368 EKRVGEYQRMGVMS 381


>gi|322491821|emb|CBZ27094.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 392

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N       H+  K  +++   ++ +A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFF
Sbjct: 307 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFF 364

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 365 EKKVGEYQKAGVMS 378


>gi|119174781|ref|XP_001239725.1| hypothetical protein CIMG_09346 [Coccidioides immitis RS]
          Length = 408

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        +   +  + ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFSHLRH-------RPGPEAVQAIITEAVEIEKEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 313 TDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMD-NISLSGKTNFF 370

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 371 EKRVGDYQKAGVM 383


>gi|121713826|ref|XP_001274524.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
 gi|119402677|gb|EAW13098.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
          Length = 405

 Score =  183 bits (465), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPDKKVVEDIIVEAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  + NPF +M E I L  + NFF
Sbjct: 309 TDALPVALLGMNSKLMCQYIEFVADRLLVALGNKKYYN-SPNPFDFM-ESISLAGKTNFF 366

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 367 EKRVGDYQKAGVM 379


>gi|72008642|ref|XP_780110.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           isoform 1 [Strongylocentrotus purpuratus]
 gi|115928579|ref|XP_001179668.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           [Strongylocentrotus purpuratus]
          Length = 412

 Score =  183 bits (465), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  ++  + ++ EA  +E  + 
Sbjct: 270 MPGLTFSNELISRDEGLHCDFACLMFK-------HLNNKPDEEHVQGIIKEAVAIEQEFL 322

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA   ++Y++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 323 TDALPCSLIGMNAVLMKRYIEFVADRLLVELGCGKIWK-VENPFDFM-ENISLEGKTNFF 380

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 381 EKRVGEYQKMGVMS 394


>gi|148232385|ref|NP_001085389.1| ribonucleotide reductase M2, gene 1 [Xenopus laevis]
 gi|48735122|gb|AAH72071.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score =  183 bits (465), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  + 
Sbjct: 269 MPGLTFSNELISRDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFL 321

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFF
Sbjct: 322 TEALPVELIGMNCTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFF 379

Query: 121 ETRVTEYQQGAGL 133
           E +V EYQ+   +
Sbjct: 380 EKKVGEYQKMGVM 392


>gi|303314521|ref|XP_003067269.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240106937|gb|EER25124.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320037571|gb|EFW19508.1| ribonucleoside-diphosphate reductase small subunit [Coccidioides
           posadasii str. Silveira]
          Length = 408

 Score =  183 bits (465), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        +   +  + ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFSHLRH-------RPGPEAVQAIITEAVEIEKEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 313 TDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKFYNAT-NPFDFMD-NISLSGKTNFF 370

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 371 EKRVGDYQKAGVM 383


>gi|118087248|ref|XP_418364.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 353

 Score =  183 bits (465), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 75/133 (56%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       +L  +  +++ R ++  A  +E  + 
Sbjct: 216 MPGLTFSNELISRDEGLHCDFACLMFH-------YLVNRPSEERVREIIVNAVEIEQEFL 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F + ENPF +M E I L+ + NFF
Sbjct: 269 TEALPVGLIGMNCTLMKQYIEFVADRLLMELGFSKVF-HAENPFDFM-ENISLEGKTNFF 326

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 327 EKRVSEYQRFAVM 339


>gi|10432587|dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes]
          Length = 418

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE +H +F   + + ++   PH  T         ++ EA  +E  + 
Sbjct: 275 MPGLAFSNELISRDEGMHTDFACLLFSHLR-RRPHPDT------VERIIKEAVAIEQEFL 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + L+  + NPF +M  +I L+ + NFF
Sbjct: 328 TDALPVSLIGMNATLMCQYIEFVADRLLVALGNKKLYN-STNPFDFMD-MISLQGKTNFF 385

Query: 121 ETRVTEYQQGAG 132
           E RV++Y +   
Sbjct: 386 EKRVSDYSKAGV 397


>gi|148705043|gb|EDL36990.1| ribonucleotide reductase M2 [Mus musculus]
          Length = 411

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ R ++  A  +E  + 
Sbjct: 274 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFL 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 327 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFF 384

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 385 EKRVGEYQRMGVMS 398


>gi|2500209|sp|Q60561|RIR2_MESAU RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|49650|emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus]
          Length = 386

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVQEIITNAVRIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 364 EKRVGEYQRMGVMS 377


>gi|148230557|ref|NP_001080772.1| ribonucleotide reductase M2 polypeptide [Xenopus laevis]
 gi|28839018|gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis]
          Length = 386

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++   ++  A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFR-------HLVHKPSEERVVQLITNAVQIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK   NPF +M E I L+ + NFF
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFNKVFK-ASNPFDFM-ENISLEGKTNFF 359

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 360 EKRVGEYQKMGVMS 373


>gi|327261311|ref|XP_003215474.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 2 [Anolis carolinensis]
          Length = 390

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIITNAVRIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVNLIGMNCTLMKQYIEFVADRLILELGFNKIYK-AENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 364 EKRVGEYQRMGVMS 377


>gi|4557845|ref|NP_001025.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Homo
           sapiens]
 gi|400979|sp|P31350|RIR2_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|36155|emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens]
 gi|251637|gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens]
 gi|12804875|gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|14029165|gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens]
 gi|20988810|gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|62702173|gb|AAX93099.1| unknown [Homo sapiens]
 gi|123981920|gb|ABM82789.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|123996753|gb|ABM85978.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|189053955|dbj|BAG36462.1| unnamed protein product [Homo sapiens]
 gi|261861600|dbj|BAI47322.1| ribonucleotide reductase M2 [synthetic construct]
          Length = 389

 Score =  182 bits (464), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 252 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 362

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 363 EKRVGEYQRMGVMS 376


>gi|145249942|ref|XP_001401310.1| ribonucleoside-diphosphate reductase small chain [Aspergillus niger
           CBS 513.88]
 gi|134081995|emb|CAK46680.1| unnamed protein product [Aspergillus niger]
          Length = 396

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q    ++ EA  +E  + 
Sbjct: 251 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVGIEQEFL 303

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 304 TDALPVALLGMNSKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ESISLAGKTNFF 361

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 362 EKRVGDYQKAGVM 374


>gi|18859327|ref|NP_571525.1| ribonucleoside-diphosphate reductase subunit M2 [Danio rerio]
 gi|292624782|ref|XP_002665783.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Danio rerio]
 gi|3914657|sp|P79733|RIR2_DANRE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase protein R2 class
           I; AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1695831|gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio]
 gi|27881838|gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|56207929|emb|CAI21240.1| ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|182889152|gb|AAI64707.1| Rrm2 protein [Danio rerio]
          Length = 386

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  ++  + ++  A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFK-------HLINKPSEETVKKIIMNAVEIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    +QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFF
Sbjct: 302 TDALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFF 359

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 360 EKRVGEYQRMGVMS 373


>gi|255530602|ref|YP_003090974.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
 gi|255343586|gb|ACU02912.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
          Length = 324

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE  H  F   +   +K        K  Q++   ++ +A  +E  + 
Sbjct: 185 MPGLTFSNELISRDEGSHCEFACLLYGMLK-------NKLSQEQVHGIIRDAVEIEKEFV 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R   ++G   ++  T NPF +M E+I L+ + NFF
Sbjct: 238 TDALPVALIGMNAKLMSQYIEFVADRWLQELGYSKIYNAT-NPFDFM-EMISLQGKTNFF 295

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   L 
Sbjct: 296 EKRVGDYQKSGVLT 309


>gi|322493026|emb|CBZ28311.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 388

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N       H+  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFI 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFF
Sbjct: 303 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFF 360

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 361 EKKVGEYQKAGVMS 374


>gi|289620013|emb|CBI53457.1| unnamed protein product [Sordaria macrospora]
          Length = 410

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQLIQDIIVDAVRIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFF
Sbjct: 313 TEALPCALLGMNADLMKQYIEFVADRLLVALGNEKVYRST-NPFDFM-ENISLGGKTNFF 370

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   + 
Sbjct: 371 EKRVADYQKAGVMN 384


>gi|302409182|ref|XP_003002425.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
 gi|261358458|gb|EEY20886.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
          Length = 414

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  + 
Sbjct: 264 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQTVQDIVTDAVNIEQEFL 316

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+NA   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFF
Sbjct: 317 TEALPCGLLGMNATLMKQYIEFVADRLLVALGNEKVYKAT-NPFDFM-ENISLGGKTNFF 374

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 375 EKRVADYQKAGVM 387


>gi|154337607|ref|XP_001565036.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134062075|emb|CAM45178.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 392

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N       H+  K  +++   ++ +A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFF
Sbjct: 307 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFF 364

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 365 EKKVGEYQKAGVMS 378


>gi|242777635|ref|XP_002479074.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218722693|gb|EED22111.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 406

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +   +    ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPNPKVIEDIIVDAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 309 TDALPCSLLGMNSKLMCQYIEFVADRLLVALGNKKYYNST-NPFDFM-ENISLAGKTNFF 366

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   + 
Sbjct: 367 EKRVGDYQKAGVMN 380


>gi|212533263|ref|XP_002146788.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
 gi|210072152|gb|EEA26241.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
          Length = 406

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL T+   +    ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHTDFACMLFS-------HLNTRPNPKVIEDIIVDAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 309 TDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKYYNAT-NPFDFM-ENISLAGKTNFF 366

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   + 
Sbjct: 367 EKRVGDYQKAGVMN 380


>gi|169613737|ref|XP_001800285.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
 gi|111061216|gb|EAT82336.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
          Length = 409

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +        T+  +   + ++ EA  +E  + 
Sbjct: 255 MPGLTFSNELISRDEGMHTDFACLLFSLL-------NTRPSKDAVKAIITEAVEIEQEFL 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+    QY++F+A+R    +G   ++  T NPF +M E I L  + NFF
Sbjct: 308 TEALPCALLGMNSTLMCQYIEFVADRLLLALGNTKVYNAT-NPFDFM-ENISLAGKTNFF 365

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 366 EKRVGDYQKAGVM 378


>gi|226294144|gb|EEH49564.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb18]
          Length = 325

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        +   +  + ++ EA  +E  + 
Sbjct: 174 MPGLTFSNELISRDEGLHTDFACLLFSHLRH-------RPSPEAVQKIITEAVAIEQEFL 226

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M   I L  + NFF
Sbjct: 227 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMD-NISLTGKTNFF 284

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 285 EKRVGDYQKAGVM 297


>gi|75076588|sp|Q4R741|RIR2B_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|67969468|dbj|BAE01083.1| unnamed protein product [Macaca fascicularis]
          Length = 351

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVQIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKIFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 325 EKRVSEYQRFAVM 337


>gi|88682973|gb|AAI05512.1| RRM2 protein [Bos taurus]
          Length = 338

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 201 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFL 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 254 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 311

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 312 EKRVGEYQRMGVMS 325


>gi|328855581|gb|EGG04707.1| hypothetical protein MELLADRAFT_49061 [Melampsora larici-populina
           98AG31]
          Length = 385

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +    PH  T       + ++ +A  +E  + 
Sbjct: 236 MPGLTFSNELISRDEGLHTDFACLLFSHL-ERRPHPDT------VQAIISQAVEIEKEFL 288

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +   ENPF +M E+I L  + NFF
Sbjct: 289 SDALPCKLIGMNADLMCQYIEFVADRLLVALGNDKFYN-AENPFDFM-EMISLSGKTNFF 346

Query: 121 ETRVTEYQQGAGLK 134
           E RV++Y +   + 
Sbjct: 347 EKRVSDYAKAGVMT 360


>gi|266918|sp|P07201|RIR2_SPISO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit;
           AltName: Full=p41
 gi|10342|emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula
           solidissima]
          Length = 384

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  Q++   ++ EA  +E  + 
Sbjct: 244 MPGLTFSNELISRDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFL 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++  + L+   ENPF +M E I L+ + NFF
Sbjct: 297 TEALPCRLIGMNCDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFF 354

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 355 EKRVGEYQKMGVMS 368


>gi|7106399|ref|NP_033130.1| ribonucleoside-diphosphate reductase subunit M2 [Mus musculus]
 gi|132626|sp|P11157|RIR2_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|22218698|pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|22218699|pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|52696260|pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Oxidizing Conditions. A Fully Occupied
           Dinuclear Iron Cluster.
 gi|52696261|pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Reducing Conditions. A Fully Occupied
           Dinuclear Iron Cluster And Bound Acetate.
 gi|157834262|pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse
 gi|50720|emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus]
 gi|200768|gb|AAA40062.1| ribonucleotide reductase subunit M2 [Mus musculus]
 gi|26354034|dbj|BAC40647.1| unnamed protein product [Mus musculus]
 gi|54887418|gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus]
 gi|74139292|dbj|BAE40793.1| unnamed protein product [Mus musculus]
 gi|74151119|dbj|BAE27683.1| unnamed protein product [Mus musculus]
 gi|74179887|dbj|BAE36508.1| unnamed protein product [Mus musculus]
 gi|74188932|dbj|BAE39238.1| unnamed protein product [Mus musculus]
 gi|74189151|dbj|BAE39331.1| unnamed protein product [Mus musculus]
 gi|74206394|dbj|BAE24918.1| unnamed protein product [Mus musculus]
 gi|74211991|dbj|BAE40165.1| unnamed protein product [Mus musculus]
          Length = 390

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ R ++  A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 364 EKRVGEYQRMGVMS 377


>gi|76630263|ref|XP_880783.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 3 [Bos
           taurus]
 gi|297480612|ref|XP_002691528.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 2 [Bos
           taurus]
 gi|296482362|gb|DAA24477.1| ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus]
          Length = 341

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 204 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFL 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 257 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 314

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 315 EKRVGEYQRMGVMS 328


>gi|301772278|ref|XP_002921557.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Ailuropoda melanoleuca]
          Length = 393

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ R ++  A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVREIIINAVRIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 309 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 366

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 367 EKRVGEYQRMGVMS 380


>gi|293343290|ref|XP_002725449.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Rattus
           norvegicus]
 gi|293355176|ref|XP_002728627.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Rattus
           norvegicus]
          Length = 390

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNAVRIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 364 EKRVGEYQRMGVMS 377


>gi|224007863|ref|XP_002292891.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971753|gb|EED90087.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 297

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +++  + P         +   ++  A  +E  + 
Sbjct: 160 MPGLCFSNELISRDEGLHCDFACLLYSKLVNKLPE-------SRITKIITVAVEIEKEFV 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+     Y++F A+R    +G    +  T NPF WM E+I L+ + NFF
Sbjct: 213 SDALPVELIGMNSKLMCDYIEFCADRLLGALGCSKFYNAT-NPFEWM-EMISLQGKTNFF 270

Query: 121 ETRVTEYQQGAG 132
           E RV EY +   
Sbjct: 271 EKRVGEYAKSGV 282


>gi|154340038|ref|XP_001565976.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134063294|emb|CAM45500.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 388

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N       H+  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFI 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFF
Sbjct: 303 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNATQ-PFDFM-EMISLQGKTNFF 360

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 361 EKKVGEYQKAGVMS 374


>gi|45360749|ref|NP_989048.1| ribonucleotide reductase M2, gene 1 [Xenopus (Silurana) tropicalis]
 gi|38174078|gb|AAH61353.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 378

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  + 
Sbjct: 241 MPGLTFSNELISRDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFL 293

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFF
Sbjct: 294 TEALPVELIGMNCKLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFF 351

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 352 EKKVAEYQKMGVMS 365


>gi|116191729|ref|XP_001221677.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
 gi|88181495|gb|EAQ88963.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
          Length = 409

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q    ++ +A  +E  + 
Sbjct: 259 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQIIEDIIVDAVRIEQEFL 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFF
Sbjct: 312 TEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYRST-NPFDFM-ENISLGGKTNFF 369

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 370 EKRVGEYQKAGVM 382


>gi|159465835|ref|XP_001691128.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
 gi|158279814|gb|EDP05574.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
          Length = 394

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +        T+  + + + ++ EA  +E  + 
Sbjct: 255 MPGLTFSNELISRDEGLHCDFACMLFSML-------NTRIDETRVKQIIVEAVEIEQEFC 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+    QY+QF+A+R    +G    +    NPF +M E+I L+ + NFF
Sbjct: 308 TEALPVDLIGMNSRLMAQYIQFVADRLLVSLGCAKQYNVV-NPFEFM-EMISLQGKTNFF 365

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 366 EKRVGDYQKNGVM 378


>gi|110763195|ref|XP_397443.3| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
           1 [Apis mellifera]
          Length = 384

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K   ++  +++ +A  +E  + 
Sbjct: 247 MPGLTFSNELISRDEGLHCDFACLMFK-------HIVQKPSCERVTSIIKDAVKIEQEFL 299

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G + ++  +ENPF +M E I L+ + NFF
Sbjct: 300 TDALPVEMIGMNCKLMCQYIEFVADRLLVELGCKKIY-MSENPFDFM-EHISLEGKTNFF 357

Query: 121 ETRVTEYQQGAGLKW 135
           E +V EYQ+   ++ 
Sbjct: 358 EKKVGEYQKWGVMQD 372


>gi|110636874|ref|YP_677081.1| ribonucleoside-diphosphate reductase 1 subunit beta [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110279555|gb|ABG57741.1| ribonucleoside-diphosphate reductase 1, beta subunit [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 324

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 8/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   +  +       +  K   ++   ++ EA  +E  + 
Sbjct: 186 MPGLSFSNELISRDEGLHCDFACLLYTKY------INNKLPAERVIQIILEAVEIEKEFV 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+NA   +QY++F+A+R    +G+   F  T NPF +M E+I L+ + NFF
Sbjct: 240 TDSLPVDLIGMNARLMQQYIEFVADRLLVALGVPKQFNAT-NPFDFM-EMISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+   +
Sbjct: 298 EKRVSEYQKSGVM 310


>gi|85109237|ref|XP_962820.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
 gi|30316285|sp|Q9C167|RIR2_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|16273691|gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa]
 gi|28924456|gb|EAA33584.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
          Length = 410

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q  + ++ +A  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQLIQEIIVDAVRIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA   +QY++F+A+R    +G E +++ + NPF +M E I L  + NFF
Sbjct: 313 TEALPCALLGMNADLMKQYIEFVADRLLVALGNEKIYR-STNPFDFM-ENISLGGKTNFF 370

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   + 
Sbjct: 371 EKRVGDYQKAGVMN 384


>gi|295670491|ref|XP_002795793.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
 gi|226284878|gb|EEH40444.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
          Length = 325

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        +   +  + ++ EA  +E  + 
Sbjct: 174 MPGLTFSNELISRDEGLHTDFACLLFSHLRH-------RPSPEAVQKIITEAVAIEQEFL 226

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M   I L  + NFF
Sbjct: 227 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMD-NISLTGKTNFF 284

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 285 EKRVGDYQKAGVM 297


>gi|42544136|ref|NP_056528.2| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Homo
           sapiens]
 gi|114621161|ref|XP_001153916.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) isoform 2
           [Pan troglodytes]
 gi|74727333|sp|Q7LG56|RIR2B_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|261278726|pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2
 gi|261278727|pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2
 gi|7229086|dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens]
 gi|7229115|dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens]
 gi|45259569|dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo
           sapiens]
 gi|52545612|emb|CAB70703.2| hypothetical protein [Homo sapiens]
 gi|63055293|gb|AAY29059.1| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|80473666|gb|AAI08262.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|109659128|gb|AAI17497.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|119612247|gb|EAW91841.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_b [Homo
           sapiens]
 gi|120660296|gb|AAI30629.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|190689549|gb|ACE86549.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|190690911|gb|ACE87230.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|261859014|dbj|BAI46029.1| ribonucleotide reductase M2 B [synthetic construct]
 gi|313882916|gb|ADR82944.1| ribonucleotide reductase M2 B (TP53 inducible) [synthetic
           construct]
          Length = 351

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 325 EKRVSEYQRFAVM 337


>gi|322709430|gb|EFZ01006.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           anisopliae ARSEF 23]
          Length = 414

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +       + HL  +  +Q    ++ +A  +E  + 
Sbjct: 264 MPGLTFSNELISRDEGLHTDFACLL-------HSHLKNRASKQVIYDIITDAVAIEQEFL 316

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFF
Sbjct: 317 TEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFF 374

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   L
Sbjct: 375 EKRVGDYQKAGVL 387


>gi|146090952|ref|XP_001466403.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|321399462|emb|CBZ08664.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 392

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N       H+  K  +++   ++ +A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFF
Sbjct: 307 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFF 364

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 365 EKKVGEYQKAGVMS 378


>gi|145349720|ref|XP_001419276.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579507|gb|ABO97569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 329

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +         K  ++  R ++ EA  +E  + 
Sbjct: 189 MPGLTFSNELISRDEGLHRDFACLLFSML-------NNKPSEETIRKIVTEAVEIEKEFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   VG+NA     Y++++A+     +GL   +  T NPF WM E+I L+ + NFF
Sbjct: 242 CDSLPCALVGMNAGMMSDYIEYVADHLFCSLGLAKEYN-TTNPFDWM-ELISLQGKTNFF 299

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 300 EKRVGEYQKAGVMN 313


>gi|73544537|ref|XP_848163.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|321438516|emb|CBZ12275.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 388

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N       H+  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFI 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFF
Sbjct: 303 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFF 360

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 361 EKRVGEYQKAGVMS 374


>gi|115387427|ref|XP_001211219.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
 gi|114195303|gb|EAU37003.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
          Length = 401

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q    ++ EA  +E  + 
Sbjct: 255 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQVVEDIIVEAVAIEKEFL 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G    F ++ NPF +M E I L  + NFF
Sbjct: 308 TDALPVALLGMNSKLMCQYIEFVADRLLVALGNNKYF-HSTNPFDFM-ESISLAGKTNFF 365

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 366 EKRVGDYQKAGVM 378


>gi|149728153|ref|XP_001502384.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Equus caballus]
          Length = 425

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 288 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFL 340

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 341 TEALPVRLIGMNCALMKQYIEFVADRLLLELGFNKVFR-VENPFDFM-ENISLEGKTNFF 398

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 399 EKRVGEYQRMGVMS 412


>gi|197101489|ref|NP_001125944.1| ribonucleoside-diphosphate reductase subunit M2 B [Pongo abelii]
 gi|75041724|sp|Q5R9G0|RIR2B_PONAB RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|55729743|emb|CAH91600.1| hypothetical protein [Pongo abelii]
          Length = 351

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 325 EKRVSEYQRFAVM 337


>gi|74207686|dbj|BAE40088.1| unnamed protein product [Mus musculus]
          Length = 390

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ R ++  A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPAEQRVREIITNAVRIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 364 EKRVGEYQRMGVMS 377


>gi|49899161|gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
          Length = 386

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL +K  ++  + ++  A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFK-------HLISKPSEETVKKIIMNAVEIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    +QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFF
Sbjct: 302 TDALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYR-VENPFDFM-ENISLEGKTNFF 359

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 360 EKRVGEYQRMGVMS 373


>gi|289177076|ref|NP_001165949.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Homo
           sapiens]
 gi|55631160|ref|XP_528204.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) isoform 3
           [Pan troglodytes]
 gi|42794058|dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form
           [Homo sapiens]
 gi|119612246|gb|EAW91840.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_a [Homo
           sapiens]
          Length = 299

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 162 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 214

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 215 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 272

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 273 EKRVSEYQRFAVM 285


>gi|76630259|ref|XP_584910.2| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297480610|ref|XP_002691527.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|296482361|gb|DAA24476.1| ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus]
          Length = 389

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 252 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFL 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 362

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 363 EKRVGEYQRMGVMS 376


>gi|326437649|gb|EGD83219.1| ribonucleotide reductase M2 B [Salpingoeca sp. ATCC 50818]
          Length = 408

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 74/133 (55%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  + I RDE LH +F   + + +  + P       +++   ++ +A  +E  + 
Sbjct: 268 MPGLTQSNELISRDEGLHCDFACLMFSMLHKKPP-------KERVIGIIMDAVEIEQEFL 320

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+    +Y++F+++R    +G + ++  T NPFP+M E I ++ + NFF
Sbjct: 321 TEALPVSLLGMNSTLMREYIEFVSDRLLVSLGYDKVYNAT-NPFPFM-ENISIEGKTNFF 378

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+   +
Sbjct: 379 ERRVSEYQKSGVM 391


>gi|258567064|ref|XP_002584276.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
 gi|237905722|gb|EEP80123.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
          Length = 401

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + I+        +        ++ EA  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHTDFACLLFSHIRH-------RPTPAAVEAIITEAVEIEKEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  + +  NPF +M   I L  + NFF
Sbjct: 306 TDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKFY-HATNPFDFMD-NISLAGKTNFF 363

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 364 EKRVGDYQKAGVM 376


>gi|41054952|ref|NP_955770.1| ribonucleoside-diphosphate reductase subunit M2 B [Mus musculus]
 gi|81885688|sp|Q6PEE3|RIR2B_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|34786000|gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
 gi|74218244|dbj|BAE23760.1| unnamed protein product [Mus musculus]
          Length = 351

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  + + R ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 325 EKRVSEYQRFAVM 337


>gi|67515571|ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|40746089|gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|259489743|tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8]
           [Aspergillus nidulans FGSC A4]
          Length = 406

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  F  T NPF +M E I L  + NFF
Sbjct: 310 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKYFNAT-NPFDFM-ESISLAGKTNFF 367

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 368 EKRVGDYQKAGVM 380


>gi|327269406|ref|XP_003219485.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Anolis carolinensis]
          Length = 414

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 277 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 329

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 330 TEALPVGLIGMNCTLMKQYIEFVADRLLLELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 387

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 388 EKRVSEYQRFAVM 400


>gi|225561749|gb|EEH10029.1| ribonucleotide reductase M2 B [Ajellomyces capsulatus G186AR]
 gi|240275354|gb|EER38868.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H143]
 gi|325091193|gb|EGC44503.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H88]
          Length = 413

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        +   +    ++ EA  +E  + 
Sbjct: 262 MPGLTFSNELISRDEGLHTDFACLLFSHLRH-------RPSPEAVEKIITEAVTIEQEFL 314

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M   I L  + NFF
Sbjct: 315 SDALPVALLGMNAKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMD-NISLAGKTNFF 372

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 373 EKRVGDYQKAGVM 385


>gi|148234092|ref|NP_001079369.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus laevis]
 gi|27371032|gb|AAH41209.1| MGC52676 protein [Xenopus laevis]
          Length = 386

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHCDFACLMFK-------HLIRKPSEERVVELITDAVQIEQEFL 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G + +FK T NPF +M E I L+ + NFF
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFKKVFKAT-NPFDFM-ENISLEGKTNFF 359

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 360 EKKVGEYQKMGVMS 373


>gi|4894211|gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max]
          Length = 339

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++             +   ++HEA  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------PLISDQVHKLVHEAVEIETEFV 250

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +   ENPF WM E I L+ + NFF
Sbjct: 251 CDALPCALIGMNSVLMSQYIKFVADRLLVALGYQRKYN-VENPFDWM-EFISLQGKANFF 308

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 309 ERRVGDYQKASVMS 322


>gi|119478853|ref|XP_001259462.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
 gi|119407616|gb|EAW17565.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
          Length = 405

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNHRPDKKVVEDIIVEAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+    QY++F+A+R    +G +  +  + NPF +M E I L  + NFF
Sbjct: 309 TEALPVALLGMNSKLMCQYIEFVADRLLVALGNKKYYN-SSNPFDFM-ESISLAGKTNFF 366

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 367 EKRVGDYQKAGVM 379


>gi|298707394|emb|CBJ30029.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 380

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  ++  + P        ++   ++ +A  +E  + 
Sbjct: 243 MPGLCFSNELISRDEGLHTDFACLLFRKLVNKLP-------VERVAEIICDAVDIEKEFI 295

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N+    QY++F A+R   ++G E  +  T NPF WM E+I L+ + NFF
Sbjct: 296 TSALPVELIGMNSALMRQYIEFCADRLLMELGCEKKYNST-NPFDWM-EMISLQGKTNFF 353

Query: 121 ETRVTEYQQGAG 132
           E RV EY +   
Sbjct: 354 EKRVGEYSKSGV 365


>gi|300709535|ref|YP_003735349.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
 gi|299123218|gb|ADJ13557.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
          Length = 330

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/135 (51%), Positives = 97/135 (71%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG+ EQ++YIMRDESLHLNFG+D+IN ++ EN  +WT  F+ +   +L EA  LE  YA
Sbjct: 197 MVGVGEQFEYIMRDESLHLNFGVDLINTVREENSGIWTDVFEAEIEGLLREAVELERTYA 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E  P+  +G+      +Y++++A+RR  Q+G+EP++  T+NPFPWM+E +DL KEKNFF
Sbjct: 257 REACPEEVLGMGPAQFAEYVEYVADRRLDQLGMEPVYD-TDNPFPWMAEQVDLNKEKNFF 315

Query: 121 ETRVTEYQQGAGLKW 135
           ET V EYQ G  L+W
Sbjct: 316 ETNVAEYQSGGSLEW 330


>gi|194673004|ref|XP_607398.4| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297482473|ref|XP_002692807.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Bos
           taurus]
 gi|296480530|gb|DAA22645.1| ribonucleotide reductase M2 polypeptide-like [Bos taurus]
          Length = 351

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 325 EKRVSEYQRFAVM 337


>gi|77748199|gb|AAI06683.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K  +Q+ R ++ +A  +E  + 
Sbjct: 269 MPGLTFSNELISRDEGLHTDFACLLFK-------HVVHKPSEQRVREIIIDAVKIEQEFL 321

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G + +FK +ENPF +M E I L+ + NFF
Sbjct: 322 IEALPVELIGMNCTLMKQYIEFVADRLLLELGFKKIFK-SENPFDFM-ENISLEGKTNFF 379

Query: 121 ETRVTEYQQGAGL 133
           E +V EYQ+   +
Sbjct: 380 EKKVGEYQKMGVM 392


>gi|327403795|ref|YP_004344633.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
 gi|327319303|gb|AEA43795.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
          Length = 324

 Score =  181 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   +  +      HL  +  +++ + ++ +A  +E  + 
Sbjct: 186 MPGLSFSNELISRDEGLHCDFACLLYTK------HLIHQLSKEQVQEIILDAVEIEKEFV 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R   ++G   +F  T NPF +M  +I ++ + NFF
Sbjct: 240 TDALPVKLIGMNADLMAQYIEFVADRLLTELGNPKVFN-TTNPFDFMD-MISIQGKTNFF 297

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 298 EKRVAEYQKSGVMS 311


>gi|321476700|gb|EFX87660.1| hypothetical protein DAPPUDRAFT_306462 [Daphnia pulex]
          Length = 378

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++   +++ A  +E  + 
Sbjct: 239 MPGLTFSNELISRDEGLHTDFACVMFK-------HLVNKPPKERIIEIINNAVKIEQEFL 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G   L+  +ENPF +M E I L+ + NFF
Sbjct: 292 TDALPVEMIGMNCRLMRQYIEFVADRLLLELGCTKLYN-SENPFDFM-EHISLEGKTNFF 349

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 350 EKKVGEYQKAGVMN 363


>gi|301097698|ref|XP_002897943.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262106388|gb|EEY64440.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 360

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE +H +F   + +++  + P         +   ++ +A  +E  + 
Sbjct: 223 MPGLSFSNEMISRDEGMHTDFACLMYSKLVNKLPE-------SRVHEIIRDAVAIEHEFV 275

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R  + +G+  ++   +NPF WM  +I L+ + NFF
Sbjct: 276 CDSLPVELIGMNSALMCQYIEFVADRLLYSLGVSKIYN-VKNPFDWMD-MISLQGKTNFF 333

Query: 121 ETRVTEYQQGAG 132
           E RV EY +   
Sbjct: 334 EKRVGEYSKAGV 345


>gi|3220181|gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 354

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N       H+  K  +++   ++ +A  +E  + 
Sbjct: 215 MPGLTFSNELISRDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFI 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFF
Sbjct: 269 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNSTQ-PFDFM-EMISLQGKTNFF 326

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 327 EKKVGEYQKAGVMS 340


>gi|70997335|ref|XP_753417.1| ribonucleotide reductase small subunit RnrA [Aspergillus fumigatus
           Af293]
 gi|66851053|gb|EAL91379.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus Af293]
 gi|159126856|gb|EDP51972.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus A1163]
          Length = 405

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNHRPDKKVIEDIIVEAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  F  + NPF +M E I L  + NFF
Sbjct: 309 TDALPVALLGMNSKLMCQYIEFVADRLLVALGNKKYFN-SPNPFDFM-ESISLAGKTNFF 366

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 367 EKRVGDYQKAGVM 379


>gi|311748425|ref|ZP_07722210.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
 gi|126576938|gb|EAZ81186.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
          Length = 326

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  +      H+     ++  R ++ +A  +E  + 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACHLYTK------HVVNPLPKETVREIIIDAVKIEKEFV 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R   ++  E ++  T NPF +M  +I L+ + NFF
Sbjct: 238 TDALPVRLIGMNSDLMCQYIEFVADRLLLELDCEKVWNST-NPFDFMD-MISLQGKTNFF 295

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   +K
Sbjct: 296 EKRVGDYQKAGVMK 309


>gi|322693757|gb|EFY85606.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           acridum CQMa 102]
          Length = 411

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +       + HL  +  +Q    ++ +A  +E  + 
Sbjct: 261 MPGLTFSNELISRDEGLHTDFACLL-------HSHLKNRASKQIIHDIITDAVAIEKEFL 313

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFF
Sbjct: 314 TEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYK-TSNPFDFM-ENISLGGKTNFF 371

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   L
Sbjct: 372 EKRVGDYQKAGVL 384


>gi|3914644|sp|O46310|RIR2_LEIAM RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase M2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2828563|gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 345

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N       H+  K  +++   ++ +A  +E  + 
Sbjct: 206 MPGLTFSNELISRDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFI 259

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFF
Sbjct: 260 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFF 317

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 318 EKRVGEYQKAGVMS 331


>gi|302843870|ref|XP_002953476.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
 gi|300261235|gb|EFJ45449.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
          Length = 400

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +  +         + + + ++ EA  +E  + 
Sbjct: 261 MPGLTFSNELISRDEGLHCDFACLLYGMLSKQL-------EESRIKEIICEAVDIENEFC 313

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G    +  T NPF +M  +I L+ + NFF
Sbjct: 314 TDALPVDLIGMNSRLMAQYIEFVADRLLVALGCSKAYNVT-NPFDFMD-MISLQGKTNFF 371

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 372 EKRVGDYQKSGVM 384


>gi|323450429|gb|EGB06310.1| hypothetical protein AURANDRAFT_65685 [Aureococcus anophagefferens]
          Length = 349

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 70/132 (53%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE +H +F   + ++++ + P        +    ++ +A  +E  + 
Sbjct: 212 MPGLSFSNELISRDEGMHCDFACLLYSKLRNKLP-------VETINALIGDAVTIEKEFV 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N+ +  QY++F A+R    +G   L++ T NPF WM E+I L+ + NFF
Sbjct: 265 VSALPVELIGMNSRTMCQYIEFCADRLLLALGCPKLYEAT-NPFDWM-ELISLQGKTNFF 322

Query: 121 ETRVTEYQQGAG 132
           E RV EY +   
Sbjct: 323 EKRVGEYAKSGV 334


>gi|73979721|ref|XP_540076.2| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
           (Ribonucleotide reductase small chain) isoform 1 [Canis
           familiaris]
          Length = 394

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 310 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 367

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 368 EKRVGEYQRMGVMS 381


>gi|291388369|ref|XP_002710634.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Oryctolagus cuniculus]
          Length = 339

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 202 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 254

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 255 TEALPVGLIGMNCILMKQYIEFVADRLLMELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 312

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 313 EKRVSEYQRFAVM 325


>gi|75076796|sp|Q4R7Q7|RIR2_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|67969020|dbj|BAE00865.1| unnamed protein product [Macaca fascicularis]
          Length = 389

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 252 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRVEQEFL 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 362

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 363 EKRVGEYQRMGVMS 376


>gi|310798394|gb|EFQ33287.1| ribonucleotide reductase [Glomerella graminicola M1.001]
          Length = 413

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        +  +Q  + ++ +A  +E  + 
Sbjct: 263 MPGLTFSNELISRDEGLHTDFACLLYSHLK-------NRPSKQVIQDIIVDAVQIEQEFL 315

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G + ++K + NPF +M E I L  + NFF
Sbjct: 316 TEALPCALLGMNSNLMKQYIEFVADRLLVALGNDKVYK-SSNPFDFM-ENISLGGKTNFF 373

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   + 
Sbjct: 374 EKRVADYQKAGVMN 387


>gi|312381384|gb|EFR27142.1| hypothetical protein AND_06323 [Anopheles darlingi]
          Length = 390

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++   ++ +A ++E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------YLVQKPSRKRVTDIIRDAVMIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G E ++  T+NPF +M E I L+ + NFF
Sbjct: 306 TKALPVDMLGMNCELMSQYIEFVADRLLVELGCEKVYN-TKNPFSFM-EFISLEGKTNFF 363

Query: 121 ETRVTEYQQGAGL 133
           E +V EYQ+   +
Sbjct: 364 EKKVGEYQKWGVM 376


>gi|114621164|ref|XP_001153859.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
 gi|119612248|gb|EAW91842.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_c [Homo
           sapiens]
 gi|194385642|dbj|BAG65196.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 160 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 213 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 270

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 271 EKRVSEYQRFAVM 283


>gi|213511642|ref|NP_001133495.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
 gi|209154228|gb|ACI33346.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
          Length = 387

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  ++    ++  A  +E  + 
Sbjct: 250 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSKETVTKLIRNAVEIEQEFL 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G + +++  ENPF +M E I L+ + NFF
Sbjct: 303 TKALPVKLIGMNCDLMTQYIEFVADRLMLELGFDKIYR-VENPFDFM-ENISLEGKTNFF 360

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 361 EKRVGEYQRMGVMS 374


>gi|331245491|ref|XP_003335382.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
 gi|309314372|gb|EFP90963.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 380

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +    PH  T       + ++ +A  +E  + 
Sbjct: 231 MPGLTFSNELISRDEGLHTDFACLLFTHL-ERRPHPDT------VQAIIAQAVEIEKEFL 283

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T NPF +M E+I L  + NFF
Sbjct: 284 SDALPCKLIGMNADLMCQYIEFVADRLLVALGNEKFYNAT-NPFDFM-EMISLSGKTNFF 341

Query: 121 ETRVTEYQQGAGLK 134
           E RV++Y +   + 
Sbjct: 342 EKRVSDYAKAGVMT 355


>gi|118089009|ref|XP_001231545.1| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 1 [Gallus gallus]
          Length = 392

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ + ++  A L+E  + 
Sbjct: 255 MPGLTFSNELISRDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFL 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 308 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFF 365

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 366 EKRVGEYQRMGVMS 379


>gi|302665732|ref|XP_003024474.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
 gi|291188529|gb|EFE43863.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
          Length = 529

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 381 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFL 433

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 434 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFF 491

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 492 EKRVGDYQKAGVM 504


>gi|194036959|ref|XP_001925036.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Sus
           scrofa]
          Length = 351

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  + + R ++  A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEARVREIIVNAVEIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 325 EKRVSEYQRFAVM 337


>gi|223996990|ref|XP_002288168.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975276|gb|EED93604.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +++  + P         +   ++  A  +E  + 
Sbjct: 198 MPGLCFSNELISRDEGLHCDFACLIYSKLVNQLPE-------SRIEEIITNAVEIEKEFV 250

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F A+R    +G +  +    NPF WM E+I L+ + NFF
Sbjct: 251 SDALPVELIGMNSKLMCQYIEFCADRLLGALGCKKHYMAV-NPFEWM-EMISLQGKTNFF 308

Query: 121 ETRVTEYQQGAG 132
           E RV EY +   
Sbjct: 309 EKRVGEYAKSGV 320


>gi|156387377|ref|XP_001634180.1| predicted protein [Nematostella vectensis]
 gi|156221260|gb|EDO42117.1| predicted protein [Nematostella vectensis]
          Length = 341

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  ++  R ++ +A ++E  + 
Sbjct: 204 MPGLTFSNELISRDEGLHCDFACLMYK-------YLVNKPDEETVRGIIKDAVVIEQEFL 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++F+A+R    +  + ++   ENPF +M E I L+ + NFF
Sbjct: 257 TSALPVKLIGMNCALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFF 314

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 315 EKRVGEYQKSGVMS 328


>gi|149279601|ref|ZP_01885730.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
 gi|149229637|gb|EDM35027.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
          Length = 324

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE  H  F   + + +K        K  ++    ++ +A  +E  + 
Sbjct: 185 MPGLTFSNELISRDEGSHCEFACLLYSMLK-------NKLSEEHVHGIIRDAVEIEKEFV 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R   ++G   ++ +  NPF +M E+I L+ + NFF
Sbjct: 238 TDALPVALIGMNAKLMSQYIEFVADRWLQELGYTKIY-HATNPFDFM-EMISLQGKTNFF 295

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   L 
Sbjct: 296 EKRVGDYQKSGVLT 309


>gi|146090970|ref|XP_001466408.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|134070770|emb|CAM69127.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 388

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N       H+  K  +++   ++ +A  +E  + 
Sbjct: 249 MPGLTFSNELISRDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFI 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFF
Sbjct: 303 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFF 360

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 361 EKKVGEYQKAGVMS 374


>gi|27769295|gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide [Homo sapiens]
          Length = 285

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 148 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 200

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 201 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 258

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 259 EKRVSEYQRFAVM 271


>gi|8101697|gb|AAF72618.1|AF252539_2 ribonucleotide reductase small subunit M2 [Leishmania amazonensis]
          Length = 345

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N       H+  K  +++   ++ +A  +E  + 
Sbjct: 206 MPGLTFSNELISRDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFI 259

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFF
Sbjct: 260 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFF 317

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 318 EKRVGEYQKAGVMS 331


>gi|296421312|ref|XP_002840209.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636423|emb|CAZ84400.1| unnamed protein product [Tuber melanosporum]
          Length = 397

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + N       HL  +  QQ  + ++ EA  +E  + 
Sbjct: 250 MPGLSFSNELISRDEGLHTDFACLLFN-------HLNNRPSQQAVQDIIVEAVGIEQEFL 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G    +  T NPF +M E I L  + NFF
Sbjct: 303 TEALPCALLGMNSKLMKQYIEFVADRLLLSLGNPKFYNAT-NPFDFM-ESISLAGKTNFF 360

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 361 EKRVGDYQKAGVM 373


>gi|50949848|emb|CAH10473.1| hypothetical protein [Homo sapiens]
          Length = 297

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 160 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPPEERVREIIVDAVKIEQEFL 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 213 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 270

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 271 EKRVSEYQRFAVM 283


>gi|149721713|ref|XP_001493623.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) [Equus
           caballus]
          Length = 351

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVDLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 325 EKRVSEYQRFAVM 337


>gi|326797773|ref|YP_004315592.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
 gi|326548537|gb|ADZ76922.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
          Length = 323

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F   + + ++ + P       +++ + ++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGLHCEFACLLYSMLEAKLP-------KERVQEIIIDAVEIEKEFI 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA   +QY++F+A+R   ++G    +  T NPF +M E+I L+ + NFF
Sbjct: 239 TDALPVKLIGMNADLMKQYIEFVADRWLVELGNSKYYNAT-NPFDFM-ELISLQGKTNFF 296

Query: 121 ETRVTEYQQGAG 132
           E RV +YQ+   
Sbjct: 297 EKRVGDYQKSGV 308


>gi|148676854|gb|EDL08801.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
          Length = 297

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  + + R ++ +A  +E  + 
Sbjct: 160 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEDRVREIIADAVQIEQEFL 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 213 TEALPVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFF 270

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 271 EKRVSEYQRFAVM 283


>gi|118383611|ref|XP_001024960.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila]
 gi|89306727|gb|EAS04715.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila SB210]
          Length = 376

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +         K  +++   ++ EA  +E  + 
Sbjct: 239 MPGLTFSNELISRDEGLHTDFACLLYSMLNK-------KLTKEEIYEIITEAVEIEKEFI 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G+   +  ++NPF WM  +I ++ + NFF
Sbjct: 292 SEALPVELIGMNSNMMKQYLEFVADRLLFALGVPKFYN-SKNPFEWMD-MISIQGKTNFF 349

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 350 EKRVGEYQKANVMS 363


>gi|150863757|ref|XP_001382334.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
 gi|149385013|gb|ABN64305.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
          Length = 417

 Score =  180 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +   +    ++ EA  +E  + 
Sbjct: 274 MPGLTFSNELICRDEGLHTDFACLLFS-------HLQNRPDAEIVEKIITEAVKIEKEFF 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M E I L  + NFF
Sbjct: 327 TDALPSSLLGMNAELMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFF 384

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 385 EKRVSDYQKAGVM 397


>gi|170089003|ref|XP_001875724.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
 gi|164648984|gb|EDR13226.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
          Length = 422

 Score =  180 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +K        +   +  + ++ EA  +E  + 
Sbjct: 269 MPGLTFSNELISRDEGMHTDFACLLFSHLKR-------RPHPEVVKHIIVEAVKIEQEFL 321

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T NPF +M  +I L+ + NFF
Sbjct: 322 TDALPVKLIGMNADLMCQYIEFVADRLLVSLGNEKHYNKT-NPFDFMD-MISLQGKTNFF 379

Query: 121 ETRVTEYQQGA 131
           E RV++Y +  
Sbjct: 380 EKRVSDYSKAG 390


>gi|224046583|ref|XP_002198998.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 362

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       +L  +  +++   ++  A  +E  + 
Sbjct: 225 MPGLTFSNELISRDEGLHCDFACLMFH-------YLVNRPSEERVCEIIVNAVEIEQEFL 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F   ENPF +M E I L+ + NFF
Sbjct: 278 TEALPVGLIGMNCTLMKQYIEFVADRLLMELGFSKVFN-VENPFDFM-ENISLEGKTNFF 335

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 336 EKRVSEYQRFAVM 348


>gi|39977011|ref|XP_369893.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
 gi|145016179|gb|EDK00669.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
          Length = 403

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +         +  ++  + ++ +A  +E  + 
Sbjct: 248 MPGLTFSNELISRDEGLHTDFACLLFSLL-------NNRPNKEVVKEIVVDAVKIEQEFL 300

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA   +QY++F+A+R    +G E +++ T NPF +M E I L  + NFF
Sbjct: 301 TEALPCALLGMNANLMKQYIEFVADRLLVALGNEKVYRAT-NPFDFM-ENISLGGKTNFF 358

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 359 EKRVGEYQKAGVM 371


>gi|289582310|ref|YP_003480776.1| ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
 gi|289531863|gb|ADD06214.1| Ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
          Length = 330

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 69/135 (51%), Positives = 96/135 (71%), Gaps = 1/135 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVGI +Q++YIMRDESLH+ FG+D+I+QI++ENP +WT  F  +   ++ EA  LE  YA
Sbjct: 197 MVGIGQQFEYIMRDESLHVGFGVDLIDQIRMENPDVWTDAFGDEVVELITEAVELEKIYA 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           +E  P   +G++A    +Y++ IA+RR  Q+ L   +  T+NPFPW+SE +DL KEKNFF
Sbjct: 257 YEACPDEILGMSADQFAEYVEHIADRRLGQLDLPTQY-GTDNPFPWLSEQVDLNKEKNFF 315

Query: 121 ETRVTEYQQGAGLKW 135
           ET+VTEYQ G  L W
Sbjct: 316 ETQVTEYQSGGSLDW 330


>gi|190896512|gb|ACE96769.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896530|gb|ACE96778.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|91081999|ref|XP_969259.1| PREDICTED: similar to AGAP006818-PA [Tribolium castaneum]
 gi|270007377|gb|EFA03825.1| hypothetical protein TcasGA2_TC013940 [Tribolium castaneum]
          Length = 374

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 73/132 (55%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  +++ ++++ +A  +E  + 
Sbjct: 238 MPGLTFSNELISRDEGLHCDFACLMFS-------HLVQKPSKERIQSIIQDAVKIEKEFL 290

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++G E ++  ++NPF +M+ +I  + + NFF
Sbjct: 291 TEALPVSMIGMNCALMCQYIEFVADRLLGELGCEKIYN-SQNPFDFMT-IISNEGKTNFF 348

Query: 121 ETRVTEYQQGAG 132
           E +V EYQ+   
Sbjct: 349 EKKVGEYQKSGV 360


>gi|296227440|ref|XP_002759377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 1 [Callithrix jacchus]
          Length = 351

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G    F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKFFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 325 EKRVSEYQRFAVM 337


>gi|47213105|emb|CAF89525.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 198

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K   Q    ++  A  +E  + 
Sbjct: 61  MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFL 113

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    ++Y++F+A+R   ++G   +++  ENPF +M E I L+ + NFF
Sbjct: 114 TEALPVKLIGMNCQLMKRYIEFVADRLLLELGFAKIYR-AENPFDFM-ENISLEGKTNFF 171

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 172 EKRVGEYQRMGVM 184


>gi|300676950|gb|ADK26821.1| ribonucleotide reductase M2 [Zonotrichia albicollis]
          Length = 390

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A L+E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLIHKPSEERVREIIMNAVLIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 364 EKRVGEYQRMGVMS 377


>gi|219110949|ref|XP_002177226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411761|gb|EEC51689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 409

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 12/139 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + ++++        K  +     ++ EA  +E  + 
Sbjct: 266 MPGLTFSNELISRDEGLHCSFACQLYSKLER-------KLSETDMHKLIGEAVEVEKGFV 318

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P G +G+NA    QY++F+A+R  H +G   L+  ++NPF WM  +I L+ + NFF
Sbjct: 319 CDALPVGLIGMNASLMSQYVEFVADRLLHDLGYRTLY-GSKNPFDWMD-MISLEGKTNFF 376

Query: 121 ETRVTEYQQGA---GLKWD 136
           E RV EYQ+      L  D
Sbjct: 377 EKRVGEYQKSGVMASLSDD 395


>gi|171687074|ref|XP_001908478.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943498|emb|CAP69151.1| unnamed protein product [Podospora anserina S mat+]
          Length = 409

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  +Q    ++ +A  +E  + 
Sbjct: 259 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPSKQLVEDIIRDAVTIEQEFL 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G + +++ T NPF +M E I L  + NFF
Sbjct: 312 TEALPCALLGMNSNLMKQYIEFVADRLLVALGNDKIYRST-NPFDFM-ENISLGGKTNFF 369

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 370 EKRVGEYQKAGVMN 383


>gi|126322530|ref|XP_001380256.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 361

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       +L  K  +++ + ++  A  +E  + 
Sbjct: 224 MPGLTFSNELISRDEGLHCDFACLMFH-------YLVNKPSEERVKEIIINAVEIEQEFL 276

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P G +G+N+   +QY++F+A+R   ++G   +F+ ++NPF +M E I L+ + NFF
Sbjct: 277 TDALPVGLIGINSTLMKQYIEFVADRLLVELGFSKVFQ-SDNPFDFM-ENISLEGKTNFF 334

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 335 EKRVSEYQRFAVM 347


>gi|296227442|ref|XP_002759378.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 2 [Callithrix jacchus]
          Length = 299

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 162 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 214

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G    F+  ENPF +M E I L+ + NFF
Sbjct: 215 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKFFQ-AENPFDFM-ENISLEGKTNFF 272

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 273 EKRVSEYQRFAVM 285


>gi|124010268|ref|ZP_01694921.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
 gi|123983653|gb|EAY24093.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
          Length = 330

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 8/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + N           K   +   +++  A  +E  + 
Sbjct: 188 MPGLSFSNELISRDEGLHCDFACLLYNSYIK------NKLPNETVVSIIKNAVEIEKEFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++F+A+R   ++G E  +  T NPF +M E+I L+ + NFF
Sbjct: 242 TDALPVKLIGMNSDLMSEYIEFVADRLLVELGCEKQYN-TANPFDFM-EMISLEGKTNFF 299

Query: 121 ETRVTEYQQGAG 132
           E RV+EY +   
Sbjct: 300 EKRVSEYSKAGV 311


>gi|291244313|ref|XP_002742041.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 463

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 73/134 (54%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I RDE LH +F   + +       HL  K  +++ R ++ +A  +E  + 
Sbjct: 325 LPGLTFSNELISRDEGLHCDFACLIFS-------HLTYKPSKERIRNIITQAVDIEKEFW 377

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           +E +P G +G+N      Y++F+A+R   ++  + ++ + ENPF +M E I L+ + NFF
Sbjct: 378 NEALPVGLIGMNVTLMNYYVEFVADRLLLELNCDKVY-HRENPFDFM-ENISLEGKTNFF 435

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 436 EKRVGEYQKANVMS 449


>gi|50545856|ref|XP_500466.1| YALI0B03630p [Yarrowia lipolytica]
 gi|49646332|emb|CAG82692.1| YALI0B03630p [Yarrowia lipolytica]
          Length = 403

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLENRPSKKIVEDVIVEAVGIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P G +G+NA    QY++F+A+R    +G   ++  T NPF +M E I L  + NFF
Sbjct: 313 TDALPCGLLGMNAKLMCQYIEFVADRLLVALGNSKVYNST-NPFDFM-ENISLAGKTNFF 370

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 371 EKRVSDYQKAGVM 383


>gi|11878241|gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans]
          Length = 406

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNWRPSKKVVEDIIVEAVAIEKEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  F  T NPF +M E I L  + NFF
Sbjct: 310 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKEYFNAT-NPFDFM-ESISLAGKTNFF 367

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 368 EKRVGDYQKAGVM 380


>gi|73974198|ref|XP_539109.2| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 2 [Canis familiaris]
          Length = 351

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+ A +
Sbjct: 325 EKRVAEYQRFAVM 337


>gi|261189551|ref|XP_002621186.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239591422|gb|EEQ74003.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239613047|gb|EEQ90034.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis ER-3]
 gi|327356917|gb|EGE85774.1| ribonucleotide reductase M2 B [Ajellomyces dermatitidis ATCC 18188]
          Length = 413

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        +   +    ++ EA  +E  + 
Sbjct: 262 MPGLTFSNELISRDEGLHTDFACLLFSHLRH-------RPSPEAVERIITEAVTIEQEFL 314

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M   I L  + NFF
Sbjct: 315 SDALPVALLGMNAKLMCQYIEFVADRLLVALGNKKVYNST-NPFDFMD-NISLAGKTNFF 372

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 373 EKRVGDYQKAGVM 385


>gi|190896544|gb|ACE96785.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  180 bits (457), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|71043760|ref|NP_001020911.1| ribonucleoside-diphosphate reductase subunit M2 [Rattus norvegicus]
 gi|77416595|sp|Q4KLN6|RIR2_RAT RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|68533806|gb|AAH99082.1| Ribonucleotide reductase M2 [Rattus norvegicus]
 gi|149051013|gb|EDM03186.1| rCG61374 [Rattus norvegicus]
          Length = 390

 Score =  180 bits (457), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  +  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVKEIITNSVRIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +FK  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFK-VENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 364 EKRVGEYQRMGVMS 377


>gi|260950985|ref|XP_002619789.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
 gi|238847361|gb|EEQ36825.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
          Length = 419

 Score =  180 bits (457), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  Y 
Sbjct: 277 MPGLTFSNELICRDEGLHTDFACLLFS-------HLNNRPNPAIVEKIITEAVTIEKEYF 329

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G + ++  T NPF +M E I L  + NFF
Sbjct: 330 TDALPASLLGMNCDLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFF 387

Query: 121 ETRVTEYQQGAGLKW 135
           E RV++YQ+   +  
Sbjct: 388 EKRVSDYQKAGVMAQ 402


>gi|281340156|gb|EFB15740.1| hypothetical protein PANDA_011632 [Ailuropoda melanoleuca]
          Length = 336

 Score =  180 bits (457), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 199 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 252 TEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 309

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+ A +
Sbjct: 310 EKRVAEYQRFAVM 322


>gi|145537171|ref|XP_001454302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422057|emb|CAK86905.1| unnamed protein product [Paramecium tetraurelia]
          Length = 507

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K   Q+   ++  A  +E  + 
Sbjct: 370 MPGLTFSNELISRDEGLHTDFACLLYK-------HMINKLSIQRVHEIISSAVEIEKEFI 422

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G   ++  ++NPF WM  +I L+ + NFF
Sbjct: 423 SEALPVELIGMNSNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWMD-MISLQGKTNFF 480

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   + 
Sbjct: 481 ERRVGDYQKAGVMS 494


>gi|190896528|gb|ACE96777.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|158286793|ref|XP_308927.4| AGAP006818-PA [Anopheles gambiae str. PEST]
 gi|157020637|gb|EAA04227.4| AGAP006818-PA [Anopheles gambiae str. PEST]
          Length = 400

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++   ++ +A L+E  + 
Sbjct: 263 MPGLTFSNELISRDEGLHCDFACLMFK-------YLVQKPSKERVTEIIRDAVLIEQEFL 315

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G E ++ +T+NPF +M E I L+ + NFF
Sbjct: 316 TKALPVDMLGMNCDLMSQYIEFVADRLLLELGCEKIY-HTKNPFSFM-EFISLEGKTNFF 373

Query: 121 ETRVTEYQQGAGL 133
           E +V EYQ+   +
Sbjct: 374 EKKVGEYQKWGVM 386


>gi|7023557|dbj|BAA92005.1| unnamed protein product [Homo sapiens]
          Length = 351

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGVNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 325 EKRVSEYQRFAVM 337


>gi|118089007|ref|XP_419948.2| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 2 [Gallus gallus]
          Length = 384

 Score =  179 bits (456), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ + ++  A L+E  + 
Sbjct: 247 MPGLTFSNELISRDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFL 299

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 300 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFF 357

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 358 EKRVGEYQRMGVMS 371


>gi|10344|emb|CAA26307.1| unnamed protein product [Spisula solidissima]
          Length = 300

 Score =  179 bits (456), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  Q++   ++ EA  +E  + 
Sbjct: 160 MPGLTFSNELISRDEGLHCDFACLMFS-------HLVNKPSQERIHQIIDEAVKIEQVFL 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++  + L+   ENPF +M E I L+ + NFF
Sbjct: 213 TEALPCRLIGMNCDLMRQYIEFVADRLLLELKCDKLYN-KENPFDFM-EHISLEGKTNFF 270

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 271 EKRVGEYQKMGVMS 284


>gi|301117384|ref|XP_002906420.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262107769|gb|EEY65821.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 379

 Score =  179 bits (456), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 73/132 (55%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE +H +F   + +++        TK  + +   ++ +A  +E  + 
Sbjct: 242 MPGLSFSNELISRDEGMHTDFACLLYSKL-------VTKLPESRVHEIVRDAVTIEHEFV 294

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R  + +G+  ++ + +NPF WM  +I L+ + NFF
Sbjct: 295 RDSLPVELIGMNSGLMCQYIEFVADRLLYSLGVSKIY-HAKNPFDWMD-MISLQGKTNFF 352

Query: 121 ETRVTEYQQGAG 132
           E RV EY +   
Sbjct: 353 EKRVGEYSKAGV 364


>gi|190896536|gb|ACE96781.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896560|gb|ACE96793.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896566|gb|ACE96796.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|190896524|gb|ACE96775.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896534|gb|ACE96780.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|167519412|ref|XP_001744046.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778008|gb|EDQ91624.1| predicted protein [Monosiga brevicollis MX1]
          Length = 329

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        +  +++   ++ +A  +E  + 
Sbjct: 192 MPGLTFSNELISRDEGLHTDFACLMFSMLKK-------RPSKERVTGIIMDAVEIEQDFL 244

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P G +G+NA   +QY++F+++R    +G E +F  +ENPF +M E I ++ + NFF
Sbjct: 245 TNALPCGLLGMNATLMKQYIEFVSDRLLVALGCEKIFN-SENPFDFM-ESISIEGKTNFF 302

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EYQ+   +  
Sbjct: 303 EKRVGEYQKAGVMAD 317


>gi|169779219|ref|XP_001824074.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           oryzae RIB40]
 gi|238499845|ref|XP_002381157.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
 gi|83772813|dbj|BAE62941.1| unnamed protein product [Aspergillus oryzae]
 gi|220692910|gb|EED49256.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
          Length = 405

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +   Q    ++ EA  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNNRPDPQIVEDVIVEAVSIEKEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G    F  T NPF +M   I L  + NFF
Sbjct: 310 TDALPCALLGMNSNLMCQYIEFVADRLLVALGNNKYFNAT-NPFDFMD-NISLAGKTNFF 367

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 368 EKRVGDYQKAGVM 380


>gi|315041979|ref|XP_003170366.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
 gi|311345400|gb|EFR04603.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
          Length = 408

 Score =  179 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNHRPEPSAVEAIITEAVTIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 313 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFF 370

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 371 EKRVGDYQKAGVM 383


>gi|254572986|ref|XP_002493602.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|238033401|emb|CAY71423.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|328354568|emb|CCA40965.1| ribonucleoside-diphosphate reductase subunit M2 [Pichia pastoris
           CBS 7435]
          Length = 400

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +  ++    ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLFS-------HLNNRASEEIVEKIITEAVEIEKRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G + ++    NPF +M E I L  + NFF
Sbjct: 312 TDALPVSLLGMNCSLMCQYVEFVADRLLVALGNKKVYNVN-NPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 370 EKRVSDYQKAGVM 382


>gi|20178418|ref|NP_619839.1| CPXV051 protein [Cowpox virus]
 gi|20153036|gb|AAM13497.1|AF482758_48 CPXV051 protein [Cowpox virus]
          Length = 333

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 250 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 307

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 308 EKRVGEYQKMGVMSQE 323


>gi|266919|sp|P29883|RIR2_VACCP RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335710|gb|AAA48294.1| F14 [Vaccinia virus]
          Length = 319

 Score =  179 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EYQ+   +  
Sbjct: 294 EKRVGEYQKMGVMSQ 308


>gi|56713400|gb|AAW23440.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|56713684|gb|AAW23722.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|88854075|gb|ABD52493.1| ribonucleoside-diphosphate reductase subunit [Vaccinia virus]
 gi|167412519|gb|ABZ79953.1| ribonucleotide reductase small subunit [Vaccinia virus GLV-1h68]
          Length = 319

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EYQ+   +  
Sbjct: 294 EKRVGEYQKMGVMSQ 308


>gi|261335316|emb|CBH18310.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         ++  K  + +   ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  ++NPF +M  +I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFF 309

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 310 EKKVGEYQKAGVMS 323


>gi|56404698|sp|O57175|RIR2_VACCA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2772676|gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus]
 gi|47088360|gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|160857924|emb|CAM58212.1| ribonucleotide reductase small subunit [Vaccinia virus Ankara]
          Length = 319

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|66275840|ref|YP_232925.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|132629|sp|P11158|RIR2_VACCV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335624|gb|AAA48244.1| F4L protein [Vaccinia virus]
 gi|335809|gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit [Vaccinia
           virus]
 gi|29692149|gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus WR]
          Length = 319

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|90660281|gb|ABD97395.1| ribonucleotide reductase small subunit [Cowpox virus]
          Length = 333

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 250 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 307

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 308 EKRVGEYQKMGVMSQE 323


>gi|157869457|ref|XP_001683280.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|68224164|emb|CAJ04657.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 392

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N       H+  K  +++   ++ +A  +E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T+ PF +M E+I L+ + NFF
Sbjct: 307 CDALPVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYHSTQ-PFEFM-EMISLQGKTNFF 364

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 365 ERKVGEYQKAGVMS 378


>gi|2465173|emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei]
          Length = 337

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         ++  K  + +   ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  ++NPF +M  +I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFF 309

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 310 EKKVGEYQKAGVMS 323


>gi|284043177|ref|YP_003393517.1| ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
 gi|283947398|gb|ADB50142.1| Ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
          Length = 364

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 57/133 (42%), Positives = 87/133 (65%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + GI   ++Y +RDES H+     ++ ++  ENP +WT EF+ + R ++ EA  LE  + 
Sbjct: 224 LPGIGTMFRYTLRDESNHIELFRRLLRELVAENPEIWTAEFRDELRELMREAVALEQRFI 283

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VGLNA    QY+ +IA+RR   +GLEPL    ENP PW++E++D++KE+NFF
Sbjct: 284 DDCLPVEGVGLNADEFAQYIDYIADRRLEGVGLEPLKPGVENPLPWLAELMDVRKEQNFF 343

Query: 121 ETRVTEYQQGAGL 133
           E RVTEYQ+ + L
Sbjct: 344 EGRVTEYQKASAL 356


>gi|38229183|ref|NP_938276.1| 20L [Yaba monkey tumor virus]
 gi|38000454|gb|AAR07377.1| 20L [Yaba monkey tumor virus]
          Length = 325

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     +   R ++ EA  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACMMFK-------HLSNPPLENVIRDIVIEAVDIEKNFL 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E MP   +G+N    +QY++F+A+R   ++G +  +  ++NPF +M E I L+ + NFF
Sbjct: 241 TEAMPVKLIGMNCDLMKQYIEFVADRLLLELGCKK-YYCSKNPFDFM-ENISLEGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+ + + 
Sbjct: 299 EKRVSEYQKMSVMS 312


>gi|224048725|ref|XP_002196356.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Taeniopygia
           guttata]
          Length = 390

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ + ++  A L+E  + 
Sbjct: 253 MPGLTFSNELISRDEGLHCDFACLMFK-------HLIHKPSEERVKEIIMNAVLIEQEFL 305

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIYK-AENPFDFM-ENISLEGKTNFF 363

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 364 EKRVGEYQRMGVMS 377


>gi|294945135|ref|XP_002784568.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239897674|gb|EER16364.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 238

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 8/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N +       +T+   ++   ++  A  +E  + 
Sbjct: 84  MPGLTFSNELISRDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFI 137

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    +Y++F+A+R    +G   L+  T NPF WM  +I L+ + NFF
Sbjct: 138 SESLPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWMK-MISLQGKTNFF 195

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+G  +
Sbjct: 196 EKRVGEYQKGGVM 208


>gi|256421019|ref|YP_003121672.1| ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
 gi|256035927|gb|ACU59471.1| Ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
          Length = 323

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F   +   ++   P        ++  T++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGLHCEFACLLYGMLENRLPE-------EQVHTIIRDAVAIEKEFI 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++F+A+R   ++G   +F  T NPF +M E+I L+ + NFF
Sbjct: 239 TDALPVALIGMNSKLMSEYIEFVADRWLSELGYTKIFN-TANPFDFM-EMISLQGKTNFF 296

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   + 
Sbjct: 297 EKRVGDYQKAGVMS 310


>gi|145553335|ref|XP_001462342.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430181|emb|CAK94969.1| unnamed protein product [Paramecium tetraurelia]
          Length = 355

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K   Q+   ++  A  +E  + 
Sbjct: 218 MPGLTFSNELISRDEGLHTDFACLLYK-------HLVNKMSNQRIHEIISSAVEIEKEFI 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G   ++  ++NPF WM  +I L+ + NFF
Sbjct: 271 SEALPVELIGMNSNLMKQYIEFVADRLIFALGAPKIYN-SKNPFEWMD-MISLQGKTNFF 328

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   + 
Sbjct: 329 ERRVGDYQKAGVMS 342


>gi|3914640|sp|O15910|RIR2_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2411479|gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei]
 gi|261335314|emb|CBH18308.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         ++  K  + +   ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  ++NPF +M  +I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFF 309

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 310 EKKVGEYQKAGVMS 323


>gi|190896570|gb|ACE96798.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896582|gb|ACE96804.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEEQVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNAA-NPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|326472581|gb|EGD96590.1| ribonucleotide reductase small subunit RnrA [Trichophyton tonsurans
           CBS 112818]
          Length = 408

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNYRPDPNAVEAIITEAVTIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 313 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFF 370

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 371 EKRVGDYQKAGVM 383


>gi|294950175|ref|XP_002786498.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239900790|gb|EER18294.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 8/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N +K      +T+   ++   ++  A  +E  + 
Sbjct: 196 MPGLTFSNELISRDEGLHADFACLLYNMLK------YTRLPDERVHEIVRGAVEVERVFI 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    +Y++F+A+R    +G   L+  T NPF WM  +I L+ + NFF
Sbjct: 250 SESLPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWMK-MISLQGKTNFF 307

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+G  +
Sbjct: 308 EKRVGEYQKGGVM 320


>gi|255079598|ref|XP_002503379.1| predicted protein [Micromonas sp. RCC299]
 gi|226518645|gb|ACO64637.1| predicted protein [Micromonas sp. RCC299]
          Length = 335

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + I         K  +   R ++ EA  +E  + 
Sbjct: 196 MPGLTFSNELISRDEGLHRDFACLLYSYINK-------KPNESVVRQIVKEAVEIEKEFV 248

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+NA    +Y++F+A+    Q+G+   +    NPF WM E+I L+ + NFF
Sbjct: 249 CDALPCALVGMNADLMSEYIEFVADHLLGQLGMSKEYNAA-NPFDWM-ELISLQGKTNFF 306

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 307 EKRVGEYQKSGVMN 320


>gi|149248382|ref|XP_001528578.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146448532|gb|EDK42920.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 422

 Score =  179 bits (454), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +   +    ++ EA  +E  + 
Sbjct: 282 MPGLTFSNELICRDEGLHTDFACLLFS-------HLENRPDPKIVEKIISEAVEIEKEFF 334

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G E ++K T NPF +M E I L  + NFF
Sbjct: 335 TDALPVSLLGMNCKLMCQYVEFVADRLLVALGNEKIYKVT-NPFDFM-ENISLAGKTNFF 392

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 393 EKRVSDYQKAGVM 405


>gi|156386903|ref|XP_001634150.1| predicted protein [Nematostella vectensis]
 gi|156221230|gb|EDO42087.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  ++  R ++ +A ++E  + 
Sbjct: 247 MPGLTFSNELISRDEGLHCDFACLMYK-------YLVNKPDEETVRGIIKDAVVIEQEFL 299

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++F+A+R    +  + ++   ENPF +M E I L+ + NF+
Sbjct: 300 TSALPVKLIGMNCALMRQYIEFVADRLLVALNCQKVYN-VENPFDFM-ENISLEGKTNFY 357

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 358 EKRVGEYQKSGVMS 371


>gi|190896572|gb|ACE96799.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896574|gb|ACE96800.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896576|gb|ACE96801.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896578|gb|ACE96802.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEEQVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|22164633|ref|NP_671546.1| EVM028 [Ectromelia virus]
 gi|22123774|gb|AAM92332.1|AF523264_28 EVM028 [Ectromelia virus]
          Length = 319

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++FIA+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFIADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|74025550|ref|XP_829341.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834727|gb|EAN80229.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|261335315|emb|CBH18309.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         ++  K  + +   ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  ++NPF +M  +I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFF 309

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 310 EKKVGEYQKAGVMS 323


>gi|302497417|ref|XP_003010709.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
 gi|291174252|gb|EFE30069.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
          Length = 408

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 313 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFF 370

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 371 EKRVGDYQKAGVM 383


>gi|168031987|ref|XP_001768501.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680214|gb|EDQ66652.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 331

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +         K  +++   ++ EA  +E  + 
Sbjct: 189 MPGLTFSNELISRDEGLHCDFACLLYTLLI-------NKLSEERVYEIVCEAVEIEREFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    VG+N     +Y+ F+A+R    +G    +    NPF WM E+I L+ + NFF
Sbjct: 242 CEALSCDLVGMNKILMSEYIDFVADRLLVSLGYRKKYNAL-NPFDWM-ELISLQGKTNFF 299

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 300 EKRVGEYQKASVMS 313


>gi|296809816|ref|XP_002845246.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
 gi|238842634|gb|EEQ32296.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
          Length = 405

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNYRPDPTAVEAIITEAVSIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 310 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFF 367

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 368 EKRVGDYQKAGVM 380


>gi|74025554|ref|XP_829343.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834729|gb|EAN80231.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         ++  K  + +   ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  ++NPF +M  +I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFF 309

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 310 EKKVGEYQKAGVMS 323


>gi|71648907|ref|XP_813233.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70878098|gb|EAN91382.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         ++  K  +++ R ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLY------ENYIVNKLPKERIREIICSAVDIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFF
Sbjct: 252 CDAIPVRLLGMNADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFF 309

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 310 EKKVGEYQKAGVMS 323


>gi|327298815|ref|XP_003234101.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
 gi|326464279|gb|EGD89732.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
          Length = 408

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNYRPDPSAVEAIITEAVTIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M   I L  + NFF
Sbjct: 313 TDALPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYN-TTNPFDFMD-NISLAGKTNFF 370

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 371 EKRVGDYQKAGVM 383


>gi|190896568|gb|ACE96797.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896580|gb|ACE96803.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEEQVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF WM E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNAA-NPFDWM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|44971395|gb|AAS49745.1| RPXV032 [Rabbitpox virus]
          Length = 319

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EYQ+   +  
Sbjct: 294 EKRVGEYQKMGVMSQ 308


>gi|111184227|gb|ABH08147.1| HSPV044 [Horsepox virus]
          Length = 319

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|302904131|ref|XP_003049009.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729943|gb|EEU43296.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 389

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        +  +Q  + ++ +A  +E  + 
Sbjct: 240 MPGLTFSNELISRDEGLHTDFACLLHSHLKG-------RASKQVIQDIITDAVTIEQEFL 292

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA   +QY++F+A+R    +G E ++K   NPF +M E I L  + NFF
Sbjct: 293 TEALPCALLGMNADLMKQYIEFVADRLLVALGNEKVYKSA-NPFDFM-ENISLGGKTNFF 350

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   L
Sbjct: 351 EKRVGDYQKAGVL 363


>gi|170032272|ref|XP_001844006.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
 gi|167872122|gb|EDS35505.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
          Length = 391

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++   ++ EA ++E  + 
Sbjct: 254 MPGLTFSNELISRDEGLHTDFACLMFR-------YLVQKPSKERVLEIIREAVVIEQEFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G E ++  T+NPF +M E I L+ + NFF
Sbjct: 307 TKALPVDLLGMNCELMSQYIEFVADRLLLELGNEKIYN-TKNPFSFM-EFISLEGKTNFF 364

Query: 121 ETRVTEYQQGAGL 133
           E +V EYQ+   +
Sbjct: 365 EKKVGEYQKWGVM 377


>gi|20809684|gb|AAH28932.1| Similar to ribonucleotide reductase protein r2 class I [Homo
           sapiens]
          Length = 172

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 35  MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 87

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 88  TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 145

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 146 EKRVGEYQRMGVMS 159


>gi|325953830|ref|YP_004237490.1| ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
 gi|323436448|gb|ADX66912.1| Ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
          Length = 323

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 8/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  ++  + ++ +A  +E  + 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLLYVN------HLKNKLPEETVQKIIADAVEVEKEFV 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M E+I L+ + NFF
Sbjct: 238 TEALPVRLIGMNAELMCQYIEFVADRLLDALGCKKVWNAT-NPFDFM-ELISLQGKTNFF 295

Query: 121 ETRVTEYQQGAG 132
           E RV EYQ+   
Sbjct: 296 ERRVGEYQKSGV 307


>gi|255037048|ref|YP_003087669.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
 gi|254949804|gb|ACT94504.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
          Length = 331

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH  F   +  +      H+  +  Q++   ++ +A  +E  + 
Sbjct: 189 MPGLSFSNELISRDEGLHCEFACLLYTK------HILNQLPQERVIEIMLDAVEIEKEFV 242

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA   +QY+++IA+    ++G    F  + NPF +M E+I L  + NFF
Sbjct: 243 SEALPVSLIGMNADLMKQYIEYIADFWLERLGCPKQF-GSANPFDFM-ELISLPGKTNFF 300

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 301 EKRVGEYQKAGVMS 314


>gi|194474072|ref|NP_001124015.1| ribonucleoside-diphosphate reductase subunit M2 B [Rattus
           norvegicus]
 gi|149066498|gb|EDM16371.1| ribonucleotide reductase M2 B (TP53 inducible) (predicted) [Rattus
           norvegicus]
          Length = 351

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++   ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVMEIIVDAVKIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQ-AENPFDFM-ENISLEGKTNFF 324

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 325 EKRVSEYQRFAVM 337


>gi|132628|sp|P20493|RIR2_VACCC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335366|gb|AAA48018.1| putative F4L [Vaccinia virus Copenhagen]
          Length = 319

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|12085003|ref|NP_073405.1| 20L protein [Yaba-like disease virus]
 gi|56404692|sp|Q9DHU2|RIR2_YLDV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|12056179|emb|CAC21258.1| 20L protein [Yaba-like disease virus]
          Length = 325

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL         R ++ EA  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACIMFK-------HLLNPPLNSVVRDIIIEAVNIEKNFL 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G +  +  ++NPF +M E I L+ + NFF
Sbjct: 241 TEAIPVKLIGMNCDLMKQYIEFVADRLLLELGCDK-YYCSKNPFDFM-ENISLEGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+ + + 
Sbjct: 299 EKRVSEYQKMSVMS 312


>gi|113195221|ref|YP_717351.1| ribonucleotide reductase small subunit [Taterapox virus]
 gi|90660497|gb|ABD97610.1| ribonucleotide reductase small subunit [Taterapox virus]
          Length = 319

 Score =  178 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|168015485|ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688661|gb|EDQ75037.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 330

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +         K  + +   ++ EA ++E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACLLYTLL-------NNKLSEDRVYEIVCEAVVIEQEFV 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    VG+N     +Y+ F+A+R    +G    +  + NPF WM E+I L+ + NFF
Sbjct: 241 CEALSCDLVGMNKTLMSEYIDFVADRLLVSLGYPKKYN-SHNPFDWM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 299 EKRVGEYQKASVMS 312


>gi|1808636|emb|CAA64118.1| G4L protein [Cowpox virus]
          Length = 319

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  ++++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVKSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|145580571|pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
           Subunit R2
          Length = 332

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 195 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 247

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 248 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 305

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 306 EKRVGEYQRMGVMS 319


>gi|157126966|ref|XP_001654749.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
 gi|15638625|gb|AAL05057.1|AF411297_1 ribonucleotide reductase 2 [Aedes aegypti]
 gi|82469974|gb|ABB77235.1| ribonucleotide reductase small subunit R2 [Aedes aegypti]
 gi|108873070|gb|EAT37295.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
          Length = 397

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  Q++   ++ EA L+E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFL 312

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G++ ++  T+NPF +M E I L+ + NFF
Sbjct: 313 TKALPVDLLGMNCDLMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFF 370

Query: 121 ETRVTEYQQGAGL 133
           E +V EYQ+   +
Sbjct: 371 EKKVGEYQKWGVM 383


>gi|168049349|ref|XP_001777126.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671569|gb|EDQ58119.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 325

 Score =  178 bits (452), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +         K  + +   ++ EA  +E  + 
Sbjct: 185 MPGLTFSNELISRDEGLHCDFACLLYTLL-------NNKLSEDRVHEIVCEAVDIEREFV 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    VG+N     +Y+ F+A+R    +G    +    NPF WM E+I L+ + NFF
Sbjct: 238 CEALSCDLVGMNKIMMSEYIDFVADRLLVSLGYNKRYN-ARNPFDWM-ELISLQGKTNFF 295

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+ + + 
Sbjct: 296 EKRVGEYQKASVMS 309


>gi|885759|gb|AAA69374.1| E4L [Variola virus]
 gi|5830589|emb|CAB54628.1| E4L protein [Variola minor virus]
 gi|94483674|gb|ABF22791.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484287|gb|ABF23401.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485692|gb|ABF24799.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486095|gb|ABF25200.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486298|gb|ABF25402.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486501|gb|ABF25604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486703|gb|ABF25805.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486906|gb|ABF26007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487312|gb|ABF26411.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487921|gb|ABF27017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489931|gb|ABF29017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724476|gb|ABG43600.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635085|gb|ABU91534.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|18079279|ref|NP_525111.1| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|12644287|sp|P48592|RIR2_DROME RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10727628|gb|AAF58599.2| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|15292183|gb|AAK93360.1| LD41588p [Drosophila melanogaster]
 gi|220946286|gb|ACL85686.1| CG8975-PA [synthetic construct]
 gi|220955972|gb|ACL90529.1| RnrS-PA [synthetic construct]
          Length = 393

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 367 EKKVGEYQRMGVVS 380


>gi|255954081|ref|XP_002567793.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589504|emb|CAP95650.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 400

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       H+  +   +    ++ EA  +E  + 
Sbjct: 252 MPGLTFSNELISRDEGLHTDFACLLFS-------HMNHRPDPKVVEEIIVEAVGIEQEFL 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +    NPF +M E I L  + NFF
Sbjct: 305 TDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKYYNSA-NPFDFM-ESISLAGKTNFF 362

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 363 EKRVGDYQKAGVM 375


>gi|74025552|ref|XP_829342.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834728|gb|EAN80230.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         ++  K  + +   ++  A L+E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVLIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  ++NPF +M  +I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYN-SKNPFDFMD-MISLQGKTNFF 309

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 310 EKKVGEYQKAGVMS 323


>gi|241951066|ref|XP_002418255.1| ribonucleoside-diphosphate reductase small chain 1, putative;
           ribonucleotide reductase r2 subunit 1, putative;
           ribonucleotide reductase small subunit 1, putative
           [Candida dubliniensis CD36]
 gi|223641594|emb|CAX43555.1| ribonucleoside-diphosphate reductase small chain 1, putative
           [Candida dubliniensis CD36]
          Length = 413

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  +   +    ++ EA  +E  Y 
Sbjct: 273 MPGLTFSNELICRDEGLHTDFACLLF-------AHLQNRPSPEIVEKIITEAVDVEKEYF 325

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G + ++  T NPF +M E I L  + NFF
Sbjct: 326 TDALPVSLLGMNCNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFF 383

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 384 EKRVSDYQKAGVM 396


>gi|885717|gb|AAA69333.1| C8L [Variola virus]
 gi|885826|gb|AAA69439.1| C8L [Variola virus]
 gi|94483878|gb|ABF22994.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484081|gb|ABF23196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485084|gb|ABF24194.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485286|gb|ABF24395.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485489|gb|ABF24597.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485894|gb|ABF25000.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487109|gb|ABF26209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487515|gb|ABF26613.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487716|gb|ABF26813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488123|gb|ABF27218.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488323|gb|ABF27417.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488523|gb|ABF27616.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488724|gb|ABF27816.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488925|gb|ABF28016.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489125|gb|ABF28215.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489324|gb|ABF28413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489527|gb|ABF28615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489726|gb|ABF28813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94490135|gb|ABF29220.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724070|gb|ABG43196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724681|gb|ABG43804.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724885|gb|ABG44007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725088|gb|ABG44209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725293|gb|ABG44413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725496|gb|ABG44615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725700|gb|ABG44818.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725903|gb|ABG45020.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726107|gb|ABG45223.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726310|gb|ABG45425.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726513|gb|ABG45627.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635013|gb|ABU91466.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635031|gb|ABU91483.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635049|gb|ABU91500.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635067|gb|ABU91517.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635103|gb|ABU91551.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635121|gb|ABU91568.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635139|gb|ABU91585.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635158|gb|ABU91603.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635176|gb|ABU91620.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635194|gb|ABU91637.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635212|gb|ABU91654.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635230|gb|ABU91671.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635248|gb|ABU91688.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635266|gb|ABU91705.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635284|gb|ABU91722.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635320|gb|ABU91756.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635338|gb|ABU91773.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635356|gb|ABU91790.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635374|gb|ABU91807.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635392|gb|ABU91824.1| ribonucleotide reductase small subunit [Variola virus]
 gi|157739431|gb|ABU91739.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|438946|gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small
           chain); putative [Variola major virus]
 gi|94484491|gb|ABF23604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484688|gb|ABF23800.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484886|gb|ABF23997.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724274|gb|ABG43399.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 333

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 250 TVALPVKLIGMNCEMMKTYIKFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 307

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 308 EKRVGEYQKMGVMSQE 323


>gi|302833193|ref|XP_002948160.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
 gi|300266380|gb|EFJ50567.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
          Length = 354

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++     I RDE LH +F   +         HL  +  +++   ++ EA  LE  + 
Sbjct: 207 MPGLSFSNCLISRDEGLHCDFACCLY-------GHLKNRLSRERVVKIVDEAVRLEDEFC 259

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+NA    QY++F+A+R    +G +  +    NPF WM E+I L+ + NFF
Sbjct: 260 TEALSCELLGMNADLMRQYIRFVADRLLVSLGYDKYYNTV-NPFDWM-EMISLQGKANFF 317

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  D
Sbjct: 318 ERRVGEYQRACVMAGD 333


>gi|227541|prf||1706181A ribonucleotide reductase
          Length = 290

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 153 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 205

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 206 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 263

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 264 EKRVGEYQRMGVMS 277


>gi|146418573|ref|XP_001485252.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146390725|gb|EDK38883.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 418

 Score =  177 bits (451), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + +       HL  +   +    ++ EA  +E  + 
Sbjct: 274 MPGLSFSNELICRDEGLHTDFACLLFS-------HLQNRPDPEIVEKIITEAVDIEKEFF 326

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G + ++    NPF +M E I L  + NFF
Sbjct: 327 TDALPISLLGMNCKLMCQYVEFVADRLLVALGNKKIYNVA-NPFDFM-ENISLAGKTNFF 384

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 385 EKRVSDYQKAGVM 397


>gi|45184688|ref|NP_982406.1| AAL136Cp [Ashbya gossypii ATCC 10895]
 gi|44980034|gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895]
          Length = 422

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K   +    ++ EA  +E  Y 
Sbjct: 280 MPGLTFSNELICRDEGLHTDFACLLF-------AHLNNKPDTEIVEKIITEAVEIEKRYF 332

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  +  + NPF +M E I L  + NFF
Sbjct: 333 QDAIPVALLGMNSSLMNQYVEFVADRLLVALGNKKYYNVS-NPFDFM-ENISLAGKTNFF 390

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 391 EKRVSDYQKAGVM 403


>gi|37551487|gb|AAQ93139.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|38348909|gb|AAR17885.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|88900660|gb|ABD57572.1| VACV040 [Vaccinia virus]
 gi|90819703|gb|ABD98513.1| VACV-DUKE-051 [Vaccinia virus]
          Length = 319

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R ++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRYIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EYQ+   +  
Sbjct: 294 EKRVGEYQKMGVMSQ 308


>gi|326916502|ref|XP_003204546.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Meleagris gallopavo]
          Length = 339

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ + ++  A L+E  + 
Sbjct: 202 MPGLTFSNELISRDEGLHCDFACLMFK-------HLIRKPSEERVKEIIMNAVLIEQEFL 254

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   ++K  ENPF +M E I L+ + NFF
Sbjct: 255 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFRKIYK-VENPFDFM-ENISLEGKTNFF 312

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 313 EKRVGEYQRMGVMS 326


>gi|313213932|emb|CBY40745.1| unnamed protein product [Oikopleura dioica]
          Length = 418

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K  Q++   ++ +A  +E  + 
Sbjct: 275 MPGVTFSNELISRDEGLHTDFACLMYK-------HMVQKPSQEQIIAIIRDAVSIEQEFL 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    + Y++F+A+R   ++    ++K  ENPF +M E+I L+ + NFF
Sbjct: 328 TDALPVRLIGMNCDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFF 385

Query: 121 ETRVTEYQQGAGL 133
           E +V+EY +   +
Sbjct: 386 EKKVSEYARAGVM 398


>gi|156058956|ref|XP_001595401.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980]
 gi|154701277|gb|EDO01016.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 407

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        +  +Q  + ++ EA  +E  + 
Sbjct: 254 MAGLTFSNELISRDEGLHTDFACLLFSHLKH-------RPSKQAVQDVITEAVEIEQEFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G + ++K   NPF +M E I L  + NFF
Sbjct: 307 TEALPCALLGMNSTLMKQYIEFVADRLLVTLGNDKVYKSA-NPFDFM-ENISLAGKTNFF 364

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 365 EKRVGDYQKAGVM 377


>gi|195485577|ref|XP_002091148.1| GE13485 [Drosophila yakuba]
 gi|194177249|gb|EDW90860.1| GE13485 [Drosophila yakuba]
          Length = 393

 Score =  177 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 367 EKKVGEYQRMGVVS 380


>gi|294890631|ref|XP_002773236.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239878288|gb|EER05052.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 8/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N +       +T+   ++   ++  A  +E  + 
Sbjct: 196 MPGLTFSNELISRDEGLHADFACLLYNMMH------YTRLPDERVHEIVRGAVDVERVFI 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    +Y++F+A+R    +G   L+  T NPF WM  +I L+ + NFF
Sbjct: 250 SESLPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLYNAT-NPFDWMK-MISLQGKTNFF 307

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+G  +
Sbjct: 308 EKRVGEYQKGGVM 320


>gi|157939640|ref|YP_001497012.1| ribonucleotide reductase [Tanapox virus]
 gi|146746356|gb|ABQ43492.1| ribonucleotide reductase [Tanapox virus]
 gi|146746512|gb|ABQ43647.1| ribonucleotide reductase [Tanapox virus]
          Length = 325

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL         R ++ EA  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHCDFACIMFK-------HLLNPPLNSVVRDIIIEAVNIEKNFL 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G    +  ++NPF +M E I L+ + NFF
Sbjct: 241 TEAIPVKLIGMNCDLMKQYIEFVADRLLLELGCNK-YYCSKNPFDFM-ENISLEGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+ + + 
Sbjct: 299 EKRVSEYQKMSVMS 312


>gi|193784694|dbj|BAG53847.1| unnamed protein product [Homo sapiens]
 gi|193787382|dbj|BAG52588.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score =  177 bits (450), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +++ R ++  A  +E  + 
Sbjct: 160 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEERVREIIINAVRIEQEFL 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 213 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 270

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 271 EKRVGEYQRMGVMS 284


>gi|322795965|gb|EFZ18591.1| hypothetical protein SINV_11129 [Solenopsis invicta]
          Length = 426

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I         K   +  ++++ +A  +E  + 
Sbjct: 284 MPGLTFSNELISRDEGLHCDFACLIFKHIIQ-------KPSFEHVKSIIMDAVEIEKEFL 336

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N      Y++F+A+R    +G E ++  +ENPF +M+  I L+ + NFF
Sbjct: 337 TQALPVELIGMNCSLMCNYIEFVADRLFVALGFEKVYN-SENPFSFMN-FISLEGKTNFF 394

Query: 121 ETRVTEYQQGAGLK 134
           E +V EY++   ++
Sbjct: 395 EKKVGEYKKFGVVE 408


>gi|328771482|gb|EGF81522.1| hypothetical protein BATDEDRAFT_16297 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 336

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +         K      + ++HEA  +E  ++
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLFTLL-------NNKPTDSVIQQIIHEAVTIEQEFS 250

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA   +QY++F+A+R   ++G+   +    NPF +M  +I L+ + NFF
Sbjct: 251 TESLPVALIGMNANLMKQYIEFVADRLFIELGMPKKY-GVGNPFDFMD-MISLQGKTNFF 308

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 309 EKRVGEYQKSGVMN 322


>gi|322817571|gb|EFZ25271.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         ++  K   ++ R ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLY------ENYIVNKLPTERIREIICSAVDIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+NA     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFF
Sbjct: 252 CDSIPVRLLGMNADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFF 309

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 310 EKKVGEYQKAGVMS 323


>gi|195333568|ref|XP_002033462.1| GM20395 [Drosophila sechellia]
 gi|195582581|ref|XP_002081105.1| GD25870 [Drosophila simulans]
 gi|194125432|gb|EDW47475.1| GM20395 [Drosophila sechellia]
 gi|194193114|gb|EDX06690.1| GD25870 [Drosophila simulans]
          Length = 393

 Score =  177 bits (449), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 367 EKKVAEYQRMGVVS 380


>gi|68481406|ref|XP_715342.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|68481537|ref|XP_715277.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436893|gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436961|gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|238882096|gb|EEQ45734.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 413

 Score =  177 bits (449), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  +   +    ++ EA  +E  Y 
Sbjct: 273 MPGLTFSNELICRDEGLHTDFACLLF-------AHLQNRPSPEIVERIITEAVDVEKEYF 325

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G + ++  T NPF +M E I L  + NFF
Sbjct: 326 TDALPVSLLGMNCNLMCQYIEFVADRLLLALGNKKVYNVT-NPFDFM-ENISLAGKTNFF 383

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 384 EKRVSDYQKAGVM 396


>gi|224100309|ref|XP_002311826.1| predicted protein [Populus trichocarpa]
 gi|222851646|gb|EEE89193.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ +          QK   ++ EA  +E  + 
Sbjct: 201 MPGLTFSNELISRDEGLHCDFACLLYSLLQRQLHW-------QKVYHIVGEAVEIETKFV 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA     Y++F+A+R    +G +  +   ENPF WM E I L+ + NFF
Sbjct: 254 CEALPCALIGMNATLMGDYIKFVADRLLVALGYQKKYN-VENPFDWM-EFISLQGKANFF 311

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 312 ERRVGDYQKASVMS 325


>gi|50311465|ref|XP_455757.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644893|emb|CAG98465.1| KLLA0F15103p [Kluyveromyces lactis]
          Length = 401

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K   +    ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPNPEIVEKIITEAVEIEKRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  F  T NPF +M E I L  + NFF
Sbjct: 312 MDALPVSLLGMNADLMNQYVEFVADRLLVALGNKKYFNVT-NPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 370 EKRVSDYQKAGVI 382


>gi|324519017|gb|ADY47264.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 376

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        K  +++   ++ EA  +E  Y 
Sbjct: 239 MPGLTHSNELISRDEGLHRDFACLMFSHLKK-------KPNKERIYEIIREAVKIEQEYL 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N     QY++++A+    ++    L+   ENPF +M+  I ++ + NFF
Sbjct: 292 TEALPVGLIGMNCELMSQYIEYVADHLLTELKCPKLYNM-ENPFDFMAR-ISIEAKTNFF 349

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV+EYQ+   L  D
Sbjct: 350 EKRVSEYQKAGVLSTD 365


>gi|38232564|gb|AAR15079.1| ribonucleotide reductase R2 subunit variant [Aedes albopictus]
          Length = 219

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  Q++   ++ EA L+E  + 
Sbjct: 82  MPGLTFSNELISRDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFL 134

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G++ ++  T+NPF +M E I L+ + NFF
Sbjct: 135 TKALPVDLLGMNCELMSQYIEFVADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFF 192

Query: 121 ETRVTEYQQGAGL 133
           E +V EYQ+   +
Sbjct: 193 EKKVGEYQKWGVM 205


>gi|302783485|ref|XP_002973515.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
 gi|302787555|ref|XP_002975547.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300156548|gb|EFJ23176.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300158553|gb|EFJ25175.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
          Length = 347

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + + ++          ++ + ++ +A  +E  + 
Sbjct: 205 MPGLTFSNELISRDEGLHCDFACLLYSLLNVKLDE-------KRVKEIVSDAVEIERQFV 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    VG+NA    QY+ F+A+R    +G   LF    NPF WM  +I L+ + NFF
Sbjct: 258 CEALSCDLVGMNARLMSQYIDFVADRLMVVLGYNKLFNAI-NPFDWMD-LISLQGKTNFF 315

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+ + +
Sbjct: 316 EKRVGEYQKASVM 328


>gi|313235850|emb|CBY19835.1| unnamed protein product [Oikopleura dioica]
          Length = 382

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K  Q++   ++ +A  +E  + 
Sbjct: 239 MPGVTFSNELISRDEGLHTDFACLMYK-------HMVQKPSQEQIIAIIRDAVSIEQEFL 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    + Y++F+A+R   ++    ++K  ENPF +M E+I L+ + NFF
Sbjct: 292 TDALPVRLIGMNCDLMKTYIEFVADRLLVELDCPKIYK-VENPFDFM-EMISLEGKTNFF 349

Query: 121 ETRVTEYQQGAGL 133
           E +V+EY +   +
Sbjct: 350 EKKVSEYARAGVM 362


>gi|71416121|ref|XP_810103.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70874586|gb|EAN88252.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         ++  K   ++ R ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLY------ENYIVNKLPTERIREIICSAVDIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+NA     Y++F+A+R    +G E  +  ++NPF +M E+I L+ + NFF
Sbjct: 252 CDSIPVRLLGMNADLMSTYIEFVADRLLVALGNERHYN-SKNPFDFM-EMISLQGKTNFF 309

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 310 EKKVGEYQKAGVMS 323


>gi|164659270|ref|XP_001730759.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
 gi|159104657|gb|EDP43545.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
          Length = 397

 Score =  176 bits (448), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + + +K        +        ++ EA  +E  + 
Sbjct: 254 MPGLSFSNELISRDEGLHTDFACLLFSHLKK-------RAHPDTVNRIITEAVDIEQDFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G    +  T NPF +M E I L+ + NFF
Sbjct: 307 TDALPVSLIGMNARLMCQYIEFVADRLLVALGNPKHYNST-NPFDFM-ENISLQGKSNFF 364

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV +Y +    + D
Sbjct: 365 ERRVGDYAKAGVARAD 380


>gi|302696699|ref|XP_003038028.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
 gi|300111725|gb|EFJ03126.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
          Length = 377

 Score =  176 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H  F   + + ++        +      + ++ EA  +E  + 
Sbjct: 245 MPGLTFSNELISRDEGMHTEFACLLFSHLRH-------RPHPSVVQRIVKEAVAIEHEFL 297

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R  + +G   ++  T NPF +M  +I L+ + NFF
Sbjct: 298 SDALPVSLIGMNAALMRQYIEFVADRLLYSLGQNKIYNAT-NPFDFMD-MISLQGKTNFF 355

Query: 121 ETRVTEYQQGAG 132
           E RV+EY +   
Sbjct: 356 EKRVSEYAKANV 367


>gi|307192386|gb|EFN75622.1| Ribonucleoside-diphosphate reductase subunit M2 [Harpegnathos
           saltator]
          Length = 344

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K   ++ +T++ +A  +E  + 
Sbjct: 202 MPGLTFSNELISRDEGLHCDFACLMFK-------HVIQKPSFERVKTIIMDAVEIEKEFL 254

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N      Y++F+A+R    +G + ++  +ENPF +M   I L+ + NFF
Sbjct: 255 TQALPVKLIGMNCTLMCTYIEFVADRLFVALGFDKVYN-SENPFSFMD-FISLEGKTNFF 312

Query: 121 ETRVTEYQQGAGLK 134
           E +V EY++   ++
Sbjct: 313 EKKVGEYKKFGVME 326


>gi|17974949|ref|NP_536463.1| C10L [Monkeypox virus Zaire-96-I-16]
 gi|17529816|gb|AAL40494.1|AF380138_36 C10L [Monkeypox virus Zaire-96-I-16]
 gi|51342196|gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus]
 gi|58220500|gb|AAW67788.1| MPXV-SL-030 [Monkeypox virus]
 gi|59858836|gb|AAX09131.1| MPXV-COP-030 [Monkeypox virus]
 gi|68448710|gb|AAY96833.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68448912|gb|AAY97034.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449113|gb|AAY97234.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449313|gb|AAY97433.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449512|gb|AAY97631.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|300872658|gb|ADK39060.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R ++  A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|156087150|ref|XP_001610982.1| ribonucleoside-diphosphate reductase small subunit [Babesia bovis
           T2Bo]
 gi|154798235|gb|EDO07414.1| ribonucleoside-diphosphate reductase small subunit, putative
           [Babesia bovis]
          Length = 339

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 78/133 (58%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +FG  + +++K + P        +  + ++ EA  +E  + 
Sbjct: 202 MPGLTFSNELIARDEGLHADFGCFIYSKLKHKLP-------AECVQQIIKEAVAVERVFV 254

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R    +G+ P++K T+NPF WM E+I ++ + NFF
Sbjct: 255 CDSLPTDLIGMNSMLMAQYIEFVADRLLQALGVPPVYK-TKNPFEWM-ELISVQGKTNFF 312

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   L
Sbjct: 313 EKRVGEYQKSGIL 325


>gi|323098642|gb|ADX22879.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R ++  A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|15232077|ref|NP_189342.1| TSO2 (TSO meaning 'ugly' in Chinese); oxidoreductase/
           ribonucleoside-diphosphate reductase/ transition metal
           ion binding [Arabidopsis thaliana]
 gi|75273949|sp|Q9LSD0|RIR2C_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain C;
           AltName: Full=Ribonucleoside-diphosphate reductase TSO2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit C
 gi|9279629|dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|17380726|gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
 gi|21436297|gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
          Length = 332

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +    L TK  +++ ++++ +A  +E  + 
Sbjct: 189 MPGLTFSNELISRDEGLHCDFAC-------LLYTLLKTKLSEERVKSIVCDAVEIEREFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFF
Sbjct: 242 CDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFF 299

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 300 EKRVGDYQKASVMS 313


>gi|323098445|gb|ADX22683.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R ++  A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSEETVRFIITNAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|312130971|ref|YP_003998311.1| ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
 gi|311907517|gb|ADQ17958.1| Ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
          Length = 328

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 8/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  +       +  K  +++  T++ +A  +E  + 
Sbjct: 190 MPGLTFSNELISRDEGLHRDFACLLYTKY------IVNKLPEEQVYTIIKDAVEIEKEFV 243

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NAP   QY++F+A+     + L+ ++  T NPF +M  +I L+ + NFF
Sbjct: 244 SDALPVSLIGMNAPQMCQYIEFVADHLLESLNLKKVYNAT-NPFDFMD-LISLQGKTNFF 301

Query: 121 ETRVTEYQQGAG 132
           E RV EYQ+   
Sbjct: 302 EKRVGEYQKAGV 313


>gi|154296564|ref|XP_001548712.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
 gi|150843273|gb|EDN18466.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
          Length = 407

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        +  +Q  + ++ EA  +E  + 
Sbjct: 254 MAGLTFSNELISRDEGLHTDFACLLFSHLKH-------RPSKQAVQDVITEAVEIEQEFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G +  +K   NPF +M E I L  + NFF
Sbjct: 307 TEALPCALLGMNSNLMKQYIEFVADRLLLSLGNDKYYKSA-NPFDFM-ENISLAGKTNFF 364

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 365 EKRVGDYQKAGVM 377


>gi|46122063|ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1]
          Length = 399

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + + +K        +  +Q  + ++ +A  +E  + 
Sbjct: 250 MPGLSFSNELISRDEGLHTDFACLLHSHLKG-------RASKQMIQDIITDAVSIEQEFL 302

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G E ++K T NPF +M E I L  + NFF
Sbjct: 303 TEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYKST-NPFDFM-ENISLGGKTNFF 360

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   L
Sbjct: 361 EKRVADYQKAGVL 373


>gi|255711354|ref|XP_002551960.1| KLTH0B03938p [Lachancea thermotolerans]
 gi|238933338|emb|CAR21522.1| KLTH0B03938p [Lachancea thermotolerans]
          Length = 403

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 261 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIIERIITEAVEIEQRYF 313

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 314 RDALPVSLLGMNADLMNQYVEFVADRLLVALGNQKFYNVT-NPFDFM-ENISLAGKTNFF 371

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 372 EKRVSDYQKAGVM 384


>gi|297818266|ref|XP_002877016.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322854|gb|EFH53275.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 329

 Score =  175 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +    L TK  +++ ++++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGLHCDFAC-------LLYTLLKTKLSEERVKSIVCDAVEIEREFV 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++  T NPF WM E+I L+ + NFF
Sbjct: 239 CDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVT-NPFDWM-ELISLQGKTNFF 296

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 297 EKRVGDYQKASVMS 310


>gi|294877483|ref|XP_002768004.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239870142|gb|EER00722.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 247

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 8/124 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +FG  + N +K      +T+  +++   ++  A  +E  + 
Sbjct: 108 MPGLTFSNELISRDEGLHTDFGCLLYNMLK------FTRLPEERVEDIVRSAVNVEREFI 161

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P G +G+NA    +Y++F+A+R    +G   ++    NPF WM+ +I L+ + NFF
Sbjct: 162 TDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIYNSA-NPFDWMT-MISLQGKTNFF 219

Query: 121 ETRV 124
           E RV
Sbjct: 220 EKRV 223


>gi|320164906|gb|EFW41805.1| ribonucleotide reductase m2 polypeptide [Capsaspora owczarzaki ATCC
           30864]
          Length = 352

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +         +        ++ +A  +E  + 
Sbjct: 215 MPGLTFSNELISRDEGLHCDFACMLFGLL-------NNRPSNADVLAIIKDAVAIEQEFL 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N    + Y++F+A+R    +G E  +K  ENPF +M  +I L+ + NFF
Sbjct: 268 TDALPVALIGMNGGLMKTYIEFVADRLLVALGQEKHYK-VENPFDFMD-LISLQGKTNFF 325

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 326 ERRVGEYQKPGVMS 339


>gi|320580024|gb|EFW94247.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia angusta DL-1]
          Length = 408

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL           ++ EA  +E  Y 
Sbjct: 265 MPGLTFSNELICRDEGLHTDFACLLFS-------HLNNTPNNDIVLKIITEAVDIEKRYF 317

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 318 TDALPVNLLGMNCSLMCQYVEFVADRLLLSLGCKKHYNAT-NPFDFM-ENISLAGKTNFF 375

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 376 EKRVSDYQKAGVM 388


>gi|290977320|ref|XP_002671386.1| predicted protein [Naegleria gruberi]
 gi|284084954|gb|EFC38642.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 74/134 (55%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   + + +K      +TK  QQ   +++ EA  +E  + 
Sbjct: 200 MPGLAFSNELISRDEGLHTDFACLLYSTLK------FTKLPQQVVHSLVSEAVEIEKEFI 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+   +QY++ +A+R    +G + ++  + NPF WM+ +I +  + NFF
Sbjct: 254 CESLPVDLIGMNSRLMQQYIEMVADRLLVSLGYDKIYN-SPNPFDWMN-IISVSGKTNFF 311

Query: 121 ETRVTEYQQGAGLK 134
           E +V EY +   + 
Sbjct: 312 EKKVGEYAKANIMS 325


>gi|71024571|ref|XP_762515.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
 gi|46101992|gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
          Length = 424

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        +        ++ EA  +E A+ 
Sbjct: 277 MPGLTFSNELISRDEGLHTDFACLLFSHLRR-------RAHPDTVLKIITEAVEIEKAFL 329

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++++A+R    +G  P+   +  PF +M+  I L+ + NFF
Sbjct: 330 CESIPVALIGMNSKLMCQYIEYVADRLLVSLG-NPVHYGSTCPFDFMT-NISLEGKTNFF 387

Query: 121 ETRVTEYQQGAGLKWD 136
           E +V EY +    + D
Sbjct: 388 EKKVAEYAKAGVARKD 403


>gi|294659365|ref|XP_461732.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
 gi|199433907|emb|CAG90185.2| DEHA2G04268p [Debaryomyces hansenii]
          Length = 426

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 285 MPGLTFSNELICRDEGLHTDFACLLFS-------HLQNRPDAVIVERIITEAVTIEKEFF 337

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G + ++  T NPF +M E I L  + NFF
Sbjct: 338 VDALPISLLGMNCNLMCQYVEFVADRLLVALGNKKVYNVT-NPFDFM-ENISLAGKTNFF 395

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 396 EKRVSDYQKAGVM 408


>gi|321263777|ref|XP_003196606.1| ribonucleoside-diphosphate reductase [Cryptococcus gattii WM276]
 gi|317463083|gb|ADV24819.1| Ribonucleoside-diphosphate reductase, putative [Cryptococcus gattii
           WM276]
          Length = 401

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   ++   PH  T         ++ EA  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHTDFACLLFTHLR-RRPHPDT------IARIIKEAVSIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E ++  T NPF +M E+I L+ + NFF
Sbjct: 310 TDALPVSLIGMNAKLMCQYIEFVADRLLVALGNEKIWNST-NPFDFM-EMISLQGKANFF 367

Query: 121 ETRVTEYQQGAG 132
           E+RV+ Y +   
Sbjct: 368 ESRVSAYSKSGV 379


>gi|254586079|ref|XP_002498607.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
 gi|238941501|emb|CAR29674.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
          Length = 412

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  +        ++ EA  +E  Y 
Sbjct: 272 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNRPSPDIVERIITEAVSIEKRYF 324

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E  +  T NPF +M E I L  + NFF
Sbjct: 325 EDALPVALLGMNAALMNQYVEFVADRLLVALGNEKYYNVT-NPFDFM-ENISLAGKTNFF 382

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   + 
Sbjct: 383 EKRVSDYQKAGVMS 396


>gi|156847978|ref|XP_001646872.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117553|gb|EDO19014.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 400

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + IK        K        ++ EA  +E  Y 
Sbjct: 258 MPGLTFSNELICRDEGLHTDFACLLFSHIK-------NKPDPAIVEKIVTEAVEIEKRYF 310

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G E +FK  ENPF +M E I L  + NFF
Sbjct: 311 TDALPVALLGMNADLMNQYVEFVADRLLVAFGNEKVFK-VENPFDFM-ENISLAGKTNFF 368

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+ + +
Sbjct: 369 EKRVSDYQKASVI 381


>gi|74025548|ref|XP_829340.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834726|gb|EAN80228.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         ++  K  + +   ++  A  +E  + 
Sbjct: 198 MPGLTFSNELISRDEGLHTDFACLLY------EKYIVNKLPRDRVLEIICNAVSIEREFI 251

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +     ++NPF +M  +I L+ + NFF
Sbjct: 252 CDALPVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHCN-SKNPFDFMD-MISLQGKTNFF 309

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 310 EKKVGEYQKAGVMS 323


>gi|4836362|gb|AAD30422.1|AF117061_1 ribonucleotide reductase R2 subunit [Aedes albopictus]
          Length = 398

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  Q++   ++ EA L+E  + 
Sbjct: 261 MPGLTFSNELISRDEGLHTDFACLMFK-------YLVQKPSQERVIEIIREAVLIEQEFL 313

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F A+R   ++G++ ++  T+NPF +M E I L+ + NFF
Sbjct: 314 TKALPVDLLGMNCELMSQYIEFEADRLLLELGIDKIYN-TKNPFSFM-EFISLEGKTNFF 371

Query: 121 ETRVTEYQQGAGL 133
           E +V EYQ+   +
Sbjct: 372 EKKVGEYQKWGVM 384


>gi|46446983|ref|YP_008348.1| ribonucleoside-diphosphate reductase small chain [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|46400624|emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 323

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + +Q+  + P        +  + ++  A  +E  + 
Sbjct: 186 MPGLSFANELISRDEGLHCDFACLLYSQLNNKLP-------LETLQAIISHAVAIEKEFV 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G   L+   +NPF +M  +I +  + NFF
Sbjct: 239 QDALPVRLIGMNATLMCQYIEFVADRLLVALGSPKLYN-VDNPFDFMD-LISMPGKTNFF 296

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   + 
Sbjct: 297 ERRVSEYQKSGVMS 310


>gi|58260834|ref|XP_567827.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134117207|ref|XP_772830.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255448|gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229908|gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 430

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + N +K        +    +   ++ EA ++E  + 
Sbjct: 282 MPGLTFSNELISRDEGMHTDFACLLYNHLKH-------RCSTDEVHHIVSEALVIEKQFL 334

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QYM+F+A+R    +G   ++  T NPF WM E+I L+ + NFF
Sbjct: 335 TDALPCALIGINAHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFF 392

Query: 121 ETRVTEYQQGAG 132
           E+RV+ YQ+   
Sbjct: 393 ESRVSAYQKANV 404


>gi|321263951|ref|XP_003196693.1| ribonucleotide reductase small subunit [Cryptococcus gattii WM276]
 gi|317463170|gb|ADV24906.1| Ribonucleotide reductase small subunit, putative [Cryptococcus
           gattii WM276]
          Length = 430

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + N +K        +    +   ++ EA ++E  + 
Sbjct: 282 MPGLTFSNELISRDEGMHTDFACLLYNHLKH-------RCSTDEVHRIVSEALVIEKQFL 334

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QYM+F+A+R    +G   ++  T NPF WM E+I L+ + NFF
Sbjct: 335 TDALPCALIGINAHLMCQYMEFVADRLVVDLGYPKIYNAT-NPFDWM-ELISLQGKANFF 392

Query: 121 ETRVTEYQQGAG 132
           E+RV+ YQ+   
Sbjct: 393 ESRVSAYQKANV 404


>gi|190896520|gb|ACE96773.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|50286273|ref|XP_445565.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524870|emb|CAG58476.1| unnamed protein product [Candida glabrata]
          Length = 400

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K   +    ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLNHKPDPEVVERIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G + ++   ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNAQLMNQYVEFVADRLLVAFGNKKVYN-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   + 
Sbjct: 370 EKRVSDYQKAGVMS 383


>gi|326403282|ref|YP_004283363.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
 gi|325050143|dbj|BAJ80481.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
          Length = 338

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH N  I +      ENP +WT+E +++           E A+ 
Sbjct: 197 MKGMGQIVSWSVRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFI 256

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                     GL A   ++Y+++IA+RR  Q+GL PLF   +NP PW+ E+++  +  NF
Sbjct: 257 DLAFEFGAVEGLTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNF 316

Query: 120 FETRVTEYQQGA-GLKWD 136
           FE R TEY + +    WD
Sbjct: 317 FENRATEYSKASTAGSWD 334


>gi|58260896|ref|XP_567858.1| ribonucleoside-diphosphate reductase [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134116993|ref|XP_772723.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255341|gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229939|gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 401

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   ++   PH  T         ++ EA  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHTDFACLLFTHLR-RRPHPDT------IARIIKEAVTIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E ++  T NPF +M E+I L+ + NFF
Sbjct: 310 TDALPVSLIGMNAKLMCQYIEFVADRLLVAMGNEKIWNST-NPFDFM-EMISLQGKANFF 367

Query: 121 ETRVTEYQQGAG 132
           E+RV+ Y +   
Sbjct: 368 ESRVSAYSKSGV 379


>gi|148259750|ref|YP_001233877.1| ribonucleotide-diphosphate reductase subunit beta [Acidiphilium
           cryptum JF-5]
 gi|146401431|gb|ABQ29958.1| Ribonucleoside-diphosphate reductase [Acidiphilium cryptum JF-5]
          Length = 338

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH N  I +      ENP +WT+E +++           E A+ 
Sbjct: 197 MKGMGQIVSWSVRDESLHCNSVIKLFRTFVAENPEIWTEELRREIYLCCATIVDHEDAFI 256

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                     GL A   ++Y+++IA+RR  Q+GL PLF   +NP PW+ E+++  +  NF
Sbjct: 257 DLAFEFGAVEGLTAEEVKRYIRYIADRRLLQLGLNPLFHVDKNPLPWLDEMLNAVEHTNF 316

Query: 120 FETRVTEYQQGA-GLKWD 136
           FE R TEY + +    WD
Sbjct: 317 FENRATEYSKASTAGSWD 334


>gi|18640273|ref|NP_570429.1| CMLV039 [Camelpox virus]
 gi|18482949|gb|AAL73746.1|AF438165_36 ribonucleotide reductase small subunit [Camelpox virus M-96]
 gi|19717972|gb|AAG37497.1| CMP39L [Camelpox virus CMS]
          Length = 319

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++   +++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVISIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + Y++F+A+R   ++G + ++    NPF +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYIEFVADRLISELGFKKIYNVI-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|79160106|gb|AAI08038.1| Rrm2b protein [Danio rerio]
          Length = 349

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH NF   + + +         K    +   ++ +A  +E  + 
Sbjct: 212 MPGLTYSNELISRDEGLHCNFACLMYSYLVK-------KPSVDRVNDIIAKAVSIEQEFL 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R    +GL   +  +ENPF +M E I L+ + NFF
Sbjct: 265 TEALPVNLIGMNCSLMKQYIEFVADRLLTDLGLPKAY-CSENPFDFM-ESISLEGKTNFF 322

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 323 EKRVAEYQRLGVMS 336


>gi|195436539|ref|XP_002066225.1| GK22247 [Drosophila willistoni]
 gi|194162310|gb|EDW77211.1| GK22247 [Drosophila willistoni]
          Length = 395

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 258 MPGLTFSNEMISRDEGLHCDFAVLMFQ-------HLVQRPSRERIIEIIRDAVQIEQEFL 310

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 311 TVALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFSFM-EMISLDGKTNFF 368

Query: 121 ETRVTEYQQGAGL 133
           E +V EYQ+   +
Sbjct: 369 EKKVGEYQRMGVV 381


>gi|55742360|ref|NP_001007164.1| ribonucleoside-diphosphate reductase subunit M2 B [Danio rerio]
 gi|29561808|emb|CAD87804.1| novel protein similar to vertebrate ribonucleotide reductase M2 B
           (TP53 inducible) (RRM2B) [Danio rerio]
          Length = 349

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH NF   + + +         K    +   ++ +A  +E  + 
Sbjct: 212 MPGLTYSNELISRDEGLHCNFACLIYSYLVK-------KPSVDRVNDIIAKAVSIEQEFL 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R    +GL   +  +ENPF +M E I L+ + NFF
Sbjct: 265 TEALPVNLIGMNCSLMKQYIEFVADRLLTDLGLPKAY-CSENPFDFM-ESISLEGKTNFF 322

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 323 EKRVAEYQRLGVMS 336


>gi|303278144|ref|XP_003058365.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459525|gb|EEH56820.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 338

 Score =  174 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       +L  K      R ++ EA  +E  + 
Sbjct: 196 MPGLTFSNELISRDEGLHRDFACLLYS-------YLQNKPDVSIVRQIVCEAVEIEKEFV 248

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     +Y++F+A+    Q+GLE  +    NPF +M E+I L+ + NFF
Sbjct: 249 CDALPVSLVGMNKDLMSEYIEFVADHLLGQLGLEKEYNTV-NPFEFM-ELISLQGKTNFF 306

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 307 EKRVGEYQKSGVM 319


>gi|195172750|ref|XP_002027159.1| GL20023 [Drosophila persimilis]
 gi|198459455|ref|XP_001361381.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
 gi|194112972|gb|EDW35015.1| GL20023 [Drosophila persimilis]
 gi|198136695|gb|EAL25959.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
          Length = 391

 Score =  174 bits (442), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + + +       HL  +  +++   ++ +A  +E  + 
Sbjct: 254 MPGLTFSNELISRDEGLHCDFAVLMYH-------HLVQRPKRERIIEIIRDAVEIEQEFL 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 307 TEALPVNLIGMNCVLMSQYIEFVADRLLGELGVGKIYN-TKNPFNFM-EMISLDGKTNFF 364

Query: 121 ETRVTEYQQGAGLK 134
           E +V EYQ+   + 
Sbjct: 365 EKKVAEYQRMGVVT 378


>gi|303272255|ref|XP_003055489.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463463|gb|EEH60741.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 322

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K            ++ + ++ +A  +E  + 
Sbjct: 180 MRGLTFSNELISRDEGLHCDFACLLYSMLKH-------PLEPERLQEIVKDAVEIEKEFV 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +    VG+NA    +Y++F+A+R   Q+G++ ++  T NPF WM E I L+ + NFF
Sbjct: 233 CDALSCALVGMNADLMSEYIEFVADRLLVQLGVDKVWN-TPNPFDWM-ESISLQGKTNFF 290

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 291 ERRVGEYQRNGVM 303


>gi|190896508|gb|ACE96767.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896514|gb|ACE96770.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896522|gb|ACE96774.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896540|gb|ACE96783.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896542|gb|ACE96784.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|190896510|gb|ACE96768.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896556|gb|ACE96791.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896562|gb|ACE96794.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|18640102|ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
 gi|18448509|gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
          Length = 320

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++   +++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSKEVITSIIIDAVNIEKEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++F+A+R   ++G E +F    NPF +M E I L+ + NFF
Sbjct: 236 TVAIPVDLIGMNCCLMSQYIEFVADRLLTELGCEKVFNVY-NPFSFM-EYISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+     
Sbjct: 294 ERRVSEYQKMGVFT 307


>gi|194883840|ref|XP_001976005.1| GG22616 [Drosophila erecta]
 gi|190659192|gb|EDV56405.1| GG22616 [Drosophila erecta]
          Length = 393

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 70/132 (53%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +   ++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQRPKHERIIEIIRDAVAIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQGAG 132
           E +V EYQ+   
Sbjct: 367 EKKVAEYQRMGV 378


>gi|190896516|gb|ACE96771.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|160942848|ref|ZP_02090088.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445900|gb|EDP22903.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
          Length = 347

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
           H  +     GLN      Y++++ N R   +G   L+   E       W+S+  D    +
Sbjct: 267 HYVIGDDIPGLNRQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y +   L  D
Sbjct: 327 TDFFEARSTAYAKSTALIDD 346


>gi|187607401|ref|NP_001119973.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus (Silurana)
           tropicalis]
 gi|165971068|gb|AAI58191.1| LOC100144925 protein [Xenopus (Silurana) tropicalis]
          Length = 346

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +         K  +++   ++  A  +E  + 
Sbjct: 209 MPGLTFSNELISRDEGLHTDFACLMFHYLVK-------KPTEERVTEIIVNAVRIEQEFL 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    + Y++F+A+R   ++G    FK  ENPF +M E I L+ + NFF
Sbjct: 262 TEALPVSLIGMNCTLMKTYIEFVADRLLVELGCSKAFK-AENPFDFM-ENISLEGKTNFF 319

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+ A +
Sbjct: 320 EKRVSEYQRFAVM 332


>gi|195119943|ref|XP_002004488.1| GI19586 [Drosophila mojavensis]
 gi|193909556|gb|EDW08423.1| GI19586 [Drosophila mojavensis]
          Length = 393

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVMMFR-------HLVQRPSRERIIEIISDAVTIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCALMSQYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQGAG 132
           E +V EYQ+   
Sbjct: 367 EKKVGEYQRMGV 378


>gi|190896564|gb|ACE96795.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|190896546|gb|ACE96786.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|190896552|gb|ACE96789.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|190896550|gb|ACE96788.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLAFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|67585619|ref|XP_665115.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis TU502]
 gi|54655552|gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis]
          Length = 296

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K + P         + + ++ EA  +E  + 
Sbjct: 159 MPGLTFSNELISRDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFL 211

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R    + +  ++  + NPF WM  +I L+ + NFF
Sbjct: 212 CDSLPVDLIGMNSRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWMD-LISLQGKTNFF 269

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ    +
Sbjct: 270 EKRVGEYQMAGVM 282


>gi|313115920|ref|ZP_07801347.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310621684|gb|EFQ05212.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 347

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
           H  +     GLN      Y++++ N R   +G   L+   E       W+S+  D    +
Sbjct: 267 HYVIGDDIPGLNRQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y +   L  D
Sbjct: 327 TDFFEARSTAYAKSTALIDD 346


>gi|295103295|emb|CBL00839.1| Ribonucleotide reductase, beta subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 347

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T E  Q  R M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNIITELQKEQPELFTAESVQALREMMREGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
           H  +     GLN      Y++++ N R   +G   L+   E       W+S+  D    +
Sbjct: 267 HYVIGDDIPGLNRQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y +   L  D
Sbjct: 327 TDFFEARSTAYAKSTALIDD 346


>gi|148912897|ref|YP_001293211.1| hypothetical protein GTPV_gp017 [Goatpox virus Pellor]
          Length = 321

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K               + +++EA  +E  + 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLIFKHLKY-------PPSNDIIKIIINEAVSIEKEFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++FIA+R   ++G + +F  + NPF +M E I L+ + NFF
Sbjct: 237 TNIIPVKLIGMNCDLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFF 294

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   + 
Sbjct: 295 EKRVSEYQKMGVIS 308


>gi|195401438|ref|XP_002059320.1| GJ18335 [Drosophila virilis]
 gi|194142326|gb|EDW58732.1| GJ18335 [Drosophila virilis]
          Length = 394

 Score =  173 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQRPCRERIIEIISDAVTIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     +Y++F+A+R   ++G+  L+  T+NPF +M E+I L  + NFF
Sbjct: 310 TDALPVNLIGMNCALMSEYIEFVADRLLVELGVGKLYN-TKNPFTFM-EMISLDGKTNFF 367

Query: 121 ETRVTEYQQGAG 132
           E +V EYQ+   
Sbjct: 368 EKKVGEYQRMGV 379


>gi|190896532|gb|ACE96779.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896554|gb|ACE96790.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|301166951|emb|CBW26530.1| putative ribonucleoside-diphosphate reductase small chain subunit
           [Bacteriovorax marinus SJ]
          Length = 322

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 7/135 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  F   +   +  E      +  ++    ++ EA  +E  + 
Sbjct: 183 MPGLCTSNEFISRDEGLHCEFACHIHELLTPEE-----QLNKETITQIITEAVSIEKEFI 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA    +Y++F+A+   +++G E  +  TENPF WM E+I L+ + NFF
Sbjct: 238 TEAIPVSLIGMNADMMSRYIEFVADYWLNRLGCEKAYN-TENPFDWM-ELISLEGKTNFF 295

Query: 121 ETRVTEYQQGAGLKW 135
           E RV+EYQ+   L  
Sbjct: 296 EKRVSEYQKPGVLGD 310


>gi|190896538|gb|ACE96782.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896548|gb|ACE96787.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896558|gb|ACE96792.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  173 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++    NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVA-NPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|110802082|ref|YP_699620.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens SM101]
 gi|110682583|gb|ABG85953.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens SM101]
          Length = 344

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++TKE +++ R M+      EIA+ 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMMRTGVEHEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKN 118
           H  +     G+N    E+Y+++I N R   IGLEPLF+ Y ENP PW+    D  + + +
Sbjct: 266 HYVIGDNVTGINKNLIERYIKYIGNLRAKAIGLEPLFEGYNENPAPWVDYYADANQVKTD 325

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE + T Y +   L  D
Sbjct: 326 FFEAKSTAYAKAGALIDD 343


>gi|312075738|ref|XP_003140550.1| ribonucleotide reductase M2 B [Loa loa]
 gi|307764288|gb|EFO23522.1| ribonucleotide reductase M2 B [Loa loa]
          Length = 350

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   IK        K  +++   ++ EA  +E  Y 
Sbjct: 213 MPGLTHSNELISRDEGLHRDFACLLYTYIK-------NKPSEERIYQIIREAVDIEKEYL 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++++A+    ++    ++ Y++NPF +M E I ++ + NFF
Sbjct: 266 TEALPVDLIGINCKLMCQYIEYVADHLLTELHCAKMY-YSDNPFDFM-ERISIEAKTNFF 323

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+   L
Sbjct: 324 EKRVSEYQKAGVL 336


>gi|190896518|gb|ACE96772.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++ Y  NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|211956300|ref|YP_002302368.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
 gi|115503095|gb|ABI99013.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
          Length = 321

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  Q+              +   ++ EA  +E ++ 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLMFKQLLH-------PPNPSRIINIIVEAVSIEKSFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++F+A+R   ++G   +FK +ENPF +M E I L+ + NFF
Sbjct: 237 TTALPVKLIGMNCELMCQYIEFVADRLLSELGCTKIFK-SENPFDFM-ESISLEGKTNFF 294

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   + 
Sbjct: 295 EKRVSDYQKMGIMS 308


>gi|290995765|ref|XP_002680453.1| predicted protein [Naegleria gruberi]
 gi|284094074|gb|EFC47709.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + + +K      +TK  QQ   ++++EA  +E  + 
Sbjct: 200 MPGLSFSNELISRDEGLHTDFACLLYSTLK------YTKLPQQVVHSLVYEAVEIEKEFI 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+   +QY++ +A+R    IG E ++  + NPF WM+ +I +  + NFF
Sbjct: 254 SESLPVDLIGMNSRLMQQYIEMVADRLLVSIGYEKIYN-SSNPFDWMN-IISVSGKTNFF 311

Query: 121 ETRVTEYQQGAGLK 134
           E +V EY +   + 
Sbjct: 312 EKKVGEYAKANIMS 325


>gi|19113338|ref|NP_596546.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe 972h-]
 gi|9297110|sp|P36603|RIR2_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3378511|emb|CAA20100.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe]
          Length = 391

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        +  ++    ++ EA  +E  Y 
Sbjct: 249 MPGLTFSNELICRDEGLHTDFACLMFSHLKH-------RPGRKVVEAIIVEAVDIEKEYF 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 302 TDALPVSLLGMNKDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFF 359

Query: 121 ETRVTEYQQGAGLK 134
           E +V++YQ    + 
Sbjct: 360 EKKVSDYQIAGVMS 373


>gi|294055010|ref|YP_003548668.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614343|gb|ADE54498.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
          Length = 360

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 56/132 (42%), Positives = 87/132 (65%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI + ++Y +RDES H+    ++I  +  EN  +WT EF+++ R ++ EA  LE  +  
Sbjct: 221 PGIGQMFRYTLRDESNHIEVFRNLIMDLIEENEDVWTPEFREELRDLMREAVTLEKDFIR 280

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
           + +P   VGL+A    QY+ +IA+RR   +GL PL    +NPFPW++E++D+KKE+NFFE
Sbjct: 281 DCLPVNSVGLSADEFCQYIDYIADRRLEGVGLAPLSPGVDNPFPWLAEMMDIKKEQNFFE 340

Query: 122 TRVTEYQQGAGL 133
            RVTEYQ+ + L
Sbjct: 341 GRVTEYQKASAL 352


>gi|187903099|ref|YP_001883390.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
 gi|187384748|gb|ACD03521.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
          Length = 343

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 71/134 (52%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + +  +       L  +  +++   ++ EA  +E  + 
Sbjct: 199 MPGLTFSNELISRDEGMHCDFAVLLFKRY------LVNRPSEERVGEIVREAVTIEQEFL 252

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G++ ++  T+NPF +M  +I L  + NFF
Sbjct: 253 TDALPVSLIGMNCGLMSQYIEFVADRLLVDLGMKRIYN-TKNPFDFMD-MISLDGKTNFF 310

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+    K
Sbjct: 311 EKRVGDYQRLGVAK 324


>gi|21492474|ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus]
          Length = 321

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K            +    ++ EA  +E  + 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLIFKHLKY-------PPSNEIITIIIKEAVSIEKEFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++FIA+R   ++G + +F  + NPF +M E I L+ + NFF
Sbjct: 237 TNIIPVKLIGMNCDLMSQYIEFIADRLLLELGCDKVF-MSINPFDFM-ENISLEGKTNFF 294

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   + 
Sbjct: 295 EKRVSEYQKMGVIS 308


>gi|284039889|ref|YP_003389819.1| ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
 gi|283819182|gb|ADB41020.1| Ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
          Length = 349

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K  + +   ++  A  +E  + 
Sbjct: 188 MPGLTFSNELISRDEGLHRDFACMLY------TDHIVNKLPESQIYDIIRNAVEIEQEFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA   +QY+ F+A+     +GL  ++    NPF +M  +I L+ + NFF
Sbjct: 242 ADALPVSLIGMNAELMKQYIAFVADHLLVTLGLRKMYNVA-NPFDFMD-MISLQGKTNFF 299

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+G  + 
Sbjct: 300 EKRVGEYQRGEVMS 313


>gi|163753569|ref|ZP_02160692.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
 gi|161325783|gb|EDP97109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
          Length = 326

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + +       N HL  K  +++ R ++ +A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGVHCDFAVHL------HNNHLVNKVPKERIRAIIVDALNIEREFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++G E  +  + NPF +M  +I L+ + NFF
Sbjct: 241 TESLPVSLIGMNAKLMTQYLEFVTDRLLQELGCEKEYNVS-NPFDFMD-MISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   L 
Sbjct: 299 EKRVSEYQKAGVLN 312


>gi|281200507|gb|EFA74725.1| ribonucleotide reductase small subunit [Polysphondylium pallidum
           PN500]
          Length = 335

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  +++        K       T++ +A   E  + 
Sbjct: 189 MHGLTFSNELISRDEGLHCDFACLLYQKLQ-------NKLDNNTIETIIRDAVACEKEFI 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+ S  QY++F A+R    +G + ++  + NPF WM E+I L+++ NFF
Sbjct: 242 TESLPVDLIGMNSRSMSQYIEFCADRLLLSLGYKKIYN-SSNPFDWM-EMISLQRKTNFF 299

Query: 121 ETRVTEYQQGAGLKW 135
           E +V+EYQ+    K 
Sbjct: 300 EGKVSEYQKSGVAKQ 314


>gi|18311342|ref|NP_563276.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens str. 13]
 gi|110801267|ref|YP_697050.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens ATCC 13124]
 gi|168205189|ref|ZP_02631194.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|168210336|ref|ZP_02635961.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|168213271|ref|ZP_02638896.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|168216675|ref|ZP_02642300.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
 gi|169347055|ref|ZP_02865997.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|182625797|ref|ZP_02953564.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|18146026|dbj|BAB82066.1| ribonucleoside-diphosphate reductase beta subunit [Clostridium
           perfringens str. 13]
 gi|110675914|gb|ABG84901.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens ATCC 13124]
 gi|169296738|gb|EDS78867.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|170663363|gb|EDT16046.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|170711548|gb|EDT23730.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|170715235|gb|EDT27417.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|177908953|gb|EDT71440.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|182381151|gb|EDT78630.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
          Length = 344

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++TKE +++ R M+      EIA+ 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRSIIKELKEEIPEVFTKELKEELREMVRTGVEHEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKN 118
           H  +     G+N    E+Y+++I N R   IGLEPLF+ Y ENP PW+    D  + + +
Sbjct: 266 HYVIGDNVTGINKNLIERYIKYIGNLRVKAIGLEPLFEGYNENPAPWVDYYADANQVKTD 325

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE + T Y +   L  D
Sbjct: 326 FFEAKSTAYAKAGALIDD 343


>gi|68485781|ref|XP_713171.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|68485874|ref|XP_713125.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434604|gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434651|gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|238883648|gb|EEQ47286.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 394

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++   + + +K        K   +    ++ EA  +E  Y 
Sbjct: 254 MPGLTFSNELICRDEGIHTDYACLLFSYLK-------NKPSSEIIEKIITEAVDIEKEYF 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R     G +  +  T NPF +M E I L  + NFF
Sbjct: 307 SDALPVSLLGMNCDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFF 364

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   ++
Sbjct: 365 EKRVSDYQKAGVME 378


>gi|86132508|ref|ZP_01051102.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
 gi|85817069|gb|EAQ38253.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
          Length = 328

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 8/135 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + +       N HL  K  +++   ++  A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGVHCDFAVHL------HNHHLVNKVPKERITEIIVNALDIEREFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++++ +R   ++  E ++  T NPF +M  +I L+ + NFF
Sbjct: 240 TESLPVSLIGMNSNLMTQYLEYVTDRLLTELDCEKVYN-TANPFDFMD-MISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EYQ+   +K 
Sbjct: 298 EKRVGEYQKAGVVKD 312


>gi|302682638|ref|XP_003031000.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
 gi|300104692|gb|EFI96097.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
          Length = 362

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   ++  ++        +   +    ++ EA  +E  + 
Sbjct: 226 MPGLTFSNELITRDEGMHTDFACLLLTHMRR-------RPHPEVIEMIIKEAVAIEKEFL 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G + ++  T NPF +M  +I L+ + NFF
Sbjct: 279 TDALPVSLIGMNADLMCQYIEFVADRLLVALGNDKVWNAT-NPFDFMD-MISLQGKTNFF 336

Query: 121 ETRVTEYQQGAG 132
           E RV++Y+  A 
Sbjct: 337 EKRVSDYKIAAV 348


>gi|146298285|ref|YP_001192876.1| ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
 gi|146152703|gb|ABQ03557.1| Ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
          Length = 325

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 76/136 (55%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + +       N HL  K  +++ + ++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGVHCDFAVHL------HNHHLVNKVPKERIKEIIVDALDIERQFV 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+A+R   ++G E ++  + NPF +M  +I L+ + NFF
Sbjct: 240 TESLPVSLIGMNAGLMTQYLEFVADRLLVELGCERVY-GSANPFDFMD-MISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  D
Sbjct: 298 EKRVAEYQKSGVMNTD 313


>gi|190896526|gb|ACE96776.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ +A  +E  + 
Sbjct: 106 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKDAVDIEREFV 158

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+N     QY++F+A+R    +G   ++ Y  NPF  M E+I L+ + NFF
Sbjct: 159 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVY-YVANPFDGM-ELISLQGKTNFF 216

Query: 121 ETRVTEY 127
           E RV EY
Sbjct: 217 EKRVGEY 223


>gi|209877302|ref|XP_002140093.1| ribonucleotide-diphosphate reductase, small subunit
           [Cryptosporidium muris RN66]
 gi|209555699|gb|EEA05744.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Cryptosporidium muris RN66]
          Length = 346

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +FG  +   +    P+        + + ++ EA  +E A+ 
Sbjct: 209 MPGLTFSNELISRDEGIHADFGCLLYKTLNNRLPYG-------RVQEIIAEAVEVERAFL 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R    + +  ++  T NPF WM  +I L+ + NFF
Sbjct: 262 CDSLPVDLIGMNSRLMAQYIEFVADRLLFALDVPKIYNVT-NPFDWMD-LISLQGKTNFF 319

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ    +
Sbjct: 320 EKRVAEYQMAGVM 332


>gi|297209|emb|CAA48969.1| C8L [Variola virus]
 gi|745144|prf||2015436AF C8L gene
          Length = 333

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFF
Sbjct: 250 TVALPVKLIGMNCEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFF 307

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 308 EKRVGEYQKMGVMSQE 323


>gi|328872436|gb|EGG20803.1| ribonucleotide reductase small subunit [Dictyostelium fasciculatum]
          Length = 335

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + N++         K   +   +++ +A   E  + 
Sbjct: 189 MPGLTFSNELISRDEGLHCDFACLLYNKL-------NNKLDVKTIESIIRDAVECEKEFV 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    +Y++F A+R    +G + ++    NPF WM E+I L ++ NFF
Sbjct: 242 TDSLPVDLIGMNSREMSKYIEFCADRLLVSLGYKKIYNSA-NPFDWM-EMISLMRKANFF 299

Query: 121 ETRVTEYQQGAGLKW 135
           E +V+EY +    K 
Sbjct: 300 EGKVSEYAKAGVAKQ 314


>gi|306478720|ref|NP_042072.2| Ribonucleoside-diphosphate reductase small chain [Variola virus]
 gi|464615|sp|P33799|RIR2_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 319

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFF
Sbjct: 236 TVALPVKLIGMNCEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 294 EKRVGEYQKMGVMSQE 309


>gi|262263187|dbj|BAI48096.1| ribonucleotide reductase M2 [Sus scrofa]
          Length = 355

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 9/126 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 235 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSEQRVKEIIVNAVRIEQEFL 287

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 288 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFGKVFR-VENPFDFM-ENISLEGKTNFF 345

Query: 121 ETRVTE 126
           E RV E
Sbjct: 346 EKRVGE 351


>gi|62637405|ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus W-848-83]
 gi|115503265|gb|ABI99183.1| ribonucleotide reductase small subunit [Deerpox virus W-848-83]
          Length = 321

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  Q+              +   ++ EA  +E ++ 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLMFKQLLY-------PPSTSRIINIIVEAVSIEKSFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G   +FK +ENPF +M E I L+ + NFF
Sbjct: 237 TKALPVKLIGMNCELMCQYIEFVADRLLSELGCNKIFK-SENPFDFM-ESISLEGKTNFF 294

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   + 
Sbjct: 295 EKRVSDYQKMGIMS 308


>gi|9633651|ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus]
 gi|6523870|gb|AAF14903.1|AF170726_19 ribonucleotide reductase, small subunit [Myxoma virus]
 gi|301134541|gb|ADK63655.1| M015L [Myxoma virus]
          Length = 322

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K           +++  +++ EA ++E  + 
Sbjct: 186 MPGLTFSNELISRDEGLHCDFACLMFKHLKH-------TPSEERVASIIKEAVVIEQRFL 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++G   +F    NPF +M E I L+ + NFF
Sbjct: 239 TEALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIF-SATNPFDFM-ENISLEGKTNFF 296

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 297 EKRVSDYQRMGVV 309


>gi|170664480|gb|ACB28637.1| small subunit ribonucleotide reductase [Myxoma virus]
 gi|170664652|gb|ACB28808.1| small subunit ribonucleotide reductase [recombinant virus
           6918VP60-T2]
          Length = 322

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K           +++  +++ EA ++E  + 
Sbjct: 186 MPGLTFSNELISRDEGLHCDFACLMFKHLKH-------TPSEERVASIIKEAVVIEQRFL 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++G   +F    NPF +M E I L+ + NFF
Sbjct: 239 TEALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIF-SATNPFDFM-ENISLEGKTNFF 296

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+   +
Sbjct: 297 EKRVSDYQRMGVV 309


>gi|13876672|gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus]
          Length = 321

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K                 +++EA  +E  + 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLIFKHLKY-------PPSNDIITIIINEAVSIEKEFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++FIA+R   ++G + +F  + NPF +M E I L+ + NFF
Sbjct: 237 TNIIPVKLIGMNCVLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFF 294

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   + 
Sbjct: 295 EKRVSEYQKMGVIS 308


>gi|302678465|ref|XP_003028915.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
 gi|300102604|gb|EFI94012.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
          Length = 331

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   +   ++        +      R ++ EA  +E  + 
Sbjct: 190 MPGLTFSNELITRDEGMHTDFACLLFAHLRR-------RPHPDVVRRIIMEAVTIEQEFL 242

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G E ++  T NPF +M  +I L+ + NFF
Sbjct: 243 TDALPVSLIGMNSTLMCQYIEFVADRLLVALGNEKVYNVT-NPFDFMD-MISLQGKTNFF 300

Query: 121 ETRVTEYQQGAG 132
           E RV++Y+  A 
Sbjct: 301 EKRVSDYKMAAV 312


>gi|544843|gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa]
          Length = 333

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 197 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLYPPSEETVRSIITDAVSIEQEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    + YM+F+A+R   ++G + ++  T NP  +M E I L+ + NFF
Sbjct: 250 TVALPVKLIGMNCEMMKTYMEFVADRLISELGFKRIYNVT-NPSDFM-ENISLEGKTNFF 307

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  +
Sbjct: 308 EKRVGEYQKMGVMSQE 323


>gi|291336894|gb|ADD96423.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C426]
          Length = 147

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/136 (44%), Positives = 91/136 (66%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+++Q +Y +RDESLH+NFG  +IN +K + P +WTK+F++++   + +A  LEI YA
Sbjct: 11  LPGLSDQIRYTLRDESLHINFGTYLINTLKEQYPTIWTKKFEEETIEHIKKAVQLEINYA 70

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           H+ +P+G +GLNA     YM +I NRR   IGL+  F+   NPFPW+SEV+D     NFF
Sbjct: 71  HDVLPRGILGLNADMFVDYMHYIGNRRLEGIGLDYRFESDTNPFPWLSEVVDTGAMTNFF 130

Query: 121 ETRVTEYQQGAGLKWD 136
           E +V +YQ    L+ D
Sbjct: 131 ERKVKDYQNSGVLEDD 146


>gi|22595713|gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus]
          Length = 321

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K                 +++EA  +E  + 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLIFKHLKY-------PPSNDIITIIINEAVSIEKEFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++FIA+R   ++G + +F  + NPF +M E I L+ + NFF
Sbjct: 237 TNIIPVKLIGMNCVLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFF 294

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   + 
Sbjct: 295 EKRVSEYQKMGVIS 308


>gi|15826569|pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer
          Length = 419

 Score =  171 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 279 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYF 331

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFF
Sbjct: 332 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFF 389

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   + 
Sbjct: 390 EKRVSDYQKAGVMS 403


>gi|15896521|ref|NP_349870.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum ATCC 824]
 gi|15026352|gb|AAK81210.1|AE007823_4 Ribonucleotide reductase beta subunit [Clostridium acetobutylicum
           ATCC 824]
 gi|325510679|gb|ADZ22315.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum EA 2018]
          Length = 344

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P ++T+E +++ + M+      EI + 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNIIKELQKEEPDMFTEEIKKELKDMVKTGVENEITWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKN 118
           H  +     G+N    E Y++++ NRR   IG EP+++ Y ENP  W+    D    + +
Sbjct: 266 HYVIGDNIQGINKKLIEDYIKYLGNRRLEAIGFEPIYEGYDENPALWVDIYADANSVKTD 325

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE + T Y + + L  D
Sbjct: 326 FFEAKSTAYAKASTLVDD 343


>gi|225320685|dbj|BAH29738.1| ribonucleoside-diphosphate reductase subunit M2 [Dicyema japonicum]
          Length = 337

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K + P       + +   ++ EA +LE  + 
Sbjct: 197 MPGLTYSNELISRDEGLHTDFACLLYHHLKKKLP-------RDRILQIITEAVVLEKEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+R   ++G +  + Y +NPF +M E I L  + NFF
Sbjct: 250 TEALPVALIGMNVNLMSQYIEFVADRLIIELGYDKHY-YAQNPFDFM-ENISLSGKTNFF 307

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 308 EKRVGEYQRMGVM 320


>gi|66475262|ref|XP_627447.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
 gi|9652154|gb|AAF91416.1|AF275635_1 ribonucleotide reductase R2 subunit [Cryptosporidium parvum]
 gi|46228920|gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
          Length = 352

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K + P         + + ++ EA  +E  + 
Sbjct: 215 MPGLTFSNELISRDEGLHADFACLIYKALKFKLP-------APRVQQIISEAVEVERNFL 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+    QY++F+A+R    + +  ++  + NPF WM  +I L+ + NFF
Sbjct: 268 CDSLPVDLIGMNSRLMAQYIEFVADRLLFALDIPKIYNVS-NPFDWMD-LISLQGKTNFF 325

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ    +
Sbjct: 326 EKRVGEYQMAGVM 338


>gi|332031690|gb|EGI71130.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex
           echinatior]
          Length = 210

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K   ++ ++++ +A  +E  + 
Sbjct: 69  MPGLTFSNELISRDEGLHCDFACLMFK-------HIVQKPSFERVKSIVMDAVEIEKEFL 121

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N      Y++F+A+R    +G E ++  +ENPF +M   I +  + NFF
Sbjct: 122 TQALPVELIGMNRTFMCNYIEFVADRLFVALGFEKVYN-SENPFSFMD-FISMMGKTNFF 179

Query: 121 ETRVTEYQQGAGLKWD 136
           E +V EY++   ++ D
Sbjct: 180 EKKVGEYKKFGVMEED 195


>gi|221120499|ref|XP_002159812.1| PREDICTED: similar to hCG23833 [Hydra magnipapillata]
          Length = 387

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 72/134 (53%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I RDE LH +F   +         H+  K  +++ + ++ +A  +EI + 
Sbjct: 243 LPGVTFSNELISRDEGLHCDFACLMYK-------HIVNKPSEERVKQIIRDAVAIEIEFL 295

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N    + Y++F A+R  + +G    +   ENPF +M E I L ++ NFF
Sbjct: 296 TESLPCDLLGMNKSLMKTYIEFCADRLINALGYSKEWN-VENPFDFM-ENISLARKANFF 353

Query: 121 ETRVTEYQQGAGLK 134
           E+RV++YQ+   + 
Sbjct: 354 ESRVSDYQKAGVMD 367


>gi|126662515|ref|ZP_01733514.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
 gi|126625894|gb|EAZ96583.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
          Length = 325

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + + +       H+  K  +++   ++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGMHCDFAVHLHSH------HIVNKVPKERITEIIVDALNIERQFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++G + ++  + NPF +M  +I L+ + NFF
Sbjct: 240 TESLPVSLIGMNATLMTQYLEFVTDRLLVELGCDRVYN-SSNPFDFMD-MISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+   +  D
Sbjct: 298 EKRVAEYQKAGVMNSD 313


>gi|324509007|gb|ADY43795.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 337

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   IK        K  Q++   ++ EA  LE  Y 
Sbjct: 200 MKGLTHSNELISRDEGLHRDFACLLYKYIKH-------KPSQEQVYEIIKEAVSLEQEYL 252

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++++A+    ++G   ++    NPF +M E + ++ + NFF
Sbjct: 253 TEALPVDLIGMNCRLMSQYIEYVADHLLTELGYPKVYN-ASNPFDFM-ENLSIEAKTNFF 310

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   L 
Sbjct: 311 ERRVSEYQRAGVLS 324


>gi|291562343|emb|CBL41159.1| Ribonucleotide reductase, beta subunit [butyrate-producing
           bacterium SS3/4]
          Length = 346

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T    Q  R M+ E    EIA+ 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNIITELQKEQPELFTAGSVQALREMMREGVEQEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
           H  +     GLN      Y++++ N R   +G   L+   E       W+S+  D    +
Sbjct: 266 HYVIGDDIPGLNRQMISDYIRYLGNLRWTSLGYPALYPGFESEPESMEWVSQYADANMVK 325

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y +   L  D
Sbjct: 326 TDFFEARSTAYAKSTALIDD 345


>gi|68069763|ref|XP_676793.1| ribonucleotide reductase small subunit [Plasmodium berghei strain
           ANKA]
 gi|56496646|emb|CAI04349.1| ribonucleotide reductase small subunit, putative [Plasmodium
           berghei]
          Length = 158

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + ++ + P        +  + ++ EA  +E ++  E
Sbjct: 23  GLTFSNELISRDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICE 75

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE 
Sbjct: 76  SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWMD-LISLQGKTNFFEK 133

Query: 123 RVTEYQQGAGLKW 135
           RV +YQ+   +  
Sbjct: 134 RVADYQKSGVMAQ 146


>gi|297449|emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe]
 gi|447147|prf||1913428B ribonucleotide reductase:SUBUNIT=small
          Length = 391

 Score =  170 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        +  ++  + ++ EA  +E  Y 
Sbjct: 249 MPGLTFSNELICRDEGLHTDFACLMFSHLKH-------RPGRKLLKPIIVEAVDIEKEYF 301

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G +  +  T NPF +M E I L  + NFF
Sbjct: 302 TDALPVSLLGMNKDLMCQYIEFVADRLLVALGNDKYYNVT-NPFDFM-ENISLAGKTNFF 359

Query: 121 ETRVTEYQQGAGLK 134
           E +V++YQ    + 
Sbjct: 360 EKKVSDYQIAGVMS 373


>gi|290771185|emb|CAY80753.2| Rnr2p [Saccharomyces cerevisiae EC1118]
          Length = 399

 Score =  170 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   + 
Sbjct: 370 EKRVSDYQKAGVMS 383


>gi|73852496|ref|YP_293780.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
 gi|72415212|emb|CAI65449.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
          Length = 325

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K   +    ++  A  LE  + 
Sbjct: 184 MPGLTFSNELISRDEGLHTDFACMLYRN------HIIHKLPYETVLDIITNAVELERLFI 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA S   Y++F+A+R    +G    +    NPF WM E+I L+ + NFF
Sbjct: 238 CEALPVSLIGINAESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFF 295

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 296 EKRVGEYQKAGVMD 309


>gi|323347997|gb|EGA82256.1| Rnr2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 399

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   + 
Sbjct: 370 EKRVSDYQKAGVMS 383


>gi|6322434|ref|NP_012508.1| Rnr2p [Saccharomyces cerevisiae S288c]
 gi|1172946|sp|P09938|RIR2_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 1;
           AltName: Full=Ribonucleotide reductase R2 subunit 1;
           AltName: Full=Ribonucleotide reductase small subunit 1
 gi|52695523|pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695524|pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695525|pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695526|pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|172450|gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit [Saccharomyces
           cerevisiae]
 gi|1008142|emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae]
 gi|285812874|tpg|DAA08772.1| TPA: Rnr2p [Saccharomyces cerevisiae S288c]
          Length = 399

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   + 
Sbjct: 370 EKRVSDYQKAGVMS 383


>gi|151945057|gb|EDN63308.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae YJM789]
 gi|190409471|gb|EDV12736.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae RM11-1a]
 gi|256271075|gb|EEU06176.1| Rnr2p [Saccharomyces cerevisiae JAY291]
          Length = 399

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   + 
Sbjct: 370 EKRVSDYQKAGVMS 383


>gi|9631087|ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
 gi|3822355|gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
          Length = 348

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  +    + R ++ +A  +E  + 
Sbjct: 212 MPGLTFSNELISRDEGLHCDFACLLFK-------HLVQRPSAARVREIVTDAVAIEQRFL 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +GLN  +  QY++F+A+R   ++     +  T NP  +M+ +I L+ + NFF
Sbjct: 265 TEALPVRLLGLNCETMSQYIEFVADRLLLELVGAKHYN-TPNPLDFMN-LISLEGKTNFF 322

Query: 121 ETRVTEYQQGAGL 133
           E +V EYQ+   +
Sbjct: 323 EKKVGEYQKFGVM 335


>gi|207343947|gb|EDZ71248.1| YJL026Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 399

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   + 
Sbjct: 370 EKRVSDYQKAGVMS 383


>gi|195027582|ref|XP_001986661.1| GH20400 [Drosophila grimshawi]
 gi|193902661|gb|EDW01528.1| GH20400 [Drosophila grimshawi]
          Length = 393

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVMMFQ-------HLVQRPSRERIIEIVSDAVTIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     +Y++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCALMSEYIEFVADRLLVELGVGKIYN-TKNPFTFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQGAG 132
           E +V EYQ+   
Sbjct: 367 EKKVGEYQRMGV 378


>gi|283481249|emb|CAZ69365.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 99B1]
          Length = 325

 Score =  170 bits (432), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K   +    ++  A  LE  + 
Sbjct: 184 MPGLTFSNELISRDEGLHTDFACMLYRN------HIIHKLPYETVLDIITNAVELERLFI 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA S   Y++F+A+R    +G    +    NPF WM E+I L+ + NFF
Sbjct: 238 CEALPVSLIGINAESMSTYIKFVADRLLISLGYAKHYNVV-NPFEWM-ELISLEGKTNFF 295

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 296 EKRVGEYQKAGVMD 309


>gi|172448|gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) [Saccharomyces
           cerevisiae]
          Length = 399

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   + 
Sbjct: 370 EKRVSDYQKAGVMS 383


>gi|266623614|ref|ZP_06116549.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
 gi|288864591|gb|EFC96889.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
          Length = 346

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +     R M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNMILELKNEEPELFTPDRVDVYREMIKEGCRQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
           H  +     GL       Y+Q++ N RC  +G EP+++  E       W+S+  +    +
Sbjct: 267 HYAIGDKVPGLTKDMITDYIQYLGNLRCMSLGFEPIYEGHEKEPESMAWVSQYSNANMIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y + + L  D
Sbjct: 327 TDFFEARSTAYAKSSALVDD 346


>gi|330994651|ref|ZP_08318574.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
 gi|329758292|gb|EGG74813.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
          Length = 365

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+ +   + +RDESLH +    +      ENP +WT   +   R +  +    E A+ 
Sbjct: 223 LKGMGQIVSWSVRDESLHCDSMARLFRVFVQENPEIWTDTLRDDIRQICRDIVEHEDAFI 282

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             +   G   GL+A   ++Y++F+ANRR  Q+GL+ ++    NP PW+ E+++  +  NF
Sbjct: 283 DLSFEMGAVEGLDAGQVKRYIRFVANRRLGQLGLDGIYDIATNPLPWVDEMVNAVEHANF 342

Query: 120 FETRVTEYQQGAGL-KWD 136
           FE R TEY + +    WD
Sbjct: 343 FENRATEYSRASTTGTWD 360


>gi|323308423|gb|EGA61668.1| Rnr2p [Saccharomyces cerevisiae FostersO]
          Length = 399

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K        ++ EA  +E  Y 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLF-------AHLKNKPDPAIVEKIVTEAVEIEQRYF 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G +  +K  ENPF +M E I L  + NFF
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYK-VENPFDFM-ENISLAGKTNFF 369

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   + 
Sbjct: 370 EKRVSDYQKAGVMS 383


>gi|323453718|gb|EGB09589.1| hypothetical protein AURANDRAFT_60022 [Aureococcus anophagefferens]
          Length = 393

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 7/132 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I RDE LH +F   + +++         +    ++  ++ EA   E+ + 
Sbjct: 253 LPGLGFANELISRDEGLHCDFACALYSRLPGHL-----RLSDAEATAIISEAVDTEVDFV 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   VG+NA     Y++F+A+R    +G   ++    NPF +M E+I ++ + NFF
Sbjct: 308 TDALPVSLVGMNAKLMTDYVKFVADRLLASLGHPKIYGAA-NPFDFM-ELISMQGKTNFF 365

Query: 121 ETRVTEYQQGAG 132
           E RV EYQ+   
Sbjct: 366 EKRVAEYQKANV 377


>gi|6969682|gb|AAF33894.1| TF4L [Vaccinia virus Tian Tan]
          Length = 319

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE L  +F   +         HL     ++  R+++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLRCDFACLMFK-------HLLHPPSEETVRSIITDAVSIEQEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N    E Y++F+A+R   ++G + ++  T NPF +M E I L+ + NFF
Sbjct: 236 TAALPVKLIGMNCEMMETYIEFVADRLISELGFKKIYNVT-NPFDFM-ENISLEGKTNFF 293

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQQ   +  +
Sbjct: 294 EKRVGEYQQMGVMSQE 309


>gi|329113329|ref|ZP_08242110.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
 gi|326697154|gb|EGE48814.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
          Length = 339

 Score =  170 bits (431), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+ +   + +RDE+LH    I +      ENP LWT++ + +   +       E A+ 
Sbjct: 193 LKGMGQIVSWSVRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFI 252

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GLNA   + Y+ FIA+RR  Q+GLEP++  T NP PW+ ++++  +  NF
Sbjct: 253 DLAFEMGAVEGLNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNF 312

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + + 
Sbjct: 313 FENRSTEYSRAST 325


>gi|294463759|gb|ADE77404.1| unknown [Picea sitchensis]
          Length = 289

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F         +    L +K  +++ + ++ +A  +E  + 
Sbjct: 148 MPGLTFSNELISRDEGLHCDFAC-------LLYSLLKSKLSEERVKAIVRDAVDIEREFV 200

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    VG+NA    QY++FIA+R    +G   ++ + ENPF WM  +I L+ + NFF
Sbjct: 201 CEALSCDLVGMNATLMSQYIKFIADRLLVALGHGKMY-HVENPFDWMD-LISLQGKTNFF 258

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+ + + 
Sbjct: 259 ERRVGDYQKASIMS 272


>gi|150024561|ref|YP_001295387.1| ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
 gi|149771102|emb|CAL42569.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
          Length = 325

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 76/136 (55%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + +       N HL  K  +++ R+++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGVHCDFAVHL------HNHHLVNKVPKERIRSIIVDALNIEREFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+A+R   ++G +  +  T NPF +M  +I L+ + NFF
Sbjct: 240 TESLPVSLIGMNAVLMTQYLEFVADRLLVELGCDREYN-TANPFDFMD-MISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLKWD 136
           E +V EYQ+   +  D
Sbjct: 298 EKKVAEYQKAGVMNTD 313


>gi|241951880|ref|XP_002418662.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
 gi|223642001|emb|CAX43965.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
          Length = 394

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++   + + +K        K   +    ++ EA  +E  Y 
Sbjct: 254 MPGLTFSNELICRDEGIHTDYACLLFSYLK-------NKPSPEIIEKIITEAVTIEKKYF 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R     G +  +  T NPF +M E I L  + NFF
Sbjct: 307 SDALPVSLLGMNCDLMCQYVEFVADRLLVAFGNKKYYNVT-NPFDFM-ENISLAGKTNFF 364

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   ++
Sbjct: 365 EKRVSDYQKAGVME 378


>gi|330804590|ref|XP_003290276.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
 gi|325079602|gb|EGC33194.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
          Length = 335

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH NF   +  ++         K   +    ++ +A + E  + 
Sbjct: 189 MPGLTFSNELISRDEGLHCNFACLLYTKLI-------NKLESKTLEAIIRDAVVCEKEFI 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N+ S  QY++F A+R    +G + ++    NPF WM E+I L+++ NFF
Sbjct: 242 CDSLPVDLIGMNSRSMSQYIEFCADRLLVSLGYKKIYN-ASNPFDWM-EMISLQRKTNFF 299

Query: 121 ETRVTEYQQGAG 132
           E +V EY +   
Sbjct: 300 EGKVAEYAKTGV 311


>gi|215401283|ref|YP_002332587.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
 gi|198448783|gb|ACH88573.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
          Length = 313

 Score =  169 bits (430), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 8/135 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F     N    E      K   +    M  EA  +E  + 
Sbjct: 179 MPGLTFSNELISRDEGMHTDFACLYYNTRVNE------KLSYETILDMFKEAVDIEKEFF 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    +Y++F+A+R   Q+G    +    NPFP+M+  I L+ + NFF
Sbjct: 233 TDALPVALLGMNADMMCEYIEFVADRLLLQLGQPKYYN-ARNPFPFMN-NISLEGKTNFF 290

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EY+       
Sbjct: 291 ERRVGEYKMFGTGSD 305


>gi|213402763|ref|XP_002172154.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
 gi|212000201|gb|EEB05861.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
          Length = 392

 Score =  169 bits (430), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F   + + +K        +  ++    ++ EA  +E  Y 
Sbjct: 251 MPGLTFSNELICRDEGVHTDFACLMFSHLKH-------RPGKKVVERIIIEAVNIEKEYF 303

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R    +G E  +  T NPF +M E I L  + NFF
Sbjct: 304 TDALPVYLLGMNCDLMCQYIEFVADRLLLSLGNEKYYNVT-NPFDFM-ENISLAGKTNFF 361

Query: 121 ETRVTEYQQGAGL 133
           E +V++YQ    +
Sbjct: 362 EKKVSDYQIAGVM 374


>gi|9633826|ref|NP_051904.1| gp015L [Rabbit fibroma virus]
 gi|6578545|gb|AAF17899.1|AF170722_17 gp015L [Rabbit fibroma virus]
          Length = 322

 Score =  169 bits (430), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 10/137 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     + ++  ++ EA ++E  + 
Sbjct: 186 MPGLTFSNELISRDEGLHCDFACLMFK-------HLNHTPSETRATDIIKEAVVIEQQFL 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G   +F    NPF +M E I L+ + NFF
Sbjct: 239 TKALPVRLIGINCDLMCQYIEFVADRLVTELGYSKIF-SATNPFDFM-ENISLEGKTNFF 296

Query: 121 ETRVTEYQQ-GAGLKWD 136
           E RV++YQ+ G   K D
Sbjct: 297 EKRVSDYQRMGVASKQD 313


>gi|22549454|ref|NP_689227.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
 gi|22476633|gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
          Length = 313

 Score =  169 bits (430), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 8/135 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F     N    E      K   +    M  EA  +E  + 
Sbjct: 179 MPGLTFSNELISRDEGMHTDFACLYYNTRVNE------KLSYETILDMFKEAVDIEKEFF 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    +Y++F+A+R   Q+G    +    NPFP+M+  I L+ + NFF
Sbjct: 233 TDALPVALLGMNADMMCEYIEFVADRLLLQLGQPKYYN-ARNPFPFMN-NISLEGKTNFF 290

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EY+       
Sbjct: 291 ERRVGEYKMFGTGSD 305


>gi|120437796|ref|YP_863482.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
 gi|117579946|emb|CAL68415.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
          Length = 325

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 76/136 (55%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + + NQ      HL  +  ++K R +L +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGMHCDFAVHLHNQ------HLVNQVPKEKIREILIDALNIEREFV 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++  E  +  + NPF +M  +I+L+ + NFF
Sbjct: 240 TESLPVSLIGMNAKLMTQYLEFVTDRLLVELDCEKEYNVS-NPFDFMD-MINLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV+EYQ+   +  D
Sbjct: 298 EKRVSEYQKAGVMNKD 313


>gi|145352915|ref|XP_001420779.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581014|gb|ABO99072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 346

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +  ENP       ++    ++ +A  +E  + 
Sbjct: 208 MRGLTFSNELISRDEGLHCDFACLLYSML--ENP-----LSEKVLHQLVGDAVTIEKEFV 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +    VG+NA     Y++F+A+R   Q+G+  L+    NPF WM E+I L+ + NFF
Sbjct: 261 CDALSCSLVGMNANMMSTYIEFVADRLLLQLGVSKLYNAV-NPFDWM-ELISLQGKANFF 318

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   ++
Sbjct: 319 EHRVDQYQKAGVMQ 332


>gi|68161126|gb|AAY86994.1| ribonucleotide reductase M2b [Ictalurus punctatus]
          Length = 192

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 9/126 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH NF   + +Q++        K    + + ++ +A  +E  + 
Sbjct: 76  MPGLTYSNELISRDEGLHCNFACLIYSQLQK-------KPSADRVKDIITKAVRIEQEFL 128

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G+  +++  ENPF +M E I L+ + NFF
Sbjct: 129 TEALPVDLIGINSYLMKQYIEFVADRLLTDLGIPKVYE-AENPFDFM-EFISLEGKTNFF 186

Query: 121 ETRVTE 126
           E RV E
Sbjct: 187 EKRVAE 192


>gi|299747484|ref|XP_001837064.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|298407540|gb|EAU84681.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 379

 Score =  169 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 69/132 (52%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I RDE +H +F   +   ++   PH  T         ++ EA  +E  + 
Sbjct: 237 LPGLTFSNELISRDEGMHTDFACLLFAYLRK-RPHSDT------ILAIVTEAVEIEKEFF 289

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G +  + + +NPF +M E+I ++ + NFF
Sbjct: 290 SDALPVSLIGMNSSLMNQYIEFVADRLLTSLGNDKHY-HVDNPFDFM-ELISMEGKANFF 347

Query: 121 ETRVTEYQQGAG 132
           E RV++Y +   
Sbjct: 348 EKRVSDYAKANV 359


>gi|255080138|ref|XP_002503649.1| predicted protein [Micromonas sp. RCC299]
 gi|226518916|gb|ACO64907.1| predicted protein [Micromonas sp. RCC299]
          Length = 324

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K             + + ++ +A  +E  + 
Sbjct: 180 MRGLTFSNELISRDEGLHCDFACLLYSMLKH-------PLDPARLQEIVKDAVDIEKEFV 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +    VG+NA    +Y++F+A+R   Q+G+E ++  T NPF WM E+I L+ + NFF
Sbjct: 233 CDALSCALVGMNADLMSEYIEFVADRLMTQLGVEKVWN-TPNPFEWM-EMISLQGKANFF 290

Query: 121 ETRVTEYQQGAGLK 134
           E RV +YQ+   + 
Sbjct: 291 EHRVDQYQKANVMT 304


>gi|17551968|ref|NP_497821.1| RiboNucleotide Reductase family member (rnr-2) [Caenorhabditis
           elegans]
 gi|1172941|sp|P42170|RIR2_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3873950|emb|CAA84688.1| C. elegans protein C03C10.3, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 381

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + ++++        K  QQ+   ++ +A  +E  + 
Sbjct: 244 MPGLTHSNELISRDEGLHRDFACLLYSKLQK-------KLTQQRIYDIIKDAVAIEQEFL 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+    ++G + L+K ++NPF +M E I +  + NFF
Sbjct: 297 TEALPVDMIGMNCRLMSQYIEFVADHLLVELGCDKLYK-SKNPFDFM-ENISIDGKTNFF 354

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+   +
Sbjct: 355 EKRVSEYQRPGVM 367


>gi|225434341|ref|XP_002276454.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 841

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I R E LH +F   + + ++ + P        QK   ++HEA  +E  + 
Sbjct: 701 MPGLTFSNELISRYEGLHCDFACLLYSLLQKQLPW-------QKVHHIVHEAMEIETQFI 753

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+ A     Y++F+ +R    +G E  +   ENPF WM E I L+   NFF
Sbjct: 754 CEALPCALIGMKATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFF 811

Query: 121 ETRVTEYQQGAGLK 134
           + R+ +YQ+ + + 
Sbjct: 812 QRRMGDYQKASIMS 825


>gi|27923845|sp|Q9QTF2|RIR2_RSIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|5688956|dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus]
 gi|327396894|dbj|BAK14260.1| ribonucleotide diphosphate reductase small subunit [Red sea bream
           iridovirus]
          Length = 312

 Score =  169 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   +  Q       +  K  Q  +  ++ +A  +E A+ 
Sbjct: 176 MPGLAFSNELISRDEGLHCDFACMLFRQ-------MANKPCQDDAHQIISDAVDIETAFF 228

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+N+ S + Y+QF+A+R    +G   ++  + NPF +M   I ++ + NFF
Sbjct: 229 REALKTPLLGMNSDSMKLYIQFVADRLLDALGYAKMYNVS-NPFDFMD-NISIEGKTNFF 286

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+     
Sbjct: 287 ERRVSEYQRMGVFT 300


>gi|292658982|gb|ADE34370.1| ribonucleotide reductase small chain [Turbot reddish body
           iridovirus]
          Length = 312

 Score =  169 bits (428), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   +  Q       +  K  Q+ +  ++ +A  +E A+ 
Sbjct: 176 MPGLAFSNELISRDEGLHCDFACMLFRQ-------MANKPSQEDAHQIISDAVDIETAFF 228

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+N+ S   Y+QF+A+R    +G   ++    NPF +M   I ++ + NFF
Sbjct: 229 REALKTPLLGMNSDSMRLYIQFVADRLLDALGYAKMYNVA-NPFDFMD-NISIEGKTNFF 286

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+     
Sbjct: 287 ERRVSEYQRMGVFT 300


>gi|190570498|ref|YP_001974856.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|213019257|ref|ZP_03335064.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
 gi|190356770|emb|CAQ54129.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|212995366|gb|EEB56007.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
          Length = 329

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH N  I++ N    EN  +W  EF+++  +       LE  + 
Sbjct: 181 MKGMGQIIAWSARDETLHTNSIINLFNTFIKENNEIWNDEFKEELYSACRTIVELEDEFI 240

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                     GL+A     Y+++IANRR  Q+GL+ ++   +NP PW+ E+++  +  NF
Sbjct: 241 SLAFDLGDVEGLSAEEVRNYIRYIANRRLTQLGLKSIYNVKDNPIPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGAG 132
           FE RVTEY + A 
Sbjct: 301 FENRVTEYSRAAT 313


>gi|268575178|ref|XP_002642568.1| C. briggsae CBR-RNR-2 protein [Caenorhabditis briggsae]
 gi|187023588|emb|CAP37241.1| CBR-RNR-2 protein [Caenorhabditis briggsae AF16]
          Length = 365

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  Q++   ++ +A  +E  + 
Sbjct: 228 MPGLTHSNELISRDEGLHRDFACLLYSMLQ-------NKLSQERIFEIIRDAVAIEQEFL 280

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+    ++G + L+   +NPF +M E I +  + NFF
Sbjct: 281 TEALPVDMIGMNCRLMSQYIEFVADHLLQELGCDKLYN-VKNPFDFM-ENISIDGKTNFF 338

Query: 121 ETRVTEYQQGAGL 133
           E RV+EYQ+   +
Sbjct: 339 EKRVSEYQRPGVM 351


>gi|225012154|ref|ZP_03702591.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
 gi|225003709|gb|EEG41682.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
          Length = 325

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + +       N HL  K    + + +L +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGVHCDFAVHL------HNHHLVNKVPPARIKEILLDALTIEREFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++GLE  F  T NPF +M  +I L+ + NFF
Sbjct: 240 TESLPISLIGMNAKLMTQYLEFVTDRLLQELGLEKEFNVT-NPFDFMD-MISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   L 
Sbjct: 298 EKRVGEYQKAGVLN 311


>gi|258542157|ref|YP_003187590.1| ribonucleotide-diphosphate reductase subunit beta [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633235|dbj|BAH99210.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636294|dbj|BAI02263.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639347|dbj|BAI05309.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642403|dbj|BAI08358.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645458|dbj|BAI11406.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648511|dbj|BAI14452.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651564|dbj|BAI17498.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654555|dbj|BAI20482.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 339

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+ +   + +RDE+LH    I +      ENP LWT++ + +   +       E A+ 
Sbjct: 193 LKGMGQIVSWSVRDETLHCLSIIRLFRVFIQENPELWTEQLRTELTDICRTIVEHEEAFI 252

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GLNA   + Y+ FIA+RR  Q+GLEP++  T NP PW+ ++++  +  NF
Sbjct: 253 DLAFEMGAVEGLNAEQVKTYIHFIADRRLTQLGLEPIYNTTTNPLPWLDDMLNAVEHTNF 312

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + + 
Sbjct: 313 FENRATEYSRAST 325


>gi|305665630|ref|YP_003861917.1| putative ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
 gi|88710386|gb|EAR02618.1| probable ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
          Length = 328

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 73/136 (53%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++ + +         H+  K  +++   ++ +A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGMHCDYAVHLHKN------HIVNKVTKERITDIIVDALNIEREFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+ +R   ++  + ++  + NPF +M  +I L+ + NFF
Sbjct: 241 TESLPVSLIGMNSKLMTQYLEFVTDRLLVELECDKVYN-SSNPFDFMD-MISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV+EYQ+   L  D
Sbjct: 299 EKRVSEYQKAGVLNKD 314


>gi|308809930|ref|XP_003082274.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
 gi|116060742|emb|CAL57220.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
          Length = 382

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   ++           +     ++ +A  +E  + 
Sbjct: 244 MRGLTFSNELISRDEGLHCDFACLLYGMLQ-------NPLSEATLHHIVGDAVKIEKEFV 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +    VG+NA     Y++F+A+R   Q+G   LF    NPF WM E+I L+ + NFF
Sbjct: 297 CDALSCSLVGMNADMMSTYIEFVADRLLIQLGASKLFNAV-NPFDWM-ELISLQGKANFF 354

Query: 121 ETRVTEYQQGAGL 133
           E RV +YQ+   +
Sbjct: 355 EHRVDQYQKAGVM 367


>gi|292397811|ref|YP_003517877.1| RR2b [Lymantria xylina MNPV]
 gi|291065528|gb|ADD73846.1| RR2b [Lymantria xylina MNPV]
          Length = 338

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 11/138 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  +    + R ++ +A  +E  + 
Sbjct: 202 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVQRPSAARVREIVTDAVAIEQRFL 254

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +GLN  +  QY++F+A+R    +     +  T NP  +M+ +I L+ + NFF
Sbjct: 255 TEALPVRLLGLNCETMSQYIEFVADRLLVDLIGTKHYN-TANPLDFMT-LISLEGKTNFF 312

Query: 121 ETRVTEYQQGAGL--KWD 136
           E +V EYQ+   +  K D
Sbjct: 313 EKKVGEYQKFGVMFAKDD 330


>gi|257456224|ref|ZP_05621421.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
 gi|257446310|gb|EEV21356.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
          Length = 351

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I++++ E P L+T E  +  R+M+ E    EIA+ 
Sbjct: 211 MPGSVQEIRYINRDENTHLWLFRSIIHELQKEEPQLFTPENNELFRSMIREGCEQEIAWG 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
           H  +     GL       Y+Q++ N RC  +G EPL++ + E P    W+S+  +    +
Sbjct: 271 HYVIGDDIPGLTRGMVTDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIK 330

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + LK D
Sbjct: 331 TDFFEAKSTAYAKSSALKDD 350


>gi|91215505|ref|ZP_01252476.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
 gi|91186457|gb|EAS72829.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
          Length = 326

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 75/134 (55%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + + N+      HL  +  +++ R ++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGVHCDFAVHLHNE------HLVNQVPKERIRAIIVDALTIEREFV 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+A+R   ++G +  +  T NPF +M  +I L+ + NFF
Sbjct: 240 TESLPVSLIGMNSNLMTQYLEFVADRLLFELGCDKEY-GTANPFDFMD-MISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 298 EKRVGEYQKAGVMN 311


>gi|196233679|ref|ZP_03132520.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
 gi|196222349|gb|EDY16878.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
          Length = 390

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 55/134 (41%), Positives = 78/134 (58%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI + +QY +RDES H+  G  ++ Q+  ENP +WT EF+ +    + E   LE  + 
Sbjct: 249 MTGIGQMFQYTLRDESNHIELGRYILTQLIAENPDIWTPEFRAELVEFMREGVELEKEFV 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P+  VG+       Y+++ A+RR   + L  L     NPF W+ EVI L+KEKNFF
Sbjct: 309 RDCLPEDGVGMTQADFLTYVEYNADRRLAGLDLPALSGVKTNPFAWLDEVIFLRKEKNFF 368

Query: 121 ETRVTEYQQGAGLK 134
           ETRVTEYQ    LK
Sbjct: 369 ETRVTEYQTSGSLK 382


>gi|182419335|ref|ZP_02950587.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237666940|ref|ZP_04526925.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182376666|gb|EDT74238.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237658139|gb|EEP55694.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 344

 Score =  168 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ EN  L+T+E + + R M+      EI + 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNIIKELQNENAELFTEEIKNELREMMKTGVEQEILWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKK-EKN 118
           H  +     G+N    E+Y++++ N+R  +I LEPLF+  + NP PW+    +    + +
Sbjct: 266 HYVIGDKIQGINKKLIEEYIKYLGNKRLKEINLEPLFEGHDVNPAPWVDRQSNANSVKTD 325

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE R T Y + A L  D
Sbjct: 326 FFEARSTAYAKAATLVDD 343


>gi|89890041|ref|ZP_01201552.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
 gi|89518314|gb|EAS20970.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
          Length = 330

 Score =  168 bits (426), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + +       N HL  K  +++   ++ +A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGMHCDFAVHL------HNHHLVNKVPKERITEIIVDALNIEREFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++  +P++  T NPF +M  +I ++ + NFF
Sbjct: 241 TESLPASLIGMNAKLMTQYLEFVTDRLLGELECDPVYNVT-NPFDFMD-LIGMEGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 299 EKRVGEYQKAGVMN 312


>gi|71083845|ref|YP_266565.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71062958|gb|AAZ21961.1| ribonucleoside-diphosphate reductase beta chain [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 337

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +  +   ENP +WT E + +           E A+ 
Sbjct: 196 MKGMGQIVTWSVRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFI 255

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +  NF
Sbjct: 256 DLAFEMGPMQGLTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNF 315

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 316 FEGRSTEYSKAAT 328


>gi|70936723|ref|XP_739266.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
           chabaudi]
 gi|56516136|emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium
           chabaudi chabaudi]
          Length = 349

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + ++ + P        +  + ++ EA  +E ++  E
Sbjct: 214 GLTFSNELISRDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICE 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE 
Sbjct: 267 SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWMD-LISLQGKTNFFEK 324

Query: 123 RVTEYQQGAGLKW 135
           RV +YQ+   +  
Sbjct: 325 RVADYQKSGVMAQ 337


>gi|323452425|gb|EGB08299.1| hypothetical protein AURANDRAFT_59025 [Aureococcus anophagefferens]
          Length = 319

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G++   + I RDE LH +F   + ++++ +   +       +  +++  A  +E ++ 
Sbjct: 182 MPGLSFSNELIARDEGLHCDFACLLYSKLRKKLSDV-------QVASIVGAAVDIEKSFV 234

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N+ S  +Y++F A+R   ++G   L+  T NPF WM E+I L+ + NFF
Sbjct: 235 VSALPVELIGMNSKSMCKYIEFCADRLLLELGYSTLYGAT-NPFDWM-ELISLQGKTNFF 292

Query: 121 ETRVTEYQQG 130
           E RV EY + 
Sbjct: 293 EKRVGEYAKA 302


>gi|19881429|ref|NP_612246.1| putative ribonucleotide reductase small subunit [Infectious spleen
           and kidney necrosis virus]
 gi|19773634|gb|AAL98748.1|AF371960_24 putative ribonucleotide reductase small subunit [infectious spleen
           and kidney necrosis virus]
          Length = 312

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   +  Q       +  K  Q  +  ++ +A  +E A+ 
Sbjct: 176 MPGLAFSNELISRDEGLHCDFACMLFRQ-------MANKPCQDDAHQIISDAVDIETAFF 228

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+N+ S   Y+QF+A+R    +G   ++    NPF +M   I ++ + NFF
Sbjct: 229 QEALKTPLLGMNSDSMRLYIQFVADRLLDALGYAKMYNVA-NPFDFMD-NISIEGKTNFF 286

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+     
Sbjct: 287 ERRVSEYQRMGVFT 300


>gi|50237508|gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus]
          Length = 312

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   +  Q       +  K  Q  +  ++ +A  +E A+ 
Sbjct: 176 MPGLAFSNELISRDEGLHCDFACMLFRQ-------MANKPCQDDAHEIISDAVDIETAFF 228

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+N+ S + Y+QF+A+R    +G   ++    NPF +M   I ++ + NFF
Sbjct: 229 REALKTPLLGMNSDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMD-NISIEGKTNFF 286

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+     
Sbjct: 287 ERRVSEYQRMGVFT 300


>gi|332045030|gb|EGI81223.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4]
          Length = 327

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + +         HL  K  +++ R +L +A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGMHCDFAVHL------HEHHLINKVPKERIREILVDALNIEREFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+ +     +G E  +  T NPF +M  +I L+ + NFF
Sbjct: 241 TESLPVSLIGMNSKLMSQYLEFVTDGLLQDLGCEKEY-GTANPFDFMD-MISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   L 
Sbjct: 299 EKRVSEYQKAGVLN 312


>gi|94986920|ref|YP_594853.1| ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731169|emb|CAJ54531.1| Ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 333

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/136 (46%), Positives = 79/136 (58%), Gaps = 3/136 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDE LH  FGI VI  +  E             R +  E    EIAYA
Sbjct: 201 MKGTAEQFQYILRDEVLHCTFGITVIKGLIEEENITLDP---TAVRQLWDEVEAAEIAYA 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           +  + +  +G NA       +FIANRR  Q+G++  F   +N  PW+ E  +L+KEKNFF
Sbjct: 258 NYILHEPIIGYNADLHIGQFRFIANRRSRQLGMKEPFPGAKNVLPWLDEQSNLRKEKNFF 317

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRVTEYQ G GLKWD
Sbjct: 318 ETRVTEYQTGGGLKWD 333


>gi|91763118|ref|ZP_01265082.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717531|gb|EAS84182.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 342

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +  +   ENP +WT E + +           E A+ 
Sbjct: 201 MKGMGQIVTWSVRDETLHCNSMIRLFKEFIHENPEIWTPELKAELYKACRTIIEHEDAFI 260

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +  NF
Sbjct: 261 DLAFEMGPMQGLTAQDVKLYIRFIANRRLSQLGLEPIYDVDKNPLTWLDSMLNAVEHMNF 320

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 321 FEGRSTEYSKAAT 333


>gi|15150459|ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|15149031|gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|22595554|gb|AAN02587.1| ribonucleotide reductase small subunit [Lumpy skin disease virus
           NW-LW]
          Length = 321

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +K            +    +++EA  +E  + 
Sbjct: 184 MPGLTFSNELISRDEGLHCDFACLIFKHLKY-------PPSNEIITIIINEAVSIEKEFL 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N     QY++FIA+R   ++G + +F  + NPF +M E I L+ + NFF
Sbjct: 237 TNIIPVKLIGMNCDLMSQYIEFIADRLLLELGCDKVF-MSTNPFDFM-ENISLEGKTNFF 294

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   + 
Sbjct: 295 EKRVSEYQKMGVIS 308


>gi|156839886|ref|XP_001643629.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114248|gb|EDO15771.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 394

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K        ++ EA  +E  Y 
Sbjct: 252 MPGLTFSNELICRDEGLHTDFASLLFS-------HLDNKPDPAIVEKIVTEAVEIEKRYF 304

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R     G E  +K  ENPF +M E I L  + NFF
Sbjct: 305 IDALPVALLGMNAKLMNQYVEFVADRLLVSFGNEKYYK-VENPFDFM-ENISLAGKTNFF 362

Query: 121 ETRVTEYQQGAGL 133
           E RV++YQ+ + +
Sbjct: 363 EKRVSDYQKASVI 375


>gi|73974202|ref|XP_858105.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 4 [Canis familiaris]
          Length = 374

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 32/156 (20%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI--- 57
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E    
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQVSR 266

Query: 58  --------------------AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF 97
                                +  E +P G +G+N    +QY++F+A+R   ++G   +F
Sbjct: 267 EAYMISTSLFLEIATCRSKHEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVF 326

Query: 98  KYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGL 133
           +  ENPF +M E I L+ + NFFE RV EYQ+ A +
Sbjct: 327 Q-AENPFDFM-ENISLEGKTNFFEKRVAEYQRFAVM 360


>gi|260061082|ref|YP_003194162.1| putative ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
 gi|88785214|gb|EAR16383.1| probable ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
          Length = 328

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++ + +       N HL  K  +++   ++  A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGMHCDYAVHL------HNNHLVNKVPKERITQIITNALDIEREFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++  E ++  T NPF +M  +I L+ + NFF
Sbjct: 241 TESLPVSLIGMNAKLMTQYLEFVTDRLLVELECEKVYNST-NPFDFMD-MISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   + 
Sbjct: 299 EKRVSEYQKAGVMN 312


>gi|156102402|ref|XP_001616894.1| ribonucleoside-diphosphate reductase small chain [Plasmodium vivax
           SaI-1]
 gi|148805768|gb|EDL47167.1| ribonucleoside-diphosphate reductase small chain, putative
           [Plasmodium vivax]
          Length = 349

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 72/133 (54%), Gaps = 9/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + ++ + P        +  + ++ EA  +E ++  E
Sbjct: 214 GLTFSNELISRDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICE 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F + +NPF WM  +I L+ + NFFE 
Sbjct: 267 SLPCDLIGMNSRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWMD-LISLQGKTNFFEK 324

Query: 123 RVTEYQQGAGLKW 135
           RV +YQ+   +  
Sbjct: 325 RVADYQKSGVMAQ 337


>gi|62421216|gb|AAX82336.1| ribonucleotide reductase small chain [Orange-spotted grouper
           iridovirus]
          Length = 312

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RDE LH +F   +  Q       +  K  Q  +  ++ +A  +E A+ 
Sbjct: 176 MPGLAFSNELISRDEGLHCDFACMLFRQ-------MANKPCQDDAHEIISDAVDIETAFF 228

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+N+ S + Y+QF+A+R    +G   ++    NPF +M   I ++ + NFF
Sbjct: 229 REALKTPLLGMNSDSMKLYIQFVADRLLDALGYAKMYN-VGNPFDFMD-NISIEGKTNFF 286

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+     
Sbjct: 287 ERRVSEYQRMGVFT 300


>gi|167760514|ref|ZP_02432641.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
 gi|167661880|gb|EDS06010.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
          Length = 347

 Score =  167 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 74/140 (52%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ ++K E P L+T+   ++ R M+ E    EI++ 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRNILLELKKEEPQLFTESRIEEYREMIKEGCQQEISWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
           H  +     GLN      Y+Q++ N RC  +G  P+++ + + P    W+S+  +    +
Sbjct: 267 HYVIGDDIQGLNRDMVTDYIQYLGNLRCTNLGFAPIYEGHVKEPDSMSWVSQFSNANMIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y + + L  D
Sbjct: 327 TDFFEARSTAYAKSSALVDD 346


>gi|6525234|gb|AAF15363.1|AF205376_1 ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 320

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 9/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + +  + P        Q  + ++ EA  +E ++  E
Sbjct: 185 GLTFSNELISRDEGLHTDFNCLIYSLLDNKLPE-------QMVQNIVKEAVEVERSFICE 237

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE 
Sbjct: 238 SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEK 295

Query: 123 RVTEYQQGAGLKW 135
           RV +YQ+   +  
Sbjct: 296 RVADYQKSGVMAQ 308


>gi|1710398|sp|P50650|RIR2_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|555613|gb|AAA50170.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
          Length = 349

 Score =  167 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 9/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + +  + P        Q  + ++ EA  +E ++  E
Sbjct: 214 GLTFSNELISRDEGLHTDFNCLIYSLLDNKLPE-------QIIQNIVKEAVEVERSFICE 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE 
Sbjct: 267 SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEK 324

Query: 123 RVTEYQQGAGLKW 135
           RV +YQ+   +  
Sbjct: 325 RVADYQKSGVMAQ 337


>gi|227871657|ref|ZP_03990072.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
 gi|227842499|gb|EEJ52714.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
          Length = 347

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL F  +++ ++K E P L+ +    +   M+ +    EIA+ 
Sbjct: 207 MPGSVQEIRYINRDENTHLWFFRNMLLELKKEEPELFDEAHIAEITEMVKKGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
              +     GLN    E Y++++ N R   +GL  L++  E       W+S+  D    +
Sbjct: 267 QYVIGDSIPGLNGKMVEDYIRYLGNLRYRSLGLPNLYEGYEKEPESMKWVSQYADANMVK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y +   ++ D
Sbjct: 327 TDFFEARSTAYAKSTAIEDD 346


>gi|296536499|ref|ZP_06898590.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
 gi|296263178|gb|EFH09712.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
          Length = 343

 Score =  167 bits (424), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I +      ENP +WT++ +     +       E A+ 
Sbjct: 187 MKGMGQIVSWSVRDETLHCLSVIRLFRTFIQENPEIWTEQLKADLVEICTTIVEHEDAFI 246

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                  G  G+     +QY++FIA+RR  Q+GLEP +   +NP PW+ E+++  +  NF
Sbjct: 247 DLAFELGGVQGMEPEDVKQYIRFIADRRLQQLGLEPHYGTEKNPLPWLDEILNAVEHMNF 306

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + + 
Sbjct: 307 FEGRATEYSKAST 319


>gi|307719930|ref|YP_003891070.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
 gi|306978023|gb|ADN08058.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
          Length = 340

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 3/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T E +     M  EA  LE  + 
Sbjct: 203 MLGSAQMIRFIQRDEVTHLVLFQNLINTLRKERPDLFTDELRADVIEMFKEAVKLETEWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL     EQY+Q++A+ R + +G + L+  + NP  W+ +       + NF
Sbjct: 263 KYITQGQILGLTDEIVEQYIQYLADDRLNSVGFDKLYNVS-NPIKWVDDFAKFNDQKTNF 321

Query: 120 FETRVTEYQQGAGLKWD 136
           FE  VT Y +G+ L +D
Sbjct: 322 FEGTVTNYSKGS-LSFD 337


>gi|289742419|gb|ADD19957.1| ribonucleotide reductase beta subunit [Glossina morsitans
           morsitans]
          Length = 396

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F + +         HL  K  +++   ++ +A  +E  + 
Sbjct: 259 MPGLTFSNEMISRDEGLHCEFAVLMFK-------HLIQKPSKERILEIITDAVKIEKEFL 311

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+ S  +Y++++A+R   ++ +   +   ENPF +M++ I +  + NFF
Sbjct: 312 TEALPVDLIGMNSESMCKYIEYVADRLLLELDVGK-YYLAENPFEFMNK-ISIDGKTNFF 369

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV EYQ+      D
Sbjct: 370 EKRVGEYQKIGVSSDD 385


>gi|225010999|ref|ZP_03701465.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
 gi|225004906|gb|EEG42862.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
          Length = 328

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++ + +       N HL  K  + + R +L +A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGMHCDYAVHL------HNHHLINKVPKARIREILVDALNIERTFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   ++  E  +  + NPF +M  +I L+ + NFF
Sbjct: 241 TESLPASLIGMNAKLMTQYLEFVTDRLLVELQCEKEYNVS-NPFDFMD-MISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV+EYQ+   L  D
Sbjct: 299 EKRVSEYQKAGVLNKD 314


>gi|86134368|ref|ZP_01052950.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
 gi|85821231|gb|EAQ42378.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
          Length = 323

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 73/132 (55%), Gaps = 8/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I RDE +H +F + +       N H+  +  + + + ++ +A  +E  + 
Sbjct: 186 LPGLTFSNELISRDEGMHCDFAVHL------HNNHIVNRVPKDRIKEIIVDALDIEREFV 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA    QY++F+ +R   + G E ++  T NPF +M E+I L+ + NFF
Sbjct: 240 TESLPVSLIGMNAKLMTQYLEFVTDRLLLEFGCEKVYDVT-NPFDFM-EMISLEGKTNFF 297

Query: 121 ETRVTEYQQGAG 132
           E RV+EYQ+   
Sbjct: 298 EKRVSEYQKAGV 309


>gi|124808087|ref|XP_001348226.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
 gi|23497116|gb|AAN36665.1|AE014816_50 ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
          Length = 349

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 9/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + +  + P        Q  + ++ EA  +E ++  E
Sbjct: 214 GLTFSNELISRDEGLHTDFNCLIYSLLDNKLPE-------QMVQNIVKEAVEVERSFICE 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE 
Sbjct: 267 SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFFEK 324

Query: 123 RVTEYQQGAGLKW 135
           RV +YQ+   +  
Sbjct: 325 RVADYQKSGVMAQ 337


>gi|32266105|ref|NP_860137.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           hepaticus ATCC 51449]
 gi|32262154|gb|AAP77203.1| ribonucleoside diphosphate reductase [Helicobacter hepaticus ATCC
           51449]
          Length = 349

 Score =  167 bits (423), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++I+ ++ E  HL+T   +++   M  +A  +E  + 
Sbjct: 213 MLGSAQMIRFIQRDEVTHLLLFQNMISSLRKEQGHLFTPSLEEEVVEMFKKAVEIESQWG 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL +    +Y+Q++A+ R   +GL  L+  ++NP  W+ +       + NF
Sbjct: 273 EYITQGQILGLTSEIIREYIQYLADARLKAVGLPQLY-GSKNPIKWVDQFASFNDQKTNF 331

Query: 120 FETRVTEYQQGA 131
           FE +VT Y +G+
Sbjct: 332 FEAKVTNYSKGS 343


>gi|254456975|ref|ZP_05070403.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
 gi|207085767|gb|EDZ63051.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
          Length = 340

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 3/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T + +++   M  EA  LE  + 
Sbjct: 203 MLGSAQMIRFIQRDEVTHLVLFQNLINTLRKERPDLFTDKLKEEVIAMFKEAVQLESEWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL     EQY++F+A+ R   +G E L+  T NP  W+ +       + NF
Sbjct: 263 KYITQGQILGLTNDIVEQYIKFLADERLTAVGFEKLYNVT-NPIKWVDDFAKFNDQKTNF 321

Query: 120 FETRVTEYQQGAGLKWD 136
           FE  VT Y +G+ L +D
Sbjct: 322 FEGTVTNYSKGS-LTFD 337


>gi|320585888|gb|EFW98567.1| ribonucleotide reductase small subunit [Grosmannia clavigera
           kw1407]
          Length = 378

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 9/126 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + +K        +  +Q    ++ +A  +E  + 
Sbjct: 244 MPGLTFSNELISRDEGLHTDFACLLFSHLK-------NRPSKQLIEEIIVDAVKIEQEFL 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+   +QY++F+A+R    +G + ++  T NPF +M E I L  + NFF
Sbjct: 297 TEALPCALLGMNSTLMKQYIEFVADRLLVALGNDKVYNST-NPFDFM-ENISLGGKTNFF 354

Query: 121 ETRVTE 126
           E RV E
Sbjct: 355 EKRVPE 360


>gi|283768723|ref|ZP_06341634.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
 gi|283104509|gb|EFC05882.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
          Length = 348

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ +++ E P L+T    Q  + M+HE    EIA+ 
Sbjct: 208 MPGSVQEIRYINRDENTHLWLFRNILLELQKEEPELFTDSNIQMIKDMIHEGVQQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
              +     GLN+   E Y++++ N R   +GL  L++ Y E P    W+ +  D    +
Sbjct: 268 QYVIGNNIPGLNSQMVEDYIKYLGNTRFATLGLGNLYEGYEEEPETMRWVKQYSDANMVK 327

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE RVT Y + + ++ D
Sbjct: 328 TDFFEARVTAYAKSSAIEDD 347


>gi|20069937|ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|20043331|gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|33331769|gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-A]
          Length = 313

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 8/135 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F     N    E      K   +K   M  EA  +E  + 
Sbjct: 179 MPGLTFSNELISRDEGMHTDFACLYYNTRVKE------KLSYEKILDMFKEAVDIEKEFF 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    +Y++F+A+R   Q+G    +    NPF +M+  I L+ + NFF
Sbjct: 233 TDALPVSLLGMNATMMCEYIEFVADRLLMQLGQPKYYN-ARNPFSFMN-NISLEGKTNFF 290

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EY+       
Sbjct: 291 ERRVGEYKMFGTGSD 305


>gi|331086748|ref|ZP_08335825.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
 gi|330409914|gb|EGG89349.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
          Length = 347

 Score =  166 bits (422), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 75/140 (53%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ +++ E P L+++E +++ R M+ E    EIA+ 
Sbjct: 207 MTGSVQEIRYINRDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
           H  +     GL+      Y++++ N RC  +GL P+++  E       W+S+  +    +
Sbjct: 267 HYVIGDAVSGLSCDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + L  D
Sbjct: 327 TDFFEAKSTAYAKSSALVDD 346


>gi|58040422|ref|YP_192386.1| ribonucleotide-diphosphate reductase subunit beta [Gluconobacter
           oxydans 621H]
 gi|58002836|gb|AAW61730.1| Ribonucleoside-diphosphate reductase beta chain [Gluconobacter
           oxydans 621H]
          Length = 339

 Score =  166 bits (422), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+ +   + +RDE+LH    I +      EN  +WT EF+++   +       E A+ 
Sbjct: 193 LKGMGQIVSWSVRDETLHCLSMIRLFRTFVRENSEIWTPEFREELTQICRTTVEHEDAFI 252

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+++   ++Y++FIA+RR  Q+GL+P++    NP PW+ ++++  +  NF
Sbjct: 253 DLCFEMGPVEGMSSEDVKRYIRFIADRRLTQLGLDPVYGQESNPLPWIDDMLNAVEHANF 312

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + + 
Sbjct: 313 FENRSTEYSRAST 325


>gi|15617531|ref|NP_258331.1| RR2B [Spodoptera litura NPV]
 gi|15553267|gb|AAL01745.1|AF325155_57 ribonucleotide reductase small subunit homolog [Spodoptera litura
           NPV]
          Length = 333

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       H+  K  + +   ++ EA  +E  + 
Sbjct: 194 MPGLTFSNELISRDEGLHTDFACLMYS-------HIVNKPTRDRILDIITEAVAIENEFV 246

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     +Y++F+A+R   ++  E  +  T+NPF +M+ +I L+ + NFF
Sbjct: 247 TEALPVAMLGMNNDLMSKYIEFVADRLLLELIGERHYN-TKNPFDFMN-LISLEGKTNFF 304

Query: 121 ETRVTEYQQGAGLK 134
           E +V+EYQ+   + 
Sbjct: 305 EKKVSEYQKYGVMS 318


>gi|325663145|ref|ZP_08151595.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
 gi|325470599|gb|EGC73829.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
          Length = 347

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 75/140 (53%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ +++ E P L+++E +++ R M+ E    EIA+ 
Sbjct: 207 MTGSVQEIRYINRDENTHLWLFTNILRELRKELPELFSEEKEKEYRQMIREGCEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
           H  +     GL+      Y++++ N RC  +GL P+++  E       W+S+  +    +
Sbjct: 267 HYVIGDAVSGLSCDMITDYVKYLGNLRCKNLGLAPIYEGHEKEPESMGWVSQFSNANMIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + L  D
Sbjct: 327 TDFFEAKSTAYAKSSALVDD 346


>gi|308490981|ref|XP_003107682.1| CRE-RNR-2 protein [Caenorhabditis remanei]
 gi|308250551|gb|EFO94503.1| CRE-RNR-2 protein [Caenorhabditis remanei]
          Length = 377

 Score =  166 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  Q++   ++ +A  +E  + 
Sbjct: 240 MPGLTHSNELISRDEGLHRDFACLLYSMLQ-------NKLTQERIFEIIRDAVCIEQEFL 292

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N     QY++F+A+    ++G + L+   +NPF +M E I +  + NFF
Sbjct: 293 TEALPVDMIGMNCRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFF 350

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   + 
Sbjct: 351 EKRVSEYQRPGVMS 364


>gi|291276761|ref|YP_003516533.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           mustelae 12198]
 gi|290963955|emb|CBG39794.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           mustelae 12198]
          Length = 344

 Score =  166 bits (421), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 72/136 (52%), Gaps = 2/136 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  ++I RDE  HL    ++I  +K E P L+ K+ +++   M   A  +E A+ 
Sbjct: 209 MLGSSQMIRFIQRDEVTHLILFQNMIRTLKKERPDLFDKDLEEEIVEMFRRAVEIEAAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL      QY+Q++A++R  ++G+  L+   E+P  W+ +     ++  NF
Sbjct: 269 EYITQGQILGLTGEVIHQYIQYLADQRLSKVGMPKLYN-VEHPIKWVEQYASFNEQRTNF 327

Query: 120 FETRVTEYQQGAGLKW 135
           FE +VT Y +G+ +  
Sbjct: 328 FEAKVTNYAKGSLIDD 343


>gi|221060582|ref|XP_002260936.1| ribonucleotide reductase small subunit [Plasmodium knowlesi strain
           H]
 gi|193811010|emb|CAQ42908.1| ribonucleotide reductase small subunit,putative [Plasmodium
           knowlesi strain H]
          Length = 349

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 72/133 (54%), Gaps = 9/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + ++ + P        +  + ++ EA  +E ++  E
Sbjct: 214 GLTFSNELISRDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICE 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F + +NPF WM  +I L+ + NFFE 
Sbjct: 267 SLPCDLIGMNSRLMSQYIEFVADRLLECLGSRKIF-HAKNPFNWMD-LISLQGKTNFFEK 324

Query: 123 RVTEYQQGAGLKW 135
           RV +YQ+   +  
Sbjct: 325 RVADYQKSGVMAQ 337


>gi|313683656|ref|YP_004061394.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
 gi|313156516|gb|ADR35194.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
          Length = 339

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 3/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T+E  ++   M  +A  LE A+ 
Sbjct: 203 MLGSAQMIRFIQRDEVTHLVLFQNIINTLRRERSDLFTEELIEEVYDMFRKAVELETAWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL     EQY+Q++A++R   +GL+PL+  + +P  W+ +       + NF
Sbjct: 263 KYITQGQILGLTNEIVEQYIQYLADQRLTAVGLKPLYNVS-HPIKWVDDFSKFNDQKTNF 321

Query: 120 FETRVTEYQQGAGLKWD 136
           FE  VT Y +G+ L +D
Sbjct: 322 FEGTVTNYSKGS-LSFD 337


>gi|320536436|ref|ZP_08036471.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
 gi|320146705|gb|EFW38286.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
          Length = 363

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T E  +  R M+ E    EI + 
Sbjct: 223 MPGSVQEIRYINRDENTHLWLFRSIIQELQKEEPQLFTPENIEMFRAMIKEGCEQEIKWG 282

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
           H  +     GLN      Y+Q++ N RC  +G EPL++ + E P    W+S+  +    +
Sbjct: 283 HYVIGDDIPGLNKQMITDYIQYLGNLRCENLGFEPLYEGHREEPASMSWVSQYSNANLIK 342

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + +  D
Sbjct: 343 TDFFEAKSTAYAKSSAMVDD 362


>gi|131840053|ref|YP_001096062.1| ORF23 [Cyprinid herpesvirus 3]
 gi|84181618|gb|ABC55221.1| hypothetical protein [Cyprinid herpesvirus 3]
 gi|109706628|gb|ABG42854.1| ORF23 [Cyprinid herpesvirus 3]
 gi|129560539|dbj|BAF48834.1| ribonucleotide reductase small chain [Cyprinid herpesvirus 3]
          Length = 335

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 8/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  K  +++ R ++ EA  +E  + 
Sbjct: 196 MPGLTFSNELISRDEGLHRDFACLLFSS------HLRHKPSKERVRAIITEAVEIEKEFL 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   VG+N     +Y+Q++A+    Q+GL  L+  T  PF +M E I L+ + NFF
Sbjct: 250 TQSLPVSLVGMNHDLMCKYIQYVADHLLCQMGLSRLYN-TPCPFDFM-ENISLEGKTNFF 307

Query: 121 ETRVTEYQQ 129
           E RV +YQ 
Sbjct: 308 EKRVADYQV 316


>gi|225677302|ref|ZP_03788281.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
 gi|225590665|gb|EEH11913.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
          Length = 329

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH N  I + N    EN  +W  EF+++  +       LE  + 
Sbjct: 181 MKGMGQIIAWSARDETLHTNSIIMLFNTFIKENNEIWDDEFKEELYSACRTIVELEDEFI 240

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                     GL+A     Y+ ++ANRR  Q+GLE ++   +NP PW+ E+++  +  NF
Sbjct: 241 KLAFDFGDVEGLSAEEVRNYIHYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGAG 132
           FE RVTEY + A 
Sbjct: 301 FENRVTEYSRAAT 313


>gi|323692021|ref|ZP_08106269.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
 gi|323503944|gb|EGB19758.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
          Length = 347

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I +++ E P L+++E     R M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-E 116
              +     GL       Y++++ N RC  +G EPL+    +      W+S+  +    +
Sbjct: 267 CYAIGDEVPGLTKQMITDYIRYLGNLRCSNLGFEPLYDGYVHEPETMAWVSQYSNANMIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y + + L  D
Sbjct: 327 TDFFEARSTAYAKSSALVDD 346


>gi|323486976|ref|ZP_08092290.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
 gi|323399688|gb|EGA92072.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
          Length = 347

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I +++ E P L+++E     R M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFGSIIRELQTEEPSLFSREKTDCYREMIREGCEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-E 116
              +     GL       Y++++ N RC  +G EPL+  Y   P    W+S+  +    +
Sbjct: 267 CYAIGDEVPGLTKQMITDYIRYLGNLRCSNLGFEPLYDGYAHEPETMAWVSQYSNANMIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y + + L  D
Sbjct: 327 TDFFEARSTAYAKSSALVDD 346


>gi|325286576|ref|YP_004262366.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
 gi|324322030|gb|ADY29495.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
          Length = 328

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 8/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++ + +       N HL  K  +++   +L +A  +E  + 
Sbjct: 187 MPGLTFSNELISRDEGMHCDYAVHL------HNHHLINKVPKERITEILVDALDIEREFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+ +R   ++  + ++  + NPF +M  +I L+ + NFF
Sbjct: 241 TESLPVSLIGMNSKLMTQYLEFVTDRLLVELNCDKVYN-STNPFDFMD-MISLQGKTNFF 298

Query: 121 ETRVTEYQQGAG 132
           E RV EYQ+   
Sbjct: 299 EKRVAEYQKSGV 310


>gi|319953269|ref|YP_004164536.1| ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
 gi|319421929|gb|ADV49038.1| Ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
          Length = 326

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + +       N H+  +  +++   +L +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGMHCDFAVHL------HNKHIINQVPKERITEILVDALNIEREFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+ +R   ++  + ++  T NPF +M  +I ++ + NFF
Sbjct: 240 TESLPASLIGMNSKLMTQYLEFVTDRLLVELECDKVYNST-NPFDFMD-MIGMEGKTNFF 297

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV+EYQ+   L  D
Sbjct: 298 EKRVSEYQKAGVLNSD 313


>gi|210616053|ref|ZP_03290925.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
 gi|210149961|gb|EEA80970.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
          Length = 355

 Score =  165 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ ++K E P L+T+++  + R+M+ E    EI + 
Sbjct: 215 MPGSVQEIRYINRDENTHLWLFRNILIELKKEQPDLFTEQYIDEYRSMIKEGCEQEIKWG 274

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
           H  +     GLN      Y+Q++ N RC  +G  P+++  E       W+S+  +    +
Sbjct: 275 HYVIGDDVQGLNREMITDYVQYLGNLRCTNLGFAPIYEGHETEPESMRWVSQYSNANAIK 334

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y + + L  D
Sbjct: 335 TDFFEARSTAYAKSSALVDD 354


>gi|82538850|ref|XP_723858.1| ribonucleotide reductase small chain [Plasmodium yoelii yoelii str.
           17XNL]
 gi|145580416|pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580417|pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580418|pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580419|pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580420|pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580421|pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580422|pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580423|pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|23478298|gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii]
          Length = 349

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 72/133 (54%), Gaps = 9/133 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + ++ + P           + ++ EA  +E ++  E
Sbjct: 214 GLTFSNELISRDEGLHTDFNCLIYSLLENKLPE-------NVVQNIVKEAVEVERSFICE 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE 
Sbjct: 267 SLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFNWMD-LISLQGKTNFFEK 324

Query: 123 RVTEYQQGAGLKW 135
           RV +YQ+   +  
Sbjct: 325 RVADYQKSGVMAQ 337


>gi|153814165|ref|ZP_01966833.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
 gi|317499963|ref|ZP_07958199.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087814|ref|ZP_08336739.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 3_1_46FAA]
 gi|145848561|gb|EDK25479.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
 gi|316898680|gb|EFV20715.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330409509|gb|EGG88950.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 3_1_46FAA]
          Length = 353

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E+P L+      + + +L EA   EI +A
Sbjct: 213 MPGSAQEIRYINRDENTHLWLFRNIIIELRKEHPELFDDHMVSEMKELLMEAVRQEIEWA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
              +     GLN      Y++++ N R   +G  P++   E       W+S+  +    +
Sbjct: 273 CYVIGNEVPGLNEKMITDYIRYLGNLRWKSLGYAPIYPGCEREPETMKWVSQYSNANMVK 332

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y +   L  D
Sbjct: 333 TDFFEARSTAYAKSTALIDD 352


>gi|194755279|ref|XP_001959919.1| GF11796 [Drosophila ananassae]
 gi|190621217|gb|EDV36741.1| GF11796 [Drosophila ananassae]
          Length = 393

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  K  +++   ++ +A  +E  + 
Sbjct: 256 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQKPRRERIIEIIRDAVDIEQEFL 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  + NFF
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGKTNFF 366

Query: 121 ETRVTEYQQGAG 132
           E +V EYQ+   
Sbjct: 367 EKKVGEYQRMGV 378


>gi|328700093|ref|XP_001944536.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Acyrthosiphon pisum]
          Length = 361

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  Q     ++ EA  +E  + 
Sbjct: 221 MPGLTFSNELISRDEGLHTDFACLLFK-------HLEQKPPQAVITHIICEAVTIEQDFL 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   VG++      Y++F+A+R  +++G   +++ + NPFP+M  +I  + + NFF
Sbjct: 274 TNALPVRMVGMSCEKMAVYIEFVADRLLNELGCPTVYR-SSNPFPFMD-LISQQGKTNFF 331

Query: 121 ETRVTEYQQGAG 132
           E RV +YQ+ + 
Sbjct: 332 EKRVGDYQKASV 343


>gi|254517517|ref|ZP_05129573.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
 gi|226911266|gb|EEH96467.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
          Length = 344

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 74/138 (53%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    +++ ++++E P ++T E + + + M+  A   EI++ 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNILKELQLEQPEIFTDEVKNQLKEMMKTAVEHEISWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKN 118
           +  +     G+N      Y++++ N R   IGL+ +++ +  NP  W+  + D    + +
Sbjct: 266 NYVIGDNIQGINKNLINDYIKYLGNLRMKAIGLDAIYEGHDNNPAAWVDILSDANSVKTD 325

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE + T Y +   L  D
Sbjct: 326 FFEAKSTAYAKAGALIDD 343


>gi|154505112|ref|ZP_02041850.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
 gi|153794591|gb|EDN77011.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
          Length = 347

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T E  +  + ML E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNMILEMKKELPELFTPEHIEILKEMLKEGVRQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENP--FPWMSEVIDLKK-E 116
           H  +     GL      +Y+Q++ N R   +G +P++   T+ P    W+S+  +    +
Sbjct: 267 HYVIGNQIAGLTKEMITEYIQYLGNLRFTNLGFDPIYPDQTQEPDSMRWVSQYSNANMVK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L  D
Sbjct: 327 TDFFEAKSTAYAKSTALIDD 346


>gi|40556174|ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
 gi|40233999|gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
          Length = 323

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 8/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +          L  K  Q +   ++  A  +E  + 
Sbjct: 185 MPGLTFSNELISRDEGLHCDFACLLFTNY------LSHKPSQDRVYEIIDSAVSVETEFL 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +    +G+N+ S  +Y++F+++R    +G    +   ENPF +M E I L+ + NFF
Sbjct: 239 TEALSIDLIGMNSKSMIEYIKFVSDRLLVSLGFSKKYN-VENPFSFM-ENISLEGKANFF 296

Query: 121 ETRVTEYQQGAGLK 134
           E RV+ YQ+   + 
Sbjct: 297 EKRVSNYQKMGVMS 310


>gi|42520108|ref|NP_966023.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58696705|ref|ZP_00372253.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|58698234|ref|ZP_00373154.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|225630036|ref|YP_002726827.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
 gi|42409845|gb|AAS13957.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58535261|gb|EAL59340.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58537117|gb|EAL60231.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|225592017|gb|ACN95036.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
          Length = 329

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH N  I + N    EN  +W  EF+++  +       LE  + 
Sbjct: 181 MKGMGQIIAWSARDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFI 240

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                     GL+A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NF
Sbjct: 241 KLAFDLGDVEGLSAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGAG 132
           FE RVTEY + A 
Sbjct: 301 FENRVTEYSRAAT 313


>gi|9632043|ref|NP_048832.1| hypothetical protein PBCV1_A476R [Paramecium bursaria Chlorella
           virus 1]
 gi|1620147|gb|AAC96843.1| contains ribonucleotide reductase (RR) signature; similar to
           tobacco RR small subunit, corresponds to Swiss-Prot
           Accession Number P49730 [Paramecium bursaria Chlorella
           virus 1]
          Length = 324

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 76/134 (56%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  FG  + ++++ + P        +  + ++ EA   E  + 
Sbjct: 188 MPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFF
Sbjct: 241 CDAIPCRLIGMNAELMGQYIEFVADRIFVALGYEKVYN-SKNPFAFM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   +K
Sbjct: 299 EKRVSDYQRPGVMK 312


>gi|325261084|ref|ZP_08127822.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
 gi|324032538|gb|EGB93815.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
          Length = 347

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     ++ ++K E P L+T E  +K R+M+ E    EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRSILMELKKEEPWLFTAEKTEKYRSMIREGCEQEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
           H  +     GLN      Y+Q++ N RC  + LEP+++  E       W+S+  +    +
Sbjct: 267 HYVIGDDIQGLNREMITDYIQYLGNLRCRGLELEPVYEGHEKEPESMSWVSQFSNANMIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y + + L  D
Sbjct: 327 TDFFEARSTAYAKSSALVDD 346


>gi|288800286|ref|ZP_06405744.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288332499|gb|EFC70979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 347

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 6/141 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +       M+ E    EIA+ 
Sbjct: 207 MSGSAQEIRYINRDENTHLWLFRNIIQELKKEEPDLFTPDKVAVYEAMMREGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT----ENPFPWMSEVIDLKK- 115
              +     GLNA   + Y++++ N R H +G + L++      EN   W+S+  +    
Sbjct: 267 QYVIGNDIQGLNAQMVDDYIRYLGNLRWHSLGFDYLYEDNRTEPEN-MRWVSQYSNANMV 325

Query: 116 EKNFFETRVTEYQQGAGLKWD 136
           + +FFE + T Y +   L+ D
Sbjct: 326 KTDFFEAKSTAYAKSTALEDD 346


>gi|58584525|ref|YP_198098.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
 gi|58418841|gb|AAW70856.1| Ribonucleotide reductase, beta subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 331

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH N  I++ N    EN  +W  EF++   +       LE  + 
Sbjct: 181 MKGMGQIIAWSARDETLHTNSIINLFNTFIKENNEIWNDEFKEGLYSACRTIVGLEDEFI 240

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                     GL+A     Y+++IANRR  Q+GL+P++   +NP PW+ E+++  +  NF
Sbjct: 241 KLAFDLGDVEGLSAEEVRNYIRYIANRRLMQLGLKPIYDINDNPLPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGAG 132
           FE RVTEY + A 
Sbjct: 301 FENRVTEYSRAAT 313


>gi|224438210|ref|ZP_03659145.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313144656|ref|ZP_07806849.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313129687|gb|EFR47304.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
          Length = 348

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL     +IN ++ E PHL+T   +++   M  +A  +E  + 
Sbjct: 212 MLGSAQMIRFIQRDEVTHLLVFQQMINALRKEQPHLFTPSLEEEVIAMFQKAVEIESVWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL A    +Y+Q++A+ R   +GL  ++ +++NP  W+ +       + NF
Sbjct: 272 EYITQGQILGLTAEIIREYIQYLADMRLRAVGLREIY-HSKNPIKWVEQFASFNDQKTNF 330

Query: 120 FETRVTEYQQGA 131
           FE +VT Y +G+
Sbjct: 331 FEAKVTNYSKGS 342


>gi|282879357|ref|ZP_06288101.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|282881358|ref|ZP_06290037.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
 gi|281298554|gb|EFA90979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|281304764|gb|EFA96845.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
          Length = 347

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P ++T E  +    M+ E    EIA+ 
Sbjct: 207 MSGSAQEIRYINRDENTHLWLFRNIIKELKKEEPEMFTPEKVKVYEEMMREGVRQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-E 116
              +     GLNA     Y+ ++ N R H +G + L++   + P    W+++  D    +
Sbjct: 267 QYVIGNDIQGLNAQMVTDYIHYLGNLRWHSLGFDYLYEDNQKEPEDMKWVAQYSDPNMVK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   ++ D
Sbjct: 327 TDFFEAKSTAYAKSTAIEDD 346


>gi|269865524|ref|XP_002651954.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063427|gb|EED42101.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 205

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I  +               ++ EA  +E  + 
Sbjct: 71  MPGLTFSNELISRDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFL 121

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 122 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 179

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 180 ERREANYQKG 189


>gi|319902178|ref|YP_004161906.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
 gi|319417209|gb|ADV44320.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
          Length = 347

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+  +  +    M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNIILELKKEEPELFVPDKVKVYEEMMREGVKQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
              +     GL+    E Y+ ++ N R   +G  PL++  +       W+S+  +    +
Sbjct: 267 QYVIGDNIQGLSRKMLEDYIHYLGNLRWKSLGYAPLYEDNQTEPESMHWVSQYSNANMVK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 327 TDFFEAKSTAYAKSTALEDD 346


>gi|212697417|ref|ZP_03305545.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325846383|ref|ZP_08169352.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|212675609|gb|EEB35216.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325481567|gb|EGC84607.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 352

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +IN +K E P L+T E ++   ++L E    EIA+ 
Sbjct: 212 MPGTVQEIRYINRDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
              +     GLN+   E Y++++ N R   +GL  +++ Y E P    W+SE  D  + +
Sbjct: 272 KYAIGDEIQGLNSQMIEDYIKYLGNLRAKGLGLGKIYEGYEEEPQSMKWVSEYSDPNQVK 331

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE +V+ Y + + ++ D
Sbjct: 332 TDFFEGKVSAYSKSSVIEDD 351


>gi|47213103|emb|CAF89523.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 407

 Score =  164 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 22/133 (16%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K   Q    ++  A  +E  + 
Sbjct: 283 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHKPSAQTVGAIIRNAVEIEQEFL 335

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    ++Y++FI                 ENPF +M E I L+ + NFF
Sbjct: 336 TEALPVKLIGMNCQLMKRYIEFIYR--------------AENPFDFM-ENISLEGKTNFF 380

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 381 EKRVGEYQRMGVM 393


>gi|255724924|ref|XP_002547391.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           tropicalis MYA-3404]
 gi|240135282|gb|EER34836.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           tropicalis MYA-3404]
          Length = 387

 Score =  164 bits (416), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++   + +       +L  K        ++ EA  +E  Y 
Sbjct: 247 MPGLTFSNELICRDEGIHTDYACLLFS-------YLENKPDPSIIEKIITEAVSIEKKYF 299

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY+++ A+R     G +  +  T NPF +M E I L  + NFF
Sbjct: 300 SDALPVSLLGMNCDLMCQYVEYCADRLLVAFGNDKYYNVT-NPFDFM-ENISLAGKTNFF 357

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   ++
Sbjct: 358 EKRVSDYQRAGVME 371


>gi|300706309|ref|XP_002995432.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
 gi|239604534|gb|EEQ81761.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
          Length = 325

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   +  ++PH            ++ EA  +E  + 
Sbjct: 190 MPGLTFSNELISRDEGLHCDFACLLNQYLINKSPH---------ILDIVKEAVEIEKEFL 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             ++P   +G+N     QY++F+A+R    +GLE  +  T NPF +M E I L  + NFF
Sbjct: 241 GVSLPVNLIGMNCKLMCQYIEFVADRLLINLGLEKYYN-TLNPFDFM-ENISLVGKTNFF 298

Query: 121 ETRVTEYQQG 130
           + R ++YQ+ 
Sbjct: 299 DKRESQYQKA 308


>gi|296116311|ref|ZP_06834927.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977130|gb|EFG83892.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 334

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+ +   + +RDE+LH      +      ENP +WT++ Q   R +  +    E A+ 
Sbjct: 193 LKGMGQIVSWSVRDETLHCVSMARLFRVFVQENPEIWTQKLQDDIRQICRDIVEHEDAFI 252

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             +   G   GL+A   ++Y++F+ANRR  Q+GL+ L+    NP PW+ E+++  +  NF
Sbjct: 253 DLSFEMGPVEGLDAAQVKRYIRFVANRRLGQLGLDGLYDVATNPLPWVDEMVNAVEHANF 312

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 313 FENRSTEYSRAAT 325


>gi|297745764|emb|CBI15820.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I R E LH +F   + + ++ + P        QK   ++HEA  +E  + 
Sbjct: 129 MPGLTFSNELISRYEGLHCDFACLLYSLLQKQLPW-------QKVHHIVHEAMEIETQFI 181

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+ A     Y++F+ +R    +G E  +   ENPF WM E I L+   NFF
Sbjct: 182 CEALPCALIGMKATLMSHYIKFVVDRLLVALGYERKYN-VENPFDWM-EFIFLQGNANFF 239

Query: 121 ETRVTEYQQGAGLK 134
           + R+ +YQ+ + + 
Sbjct: 240 QRRMGDYQKASIMS 253


>gi|258648774|ref|ZP_05736243.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           tannerae ATCC 51259]
 gi|260851104|gb|EEX70973.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           tannerae ATCC 51259]
          Length = 350

 Score =  164 bits (415), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     ++ ++K E P ++T +     R M+ +    EI + 
Sbjct: 210 MPGSAQEIRYINRDENTHLWLFRSILLELKKEAPEMFTPDKVDVYRQMIAQGVEEEIKWG 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-E 116
              +     GL +     Y++++ N R   +G +PL+  Y + P    W+S+  +    +
Sbjct: 270 EYVLGDKIEGLTSEMIRDYIKYLGNLRTTSLGFDPLYDGYDKEPPSMSWVSQYSNANMIK 329

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y + + L  D
Sbjct: 330 TDFFEARSTAYAKSSALIDD 349


>gi|1710399|sp|P50649|RIR2_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|349790|gb|AAA29754.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 322

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 11/135 (8%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEA--TLLEIAYA 60
           G+    + I RDE LH +F   + + +  + P        Q  + ++ EA    +E ++ 
Sbjct: 185 GLTFSNELISRDEGLHTDFNCLIYSLLDNKLPE-------QMVQNIVKEAGGVEVEKSFI 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFF
Sbjct: 238 CESLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKIF-HSKNPFNWMD-LISLQGKTNFF 295

Query: 121 ETRVTEYQQGAGLKW 135
           E RV +YQ+   +  
Sbjct: 296 EKRVADYQKSGVMAQ 310


>gi|254442775|ref|ZP_05056251.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
 gi|198257083|gb|EDY81391.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
          Length = 361

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 54/132 (40%), Positives = 82/132 (62%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GI E ++Y +RDES H+    ++   +  ENP +WT EF+ + R  + EA  LE  +  +
Sbjct: 223 GIGEMFRYTLRDESNHIELLRNLFMDLIEENPDVWTPEFKAELRDAMSEAIALEKEFIAD 282

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +GL      QY+ +IA+RR    GL+PL     NP PW++E++D+KKE+NFFE 
Sbjct: 283 CLPVDSIGLRKEDFVQYIDYIADRRLEGCGLDPLTPGVTNPLPWLAEMMDIKKEQNFFEG 342

Query: 123 RVTEYQQGAGLK 134
           RVTEYQ+ + L+
Sbjct: 343 RVTEYQKASSLE 354


>gi|157953769|ref|YP_001498660.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
 gi|156068417|gb|ABU44124.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
          Length = 324

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 76/134 (56%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  FG  + ++++ + P        +  + ++ EA   E  + 
Sbjct: 188 MPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPF-------ETVKQIITEAVENEKEFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFF
Sbjct: 241 CDAIPCRLIGMNSELMGQYIEFVADRIFIALGYEKVYN-SKNPFAFM-ELISLQGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   +K
Sbjct: 299 EKRVSDYQRPGVMK 312


>gi|88861512|ref|ZP_01136127.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
 gi|88816487|gb|EAR26327.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
          Length = 219

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +  +   ENP +WT   +++           E A+ 
Sbjct: 78  MKGMGQIVTWSVRDETLHCNSMIRIFKEFIKENPEIWTPTLKKELYEACRIIVEHEDAFI 137

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   + Y++FIANRR  Q+GLEP++   +NP  W+  +++  +  NF
Sbjct: 138 DLAFEMGPMEGLTAQEVKDYIRFIANRRLIQLGLEPIYDVQKNPLTWLDTMLNAVEHMNF 197

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + + 
Sbjct: 198 FEGRATEYSKAST 210


>gi|53713986|ref|YP_099978.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis YCH46]
 gi|52216851|dbj|BAD49444.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           fragilis YCH46]
          Length = 349

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EIA+ 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
              +     GLN      Y+ F+ N R   +G  PL++   + P    W+S+  +    +
Sbjct: 269 QYVIGDQIQGLNRQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVK 328

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 329 TDFFEAKSTAYAKSTALEDD 348


>gi|66822029|ref|XP_644369.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|66823381|ref|XP_645045.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|41019487|sp|P42521|RIR2_DICDI RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|29611978|gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum]
 gi|60472492|gb|EAL70444.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|60472997|gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
          Length = 338

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +  +++        K   +    M+ +A   E  + 
Sbjct: 194 MQGLTFSNELISRDEGLHCDFACLLYTKLQR-------KLDPKVIEKMIRDAVECEKEFI 246

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+ S  QY++F A+R    +G + +F  + NPF WM E+I L+++ NFF
Sbjct: 247 CESLPVDLIGMNSRSMSQYIEFCADRLVVSLGYKKIFN-SSNPFEWM-EMISLQRKSNFF 304

Query: 121 ETRVTEYQQGAG 132
           E +V EY +   
Sbjct: 305 EGKVAEYAKTGV 316


>gi|157825769|ref|YP_001493489.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
 gi|157799727|gb|ABV74981.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
          Length = 327

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++           E A+ 
Sbjct: 178 MKGMGQIISWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFI 237

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NF
Sbjct: 238 ELAFEVGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNF 297

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 298 FENRATEYSKAAT 310


>gi|253567022|ref|ZP_04844473.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_2_5]
 gi|265764336|ref|ZP_06092904.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           2_1_16]
 gi|15290503|gb|AAK92210.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           fragilis 638R]
 gi|251944146|gb|EES84655.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_2_5]
 gi|263256944|gb|EEZ28290.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           2_1_16]
 gi|301163665|emb|CBW23219.1| putative ribonucleoside-diphosphate reductase beta chain
           [Bacteroides fragilis 638R]
          Length = 349

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EIA+ 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
              +     GLN      Y+ F+ N R   +G  PL++   + P    W+S+  +    +
Sbjct: 269 QYVIGDQIQGLNRQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVK 328

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 329 TDFFEAKSTAYAKSTALEDD 348


>gi|152993970|ref|YP_001359691.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurovum sp.
           NBC37-1]
 gi|151425831|dbj|BAF73334.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
          Length = 339

 Score =  164 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN  K E P L+TKE       M  +A  LE  + 
Sbjct: 203 MLGTAQMIRFIQRDEVTHLLLFQNMINATKRERPELFTKELIDDVYQMFRDAVKLECEWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL     EQY+Q++A++R H +GLE ++   E+P  W+         + NF
Sbjct: 263 TYITQGQILGLTNEIIEQYIQYLADKRLHAVGLEKIYN-VEHPIKWVDNFSQFNDQKTNF 321

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 322 FEGNVTNYSKGS 333


>gi|171913278|ref|ZP_02928748.1| ribonucleotide-diphosphate reductase subunit beta [Verrucomicrobium
           spinosum DSM 4136]
          Length = 361

 Score =  164 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 51/132 (38%), Positives = 79/132 (59%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI   ++Y +RDES H+    ++   +  ENP +WT EF+++   ++ EA  LE  +  
Sbjct: 222 PGIGTMFRYTLRDESNHIKVFRNLFMDLIDENPEIWTPEFREELVELMKEAVALEKEFIR 281

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
           + +P   VGL A   E Y+ FIA+RR   +GL  L     NP PW++E+ D++KE+NFFE
Sbjct: 282 DCLPVAAVGLTAGEFELYIDFIADRRLASVGLPALTPGIVNPLPWLAEMQDIRKEQNFFE 341

Query: 122 TRVTEYQQGAGL 133
             VT+YQ+ + L
Sbjct: 342 GTVTDYQKASSL 353


>gi|60682187|ref|YP_212331.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis NCTC 9343]
 gi|60493621|emb|CAH08410.1| putative ribonucleoside-diphosphate reductase beta chain
           [Bacteroides fragilis NCTC 9343]
          Length = 349

 Score =  163 bits (414), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EIA+ 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPELFTPDKVKVYEEMMREGVKQEIAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
              +     GLN      Y+ F+ N R   +G  PL++   + P    W+S+  +    +
Sbjct: 269 QYVIGDQIQGLNRQMISDYIHFLGNLRWSSLGYTPLYEDNRKEPESMHWVSQYSNANMVK 328

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 329 TDFFEAKSTAYAKSTALEDD 348


>gi|254455551|ref|ZP_05068980.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207082553|gb|EDZ59979.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 335

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +  +   ENP +WT + +++           E A+ 
Sbjct: 194 MKGMGQIVTWSVRDETLHCNSMIRIFKEFINENPEIWTPKLKKELYEACRTIIAHEDAFI 253

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   + Y++FI NRR  Q+GLEP++   +NP  W+  +++  +  NF
Sbjct: 254 DLAFEMGPMEGLTAQEVKDYIRFIGNRRLTQLGLEPIYDVDKNPLGWLDTMLNAVEHMNF 313

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + + 
Sbjct: 314 FEGRATEYSKAST 326


>gi|320527966|ref|ZP_08029132.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
 gi|320131592|gb|EFW24156.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
          Length = 349

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDES HL    +++ +++ E P L+T E  Q  R M++     EIA+ 
Sbjct: 209 MPGSVQEIRYINRDESTHLWLFRNILVELQKEEPELFTPENIQMIREMMNTGVEQEIAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-E 116
           H  +     GLN      Y++++ N R   +G   L+ +Y E P    W+ +  D    +
Sbjct: 269 HYVIGDEIPGLNKQMVTDYIKYLGNTRFATLGFGNLYEEYAEEPESMKWVKQYSDANMVK 328

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R + Y +   ++ D
Sbjct: 329 TDFFEARPSAYAKSGAIEDD 348


>gi|257067181|ref|YP_003153437.1| ribonucleotide-diphosphate reductase subunit beta [Anaerococcus
           prevotii DSM 20548]
 gi|256799061|gb|ACV29716.1| Ribonucleoside-diphosphate reductase [Anaerococcus prevotii DSM
           20548]
          Length = 352

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +IN +K E   L+  E Q   R ML E    EIA+ 
Sbjct: 212 MPGTVQEIRYINRDENTHLWLFRSLINDLKKEREDLFVPELQNYYREMLKEGVEQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
             ++     GLN    E Y++++ N R   +GLEPL++  +       W+ E  D    +
Sbjct: 272 KYSIGNSIAGLNEKMIEDYIKYLGNLRAKGLGLEPLYEGYKEIPESMKWVDEYSDPNGVK 331

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE +VT Y + + ++ D
Sbjct: 332 TDFFEAKVTAYSKSSIIEDD 351


>gi|325475472|gb|EGC78653.1| ribonucleoside-diphosphate reductase [Treponema denticola F0402]
          Length = 351

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T +  +  R M+ E    EIA+ 
Sbjct: 211 MPGSVQEIRYINRDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRGMIREGCEQEIAWG 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-E 116
           +  +     GLN+     Y+Q++ N RC  +G  P++  + E P    W+S+  +    +
Sbjct: 271 NYVIGNDIPGLNSQMITDYIQYLGNLRCENLGFAPIYDGHKEEPQSMSWVSQYSNANLIK 330

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + +  D
Sbjct: 331 TDFFEAKSTAYAKSSAMVDD 350


>gi|209966751|ref|YP_002299666.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
           centenum SW]
 gi|209960217|gb|ACJ00854.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodospirillum
           centenum SW]
          Length = 322

 Score =  163 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I +      ENP +WT+ FQ++           E A+ 
Sbjct: 180 MKGMGQIVTWSVRDETLHTLSMIKLFRTFVNENPQVWTEAFQRELTVCCETIVHHEDAFI 239

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+ A   ++Y+++IA+RR  Q+GLEP+++  +NP PWM  +++  +  NF
Sbjct: 240 DLAFEMGPVEGMTAEDVKRYIRWIADRRLGQLGLEPVYRIEKNPLPWMDAILNGIEHTNF 299

Query: 120 FETRVTEYQQGAGL-KWD 136
           FE R TEY + A    WD
Sbjct: 300 FENRATEYSKAATRGTWD 317


>gi|88607783|ref|YP_505152.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           phagocytophilum HZ]
 gi|88598846|gb|ABD44316.1| ribonucleoside-diphosphate reductase, beta subunit [Anaplasma
           phagocytophilum HZ]
          Length = 323

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDESLH +  I + N    EN  +W  + +Q+         +LE  + 
Sbjct: 181 MKGMGQIIAWSARDESLHTDSIIRLFNTFVHENGEIWDDDLKQELYDACKVIVMLEDEFI 240

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                     GL+A   ++Y++FIANRR  Q+ LEP++   ENP PW+ E+++  +  NF
Sbjct: 241 DLAFALGDVEGLSACEVKRYIRFIANRRLKQLHLEPIYDVAENPLPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGAG 132
           FE RVTEY + A 
Sbjct: 301 FENRVTEYARAAT 313


>gi|58700135|ref|ZP_00374651.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58533347|gb|EAL57830.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
          Length = 225

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 1/132 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH N  I + N    EN  +W  EF+++  +       LE  + 
Sbjct: 93  MKGMGQIIAWSARDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFI 152

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                     GL+A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NF
Sbjct: 153 KLAFDLGDVEGLSAEEVRNYIRYVANRRLMQLGLESIYDVNDNPIPWLDEILNGVEHTNF 212

Query: 120 FETRVTEYQQGA 131
           FE RVTEY + A
Sbjct: 213 FENRVTEYSRAA 224


>gi|282849773|ref|ZP_06259157.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
 gi|282580710|gb|EFB86109.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
          Length = 342

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+ 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +GLN    E+Y++++AN R   IGL  L+ +  ENP  W+    +L   + +
Sbjct: 262 QYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKENPMEWIESFSNLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|289449785|ref|YP_003474451.1| ribonucleoside-diphosphate reductase subunit beta [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289184332|gb|ADC90757.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
          Length = 400

 Score =  163 bits (413), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    ++++++++E P L++ E  ++ R M+ E    EIA+ 
Sbjct: 260 MPGSVQEIRYINRDENTHLWLFRNILSELQVERPDLFSAELVEEYRAMIKEGAEQEIAWG 319

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-E 116
           H  +     GL       Y+Q++AN R   +G   ++      P    W+S+  D    +
Sbjct: 320 HYVLGDDIPGLTRQMVTDYIQYLANLRAQNLGFAYIYPDNHSEPASMSWISQYSDANMVK 379

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   +  D
Sbjct: 380 TDFFEAKSTAYAKSTAMIDD 399


>gi|331083185|ref|ZP_08332301.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
 gi|330404574|gb|EGG84114.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
          Length = 347

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I Q+K E P L+TKE  Q  + ML E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDLKK-E 116
           H  +     G++     +Y++++ N R   +G +   P ++       W+S   +    +
Sbjct: 267 HYVLGDDIPGISKEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L  D
Sbjct: 327 TDFFEAKSTAYAKSTALLDD 346


>gi|260589755|ref|ZP_05855668.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
 gi|260539995|gb|EEX20564.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
          Length = 359

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I Q+K E P L+TKE  Q  + ML E    EIA+ 
Sbjct: 219 MPGSAQEIRYINRDENTHLWLFRNMILQLKEEEPELFTKENIQALKEMLMEGVEQEIAWG 278

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDLKK-E 116
           H  +     G++     +Y++++ N R   +G +   P ++       W+S   +    +
Sbjct: 279 HYVLGDDIPGISKEMITEYIKYLGNLRFTGLGFDVVYPGYEKEPESMKWVSYYSNANMVK 338

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L  D
Sbjct: 339 TDFFEAKSTAYAKSTALLDD 358


>gi|313894221|ref|ZP_07827786.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
 gi|313441045|gb|EFR59472.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
          Length = 342

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I +++ E P L+T E ++K   M+ + T  EIA+ 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEEKITDMIRQGTENEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +GLN    E+Y++++AN R   IGL  L+ +  +NP  W+    +L   + +
Sbjct: 262 QYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|99036000|ref|ZP_01315041.1| hypothetical protein Wendoof_01000112 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 329

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH N  I + N    EN  +W  EF+++  +       LE  + 
Sbjct: 181 MKGMGQIIAWSARDETLHTNSIIMLFNTFIKENNEIWDNEFKEELYSACRTIVELEDEFI 240

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                     GL+A     Y++++ANRR  Q+GLE ++   +NP PW+ E+++  +  NF
Sbjct: 241 KLAFDLGDVEGLSAEEVRNYIRYVANRRLMQLGLESIYDVNDNPTPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGAG 132
           FE RVTEY + A 
Sbjct: 301 FENRVTEYSRAAT 313


>gi|256545921|ref|ZP_05473276.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398343|gb|EEU11965.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
          Length = 352

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 75/140 (53%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +IN +K E P L+T E ++   ++L E    EIA+ 
Sbjct: 212 MPGTVQEIRYINRDENTHLWLFRSMINDLKEERPDLFTDELKEFYLSLLKEGVEQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-E 116
              +     GLN+   E Y++++ N R   +GL  +++  E+      W+SE  D  + +
Sbjct: 272 KYAIGDEIQGLNSQMIEDYIKYLGNLRAKGLGLGTIYEGYEDEPQSMKWVSEYSDPNQVK 331

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE +V+ Y + + ++ D
Sbjct: 332 TDFFEGKVSAYSKSSVIEDD 351


>gi|150015087|ref|YP_001307341.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           beijerinckii NCIMB 8052]
 gi|149901552|gb|ABR32385.1| Ribonucleoside-diphosphate reductase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 344

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ ENP L+T+E + + R M+      EI + 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNIIKELQNENPELFTEEVKNELRNMMKIGVEQEILWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKN 118
           H  +     G+N    E Y++++ N+R  +I L PLF +  +NP  W+  + +    + +
Sbjct: 266 HYVIGDKIQGINKQLIENYIKYLGNKRLKEINLSPLFKEQDKNPASWVDTLSNANSVKTD 325

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE R T Y +   L  D
Sbjct: 326 FFEARSTAYAKVTTLIDD 343


>gi|162147608|ref|YP_001602069.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542240|ref|YP_002274469.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786185|emb|CAP55767.1| putative ribonucleotide reductase small subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529917|gb|ACI49854.1| Ribonucleoside-diphosphate reductase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 353

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+ +   + +RDE+LH      +      ENP +WT   +     +  +    E A+ 
Sbjct: 202 LKGMGQIVSWSVRDETLHCLSMARLFRVFIQENPEIWTDALRADIVQICRDIVEHEDAFI 261

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL+    + Y++FIA+RR + +GL+ ++    NP PW+ ++++  +  NF
Sbjct: 262 DLCFEMGPVEGLDGDLVKTYIRFIADRRLNLLGLDGIYDVPSNPLPWVDDMLNAVEHTNF 321

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + + 
Sbjct: 322 FENRSTEYSRAST 334


>gi|227485717|ref|ZP_03916033.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
 gi|227236272|gb|EEI86287.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
          Length = 352

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +IN +K E P L+T E     R ML E    EI + 
Sbjct: 212 MPGTVQEIRYINRDENTHLWLFRSLINDLKKERPDLFTPEATIVYRDMLKEGVRQEIEWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
              +     GL+    E Y++++ N R   +G +PLF+ YTE P    W+ E  D  + +
Sbjct: 272 KYAIGDNIAGLSTTMIEDYIKYLGNLRAKGLGFDPLFEGYTEIPQSMKWVDEYSDPNRVK 331

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE +VT Y + + ++ D
Sbjct: 332 TDFFEAKVTAYSKSSIIEDD 351


>gi|269798663|ref|YP_003312563.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294792661|ref|ZP_06757808.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
 gi|269095292|gb|ACZ25283.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294456560|gb|EFG24923.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
          Length = 342

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+ 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +GLN    E+Y++++AN R   IGL  L+ +  +NP  W+    +L   + +
Sbjct: 262 QYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|253827828|ref|ZP_04870713.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313142391|ref|ZP_07804584.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
 gi|253511234|gb|EES89893.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313131422|gb|EFR49039.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 341

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 74/132 (56%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN +K E+P L+TK+ +++   M  EA  +E A+ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL +   ++Y++++A+ R  +IGL  L+   ++P  W+       + + NF
Sbjct: 265 EYITQGQILGLTSEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNF 323

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 324 FEGNVTNYAKGS 335


>gi|303228685|ref|ZP_07315510.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
 gi|303230495|ref|ZP_07317254.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302514861|gb|EFL56844.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302516665|gb|EFL58582.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
          Length = 342

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+ 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +GLN    E+Y++++AN R   IGL  L+ +  +NP  W+    +L   + +
Sbjct: 262 QYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|210631890|ref|ZP_03297102.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
 gi|210159815|gb|EEA90786.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
          Length = 352

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T E  +  R ML E    EIA+ 
Sbjct: 212 MPGSAQEIRYINRDENTHLWLFRNIILELQKEEPQLFTSENVEMLRQMLEEGVRQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
              +     GL     E Y++++ N R   +G   L++ Y   P    W+S+  +    +
Sbjct: 272 RYVLGDAIPGLTGDMVEGYIKYLGNLRWSSLGFGQLYEGYRSEPEDMAWVSQYSNANMVK 331

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L  D
Sbjct: 332 TDFFEAKSTAYAKSTALVDD 351


>gi|224418874|ref|ZP_03656880.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 340

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 74/132 (56%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN +K E+P L+TK+ +++   M  EA  +E A+ 
Sbjct: 204 MLGSAQMIRFIQRDEVTHLILFQNMINSVKKESPELFTKDLEEEVIEMFREAVKVETAWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL +   ++Y++++A+ R  +IGL  L+   ++P  W+       + + NF
Sbjct: 264 EYITQGQILGLTSEIIQEYIKYLADERLRRIGLPTLYN-AKHPIKWVDSFSSFNEQKTNF 322

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 323 FEGNVTNYAKGS 334


>gi|78776214|ref|YP_392529.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurimonas
           denitrificans DSM 1251]
 gi|78496754|gb|ABB43294.1| Ribonucleoside-diphosphate reductase [Sulfurimonas denitrificans
           DSM 1251]
          Length = 340

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+ ++ +++   M  EA  LE+A+ 
Sbjct: 203 MLGSAQMIRFIQRDEVTHLVLFQNLINSLRKERPDLFNEKLKEEVIEMFKEAVALEVAWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL     EQY+Q++A+ R   +G   L+  T NP  W+ +       + NF
Sbjct: 263 KYITGGQILGLTDAIIEQYIQYLADDRLTSVGFAKLYNVT-NPIKWVDDFSKFNDQKTNF 321

Query: 120 FETRVTEYQQGAGLKWD 136
           FE  V  Y +G+    D
Sbjct: 322 FEGTVANYSKGSLTFDD 338


>gi|209170936|ref|YP_002268082.1| agip52 [Agrotis ipsilon multiple nucleopolyhedrovirus]
 gi|208436527|gb|ACI28754.1| ribonucleotide reductase-2B [Agrotis ipsilon multiple
           nucleopolyhedrovirus]
          Length = 313

 Score =  162 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 8/135 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F          E      K       +M  EA  +E  + 
Sbjct: 179 MPGLTFSNELISRDEGLHTDFACLYYKTRVTE------KLDSDTILSMFKEAVAIEKEFF 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+NA S  +Y++F+A+R   Q+G    F    NPF +M+  I L+ + NFF
Sbjct: 233 TAALPVELLGMNAQSMCEYIEFVADRLLVQLGQPKYFN-ARNPFEFMN-NISLEGKTNFF 290

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EY++    + 
Sbjct: 291 EKRVGEYKRFGAGED 305


>gi|238018468|ref|ZP_04598894.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
 gi|237864939|gb|EEP66229.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
          Length = 342

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I +++ E P L+T E + K   M+ +    EIA+ 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGAENEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +GLN    E+Y++++AN R   IGL  L+ +  +NP  W+    +L   + +
Sbjct: 262 QYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|330837704|ref|YP_004412345.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
 gi|329749607|gb|AEC02963.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
          Length = 360

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     ++ +++ E P ++T     + R M+ +    EIA+ 
Sbjct: 220 MPGSVQEIRYINRDETTHLWLFRSILREMQKEEPAMFTPNLVDEYRAMIKQGADQEIAWG 279

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
           H  +    VGLN      Y+Q++ N RC  +G +P+++ + + P    W+ +  +    +
Sbjct: 280 HYVIGDDIVGLNKDMVTDYIQYLGNLRCTDLGFQPIYEGHDKEPETMKWVGQYSNANLIK 339

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y +   L  D
Sbjct: 340 TDFFEARNTAYAKSTSLLDD 359


>gi|150005609|ref|YP_001300353.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           vulgatus ATCC 8482]
 gi|254884474|ref|ZP_05257184.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294778581|ref|ZP_06744003.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|319640834|ref|ZP_07995547.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
 gi|149934033|gb|ABR40731.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           vulgatus ATCC 8482]
 gi|254837267|gb|EET17576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294447530|gb|EFG16108.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|317387646|gb|EFV68512.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
          Length = 349

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI + 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-E 116
              +     GLN    E Y+Q++ N R   +G  PL++   + P    W+S+  +    +
Sbjct: 269 QYVIGDNIQGLNRKMIEDYIQYLGNLRWSSLGFGPLYEENHKEPESMHWVSQYSNANMVK 328

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 329 TDFFEAKSTAYAKSTALEDD 348


>gi|314055235|ref|YP_004063573.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
 gi|313575126|emb|CBI70139.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
          Length = 408

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 12/136 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F +++   ++        +   +    ++ EA  +E  + 
Sbjct: 275 MPGLCFSNELISRDEGLHQEFAVELFKTLR-------NRPTTETIHAIVKEAVEIEKGFI 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++++++R   Q+G+ P++   +NPF +M E I L  + NFF
Sbjct: 328 LDALPCNLIGMNSEKMSEYIEYVSDRLLKQVGVPPIWN-AKNPFDFM-ENISLDGKTNFF 385

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV +Y +   L  D
Sbjct: 386 EKRVGDYGK---LDDD 398


>gi|165969130|ref|YP_001651030.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
 gi|164663626|gb|ABY65846.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
          Length = 339

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 6/132 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH NF     N+   E   + + E       M  EA  +E  + 
Sbjct: 203 MPGLTFSNELISRDEGLHTNFACLYYNEYIDERDKMSSAE----ILDMFVEAVNIEKEFF 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N+ +  +Y++F+A+R   ++     F  T NPF +M+  I L+ + NFF
Sbjct: 259 TSALPCDLLGMNSRAMCEYIEFVADRLLTELQQPKHFN-TPNPFNFMN-NISLEGKTNFF 316

Query: 121 ETRVTEYQQGAG 132
           E RV EY++   
Sbjct: 317 ERRVGEYKRFGA 328


>gi|224539244|ref|ZP_03679783.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519126|gb|EEF88231.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 349

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P L+T +  Q    M+ E    EI + 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRSIILELKKEEPELFTPDKVQIYENMMREGVKQEIEWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENP--FPWMSEVIDLKK-E 116
              +     GLN      Y+ ++ N R   +G  PL+++  + P    W+ +  +    +
Sbjct: 269 QYVIGDNIQGLNRQMIADYIHYLGNLRWSSLGNPPLYEHNRKEPESMHWVLQYSNANMVK 328

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 329 TDFFEAKSTAYAKSTALEDD 348


>gi|294794440|ref|ZP_06759576.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
 gi|294454770|gb|EFG23143.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
          Length = 342

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I +++ E P L+T E + K   M+ + T  EIA+ 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIRELRRERPDLFTPELEAKITDMIRQGTENEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +GLN    E+Y++++AN R   IGL  L+ +  +NP  W+    +L   + +
Sbjct: 262 QYITDDKILGLNNVLIERYIKYLANIRLEAIGLPHLYPEIKDNPMEWIESFSNLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|269866693|ref|XP_002652360.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062665|gb|EED41696.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 211

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I  +               ++ EA  +E  + 
Sbjct: 77  MPGLTFSNELISRDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFL 127

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 128 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 185

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 186 ERREANYQKG 195


>gi|325478871|gb|EGC81981.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 352

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +IN ++ E   L+TKE ++  R ML E    EIA+ 
Sbjct: 212 MPGTVQEIRYINRDENTHLWLFRSLINDLRKEREDLFTKEHKEYYRNMLKEGVEQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
              +     GL+    E Y++++ N R   +GLE L++ YTE P    W+ E  D    +
Sbjct: 272 KYAIGDNIAGLSEKMIEDYIKYLGNLRAKGLGLEALYEGYTEIPDSMKWVDEYSDPNAVK 331

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE +VT Y + + ++ D
Sbjct: 332 TDFFEAKVTAYSKSSIIEDD 351


>gi|155370982|ref|YP_001426516.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
 gi|155124302|gb|ABT16169.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
          Length = 325

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  FG  + +++         K      ++++ EA   E  + 
Sbjct: 189 MPGLGLSNEFISRDEGLHQQFGELLYSKL-------ENKLSLDVVKSIVEEAVANEKDFI 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R    +G    F   ENPF +M E+I L+ + NFF
Sbjct: 242 CDAIPCRMIGMNSDLMSQYIEFVADRIFTALGYPKQF-GAENPFDFM-ELISLEGKSNFF 299

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV+EYQ+   +  D
Sbjct: 300 ERRVSEYQKAGVMNAD 315


>gi|317472120|ref|ZP_07931452.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
 gi|316900524|gb|EFV22506.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
          Length = 347

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ ++K E P L+  +     R M+ +    EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
           H  +     GL     E+Y++++ N RC  +G EP++  +E       W+S+  +    +
Sbjct: 267 HYVIGDEIQGLKKEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + L  D
Sbjct: 327 TDFFEAKSTAYAKSSALVDD 346


>gi|227498392|ref|ZP_03928542.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
 gi|226903854|gb|EEH89772.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
          Length = 342

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    +++ +++ E P L+TKE       M+ +    EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLILFQNILRELRHERPDLFTKEQDAHIADMIRQGAENEIKWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKN 118
                   +GLN    E+Y++++AN R   IGL PL+ + ++NP  W+    +L   + +
Sbjct: 262 QYITDDKILGLNNGLIEKYIKYLANIRLEAIGLAPLYPEISQNPMEWIESFSNLNGTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|154250961|ref|YP_001411785.1| ribonucleotide-diphosphate reductase subunit beta [Parvibaculum
           lavamentivorans DS-1]
 gi|154154911|gb|ABS62128.1| Ribonucleoside-diphosphate reductase [Parvibaculum lavamentivorans
           DS-1]
          Length = 319

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH    + +      ENP +WT+E ++            E A+ 
Sbjct: 178 MKGMGQIVTWSARDETLHTVSAMKLFRTFVDENPEIWTEELRRDIYKACETIIHHEDAFI 237

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL+A   + Y+++IA+RR  Q+ L+P+++  +NP PWM E+++  +  NF
Sbjct: 238 DLAFEMGSIEGLSAQEVKNYIRYIADRRLVQLNLQPIYRTEKNPLPWMDEMLNGIEHTNF 297

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + + 
Sbjct: 298 FENRATEYSKAST 310


>gi|282174133|ref|YP_003358235.1| ORF96 [Anguillid herpesvirus 1]
 gi|281308976|gb|ADA57859.1| ORF96 [Anguillid herpesvirus 1]
          Length = 328

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH +F   +         H+  K   ++   ++ EA  +E  + 
Sbjct: 190 MPGLIMSNEFISRDEGLHCDFACLLFK------DHILGKPGYERVSQIVTEAVEIEKEFL 243

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N      Y++F+A+R    +G    + + +NPF +M E I ++ + NFF
Sbjct: 244 SEALPVRLLGINCEQMCSYIEFVADRLLAALGFPKRY-HVKNPFGFM-ESISMEGKTNFF 301

Query: 121 ETRVTEYQQGAGLKWD 136
           E  V++Y++      D
Sbjct: 302 EKNVSQYKKFTFSDKD 317


>gi|239947951|ref|ZP_04699704.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922227|gb|EER22251.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 327

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +     IENP +WT+  +++           E A+ 
Sbjct: 178 MKGMGQIIAWSVRDETLHTNSIITLFKTFVIENPEVWTETLRKRIYEACTTIVHFEDAFI 237

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NF
Sbjct: 238 ELAFEVGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNF 297

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 298 FENRATEYSKAAT 310


>gi|212693366|ref|ZP_03301494.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|237710423|ref|ZP_04540904.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
 gi|237726931|ref|ZP_04557412.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           D4]
 gi|212664010|gb|EEB24584.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|229433787|gb|EEO43864.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           dorei 5_1_36/D4]
 gi|229455145|gb|EEO60866.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
          Length = 349

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI + 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-E 116
              +     GLN    E Y+Q++ N R   +G  PL++   + P    W+S+  +    +
Sbjct: 269 QYVIGDNIQGLNRKMIEDYIQYLGNLRWSSLGFGPLYEENHKEPESMHWVSQYSNANMVK 328

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 329 TDFFEAKSTAYAKSTALEDD 348


>gi|114327552|ref|YP_744709.1| ribonucleotide-diphosphate reductase subunit beta [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315726|gb|ABI61786.1| ribonucleoside-diphosphate reductase beta chain [Granulibacter
           bethesdensis CGDNIH1]
          Length = 339

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+ +   + +RDE+LH    I + +    EN  +WT++ +Q+ R +       E A+ 
Sbjct: 198 LKGMGQIVSWSVRDETLHCLSIIKLFHVFIDENREIWTEDLRQEIRQICATIVEHEDAFI 257

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL+A   + Y+++IA+RR  Q+GLEPLF    NP PW+ ++++  +  NF
Sbjct: 258 DLAFELGSVEGLDAAQVKSYIRYIADRRLIQLGLEPLFHVERNPLPWIDDMLNAVEHANF 317

Query: 120 FETRVTEYQQGAGL-KWD 136
           FE R TEY + + +  W+
Sbjct: 318 FENRATEYSRASTVGTWE 335


>gi|308485547|ref|XP_003104972.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
 gi|308257293|gb|EFP01246.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
          Length = 323

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 9/135 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I RDE LH +F   +  +I         K  ++    ++ EA  +E+ + 
Sbjct: 186 LPGLTHSNELISRDEGLHRDFACLLFTKI-------VDKPSREIVCEIVDEAVTIELEFL 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N     QY++++A+    ++G E L+ +T NPF +M E I +  + NFF
Sbjct: 239 DQALPVNVIGMNYTLMSQYIKYVADHLLEELGFEKLY-HTINPFDFM-ENISIDGKTNFF 296

Query: 121 ETRVTEYQQGAGLKW 135
           E RV+EYQ+   +  
Sbjct: 297 EKRVSEYQRSGVMAD 311


>gi|255008714|ref|ZP_05280840.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
 gi|313146449|ref|ZP_07808642.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
 gi|313135216|gb|EFR52576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
          Length = 349

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI + 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPELFTSDRVKVYEAMMREGVKQEIEWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-E 116
              +     GLN    E Y+ ++ N R   +G  PL++   + P    W+S+  +    +
Sbjct: 269 QYVIGDEIQGLNKKMIEDYIHYLGNLRWTSLGFTPLYEDNLKEPESMRWVSQYSNANMVK 328

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 329 TDFFEAKSTAYAKSTALEDD 348


>gi|297157411|gb|ADI07123.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
           BCW-1]
          Length = 340

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 45/136 (33%), Positives = 81/136 (59%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF   V++ ++ E P L+  E QQ+   ML EA   E+ +A +
Sbjct: 204 GLATGTNWVFRDETMHMNFAFQVVDTVREEEPELFDDELQQQVTDMLREAVEAELQFARD 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+ ++++  NFFE 
Sbjct: 264 LCGEGLPGMNTESMRQYLECVADQRLARLGFAPVY-GSENPFSFM-ELQNVQELTNFFER 321

Query: 123 RVTEYQQG--AGLKWD 136
           R + YQ      + +D
Sbjct: 322 RASAYQVAVEGSVSFD 337


>gi|226950223|ref|YP_002805314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
 gi|226843961|gb|ACO86627.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
          Length = 342

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K ENPH++T+E +++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIKELKNENPHIFTEELEEEFRQMMRIGVEHEIQWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +GLN    E+Y+++++N R   IGL+PL+ +  ++P  W+     L   + +
Sbjct: 262 QYVTNNEILGLNDELIEKYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|223983469|ref|ZP_03633655.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
 gi|223964641|gb|EEF68967.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
          Length = 348

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T E +Q  R ML +    EI + 
Sbjct: 208 MPGSVQEIRYINRDENTHLWLFRSMILELRKEEPQLFTPEREQLYREMLKQGVEEEIEWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-E 116
              +     GLN      Y++++ N R   I LE L+   E       W+S+  +    +
Sbjct: 268 CAILGDEIPGLNKTMIRDYIRYLGNLRAKAIHLEILYPGEEEEPASMKWVSQYANANLIK 327

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R + Y + + LK D
Sbjct: 328 TDFFEARSSAYAKASALKDD 347


>gi|237752265|ref|ZP_04582745.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376507|gb|EEO26598.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 343

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E PHL+TK+  ++   M  EA  +E  + 
Sbjct: 207 MLGSAQMIRFIQRDEVTHLLLFQNMINSLRKEMPHLFTKDLIEEVLEMFREAVRVESTWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL +    +Y++++A+ R  ++GL  L+    +P  W+       + + NF
Sbjct: 267 EYITQGQILGLTSEIIHEYIRYLADNRLTRVGLPALYN-ARHPIKWVDSFSSFNEQKTNF 325

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 326 FEGNVTNYAKGS 337


>gi|67459102|ref|YP_246726.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia felis
           URRWXCal2]
 gi|67004635|gb|AAY61561.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia felis
           URRWXCal2]
          Length = 327

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++           E A+ 
Sbjct: 178 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFI 237

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NF
Sbjct: 238 ELAFEVGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNF 297

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 298 FENRATEYSKAAT 310


>gi|157964544|ref|YP_001499368.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           massiliae MTU5]
 gi|157844320|gb|ABV84821.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           massiliae MTU5]
          Length = 336

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++           E A+ 
Sbjct: 179 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFI 238

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NF
Sbjct: 239 ELAFEVGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNF 298

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 299 FENRATEYSKAAT 311


>gi|90592764|ref|YP_529717.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
 gi|71559214|gb|AAZ38213.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
          Length = 313

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 8/135 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F     N        +  K       +M  EA  +E  + 
Sbjct: 179 MPGLTFSNELISRDEGLHTDFACLYYNT------RVHDKLAPDTVLSMFKEAVAIEKEFF 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+NA S   Y++F+A+R   Q+     F +  NPF +M+  I L+ + NFF
Sbjct: 233 TAALPAALLGMNAQSMCDYIEFVADRLLVQLHQPKHF-HARNPFEFMN-NISLEGKTNFF 290

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EY++      
Sbjct: 291 EKRVGEYKRFGAGDD 305


>gi|269865627|ref|XP_002651990.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063361|gb|EED42066.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 290

 Score =  161 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I  +               ++ EA  +E  + 
Sbjct: 156 MPGLTFSNELISRDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFL 206

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 207 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 264

Query: 121 ETRVTEYQQG 130
           E R T YQ+G
Sbjct: 265 ERRETNYQKG 274


>gi|313768358|ref|YP_004062038.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
 gi|312599054|gb|ADQ91078.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
          Length = 388

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 71/136 (52%), Gaps = 12/136 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F +++   ++        K   +   +++ EA  +E  + 
Sbjct: 255 MPGLCFSNELISRDEGLHQEFAVELFKLLR-------NKPSTETIHSIVKEAVEIEKNFI 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++++++R   Q+G  P++  ++NPF +M E I L  + NFF
Sbjct: 308 LDALPCNLIGMNSEKMSEYIEYVSDRLLKQVGQPPIWN-SKNPFDFM-ENISLDGKTNFF 365

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV +Y +   L  D
Sbjct: 366 EKRVGDYGK---LDDD 378


>gi|303237757|ref|ZP_07324316.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           disiens FB035-09AN]
 gi|302482043|gb|EFL45079.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           disiens FB035-09AN]
          Length = 349

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T E       M+ E    EIA+ 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIIVELKQEQPELFTPERIAVYEEMMREGVRQEIAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-E 116
              +     GL       Y+ ++ N R   +G   L+++ +N      W+++  +  K +
Sbjct: 269 QYVIGDKVQGLTQQMVADYIHYLGNLRWRSLGFGNLYEHNQNEPDDMQWVAQYSNANKVK 328

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L  D
Sbjct: 329 TDFFEAKSTAYAKSTALIDD 348


>gi|225164890|ref|ZP_03727109.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
 gi|224800504|gb|EEG18881.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
          Length = 362

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 51/133 (38%), Positives = 82/133 (61%), Gaps = 1/133 (0%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI + ++Y +RDES H+    +++  +  ENP +WT  F+++ R  + EA  LE  +  
Sbjct: 222 PGIGQMFRYTLRDESNHIEVFRNLLMDLVEENPEIWTPGFKEELRETMREAVTLEKEFIR 281

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNFF 120
           + +P   VGL       Y+ +IA+RR   +GL P+     +NP PW++E++D+KKE+NFF
Sbjct: 282 DCLPVNAVGLAVDEFLTYIDYIADRRLEGVGLAPISATPIKNPLPWLAEMMDIKKEQNFF 341

Query: 121 ETRVTEYQQGAGL 133
           E RVTEYQ+ + L
Sbjct: 342 EGRVTEYQKASSL 354


>gi|34482564|emb|CAE09564.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Wolinella
           succinogenes]
          Length = 283

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN +K E P L+TK  +++   M  +A  +E A+ 
Sbjct: 147 MLGSAQMIRFIQRDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWG 206

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL +    +Y+Q++A+ R  ++G+  L+   ++P  W+ +     + + NF
Sbjct: 207 DYITQGQILGLTSEIIHEYIQYLADDRLKRVGMPILYN-AKHPIKWVDQFSSFNEQKTNF 265

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 266 FEGNVTNYAKGS 277


>gi|42525851|ref|NP_970949.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           denticola ATCC 35405]
 gi|41815901|gb|AAS10830.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           denticola ATCC 35405]
          Length = 351

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T +  +  R M+ E    EIA+ 
Sbjct: 211 MPGSVQEIRYINRDENTHLWLFRSMIQELQKEEPQLFTPQNVELFRAMIKEGCEQEIAWG 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-E 116
              +     GLN+     Y+Q++ N RC  +G  P++  + E P    W S+  +    +
Sbjct: 271 DYVIGNDIPGLNSQMITDYIQYLGNLRCENLGFAPIYDGHREEPQSMSWASQYSNANLIK 330

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + +  D
Sbjct: 331 TDFFEAKSTAYAKSSAMVDD 350


>gi|31322342|gb|AAP15464.1| ribonucleotide reductase small subunit [Rickettsia rickettsii str.
           'Sheila Smith']
          Length = 336

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++           E A+ 
Sbjct: 186 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFI 245

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NF
Sbjct: 246 ELAFEVGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNF 305

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 306 FENRTTEYSKAAT 318


>gi|330941350|gb|EGH44202.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 109

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 66/109 (60%), Positives = 82/109 (75%)

Query: 28  QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRR 87
           QIKIENPHLW  E ++++  M+ + T LEI YA +TMP+G +G+NA   E Y++FIANRR
Sbjct: 1   QIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRR 60

Query: 88  CHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGLKWD 136
             QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G  L WD
Sbjct: 61  LSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD 109


>gi|167748341|ref|ZP_02420468.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
 gi|167652333|gb|EDR96462.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
          Length = 358

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ ++K E P L+  +     R M+ +    EI + 
Sbjct: 218 MPGSVQEIRYINRDENTHLWLFKNILLELKKEEPSLFHPDCINDYRRMIKKGCEQEIRWG 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
           H  +     GL     E+Y++++ N RC  +G EP++  +E       W+S+  +    +
Sbjct: 278 HYVIGDEIQGLKKEMVEEYIRYLGNLRCQNLGFEPIYPGSETEPESMSWVSQFSNANMIK 337

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + L  D
Sbjct: 338 TDFFEAKSTAYAKSSALVDD 357


>gi|15604372|ref|NP_220888.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           prowazekii str. Madrid E]
 gi|51473694|ref|YP_067451.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia typhi
           str. Wilmington]
 gi|3861064|emb|CAA14964.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (nrdB) [Rickettsia
           prowazekii]
 gi|51460006|gb|AAU03969.1| Ribonucleotide reductase [Rickettsia typhi str. Wilmington]
 gi|292572126|gb|ADE30041.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           prowazekii Rp22]
          Length = 324

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++           E A+ 
Sbjct: 178 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFI 237

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NF
Sbjct: 238 ELAFEVGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNF 297

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 298 FENRATEYSKAAT 310


>gi|269865926|ref|XP_002652096.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063168|gb|EED41960.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 330

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I  +               ++ EA  +E  + 
Sbjct: 207 MPGLTFSNELISRDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 258 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 315

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 316 ERREANYQKG 325


>gi|56416698|ref|YP_153772.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. St. Maries]
 gi|254994906|ref|ZP_05277096.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Mississippi]
 gi|255003042|ref|ZP_05278006.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Puerto Rico]
 gi|255004164|ref|ZP_05278965.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Virginia]
 gi|56387930|gb|AAV86517.1| ribonuceoside-diphosphate reductase beta chain [Anaplasma marginale
           str. St. Maries]
          Length = 324

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH    I + N    EN  +W +  +++          LE  + 
Sbjct: 181 MKGMGQIIAWSARDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFI 240

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                     GL+A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NF
Sbjct: 241 DLAFALGDVEGLSAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGAGL-KWD 136
           FE RVTEY + A    WD
Sbjct: 301 FENRVTEYSRAATEGTWD 318


>gi|215401441|ref|YP_002332744.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
 gi|209483982|gb|ACI47415.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
          Length = 313

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 8/135 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH NF     N    +   + T         M  EA  +E+ + 
Sbjct: 179 MPGLTFSNELISRDEGLHTNFACLYYNTRVDQKLDVPT------VSDMFAEAVAIEMEFF 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P+  VG+NA    +Y++F+A+R   Q+    ++ +TENPF +M+  I L+ + NFF
Sbjct: 233 AEALPESLVGMNAEMMRKYIEFVADRLLVQLKYPKIY-HTENPFEFMN-NISLEGKTNFF 290

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EY++    + 
Sbjct: 291 EKRVGEYKRFGAGED 305


>gi|322510876|gb|ADX06189.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 2]
          Length = 324

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 76/128 (59%), Gaps = 9/128 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE+LH  F + + N+++        K  ++K R ++ EA  +E  + 
Sbjct: 189 MPGLTFSNELISRDEALHTEFAVYLYNRLEK-------KLNKKKVREIIEEAVTIEKEFI 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    QY++F+A+R   Q+G + ++  T NPF +M E+I L+++ NFF
Sbjct: 242 VDALPCRMIGMNSELMTQYIEFVADRLMMQLGCDVIY-ATNNPFDFM-ELISLEQKTNFF 299

Query: 121 ETRVTEYQ 128
           E+RV+EY 
Sbjct: 300 ESRVSEYS 307


>gi|15892574|ref|NP_360288.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           conorii str. Malish 7]
 gi|34580440|ref|ZP_00141920.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157828524|ref|YP_001494766.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165933242|ref|YP_001650031.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. Iowa]
 gi|229586746|ref|YP_002845247.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           africae ESF-5]
 gi|238650260|ref|YP_002916112.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
 gi|15619738|gb|AAL03189.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia conorii
           str. Malish 7]
 gi|28261825|gb|EAA25329.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157801005|gb|ABV76258.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165908329|gb|ABY72625.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           rickettsii str. Iowa]
 gi|228021796|gb|ACP53504.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia africae
           ESF-5]
 gi|238624358|gb|ACR47064.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
          Length = 328

 Score =  160 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++           E A+ 
Sbjct: 178 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYEACTTIVHFEDAFI 237

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NF
Sbjct: 238 ELAFEVGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNF 297

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 298 FENRTTEYSKAAT 310


>gi|269864946|ref|XP_002651751.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269865852|ref|XP_002652068.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269866233|ref|XP_002652201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062966|gb|EED41855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063214|gb|EED41988.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063944|gb|EED42305.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 226

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I  +               ++ EA  +E  + 
Sbjct: 92  MPGLTFSNELISRDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFL 142

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 143 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 200

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 201 ERREANYQKG 210


>gi|161760549|ref|NP_906664.2| ribonucleotide-diphosphate reductase subunit beta [Wolinella
           succinogenes DSM 1740]
          Length = 341

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN +K E P L+TK  +++   M  +A  +E A+ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLLIFQNMINALKKERPDLFTKSLEEEVVEMFRKAVAVESAWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL +    +Y+Q++A+ R  ++G+  L+   ++P  W+ +     + + NF
Sbjct: 265 DYITQGQILGLTSEIIHEYIQYLADDRLKRVGMPILYN-AKHPIKWVDQFSSFNEQKTNF 323

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 324 FEGNVTNYAKGS 335


>gi|313844096|ref|YP_004061759.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
 gi|312599481|gb|ADQ91503.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
          Length = 408

 Score =  160 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 37/129 (28%), Positives = 71/129 (55%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F +++   ++I       K   +   +++ EA  +E  + 
Sbjct: 275 MPGLCFSNELISRDEGLHQEFAVELFKLLRI-------KPTTETIHSIVKEAVEIEKGFI 327

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++++++R   QIG+ P++  ++NPF +M E I L  + NFF
Sbjct: 328 LDALPCALIGMNSEKMSEYIEYVSDRLLKQIGVPPIWN-SKNPFDFM-ENISLDGKTNFF 385

Query: 121 ETRVTEYQQ 129
           E RV +Y +
Sbjct: 386 EKRVGDYGK 394


>gi|47208564|emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 352

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 37/162 (22%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI--- 57
           M G+    + I RDE LH  F   + + +         K  + + + ++ +A  +E    
Sbjct: 187 MPGLTYSNELISRDEGLHCTFACLLYSYLVK-------KPSEDRVKDIITKAVSIEQVGG 239

Query: 58  -------------------------AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIG 92
                                     +  E +P   +G+N    +QY++F+A+R    +G
Sbjct: 240 SYRSMDGNKPNREVLIKDATCFCLQEFLTEALPVDLIGMNRCLMKQYIEFVADRLFADLG 299

Query: 93  LEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGLK 134
           L  ++   ENPF +M E I L+ + NFFE RV EYQ+   + 
Sbjct: 300 LAKMYN-AENPFDFM-EAISLEGKTNFFEKRVAEYQRFGIMS 339


>gi|325831705|ref|ZP_08164922.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
 gi|325486576|gb|EGC89025.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
          Length = 347

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ ++K E P L+T E  ++ R M+ E    EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRNILLELKEEEPELFTPELVEEYRAMIKEGCEQEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
           H  +     GLN      Y+Q++ N RC Q+G EPL++  E       W+S+  +    +
Sbjct: 267 HYAIGDEVAGLNKQMVTDYIQYLGNLRCTQLGFEPLYEGHEREPESMSWVSQFSNANMIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y + + L  D
Sbjct: 327 TDFFEARSTAYAKSSALVDD 346


>gi|222475064|ref|YP_002563479.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
 gi|222419200|gb|ACM49223.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
          Length = 343

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH    I + N    EN  +W +  +++          LE  + 
Sbjct: 200 MKGMGQIIAWSARDETLHTESIIRLFNTFIHENQEIWDENLREELYGACRVIVSLEDEFI 259

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                     GL+A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NF
Sbjct: 260 DLAFALGDVEGLSAAEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNF 319

Query: 120 FETRVTEYQQGAGL-KWD 136
           FE RVTEY + A    WD
Sbjct: 320 FENRVTEYSRAATEGTWD 337


>gi|227501022|ref|ZP_03931071.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
 gi|227216795|gb|EEI82193.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
          Length = 352

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +IN +K E   L+  E Q   R ML E    EIA+ 
Sbjct: 212 MPGTVQEIRYINRDENTHLWLFRSLINDLKKEREDLFVPELQNYYRNMLKEGVEQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENP--FPWMSEVIDLKK-E 116
              +     GLN    E Y++++ N R   +GLE L++   E P    W+ E  D    +
Sbjct: 272 KYAIGNEIAGLNEKMIEDYIKYLGNLRAKGLGLEALYEGFDEIPESMKWVDEYSDPNGVK 331

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE +VT Y + + ++ D
Sbjct: 332 TDFFEAKVTAYSKSSIIEDD 351


>gi|225386408|ref|ZP_03756172.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
 gi|225047489|gb|EEG57735.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
          Length = 347

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    ++I ++K E P L++ E  +  + M+ E    EIA+ 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLLRNMILELKKEEPQLFSPETVEMLKAMVEEGVEQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
           H  +     GL      +Y++++ N R   +G EPL++ Y E P    W+ +  +    +
Sbjct: 267 HYVIGDRISGLTREMVTEYIRYLGNLRWTSLGFEPLYEGYEEEPESMKWVGQYSNANMVK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L  D
Sbjct: 327 TDFFEAKSTAYAKSTALVDD 346


>gi|265756566|ref|ZP_06090772.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
 gi|263233754|gb|EEZ19369.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
          Length = 349

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T +  +    M+ E    EI + 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNIILELKKEEPDLFTPDKVKIYEYMMREGVKQEIEWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-E 116
              +     GLN    E Y+Q++ N R   +G  PL++   + P    W+S+  +    +
Sbjct: 269 QYVIGDNIQGLNWKMIEDYIQYLGNLRWSSLGFGPLYEENHKEPESMHWVSQYSNANMVK 328

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L+ D
Sbjct: 329 TDFFEAKSTAYAKSTALEDD 348


>gi|323343338|ref|ZP_08083565.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           oralis ATCC 33269]
 gi|323095157|gb|EFZ37731.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           oralis ATCC 33269]
          Length = 349

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    +++ ++K E P ++T E  +    M+ E    EIA+ 
Sbjct: 209 MSGSAQEIRYINRDENTHLWLFRNILQELKKEEPKMFTPEKVKVYEEMMREGVRQEIAWG 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT----ENPFPWMSEVIDLKK- 115
              +     GLN      Y+ ++ N R H +G   L+       EN   W+S+  +    
Sbjct: 269 QYVIGDEVPGLNTKMVSDYIHYLGNLRWHSLGFGYLYDENIQEPEN-MKWVSQYSNANMV 327

Query: 116 EKNFFETRVTEYQQGAGLKWD 136
           + +FFE + T Y +   L+ D
Sbjct: 328 KTDFFEAKSTAYAKSTALEDD 348


>gi|228861726|ref|YP_002854746.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
 gi|226425174|gb|ACO53586.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
          Length = 339

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 6/132 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH NF     N+   E      K   ++   M  EA  +E  + 
Sbjct: 203 MPGLTFSNELISRDEGLHTNFACLYYNEYIPE----HDKLSSERILDMFIEAVEIEKEFF 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N  S  +Y++F+A+R    +     F    NPF +M+  I ++ + NFF
Sbjct: 259 KTALPCSLLGMNTESMCRYIEFVADRLLVDLNQPKHF-MASNPFNFMT-NISMEGKTNFF 316

Query: 121 ETRVTEYQQGAG 132
           E RV EY++   
Sbjct: 317 ERRVGEYRRFGA 328


>gi|242309209|ref|ZP_04808364.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
 gi|239524250|gb|EEQ64116.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
          Length = 341

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN  K E+P  +TK+ +++   M  EA  +EIA+ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLLLFQNMINSTKKESPEFFTKDLEEEVLEMFREAVKVEIAWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL A   ++Y++++A+ R  ++GL  L+   ++P  W+       + + NF
Sbjct: 265 EYITQGQILGLTAEIIQEYIKYLADDRLRRVGLPVLYN-AKHPIKWVDSFSSFNEQKTNF 323

Query: 120 FETRVTEYQQGA 131
           FE  VT Y +G+
Sbjct: 324 FEGNVTNYAKGS 335


>gi|157952945|ref|YP_001497837.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
 gi|155123172|gb|ABT15040.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
          Length = 324

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 74/134 (55%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  FG  + ++++        K   +  + ++ EA   E  + 
Sbjct: 188 MPGLCLSNEFISRDEGLHQQFGELMYSKLQ-------NKLSFETIKQIIMEAVTNEKEFI 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+NA    QY++F+A+R    +G E ++  ++NPF +M E+I L+ + NFF
Sbjct: 241 CDAIPCSMIGMNADLMNQYIEFVADRIFTALGYEKVYN-SKNPFAFM-ELISLEGKTNFF 298

Query: 121 ETRVTEYQQGAGLK 134
           E RV++YQ+   + 
Sbjct: 299 EKRVSDYQRPGVMN 312


>gi|160937686|ref|ZP_02085046.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439331|gb|EDP17083.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
           BAA-613]
          Length = 347

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T +     R+ML E    EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRSMIAELRKEEPQLFTPKMVDMLRSMLEEGVAQEIQWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
              +     GL       Y++++ N R   +G   L++ Y E P    W+++  +    +
Sbjct: 267 CYVIGDDVPGLTREMVTDYIRYLGNLRWSGLGFGTLYEGYDEEPQSMKWVNQYSNANMVK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + A +  D
Sbjct: 327 TDFFEAKSTAYAKSAAIVDD 346


>gi|187932511|ref|YP_001884520.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum B str. Eklund 17B]
 gi|187720664|gb|ACD21885.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B str. Eklund 17B]
          Length = 344

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ ENP  +T + + + R M+H     EI + 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNIIKELQSENPESFTADLKNELREMMHIGVENEILWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKN 118
           H  +     G+N    E Y++++ N+R  +IGLEPLF  Y ENP  W+  V +    + +
Sbjct: 266 HYVIGDKIQGINKKLIEDYIKYLGNKRLKEIGLEPLFSGYEENPATWVDVVANSNSVKTD 325

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE + T Y + + L  D
Sbjct: 326 FFEAKSTAYAKVSTLIDD 343


>gi|269864629|ref|XP_002651641.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064151|gb|EED42415.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 277

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I  +               ++ EA  +E  + 
Sbjct: 143 MPGLTFSNELISRDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFL 193

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 194 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 251

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 252 ERREANYQKG 261


>gi|68304258|ref|YP_249726.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
 gi|67973087|gb|AAY84053.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
          Length = 318

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 6/132 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I RDE LH +F     N+   E      K  + K  +M  EA  +E  + 
Sbjct: 182 LPGLTYSNELISRDEGLHTDFACLYYNKYIPEK----NKLSKTKVLSMFVEAVDIEKDFF 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+N+ S  +Y++F+A+R   ++G +  F  T NPF +M+  I L+ + NFF
Sbjct: 238 TNALPVAMLGMNSQSMCEYIEFVADRLLFELGYDKHFN-TANPFEFMN-NISLEGKTNFF 295

Query: 121 ETRVTEYQQGAG 132
           E RV EY++   
Sbjct: 296 EKRVGEYKRFGA 307


>gi|269863618|ref|XP_002651286.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064807|gb|EED42770.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 332

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I  +               ++ EA  +E  + 
Sbjct: 207 MPGLTFSNELISRDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 258 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 315

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 316 ERREANYQKG 325


>gi|239628850|ref|ZP_04671881.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518996|gb|EEQ58862.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 347

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I ++K E P L+T +  +    ML E    EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRSMIGELKKEEPGLFTPDNVKMLEDMLREGVSQEIEWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-E 116
              +     GL       Y++++ N R   +G EPL++          W+++  +    +
Sbjct: 267 CYVIGDEVPGLTKDMVSSYIKYLGNLRWTGLGFEPLYEGYGKEPESMAWVNQYSNANMVK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + A +  D
Sbjct: 327 TDFFEAKSTAYAKSAAIIDD 346


>gi|152989800|ref|YP_001355522.1| ribonucleotide-diphosphate reductase subunit beta [Nitratiruptor
           sp. SB155-2]
 gi|151421661|dbj|BAF69165.1| ribonucleoside-diphosphate reductase, beta subunit [Nitratiruptor
           sp. SB155-2]
          Length = 341

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 3/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN +K E P L+TKE       M   A  LE ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLLIFQNMINTVKKERPELFTKELIDDVYKMFEGAVDLETSWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +GL     EQY++++A+ R  ++GLEP++   E+P  W+ +       + NF
Sbjct: 265 KYITQGQILGLTDEIIEQYIKYLADDRLKRVGLEPMYN-VEHPIKWVDDFSKFNDQKTNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE  VT Y +G+ L +D
Sbjct: 324 FEGNVTNYSKGS-LDFD 339


>gi|307565004|ref|ZP_07627521.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           amnii CRIS 21A-A]
 gi|307346317|gb|EFN91637.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           amnii CRIS 21A-A]
          Length = 347

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T E       M+ E    EIA+ 
Sbjct: 207 MPGSAQEIRYINRDENTHLWLFRNIIVELKQEEPDLFTPEKVAVYEEMMREGVRQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NP--FPWMSEVIDLKK-E 116
              +     GL       Y++++ N R   +G + LF+  +  P    W+++  +    +
Sbjct: 267 QYVIGNDVQGLTQQMVYDYIRYLGNLRWKSLGFDYLFEDNQAEPADMQWVAQYSNANMVK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L  D
Sbjct: 327 TDFFEAKSTAYAKSTALIDD 346


>gi|291165654|gb|EFE27703.1| ribonucleoside-diphosphate reductase, beta subunit [Filifactor
           alocis ATCC 35896]
          Length = 348

 Score =  160 bits (405), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I ++K E P L+T E  +  R M+ +    EI +A
Sbjct: 208 MPGTVQEIRYINRDENSHLWLFRSIILELKKEEPELFTPENIEVFRNMIRQGVEEEIKWA 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-E 116
           +  +     GL     E Y++++ N RC  +G EP+++          W+SE  D    +
Sbjct: 268 NYVIGDHIKGLTMQMVEDYLKYLGNLRCRGLGFEPIYEGYQREPESMSWVSEYSDPNAIK 327

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE +V+ Y + + ++ D
Sbjct: 328 TDFFEGKVSAYAKSSVIEDD 347


>gi|15639047|ref|NP_218493.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189025287|ref|YP_001933059.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|6093976|sp|O83092|RIR2_TREPA RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3322311|gb|AAC65049.1| ribonucleoside-diphosphate reductase, subunit beta (nrdB)
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189017862|gb|ACD70480.1| ribonucleoside-diphosphate reductase, subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|291059468|gb|ADD72203.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           pallidum subsp. pallidum str. Chicago]
          Length = 351

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P ++T    +  R M+ E    EI + 
Sbjct: 211 MPGSVQEIRYINRDENTHLWLFRSIIQELQKEEPQVFTARNVRLFRDMIREGCEQEIKWG 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-E 116
              +     GLN      Y++++ N RC  +G EPL++          W+S+  +    +
Sbjct: 271 DYVIGDQIPGLNRHMVADYIRYLGNLRCENLGFEPLYEGHRVEPESMSWVSQYSNANLIK 330

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + +  D
Sbjct: 331 TDFFEAKSTAYAKSSAMVDD 350


>gi|153940168|ref|YP_001392091.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|170756361|ref|YP_001782419.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|152936064|gb|ABS41562.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|169121573|gb|ACA45409.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|322807123|emb|CBZ04697.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Clostridium botulinum H04402 065]
          Length = 342

 Score =  159 bits (404), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K EN H++T+E +++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +GLN    E+Y+++++N R   IGL+PL+ +  ++P  W+     L   + +
Sbjct: 262 QYVTNNEILGLNDELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|17158292|ref|NP_477710.1| wsv188 [Shrimp white spot syndrome virus]
 gi|14189948|gb|AAK55515.1|AF267731_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
 gi|15021490|gb|AAK77767.1|AF369029_98 ORF98, putative ribonucleotide reductase small subunit (RR2)
           [shrimp white spot syndrome virus]
 gi|17016586|gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus]
 gi|19481835|gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus]
          Length = 413

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 8/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    ++I RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  + 
Sbjct: 238 LPGLTSSNEFISRDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFL 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             ++P   VG+N     QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFF
Sbjct: 292 TVSLPVKLVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMD-NISLENKTNFF 349

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 350 EKRVAEYQRAQVM 362


>gi|260912588|ref|ZP_05919119.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260633300|gb|EEX51459.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 348

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I+++K E P  +T E  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRNIIHEMKKEEPEYFTPEKVKLYEEMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-E 116
              +     GLN      Y++++ N R   +G   LF+   E P    W+S+  +    +
Sbjct: 268 QYVIGDEVQGLNGQMVNDYIRYLGNMRWRSLGFGNLFEDNIEEPENMRWVSQYANANMVK 327

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   ++ D
Sbjct: 328 TDFFEAKSTAYAKSTAIEDD 347


>gi|269864962|ref|XP_002651756.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269866721|ref|XP_002652369.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062645|gb|EED41686.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063933|gb|EED42300.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 135

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I  +               ++ EA  +E  + 
Sbjct: 1   MPGLTFSNELISRDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFL 51

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     QY++F+A+R    +G + ++  + NPF +M E I L+ + NFF
Sbjct: 52  SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFDFM-ENISLQGKTNFF 109

Query: 121 ETRVTEYQQG 130
           E R   YQ+G
Sbjct: 110 ERREANYQKG 119


>gi|332180128|gb|AEE15816.1| ribonucleotide reductase [Treponema brennaborense DSM 12168]
          Length = 346

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P ++T+E       ML E    EI + 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFKNIILELKKERPDMFTEEKVASYAEMLKEGVRQEIEWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENP--FPWMSEVIDLKK-E 116
              +     GL       Y+ ++ N R   +   PL+      P    W+S   +    +
Sbjct: 266 EYVIGDDIPGLTRKMVRDYITYLGNLRWTNLDFPPLYPGFDTEPEDMAWVSAYSNANMVK 325

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y +   L  D
Sbjct: 326 TDFFEARSTAYAKSTALVDD 345


>gi|298207002|ref|YP_003715181.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
 gi|83849636|gb|EAP87504.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
          Length = 325

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 8/136 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H +F + +       N HL  K  +++ R ++ +A  +E  + 
Sbjct: 186 MPGLTFSNELISRDEGMHCDFAVHL------HNKHLVNKVSKERIREIIVDALNIEREFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++F+ +R   ++  E  +  T NPF +M  +I L+ + NFF
Sbjct: 240 TESLPASLIGMNSNLMTQYLEFVTDRLLLELECEKEYN-TANPFDFMD-MISLQGKTNFF 297

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV +YQ+   +  D
Sbjct: 298 EKRVGDYQKAGVMDQD 313


>gi|239982206|ref|ZP_04704730.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           albus J1074]
 gi|291454052|ref|ZP_06593442.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
 gi|291357001|gb|EFE83903.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
          Length = 350

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 81/136 (59%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + Q++   ML EA   E+ +A +
Sbjct: 214 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDKLQEQVVAMLKEAVEAELQFARD 273

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 274 LCGDGLPGMNTESMREYLECVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFER 331

Query: 123 RVTEYQQG--AGLKWD 136
           RV+ YQ      + +D
Sbjct: 332 RVSAYQVAVEGTVSFD 347


>gi|258511567|ref|YP_003185001.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478293|gb|ACV58612.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 369

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G   + ++I RDE  HL    ++ ++I  ENP + T + +++   M+  A   EIA+ 
Sbjct: 230 MLGTVSEIKFIQRDELTHLAIFRNLYHEIIRENPGIVTPDMEEEFVEMMRTAVQHEIAWG 289

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKE-KN 118
                   VGL     + Y++++AN R   + L  L+ +  E+P PWM     +     +
Sbjct: 290 QYVTQGKIVGLTDALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTD 349

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE RVT Y +   L WD
Sbjct: 350 FFEQRVTNYTKAGNLNWD 367


>gi|73979723|ref|XP_856346.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
           (Ribonucleotide reductase small chain) isoform 3 [Canis
           familiaris]
          Length = 381

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 22/134 (16%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 257 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVHKPSEQRVKEIIINAVRIEQEFL 309

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N    +QY++F+                 ENPF +M E I L+ + NFF
Sbjct: 310 TEALPVKLIGMNCTLMKQYIEFVFR--------------VENPFDFM-ENISLEGKTNFF 354

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 355 EKRVGEYQRMGVMS 368


>gi|7672989|gb|AAF66689.1|AF144620_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
          Length = 413

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 8/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    ++I RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  + 
Sbjct: 238 LPGLTSSNEFISRDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFL 291

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             ++P   VG+N     QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFF
Sbjct: 292 TVSLPVKLVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMD-NISLENKTNFF 349

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 350 EKRVAEYQRAQVM 362


>gi|269958883|ref|YP_003328672.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
 gi|269848714|gb|ACZ49358.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
          Length = 332

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   +  RDE+LH    I + N    EN  +W    + +          LE  + 
Sbjct: 189 MKGMGQIIAWSARDETLHTESIIRLFNTFIHENQEIWDANLRAELYGACRVIVSLEDEFI 248

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                     GL+A   ++Y+++IANRR  Q+ LEP++    NP PW+ E+++  +  NF
Sbjct: 249 DLAFALGDVEGLSASEVKRYIRYIANRRLKQLDLEPIYGDNVNPLPWLDEILNGVEHTNF 308

Query: 120 FETRVTEYQQGAGL-KWD 136
           FE RVTEY + A    WD
Sbjct: 309 FENRVTEYSRAATEGTWD 326


>gi|91205547|ref|YP_537902.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii RML369-C]
 gi|91069091|gb|ABE04813.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia bellii
           RML369-C]
          Length = 324

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +      ENP +WT+  + +           E A+ 
Sbjct: 178 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAFI 237

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A     Y+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NF
Sbjct: 238 ALAFEVGGIEGLTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNF 297

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 298 FENRATEYSKAAT 310


>gi|168184457|ref|ZP_02619121.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|237796249|ref|YP_002863801.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           botulinum Ba4 str. 657]
 gi|182672468|gb|EDT84429.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|229263158|gb|ACQ54191.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Ba4 str. 657]
          Length = 342

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K EN H++T+E +++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +GLN    E+Y+++++N R   IGL+PL+ +  ++P  W+     L   + +
Sbjct: 262 QYVTNNEILGLNDELIERYIKYLSNLRLVAIGLKPLYLEINKHPMEWIDSFSKLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|225712968|gb|ACO12330.1| Ribonucleoside-diphosphate reductase small chain [Lepeophtheirus
           salmonis]
          Length = 335

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE  H +F   + +       HL  K   +    ++ E   +E  + 
Sbjct: 197 MPGLTFSNELISRDEGSHTDFACLLYS-------HLENKLDPKYVLQIIKEGVEIEKEFV 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P G +G+NA   + Y++F+A+     + +E  + +T+NPF +M   I +  + NFF
Sbjct: 250 ADSLPVGLIGMNAKMMKNYIEFVADNLLENLNIEK-YYHTKNPFNFMD-NISMTGKTNFF 307

Query: 121 ETRVTEYQQ 129
           + RV+EYQ+
Sbjct: 308 DKRVSEYQR 316


>gi|157827263|ref|YP_001496327.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
 gi|157802567|gb|ABV79290.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
          Length = 324

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +      ENP +WT+  + +           E A+ 
Sbjct: 178 MKGMGQIIAWSVRDETLHTNSIITLFKTFVRENPEVWTENLRSRIYKACTTIVHFEDAFI 237

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A     Y+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NF
Sbjct: 238 ALAFEVGGIEGLTADEVRLYIRYIADRRLFQLGLKDIYMVKNNPLPWLDEMLNGVEHTNF 297

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 298 FENRATEYSKAAT 310


>gi|257792030|ref|YP_003182636.1| ribonucleotide-diphosphate reductase subunit beta [Eggerthella
           lenta DSM 2243]
 gi|317488666|ref|ZP_07947206.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
 gi|257475927|gb|ACV56247.1| Ribonucleoside-diphosphate reductase [Eggerthella lenta DSM 2243]
 gi|316912225|gb|EFV33794.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
          Length = 347

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++ ++K E P L+  E  ++ R M+ E    EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRNILLELKEEEPELFAPELVEEYRAMIKEGCEQEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
           H  +     GLN      Y+Q++ N RC Q+G EPL++  E       W+S+  +    +
Sbjct: 267 HYAIGDDVAGLNKQMVTDYIQYLGNLRCAQLGFEPLYEGHEREPESMSWVSQFSNANMIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y + + L  D
Sbjct: 327 TDFFEARSTAYAKSSALVDD 346


>gi|304439119|ref|ZP_07399038.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
 gi|304372478|gb|EFM26065.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
          Length = 347

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I  +K E P L+T+E  ++ R +L      EIA+ 
Sbjct: 207 MPGTVQEIRYINRDENTHLWLFRSIILDLKKEQPELFTEEKVEEYRALLKYGVEEEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLK-KE 116
              +     GL +   E Y++++ N R   +G EPL++  +       W+++  D+   +
Sbjct: 267 KYVIGDDIQGLTSKMVEDYIKYLGNLRATNLGFEPLYEGYDKEVESMKWVTQYADINLLK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE +VT Y + A ++ D
Sbjct: 327 TDFFEAKVTAYSKSAIIEDD 346


>gi|170761039|ref|YP_001788131.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169408028|gb|ACA56439.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 342

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K EN H++T+E +++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRMGVEHEIQWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +GLN    E+Y+++++N R   IGL+PL+ +  ++P  W+     L   + +
Sbjct: 262 QYVTNNEILGLNDELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDGFSKLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|302554045|ref|ZP_07306387.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471663|gb|EFL34756.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
          Length = 341

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 77/128 (60%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + +Q+   ML EA   E+ +A +
Sbjct: 205 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLRQEVTDMLREAVEAELQFARD 264

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 265 LCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFER 322

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 323 RPSAYQVA 330


>gi|229816571|ref|ZP_04446870.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
 gi|229807906|gb|EEP43709.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
          Length = 352

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I +++ E P L++ E     R ML E    EIA+ 
Sbjct: 212 MPGSAQEIRYINRDENTHLWLFRSIILELQKEEPQLFSNENVTMLREMLEEGVRQEIAWG 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
              +     GL     E Y++++ N R   +G   L++ Y   P    W+S+  +    +
Sbjct: 272 RYVLGDAIPGLTGDMVEGYIKYLGNLRWSSLGFGQLYEGYRTEPADMAWVSQYSNANMVK 331

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L  D
Sbjct: 332 TDFFEAKSTAYAKSTALVDD 351


>gi|148380773|ref|YP_001255314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 3502]
 gi|153932443|ref|YP_001385057.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|153934989|ref|YP_001388527.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
 gi|148290257|emb|CAL84376.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           botulinum A str. ATCC 3502]
 gi|152928487|gb|ABS33987.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|152930903|gb|ABS36402.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
          Length = 342

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K EN H++T+E +++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIKELKNENLHIFTEELEEEFRQMMRMGVEHEIQWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +GLN    E+Y+++++N R   IGL+PL+ +  ++P  W+     L   + +
Sbjct: 262 QYVTNNEILGLNDELIEKYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|157803769|ref|YP_001492318.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
 gi|157785032|gb|ABV73533.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
          Length = 324

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +      ENP +WT+  +++           E A+ 
Sbjct: 178 MKGMGQVIAWSVRDETLHTNSIITLFKTFVRENPEVWTETLRKRIYGACTTIVHFEDAFI 237

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A    QY+++IA+RR  Q+GL+ ++    NP PW+ E+++  +  NF
Sbjct: 238 ELAFEVGGIEGLTAYEVRQYIRYIADRRLMQLGLKDVYLVNHNPLPWLDEMLNGVEHTNF 297

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 298 FENRATEYSKAAT 310


>gi|302536805|ref|ZP_07289147.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
 gi|302445700|gb|EFL17516.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
          Length = 356

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 40/128 (31%), Positives = 75/128 (58%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +
Sbjct: 220 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFGRD 279

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 280 LCGDGLPGMNTDSMREYLECVADQRLVRLGFPPVY-GSQNPFSFM-ELQGVQELTNFFER 337

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 338 RPSAYQVA 345


>gi|218289144|ref|ZP_03493380.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240727|gb|EED07906.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 345

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G   + ++I RDE  HL    ++ ++I  ENP + T + +++   M+  A   EIA+ 
Sbjct: 206 MLGTVSEIKFIQRDELTHLAIFRNLYHEIVRENPGIVTPDMEEEFVEMMRTAVQHEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKE-KN 118
                   VGL     + Y++++AN R   + L  L+ +  E+P PWM     +     +
Sbjct: 266 QYVTQGKIVGLTDALIDAYIKYLANLRLQSLNLPILYPEIKEHPMPWMDSFAAINSHKTD 325

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE RVT Y +   L WD
Sbjct: 326 FFEQRVTNYTKAGNLNWD 343


>gi|260909050|gb|ACX54162.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909052|gb|ACX54163.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909054|gb|ACX54164.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909056|gb|ACX54165.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 349

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 8/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    ++I RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  + 
Sbjct: 223 LPGLTSSNEFISRDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFL 276

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             ++P   VG+N     QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFF
Sbjct: 277 TVSLPVKLVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMD-NISLENKTNFF 334

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+   +
Sbjct: 335 EKRVAEYQRAQVM 347


>gi|51891459|ref|YP_074150.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855148|dbj|BAD39306.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
          Length = 346

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 1/137 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A + Q+I RDE  H+    +++N ++ E P L+T +     R M+ +A   E+A+A
Sbjct: 208 MKGTATEIQFINRDEITHVAVFQNILNGLRQERPQLFTPQLDADLRAMIRQAAEHEMAWA 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
              +     GL+    + Y++ +A++R   +G EPL+    NP  W+    +L + + +F
Sbjct: 268 AYCVGNRIQGLSGEVLQGYVKHLADQRARALGFEPLYGNHPNPIKWVESFSNLNQTKADF 327

Query: 120 FETRVTEYQQGAGLKWD 136
           FETRVT Y +   +  D
Sbjct: 328 FETRVTNYAKSTNIDLD 344


>gi|114799612|ref|YP_759103.1| ribonucleotide-diphosphate reductase subunit beta [Hyphomonas
           neptunium ATCC 15444]
 gi|114739786|gb|ABI77911.1| ribonucleoside-diphosphate reductase, beta subunit [Hyphomonas
           neptunium ATCC 15444]
          Length = 345

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   + T E +++ R        LE  + 
Sbjct: 186 MKGMGQIVTWSIRDESLHCEGMIKLFHSFCAETG-VMTDELRERIRDCCRTVVALEDKFI 244

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+ A   + Y+++IA+ R +Q+ LEP++  T++P PW++E+++  +  NF
Sbjct: 245 ELAFEMGPVEGMTADDIKNYIRYIADWRLNQLKLEPIYGVTKHPIPWLTEILNGVEHANF 304

Query: 120 FETRVTEYQQGAG 132
           FE R TEY +GA 
Sbjct: 305 FEQRSTEYSKGAT 317


>gi|312599293|gb|ADQ91316.1| hypothetical protein BpV2_149c [Bathycoccus sp. RCC1105 virus BpV2]
          Length = 387

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 69/129 (53%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I RDE +H  F +++ N +K        K   +    ++ +A  +E  + 
Sbjct: 254 LPGLCFSNELISRDEGMHQEFAVELFNMLK-------NKPSGEIIEEIIRDAVTIEKEFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++++A+R   Q+G + ++  T+NPF +M E I L  + NFF
Sbjct: 307 TDALPCSLIGMNSSKMSEYIEYVADRLSKQVGHDKIWN-TKNPFDFM-ENISLDGKTNFF 364

Query: 121 ETRVTEYQQ 129
           E RV +Y +
Sbjct: 365 EKRVGDYGK 373


>gi|319936387|ref|ZP_08010803.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. 29_1]
 gi|319808502|gb|EFW05054.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. 29_1]
          Length = 346

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T +  +  R M+      EIA+ 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNMILELQKEEPDLFTPDKIEVYRDMMKRGVEEEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-E 116
              +     GL       Y+ ++ N R   +  EPLF+          W+S   +    +
Sbjct: 266 QYVLGDRIEGLTMKMVSDYIHYLGNFRAQALNFEPLFEDYMQEPESMKWVSIYSNANDIK 325

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R + Y + + L+ D
Sbjct: 326 TDFFEARSSAYAKSSALEDD 345


>gi|29829569|ref|NP_824203.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           avermitilis MA-4680]
 gi|29606677|dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptomyces avermitilis MA-4680]
          Length = 338

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 76/128 (59%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  +V++ ++ E P L+  E QQ+   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDDELQQQVTDMLREAVEAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 262 LCGDGLPGMNTESMRQYLECVADQRLQRLGFAPVY-GSENPFSFM-ELQGVQELTNFFER 319

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 320 RASAYQVA 327


>gi|317011285|gb|ADU85032.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SouthAfrica7]
          Length = 341

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKIY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|88658048|ref|YP_507564.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           chaffeensis str. Arkansas]
 gi|88599505|gb|ABD44974.1| ribonucleoside-diphosphate reductase, beta subunit [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 324

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + N    EN  +W    +Q+          LE  + 
Sbjct: 181 MKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDDSLKQELYEACRIIVSLEDEFI 240

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
           +     G   GL++   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NF
Sbjct: 241 NLAFACGDVEGLSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGAG 132
           FE RVTEY + A 
Sbjct: 301 FENRVTEYARAAT 313


>gi|315452596|ref|YP_004072866.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
 gi|315131648|emb|CBY82276.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
          Length = 347

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL     +I+ +K E P L++K+  ++   M  EA  LE  + 
Sbjct: 211 MLGSAQMIRFIQRDEVTHLALFQSMIHTLKKERPDLFSKDLVEEILEMFKEAVDLESTWG 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   + LN  +   Y++++A+ R H IGL  ++ +T++P  W+ +      +  NF
Sbjct: 271 RVITQGEILDLNPVTLRAYIEYLADTRLHAIGLPKIY-HTKHPMRWVDQFSSFNSQRSNF 329

Query: 120 FETRVTEYQQGA 131
           FE RV+ Y +G+
Sbjct: 330 FEARVSNYSKGS 341


>gi|262277047|ref|ZP_06054840.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
 gi|262224150|gb|EEY74609.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
          Length = 342

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I + N    ENP L  +  +++           E A+ 
Sbjct: 198 MKGMGQVVTWSVRDETLHCNSMIKIFNTFCAENPGLLDESLKKEITDACRTIVEHEDAFI 257

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   + Y+++IANRR  Q+ L+ ++   ENP  W+  +++  +  NF
Sbjct: 258 DLAFEMGPIEGLTAQQIKDYIRWIANRRLVQLKLDEIYDVKENPLEWIDTMLNGVEHMNF 317

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + + 
Sbjct: 318 FEGRATEYSKAST 330


>gi|256785295|ref|ZP_05523726.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           lividans TK24]
 gi|289769189|ref|ZP_06528567.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
 gi|289699388|gb|EFD66817.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
          Length = 343

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 77/128 (60%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + +++   ML EA   E+ +A +
Sbjct: 207 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARD 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 267 LCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFER 324

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 325 RPSAYQVA 332


>gi|9634266|ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
 gi|6960505|gb|AAF33575.1|AF169823_45 ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
          Length = 313

 Score =  157 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 8/135 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH NF     N    +     T         M  EA  +E+ + 
Sbjct: 179 MPGLTFSNELISRDEGLHTNFACLYYNTRVDQKLDAPT------VNDMFSEAVAIEMEFF 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P+  VG+NA    +Y++F+A+R   Q+    ++ YTENPF +M+  I L+ + NFF
Sbjct: 233 AEALPESLVGMNANMMRKYIEFVADRLLVQLKYPKMY-YTENPFEFMN-NISLEGKTNFF 290

Query: 121 ETRVTEYQQGAGLKW 135
           E RV EY++    + 
Sbjct: 291 EKRVGEYKRFGAGED 305


>gi|21223593|ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
 gi|7328345|emb|CAB82486.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces coelicolor A3(2)]
 gi|8546891|emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
          Length = 343

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 77/128 (60%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + +++   ML EA   E+ +A +
Sbjct: 207 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFARD 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 267 LCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFER 324

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 325 RPSAYQVA 332


>gi|74229799|ref|YP_309003.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
 gi|72259713|gb|AAZ67484.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
          Length = 318

 Score =  157 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 6/132 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I RDE LH +F     N+   +      K  + K   M  EA  +E  + 
Sbjct: 182 LPGLTYSNELISRDEGLHTDFACLYYNKYIAKE----DKLSESKVLNMFKEAVDIEKDFF 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+NA S  +Y++F+A+R   ++G E  FK T NPF +M+  I L+ + NFF
Sbjct: 238 TNALPVAMLGMNAHSMCEYIEFVADRLLIELGYEKYFK-TLNPFEFMN-NISLEGKTNFF 295

Query: 121 ETRVTEYQQGAG 132
           E RV EY++   
Sbjct: 296 EKRVGEYKRFGA 307


>gi|294631326|ref|ZP_06709886.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
 gi|292834659|gb|EFF93008.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
          Length = 339

 Score =  157 bits (398), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 77/128 (60%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + +Q+   ML EA   E+ +A +
Sbjct: 203 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDQLEQQVTDMLREAVEAELQFARD 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 263 LCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFER 320

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 321 RPSAYQVA 328


>gi|90023100|ref|YP_528927.1| amino acid adenylation [Saccharophagus degradans 2-40]
 gi|89952700|gb|ABD82715.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 368

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 62/136 (45%), Positives = 80/136 (58%), Gaps = 4/136 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ QYIMRDE++H  FGI  ++QI IEN    T       +TM  EA   E  YA
Sbjct: 237 MKGTAEQLQYIMRDETMHCAFGIQTVSQIIIENC---TNIDVDAIKTMWEEADEAEANYA 293

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              + +  +G +A    +  +FIANRR  Q+GLE  F   +   PW+ E  +++KEKNFF
Sbjct: 294 RYILREPILGYSANDHIEQFRFIANRRARQLGLEEPFPQAKCALPWLDEQANIRKEKNFF 353

Query: 121 ETRVTEYQQGAGLKWD 136
           ETRV EYQ   GL+WD
Sbjct: 354 ETRVIEYQ-AGGLEWD 368


>gi|302386033|ref|YP_003821855.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
 gi|302196661|gb|ADL04232.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
          Length = 368

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G +++ +YI RDE+ HL    ++I +++ E P L+++E  +  RTM+ E    EIA+ 
Sbjct: 228 MTGSSQEIRYINRDENTHLWLFRNIILELEKEEPKLFSRERIEVYRTMIKEGCEQEIAWG 287

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
              +     GL       Y+ ++ N RC  +G   +++ + + P    W+++  +    +
Sbjct: 288 CYAIGDEVPGLTKEMITDYIMYLGNLRCASLGWGRIYEGHDKEPESMSWVNQFSNANLIK 347

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + L  D
Sbjct: 348 TDFFEAKSTAYAKSSALLDD 367


>gi|260591988|ref|ZP_05857446.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           veroralis F0319]
 gi|260536272|gb|EEX18889.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           veroralis F0319]
          Length = 348

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++T+E  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRSIILELKKEEPDMFTEEKVKVYEDMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-E 116
              +     GLN+     Y++++ N R   +G   L+    + P    W+ +  +    +
Sbjct: 268 QYVIGNDVQGLNSQMVSDYIRYLGNLRWSGLGFGFLYPDNQKEPENMKWVGQYSNANMVK 327

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R T Y +   L  D
Sbjct: 328 TDFFEARSTAYAKSTALIDD 347


>gi|288928561|ref|ZP_06422408.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288331395|gb|EFC69979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 348

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I+++K E P  +T E  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRNIIHEMKKEEPEYFTPEKVKVYEEMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-E 116
              +     GLNA     Y++++ N R   +G   L +   E P    W+++  +    +
Sbjct: 268 QYVIGDEVQGLNAQMVNDYIRYLGNMRWRSLGFGNLLEDNIEEPENMRWVAQYANANMVK 327

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   ++ D
Sbjct: 328 TDFFEAKSTAYAKSTAIEDD 347


>gi|163955147|ref|YP_001648251.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
 gi|163638596|gb|ABY27955.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
          Length = 322

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 12/136 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F +++   ++        +        ++ EA  +E  + 
Sbjct: 189 MPGLCFSNELISRDEGLHQEFAVELFKTLR-------NRPGVDTIHAIVREAVEIEKGFI 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++++++R   QIG+  ++  ++NPF +M E I L  + NFF
Sbjct: 242 LDALPCNLIGMNSEKMSEYIEYVSDRLLKQIGVPTIWN-SKNPFDFM-ENISLDGKTNFF 299

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV +Y +   L  D
Sbjct: 300 EKRVGDYGK---LDDD 312


>gi|73974200|ref|XP_858061.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 3 [Canis familiaris]
          Length = 338

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 22/133 (16%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++  A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVNAVEIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P G +G+N    +QY++F+                 ENPF +M E I L+ + NFF
Sbjct: 267 TEALPVGLIGMNCVLMKQYIEFVFQ--------------AENPFDFM-ENISLEGKTNFF 311

Query: 121 ETRVTEYQQGAGL 133
           E RV EYQ+ A +
Sbjct: 312 EKRVAEYQRFAVM 324


>gi|308184827|ref|YP_003928960.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
 gi|308060747|gb|ADO02643.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
          Length = 341

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 72/137 (52%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E+++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEVSWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|290343623|ref|YP_003494990.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
 gi|260161038|emb|CAY39739.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
          Length = 389

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 12/136 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F +++   ++        +        ++ EA  +E  + 
Sbjct: 256 MPGLCFSNELISRDEGLHQEFAVELFKTLR-------NRPGVDTIHAIVREAVDIEKGFI 308

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++++++R   QIG+  ++  ++NPF +M E I L  + NFF
Sbjct: 309 LDALPCNLIGMNSEKMSEYIEYVSDRLLKQIGVPTIWN-SKNPFDFM-ENISLDGKTNFF 366

Query: 121 ETRVTEYQQGAGLKWD 136
           E RV +Y +   L  D
Sbjct: 367 EKRVGDYGK---LDDD 379


>gi|282860353|ref|ZP_06269421.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           bivia JCVIHMP010]
 gi|282586851|gb|EFB92088.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           bivia JCVIHMP010]
          Length = 347

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I ++K E P L+T E       M+ E    EIA+ 
Sbjct: 207 MSGSAQEIRYINRDENTHLWLFRNMIIELKQEEPELFTPEKVAIYEAMMREGVAQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NP--FPWMSEVIDLKK-E 116
              +     GL       Y++++ N R   +G + LF+  +  P    W+++  +    +
Sbjct: 267 QYVIGNEVQGLTQQMVSDYIRYLGNLRWKSLGFDYLFEDNQTEPTDMEWVAQYSNANMVK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L  D
Sbjct: 327 TDFFEAKSTAYAKSTALIDD 346


>gi|68171256|ref|ZP_00544659.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999338|gb|EAM85984.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 294

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + N    EN  +W    +Q+          LE  + 
Sbjct: 151 MKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDDSLKQELYEACRIIVSLEDEFI 210

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
           +     G   GL++   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NF
Sbjct: 211 NLAFACGDVEGLSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEILNGVEHTNF 270

Query: 120 FETRVTEYQQGAG 132
           FE RVTEY + A 
Sbjct: 271 FENRVTEYARAAT 283


>gi|134301991|ref|YP_001121960.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134049768|gb|ABO46839.1| biofunctional glutaredoxin 3 protein/Ribonucleoside-diphosphate
           reductase beta subunit [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 410

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFI 327

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGA-GLKWD 136
           FE RVTEY+       WD
Sbjct: 388 FENRVTEYEVAGLTGSWD 405


>gi|118497575|ref|YP_898625.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. novicida
           U112]
 gi|195536272|ref|ZP_03079279.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208779374|ref|ZP_03246720.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
 gi|254372936|ref|ZP_04988425.1| hypothetical protein FTCG_00507 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|118423481|gb|ABK89871.1| bifunctional protein: glutaredoxin 3 /ribonucleotide reductase beta
           subunit [Francisella novicida U112]
 gi|151570663|gb|EDN36317.1| hypothetical protein FTCG_00507 [Francisella novicida GA99-3549]
 gi|194372749|gb|EDX27460.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208745174|gb|EDZ91472.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
          Length = 410

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFI 327

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGA-GLKWD 136
           FE RVTEY+       WD
Sbjct: 388 FENRVTEYEVAGLTGSWD 405


>gi|118474076|ref|YP_891239.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118413302|gb|ABK81722.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 340

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T E + K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ + R   IGL+ L+   ++P  W+ +      +K NF
Sbjct: 264 KYITGNQIMGFTDDIIEEYIHYLVDDRLTSIGLKKLYN-AKHPIKWVDDFAKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE++VT Y +G+    D
Sbjct: 323 FESKVTNYSKGSLTFDD 339


>gi|56707665|ref|YP_169561.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670136|ref|YP_666693.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           FSC198]
 gi|187931834|ref|YP_001891819.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|224456732|ref|ZP_03665205.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370173|ref|ZP_04986179.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874478|ref|ZP_05247188.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604157|emb|CAG45165.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110320469|emb|CAL08548.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568417|gb|EDN34071.1| hypothetical protein FTBG_01287 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|187712743|gb|ACD31040.1| bifunctional protein: glutaredoxin 3/ribonucleotide reductase beta
           subunit [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|254840477|gb|EET18913.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158827|gb|ADA78218.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 410

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFI 327

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGA-GLKWD 136
           FE RVTEY+       WD
Sbjct: 388 FENRVTEYEVAGLTGSWD 405


>gi|315586979|gb|ADU41360.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           pylori 35A]
          Length = 341

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|254779643|ref|YP_003057749.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori B38]
 gi|254001555|emb|CAX29573.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Helicobacter pylori B38]
          Length = 341

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|317014473|gb|ADU81909.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Gambia94/24]
          Length = 341

 Score =  156 bits (396), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKIY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|118197598|ref|YP_874310.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
 gi|113472593|gb|ABI35800.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
          Length = 341

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F     N        +  K   Q+  +M  EA  +E  + 
Sbjct: 205 MPGLTFSNELISRDEGLHTDFACMYYNNYIP----INEKLSPQQILSMFIEAVDIEKEFF 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P   +G+NA    +Y++F+A+R   ++     F  T NPF +M+  I L+ + NFF
Sbjct: 261 TTALPCYLLGINATEMCKYIEFVADRLLVELRQPKHFN-TPNPFNFMT-NISLEGKTNFF 318

Query: 121 ETRVTEYQQGAG 132
           E RV EY++   
Sbjct: 319 ERRVGEYKRFGA 330


>gi|254374389|ref|ZP_04989871.1| glutaredoxin [Francisella novicida GA99-3548]
 gi|151572109|gb|EDN37763.1| glutaredoxin [Francisella novicida GA99-3548]
          Length = 410

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDKFI 327

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGA-GLKWD 136
           FE RVTEY+       WD
Sbjct: 388 FENRVTEYEVAGLTGSWD 405


>gi|83649535|ref|YP_437970.1| ribonucleotide reductase subunit beta [Hahella chejuensis KCTC
           2396]
 gi|83637578|gb|ABC33545.1| Ribonucleotide reductase, beta subunit [Hahella chejuensis KCTC
           2396]
          Length = 405

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 59/135 (43%), Positives = 75/135 (55%), Gaps = 3/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  EQ QYIMRDE +H  FGI V+ QI  E          +  +T+  EA   E  YA
Sbjct: 274 MKGTGEQLQYIMRDEVMHCAFGIRVVKQIIKEEGVTLDP---KAIKTLWEEAEAAETGYA 330

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           H  + +  +G  A    +  +FIANRR  Q+ L+  F    N  PW+ E   ++KEKNFF
Sbjct: 331 HFLLKEPILGYTAEDHIEQFRFIANRRAKQLKLDEPFPGAGNALPWLDEQASMRKEKNFF 390

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ GA L+W
Sbjct: 391 ETRVTEYQTGASLQW 405


>gi|309775830|ref|ZP_07670824.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916368|gb|EFP62114.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 347

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E PHL+T+E  Q+ + ML      EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRSMILELQKEEPHLFTEELIQEYKDMLRHGVEEEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
              +     GL       Y+ ++ N R + +G   L++  E       W+S   +    +
Sbjct: 267 EYVIGNNIEGLTMEMVSDYIHYLGNLRSNSLGFGSLYEGFESEPKSMEWVSMYANANLIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R + Y + + L  D
Sbjct: 327 TDFFEARSSAYAKSSALVDD 346


>gi|320008647|gb|ADW03497.1| Ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 338

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 75/128 (58%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+  E +Q+   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDELRQQVTDMLKEAVEAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G   L+  +ENPF +M E+  +++  NFFE 
Sbjct: 262 LCGDGLPGMNTESMRQYLECVADQRLTRLGFPALY-GSENPFSFM-ELQGVQELTNFFER 319

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 320 RPSAYQVA 327


>gi|57239055|ref|YP_180191.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|15811135|gb|AAL08816.1|AF308664_1 hypothetical ribonucleoside reductase beta chain [Ehrlichia
           ruminantium]
 gi|57161134|emb|CAH58047.1| putative ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 324

 Score =  156 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + N    EN  +W  + +++          LE  + 
Sbjct: 181 MKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDDDLKKELYEACSVIVTLEDEFI 240

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
           +     G   GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NF
Sbjct: 241 NLAFACGDVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGAG 132
           FE RVTEY + A 
Sbjct: 301 FENRVTEYTRAAT 313


>gi|15612081|ref|NP_223733.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori J99]
 gi|11387046|sp|Q9ZKC3|RIR2_HELPJ RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4155613|gb|AAD06604.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN [Helicobacter
           pylori J99]
 gi|307637755|gb|ADN80205.1| Ribonucleotide reductase of classIa beta subunit [Helicobacter
           pylori 908]
 gi|325996356|gb|ADZ51761.1| Ribonucleotide reductase of class Ia beta subunit [Helicobacter
           pylori 2018]
 gi|325997944|gb|ADZ50152.1| Ribonucleosidase diphosphate reductase beta subunit [Helicobacter
           pylori 2017]
          Length = 341

 Score =  156 bits (395), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIEMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|254369307|ref|ZP_04985319.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122257|gb|EDO66397.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 410

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFI 327

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGA-GLKWD 136
           FE RVTEY+       WD
Sbjct: 388 FENRVTEYEVAGLTGSWD 405


>gi|168179222|ref|ZP_02613886.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
 gi|182669722|gb|EDT81698.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
          Length = 342

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 2/135 (1%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            +  ++YI RDE  HL    ++I ++K EN H++T+E +++ R M+      EI +    
Sbjct: 205 TSTIFKYINRDEVTHLVLFQNIIKELKNENSHIFTEELEEEFRQMMRIGVEHEIQWGQYV 264

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKNFFE 121
                +GLN    E+Y+++++N R   IGL+PL+ +  ++P  W+     L   + +FFE
Sbjct: 265 TNNEILGLNDELIERYIKYLSNLRLVAIGLKPLYPEINKHPMEWIDSFSKLNSTKTDFFE 324

Query: 122 TRVTEYQQGAGLKWD 136
            +VT Y + A   +D
Sbjct: 325 AKVTNYTKAAAFDFD 339


>gi|58578998|ref|YP_197210.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|58417624|emb|CAI26828.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 329

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + N    EN  +W  + +++          LE  + 
Sbjct: 186 MKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDDDLKKELYEACSVIVTLEDEFI 245

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
           +     G   GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NF
Sbjct: 246 NLAFACGDVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNF 305

Query: 120 FETRVTEYQQGAG 132
           FE RVTEY + A 
Sbjct: 306 FENRVTEYTRAAT 318


>gi|109947017|ref|YP_664245.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           acinonychis str. Sheeba]
 gi|109714238|emb|CAJ99246.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           acinonychis str. Sheeba]
          Length = 341

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLIDEVIEMFKKAVKIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKIY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|194319980|pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B
 gi|194319981|pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B
          Length = 326

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 9/118 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         +L  K  +++ R ++ +A  +E  + 
Sbjct: 218 MPGLTFSNELISRDEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFL 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
            E +P G +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + N
Sbjct: 271 TEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTN 326


>gi|313900116|ref|ZP_07833616.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           HGF2]
 gi|312955168|gb|EFR36836.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           HGF2]
          Length = 347

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T+E  ++ + ML      EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRSMILELQKEEPQLFTEELIEEYKDMLRHGVEEEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-E 116
              +     GL       Y+ ++ N R + +G   L+   EN      W+S   +    +
Sbjct: 267 EYVIGNHIEGLTMEMVSDYIHYLGNLRSNSLGFGSLYDGFENEPKSMEWVSMYANANLIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R + Y + + L  D
Sbjct: 327 TDFFEARSSAYAKSSALVDD 346


>gi|254492407|ref|ZP_05105579.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxidans DMS010]
 gi|224462299|gb|EEF78576.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxydans DMS010]
          Length = 383

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/136 (43%), Positives = 74/136 (54%), Gaps = 3/136 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ QYIMRDE +H +FGI V  QI  E          +K + M  EA   E  YA
Sbjct: 251 MKGTAEQLQYIMRDEVMHASFGIRVCKQIMKEENITLDP---KKVQQMFEEADAAEETYA 307

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +    +G +        ++ ANRR  Q+G E  F   E   PW+ E  +++KEKNFF
Sbjct: 308 GYILRDPILGYSKEVHHGQFRYTANRRAKQLGFEEPFPGAEATLPWLDEQANMRKEKNFF 367

Query: 121 ETRVTEYQQGAGLKWD 136
           ET+VTEYQ G GLKWD
Sbjct: 368 ETKVTEYQTGGGLKWD 383


>gi|73666936|ref|YP_302952.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia canis
           str. Jake]
 gi|72394077|gb|AAZ68354.1| Ribonucleoside-diphosphate reductase [Ehrlichia canis str. Jake]
          Length = 324

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + N    EN  +W    + +          LE  + 
Sbjct: 181 MKGMGQIIAWSVRDETLHTESIIRLFNTFVQENYEIWDDSLKHELYEACKIIVSLEDEFI 240

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
           +     G   GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NF
Sbjct: 241 NLAFACGDVEGLSAKEVKKYIRYIANRRLLQLNLEPIYDANKNPLLWLDEILNGVEHTNF 300

Query: 120 FETRVTEYQQGAG 132
           FE RVTEY + A 
Sbjct: 301 FENRVTEYARAAT 313


>gi|225568010|ref|ZP_03777035.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
           15053]
 gi|225163184|gb|EEG75803.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
           15053]
          Length = 355

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     ++ ++K E P L+  E  +  R M+ E    EI + 
Sbjct: 215 MPGSVQEIRYINRDENTHLWLFRSMLQELKKEEPQLFAAEDIKMYRQMIREGCEQEIRWG 274

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKK-E 116
           H  +     GL       Y++++ N RC  +G E +++          W+ +  +    +
Sbjct: 275 HYVIGDKIQGLTKDMITSYIRYLGNLRCTGLGFERIYEGYDTIPESMRWVEQYSNANLIK 334

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + L  D
Sbjct: 335 TDFFEAKSTAYAKSSALVDD 354


>gi|57339646|gb|AAW49810.1| hypothetical protein FTT0532 [synthetic construct]
          Length = 445

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 294 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFI 353

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 354 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 413

Query: 120 FETRVTEYQQGA-GLKWD 136
           FE RVTEY+       WD
Sbjct: 414 FENRVTEYEVAGLTGSWD 431


>gi|89256330|ref|YP_513692.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314778|ref|YP_763501.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502403|ref|YP_001428469.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010840|ref|ZP_02275771.1| ribonucleotide-diphosphate reductase beta subunit [Francisella
           tularensis subsp. holarctica FSC200]
 gi|254367665|ref|ZP_04983686.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|290952877|ref|ZP_06557498.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313922|ref|ZP_06804487.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144161|emb|CAJ79423.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica LVS]
 gi|115129677|gb|ABI82864.1| ribonucleoside-diphosphate reductase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134253476|gb|EBA52570.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|156253006|gb|ABU61512.1| bifunctional glutaredoxin /ribonucleoside-diphosphate reductase
           beta subunit [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 410

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   EF+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNEFKKEIYLMASKAVELEDRFI 327

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGA-GLKWD 136
           FE RVTEY+       WD
Sbjct: 388 FENRVTEYEVAGLTGSWD 405


>gi|317012862|gb|ADU83470.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Lithuania75]
          Length = 341

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|290957506|ref|YP_003488688.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
 gi|260647032|emb|CBG70131.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
          Length = 355

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 39/128 (30%), Positives = 76/128 (59%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  +V++ ++ E P L+ +  +Q+   ML EA   E+ +  +
Sbjct: 219 GLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDELLRQQVTDMLKEAVEAELQFGRD 278

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 279 LCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFER 336

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 337 RPSAYQVA 344


>gi|302558498|ref|ZP_07310840.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
 gi|302476116|gb|EFL39209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
          Length = 341

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 77/128 (60%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+ ++  Q+   ML EA   E+ +A +
Sbjct: 205 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDEQLGQQVTAMLREAVEAELQFARD 264

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 265 LCGDGLPGMNTESMRQYLECVADQRLVRLGFAPVY-GSENPFSFM-ELQGVQELTNFFER 322

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 323 RPSAYQVA 330


>gi|155370749|ref|YP_001426283.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
 gi|155124069|gb|ABT15936.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
          Length = 348

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  FG  + +++         K    + + ++ EA   E  + 
Sbjct: 212 MPGLGLSNEFISRDEGLHQQFGELLYSKL-------ENKLSLAQVKAIVEEAVANEKEFI 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+    QY++F+A+R    +G    +  T NPF +M E+I L+ + NFF
Sbjct: 265 CEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFF 322

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   + 
Sbjct: 323 ERRVSEYQRPGVMN 336


>gi|239929012|ref|ZP_04685965.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 339

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 76/128 (59%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+ +   Q+   ML EA   E+ +A +
Sbjct: 203 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARD 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 263 LCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFER 320

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 321 RPSAYQVA 328


>gi|297202281|ref|ZP_06919678.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
 gi|197710199|gb|EDY54233.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
          Length = 340

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/128 (33%), Positives = 76/128 (59%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+    QQ+   ML EA   E+ +A +
Sbjct: 204 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDRLQQQVTDMLAEAVEAELQFARD 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 264 LCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFER 321

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 322 RPSAYQVA 329


>gi|22788780|ref|NP_690492.1| Rr2 [Heliothis zea virus 1]
 gi|22671540|gb|AAN04367.1|AF451898_72 Rr2 [Heliothis zea virus 1]
          Length = 333

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 6/132 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH +F I +        P    +   +K   ++ +A  +E  + 
Sbjct: 193 MPGLTHSNEFISRDEGLHCDFAILLFRNYL--RPEC--RSSDEKVINIVTDAVRIEQEFL 248

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     +Y++F+A+R  +++    ++   +NPF +M+  I L+ + NFF
Sbjct: 249 TESLPVSMIGMNCKLMCEYIEFVADRLLYELIGRKIYN-AKNPFDFMTS-ISLEGKTNFF 306

Query: 121 ETRVTEYQQGAG 132
           E +V+EY++   
Sbjct: 307 EKKVSEYKRYGV 318


>gi|317009697|gb|ADU80277.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori India7]
          Length = 341

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|297192180|ref|ZP_06909578.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720175|gb|EDY64083.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
          Length = 340

 Score =  155 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 80/136 (58%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+  E +Q+   ML EA   E+ +  +
Sbjct: 204 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDELRQQVTDMLKEAVEAELQFGRD 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  +Y+Q +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 264 LCGEGLPGMNTESMREYLQCVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFER 321

Query: 123 RVTEYQQG--AGLKWD 136
           R + YQ      + +D
Sbjct: 322 RPSAYQVAVEGSVAFD 337


>gi|288801822|ref|ZP_06407264.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica D18]
 gi|302344783|ref|YP_003813136.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica ATCC 25845]
 gi|288335864|gb|EFC74297.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica D18]
 gi|302149273|gb|ADK95535.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica ATCC 25845]
          Length = 348

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++T E  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRSIILELKKEEPDMFTPEKIKVYEDMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENP--FPWMSEVIDLKK-E 116
              +     GLNA     Y++++ N R   +G   L+    + P    W+ +  +    +
Sbjct: 268 QYVIGNDVQGLNAQMVSDYIRYLGNLRWSGLGFGFLYDDNQKEPENMKWVGQYSNANMVK 327

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L  D
Sbjct: 328 TDFFEAKSTAYAKSTALIDD 347


>gi|254388985|ref|ZP_05004216.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|294814921|ref|ZP_06773564.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|326443293|ref|ZP_08218027.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
           ATCC 27064]
 gi|197702703|gb|EDY48515.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|218078699|emb|CAB90708.3| class Ia ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces clavuligerus ATCC 27064]
 gi|294327520|gb|EFG09163.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 339

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 76/128 (59%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ ++ +
Sbjct: 203 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFSRD 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 263 LCGDGLPGMNTESMREYLQCVADQRLARLGFAPVY-GSENPFSFM-ELQGVQELTNFFER 320

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 321 RPSAYQVA 328


>gi|188527870|ref|YP_001910557.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|188144110|gb|ACD48527.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|308063873|gb|ADO05760.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Sat464]
          Length = 341

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|217032591|ref|ZP_03438080.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298735909|ref|YP_003728434.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           pylori B8]
 gi|216945727|gb|EEC24352.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298355098|emb|CBI65970.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           pylori B8]
          Length = 341

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|208434985|ref|YP_002266651.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
 gi|208432914|gb|ACI27785.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
          Length = 341

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPKLINEVIEMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|291437353|ref|ZP_06576743.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
 gi|291340248|gb|EFE67204.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 340

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 76/128 (59%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+ +   Q+   ML EA   E+ +A +
Sbjct: 204 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFARD 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 264 LCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFER 321

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 322 RPSAYQVA 329


>gi|239944172|ref|ZP_04696109.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 15998]
 gi|239990628|ref|ZP_04711292.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 11379]
 gi|291447643|ref|ZP_06587033.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
 gi|291350590|gb|EFE77494.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
          Length = 338

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 76/128 (59%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+  E QQ+   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDELQQQVTDMLKEAVEAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  QY++ +A++R  ++G   ++  +ENPF +M E+  +++  NFFE 
Sbjct: 262 LCGEGLPGMNTESMRQYLECVADQRLARLGFPTVY-GSENPFSFM-ELQGVQELTNFFER 319

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 320 RPSAYQVA 327


>gi|282861024|ref|ZP_06270089.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
 gi|282563682|gb|EFB69219.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
          Length = 340

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 75/128 (58%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +
Sbjct: 204 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLREAVEAELQFGRD 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  QY++ +A++R  ++G   L+  +ENPF +M E+  +++  NFFE 
Sbjct: 264 LCGEGLPGMNTESMRQYLECVADQRLTRLGFPALY-GSENPFSFM-ELQGVQELTNFFER 321

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 322 RPSAYQVA 329


>gi|332184137|gb|AEE26391.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Francisella cf. novicida 3523]
          Length = 410

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   +F+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFI 327

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   +QY++ I +RR +Q+GL+ ++   +NP  W+  +++     NF
Sbjct: 328 ELAYELGTIEGLKADEVKQYIRHITDRRLNQLGLKEIYNIEKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGA-GLKWD 136
           FE RVTEY+       WD
Sbjct: 388 FENRVTEYEVAGLTGSWD 405


>gi|261838422|gb|ACX98188.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori 51]
          Length = 341

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|308183194|ref|YP_003927321.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
 gi|308065379|gb|ADO07271.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
          Length = 341

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|302542646|ref|ZP_07294988.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302460264|gb|EFL23357.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           himastatinicus ATCC 53653]
          Length = 343

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 78/136 (57%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F   V++ ++ E P L+  + +++   ML EA   E+ +AH+
Sbjct: 207 GLATGTNWVFRDESMHMEFAFSVVDTVREEEPDLFDDDLERQVTDMLKEAVEAELQFAHD 266

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S   Y++ +A++R  ++G   +F  +ENPF +M E+ D+++  NFFE 
Sbjct: 267 LCGDGLPGMNTESMRAYLECVADQRLARLGFPAVF-GSENPFSFM-ELQDVQELTNFFER 324

Query: 123 RVTEYQQG--AGLKWD 136
           R + YQ      + +D
Sbjct: 325 RASAYQVAVEGSVSFD 340


>gi|329939692|ref|ZP_08288993.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
 gi|329301262|gb|EGG45157.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
          Length = 347

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 43/128 (33%), Positives = 77/128 (60%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+ +E  ++   ML EA   E+ +A +
Sbjct: 211 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPGLFDEELGRQVTDMLREAVEAELQFARD 270

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  QY+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 271 LCGDGLPGMNTESMRQYLQCVADQRLVRLGFAPVY-GSENPFSFM-ELQGVQELTNFFER 328

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 329 RASAYQVA 336


>gi|317178607|dbj|BAJ56395.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F30]
          Length = 341

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|297380266|gb|ADI35153.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori v225d]
 gi|308062365|gb|ADO04253.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Cuz20]
 gi|317180823|dbj|BAJ58609.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F32]
          Length = 341

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|19074323|ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
 gi|51701822|sp|Q8SRR2|RIR2_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|19068965|emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
          Length = 325

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 11/130 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F   +         H   K+   + + ++ +A  +E  + 
Sbjct: 190 MPGLTFSNELISRDEGLHCEFACLL---------HYHLKKKCNRIKEVVMDAVEIEKKFL 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     +Y++F+A+R    +G E ++  T NPF +M E I L  + NFF
Sbjct: 241 SESLPVNLIGMNCNLMCRYIEFVADRLLENLGEERVYNAT-NPFDFM-ENISLVGKTNFF 298

Query: 121 ETRVTEYQQG 130
           + R ++YQ+ 
Sbjct: 299 DKRESQYQKA 308


>gi|155122339|gb|ABT14207.1| hypothetical protein MT325_M653L [Paramecium bursaria chlorella
           virus MT325]
          Length = 326

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  FG  + +++         K    + + ++ EA   E  + 
Sbjct: 190 MPGLGLSNEFISRDEGLHQQFGELLYSKL-------ENKLSLAQVKAIVEEAVANEKEFI 242

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+N+    QY++F+A+R    +G    +  T NPF +M E+I L+ + NFF
Sbjct: 243 CEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNAT-NPFDFM-ELISLEGKSNFF 300

Query: 121 ETRVTEYQQGAGLK 134
           E RV+EYQ+   + 
Sbjct: 301 ERRVSEYQRPGVMN 314


>gi|322378346|ref|ZP_08052803.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
 gi|322379688|ref|ZP_08054002.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321147887|gb|EFX42473.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321149232|gb|EFX43675.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
          Length = 342

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL+   ++IN ++ E   L++ E   +   M  +A  LE A+ 
Sbjct: 206 MLGSAQMIRFIQRDELTHLHLFQNMINTLRKERSDLFSPELIAEVNEMFKQAVDLESAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   + L+      Y +++A+ R   +GL  L+  ++NP  W+ +  +      NF
Sbjct: 266 AYITQGEMLDLSPQILRTYTEYLADTRLAVVGLPKLYN-SQNPIKWVDQFANFNSHRSNF 324

Query: 120 FETRVTEYQQGA 131
           FE +V+ Y +G+
Sbjct: 325 FEAKVSNYSKGS 336


>gi|315635423|ref|ZP_07890689.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
 gi|315480181|gb|EFU70848.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
          Length = 339

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  ++I RDE  HL    ++IN ++ E P L+T+E ++  R M  +A  LE ++ 
Sbjct: 203 MLGSSQMIRFIQRDEVTHLLLFQNMINSVRKERPDLFTQELEETVRAMFRKAVDLEASWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +G       QY++++A+RR   +G +  +   ++P PW+        +  NF
Sbjct: 263 AYITQGQILGFTDGIIRQYIEYLADRRLEAVGYKAEY-GVKHPIPWVDGYASFNDQRTNF 321

Query: 120 FETRVTEYQQGA 131
           FE  V  Y +G+
Sbjct: 322 FEGNVVNYSKGS 333


>gi|210135249|ref|YP_002301688.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori P12]
 gi|210133217|gb|ACJ08208.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori P12]
          Length = 341

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E ++ 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEASWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|94495782|ref|ZP_01302361.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
 gi|94424474|gb|EAT09496.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
          Length = 350

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    + + +    E   L T   +     M  +   +E A+ 
Sbjct: 178 MKGMGQIVSWSVRDETLHCEGIVRLFHAFVKERDCL-TASVKDDIMDMCQKTVRIEDAFV 236

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NF
Sbjct: 237 DLVFEMGPVPGMTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGAG 132
           FETR TEY + A 
Sbjct: 297 FETRSTEYSKAAT 309


>gi|328884923|emb|CCA58162.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Streptomyces venezuelae ATCC 10712]
          Length = 338

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 75/128 (58%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    +Q+   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALRQQVTDMLKEAVEAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 262 LCGDGLPGMNTESMREYLQCVADQRLQRLGFAPVY-GSENPFSFM-ELQGVQELTNFFER 319

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 320 RPSAYQVA 327


>gi|160881347|ref|YP_001560315.1| ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
 gi|160430013|gb|ABX43576.1| Ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
          Length = 342

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 76/138 (55%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    +++ ++++E   ++TK  +++ R M+      EIA+ 
Sbjct: 202 MTATSTIFKYINRDEITHLVLFQNIMKELRVEQKEMFTKGLEEELREMMRTGVEHEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +G+N    +QY+++++N+R   +GLE L+ + T++P  W+    ++   + +
Sbjct: 262 QYVTDNQILGINNELIDQYIKYLSNQRLRAVGLEILYPEITKHPMEWIESFSNINSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAVFDFD 339


>gi|108563454|ref|YP_627770.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPAG1]
 gi|107837227|gb|ABF85096.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori HPAG1]
          Length = 341

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|261839822|gb|ACX99587.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 52]
          Length = 341

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|296271635|ref|YP_003654266.1| ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
 gi|296095810|gb|ADG91760.1| Ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
          Length = 339

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  ++I RDE  HL    ++IN  + E P L+T E + K R M  +A  LE A+ 
Sbjct: 203 MLGSSQMIKFIQRDEVTHLLLFQNMINSTRKERPDLFTPELEVKVRAMFRKAVELEAAWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +G       QY+Q++A++R   +G +P +   ++P PW+        +  NF
Sbjct: 263 AYITQGQILGFTDGIITQYIQYLADKRLDAVGYKPEYN-VKHPIPWVDGYSSFNDQRTNF 321

Query: 120 FETRVTEYQQGA 131
           FE  V  Y +G+
Sbjct: 322 FEGNVVNYSKGS 333


>gi|217034470|ref|ZP_03439882.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|216943072|gb|EEC22549.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|317177841|dbj|BAJ55630.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F16]
          Length = 341

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIESLWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|307328555|ref|ZP_07607729.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
 gi|306885823|gb|EFN16835.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
          Length = 340

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 44/136 (32%), Positives = 79/136 (58%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F   V++ ++ E P L+  E +Q+   ML EA   E+ +A +
Sbjct: 204 GLATGTNWVFRDESMHMEFAFSVVDTVREEEPDLFDDELRQQVTDMLKEAVEAELQFARD 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S ++Y+Q +A++R  ++G   +F  +ENPF +M E+ ++++  NFFE 
Sbjct: 264 LCGDGLPGMNTASMQEYLQCVADQRLMRLGFPAVF-GSENPFSFM-ELQNVQELTNFFER 321

Query: 123 RVTEYQQG--AGLKWD 136
           R + YQ      + +D
Sbjct: 322 RASAYQVAVEGSVAFD 337


>gi|307295356|ref|ZP_07575195.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
 gi|306878859|gb|EFN10078.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
          Length = 351

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + +    E   L T   +     M  +   +E A+ 
Sbjct: 178 MKGMGQIVSWSVRDETLHCEGIIRLFHAFVKERDCL-TASVKDDIMDMCQKTVRIEDAFI 236

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NF
Sbjct: 237 DLVFEMGPVPGMTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGAG 132
           FETR TEY + A 
Sbjct: 297 FETRATEYSKAAT 309


>gi|317182342|dbj|BAJ60126.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F57]
          Length = 341

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|207092116|ref|ZP_03239903.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPKX_438_AG0C1]
          Length = 341

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|15644992|ref|NP_207162.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 26695]
 gi|2500210|sp|P55983|RIR2_HELPY RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2313466|gb|AAD07432.1| ribonucleoside diphosphate reductase, beta subunit (nrdB)
           [Helicobacter pylori 26695]
          Length = 341

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T +   +   M  +A  +E  + 
Sbjct: 205 MLGSAQMIRFIQRDEVTHLILFQNMINALRNERADLFTPQLINEVIGMFKKAVEIEALWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  NF
Sbjct: 265 DYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSNF 323

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV+ Y +G+    D
Sbjct: 324 FEARVSNYAKGSVSFDD 340


>gi|254384639|ref|ZP_04999978.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
 gi|194343523|gb|EDX24489.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
          Length = 338

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 40/128 (31%), Positives = 75/128 (58%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVDAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y++ +A++R  ++G  P++  ++NPF +M E+  +++  NFFE 
Sbjct: 262 LCGDGLPGMNTESMREYLECVADQRLVRLGFAPVY-GSQNPFSFM-ELQGVQELTNFFER 319

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 320 RPSAYQVA 327


>gi|58617056|ref|YP_196255.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Gardel]
 gi|58416668|emb|CAI27781.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Gardel]
          Length = 329

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + N    EN  +W  + +++          LE  + 
Sbjct: 186 MKGMGQIIAWSVRDETLHTESIIRLFNTFIQENYEIWDGDLKKELYEACSVIVTLEDEFI 245

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
           +     G   GL+A   ++Y+++IANRR  Q+ LEP++   +NP  W+ E+++  +  NF
Sbjct: 246 NLAFACGDVEGLSAQEVKEYIRYIANRRLIQLNLEPIYSANKNPLLWLDEILNGVEHTNF 305

Query: 120 FETRVTEYQQGAG 132
           FE RVTEY + A 
Sbjct: 306 FENRVTEYTRAAT 318


>gi|238061574|ref|ZP_04606283.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
 gi|237883385|gb|EEP72213.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
          Length = 344

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 50/136 (36%), Positives = 82/136 (60%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DV++ ++ E P L+  E  ++ R ML EA   E  +A +
Sbjct: 208 GLASGTNWVFRDESMHMAFAFDVVDTVRHEEPDLFDDELARQVREMLAEAVECEAQFAED 267

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  GL+     QY+Q +A+RR  Q+G+ PL+  + NPF +M E+ D+++  NFFE 
Sbjct: 268 LLEQGVSGLSLDDMRQYLQHVADRRLAQLGIAPLY-GSANPFAFM-ELQDVQELSNFFER 325

Query: 123 RVTEYQQG--AGLKWD 136
           RV+ YQ G    + +D
Sbjct: 326 RVSAYQVGVTGSVTFD 341


>gi|325268390|ref|ZP_08135022.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           multiformis DSM 16608]
 gi|324989244|gb|EGC21195.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           multiformis DSM 16608]
          Length = 348

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++T +  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-E 116
              +     GLN      Y++++ N R   +G   L+    + P    W+ +  +    +
Sbjct: 268 QYVIGNDVQGLNEQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPENMKWVGQYSNANMVK 327

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L  D
Sbjct: 328 TDFFEAKSTAYAKSTALADD 347


>gi|189184364|ref|YP_001938149.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Ikeda]
 gi|189181135|dbj|BAG40915.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Ikeda]
          Length = 359

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +      E P +WT++ + +           E A+ 
Sbjct: 193 MKGMGQIITWSVRDETLHTNSIITLFKTFIQEYPEVWTEQLKSRIYEACCTIIHFEDAFI 252

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   ++Y+++IA+RR  Q+GL+  +   +NP  W+ ++++  +  NF
Sbjct: 253 DLAFEVGGVEGLEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNF 312

Query: 120 FETRVTEYQQGAGL-KWD 136
           FE RVTEY + A    WD
Sbjct: 313 FENRVTEYTRSATTGSWD 330


>gi|157736292|ref|YP_001488975.1| ribonucleotide-diphosphate reductase subunit beta [Arcobacter
           butzleri RM4018]
 gi|157698146|gb|ABV66306.1| ribonucleoside-diphosphate reductase, beta chain [Arcobacter
           butzleri RM4018]
          Length = 339

 Score =  154 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  ++I RDE  HL    ++IN ++ E P L+T E ++  R M  +A  LE ++ 
Sbjct: 203 MLGSSQMIRFIQRDEVTHLLLFQNMINSVRKERPDLFTSELEETVRAMFRKAVDLEASWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +G       QY++++A+RR   +G +  +   ++P PW+        +  NF
Sbjct: 263 AYITQGQILGFTDGIIRQYIEYLADRRLEAVGYKAEY-GVKHPIPWVDGYASFNDQRTNF 321

Query: 120 FETRVTEYQQGA 131
           FE  V  Y +G+
Sbjct: 322 FEGNVVNYSKGS 333


>gi|313768143|ref|YP_004061574.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
 gi|312599750|gb|ADQ91771.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
          Length = 387

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I RDE +H  F +++ N +K        K  Q     ++ +A  +E  + 
Sbjct: 254 LPGLCFSNELISRDEGMHQEFAVELFNMLK-------NKPSQNTIEEIIRDAVSIEKEFI 306

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +P   +G+N+    +Y++++A+R   Q+G   ++  T+NPF +M E I L  + NFF
Sbjct: 307 TDALPCSLIGMNSGKMSEYIEYVADRLSKQVGHNKIWN-TKNPFDFM-ENISLDGKTNFF 364

Query: 121 ETRVTEYQQ 129
           E RV +Y +
Sbjct: 365 EKRVGDYGK 373


>gi|255323570|ref|ZP_05364700.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
 gi|255299284|gb|EET78571.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
          Length = 340

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T E + K   M   A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRTERPDLFTPETEAKIYDMFERAGELEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      EQY++++ ++R   IGL+  +    +P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEQYIRYLIDQRLVAIGLKRRYN-VPHPIKWVDDFAKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE +VT Y +G+    D
Sbjct: 323 FEAKVTNYSKGSISFDD 339


>gi|255658865|ref|ZP_05404274.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
 gi|260849270|gb|EEX69277.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
          Length = 347

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    +++  ++ E P L+T E ++  R M+ E    EIA+ 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRNILRDLRAEEPDLFTPEREEMMREMIREGVRQEIAWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENP--FPWMSEVIDLK-KE 116
              +     GLN    E Y+ ++ N R   IGL  L++   E P    W+S+  +    +
Sbjct: 267 KYAIGNEVEGLNEKMIEDYVHYLGNARAESIGLGTLYEGFEEEPSSMRWVSQYANPNFIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +F E R T Y +   L  D
Sbjct: 327 TDFIEGRSTAYAKSTALVDD 346


>gi|167756571|ref|ZP_02428698.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
 gi|237733862|ref|ZP_04564343.1| ribonucleotide-diphosphate reductase subunit beta [Mollicutes
           bacterium D7]
 gi|167702746|gb|EDS17325.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
 gi|229382943|gb|EEO33034.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. D7]
          Length = 346

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ E P L+T E  +  R ML      EIA+ 
Sbjct: 206 MSGSAQEIRYINRDENTHLWLFRNMIIELQKEEPTLFTPEKIEVYRNMLKRGVEEEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
              +     GL       Y+ ++ N R   +  EPL++  E       W+S   +    +
Sbjct: 266 QYVLGNRIEGLTMDMVSDYIHYLGNLRAFSLNFEPLYEGFETEPEAMKWVSIYSNANNIK 325

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + ++ D
Sbjct: 326 TDFFEAKSTAYAKSSAIEDD 345


>gi|117928932|ref|YP_873483.1| ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
 gi|117649395|gb|ABK53497.1| Ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
          Length = 348

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 49/130 (37%), Positives = 80/130 (61%), Gaps = 2/130 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DVI+ ++ E P L+  E  +++R ML EA   E  +A +
Sbjct: 212 GLASGTNWVFRDESMHMAFAFDVIDTVRREEPELFDDELARQAREMLAEAVDCETQFAED 271

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  G++      Y++ +A+RRC Q+GLEP++  + NPF +M E+ D+++  NFFE 
Sbjct: 272 LLGQGVPGMSLADMRSYLEHVADRRCVQLGLEPIY-GSPNPFTFM-ELQDVQELSNFFER 329

Query: 123 RVTEYQQGAG 132
           RV  YQ G  
Sbjct: 330 RVAAYQIGVS 339


>gi|322499081|emb|CBZ34153.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 269

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 16  SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPS 75
            LH +F   + N       H+  K  +++   ++ +A  +E  +  + +P   +G+NA  
Sbjct: 145 GLHTDFACLLYNS------HIKHKLPRERVLEIIVDAVNIEREFICDALPVRLIGMNAEL 198

Query: 76  CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGLK 134
             QY++F+A+R    +G E  ++ T+ PF +M E+I L+ + NFFE +V EYQ+   + 
Sbjct: 199 MAQYIEFVADRLLVSLGEEKHYRSTQ-PFDFM-EMISLQGKTNFFEKKVGEYQKAGVMS 255


>gi|148284015|ref|YP_001248105.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Boryong]
 gi|146739454|emb|CAM79093.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Boryong]
          Length = 329

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I +      E P +WT++ + +           E A+ 
Sbjct: 178 MKGMGQIITWSVRDETLHTNSIITLFKTFIQEYPEVWTEQLKSRIYEACCTIIHFEDAFI 237

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   ++Y+++IA+RR  Q+GL+  +   +NP  W+ ++++  +  NF
Sbjct: 238 DLAFEVGGVEGLEARDVKKYIRYIADRRLLQLGLKENYLIEQNPLTWLDQILNGVEHTNF 297

Query: 120 FETRVTEYQQGAGL-KWD 136
           FE RVTEY + A    WD
Sbjct: 298 FENRVTEYTRSATTGSWD 315


>gi|325859841|ref|ZP_08172971.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola CRIS 18C-A]
 gi|325482767|gb|EGC85770.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola CRIS 18C-A]
          Length = 348

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++T +  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRSIILELKKEEPDMFTPDRIKVYEDMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-E 116
              +     GLN      Y++++ N R   +G   L+    + P    W+ +  +    +
Sbjct: 268 QYVIGNDVQGLNEQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPENMKWVGQYSNANMVK 327

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L  D
Sbjct: 328 TDFFEAKSTAYAKSTALVDD 347


>gi|326792202|ref|YP_004310023.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
 gi|326542966|gb|ADZ84825.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
          Length = 342

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K ENP L+T+   ++ R M+      EIA+ 
Sbjct: 202 MTATSTIFKYINRDEITHLVVFQNIIKELKKENPELFTESMIEEFREMMRVGVEHEIAWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKN 118
                   +G+N    + Y+++++N+R   IGLE L+ + T +P  W+     L   + +
Sbjct: 262 QYVTANEIMGINDQLIDAYIKYLSNQRLKAIGLEELYPEITTHPMAWIDSFSKLNNTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|182436093|ref|YP_001823812.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326776718|ref|ZP_08235983.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178464609|dbj|BAG19129.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326657051|gb|EGE41897.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 338

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 75/128 (58%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDALQQQVTDMLKEAVEAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  QY++ +A++R  ++G   ++  +ENPF +M E+  +++  NFFE 
Sbjct: 262 LCGEGLPGMNTESMRQYLECVADQRLARLGFPTVY-GSENPFSFM-ELQGVQELTNFFER 319

Query: 123 RVTEYQQG 130
           R + YQ  
Sbjct: 320 RPSAYQVA 327


>gi|160947324|ref|ZP_02094491.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
 gi|158446458|gb|EDP23453.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
          Length = 349

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     ++ +++ E P L+T+E     + M+      EIA+ 
Sbjct: 206 MPGSVQEIRYINRDENTHLWLFKKMLLELQNEEPELFTEEKVAVYKDMIKTGVEQEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-E 116
              + +   GL     E Y++++ N R   +    L+  Y E P    W+SE  D    +
Sbjct: 266 KYVLGENIPGLTIQMVEDYIKYLGNLRSTALNFGKLYDGYDEEPESMKWVSEYSDPNAIK 325

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + + Y + + +  D
Sbjct: 326 TDFFEAKPSAYSKSSVIDDD 345


>gi|157164305|ref|YP_001467763.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           concisus 13826]
 gi|112800348|gb|EAT97692.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           concisus 13826]
          Length = 340

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T E + K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFTPETEAKIYDMFEKAGNLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      EQY+ ++ ++R   IGL+  +    +P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEQYIHYLIDQRLVAIGLKRKYNVA-HPIKWVDDFAKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE +VT Y +G+    D
Sbjct: 323 FEAKVTNYSKGSISFDD 339


>gi|296282225|ref|ZP_06860223.1| ribonucleotide-diphosphate reductase subunit beta [Citromicrobium
           bathyomarinum JL354]
          Length = 354

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + ++   E    +TK  ++    +  ++  LE  + 
Sbjct: 178 MKGMGQIVSWSVRDESLHCEGIIRLFHEFVRER-DCYTKAVKEDIIDICQKSVRLEDNFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+ A   ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NF
Sbjct: 237 DLAFEMGPVSGMTAKEIKKYIRYIADWRLGQLGLQPIYMIDEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGAG 132
           FE R TEY +GA 
Sbjct: 297 FEQRATEYSKGAT 309


>gi|56551339|ref|YP_162178.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis ZM4]
 gi|241760992|ref|ZP_04759081.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753042|ref|YP_003225935.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
 gi|56542913|gb|AAV89067.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374611|gb|EER64072.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552405|gb|ACV75351.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 345

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   L TK+ +     +      +E A+ 
Sbjct: 178 MKGMGQIVSWSVRDESLHCEGIIRLFHTFCQERQCL-TKQVKDDILNICQRTVRIEDAFI 236

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+     ++Y+++IA+ R  Q+GL P++   E+P PW++ +++  +  NF
Sbjct: 237 DLVFEMGPVEGMTPKEIKKYIRYIADWRLGQLGLSPIYMIEEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGAG 132
           FETR TEY + A 
Sbjct: 297 FETRSTEYSKAAT 309


>gi|188588149|ref|YP_001919720.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum E3 str. Alaska E43]
 gi|251778737|ref|ZP_04821657.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|188498430|gb|ACD51566.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E3 str. Alaska E43]
 gi|243083052|gb|EES48942.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 344

 Score =  153 bits (388), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL    ++I +++ ENP  +T + + + + M+      EI + 
Sbjct: 206 MPGSAQEIRYINRDENTHLWLFRNIIKELQSENPESFTTDLKNELKEMMRIGVENEILWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK-EKN 118
           H  +     G+N    E Y++++ N+R  +IGL  LF+   ENP  W+  V +    + +
Sbjct: 266 HYVIGDKIQGINKKLIEDYIKYLGNKRLKEIGLGMLFEGFEENPATWVDVVANSNSVKTD 325

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE + T Y + + L  D
Sbjct: 326 FFEAKSTAYAKVSTLIDD 343


>gi|288817346|ref|YP_003431693.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|288786745|dbj|BAI68492.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|308750953|gb|ADO44436.1| ribonucleotide reductase [Hydrogenobacter thermophilus TK-6]
          Length = 342

 Score =  153 bits (388), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    +Q +YI RDE  H+    ++I  IK ENP L+T E ++        AT  EI + 
Sbjct: 206 MRNTVQQIKYINRDELTHVTLFRNIIQTIKQENPELFTPELEKWVYEFFKYATDAEIKWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKN 118
                   +G+N    ++Y++++AN R  Q+G +PL+ + TENP  W+ +   +   + +
Sbjct: 266 QYVTQNQILGINNTLIDRYIKYLANLRLTQLGYKPLYPEITENPMKWIDQFRTINDTKTD 325

Query: 119 FFETRVTEYQQGAGLKW 135
           FF+ +   Y + + LKW
Sbjct: 326 FFQAKPQTYAKRSELKW 342


>gi|229495919|ref|ZP_04389645.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
           endodontalis ATCC 35406]
 gi|229317232|gb|EEN83139.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
           endodontalis ATCC 35406]
          Length = 346

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T E + +   M+ E  L EIA+ 
Sbjct: 206 MPGSVQEIRYINRDENTHLWLFRSMILELRREQPELFTPEREAEFLEMIREGALQEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKK-E 116
              +     GL +     Y+ ++AN R   +GL  +F   E       W+S+  +    +
Sbjct: 266 KYVIGDEIEGLTSQMVSDYIMYLANLRSANLGLGVIFPGHEEEPASMSWVSQYSNSNLIK 325

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + + Y + A ++ D
Sbjct: 326 TDFFEAKPSAYAKSASIEDD 345


>gi|306819883|ref|ZP_07453537.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
 gi|304552130|gb|EFM40067.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
          Length = 347

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     ++ ++K E  H++T+E     R M+ +    EI +A
Sbjct: 207 MPGTVQEIRYINRDENTHLWLFRSILLELKKEEAHIFTQENINLFRNMIKQGVEEEIRWA 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKK-E 116
              +     GL+    E Y++++ N RC  +G + +++  E       W+SE  D    +
Sbjct: 267 KYAIGDNIQGLSMSMIEDYLKYLGNLRCKGLGFDNIYEGYEKEPESMSWVSEYSDPNAIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE +V+ Y +   ++ D
Sbjct: 327 TDFFEAKVSAYAKSTVIEDD 346


>gi|168702494|ref|ZP_02734771.1| ribonucleoside-diphosphate reductase, beta subunit [Gemmata
           obscuriglobus UQM 2246]
          Length = 332

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 45/128 (35%), Positives = 75/128 (58%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F   VI+ ++ E P L+  E + +   ML EA   E A+A +
Sbjct: 196 GLATGTNWVFRDESAHMAFAFRVIDTVRREEPDLFDAELEAQIVAMLREAVECETAFARD 255

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  GL+      Y++++A+RR   +G+ P+F   +NPF +M  + D+++  NFFE 
Sbjct: 256 VLGQGVAGLSLADLRSYLEYVADRRLESLGIAPVF-GAKNPFGFMD-LQDVQELTNFFER 313

Query: 123 RVTEYQQG 130
           RV+ YQ G
Sbjct: 314 RVSAYQLG 321


>gi|223039245|ref|ZP_03609535.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
 gi|222879606|gb|EEF14697.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
          Length = 340

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T E + K   M   A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRTERPDLFTSEMEAKIYDMFKRAGELEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      EQY++++ ++R   IGL+  +    +P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEQYIRYLIDQRLVAIGLKRRYD-ARHPIKWVDDFAKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE +VT Y +G+    D
Sbjct: 323 FEAKVTNYSKGSISFDD 339


>gi|294013210|ref|YP_003546670.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
 gi|292676540|dbj|BAI98058.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
          Length = 351

 Score =  153 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    + + +    E   L T   +     M  +   +E A+ 
Sbjct: 178 MKGMGQIVSWSVRDETLHCEGIVRLFHAFVKERDCL-TASVKDDIMDMCQKTVRIEDAFV 236

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+     ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NF
Sbjct: 237 DLVFEMGPVPGMTPKDIKKYVRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGAG 132
           FETR TEY + A 
Sbjct: 297 FETRATEYSKAAT 309


>gi|297736972|emb|CBI26173.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  153 bits (387), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 9/114 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ + P        QK   ++HEA  +E  + 
Sbjct: 159 MPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPW-------QKVHHIVHEAVEIETQFV 211

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK 114
            E +P   +G+NA    QY++F+A+R    +G E  +   ENPF WM E I L+
Sbjct: 212 CEALPCALIGMNATLMSQYIKFVADRLLVALGYERKYN-VENPFDWM-EFISLQ 263


>gi|167627842|ref|YP_001678342.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597843|gb|ABZ87841.1| Ribonucleoside-diphosphate reductase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 410

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   +F+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFI 327

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   ++Y++ I +RR +Q+GL  ++   +NP  W+  +++     NF
Sbjct: 328 DLAYEIGTIEGLKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGA-GLKWD 136
           FE RVTEY+       WD
Sbjct: 388 FENRVTEYEVAGLTGNWD 405


>gi|327312835|ref|YP_004328272.1| ribonucleoside-diphosphate reductase subunit beta [Prevotella
           denticola F0289]
 gi|326946303|gb|AEA22188.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola F0289]
          Length = 348

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A++ +YI RDE+ HL     +I ++K E P ++T +  +    M+ E    EIA+ 
Sbjct: 208 MSGSAQEIRYINRDENTHLWLFRSIILELKKEEPDMFTSDKIKVYEDMMREGVRQEIAWG 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLKK-E 116
              +     GLN      Y++++ N R   +G   L+    + P    W+ +  +    +
Sbjct: 268 QYVIGNDVQGLNEQMVSDYIRYLGNLRWSGLGFGFLYDDNRKEPENMKWVGQYSNANMVK 327

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y +   L  D
Sbjct: 328 TDFFEAKSTAYAKSTALVDD 347


>gi|45268714|dbj|BAD12266.1| p53-inducible ribonucleotide reductase small subunit 2 short form
           gamma [Homo sapiens]
          Length = 139

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 9/120 (7%)

Query: 14  DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNA 73
           DE LH +F   +         +L  K  +++ R ++ +A  +E  +  E +P G +G+N 
Sbjct: 15  DEGLHCDFACLMFQ-------YLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNC 67

Query: 74  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGL 133
              +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFFE RV+EYQ+ A +
Sbjct: 68  ILMKQYIEFVADRLLVELGFSKVFQ-AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAVM 125


>gi|241668401|ref|ZP_04755979.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876934|ref|ZP_05249644.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254842955|gb|EET21369.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
          Length = 410

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDES+H+     +      ENP++   +F+++   M  +A  LE  + 
Sbjct: 268 MKGMGKVVEWSIRDESMHVEGNAALFRIYCQENPYIVDNQFKKEIYLMASKAVELEDKFI 327

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   ++Y++ I +RR +Q+GL  ++   +NP  W+  +++     NF
Sbjct: 328 DLAYEIGTIEGLKADEVKEYIRHITDRRLNQLGLNEIYNIDKNPLTWLEWILNGADHTNF 387

Query: 120 FETRVTEYQQGA-GLKWD 136
           FE RVTEY+       WD
Sbjct: 388 FENRVTEYEVAGLTGNWD 405


>gi|295836584|ref|ZP_06823517.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
 gi|197697282|gb|EDY44215.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
          Length = 345

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 79/136 (58%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  E +Q+ + ML  A   E+ +A +
Sbjct: 209 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDAELEQEVKDMLDGAVNAELQFARD 268

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE 
Sbjct: 269 LCGDGLPGMNTESMREYLQCVADQRLQRLGFAPVY-GSSNPFSFM-ELQGVQELTNFFER 326

Query: 123 RVTEYQQG--AGLKWD 136
           R + YQ      + +D
Sbjct: 327 RPSAYQVAVEGSVSFD 342


>gi|229827460|ref|ZP_04453529.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
 gi|229788398|gb|EEP24512.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
          Length = 354

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++  ENP ++T E + + R M+   TL EI + 
Sbjct: 214 MTATSTIFKYINRDEITHLVLFQNIIRELMKENPEIFTDELKGELREMVKVGTLNEIEWG 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +G+N    E+Y+++++N R   IGL   F + TENP  W+    +L   + +
Sbjct: 274 QYVTNNEILGINNELIERYIKYLSNLRLRAIGLPVWFPEITENPMAWIESFSNLNATKTD 333

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 334 FFEAKVTNYTKAAAFDFD 351


>gi|103487260|ref|YP_616821.1| ribonucleotide-diphosphate reductase subunit beta [Sphingopyxis
           alaskensis RB2256]
 gi|98977337|gb|ABF53488.1| Ribonucleoside-diphosphate reductase [Sphingopyxis alaskensis
           RB2256]
          Length = 354

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   L TK  ++       +   LE A+ 
Sbjct: 178 MKGMGQIVSWSIRDESLHCEGIIKLFHAFTKERGCL-TKAVKEDIIDTCQKTVRLEDAFI 236

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                +G   G+     ++Y+++IA+ R  Q+G +P++   E+P PW++ +++  +  NF
Sbjct: 237 DLAFEQGPVPGMTPKEIKRYIRYIADWRLGQLGFQPIYMIDEHPLPWLAPLLNGVEHANF 296

Query: 120 FETRVTEYQQGAG 132
           FETR TEY +GA 
Sbjct: 297 FETRATEYSKGAT 309


>gi|330814259|ref|YP_004358498.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487354|gb|AEA81759.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 345

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 1/133 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH N  I + N    ENP L     +++           E A+ 
Sbjct: 201 MKGMGQIVTWSVRDETLHCNSMIKIFNTFCDENPGLLDDSLKKEIYEACSTIIEHEDAFI 260

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   ++Y+++IANRR  Q+ L  L++  ENP  W+ ++++  +  NF
Sbjct: 261 DLAFEMGDIEGLKAEEVKKYIRWIANRRLAQLRLNDLYEVKENPLTWLDDMLNGVEHMNF 320

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + + 
Sbjct: 321 FEGRATEYSKAST 333


>gi|299144102|ref|ZP_07037182.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298518587|gb|EFI42326.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 346

 Score =  152 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL    ++I ++K E   L+T+E   + + ML E    EI + 
Sbjct: 206 MPGTVQEIRYINRDENTHLWLFRNIIQELKKEEVELFTEERINEYKCMLMEGVRQEIEWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-E 116
              +     G+ A   + Y++++ N R   IG   LF       N   W+SE  +  + +
Sbjct: 266 QYVIGDNIQGITAQMVKDYIEYLGNLRSRSIGFGNLFDRNIEEPNSMKWVSEYSNPNEIK 325

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE +V+ Y + +  + D
Sbjct: 326 TDFFEGKVSAYSKSSVFEDD 345


>gi|256391238|ref|YP_003112802.1| ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
 gi|256357464|gb|ACU70961.1| Ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
          Length = 331

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/136 (36%), Positives = 80/136 (58%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DV++ ++ E P L+ ++  Q+ R ML EA   E  +A +
Sbjct: 195 GLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDEKMAQQVREMLAEAVECETQFAGD 254

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL       Y++ +A+RR  Q+GLEP++  T NP  +M E+ D+++  NFFE 
Sbjct: 255 LLGGGVSGLPVADMRAYLEHVADRRLEQLGLEPMY-GTANPLGFM-ELQDVQELSNFFER 312

Query: 123 RVTEYQ--QGAGLKWD 136
           RV+ YQ   G  + +D
Sbjct: 313 RVSAYQVAVGGSVSFD 328


>gi|299472857|emb|CBN80426.1| EsV-1-128 [Ectocarpus siliculosus]
          Length = 419

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 9/132 (6%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            G++     I RDE LH    + +   ++ + P       Q++   +   A  +E  +  
Sbjct: 283 KGLSFANSLIARDEGLHATASVLIYKHLRNKLP-------QERVHEIFEHAVSVECEFIS 335

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
             +P   +G++  S  +Y++F+A+   +Q+G + ++    NPF WM  +I L+ + NFFE
Sbjct: 336 SALPVALIGISEKSMTEYIKFVADYWLNQLGYDKVYNCA-NPFEWMD-MISLQGKTNFFE 393

Query: 122 TRVTEYQQGAGL 133
            RV EY +   L
Sbjct: 394 NRVAEYSKPGVL 405


>gi|114568952|ref|YP_755632.1| ribonucleotide-diphosphate reductase subunit beta [Maricaulis maris
           MCS10]
 gi|114339414|gb|ABI64694.1| Ribonucleoside-diphosphate reductase [Maricaulis maris MCS10]
          Length = 345

 Score =  152 bits (385), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   L T+E +            LE  + 
Sbjct: 186 MKGMGQIVTWSIRDESLHCEGMIKLFHAFAEETGAL-TQEVKDDITECCRTVVGLEDKFI 244

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+     + Y+++IA+ R  Q+GL  ++   E+P PW+SE+++  +  NF
Sbjct: 245 DLAFEAGDVEGMTPDDIKTYIRYIADWRLGQLGLPKIYGVKEHPLPWLSEILNGVEHANF 304

Query: 120 FETRVTEYQQGAG 132
           FE R TEY +GA 
Sbjct: 305 FEARATEYSKGAT 317


>gi|311696539|gb|ADP99412.1| ribonucleotide-diphosphate reductase beta subunit [marine bacterium
           HP15]
          Length = 352

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/135 (42%), Positives = 78/135 (57%), Gaps = 3/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  EQ QYI+RDE++H +FG+ V+NQI  E    +     +  R M  E+   E AYA
Sbjct: 221 MRGTGEQLQYILRDEAMHFSFGLKVVNQIVEEENITFDP---KAVREMWDESEAAEKAYA 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +    +G +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNFF
Sbjct: 278 DYILRDPILGYSAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFF 337

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ GA L+W
Sbjct: 338 ETRVIEYQTGAQLEW 352


>gi|169824933|ref|YP_001692544.1| ribonucleotide-diphosphate reductase subunit beta [Finegoldia magna
           ATCC 29328]
 gi|167831738|dbj|BAG08654.1| ribonucleoside-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 29328]
          Length = 354

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A
Sbjct: 214 MPGTVQEIRYINRDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWA 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENP-FPWMSEVIDLKK-E 116
              + +   GL+    E Y++++ N R   +G   ++     E P   W+SE  D  K +
Sbjct: 274 KYVIGEKIQGLSIKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIK 333

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + + Y + A ++ D
Sbjct: 334 TDFFEAKPSAYSKSAIIEDD 353


>gi|120556760|ref|YP_961111.1| ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
 gi|120326609|gb|ABM20924.1| Ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
          Length = 352

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/135 (42%), Positives = 79/135 (58%), Gaps = 3/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  EQ QYI+RDE++H +FG+ V+NQI  E          +  R M  E+   E+AYA
Sbjct: 221 MRGTGEQLQYILRDEAMHFSFGLKVVNQILEEEKITLDP---KAVREMWDESEAAEMAYA 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           +  +    +G +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNFF
Sbjct: 278 NYVLRDPILGYSAEYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFF 337

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ GA L+W
Sbjct: 338 ETRVIEYQTGAQLEW 352


>gi|13242599|ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus 1]
 gi|13177402|gb|AAK14546.1|AF204951_128 EsV-1-128 [Ectocarpus siliculosus virus 1]
          Length = 419

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 9/132 (6%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            G++     I RDE LH    + +   +K   P       +++   +   A  +E  +  
Sbjct: 283 KGLSFANSLIARDEGLHATASVLIYKHLKNRLP-------RERVHEIFKHAVSVECEFIS 335

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
             +P   +G++  S  +Y++F+A+   +Q+G + ++    NPF WM  +I L+ + NFFE
Sbjct: 336 SALPVALIGISEKSMTEYIKFVADYWLNQLGYDKVYNCA-NPFEWMD-MISLQGKTNFFE 393

Query: 122 TRVTEYQQGAGL 133
            RV EY +   L
Sbjct: 394 NRVAEYSKPGVL 405


>gi|167648664|ref|YP_001686327.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter sp.
           K31]
 gi|167351094|gb|ABZ73829.1| Ribonucleoside-diphosphate reductase [Caulobacter sp. K31]
          Length = 346

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E     T E             ++E A+ 
Sbjct: 186 MKGMGQIVSWSIRDESLHCEGIIKLYHAFNAET-KCVTPEVAADIVECCKSVVIMEDAFI 244

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NF
Sbjct: 245 DLAFEAGEIQGMTPHDIKQYIRFIADWRLRQLHLPEVYGIKENPLPWLQSLLSGVEHANF 304

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 305 FEARATEYSKAAT 317


>gi|85710107|ref|ZP_01041172.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
 gi|85688817|gb|EAQ28821.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
          Length = 346

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    I + +    E   L TK  ++    +  +   LE A+ 
Sbjct: 178 MKGMGQIVSWSVRDETLHCEGIIKMFHTFCEERDCL-TKAVKEDIIDICQKTVRLEDAFI 236

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+ A   ++Y+++IA+ R  Q+ L+P++   E+P PW+S +++  +  NF
Sbjct: 237 DLAFEMGPVEGMTAKDIKKYIRYIADWRLGQLNLQPIYMIDEHPLPWLSPLLNGVEHANF 296

Query: 120 FETRVTEYQQGAG 132
           FE R TEY +GA 
Sbjct: 297 FEARATEYSKGAT 309


>gi|302379704|ref|ZP_07268189.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
 gi|302312611|gb|EFK94607.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
          Length = 347

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A
Sbjct: 207 MPGTVQEIRYINRDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWA 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENP-FPWMSEVIDLKK-E 116
              + +   GL+    E Y++++ N R   +G   ++     E P   W+SE  D  K +
Sbjct: 267 KYVIGEKIQGLSIKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + + Y + A ++ D
Sbjct: 327 TDFFEAKPSAYSKSAIIEDD 346


>gi|313887688|ref|ZP_07821370.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312846297|gb|EFR33676.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 346

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G   + +YI RDE+ HL     +I ++K E P ++T E  +K + ML +    EIA+ 
Sbjct: 206 MPGTVSEIRYINRDENTHLWLFRSIILEMKKEEPEIFTDENIEKYKEMLKKGVEEEIAWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKK-E 116
              +     GLN    E Y+ ++ N R   +G   LF           W+SE  D  + +
Sbjct: 266 KYVIGDEIKGLNEKMIEDYIMYLGNLRSRNLGFGNLFDENIDEPESMKWVSEYSDPNQIK 325

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R + Y + + ++ D
Sbjct: 326 TDFFEARPSAYSKSSVIEDD 345


>gi|303234233|ref|ZP_07320879.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
 gi|302494774|gb|EFL54534.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
          Length = 347

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I  +K E P L+T+E   + + M+ +    EI +A
Sbjct: 207 MPGTVQEIRYINRDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGAEAEIEWA 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENP-FPWMSEVIDLKK-E 116
              + +   GL+    E Y++++ N R   +G   ++     E P   W+SE  D  K +
Sbjct: 267 KYVIGEKIQGLSIKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + + Y + A ++ D
Sbjct: 327 TDFFEAKPSAYSKSAIIEDD 346


>gi|303389600|ref|XP_003073032.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
           intestinalis ATCC 50506]
 gi|303302176|gb|ADM11672.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
           intestinalis ATCC 50506]
          Length = 326

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 10/130 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH  F   +  +          K+  ++ + ++ +A  +E  + 
Sbjct: 190 MPGLTFSNELISRDEGLHCEFACLLHRRYL--------KQKCKRVKEVVMDAVEVEKRFL 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     +Y++F+A+     +  E ++ +T NPF +M E I L  + NFF
Sbjct: 242 SESLPVDLIGMNCQLMCKYIEFVADTLLENLEEEKIY-HTPNPFDFM-ENISLVGKTNFF 299

Query: 121 ETRVTEYQQG 130
           + R ++YQ+ 
Sbjct: 300 DKRESQYQKA 309


>gi|268678691|ref|YP_003303122.1| ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268616722|gb|ACZ11087.1| Ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 340

 Score =  151 bits (383), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 3/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN  K E P L+T   + K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINTTKKERPDLFTDALKAKVYEMFQKAGDLEIEWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNF 119
                   +G      E Y+ ++ + R   +G + L+    +P  W+ +       + NF
Sbjct: 264 KYITQNQIMGFTDDIIETYIHYLVDDRLTAVGFDKLYN-ASHPIKWVDDFSKFNDQKTNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE  V+ Y +G+ L +D
Sbjct: 323 FEGNVSNYSKGS-LSFD 338


>gi|57505748|ref|ZP_00371674.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
 gi|57016021|gb|EAL52809.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
          Length = 340

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+ ++   K  +M   A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLIAINLDKIYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE++VT Y +G+    D
Sbjct: 323 FESKVTNYSKGSISFDD 339


>gi|302381236|ref|YP_003817059.1| ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302191864|gb|ADK99435.1| Ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 348

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH +  I + +    E   + TK               LE  + 
Sbjct: 189 MKGMGQIVSWSVRDESLHCDGIIKLYHAFNKETG-VVTKAVADDIVQCCETVVGLEDKFI 247

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G + G+     +QY++FIA+ R  Q+ L  L+   ENP PW+  ++   +  NF
Sbjct: 248 DLAFEAGEINGMTPEDIKQYIRFIADWRLRQLKLPELYGVKENPLPWLQSLLSGVEHANF 307

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 308 FEARATEYSKAAT 320


>gi|283955349|ref|ZP_06372848.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283793109|gb|EFC31879.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 340

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE++VT Y +G+    D
Sbjct: 323 FESKVTNYSKGSISFDD 339


>gi|302867100|ref|YP_003835737.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315506490|ref|YP_004085377.1| ribonucleotide reductase [Micromonospora sp. L5]
 gi|302569959|gb|ADL46161.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315413109|gb|ADU11226.1| ribonucleotide reductase [Micromonospora sp. L5]
          Length = 342

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/136 (33%), Positives = 83/136 (61%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DV+  ++ E P L+  E +++ + ML EA   E+++A +
Sbjct: 206 GLASGTNWVFRDESMHMAFAFDVVETVRAEEPDLFDDEMERQVKEMLAEAVECEVSFAED 265

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  G++     +Y+Q +A+RR   +G+ P++  + NPF +M E+ D+++  NFFE 
Sbjct: 266 LLGQGVPGMSLADMREYLQHVADRRLAVLGIAPMY-GSGNPFAFM-ELQDVQELSNFFER 323

Query: 123 RVTEYQQG--AGLKWD 136
           RV+ YQ G    + +D
Sbjct: 324 RVSAYQVGVTGSVTFD 339


>gi|86149605|ref|ZP_01067835.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|86151167|ref|ZP_01069382.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|86153704|ref|ZP_01071907.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|88597173|ref|ZP_01100408.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|121613260|ref|YP_999944.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|157414529|ref|YP_001481785.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|167004901|ref|ZP_02270659.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|218561895|ref|YP_002343674.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|283955655|ref|ZP_06373148.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|315123818|ref|YP_004065822.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|85839873|gb|EAQ57132.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|85841514|gb|EAQ58761.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85842665|gb|EAQ59877.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|87250215|gb|EAQ73173.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|88190234|gb|EAQ94208.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112359601|emb|CAL34386.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|157385493|gb|ABV51808.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|283792880|gb|EFC31656.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|284925507|gb|ADC27859.1| ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni IA3902]
 gi|307747171|gb|ADN90441.1| Ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315017540|gb|ADT65633.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|315928159|gb|EFV07477.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni DFVF1099]
 gi|315932030|gb|EFV10983.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 340

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE++VT Y +G+    D
Sbjct: 323 FESKVTNYSKGSISFDD 339


>gi|318060206|ref|ZP_07978929.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actG]
 gi|318077113|ref|ZP_07984445.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actF]
          Length = 345

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 78/136 (57%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + + + + ML  A   E+ +A +
Sbjct: 209 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARD 268

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE 
Sbjct: 269 LCGDGLPGMNTESMREYLQCVADQRLVRLGFSPVY-GSSNPFSFM-ELQGVQELTNFFER 326

Query: 123 RVTEYQQG--AGLKWD 136
           R + YQ      + +D
Sbjct: 327 RPSAYQVAVEGSVSFD 342


>gi|302521843|ref|ZP_07274185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
 gi|302430738|gb|EFL02554.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
          Length = 345

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 78/136 (57%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H++F  DV++ ++ E P L+  + + + + ML  A   E+ +A +
Sbjct: 209 GLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDKLEAEVKEMLAGAVDAELQFARD 268

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y+Q +A++R  ++G  P++  + NPF +M E+  +++  NFFE 
Sbjct: 269 LCGDGLPGMNTESMREYLQCVADQRLVRLGFSPVY-GSSNPFSFM-ELQGVQELTNFFER 326

Query: 123 RVTEYQQG--AGLKWD 136
           R + YQ      + +D
Sbjct: 327 RPSAYQVAVEGSVSFD 342


>gi|85375147|ref|YP_459209.1| ribonucleotide-diphosphate reductase subunit beta [Erythrobacter
           litoralis HTCC2594]
 gi|84788230|gb|ABC64412.1| ribonucleotide reductase beta subunit [Erythrobacter litoralis
           HTCC2594]
          Length = 356

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 72/133 (54%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    + + ++   E    +TK  ++    +  ++  LE  + 
Sbjct: 178 MKGMGQIVSWSVRDESLHCEGIVRLFHEFVRER-DCYTKAVKEDIIDICQKSVRLEDNFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     ++Y+++IA+ R  Q+GL+P++   ++P PW++ +++  +  NF
Sbjct: 237 DLAFEMGPVSGMTPKEIKKYIRYIADWRLGQLGLQPIYMVDDHPLPWLAPLLNGVEHANF 296

Query: 120 FETRVTEYQQGAG 132
           FE R TEY +GA 
Sbjct: 297 FEQRATEYSKGAT 309


>gi|330467634|ref|YP_004405377.1| ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
 gi|328810605|gb|AEB44777.1| Ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
          Length = 342

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 47/128 (36%), Positives = 79/128 (61%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DV++ ++ E P L+  E +Q+ R ML EA   E+ +A +
Sbjct: 206 GLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDAEMEQQVRDMLAEAVDCEVQFAAD 265

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  G+      QY+Q +A+RR   +G+ P++  + NPF +M E+ D+++  NFFE 
Sbjct: 266 LLEQGVSGMPLADMRQYLQHVADRRLAMLGIAPMY-GSTNPFAFM-ELQDVQELSNFFER 323

Query: 123 RVTEYQQG 130
           RV+ YQ G
Sbjct: 324 RVSAYQVG 331


>gi|205356539|ref|ZP_03223302.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205345544|gb|EDZ32184.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 340

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE++VT Y +G+    D
Sbjct: 323 FESKVTNYSKGSISFDD 339


>gi|225873704|ref|YP_002755163.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791613|gb|ACO31703.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
          Length = 340

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 2/130 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES HL F  +V+N ++ + P LW  + +     MLHEA   E  +A +
Sbjct: 204 GLASGTNWVFRDESCHLEFAFEVVNVVRSQEPDLWDAQLEADIVEMLHEAVDAETQFAED 263

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL+     QY+ ++A+ R  ++G+ P F   +NPF +M E+ D+++  NFFE 
Sbjct: 264 LLSGGVAGLSVRDMRQYLGYVADSRLQRLGIAPAF-GVKNPFSFM-ELQDVQELTNFFER 321

Query: 123 RVTEYQQGAG 132
           RV+ YQ    
Sbjct: 322 RVSAYQTAVA 331


>gi|197103810|ref|YP_002129187.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
 gi|196477230|gb|ACG76758.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
          Length = 350

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E     T+               LE  + 
Sbjct: 190 MKGMGQIVSWSVRDESLHCEGIIKLYHAFNKETG-AVTQAVADDIVDCCKTVVGLEDKFI 248

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NF
Sbjct: 249 DLAFEAGEVQGMTPDDIKQYIRFIADWRLKQLHLPQVYGIKENPLPWLQSMLSGVEHANF 308

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 309 FEARATEYSKAAT 321


>gi|254418345|ref|ZP_05032069.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
 gi|196184522|gb|EDX79498.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
          Length = 349

 Score =  151 bits (382), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E     TK               +E  + 
Sbjct: 190 MKGMGQIVSWSVRDESLHCEGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVVNMEDRFI 248

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+     +QY++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NF
Sbjct: 249 DLAFEMGSVQGMTPEDIKQYIRFIADWRLRQLKLPEVYGVKENPLPWLQSLLSGVEHANF 308

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 309 FEARATEYSKAAT 321


>gi|57237291|ref|YP_178304.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni RM1221]
 gi|148926379|ref|ZP_01810063.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|57166095|gb|AAW34874.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni RM1221]
 gi|145844771|gb|EDK21876.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|315057661|gb|ADT71990.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 340

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE++VT Y +G+    D
Sbjct: 323 FESKVTNYSKGSISFDD 339


>gi|154174558|ref|YP_001409201.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           curvus 525.92]
 gi|112803525|gb|EAU00869.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           curvus 525.92]
          Length = 340

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 3/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+T E ++K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRAERSDLFTPEMEEKIYDMFEKAGNLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   IGL+  +   ++P  W+ +      +K NF
Sbjct: 264 RYITQNQIMGFTDDIIEEYIHYLVDQRLVAIGLKRKYN-AKHPIKWVDDFAKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE++VT Y +G+ L +D
Sbjct: 323 FESKVTNYSKGS-LSFD 338


>gi|293401949|ref|ZP_06646089.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304607|gb|EFE45856.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 347

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I +++ E P L+T    ++ + ML      EI + 
Sbjct: 207 MPGSVQEIRYINRDENTHLWLFRSMILELQKEEPQLFTPALVEEYKDMLRYGVEEEIRWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENP--FPWMSEVIDLKK-E 116
              +     GL      +Y+ ++ N R   +G   L++ Y + P    W+S   +    +
Sbjct: 267 SYVIGNDIEGLTMQMVREYIYYLGNLRSTSLGFGTLYEGYEKEPASMEWVSMYANANLIK 326

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE R + Y + + L  D
Sbjct: 327 TDFFEARSSAYAKSSALVDD 346


>gi|254293199|ref|YP_003059222.1| ribonucleotide-diphosphate reductase subunit beta [Hirschia baltica
           ATCC 49814]
 gi|254041730|gb|ACT58525.1| Ribonucleoside-diphosphate reductase [Hirschia baltica ATCC 49814]
          Length = 345

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    + + +    E   L TK  +            LE  + 
Sbjct: 187 MKGMGQIVSWSVRDESLHCEGMMKMFHTYAEETGAL-TKTVKDDITDCCQTVVKLEDKFI 245

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+     + Y+++IA+ R  Q+ L+P++   E+P PW++E+++  +  NF
Sbjct: 246 DLAFEAGEVEGMTPEDIKNYIRYIADWRLKQLKLDPVYGVDEHPIPWLTEILNGVEHANF 305

Query: 120 FETRVTEYQQGAG 132
           FE R TEY +GA 
Sbjct: 306 FEARATEYSKGAT 318


>gi|159040364|ref|YP_001539617.1| ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
 gi|157919199|gb|ABW00627.1| Ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
          Length = 350

 Score =  150 bits (381), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 45/136 (33%), Positives = 83/136 (61%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DV++ I+ E P L+  + +++ + M+ EA   E  +A +
Sbjct: 214 GLASGTNWVFRDESMHMAFAFDVVDTIRAEEPDLFDADLERQIKDMVTEAVDCEAQFAED 273

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  GL+     +Y+Q +A+RR   +G+ P++  ++NPF +M E+ D+++  NFFE 
Sbjct: 274 LLEQGVSGLSLADMREYLQHVADRRLVTLGIAPIY-GSQNPFAFM-ELQDVQELSNFFER 331

Query: 123 RVTEYQQG--AGLKWD 136
           RV+ YQ G    + +D
Sbjct: 332 RVSAYQVGVSGSVTFD 347


>gi|308490921|ref|XP_003107652.1| hypothetical protein CRE_13354 [Caenorhabditis remanei]
 gi|308250521|gb|EFO94473.1| hypothetical protein CRE_13354 [Caenorhabditis remanei]
          Length = 147

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 9/127 (7%)

Query: 8   YQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG 67
             Y  RDE LH +F   + + ++        K  Q++   ++ +A  +E  +  E +P  
Sbjct: 17  INYFFRDEGLHRDFACLLYSMLQ-------NKLTQERIFEIIKDAVCIEQEFLTEALPVD 69

Query: 68  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 127
            +G+N     QY++F+A+    ++G + L+   +NPF +M E I +  + NFFE RV+EY
Sbjct: 70  MIGMNCRLMSQYIEFVADHLLAELGCDKLYN-VKNPFDFM-ENISIDGKTNFFEKRVSEY 127

Query: 128 QQGAGLK 134
           Q+   + 
Sbjct: 128 QRPGVMS 134


>gi|57168357|ref|ZP_00367491.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|305432773|ref|ZP_07401932.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
 gi|57020165|gb|EAL56839.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|304444170|gb|EFM36824.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
          Length = 340

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+ +    K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFNENNINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLVAINLDKIYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE++VT Y +G+    D
Sbjct: 323 FESKVTNYSKGSISFDD 339


>gi|295691241|ref|YP_003594934.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
 gi|295433144|gb|ADG12316.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
          Length = 346

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH +  I + +    E     TK               LE  + 
Sbjct: 187 MKGMGQIVSWSIRDESLHCDGIIKLYHAFNKETG-AVTKAVADDIVDCCKHVVGLEDKFI 245

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+     + Y++FIA+ R  Q+ L  ++   ENP PW+  ++   +  NF
Sbjct: 246 DLAFEAGEIQGMTPDDIKSYIRFIADWRLRQLQLPEVYGVKENPLPWLQSLLSGVEHANF 305

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 306 FEARATEYSKAAT 318


>gi|149375674|ref|ZP_01893443.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
 gi|149360076|gb|EDM48531.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
          Length = 352

 Score =  150 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/135 (42%), Positives = 78/135 (57%), Gaps = 3/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  EQ QYI+RDE++H +FG+ V+NQI  E          +  R M  E+   E AYA
Sbjct: 221 MRGTGEQLQYILRDEAMHFSFGLKVVNQILEEENITLDP---KAVRDMWDESEAAETAYA 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           +  +    +G +A    +  +F+ANRR   +GLE  F   +N  PW+ E   L+KEKNFF
Sbjct: 278 NYILRDPILGYSAQYHSEQFRFVANRRARTVGLEEPFPGAKNVSPWLDEQATLRKEKNFF 337

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ GA L+W
Sbjct: 338 ETRVIEYQTGAQLEW 352


>gi|153952438|ref|YP_001397460.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939884|gb|ABS44625.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 340

 Score =  150 bits (380), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN +  E P L+  E   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVHKERPDLFHDENINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ L+   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE++VT Y +G+    D
Sbjct: 323 FESKVTNYSKGSISFDD 339


>gi|15613065|ref|NP_241368.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
 gi|14195134|sp|Q9KFH7|RIR2_BACHD RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10173115|dbj|BAB04221.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
          Length = 345

 Score =  150 bits (380), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE LH+    ++  ++ +E P L T+E +   +T L +A  LE  + 
Sbjct: 205 MVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWF 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLK-KEKN 118
              +     G+N    E Y+ FIAN+R  Q+G+E  +   + NP  W+    D+   + +
Sbjct: 265 RYIIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSD 324

Query: 119 FFETRVTEYQQGAG 132
           FFE +  +Y + + 
Sbjct: 325 FFEQKSRQYAKVSA 338


>gi|297587320|ref|ZP_06945965.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
 gi|297575301|gb|EFH94020.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
          Length = 354

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     +I  +K E P L+T+E   + + M+ + +  EI +A
Sbjct: 214 MPGTVQEIRYINRDENTHLWLFRSMILDLKKERPELFTEEKNAQYKEMIKQGSEAEIEWA 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENP-FPWMSEVIDLKK-E 116
              + +   GL+    E Y++++ N R   +G   ++     E P   W+SE  D  K +
Sbjct: 274 KYVIGEKIQGLSIKMVEDYIKYLGNLRSTGLGFGVIYPGYEREIPSMKWVSEYSDPNKIK 333

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + + Y + A ++ D
Sbjct: 334 TDFFEAKPSAYSKSAIIEDD 353


>gi|148554425|ref|YP_001262007.1| ribonucleotide-diphosphate reductase subunit beta [Sphingomonas
           wittichii RW1]
 gi|148499615|gb|ABQ67869.1| Ribonucleoside-diphosphate reductase [Sphingomonas wittichii RW1]
          Length = 350

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH    + + +    E   L T   +     M  +   +E A+ 
Sbjct: 178 MKGMGQIVTWSIRDETLHCEGIVRLFHAFVKERDCL-TASVKDDILDMCQKTVRIEDAFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     ++Y+++IA+ R  Q+GL+P++   ++P PW++ +++  +  NF
Sbjct: 237 DLVFEMGPVNGMTPKDIKKYVRYIADWRLGQLGLKPIYMIEDHPLPWLAPLLNGVEHANF 296

Query: 120 FETRVTEYQQGAG 132
           FETR TEY + A 
Sbjct: 297 FETRATEYSKAAT 309


>gi|87198296|ref|YP_495553.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87133977|gb|ABD24719.1| Ribonucleoside-diphosphate reductase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 351

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH      + +    E   L TK  ++       +   LE A+ 
Sbjct: 178 MKGMGQIVSWSVRDESLHCEGITRLFHAFVKERGCL-TKAVKEDIIDCCQKTVRLEDAFI 236

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                +G   G++A   ++Y+++IA+ R  Q+GL  ++   ++P PW++ +++  +  NF
Sbjct: 237 DLAFEQGPVPGMSAKEIKRYIRYIADWRLSQLGLPAIYMIEDHPLPWLAPLLNGVEHANF 296

Query: 120 FETRVTEYQQGAG 132
           FETR TEY + A 
Sbjct: 297 FETRATEYSKAAT 309


>gi|315497476|ref|YP_004086280.1| ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
 gi|315415488|gb|ADU12129.1| Ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
          Length = 350

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E     TK               LE  + 
Sbjct: 189 MKGMGQIVSWSVRDESLHCEGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVVSLEDKFI 247

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
             +   G   G+     +QY+++IA+ R  Q+ L  +F   ENP PW+  ++   +  NF
Sbjct: 248 DLSFEMGPVEGMTPDDIKQYIRYIADWRLRQLELPEVFGVQENPLPWLQVLLSGVEHANF 307

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 308 FEARATEYSKAAT 320


>gi|291303011|ref|YP_003514289.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572231|gb|ADD45196.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 338

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 39/130 (30%), Positives = 74/130 (56%), Gaps = 2/130 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+NF   V++ ++ E P L+  E  +    M+ EA   E+ +A +
Sbjct: 202 GLATGTNWVFRDESCHMNFAFSVVDVVRNEEPELFDDELTEAVTRMIEEAVAAELQFARD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+     + Y++++A++R  ++G+   +  ++NPF +M+ + D+++  NFFE 
Sbjct: 262 LCGEGMPGMTVNDMKSYLEYVADQRLTRLGMPVRY-GSKNPFGFMA-LQDVQELTNFFER 319

Query: 123 RVTEYQQGAG 132
           R T YQ   G
Sbjct: 320 RPTAYQVAVG 329


>gi|154149104|ref|YP_001405803.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           hominis ATCC BAA-381]
 gi|153805113|gb|ABS52120.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           hominis ATCC BAA-381]
          Length = 340

 Score =  150 bits (379), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 3/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+  +   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFNDKNIAKIYEMFEKAGELEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +GL     E+Y+ ++ + R   IGL   +    +P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGLTDEIIEEYIHYLVDNRLSAIGLNKKYN-ARHPIKWVDDFAKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE++VT Y +G+ L +D
Sbjct: 323 FESKVTNYSKGS-LNFD 338


>gi|315637824|ref|ZP_07893014.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
 gi|315482065|gb|EFU72679.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
          Length = 340

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+ ++   K  +M   A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFNEQNIDKIYSMFKRAGELEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLIAINLDRIYN-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE++VT Y +G+    D
Sbjct: 323 FESKVTNYSKGSISFDD 339


>gi|115378653|ref|ZP_01465803.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364319|gb|EAU63404.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 288

 Score =  150 bits (379), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F  + I   + E P L+    Q     M+ EA   E  +A +
Sbjct: 148 GLAAGTNWVFRDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQD 207

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL+     QY++++A++R   +GL P+F+  +N  P+M  + D+++  NFFE 
Sbjct: 208 LLSGGVAGLSVQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFMD-LQDVQELTNFFER 265

Query: 123 RVTEYQQGAGL 133
           RV+ YQ   G+
Sbjct: 266 RVSAYQVAVGV 276


>gi|254449372|ref|ZP_05062814.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
 gi|198261018|gb|EDY85321.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
          Length = 404

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 59/135 (43%), Positives = 74/135 (54%), Gaps = 3/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ QYIMRDE +H +FG+ V  QI  E          +  R M  E    E  YA
Sbjct: 273 MKGTAEQLQYIMRDEVMHASFGLRVARQIMREENIQPDP---KAMREMWDECEAAEEGYA 329

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +    +G +A       +FIANRR +++ LE  F   EN  PW+ E  +++KEKNFF
Sbjct: 330 RYLLRDPILGYSAEDHVNQFRFIANRRANKLSLEEPFPGAENALPWLDEQANMRKEKNFF 389

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVTEYQ G GL W
Sbjct: 390 ETRVTEYQVGGGLTW 404


>gi|149185037|ref|ZP_01863354.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
 gi|148831148|gb|EDL49582.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
          Length = 352

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + ++   E   L TK  ++    +  +   LE  + 
Sbjct: 178 MKGMGQIVSWSIRDESLHCEGIIRMFHEFVRERDCL-TKAVKEDIIDICQKTVRLEDNFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     ++Y+++IA+ R  Q+ L+P++   ++P PW++ +I+  +  NF
Sbjct: 237 DLAFEMGPVSGMTPKDIKKYIRYIADWRLGQLNLDPIYMVDDHPLPWLAPLINGVEHANF 296

Query: 120 FETRVTEYQQGAG 132
           FE R TEY +GA 
Sbjct: 297 FEQRATEYSKGAT 309


>gi|326386063|ref|ZP_08207687.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209288|gb|EGD60081.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 351

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDE+LH      +      E     TK  ++       +   LE A+ 
Sbjct: 178 MKGMGQIVSWSVRDETLHCEGITRLFQAFVQER-DCMTKAVREDIIDCCQKTVRLEDAFI 236

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                +G   G++A   ++Y+++IA+ R  Q+G +P++   E+P PW++ +++  +  NF
Sbjct: 237 DLAFEQGPVPGMSAKEIKRYIRYIADWRLGQLGFQPIYMIEEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGAG 132
           FETR TEY + A 
Sbjct: 297 FETRATEYSKAAT 309


>gi|160915703|ref|ZP_02077911.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
 gi|158432179|gb|EDP10468.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
          Length = 353

 Score =  149 bits (378), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 4/140 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  ++ +YI RDE+ HL     ++ ++K E P L+T E  +  + ML      E+ +A
Sbjct: 213 MPGSVQEIRYINRDENTHLWLFRSILLELKKEEPQLFTPEHIEIYKGMLKHGVEEEVKWA 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP--FPWMSEVIDLK-KE 116
              + +   GL       Y+ ++ N R + +G   L+  Y + P    W+S   +    +
Sbjct: 273 EYVLGERMEGLTMEMVADYIHYLGNLRSNALGFGSLYDGYEKEPASMEWVSMYSNANIIK 332

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FFE + T Y + + L  D
Sbjct: 333 TDFFEAKSTAYAKSSALVDD 352


>gi|329888543|ref|ZP_08267141.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328847099|gb|EGF96661.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 348

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E     TK               +E  + 
Sbjct: 190 MKGMGQIVSWSVRDESLHCEGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVIEMEDKFI 248

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+     + Y++FIA+ R  Q+ L  ++  TENP PW+  ++   +  NF
Sbjct: 249 DLAFEMGPVNGMTPDDIKAYIRFIADWRLRQLHLPEVYGVTENPLPWLQALLSGVEHANF 308

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 309 FEARATEYSKAAT 321


>gi|281204152|gb|EFA78348.1| ribonucleotide reductase-related protein [Polysphondylium pallidum
           PN500]
          Length = 323

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE LH  F   + +++         K   +   +++ +A   E  + 
Sbjct: 187 MSGLCSSNEFISRDEGLHCQFACLLYSKL-------VNKLDAKTIESIIRDAVDCEKEFI 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            +++P   +G+N     +Y++F+A+     +G + ++  T NPF WM E+I +    NFF
Sbjct: 240 TQSLPVDLIGMNNRLMSEYIEFVADHLIVALGYKKIYN-TANPFDWM-ELISIDTRTNFF 297

Query: 121 ETRVTEYQQGAG 132
           E R T Y     
Sbjct: 298 EHRNTSYTIPGV 309


>gi|310831442|ref|YP_003970085.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
 gi|309386626|gb|ADO67486.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
          Length = 326

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE +H ++ I + + ++        K  Q+K + M  +A   E  + 
Sbjct: 189 MPGLISSNELIARDEGMHCDYSIMLYHMLQ-------NKLSQEKIQQMFKDAVETERIFI 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+NA   EQY++F+A++   ++G   +FK  +NPF WM E I ++ + NFF
Sbjct: 242 CESLPCSLLGMNADLMEQYIKFVADQLIIKLGYNKIFK-VDNPFTWM-EAISIEGKTNFF 299

Query: 121 ETRVTEYQQG 130
           E R T+YQ+ 
Sbjct: 300 EHRPTQYQRA 309


>gi|311898297|dbj|BAJ30705.1| putative ribonucleoside-diphosphate reductase subunit beta
           [Kitasatospora setae KM-6054]
          Length = 339

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 80/136 (58%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H++F   V++ ++ E P L+  +  ++   ML EA   E+ +A +
Sbjct: 203 GLATGTNWVFRDESMHMDFAFSVVDTVREEEPDLFDDKMARQVTEMLEEAVEAELQFARD 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  +Y+Q +A++R  ++GL P+   + NPF +M E+ ++++  NFFE 
Sbjct: 263 LCGEGLPGMNTESMREYLQAVADQRLARLGL-PIRYGSTNPFGFM-ELQNVQELTNFFER 320

Query: 123 RVTEYQQG--AGLKWD 136
           RV+ YQ      + +D
Sbjct: 321 RVSAYQIAVEGSVSFD 336


>gi|118443949|ref|YP_878438.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
 gi|118134405|gb|ABK61449.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
          Length = 342

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K ENP ++T+   ++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEITHLILFQNIIKELKNENPDIFTESIMEEFRMMMKMGVEHEIKWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKN 118
                   +G+N    E+Y+++++N R + IGLE L+ + TE+P  W+     L   + +
Sbjct: 262 QYVTNNEILGINDNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|271967540|ref|YP_003341736.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
 gi|270510715|gb|ACZ88993.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
          Length = 331

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F   V++ ++ E P L+  +   +   M+ EA   E+A+A +
Sbjct: 195 GLATGTNWVFRDESMHMEFAFSVVDTVRAEEPDLFDDKLGAQVTQMIEEAVEAELAFAAD 254

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N     QY++++A++R  ++     +  T NPF +M E+ D+++  NFFE 
Sbjct: 255 LCGDGMSGMNVEQMRQYLEYVADQRLVRLRFPVRY-GTANPFAFM-ELQDVQELANFFER 312

Query: 123 RVTEYQQG--AGLKWD 136
           RV+ YQ      + +D
Sbjct: 313 RVSAYQVAVEGNVSFD 328


>gi|332185556|ref|ZP_08387304.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
 gi|332014534|gb|EGI56591.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
          Length = 351

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   L TK  +            LE  + 
Sbjct: 178 MKGMGQIVTWSVRDESLHCEGIIQLFHAFTKERQCL-TKAVKDDIADQCQTTVRLEDNFI 236

Query: 61  HETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G V G+ A   ++Y+++IA+ R  Q+GL+P++   E+P PW++ +++  +  NF
Sbjct: 237 DLAFEMGPVNGMTAKDIKKYIRYIADWRLGQLGLKPIYMIDEHPLPWLTPLLNGVEHANF 296

Query: 120 FETRVTEYQQGAG 132
           FETR TEY + A 
Sbjct: 297 FETRATEYSKAAT 309


>gi|16124515|ref|NP_419079.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus CB15]
 gi|221233200|ref|YP_002515636.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus NA1000]
 gi|13421393|gb|AAK22247.1| ribonucleoside-diphosphate reductase, beta subunit [Caulobacter
           crescentus CB15]
 gi|220962372|gb|ACL93728.1| ribonucleoside-diphosphate reductase beta chain [Caulobacter
           crescentus NA1000]
          Length = 347

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH +  I + +    E     TK               +E  + 
Sbjct: 187 MKGMGQIVSWSIRDESLHCDGIIKLYHAFNKETG-AVTKAVADDIVDCCKTVVGMEDNFI 245

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+     + Y++F+A+ R  Q+ L  ++   ENP PW+  ++   +  NF
Sbjct: 246 DLAFEAGDIQGMTPDDIKAYIRFVADWRLRQLHLPEVYGVKENPLPWLQSLLSGVEHANF 305

Query: 120 FETRVTEYQQGAG 132
           FE R TEY + A 
Sbjct: 306 FEARATEYSKAAT 318


>gi|329847182|ref|ZP_08262210.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
           biprosthecum C19]
 gi|328842245|gb|EGF91814.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
           biprosthecum C19]
          Length = 352

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 3/134 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + +    E   L TK  Q            +E  + 
Sbjct: 189 MKGMGQIVSWSVRDESLHCEGIIKLYHAFAKETKAL-TKSVQDDIIDCCKTVVTMEDKFI 247

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN 118
                 G   G+     + Y+++IA+ R  Q+ L  ++    ENP PW+  ++   +  N
Sbjct: 248 DLAFEMGPVQGMTPDDIKAYIRYIADWRLRQLNLPEVYGGVKENPLPWLQVLLSGVEHAN 307

Query: 119 FFETRVTEYQQGAG 132
           FFE R TEY + A 
Sbjct: 308 FFEARATEYSKAAT 321


>gi|310823070|ref|YP_003955428.1| ribonucleoside-diphosphate reductase subunit beta [Stigmatella
           aurantiaca DW4/3-1]
 gi|309396142|gb|ADO73601.1| Ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 336

 Score =  148 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 2/131 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F  + I   + E P L+    Q     M+ EA   E  +A +
Sbjct: 196 GLAAGTNWVFRDESTHMAFAFEAIRVARQEEPDLFDARMQADVVAMMREAVECETLFAQD 255

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL+     QY++++A++R   +GL P+F+  +N  P+M  + D+++  NFFE 
Sbjct: 256 LLSGGVAGLSVQEMRQYLEYVADQRLTMLGLAPVFR-VKNSLPFMD-LQDVQELTNFFER 313

Query: 123 RVTEYQQGAGL 133
           RV+ YQ   G+
Sbjct: 314 RVSAYQVAVGV 324


>gi|289548460|ref|YP_003473448.1| ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
 gi|289182077|gb|ADC89321.1| Ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
          Length = 342

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+   +Q +YI RDE  H++   ++I  +K ENP L+T E ++  +     A   EI + 
Sbjct: 206 MLSTVQQIKYINRDELTHVSLFRNIILTLKKENPELFTPEMEKWVKEFFRYAASEEIKWG 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK-EKN 118
                   +G+N    ++Y++++AN R  QIG EP+F   TENP  W+     +   + +
Sbjct: 266 QYVTRNQILGINDQLIDRYIKYLANLRLTQIGYEPVFPDVTENPMKWIDTFRTINDTKTD 325

Query: 119 FFETRVTEYQQGAGLKW 135
           FF+ +   Y + + LKW
Sbjct: 326 FFQAKPQTYAKRSELKW 342


>gi|145596896|ref|YP_001161193.1| ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
 gi|145306233|gb|ABP56815.1| Ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
          Length = 350

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 44/136 (32%), Positives = 83/136 (61%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  DV++ ++ E P L+  + +++ + M+ EA   E+ +A +
Sbjct: 214 GLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDADLERQVKEMVAEAVDCEVQFAED 273

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + +G  GL+     +Y+Q +A+RR   +G+ P++  + NPF +M E+ D+++  NFFE 
Sbjct: 274 LLEQGVSGLSLADMREYLQHVADRRLVTLGIAPMY-GSANPFAFM-ELQDVQELSNFFER 331

Query: 123 RVTEYQQG--AGLKWD 136
           RV+ YQ G    + +D
Sbjct: 332 RVSAYQMGVSGSVTFD 347


>gi|187778605|ref|ZP_02995078.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
 gi|187772230|gb|EDU36032.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
          Length = 342

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 76/138 (55%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K ENP+++T+E +++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEVTHLVLFQNIIKELKSENPNIFTEELEEEFREMMRMGVEHEIKWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
                   +GLN    ++Y+++++N R   IGL+PL+ +  ++P  W+     L   + +
Sbjct: 262 QYVTNNEILGLNDELIDKYIKYLSNLRLTAIGLKPLYPEINKHPMEWIDSFSKLNSTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAVFDFD 339


>gi|108763495|ref|YP_633213.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
           xanthus DK 1622]
 gi|108467375|gb|ABF92560.1| ribonucleoside-diphosphate reductase, beta subunit [Myxococcus
           xanthus DK 1622]
          Length = 349

 Score =  147 bits (373), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 2/131 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F  + I   + E P L+  + ++    ML EA   E  +A +
Sbjct: 209 GLAAGTNWVFRDESAHMAFAFESIQVARKEEPDLFDAQMERDVVAMLREAVECETQFAQD 268

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G +GL+      Y++++A++R   +G+ P+F  T+NP  +M  + D+++  NFFE 
Sbjct: 269 LLSGGVMGLSVQDMRGYLEYVADQRLQMLGMTPVF-GTKNPLHFMD-LQDVQELTNFFER 326

Query: 123 RVTEYQQGAGL 133
           RV+ YQ   G+
Sbjct: 327 RVSSYQVAVGV 337


>gi|311743885|ref|ZP_07717691.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
 gi|311313015|gb|EFQ82926.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
          Length = 357

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 1/130 (0%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
                +I+RDESLHL FGI++I  +  ENP + T EF  + + M+ +A  +E AY  + +
Sbjct: 229 GSLIDWIVRDESLHLKFGINLILTVLEENPEVATAEFAAEIQQMVLDAVEMEEAYNRDLL 288

Query: 65  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 124
           P G +GLNA    QY++++A+RR  ++G  P +  T NP  WM+   D  +  NFFE   
Sbjct: 289 PGGILGLNADYINQYVRYLADRRLEELGFGPHYGAT-NPAKWMATANDTLQLVNFFEATN 347

Query: 125 TEYQQGAGLK 134
           T Y+  A L 
Sbjct: 348 TSYEVNAKLT 357


>gi|38683666|gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a]
          Length = 342

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 9/132 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+      I RDE LH    + + N +K   P             +  +A  LE  +  E
Sbjct: 207 GLCFANSLIARDEGLHAEGSVMIYNHLKHRLP-------VAVVHDIFTDAVALEKEFIRE 259

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           ++P   +G+NA +   Y++++++    ++G   LF  T+NPF WM+ +I ++ + NFFE 
Sbjct: 260 SLPVSLIGINADTMSSYIEYVSDFWIQRLGYPKLF-GTKNPFEWMT-MIGMEGKSNFFEG 317

Query: 123 RVTEYQQGAGLK 134
           RV EY +   + 
Sbjct: 318 RVAEYAKAGSMT 329


>gi|222824493|ref|YP_002576067.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
 gi|222539714|gb|ACM64815.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
          Length = 340

 Score =  147 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 3/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+      K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERADLFNDTNVSKIYDMFKKAGELEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   I L+ ++   ++P  W+ +      +K NF
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLIAINLDKIYN-VKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE++VT Y +G+ L +D
Sbjct: 323 FESKVTNYSKGS-LSFD 338


>gi|168186576|ref|ZP_02621211.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
 gi|169295422|gb|EDS77555.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
          Length = 342

 Score =  147 bits (372), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   +  ++YI RDE  HL    ++I ++K EN  ++T+   ++ R M+      EI + 
Sbjct: 202 MTATSTIFKYINRDEITHLILFQNIIKELKNENLDIFTESIIEEFRMMMKTGVEHEIKWG 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKN 118
                   +G+N    E+Y+++++N R + IGLE L+ + TE+P  W+     L   + +
Sbjct: 262 QYVTNNEILGINNNLIEKYIKYLSNLRLNAIGLEVLYPEITEHPMEWIENFSKLNNTKTD 321

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE +VT Y + A   +D
Sbjct: 322 FFEAKVTNYTKAAAFDFD 339


>gi|322510501|gb|ADX05815.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 1]
          Length = 324

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 40/128 (31%), Positives = 76/128 (59%), Gaps = 9/128 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE+LH  F + + ++++ +      +E  +       EA ++E  + 
Sbjct: 189 MPGLTFSNELISRDEALHTEFAVHLFHKLEKKINKKKIREIIE-------EAVVIEKEFI 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N+    QY++++A+R   Q+G E +++ T NPF +M E+I L+++ NFF
Sbjct: 242 VESLPCRLIGMNSDLMTQYIEYVADRLMIQLGCEEIYR-TNNPFDFM-ELISLEQKTNFF 299

Query: 121 ETRVTEYQ 128
           E+RV+EY 
Sbjct: 300 ESRVSEYS 307


>gi|291239432|ref|XP_002739627.1| PREDICTED: hCG23833-like [Saccoglossus kowalevskii]
          Length = 309

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 9/127 (7%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+ +  ++I RDE LH  F   +  +IK   P         K R ++ E   +E  +   
Sbjct: 180 GLTQANEFISRDEGLHCTFACTMYGKIKPRLPD-------TKVRKIVLEGCEVEKLFVKH 232

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            + K  +G+N+   E Y+ F+ +     +G E  F    NPFP+M   I ++ + NFFE 
Sbjct: 233 ALRKPLLGMNSHLMETYVNFVTDNLLTDLGYEKEF-GVNNPFPFMD-NISMQGKTNFFER 290

Query: 123 RVTEYQQ 129
           RVTEY +
Sbjct: 291 RVTEYTR 297


>gi|56555145|gb|AAV98100.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 328

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 8/123 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    ++I RDE LH +F   ++ +  ++ P       +++   ++ EA  +E  + 
Sbjct: 214 LPGLTSSNEFISRDEGLHRDFACMLLKKGFVDTP------SRERILEIVTEAVRIEQEFL 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             ++P   VG+N     QY++F+A++   ++GLE  +  T NPFP+M   I L+ + NFF
Sbjct: 268 TVSLPVKLVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVT-NPFPFMD-NISLENKTNFF 325

Query: 121 ETR 123
           E R
Sbjct: 326 EKR 328


>gi|488081|gb|AAA56996.1| ribonucleoside-diphosphate reductase small subunit [Drosophila
           melanogaster]
          Length = 214

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 61/116 (52%), Gaps = 9/116 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F + +         HL  +  +++   ++ +A  +E  + 
Sbjct: 108 MPGLTFSNELISRDEGLHCDFAVLMFQ-------HLVQRPKRERIIEIIRDAVAIEQEFL 160

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 116
            + +P   +G+N     QY++F+A+R   ++G+  ++  T+NPF +M E+I L  +
Sbjct: 161 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYN-TKNPFNFM-EMISLDGK 214


>gi|304321610|ref|YP_003855253.1| ribonucleoside-diphosphate reductase subunit beta [Parvularcula
           bermudensis HTCC2503]
 gi|303300512|gb|ADM10111.1| ribonucleoside-diphosphate reductase, beta subunit [Parvularcula
           bermudensis HTCC2503]
          Length = 340

 Score =  146 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    + + ++   E   L T                LE  + 
Sbjct: 186 MKGMGQIVTWSIRDESLHCEGMVRLFHEFARETGAL-TPAVADDIVDCCKTVVDLEDKFI 244

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+     + Y++ IA+ R  Q+GL P+F    +P PW+ E+++  +  NF
Sbjct: 245 ELAFEAGEVEGMTPDDIKAYIRHIADWRLSQLGLPPVFAADNHPLPWLREILNGVEHANF 304

Query: 120 FETRVTEYQQGAG 132
           FE R TEY +GA 
Sbjct: 305 FEARATEYSKGAT 317


>gi|253582918|ref|ZP_04860136.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
 gi|251835124|gb|EES63667.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
          Length = 348

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  + I RDE  H+     ++ +I+ ENP  +  E   +   M  +A   EI + 
Sbjct: 208 MMGTSDIIRLINRDELSHVVIFQHLLKEIRNENPDFFNDE---EIYDMFRKAVEQEINWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK---- 115
           +  +    +G+   + EQY +++AN R   IGL+P++    +NP+  +++  D +     
Sbjct: 265 NHIIGNQILGITEETTEQYTKWLANERLRSIGLKPIYDGFNKNPYKHLTKFADTEGEGNV 324

Query: 116 EKNFFETRVTEYQQGAGLK-WD 136
           + NFFE  VT Y   + +  WD
Sbjct: 325 KANFFEGTVTSYNMSSSIDGWD 346


>gi|83859670|ref|ZP_00953190.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
 gi|83852029|gb|EAP89883.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
          Length = 348

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    + + +    E   L TK  +            LE  + 
Sbjct: 186 MKGMGQIVSWSVRDESLHCEGMMKLFHTFAEETGAL-TKGVKDDIADCCKTVVSLEDKFI 244

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   G+     + Y+++IA+ R  Q+ L  ++   E+P PW++E+++  +  NF
Sbjct: 245 ELAFEAGEVEGMTPEDIKNYIRYIADWRMKQLKLPTIYGVEEHPIPWLTEILNGVEHANF 304

Query: 120 FETRVTEYQQGAG 132
           FE R TEY +GA 
Sbjct: 305 FEARATEYSKGAT 317


>gi|317122809|ref|YP_004102812.1| ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
 gi|315592789|gb|ADU52085.1| Ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
          Length = 336

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 1/131 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+A    ++++DESLHL+FGI +I  +  E+P L T EF ++ + ++  A  LE  Y 
Sbjct: 203 LKGLATLVDWVLKDESLHLSFGIHLITTLLEEHPELMTPEFAREVKGLILRAVELERDYN 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P+  +G++A     Y++++ +RR  ++GL P F  T NP  WM+  +D+ +  NFF
Sbjct: 263 RALLPRPILGVSADYLNAYIEYVTDRRLDELGLGPHF-GTPNPAQWMATEVDVPEIVNFF 321

Query: 121 ETRVTEYQQGA 131
           E R   Y+  A
Sbjct: 322 EARNIHYEVAA 332


>gi|126664354|ref|ZP_01735338.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
 gi|126630680|gb|EBA01294.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
          Length = 352

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 3/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  EQ+QYI+RDE++H +FG+ V+NQI  E    +     +  R M  E+   E  YA
Sbjct: 221 MRGTGEQFQYILRDEAMHFSFGLKVVNQILEEENISFDP---KAVRDMWDESEAAESDYA 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           +  +    +G +A    +  +F+ANRR   + L   F   +N  PW+ E   ++KEKNFF
Sbjct: 278 NYILRDPILGYSAEYHIEQFRFVANRRARTVNLPEPFPGAKNVSPWLEEQATMRKEKNFF 337

Query: 121 ETRVTEYQQGAGLKW 135
           ETRV EYQ GA L+W
Sbjct: 338 ETRVIEYQTGAQLEW 352


>gi|197322443|ref|YP_002154716.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
 gi|197130510|gb|ACH46846.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
          Length = 342

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 9/132 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+      I RDE LH    + + N +K   P             +  +AT +E  +  E
Sbjct: 207 GLCFANSLIARDEGLHAEGSVMIYNHLKHRLP-------VAVVHDIFGQATTIEKEFIRE 259

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +G+NA +   Y+++I++    ++G   LF  ++NPF WM+ +I ++ + NFFE 
Sbjct: 260 ALPVSLIGINAGTMSTYIEYISDFWLEKLGYPKLFN-SKNPFEWMT-MIGMEGKSNFFEG 317

Query: 123 RVTEYQQGAGLK 134
           RV EY +   + 
Sbjct: 318 RVAEYSKAGSMT 329


>gi|11544904|emb|CAC17630.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces jumonjinensis]
          Length = 322

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 40/121 (33%), Positives = 72/121 (59%), Gaps = 2/121 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    QQ+   ML EA   E+ +  +
Sbjct: 203 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLQEAVEAELQFGSD 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
               G  G+N  S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 263 LCGDGLPGMNTESMREYLQCVADQRLTRLGFAPVY-GSENPFSFM-ELQGVQELTNFFER 320

Query: 123 R 123
           R
Sbjct: 321 R 321


>gi|238023979|ref|YP_002908211.1| Ribonucleotide reductase subunit beta [Burkholderia glumae BGR1]
 gi|237878644|gb|ACR30976.1| Ribonucleotide reductase, beta subunit [Burkholderia glumae BGR1]
          Length = 337

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/135 (42%), Positives = 74/135 (54%), Gaps = 3/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   A+Q+QYIMRDE LH  FGI VI Q+  E  HL         + +  EA   E AYA
Sbjct: 205 MKATAQQFQYIMRDEVLHCGFGIRVIRQLLEEE-HLRLDPH--AVQQIWEEAEAAERAYA 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +    +G +A    +  +FIANRR  Q+ +   F    N  PW+ E  +L+KEKNFF
Sbjct: 262 QYILRDPILGYSAELHCEQFRFIANRRATQLSMPAPFPGATNALPWLDEQANLRKEKNFF 321

Query: 121 ETRVTEYQQGAGLKW 135
           ETRVT+YQ G  L W
Sbjct: 322 ETRVTDYQSGGALDW 336


>gi|256825983|ref|YP_003149943.1| ribonucleotide reductase subunit beta [Kytococcus sedentarius DSM
           20547]
 gi|256689376|gb|ACV07178.1| ribonucleotide reductase, beta subunit [Kytococcus sedentarius DSM
           20547]
          Length = 365

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/136 (33%), Positives = 77/136 (56%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F  +V+  ++ E P L+  E   + R ML EA   E  +A +
Sbjct: 229 GLASGTNWVFRDESMHMAFAFEVVETVRSEEPDLFDAEMAGQVRQMLMEAVDAEAQFAED 288

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL+      Y++ +A+RR  Q+G+  ++  T+NP  +M E+ D+++  NFFE 
Sbjct: 289 LLGMGVAGLSVADMRAYLENVADRRAVQLGMPEIY-GTKNPLAFM-ELQDVQELSNFFER 346

Query: 123 RVTEYQQG--AGLKWD 136
           RV+ YQ G    + +D
Sbjct: 347 RVSAYQVGVEGSVSFD 362


>gi|237749822|ref|ZP_04580302.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
 gi|229374572|gb|EEO24963.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
          Length = 351

 Score =  145 bits (368), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 2/131 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   AE  ++I RDE  HL     +I   + E P L+T+  Q +   M  +A  LE ++ 
Sbjct: 214 MQNSAEMIRFIQRDEITHLTIFQQMIISTRKERPDLFTQALQDEVMEMFRQAVDLESSWG 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNF 119
                   +GL A    QY++++A++R   +    L+  T+NP  W+ E ++   +  NF
Sbjct: 274 EYITQGQILGLTAKIIRQYIEYLADKRLKAVDYPILYN-TQNPIQWVDEQVNFNNQRTNF 332

Query: 120 FETRVTEYQQG 130
           FE +V  Y +G
Sbjct: 333 FEAKVRNYTRG 343


>gi|153875510|ref|ZP_02003277.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
 gi|152068026|gb|EDN66723.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
          Length = 374

 Score =  145 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/134 (46%), Positives = 86/134 (64%), Gaps = 2/134 (1%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+QY YI RDE+LH + G+ +I QI  EN  LW    Q++SR ++ EA  LE  YAH +
Sbjct: 242 TAQQYSYIWRDENLHSSNGLWLIKQIIQENHELWDSTMQERSRAIVSEAVKLETDYAHAS 301

Query: 64  MPK-GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
           MP+ G VGL   +  ++  F+A+  C  +G++PLF+  E+P PW+SE  +L  E NFFE 
Sbjct: 302 MPEGGIVGLPVKTYIKFSHFVADNICKNLGIKPLFRVREHPMPWISEY-ELNHEVNFFEG 360

Query: 123 RVTEYQQGAGLKWD 136
           RV EYQ G+ L WD
Sbjct: 361 RVREYQTGSQLTWD 374


>gi|257458932|ref|ZP_05624052.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
 gi|257443636|gb|EEV18759.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
          Length = 340

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 3/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E   L+ K    K   M   A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERADLFNKRNVDKIYEMFETAGNLEIDWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NF 119
                   +G      E+Y+ ++ ++R   IGLE  +   ++P  W+ +      +K NF
Sbjct: 264 KYITDNQIMGFTDDIIEEYIHYLVDQRLLAIGLEKRYD-AKHPIKWVDDFSKFNDQKSNF 322

Query: 120 FETRVTEYQQGAGLKWD 136
           FE++VT Y +G+ L +D
Sbjct: 323 FESKVTNYSKGS-LSFD 338


>gi|319942042|ref|ZP_08016361.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
 gi|319804426|gb|EFW01304.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
          Length = 344

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 2/132 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + + DE+LH      +  +   ENP LWT E + K   +      LE  + 
Sbjct: 200 MKGMGQIIAWSIADETLHTESMTKIFREYITENPELWTDELKAKIYGIAEVMVDLEDKFI 259

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                   +  L       Y+++IA+RR   +GL+ +FK T NP PW+  ++      NF
Sbjct: 260 DLAFGVSEMKRLTREDVRSYIRYIADRRLMGLGLKGIFKSTTNPLPWVDAML-GVTHTNF 318

Query: 120 FETRVTEYQQGA 131
           FE RV +Y +GA
Sbjct: 319 FENRVVDYAKGA 330


>gi|167948644|ref|ZP_02535718.1| Ribonucleotide reductase, beta subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 124

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/127 (42%), Positives = 66/127 (51%), Gaps = 3/127 (2%)

Query: 10  YIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 69
           YIMRDE LH +FGI V  QI +E          Q  R M  E    E AYA   +    +
Sbjct: 1   YIMRDEVLHASFGIRVAKQIMLEENIAPDP---QAIREMWDECEAAEDAYAGYILRDPIL 57

Query: 70  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           G +        +++ANRR  QIGL   +   E   PW+ E  +L+KEKNFFET VTEYQ 
Sbjct: 58  GYSKDDHMGQFRYVANRRARQIGLSEPYPGAEATLPWLDEQANLRKEKNFFETTVTEYQT 117

Query: 130 GAGLKWD 136
           G  L WD
Sbjct: 118 GGALNWD 124


>gi|317062933|ref|ZP_07927418.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688609|gb|EFS25444.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
          Length = 353

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  + I RDE  H+     ++ +I+ ENP  +  E   +  +M  +A   EI + 
Sbjct: 213 MMGTSDVIRLINRDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWT 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK---- 115
           +  +    +G+   + EQY +++AN R   IGL+P+++   +NP+  +++  D +     
Sbjct: 270 NHIIGNQILGITEETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNV 329

Query: 116 EKNFFETRVTEYQQGAGLK-WD 136
           + NFFE  VT Y   + +  WD
Sbjct: 330 KANFFEGTVTSYNMSSSIDGWD 351


>gi|42523460|ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
 gi|39575666|emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
          Length = 336

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/136 (32%), Positives = 79/136 (58%), Gaps = 4/136 (2%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES+H+ F I+V+   + E P L+ ++ +     ML +A   E+ +AH+
Sbjct: 200 GLASGTNWVFRDESMHMAFAIEVVKTARKEEPELFNQQMEDMVVQMLEDAIECEMEFAHD 259

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL+A    QY+++ A++R   + + P +   +NPF +M E+ D+++  NFFE 
Sbjct: 260 VLNLGVAGLSAKDMRQYLEYCADQRLESLNIAPRYN-VKNPFIFM-ELQDMQELANFFER 317

Query: 123 RVTEYQQG--AGLKWD 136
           RV+ YQ G    + +D
Sbjct: 318 RVSAYQTGVSGAVAFD 333


>gi|163781846|ref|ZP_02176846.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883066|gb|EDP76570.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
          Length = 350

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 2/137 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    +Q +YI RDE  H+    ++I  ++ E P L++ E ++        A   EI + 
Sbjct: 214 MTNTVQQIKYINRDELTHVTLFRNMILNLQKEQPELFSPEIKKWIAEYFRYAIDQEIKWG 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKN 118
                   +G+N    ++Y++++ N R  QIGLEPL+ + TENP  W+ +   +   + +
Sbjct: 274 QYVTQDQILGINNQLIDRYIKYLGNLRITQIGLEPLYPEITENPMKWIDDFRKINNTKTD 333

Query: 119 FFETRVTEYQQGAGLKW 135
           FF+ +   Y +   LKW
Sbjct: 334 FFQRKPQTYAKANELKW 350


>gi|257468678|ref|ZP_05632772.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           ulcerans ATCC 49185]
          Length = 348

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  + I RDE  H+     ++ +I+ ENP  +  E   +  +M  +A   EI + 
Sbjct: 208 MMGTSDVIRLINRDELSHVVIFQHLLKEIRNENPDFFNDE---EIYSMFRKAVEQEINWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK---- 115
           +  +    +G+   + EQY +++AN R   IGL+P+++   +NP+  +++  D +     
Sbjct: 265 NHIIGNQILGITEETTEQYTKWLANERLRSIGLKPIYEGFNKNPYKHLTKFADTEGEGNV 324

Query: 116 EKNFFETRVTEYQQGAGLK-WD 136
           + NFFE  VT Y   + +  WD
Sbjct: 325 KANFFEGTVTSYNMSSSIDGWD 346


>gi|224372455|ref|YP_002606827.1| ribonucleotide-diphosphate reductase subunit beta [Nautilia
           profundicola AmH]
 gi|223589410|gb|ACM93146.1| ribonucleoside-diphosphate reductase, beta subunit [Nautilia
           profundicola AmH]
          Length = 346

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 3/134 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  H     ++  +IK E P L+T E  +  + ML+ A  LE  + 
Sbjct: 207 MLGSAQMIRFIQRDEVTHTLLFANIFKEIKKEFPDLFTPEVIKNIKDMLYAAYELERDWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLKK-EK 117
                   +G++    +++ Q++AN+R   +GL+ LF     +NP  W        + + 
Sbjct: 267 WYITNDEILGMSKELIDRFTQYLANKRAQAMGLDLLFPEVGLKNPISWFDGFSSFNEQKT 326

Query: 118 NFFETRVTEYQQGA 131
           NFFE  V  Y +G+
Sbjct: 327 NFFEGNVVNYSKGS 340


>gi|313903043|ref|ZP_07836438.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
 gi|313466767|gb|EFR62286.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
          Length = 336

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 44/131 (33%), Positives = 76/131 (58%), Gaps = 1/131 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+A    ++++DESLHL+FGI +I  +  E+P L T  F ++ + ++  A  LE  Y 
Sbjct: 203 LKGLATLVDWVLKDESLHLSFGIHLITALLEEHPELMTPAFAREVKGLILRAVELERDYN 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P+  +G++A     Y++++ +RR  ++GL P F  T NP  WM+  +D+ +  NFF
Sbjct: 263 RALLPRPILGVSADYLNAYVEYVTDRRLDELGLGPHF-GTPNPAKWMATEVDVPEIVNFF 321

Query: 121 ETRVTEYQQGA 131
           E R   Y+  A
Sbjct: 322 EARNIHYEVAA 332


>gi|11544907|emb|CAC17632.1| class I ribonucleotide-diphosphate reductase small chain
           [Streptomyces microflavus]
          Length = 321

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 73/121 (60%), Gaps = 2/121 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDE++H+NF  +V++ ++ E P L+    Q++   ML EA   E+ +  +
Sbjct: 202 GLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQEQVTAMLKEAVEAELQFGRD 261

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
              +G  G+N  S  +Y+Q +A++R  ++G  P++  +ENPF +M E+  +++  NFFE 
Sbjct: 262 LCGEGLPGMNTESMREYLQCVADQRLTRLGFAPVY-GSENPFAFM-ELQGVQELTNFFER 319

Query: 123 R 123
           R
Sbjct: 320 R 320


>gi|149194868|ref|ZP_01871962.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
 gi|149135027|gb|EDM23509.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
          Length = 346

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 3/134 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  H     ++  +IK E P L+T E  +  + ML+ A  LE  + 
Sbjct: 207 MLGSAQMIRFIQRDEVTHTLLFANIFKEIKKEFPDLFTPEVIRNIKDMLYAAYELERDWG 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLKK-EK 117
                   +GL+    +++ +++AN+R H +GLE LF     +NP  W        + + 
Sbjct: 267 FYITNDEILGLSKELIDRFTKYLANKRAHAMGLELLFPEIGLKNPISWFDSFSSFNEQKT 326

Query: 118 NFFETRVTEYQQGA 131
           NFFE  V  Y +G+
Sbjct: 327 NFFEGNVVNYSKGS 340


>gi|167461830|ref|ZP_02326919.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
 gi|322383591|ref|ZP_08057349.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321152059|gb|EFX44995.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 343

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 4/134 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++   YI RDE+ H  F  +V   +  + P L T E  Q     + +A  LE  +A
Sbjct: 203 MLGTSQMISYIQRDEAQHAYFFGEVFKLLLTDFPELNTSERIQYVYDTIDQAVKLEEKWA 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID---LKKEK 117
           H  +     G++     +Y++FIAN+R   +GL+P ++  +N  PW+    D    + + 
Sbjct: 263 HYVL-NQIDGIDLDDFSRYIRFIANKRLKTMGLQPAYEGVDNCMPWIRPFSDEALNQTKT 321

Query: 118 NFFETRVTEYQQGA 131
           +FFE +   Y + +
Sbjct: 322 DFFEAKSRTYAKVS 335


>gi|149916691|ref|ZP_01905193.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
 gi|149822408|gb|EDM81797.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
          Length = 356

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 2/134 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F   VI+ ++ + P L+  E +     M+ EA   E+A+A +
Sbjct: 220 GLAAGTNWVFRDESAHMAFAFSVIDVVRDQEPELFDAELEAAVVEMIEEAVACEVAFAED 279

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL       Y+++ A++R  ++G+   +  + NP  +M E+ D+ +  NFFE 
Sbjct: 280 LLGLGVAGLTVADLRAYLEYCADQRLQRLGMATRY-GSTNPLSFM-ELQDIPELANFFER 337

Query: 123 RVTEYQQGAGLKWD 136
           RV+ YQ G     D
Sbjct: 338 RVSAYQHGVSGTID 351


>gi|162452149|ref|YP_001614516.1| ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
 gi|161162731|emb|CAN94036.1| Ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
          Length = 339

 Score =  143 bits (361), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 2/130 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H+ F  +V++  + E P L+     +    M+ EA   E  +A +
Sbjct: 203 GLAAGTSWVFRDESAHMRFAFEVVSTARREEPELFDAGLARSILDMMDEAIACEARFAED 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  G++A    +Y++F A++R   +G+   +   +NPF +M  + D+++  NFFE 
Sbjct: 263 LLGAGVAGMSARDVRRYLEFCADQRLATLGMPKRY-GAKNPFSFMD-LQDVQEVTNFFER 320

Query: 123 RVTEYQQGAG 132
           RV+ YQ G  
Sbjct: 321 RVSAYQVGVS 330


>gi|88856487|ref|ZP_01131145.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
 gi|88814354|gb|EAR24218.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
          Length = 332

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 52/123 (42%), Positives = 79/123 (64%), Gaps = 1/123 (0%)

Query: 10  YIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 69
           +++RDESLHL FGI++I  +  ENP + T+EF  + R M+ +A  +E AY H+ +P G +
Sbjct: 203 WVVRDESLHLKFGINLILTVLEENPEIQTEEFADEIRQMILDAVEMEEAYNHDLLPGGIL 262

Query: 70  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           GLNA    QY++++A+RR  ++G EP +K T NP  WM+   D  +  NFFE+  T Y+ 
Sbjct: 263 GLNANYINQYVKYLADRRLEELGFEPHYKVT-NPAKWMATANDTLELVNFFESTNTSYEA 321

Query: 130 GAG 132
            A 
Sbjct: 322 NAS 324


>gi|190572323|ref|YP_001970168.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
 gi|190010245|emb|CAQ43853.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
          Length = 339

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 2/130 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+A    ++ RDES H+ F  + +  ++ E P L+ +E +Q+   ML EA   E+ +A
Sbjct: 201 LPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDEEMKQQVYDMLAEAIECEVQFA 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +  G  G++     QY+Q  A++   ++G+E  +    NP P+M E+ D+++  NFF
Sbjct: 261 EDVLSGGVAGISTRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFF 318

Query: 121 ETRVTEYQQG 130
           E RV+ YQ G
Sbjct: 319 ERRVSAYQVG 328


>gi|254521240|ref|ZP_05133295.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
 gi|219718831|gb|EED37356.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
          Length = 339

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 2/130 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+A    ++ RDES H+ F  + +  ++ E P L+  E +Q+   ML EA   E+ +A
Sbjct: 201 LPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDDEMKQQVYDMLAEAIECEVQFA 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            + +  G  G++     QY+Q  A++   ++G+E  +    NP P+M E+ D+++  NFF
Sbjct: 261 EDVLSGGVAGISTRDMRQYLQHCADQHFAKLGMEKKYN-VRNPLPFM-ELQDVQELTNFF 318

Query: 121 ETRVTEYQQG 130
           E RV+ YQ G
Sbjct: 319 ERRVSAYQVG 328


>gi|288554979|ref|YP_003426914.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           pseudofirmus OF4]
 gi|288546139|gb|ADC50022.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           pseudofirmus OF4]
          Length = 344

 Score =  141 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE LH+    +V  ++  E+P L  +E +   +  L  A  LE+ + 
Sbjct: 204 MVSTSTMINYINRDEQLHVYLFTNVFKELLEEHPELNNREMESFVKQSLTTAVELELKWY 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLK-KEKN 118
           +  + +   G+ +     Y++FIAN+R  Q+G + +F ++  N F W+    D+   + +
Sbjct: 264 NYIIGEQIEGVTSDEMGSYLKFIANKRAKQLGYDHIFPEHRTNVFKWIKAYEDVNAAKSD 323

Query: 119 FFETRVTEYQQGAG 132
           FFE +  +Y + + 
Sbjct: 324 FFEQKSRQYAKVSS 337


>gi|323487827|ref|ZP_08093085.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
 gi|323398561|gb|EGA91349.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
          Length = 348

 Score =  141 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  +    YI RDE  H  F    I  +  ENP L T E  Q   T + +A  LE  +A
Sbjct: 208 MLKTSTMISYIQRDEMQHAYFIAQFIRIMLTENPELHTDENIQYIYTTIDKAVQLEKEWA 267

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM----SEVIDLKKE 116
              +     GL+     +Y++++AN+R  Q+GL+ L++   NP PW+     ++++   +
Sbjct: 268 QYIL-ADIEGLDLVEFGEYVEYLANKRLRQLGLDNLYEERSNPMPWIQVFGDDMMN-DTK 325

Query: 117 KNFFETRVTEYQQGA 131
            +FFE +   Y + +
Sbjct: 326 SDFFEQKSRTYTKVS 340


>gi|158430770|pdb|2RCC|A Chain A, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430771|pdb|2RCC|B Chain B, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430772|pdb|2RCC|C Chain C, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
          Length = 346

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 2/131 (1%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            +    YI RDE LH+    ++  ++ +E P L T+E +   +T L +A  LE  +    
Sbjct: 209 TSTXINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLXKAADLEKDWFRYI 268

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLK-KEKNFFE 121
           +     G+N    E Y+ FIAN+R  Q+G E  +   + NP  W+    D+   + +FFE
Sbjct: 269 IGDKIPGINPEDXETYISFIANKRAVQLGXEKPYPEIKHNPXKWIRAYEDVNSGKSDFFE 328

Query: 122 TRVTEYQQGAG 132
            +  +Y + + 
Sbjct: 329 QKSRQYAKVSA 339


>gi|253574542|ref|ZP_04851883.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. oral taxon 786 str. D14]
 gi|251846247|gb|EES74254.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. oral taxon 786 str. D14]
          Length = 343

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 5/135 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++   YI RDE+ H  F  +V  Q+ I+ P L TKE    +   +  A  LE  +A
Sbjct: 202 MMGTSQMISYIQRDENQHCYFFAEVFKQLLIDYPELNTKENIDYAYRTIDRAVELETNWA 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID---LKKE 116
           H T+ K   G++      Y+++IAN+R   +GLE  +   + N  PW+    D      +
Sbjct: 262 HYTL-KNVPGIDLNELSDYIKYIANKRLTLMGLEKAYAGVDINCMPWIKPFSDEALNATK 320

Query: 117 KNFFETRVTEYQQGA 131
            +FFE +   Y +  
Sbjct: 321 TDFFEAKSRNYGKVG 335


>gi|323143005|ref|ZP_08077711.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
 gi|322417199|gb|EFY07827.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
          Length = 331

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 3/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + + DE+LH    I +  +   +NP LW  + +    ++  +   LE ++ 
Sbjct: 188 MRGMGQIIAWSINDETLHTESMIKLFREYIEQNPQLWNDDLKSTIYSIAEKMVELEDSFI 247

Query: 61  HETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                      L     ++Y++FIA+RR   +G++ +F   +NP PW+  ++      NF
Sbjct: 248 DLAFGVNQMQKLAKEDVKKYIRFIADRRLSAMGMKAIFNEKKNPLPWVDAML-GVTHTNF 306

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RV +Y +G  L  D
Sbjct: 307 FENRVVDYAKG-ALSGD 322


>gi|320107274|ref|YP_004182864.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
 gi|319925795|gb|ADV82870.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
          Length = 346

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES HL F  +V+  ++ + P LW  E +++   M+ EA   E  +A +
Sbjct: 210 GLASGTNWVFRDESAHLEFAFEVVQVVRAQEPDLWDTELERQVVVMMEEAIDAEAQFAED 269

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  GL+     QY+ ++A+ R  ++G+   F   +NPF +M E+ D+++  NFFE 
Sbjct: 270 LLSGGVAGLSVRDMRQYLGYVADSRLERLGIGAHFN-AKNPFSFM-ELQDVQELTNFFER 327

Query: 123 RVTEYQQG 130
           RV+ YQ  
Sbjct: 328 RVSAYQTA 335


>gi|148273612|ref|YP_001223173.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|170782700|ref|YP_001711034.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|147831542|emb|CAN02508.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|169157270|emb|CAQ02455.1| ribonucleoside-diphosphate reductase beta subunit [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 331

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 1/123 (0%)

Query: 10  YIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFV 69
           +I+RDESLHL FGI++I  +  ENP L T+EF  + + M+ +A  +E  Y  + +P G +
Sbjct: 204 WIVRDESLHLKFGINLILTVLEENPDLQTEEFAAEIKQMILDAVEMEEQYNRDLLPNGIL 263

Query: 70  GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQ 129
           GLNA    QY++++A+RR  ++G E  +K + NP  WM+   D  +  NFFE+  T Y+ 
Sbjct: 264 GLNANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLQLVNFFESTNTSYES 322

Query: 130 GAG 132
            A 
Sbjct: 323 NAS 325


>gi|314918862|gb|EFS82693.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA1]
 gi|314921071|gb|EFS84902.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA3]
          Length = 328

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 1/127 (0%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
                +++RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +
Sbjct: 197 GSLIDWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDML 256

Query: 65  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 124
           P+G +G+NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   
Sbjct: 257 PRGILGMNADYVNDYVKYLADRRLEELGFEPEYRVA-NPAKWMATANDTLQVVNFFEATN 315

Query: 125 TEYQQGA 131
           T Y+  A
Sbjct: 316 TSYEVNA 322


>gi|289425969|ref|ZP_06427716.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|289153512|gb|EFD02226.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|313763766|gb|EFS35130.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA1]
 gi|313802998|gb|EFS44206.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA2]
 gi|313816916|gb|EFS54630.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA1]
 gi|313829718|gb|EFS67432.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA2]
 gi|313839374|gb|EFS77088.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL086PA1]
 gi|314916474|gb|EFS80305.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA4]
 gi|314932316|gb|EFS96147.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL067PA1]
 gi|314956590|gb|EFT00842.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA1]
 gi|314959472|gb|EFT03574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA1]
 gi|314964864|gb|EFT08964.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA1]
 gi|314968630|gb|EFT12728.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA1]
 gi|315079174|gb|EFT51177.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA2]
 gi|315100241|gb|EFT72217.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA2]
 gi|315102565|gb|EFT74541.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA1]
 gi|315109517|gb|EFT81493.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA2]
 gi|327455890|gb|EGF02545.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA3]
 gi|327458042|gb|EGF04697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA2]
 gi|328757204|gb|EGF70820.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA1]
 gi|328757585|gb|EGF71201.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA2]
          Length = 328

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 1/127 (0%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
                +++RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +
Sbjct: 197 GSLIDWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDML 256

Query: 65  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 124
           P+G +G+NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   
Sbjct: 257 PRGILGMNADYVNDYVKYLADRRLEELGFEPEYRVA-NPAKWMATANDTLQVVNFFEATN 315

Query: 125 TEYQQGA 131
           T Y+  A
Sbjct: 316 TSYEVNA 322


>gi|330998673|ref|ZP_08322403.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
 gi|329576534|gb|EGG58042.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
          Length = 327

 Score =  140 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 4/134 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + + DE+LH    I +  +  IENP LWT   +++   +  +   LE A+ 
Sbjct: 180 MKGMGQIIAWSINDETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFI 239

Query: 61  HETMPKGFV---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
                   +    L+    + Y+++I +RR   +G++ +FK   NP PW+  ++      
Sbjct: 240 DLAFGVNDMSKQNLSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSML-GVTHT 298

Query: 118 NFFETRVTEYQQGA 131
           NFFE RV +Y +GA
Sbjct: 299 NFFENRVVDYAKGA 312


>gi|221633388|ref|YP_002522613.1| ribonucleotide-diphosphate reductase subunit beta [Thermomicrobium
           roseum DSM 5159]
 gi|221156578|gb|ACM05705.1| ribonucleoside-diphosphate reductase, beta subunit [Thermomicrobium
           roseum DSM 5159]
          Length = 328

 Score =  140 bits (354), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 45/130 (34%), Positives = 74/130 (56%), Gaps = 1/130 (0%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+     ++++DESLHL+FGI +I  I  E+P + +  F ++ R ++  A  LE AY   
Sbjct: 198 GLCTIVDWVLKDESLHLSFGIHLITTILEEHPEIMSAAFGRQLRELILRAVELEEAYNRA 257

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P+  +GL+A    +Y+++IA+RR  ++GL   F    NP  WM   +D+ +  NFFE 
Sbjct: 258 VLPEPLIGLDADVLNRYVRYIADRRLEELGLPIAF-GEPNPLRWMVAQVDMPEIVNFFEA 316

Query: 123 RVTEYQQGAG 132
           R   Y+ G  
Sbjct: 317 RNIHYEVGRA 326


>gi|50843560|ref|YP_056787.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium acnes KPA171202]
 gi|282854887|ref|ZP_06264221.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289427904|ref|ZP_06429608.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|295131638|ref|YP_003582301.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|50841162|gb|AAT83829.1| ribonucleoside-diphosphate reductase beta chain [Propionibacterium
           acnes KPA171202]
 gi|282582033|gb|EFB87416.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289158787|gb|EFD06987.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|291376691|gb|ADE00546.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|313771782|gb|EFS37748.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL074PA1]
 gi|313808408|gb|EFS46875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA2]
 gi|313810605|gb|EFS48319.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA1]
 gi|313813765|gb|EFS51479.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA1]
 gi|313818171|gb|EFS55885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA2]
 gi|313821029|gb|EFS58743.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA1]
 gi|313823899|gb|EFS61613.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA2]
 gi|313827161|gb|EFS64875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA1]
 gi|313831646|gb|EFS69360.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL007PA1]
 gi|313834800|gb|EFS72514.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL056PA1]
 gi|314924366|gb|EFS88197.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL001PA1]
 gi|314927054|gb|EFS90885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA3]
 gi|314961874|gb|EFT05975.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA2]
 gi|314965892|gb|EFT09991.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA2]
 gi|314974996|gb|EFT19091.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA1]
 gi|314977908|gb|EFT22002.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL045PA1]
 gi|314979603|gb|EFT23697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA2]
 gi|314981613|gb|EFT25706.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA3]
 gi|314984684|gb|EFT28776.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA1]
 gi|314988338|gb|EFT32429.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA2]
 gi|314990428|gb|EFT34519.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA3]
 gi|315082361|gb|EFT54337.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL078PA1]
 gi|315083809|gb|EFT55785.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA2]
 gi|315087306|gb|EFT59282.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA3]
 gi|315089724|gb|EFT61700.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA1]
 gi|315092253|gb|EFT64229.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA4]
 gi|315094826|gb|EFT66802.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL060PA1]
 gi|315095599|gb|EFT67575.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL038PA1]
 gi|315104692|gb|EFT76668.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA2]
 gi|315107754|gb|EFT79730.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA1]
 gi|327326613|gb|EGE68401.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA3]
 gi|327332877|gb|EGE74609.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA2]
 gi|327335278|gb|EGE76988.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL097PA1]
 gi|327447704|gb|EGE94358.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA2]
 gi|327448579|gb|EGE95233.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA1]
 gi|327449568|gb|EGE96222.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA2]
 gi|328757395|gb|EGF71011.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL020PA1]
 gi|328762002|gb|EGF75508.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL099PA1]
          Length = 328

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 1/127 (0%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
                +++RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +
Sbjct: 197 GSLIDWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDML 256

Query: 65  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 124
           P+G +G+NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   
Sbjct: 257 PRGILGMNADYVNDYVKYLADRRLEELGFEPEYRVV-NPAKWMATANDTLQVVNFFEATN 315

Query: 125 TEYQQGA 131
           T Y+  A
Sbjct: 316 TSYEVNA 322


>gi|327328671|gb|EGE70431.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL103PA1]
          Length = 328

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 1/127 (0%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
                +++RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +
Sbjct: 197 GSLIDWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDML 256

Query: 65  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 124
           P+G +G+NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   
Sbjct: 257 PRGILGMNADYVNDYVKYLADRRLEELGFEPEYRIV-NPAKWMATANDTLQVVNFFEATN 315

Query: 125 TEYQQGA 131
           T Y+  A
Sbjct: 316 TSYEVNA 322


>gi|303258316|ref|ZP_07344319.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
 gi|302858762|gb|EFL81850.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
          Length = 328

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 4/134 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + + DE+LH    I +  +  IENP LWT   +++   +  +   LE A+ 
Sbjct: 181 MKGMGQIIAWSINDETLHTESMIRLFREYIIENPELWTDSLKKRIYDIAEKMIELEDAFI 240

Query: 61  HETMPKGFV---GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK 117
                   +    L+    + Y+++I +RR   +G++ +FK   NP PW+  ++      
Sbjct: 241 DLAFGVNDMSKQNLSPADVKAYIRWICDRRLAAMGMKEIFKVNVNPLPWVDSML-GVTHT 299

Query: 118 NFFETRVTEYQQGA 131
           NFFE RV +Y +GA
Sbjct: 300 NFFENRVVDYAKGA 313


>gi|229542075|ref|ZP_04431135.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
 gi|229326495|gb|EEN92170.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
          Length = 347

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +    YI RDE  H  F  ++I  +  E+P L T  F         E+  LE  ++
Sbjct: 207 MVGTSTMISYINRDELEHGRFISELIRAVLSEHPELNTPAFSDWVYARFRESVDLETEWS 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDL--KKEK 117
              +     G++      ++++ AN+    IGL  L+ ++ ENP  W+    D     + 
Sbjct: 267 EYVLQD-VEGIDLEEMAGFIKYRANKMLRMIGLSELYPEHVENPMKWIRAYADNFDATKT 325

Query: 118 NFFETRVTEYQQGAGLK 134
           +FFE +   Y + + L 
Sbjct: 326 DFFEQKSRSYTKVSDLN 342


>gi|84998662|ref|XP_954052.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain [Theileria annulata]
 gi|65305050|emb|CAI73375.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain, putative [Theileria annulata]
          Length = 322

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 66/116 (56%), Gaps = 9/116 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +FG  + + +K + P        +  + ++ EA ++E +Y 
Sbjct: 212 MPGLTFSNELIARDEGLHADFGCFIYHNLKHKLPE-------EAVQQIIKEAVVVERSYI 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 116
            +++P   +G+N+    QY++F+A+R    +G+ P++  T NPF WM ++I ++ +
Sbjct: 265 CDSLPCDLIGMNSQLMTQYIEFVADRLLQSLGVRPVYNVT-NPFDWM-QLISVQVK 318


>gi|50955339|ref|YP_062627.1| ribonucleotide-diphosphate reductase subunit beta [Leifsonia xyli
           subsp. xyli str. CTCB07]
 gi|50951821|gb|AAT89522.1| ribonucleoside-diphosphate reductase, beta chain [Leifsonia xyli
           subsp. xyli str. CTCB07]
          Length = 329

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 4/131 (3%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
                +++RDESLHL FGI++I  +  ENP L T EF  + + M+ +A  +E  Y  + +
Sbjct: 198 GSLIDWVVRDESLHLKFGINLILTVLEENPDLQTPEFAAEIKQMILDAVEMEEQYNRDLL 257

Query: 65  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 124
           P G +GLNA    QY++++A+RR  ++G E  +K + NP  WM+   D  +  NFFE+  
Sbjct: 258 PGGILGLNANYINQYVKYLADRRLEELGFEAEYKVS-NPAKWMATANDTLELVNFFESTN 316

Query: 125 TEY---QQGAG 132
           T Y    + + 
Sbjct: 317 TSYESNAKASS 327


>gi|328950373|ref|YP_004367708.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
 gi|328450697|gb|AEB11598.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
          Length = 332

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 1/130 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+     + ++DESLHL+FG+ +I     E   + T    ++ R ++ EA  LE AY 
Sbjct: 200 LKGLGAIIDWTLKDESLHLSFGLHLITGFLEEYSEVMTPRLAREVRGLILEAVQLERAYN 259

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +P+  +GL+A +   Y++++A+RR  ++GLE  F  T NP  WM+  +D+ +  NFF
Sbjct: 260 QALLPRPILGLSAETLNAYVEYVADRRLEELGLEAAF-GTPNPAKWMATEVDVPEIVNFF 318

Query: 121 ETRVTEYQQG 130
           E   T Y+ G
Sbjct: 319 EAVNTSYEVG 328


>gi|23100542|ref|NP_694009.1| ribonucleotide-diphosphate reductase subunit beta [Oceanobacillus
           iheyensis HTE831]
 gi|22778775|dbj|BAC15043.1| ribonucleoside-diphosphate reductase beta subunit [Oceanobacillus
           iheyensis HTE831]
          Length = 347

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +    YI RDE  H  F  ++      ENP     EF         ++  LEI ++
Sbjct: 207 MVGTSTMISYINRDELEHGRFITELFRATLEENPSHNNAEFIDWIYDRFQQSVELEIEWS 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDL--KKEK 117
           H  +     G++    + Y+++ AN+    +GLE L+  + ENP  W+   +D     + 
Sbjct: 267 HYVL-NKLEGIDMDDMDGYIKYRANKMLRMMGLEELYPQHVENPMKWVRAYVDNFDGTKT 325

Query: 118 NFFETRVTEYQQGAGLK 134
           +FFE +  +Y + + L 
Sbjct: 326 DFFEQKSRQYTKTSDLN 342


>gi|269105083|ref|ZP_06157778.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268160718|gb|EEZ39216.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 310

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 8/127 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A     I RDE LH +F   +   +         K  QQ+   +  EA  +E  +  E
Sbjct: 180 GLAASNDLIARDEGLHFSFSALLFKTLGQG------KVTQQEFEEICREAVSIEKEFVTE 233

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +G+NA    QY++  A+      G +P+F Y +NPF +M  ++D++ + NFFE 
Sbjct: 234 ALPVDLIGMNAELMCQYIEHTADVIAGLFGFDPIF-YAKNPFDYM-RLLDMEGKTNFFEK 291

Query: 123 RVTEYQQ 129
           RVTEY++
Sbjct: 292 RVTEYKR 298


>gi|313793687|gb|EFS41718.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA1]
 gi|327456018|gb|EGF02673.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL092PA1]
          Length = 328

 Score =  138 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 1/127 (0%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
                +++RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +
Sbjct: 197 GSLIDWVVRDESLHLKFGMNLILTVLEENPEIATDEFAAEIHDMIVQGVEMEEQYNRDML 256

Query: 65  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 124
           P+G  G+NA     Y++++A+RR  ++G EP ++   NP  WM+   D  +  NFFE   
Sbjct: 257 PRGIRGMNADYVNDYVKYLADRRLEELGFEPEYRVA-NPAKWMATANDTLQVVNFFEATN 315

Query: 125 TEYQQGA 131
           T Y+  A
Sbjct: 316 TSYEVNA 322


>gi|157325080|ref|YP_001468505.1| gp125 [Listeria phage A511]
 gi|66732769|gb|AAY53360.1| gp57 [Listeria phage P100]
 gi|66733088|gb|AAY52906.1| gp125 [Listeria phage A511]
          Length = 343

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  ENP L T E           A  LE A++
Sbjct: 203 MTGTGKIISFINRDELAHSKFISELIRAIVGENPELQTDELNDYVYASFRHAVELEQAWS 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E +  G  G++      Y+++ AN+    +GL+P++  +TEN   W+    D   + + 
Sbjct: 263 SEVLQ-GIEGIDVEEMLDYVKYRANKMLGMLGLQPMYQGHTENSMTWIKAYADNFTETKT 321

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 322 DFFEMRNSSYKK 333


>gi|295401051|ref|ZP_06811025.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312112173|ref|YP_003990489.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
 gi|294976844|gb|EFG52448.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311217274|gb|ADP75878.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
          Length = 346

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++    +  ++  E P   T E  +  +    +A  LEI +A
Sbjct: 206 MVATSTMINYINRDEHIHVDLFAKIFKEVLSEYPEYNTPELAEFVQATFTKAAELEIEWA 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS--EVIDLKKEK 117
           +  +     G++      Y++F AN R HQ+G E  F  Y  NP  W+   E +DL  + 
Sbjct: 266 NYIIGNDIDGIDMHDLSAYIKFYANVRAHQLGFERPFAGYRTNPLRWIKAYEEVDL-GKS 324

Query: 118 NFFETRVTEYQQ 129
           +FFE +  +Y +
Sbjct: 325 DFFEQKSRQYTK 336


>gi|50288235|ref|XP_446546.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525854|emb|CAG59473.1| unnamed protein product [Candida glabrata]
          Length = 335

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 9/132 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A    +I RD   + +F   +         HL TK   +    ++ EA  +E A+ 
Sbjct: 190 MPGVAMATNHICRDRGFYADFACLLF-------AHLKTKPNPKIIEQIITEAVEIEKAHY 242

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             +MP   +G++    +QY++ +A++     G E  +  T NPFP+M E   +  + NFF
Sbjct: 243 RNSMPIEKLGMDLKEIDQYIESVADKLLVSFGNEKFYNAT-NPFPFMEEATSI-GKTNFF 300

Query: 121 ETRVTEYQQGAG 132
           E +V++YQ+ + 
Sbjct: 301 EKKVSDYQKASA 312


>gi|328722535|ref|XP_001944897.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Acyrthosiphon pisum]
          Length = 345

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 9/125 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G+    + I RDE LH +F   +         HL  K        ++ +A  +E  + 
Sbjct: 220 MLGLTFSNELIFRDEGLHTDFACLLFK-------HLDQKPPLTVITHIICKAVTIEQYFL 272

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              +    VG++     +Y++F+A+R  +++G   +++ + NPFP+M  ++  + + N F
Sbjct: 273 TNALLVKMVGMSCEKMAEYIEFVADRLLNELGCPAVYR-SSNPFPFMD-LLSQQGKTNGF 330

Query: 121 ETRVT 125
           E RV 
Sbjct: 331 EKRVR 335


>gi|257467364|ref|ZP_05631675.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315918494|ref|ZP_07914734.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313692369|gb|EFS29204.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 344

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     +I +IK ENP+ + +E   + R M   A   EI + 
Sbjct: 204 MVGTSDVIRLINRDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK---- 115
              +    +G+   + E Y +++AN R   IGL P++   T+NP+  +    D +     
Sbjct: 261 EHIIGNRVLGITTETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNV 320

Query: 116 EKNFFETRVTEYQQGAGLK-WD 136
           + NFFE  VT Y   + +  WD
Sbjct: 321 KSNFFEGTVTSYNMSSSIDGWD 342


>gi|257453171|ref|ZP_05618470.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           3_1_5R]
 gi|317059706|ref|ZP_07924191.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
 gi|313685382|gb|EFS22217.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
          Length = 344

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     +I +IK ENP+ + +E   + R M   A   EI + 
Sbjct: 204 MVGTSDVIRLINRDELSHVVLFQKIIREIKAENPNFFQEE---EIRMMFQTAVEQEILWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK---- 115
              +    +G+   + E Y +++AN R   IGL P++   T+NP+  +    D +     
Sbjct: 261 EHIIGNRVLGITTETTEAYTKWLANERLRTIGLAPMYDGFTKNPYKHLERFADTEGDGNV 320

Query: 116 EKNFFETRVTEYQQGAGLK-WD 136
           + NFFE  VT Y   + +  WD
Sbjct: 321 KSNFFEGTVTSYNMSSSIDGWD 342


>gi|167462363|ref|ZP_02327452.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
          Length = 343

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 73/133 (54%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G     ++I RDE +H+     +  ++  ENP L  +E  +  R    +A  LEIA++
Sbjct: 203 MLGTNTMIRFINRDEEIHVRLFTQIFRELIAENPELDNEETHEFVRQTFRKAAELEIAWS 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEV-IDLKKEKN 118
              +   F G+ +   ++Y++F+AN+R +++G+E  F+ +  N   W+     +   + +
Sbjct: 263 EYIIGDRFDGVTSRDLDKYVRFMANKRVNELGIERPFEGHRRNNLRWIKAYEENDAGKTD 322

Query: 119 FFETRVTEYQQGA 131
           FFE+RVT+Y + +
Sbjct: 323 FFESRVTQYVKVS 335


>gi|118500933|gb|ABK97635.1| ribonucleoside diphosphate reductase beta subunit [Allochromatium
           vinosum DSM 180]
          Length = 280

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 62/92 (67%), Positives = 74/92 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQ+QYI+RDES+H+NFGIDVINQIKIENPHLWT +F+Q+   M+ EA  LE  YA
Sbjct: 189 MTGTAEQFQYILRDESMHMNFGIDVINQIKIENPHLWTPDFRQELVGMIREAVELEARYA 248

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIG 92
           H+TMP+G +GLNA   E Y+ FIANRRC QIG
Sbjct: 249 HDTMPRGVLGLNAQMFEDYLHFIANRRCAQIG 280


>gi|28493649|ref|NP_787810.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei str. Twist]
 gi|28572842|ref|NP_789622.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei TW08/27]
 gi|28410975|emb|CAD67360.1| ribonucleotide-diphosphate reductase small chain [Tropheryma
           whipplei TW08/27]
 gi|28476691|gb|AAO44779.1| ribonucleotide reductase beta chain [Tropheryma whipplei str.
           Twist]
          Length = 327

 Score =  137 bits (347), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
                +I+RDESLHL FGI++I  +  ENP L T +F  + R M+     +E  Y H+ +
Sbjct: 198 GSLIDWIVRDESLHLKFGINLILTVLEENPDLQTSDFADEIRGMIIAGVEMEEEYNHDLL 257

Query: 65  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 124
           P G +GLN+    QY++++A+RR  ++G +P +  T NP  WM+   D  +  NFFE   
Sbjct: 258 PNGILGLNSGYINQYVKYLADRRLEELGFDPEYNVT-NPAKWMATANDTFELVNFFEAIN 316

Query: 125 TEY 127
           T Y
Sbjct: 317 TSY 319


>gi|254796877|ref|YP_003081714.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           risticii str. Illinois]
 gi|254590113|gb|ACT69475.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           risticii str. Illinois]
          Length = 286

 Score =  137 bits (347), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 3/138 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   Y +RDE+LH N    +     +EN     K  + + R +       E A+ 
Sbjct: 142 MKGMGQIIAYSVRDETLHSNSITKLFRTFLLENDIDKLK-LEAEIREICDAMVHHEDAFI 200

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   ++Y+++IAN R  Q+G   +++   NP  W+  V++  +  NF
Sbjct: 201 DLAFEMGDVEGLKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNF 260

Query: 120 FETRVTEYQQGAGL-KWD 136
           FE + TEY + A    WD
Sbjct: 261 FENKATEYSKAATKGTWD 278


>gi|239826135|ref|YP_002948759.1| ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
 gi|239806428|gb|ACS23493.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
          Length = 346

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++    +  ++  E P   T E  Q  R    +A  LEI +A
Sbjct: 206 MVATSTMINYINRDEHIHVDLFAKIFKEVLNEYPEYNTPELAQFVRETFIKAAKLEIEWA 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS--EVIDLKKEK 117
           +  +     G++      Y++F AN R HQ+G +  F  Y  NP  W+   E +DL  + 
Sbjct: 266 NYIIGNDIDGIDMHDLSAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDL-GKS 324

Query: 118 NFFETRVTEYQQ 129
           +FFE +  +Y +
Sbjct: 325 DFFEQKSRQYTK 336


>gi|269963257|ref|ZP_06177590.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
 gi|269832005|gb|EEZ86131.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
          Length = 310

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 8/127 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A     I RDE LH +F   +   +         K  QQ+   +  EA  +E  +  E
Sbjct: 180 GLAASNDLIARDEGLHFSFSALLFKTLGQG------KVTQQEFEEICREAVSIEKEFVTE 233

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +G+NA    QY++  A+      G  P+F   ENPF +M  ++D++ + NFFE 
Sbjct: 234 ALPVDLIGMNAELMCQYIEHTADVIAGLFGFTPIF-GAENPFDYM-RLLDMEGKTNFFEK 291

Query: 123 RVTEYQQ 129
           RVTEY++
Sbjct: 292 RVTEYKR 298


>gi|315304277|ref|ZP_07874626.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           ivanovii FSL F6-596]
 gi|313627356|gb|EFR96140.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           ivanovii FSL F6-596]
          Length = 349

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E M  G  G++      Y+++ AN+    +G+  L+  ++EN   W+    D   + + 
Sbjct: 269 EEVMQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|269468252|gb|EEZ79942.1| ribonucleotide-diphosphate reductase subunit beta [uncultured SUP05
           cluster bacterium]
          Length = 319

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 7/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    KE + +   M  EA   E
Sbjct: 165 MEGNAKIIKMIARDEALHLTGTQHMLNLMRDGKDDPDMEKIAKECENEVIQMFKEACEQE 224

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDL- 113
             +A      G  +GLNA   +QY+++I N R + +GL+P+F ++  NP PW++  +D  
Sbjct: 225 KDWAEYLFRDGSMIGLNADILKQYLEYITNVRMNALGLKPIFDEHVTNPLPWINSWLDSD 284

Query: 114 KKEKNFFETRVTEYQQGA 131
             +    ET +T Y   A
Sbjct: 285 NVQVAPQETEITSYLVSA 302


>gi|237738278|ref|ZP_04568759.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
 gi|229420158|gb|EEO35205.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
          Length = 348

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G ++  + I RDE  H+     +I +++ ENP+ +    +     M  +A   EI++ 
Sbjct: 208 MMGTSDIIRLINRDELSHVVIFQQMIKEVQNENPNFFD---ENIIYEMFEKAVEQEISWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK---- 115
           +  +    +G+   + E Y +++AN R   IGL+PL++ Y +NP+  +    D +     
Sbjct: 265 NHIIGGNILGITEKTTESYTKWLANERLKSIGLQPLYEGYEKNPYKHLERFADTEGEGNV 324

Query: 116 EKNFFETRVTEYQQGAGLK-WD 136
           + NFFE  VT Y   + ++ WD
Sbjct: 325 KANFFEGTVTSYNMSSSVEGWD 346


>gi|295098106|emb|CBK87196.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 420

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 269 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAAIAEECKQECYDLFVQAAQQE 328

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 329 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 388

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 389 VQVAPQEVEVSSY 401


>gi|288549884|ref|ZP_06390831.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317051|gb|EFC55989.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
          Length = 420

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 269 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGTDDPEMAAIAEECKQECYDLFVQAAQQE 328

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 329 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 388

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 389 VQVAPQEVEVSSY 401


>gi|261419130|ref|YP_003252812.1| ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|319765947|ref|YP_004131448.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
 gi|261375587|gb|ACX78330.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|317110813|gb|ADU93305.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
          Length = 346

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++    +  ++  E P   T E     R    +A  LEI +A
Sbjct: 206 MVATSTMINYINRDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWA 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS--EVIDLKKEK 117
            E +     G++    E Y++F AN R HQ+G +  F  Y  NP  W+   E +DL  + 
Sbjct: 266 GEIIGNDIDGIDLADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDL-GKS 324

Query: 118 NFFETRVTEYQQ 129
           +FFE +  +Y +
Sbjct: 325 DFFEQKPRQYTK 336


>gi|313622843|gb|EFR93161.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           innocua FSL J1-023]
          Length = 349

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|16801322|ref|NP_471590.1| ribonucleotide-diphosphate reductase subunit beta [Listeria innocua
           Clip11262]
 gi|16414770|emb|CAC97486.1| lin2258 [Listeria innocua Clip11262]
          Length = 349

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|297530897|ref|YP_003672172.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
 gi|297254149|gb|ADI27595.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
          Length = 346

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++    +  ++  E P   T E     R    +A  LEI +A
Sbjct: 206 MVATSTMINYINRDEHIHVDLFAKIFKEVLNEYPEYRTPELSDFVRETFTKAAELEIEWA 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS--EVIDLKKEK 117
            E +     G++    E Y++F AN R HQ+G +  F  Y  NP  W+   E +DL  + 
Sbjct: 266 GEIIGNDIDGIDLADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDL-GKS 324

Query: 118 NFFETRVTEYQQ 129
           +FFE +  +Y +
Sbjct: 325 DFFEQKPRQYTK 336


>gi|319655055|ref|ZP_08009124.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
 gi|317393250|gb|EFV74019.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
          Length = 345

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 2/131 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++  + +  +I  ENP L T E  +  +     A  LEI +A
Sbjct: 205 MVATSTMINYINRDEQIHVDLFVKIFKEILQENPELNTNELSKFVQETFKRAAELEIEWA 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKN 118
            + +     G+     E Y++F AN RC+Q+G E  F+ Y  NP  W+     +   + +
Sbjct: 265 RDVIGSKTEGILLSDVEAYIKFYANIRCNQLGYERPFEGYRTNPLRWIVAYEQVDHGKSD 324

Query: 119 FFETRVTEYQQ 129
           FFE +  +Y +
Sbjct: 325 FFEQKSRQYTK 335


>gi|300723737|ref|YP_003713044.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
           nematophila ATCC 19061]
 gi|297630261|emb|CBJ90912.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
           nematophila ATCC 19061]
          Length = 376

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    KE +QK   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQKCYDLFVDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFKDGSMIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|46908387|ref|YP_014776.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes str. 4b F2365]
 gi|47091823|ref|ZP_00229618.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 4b H7858]
 gi|226224761|ref|YP_002758868.1| ribonucleoside-diphosphate reductase, subunit beta [Listeria
           monocytogenes Clip81459]
 gi|254825283|ref|ZP_05230284.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J1-194]
 gi|254853280|ref|ZP_05242628.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL R2-503]
 gi|254931734|ref|ZP_05265093.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes HPB2262]
 gi|255519998|ref|ZP_05387235.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J1-175]
 gi|300764038|ref|ZP_07074034.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL N1-017]
 gi|46881658|gb|AAT04953.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47019834|gb|EAL10572.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 4b H7858]
 gi|225877223|emb|CAS05937.1| Putative ribonucleoside-diphosphate reductase, subunit beta
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|258606640|gb|EEW19248.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL R2-503]
 gi|293583289|gb|EFF95321.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes HPB2262]
 gi|293594529|gb|EFG02290.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J1-194]
 gi|300515379|gb|EFK42430.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL N1-017]
 gi|313617790|gb|EFR90013.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           innocua FSL S4-378]
 gi|328465961|gb|EGF37142.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 1816]
 gi|328472177|gb|EGF43048.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 220]
          Length = 349

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|329922162|ref|ZP_08277907.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. HGF5]
 gi|328942352|gb|EGG38619.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. HGF5]
          Length = 370

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  ++   YI RDE+ H  F  +V  Q+  + P L TKE        +  A  LE  +A
Sbjct: 229 MMATSQMISYIQRDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWA 288

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID---LKKE 116
           H T+     G++      Y+++IANRR   +GLE  ++  + N  PW+    D      +
Sbjct: 289 HYTLSN-VRGIDLNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATK 347

Query: 117 KNFFETRVTEYQQGA 131
            +FFE +   Y +  
Sbjct: 348 TDFFEAKSRNYGKVG 362


>gi|239993885|ref|ZP_04714409.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii ATCC 27126]
          Length = 376

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G ++  + I RDE+LHL+    ++N      ++P +    +E ++++R +   A   E
Sbjct: 225 MEGNSKIIRLIARDENLHLSSTQHILNLWAKGKDDPEMAQIAEECKEEARAIFMNAVEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL-K 114
             +A      G  +GLN     QY+++IAN+R   IGL+  F+ + NP PWM+  ++   
Sbjct: 285 KQWADYLFQNGSMIGLNKEILCQYVEYIANQRMSAIGLDTPFEISSNPLPWMNNYLNSDN 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E+ ++ Y   Q  + +  D
Sbjct: 345 VQVAPQESEISSYLVGQIDSAVSED 369


>gi|163801385|ref|ZP_02195284.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
 gi|159174874|gb|EDP59674.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
          Length = 310

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 8/127 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A     I RDE LH +F   +   +         K  QQ+   +  EA  +E  +  E
Sbjct: 180 GLAASNDLIARDEGLHFSFSALLFKTLGQG------KVTQQEFEEICREAVSIEKEFVTE 233

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +P   +G+NA    QY++  A+      G  P F  +ENPF +M  ++D++ + NFFE 
Sbjct: 234 ALPVDLIGMNAELMCQYIEHTADVIADLFGFNPAF-GSENPFDYM-RLLDMEGKTNFFEK 291

Query: 123 RVTEYQQ 129
           RVTEY++
Sbjct: 292 RVTEYKR 298


>gi|16804193|ref|NP_465678.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes EGD-e]
 gi|116873587|ref|YP_850368.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|217963685|ref|YP_002349363.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes HCC23]
 gi|224500181|ref|ZP_03668530.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes Finland 1988]
 gi|224501047|ref|ZP_03669354.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL R2-561]
 gi|254826956|ref|ZP_05231643.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL N3-165]
 gi|254831409|ref|ZP_05236064.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 10403S]
 gi|255028522|ref|ZP_05300473.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes LO28]
 gi|284802601|ref|YP_003414466.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5578]
 gi|284995743|ref|YP_003417511.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5923]
 gi|290893101|ref|ZP_06556089.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J2-071]
 gi|16411624|emb|CAD00232.1| lmo2154 [Listeria monocytogenes EGD-e]
 gi|116742465|emb|CAK21589.1| ribonucleoside-diphosphate reductase beta chain [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|217332955|gb|ACK38749.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes HCC23]
 gi|258599337|gb|EEW12662.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL N3-165]
 gi|284058163|gb|ADB69104.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5578]
 gi|284061210|gb|ADB72149.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5923]
 gi|290557263|gb|EFD90789.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J2-071]
 gi|307571740|emb|CAR84919.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes L99]
          Length = 349

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|47095728|ref|ZP_00233334.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254899145|ref|ZP_05259069.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes J0161]
 gi|254912714|ref|ZP_05262726.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
 gi|254937041|ref|ZP_05268738.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes F6900]
 gi|47015871|gb|EAL06798.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258609644|gb|EEW22252.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes F6900]
 gi|293590709|gb|EFF99043.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
          Length = 349

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|325294459|ref|YP_004280973.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064907|gb|ADY72914.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 352

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 7/141 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+  +YI RDE  H+      +  +  E    +    + K   M   A   E  ++
Sbjct: 212 MQGTADIIRYINRDELTHVILFEHFMKDLTDEEFKKYLP--KDKIYEMFKVAVNQEQRFS 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK----E 116
            + +    +G+N  S E+Y  ++AN+R   +GL+P+F  T NP+  +  + D       +
Sbjct: 270 KKVIGNKILGMNEKSIEEYTYYVANKRLKALGLDPIFPDTPNPYEHLERIADTGGEGNVK 329

Query: 117 KNFFETRVTEYQQGAGLK-WD 136
            NFFE  VT Y Q + ++ WD
Sbjct: 330 ANFFEATVTSYNQASAVEGWD 350


>gi|56419447|ref|YP_146765.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           kaustophilus HTA426]
 gi|56379289|dbj|BAD75197.1| ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           kaustophilus HTA426]
          Length = 346

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++    +  ++  E P   T E     R    +A  LEI +A
Sbjct: 206 MVATSTMINYINRDEHIHVDLFAKIFKEVLNEYPEYRTPELADFVRNTFMKAAELEIEWA 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS--EVIDLKKEK 117
            E +     G++    E Y++F AN R HQ+G +  F  Y  NP  W+   E +DL  + 
Sbjct: 266 REIIGNDIDGIDLADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDL-GKS 324

Query: 118 NFFETRVTEYQQ 129
           +FFE +  +Y +
Sbjct: 325 DFFEQKPRQYTK 336


>gi|255023762|ref|ZP_05295748.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J1-208]
          Length = 284

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T E  + +      A  LE  ++
Sbjct: 144 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTDELVEYTHDAFRHAVELETEWS 203

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 204 EEVLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 262

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 263 DFFEMRNSSYKK 274


>gi|315283233|ref|ZP_07871471.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           marthii FSL S4-120]
 gi|313613124|gb|EFR87028.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           marthii FSL S4-120]
          Length = 349

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTDELVEYTHEAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|78486104|ref|YP_392029.1| ribonucleotide-diphosphate reductase subunit beta [Thiomicrospira
           crunogena XCL-2]
 gi|78364390|gb|ABB42355.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Thiomicrospira crunogena XCL-2]
          Length = 377

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL+    +IN +    ++P +    KE ++K   +  EA   E
Sbjct: 226 MEGNAKIIKLIARDEALHLSGTQHLINILSEGKDDPEMMEIAKENEEKVYEIFREAAEQE 285

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLNA   + Y+++I N R   I L P+F+   NP PWM + ++   
Sbjct: 286 KEWADYLFKDGSMIGLNASILKDYVEYITNTRIKAIKLNPIFENKSNPLPWMNNWLVSDN 345

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E+ ++ Y   Q  + +  D
Sbjct: 346 VQVAPQESEISSYLVGQVDSTVDKD 370


>gi|261404531|ref|YP_003240772.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
 gi|261280994|gb|ACX62965.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
          Length = 343

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  ++   YI RDE+ H  F  +V  Q+  + P L TKE        +  A  LE  +A
Sbjct: 202 MMATSQMISYIQRDENQHCYFFAEVFKQLLKDFPELNTKENIDYLYRTIDRAVELETNWA 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID---LKKE 116
           H T+     G++      Y+++IANRR   +GLE  ++  + N  PW+    D      +
Sbjct: 262 HYTLSN-VRGIDLNELSDYIKYIANRRITMMGLEKAYEGVDVNCMPWIKPFSDEALNATK 320

Query: 117 KNFFETRVTEYQQGA 131
            +FFE +   Y +  
Sbjct: 321 TDFFEAKSRNYGKVG 335


>gi|291461082|ref|ZP_06026838.2| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379059|gb|EFE86577.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
          Length = 348

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P  ++ E      +M   A   EI + 
Sbjct: 208 MVGTSDIIRLINRDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK---- 115
              +    +G+ + + E Y +++AN R   +GLEPL+  + +NP+  +    D +     
Sbjct: 265 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNV 324

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE  VT Y   + + 
Sbjct: 325 KSNFFEGTVTSYNMSSSID 343


>gi|308067265|ref|YP_003868870.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
 gi|305856544|gb|ADM68332.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
          Length = 343

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 5/135 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  ++   YI RDE+ H  F  +V  Q+  + P L TKE       M++ A  LE  +A
Sbjct: 202 MMATSQMISYIQRDENQHCYFFAEVFKQLLSDFPELNTKENTDYVYRMINRAVELETNWA 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID---LKKE 116
           H T+ K   G++      Y++++AN R   +G++  ++  + N  PW+    D      +
Sbjct: 262 HYTL-KEVRGIDLNELSDYIKYMANMRLRLLGMDKAYEGVDVNCMPWIKPFSDEALNATK 320

Query: 117 KNFFETRVTEYQQGA 131
            +FFE +   Y +  
Sbjct: 321 TDFFEAKSRNYGKVG 335


>gi|282598964|ref|YP_003358881.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
 gi|257219034|gb|ACV50049.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
          Length = 346

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 3/135 (2%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            G+ +  ++ +RDE +H+     +  ++  E+P L T E +++   +       E  +  
Sbjct: 195 KGLTKINKWSLRDEGIHVEGSSLLYRKVMGEHPWLMTDEHKKQVYDLARAVVAAEDLFLD 254

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK---N 118
               K  + +     + Y++++ NRR  Q+G + +F+    P PW+ E++     K   N
Sbjct: 255 LAFKKYQLTMTKDESKAYVRYMMNRRLLQLGHKAIFEVQGIPCPWIEEILGGAGGKRDSN 314

Query: 119 FFETRVTEYQQGAGL 133
           FFETRV  YQ    L
Sbjct: 315 FFETRVDNYQASGAL 329


>gi|255018022|ref|ZP_05290148.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL F2-515]
          Length = 267

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 127 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWS 186

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 187 EEVLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 245

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 246 DFFEMRNSSYKK 257


>gi|237738722|ref|ZP_04569203.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
 gi|229423825|gb|EEO38872.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
          Length = 344

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P  ++ E      +M   A   EI + 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK---- 115
              +    +G+ + + E Y +++AN R   +GLEPL+  + +NP+  +    D +     
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNV 320

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE  VT Y   + + 
Sbjct: 321 KSNFFEGTVTSYNMSSSID 339


>gi|289435502|ref|YP_003465374.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289171746|emb|CBH28292.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|313632343|gb|EFR99385.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           seeligeri FSL N1-067]
 gi|313636848|gb|EFS02469.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           seeligeri FSL S4-171]
          Length = 349

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVDLETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|326560494|gb|EGE10876.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 7169]
 gi|326570427|gb|EGE20467.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC8]
 gi|326575699|gb|EGE25622.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis CO72]
 gi|326577166|gb|EGE27060.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis O35E]
          Length = 376

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
            A+A+     G  +GLN     QY++FI N R   IGL  +F+   NP PW++  +    
Sbjct: 285 KAWANYLFKDGSMIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    ET +T Y
Sbjct: 345 VQVAPQETEITTY 357


>gi|257062099|ref|YP_003139987.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
 gi|256592265|gb|ACV03152.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
          Length = 355

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I + +   PH        +   M   A   E  + 
Sbjct: 215 MPGSADIFKMINRDELSHVRLYQKLIPEARKVFPH-----SVDQIYDMFDRAVKYECQWT 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-- 115
           +  +    +G+   S EQY +++AN R   IGL+PL+    Y ++P+  +    D KK  
Sbjct: 270 NHIVGNNILGITEASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEA 329

Query: 116 --EKNFFETRVTEYQQGAGLK-WD 136
             + NFFE  VT Y   +G+  WD
Sbjct: 330 HTKANFFEATVTSYVMSSGITGWD 353


>gi|218249013|ref|YP_002374384.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
 gi|218169491|gb|ACK68228.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
          Length = 344

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I + +   PH        +   M   A   E  + 
Sbjct: 204 MPGSADIFKMINRDELSHVRLYQKLIPEARKVFPH-----SVDQIYDMFDRAVKYECQWT 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-- 115
           +  +    +G+   S EQY +++AN R   IGL+PL+    Y ++P+  +    D KK  
Sbjct: 259 NHIVGNNILGITEASTEQYTKYLANIRLRSIGLDPLYPDIKYNKSPYTHLERFSDTKKEA 318

Query: 116 --EKNFFETRVTEYQQGAGLK-WD 136
             + NFFE  VT Y   +G+  WD
Sbjct: 319 HTKANFFEATVTSYVMSSGITGWD 342


>gi|254523600|ref|ZP_05135655.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
 gi|219721191|gb|EED39716.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
          Length = 346

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  ENP L T E           A  LE  ++
Sbjct: 206 MTGTGKIISFINRDELAHTKFISELIRAIIGENPELQTNELTAYVHQAFEHAIELETQWS 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L+   T+N  PW+    D   + + 
Sbjct: 266 SEVL-DGIDGIDVEEMTRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKT 324

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 325 DFFEMRNASYKK 336


>gi|294782021|ref|ZP_06747353.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
 gi|294481832|gb|EFG29601.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
          Length = 344

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P  ++ E      +M   A   EI + 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSIVKEIKNDYPEFFSAE---TIYSMFKTAVEQEINWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK---- 115
              +    +G+ + + E Y +++AN R   +GLEPL+  + +NP+  +    D +     
Sbjct: 261 EHIIGNRVLGITSQTTEVYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNV 320

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE  VT Y   + + 
Sbjct: 321 KSNFFEGTVTSYNMSSSID 339


>gi|331642864|ref|ZP_08343999.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
 gi|331039662|gb|EGI11882.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
          Length = 449

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 298 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 357

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 358 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 417

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 418 VQVAPQEVEVSSY 430


>gi|296113118|ref|YP_003627056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella
           catarrhalis RH4]
 gi|295920812|gb|ADG61163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella
           catarrhalis RH4]
          Length = 380

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E
Sbjct: 229 MEGNAKIIKMIARDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQE 288

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
            A+A+     G  +GLN     QY++FI N R   IGL  +F+   NP PW++  +    
Sbjct: 289 KAWANYLFKDGSMIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDN 348

Query: 115 KEKNFFETRVTEY 127
            +    ET +T Y
Sbjct: 349 VQVAPQETEITTY 361


>gi|331653669|ref|ZP_08354670.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
 gi|331048518|gb|EGI20594.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
          Length = 449

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 298 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 357

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 358 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 417

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 418 VQVAPQEVEVSSY 430


>gi|326560111|gb|EGE10501.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 46P47B1]
 gi|326564174|gb|EGE14410.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 12P80B1]
 gi|326573404|gb|EGE23372.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 101P30B1]
          Length = 376

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
            A+A+     G  +GLN     QY++FI N R   IGL  +F+   NP PW++  +    
Sbjct: 285 KAWANYLFKDGSMIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    ET +T Y
Sbjct: 345 VQVAPQETEITTY 357


>gi|256027986|ref|ZP_05441820.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           D11]
          Length = 348

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+ 
Sbjct: 208 MVGTSDIIRLINRDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK---- 115
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     
Sbjct: 265 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 324

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE  VT Y   + + 
Sbjct: 325 KSNFFEGTVTSYNMSSSID 343


>gi|299822182|ref|ZP_07054068.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
           DSM 20601]
 gi|299815711|gb|EFI82949.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
           DSM 20601]
          Length = 349

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T E    +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTDELVAYTHDAFRHAVELETIWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E M  G  G++      Y+++ AN+    +G+  L+  ++EN   W+    D   + + 
Sbjct: 269 EEVME-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSENTMTWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 328 DFFEMRNSSYKK 339


>gi|213021870|ref|ZP_03336317.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 277

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 126 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 185

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 186 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 245

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 246 VQVAPQEVEVSSY 258


>gi|319785673|ref|YP_004145148.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464185|gb|ADV25917.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
          Length = 354

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T E           A  LE  + 
Sbjct: 214 MAGTGKIISFINRDELAHTKFISEVIRAIVGENPELQTDELADYVHLAFRHAIELETQWT 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L+ + T+N  PW+    D   + + 
Sbjct: 274 GEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIESLYTETTDNVMPWIRAYADNFTETKT 332

Query: 118 NFFETRVTEYQQGAG 132
           +FFE R   Y++   
Sbjct: 333 DFFEMRNASYKKTNA 347


>gi|110806205|ref|YP_689725.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 5 str. 8401]
 gi|110615753|gb|ABF04420.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 5 str. 8401]
 gi|281601680|gb|ADA74664.1| putative ribonucleotide reductase, beta subunit [Shigella flexneri
           2002017]
          Length = 453

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 302 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 361

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 362 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 421

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 422 VQVAPQEVEVSSY 434


>gi|311278798|ref|YP_003941029.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
 gi|308747993|gb|ADO47745.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
          Length = 376

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|88608725|ref|YP_506404.1| ribonucleotide-diphosphate reductase subunit beta [Neorickettsia
           sennetsu str. Miyayama]
 gi|88600894|gb|ABD46362.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           sennetsu str. Miyayama]
          Length = 322

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 3/138 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   Y +RDE+LH N    +     +EN     K  + + R + +     E A+ 
Sbjct: 178 MKGMGQIIAYSVRDETLHSNSITKLFRTFLLENNIDKFK-LEAEIREICNAMVHHEDAFI 236

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                 G   GL A   ++Y+++IAN R  Q+G   +++   NP  W+  V++  +  NF
Sbjct: 237 DLAFEMGDVEGLKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVLNTVEHTNF 296

Query: 120 FETRVTEYQQGAGL-KWD 136
           FE + TEY + A    WD
Sbjct: 297 FENKATEYSKAATKGTWD 314


>gi|157879968|pdb|1RNR|A Chain A, Autocatalytic Generation Of Dopa In The Engineered Protein
           R2 F208y From Escherichia Coli Ribonucleotide Reductase
           And Crystal Structure Of The Dopa-208 Protein
 gi|157879969|pdb|1RNR|B Chain B, Autocatalytic Generation Of Dopa In The Engineered Protein
           R2 F208y From Escherichia Coli Ribonucleotide Reductase
           And Crystal Structure Of The Dopa-208 Protein
          Length = 375

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW++  ++   
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDN 343

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 344 VQVAPQEVEVSSY 356


>gi|310639978|ref|YP_003944736.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
 gi|309244928|gb|ADO54495.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
          Length = 343

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 5/135 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  ++   YI RDE+ H  F  +V  Q+  + P L TKE       M++ A  LE  +A
Sbjct: 202 MMATSQMISYIQRDENQHCYFFAEVFKQLLADFPELNTKENMDYVYRMINRAVELETNWA 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID---LKKE 116
           H T+ K   G++      Y++++AN R   +G++  ++  + N  PW+    D      +
Sbjct: 262 HYTL-KEVRGIDLNELSDYIKYMANMRLRLLGMDKAYEGVDINSMPWIKPFSDEALNATK 320

Query: 117 KNFFETRVTEYQQGA 131
            +FFE +   Y +  
Sbjct: 321 TDFFEAKSRNYGKVG 335


>gi|161502570|ref|YP_001569682.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160863917|gb|ABX20540.1| hypothetical protein SARI_00614 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 376

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMADIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|332141553|ref|YP_004427291.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327551575|gb|AEA98293.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 376

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G ++  + I RDE+LHL+    ++N      ++P +    +E ++++R +   A   E
Sbjct: 225 MEGNSKIIRLIARDENLHLSSTQHILNLWAKGKDDPEMAQIAQECKEEARAIFMNAVEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL-K 114
             +A      G  +GLN     QY+++IAN+R   IGL+  F  + NP PWM+  ++   
Sbjct: 285 KEWADYLFKTGSMIGLNKEILCQYVEYIANQRMSAIGLDTPFDISSNPLPWMNNYLNSDN 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E+ ++ Y   Q  + +  D
Sbjct: 345 VQVAPQESEISSYLVGQIDSAVSED 369


>gi|226327851|ref|ZP_03803369.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
 gi|225203555|gb|EEG85909.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
          Length = 376

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAEECEQECYDLFVEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A     +G  +GLN     QY+++I N R   +GL+  FK   NP PW++  ++   
Sbjct: 285 KEWAEYLFSEGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFKARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|290473788|ref|YP_003466662.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
           bovienii SS-2004]
 gi|289173095|emb|CBJ79868.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
           bovienii SS-2004]
          Length = 376

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIARECEQQCYDLFVQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|494379|pdb|1MRR|A Chain A, Substitution Of Manganese For Iron In Ribonucleotide
           Reductase From Escherichia Coli. Spectroscopic And
           Crystallographic Characterization
 gi|494380|pdb|1MRR|B Chain B, Substitution Of Manganese For Iron In Ribonucleotide
           Reductase From Escherichia Coli. Spectroscopic And
           Crystallographic Characterization
 gi|494553|pdb|1RIB|A Chain A, Structure And Function Of The Escherichia Coli
           Ribonucleotide Reductase Protein R2
 gi|494554|pdb|1RIB|B Chain B, Structure And Function Of The Escherichia Coli
           Ribonucleotide Reductase Protein R2
          Length = 375

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW++  ++   
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDN 343

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 344 VQVAPQEVEVSSY 356


>gi|326565416|gb|EGE15593.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 103P14B1]
          Length = 376

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++   ++P +    +  Q+++  +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLNGTQHMINLMRQGRDDPDMVAIAEACQEEAIEIFKSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
            A+A+     G  +GLN     QY++FI N R   IGL  +F+   NP PW++  +    
Sbjct: 285 KAWANYLFKDGSMIGLNRDILCQYIEFITNTRMSAIGLPAIFETKTNPIPWINAWLSSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    ET +T Y
Sbjct: 345 VQVAPQETEITTY 357


>gi|326796346|ref|YP_004314166.1| ribonucleoside-diphosphate reductase [Marinomonas mediterranea
           MMB-1]
 gi|326547110|gb|ADZ92330.1| Ribonucleoside-diphosphate reductase [Marinomonas mediterranea
           MMB-1]
          Length = 377

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +    +E +Q+   +  EA   E
Sbjct: 226 MEGNAKIIKLIARDEALHLTGTQHMLNLMTSGKDDPEMAIIAQECRQEITDIFIEAAQQE 285

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLNA    QY+++I+N R   +GLEP F+   NP PW++  ++   
Sbjct: 286 KEWAKYLFKDGSMIGLNAEILGQYVEYISNVRMQAVGLEPAFETKSNPIPWINAWLVSDN 345

Query: 115 KEKNFFETRVTEY 127
            +    E  ++ Y
Sbjct: 346 VQVAPQEAEISSY 358


>gi|289765931|ref|ZP_06525309.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
 gi|289717486|gb|EFD81498.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
          Length = 344

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+ 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK---- 115
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 320

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE  VT Y   + + 
Sbjct: 321 KSNFFEGTVTSYNMSSSID 339


>gi|42543283|pdb|1PIY|A Chain A, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At
           Neutral Ph
 gi|42543284|pdb|1PIY|B Chain B, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At
           Neutral Ph
 gi|42543506|pdb|1R65|A Chain A, Crystal Structure Of Ferrous Soaked Ribonucleotide
           Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli
 gi|42543507|pdb|1R65|B Chain B, Crystal Structure Of Ferrous Soaked Ribonucleotide
           Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli
          Length = 375

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW++  ++   
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDN 343

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 344 VQVAPQEVEVSSY 356


>gi|324020907|gb|EGB90126.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 117-3]
          Length = 420

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 269 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 328

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 329 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 388

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 389 VQVAPQEVEVSSY 401


>gi|254303614|ref|ZP_04970972.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148323806|gb|EDK89056.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 344

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+ 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEIAWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK---- 115
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 320

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE  VT Y   + + 
Sbjct: 321 KSNFFEGTVTSYNMSSSID 339


>gi|56412825|ref|YP_149900.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197361758|ref|YP_002141394.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|56127082|gb|AAV76588.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197093234|emb|CAR58679.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 376

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|260497963|ref|ZP_05816079.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
 gi|260196471|gb|EEW94002.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
          Length = 344

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EIA+ 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSIVKEIKNDFPNFFSAE---TVYSMFKTAVEQEIAWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK---- 115
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 320

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE  VT Y   + + 
Sbjct: 321 KSNFFEGTVTSYNMSSSID 339


>gi|33358114|pdb|1PIM|A Chain A, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
           Subunit, D84e Mutant
 gi|33358115|pdb|1PIM|B Chain B, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
           Subunit, D84e Mutant
 gi|33358116|pdb|1PIU|A Chain A, Oxidized Ribonucleotide Reductase R2-D84e Mutant
           Containing Oxo-Bridged Diferric Cluster
 gi|33358117|pdb|1PIU|B Chain B, Oxidized Ribonucleotide Reductase R2-D84e Mutant
           Containing Oxo-Bridged Diferric Cluster
 gi|42543285|pdb|1PIZ|A Chain A, Ribonucleotide Reductase R2 D84e Mutant Soaked With
           Ferrous Ions At Neutral Ph
 gi|42543286|pdb|1PIZ|B Chain B, Ribonucleotide Reductase R2 D84e Mutant Soaked With
           Ferrous Ions At Neutral Ph
          Length = 375

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW++  ++   
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDN 343

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 344 VQVAPQEVEVSSY 356


>gi|42543287|pdb|1PJ0|A Chain A, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH
           Ferrous Ions At Neutral Ph
 gi|42543288|pdb|1PJ0|B Chain B, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH
           Ferrous Ions At Neutral Ph
 gi|42543289|pdb|1PJ1|A Chain A, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS
           Ions At Ph 5
 gi|42543290|pdb|1PJ1|B Chain B, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS
           Ions At Ph 5
          Length = 375

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW++  ++   
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWLVSDN 343

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 344 VQVAPQEVEVSSY 356


>gi|205353394|ref|YP_002227195.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205273175|emb|CAR38137.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|326628485|gb|EGE34828.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 376

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|290508492|ref|ZP_06547863.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
           1_1_55]
 gi|289777886|gb|EFD85883.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
           1_1_55]
          Length = 405

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E
Sbjct: 254 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQE 313

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 314 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 373

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 374 VQVAPQEVEVSSY 386


>gi|37526941|ref|NP_930285.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36786374|emb|CAE15427.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide
           reductase 1) (B2 protein) (R2 protein) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 376

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    KE +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAKECEQQCYDLFVQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A     +G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFSEGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|227356095|ref|ZP_03840485.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis ATCC 29906]
 gi|227163740|gb|EEI48652.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis ATCC 29906]
          Length = 376

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A     +G  +GLN     QY+++I N R   +GL+  FK   NP PW++  ++   
Sbjct: 285 KEWAEYLFSEGSMIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|16765605|ref|NP_461220.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|62180851|ref|YP_217268.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161613001|ref|YP_001586966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167549728|ref|ZP_02343487.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992612|ref|ZP_02573709.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168237293|ref|ZP_02662351.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168242393|ref|ZP_02667325.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168261709|ref|ZP_02683682.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168466025|ref|ZP_02699895.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168817991|ref|ZP_02829991.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194442577|ref|YP_002041539.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194449379|ref|YP_002046332.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194735273|ref|YP_002115349.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197247637|ref|YP_002147234.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197262505|ref|ZP_03162579.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198242288|ref|YP_002216347.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200387602|ref|ZP_03214214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929071|ref|ZP_03220214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|207857697|ref|YP_002244348.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|213161593|ref|ZP_03347303.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|224583238|ref|YP_002637036.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|1172945|sp|P37427|RIR2_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|510349|emb|CAA51453.1| nrdB [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|16420817|gb|AAL21179.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|62128484|gb|AAX66187.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161362365|gb|ABX66133.1| hypothetical protein SPAB_00707 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401240|gb|ACF61462.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194407683|gb|ACF67902.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194710775|gb|ACF89996.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195631367|gb|EDX49927.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197211340|gb|ACH48737.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197240760|gb|EDY23380.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197289678|gb|EDY29041.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197936804|gb|ACH74137.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199604700|gb|EDZ03245.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204321615|gb|EDZ06814.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205325266|gb|EDZ13105.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329222|gb|EDZ15986.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205338588|gb|EDZ25352.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205344845|gb|EDZ31609.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205349363|gb|EDZ35994.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709500|emb|CAR33844.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224467765|gb|ACN45595.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|261247486|emb|CBG25313.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994368|gb|ACY89253.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301158836|emb|CBW18349.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312913268|dbj|BAJ37242.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320086715|emb|CBY96487.1| ribonucleoside diphosphage reductase 1, beta subunit, B2
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321223022|gb|EFX48093.1| Ribonucleotide reductase of class Ia aerobic, beta subunit
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322617030|gb|EFY13936.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322617664|gb|EFY14563.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624706|gb|EFY21535.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322630255|gb|EFY27025.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322634436|gb|EFY31169.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322639146|gb|EFY35838.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322640143|gb|EFY36809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322645769|gb|EFY42293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651544|gb|EFY47919.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322656105|gb|EFY52404.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322659457|gb|EFY55704.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322665919|gb|EFY62102.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322669843|gb|EFY65984.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322673828|gb|EFY69925.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322678586|gb|EFY74642.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322683618|gb|EFY79632.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322687694|gb|EFY83664.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|322715327|gb|EFZ06898.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
 gi|323130608|gb|ADX18038.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|323196209|gb|EFZ81366.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323198377|gb|EFZ83479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323204185|gb|EFZ89196.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323208571|gb|EFZ93510.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323212337|gb|EFZ97160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218256|gb|EGA02966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323222986|gb|EGA07335.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323227421|gb|EGA11586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323232251|gb|EGA16354.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323235716|gb|EGA19800.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323241124|gb|EGA25160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323244866|gb|EGA28868.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323248577|gb|EGA32508.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323251597|gb|EGA35465.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323255474|gb|EGA39237.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323263076|gb|EGA46622.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323268136|gb|EGA51613.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323270771|gb|EGA54209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
 gi|326624097|gb|EGE30442.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 376

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|168229641|ref|ZP_02654699.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194471700|ref|ZP_03077684.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|238913487|ref|ZP_04657324.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|194458064|gb|EDX46903.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205335835|gb|EDZ22599.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 376

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|16761204|ref|NP_456821.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29141101|ref|NP_804443.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|25285831|pir||AD0791 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503503|emb|CAD07510.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29136727|gb|AAO68292.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
          Length = 376

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|332100965|gb|EGJ04311.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
          Length = 420

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 269 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 328

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 329 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 388

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 389 VQVAPQEVEVSSY 401


>gi|90412217|ref|ZP_01220223.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           profundum 3TCK]
 gi|90326941|gb|EAS43326.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           profundum 3TCK]
          Length = 377

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +  + ++P +    +E QQ+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFEIFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWM-SEVIDL 113
             +A      G  +GLN     QY+++I N R   +GL+  +    +NP PW+ S +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKEILCQYVEYITNLRMKAVGLDQAYPGANQNPIPWINSWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|197285594|ref|YP_002151466.1| ribonucleotide-diphosphate reductase subunit beta [Proteus
           mirabilis HI4320]
 gi|194683081|emb|CAR43612.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis HI4320]
          Length = 376

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A     +G  +GLN     QY+++I N R   +GL+  FK   NP PW++  ++   
Sbjct: 285 KEWAEYLFSEGSMIGLNKEILCQYVEYITNIRMQAVGLKLPFKARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|62866936|gb|AAY17359.1| ribonucleotide reductase small subunit [Haemonchus contortus]
          Length = 374

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 9/126 (7%)

Query: 9   QYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGF 68
             I  DE +H    +  I  IK        K  Q++   ++ +A  +E  +  E++P   
Sbjct: 245 SLIQGDEGVHAISHVCCIQHIK-------NKLSQERIYYIIRDAVAIEQEFLSESLPVDM 297

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
           +G+N     QY++++A+    ++G E + K ++NPF +M E I +  + NFFE +V+EYQ
Sbjct: 298 IGMNCRLMCQYIEYVADHLLVELGCEKICK-SKNPFDFM-ENISIDGKTNFFEKKVSEYQ 355

Query: 129 QGAGLK 134
           +   L 
Sbjct: 356 RPGVLS 361


>gi|213646443|ref|ZP_03376496.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
 gi|289824706|ref|ZP_06544205.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
          Length = 240

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 89  MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 148

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 149 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 208

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 209 VQVAPQEVEVSSY 221


>gi|138894466|ref|YP_001124919.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247935|ref|ZP_03146637.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
 gi|134265979|gb|ABO66174.1| Ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|196212719|gb|EDY07476.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
          Length = 344

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE +H++    +  ++  E P   T E    +R+   +A  LEI +A
Sbjct: 204 MVATSTMINYINRDEHIHVDLFAKIFKEVLNEYPEYRTPELADFARSTFMKAAELEIEWA 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS--EVIDLKKEK 117
            E +     G++    E Y++F AN R HQ+G +  F  Y  NP  W+   E +DL  + 
Sbjct: 264 GEIIGNDIDGIDLADLEAYIKFYANVRAHQLGFDRPFDGYRTNPLRWIKAYEEVDL-GKS 322

Query: 118 NFFETRVTEYQQ 129
           +FFE +  +Y +
Sbjct: 323 DFFEQKPRQYTK 334


>gi|238895770|ref|YP_002920506.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238548088|dbj|BAH64439.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 396

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E
Sbjct: 245 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQE 304

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 305 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 364

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 365 VQVAPQEVEVSSY 377


>gi|237742881|ref|ZP_04573362.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
 gi|229430529|gb|EEO40741.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
          Length = 344

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EI + 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK---- 115
              +    +G+ + + E Y +++AN R   +GLEPL+  + +NP+  +    D +     
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLYSGFNKNPYKHLERFADTEGEGNV 320

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE  VT Y   + + 
Sbjct: 321 KSNFFEGTVTSYNMSSSID 339


>gi|117624429|ref|YP_853342.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           APEC O1]
 gi|237704711|ref|ZP_04535192.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|115513553|gb|ABJ01628.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           APEC O1]
 gi|226901077|gb|EEH87336.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|323952030|gb|EGB47904.1| ribonucleotide reductase [Escherichia coli H252]
 gi|323956004|gb|EGB51757.1| ribonucleotide reductase [Escherichia coli H263]
          Length = 420

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 269 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 328

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 329 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 388

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 389 VQVAPQEVEVSSY 401


>gi|67921622|ref|ZP_00515140.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
 gi|67856734|gb|EAM51975.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
          Length = 321

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I + +   PH       ++   M   A   E  + 
Sbjct: 181 MPGSADIFKMINRDELSHVRLYQKLIPEARKVFPH-----SVEQIYEMFDMAVNYECRWT 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-- 115
           +  +    +G+   S E+Y +++AN R   IGLEPL+    Y+++P+  +    D KK  
Sbjct: 236 NHIVGNNILGITESSTEKYTKYLANIRLRSIGLEPLYPEPKYSKSPYTHLERFSDTKKAA 295

Query: 116 --EKNFFETRVTEYQQGAGLK-WD 136
             + NFFE  VT Y   +GL  WD
Sbjct: 296 HTKANFFEATVTSYVMSSGLTGWD 319


>gi|285016983|ref|YP_003374694.1| ribonucleotide-diphosphate reductase beta subunit protein
           [Xanthomonas albilineans GPE PC73]
 gi|283472201|emb|CBA14708.1| probable ribonucleotide-diphosphate reductase beta subunit protein
           [Xanthomonas albilineans]
          Length = 346

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L T E           A  LE  ++
Sbjct: 206 MTGTGKIISFINRDELAHTKFISELIRAIIGENAELQTNELTDYVHQAFEHAIRLETEWS 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E +  G  G++     QY+++ AN+    +G+E L+   ++N  PW+    D   + + 
Sbjct: 266 SEVL-DGIEGIDVDEMIQYVKYRANKMSGMLGIEKLYTGASDNVMPWIKAYADNFTETKT 324

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 325 DFFEMRNASYKK 336


>gi|90581239|ref|ZP_01237037.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
           S14]
 gi|90437610|gb|EAS62803.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
           S14]
          Length = 377

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLLRNGHDDPEMAEIAAECEQECFDIFKAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWM-SEVIDL 113
             +A      G  +GLN     QY+++I N R   +GL P +   T+NP PW+ S +   
Sbjct: 285 KEWADYLFKDGSMIGLNKQILCQYVEYITNLRMVAVGLRPAYDGATQNPIPWINSWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|54309624|ref|YP_130644.1| ribonucleotide-diphosphate reductase subunit beta [Photobacterium
           profundum SS9]
 gi|46914062|emb|CAG20842.1| putative ribonucleoside-diphosphate reductase,beta subunit
           [Photobacterium profundum SS9]
          Length = 377

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +  + ++P +    +E QQ+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLLRGRHDDPEMADIAQECQQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWM-SEVIDL 113
             +A      G  +GLN     QY+++I N R   +GLE  +    +NP PW+ S +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKEILCQYVEYITNLRMKAVGLEQAYPGANQNPIPWINSWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|40889712|pdb|1RSR|A Chain A, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
           Ribonucleotide Reductase
 gi|40889713|pdb|1RSR|B Chain B, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
           Ribonucleotide Reductase
          Length = 375

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 343

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 344 VQVAPQEVEVSSY 356


>gi|300936793|ref|ZP_07151685.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
 gi|300458078|gb|EFK21571.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
          Length = 405

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 254 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 313

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 314 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 373

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 374 VQVAPQEVEVSSY 386


>gi|170019452|ref|YP_001724406.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ATCC 8739]
 gi|187775748|ref|ZP_02798054.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|188024880|ref|ZP_02774660.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|189010171|ref|ZP_02805091.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|189402101|ref|ZP_02779989.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|189403050|ref|ZP_02792862.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|189404930|ref|ZP_02812148.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|189405663|ref|ZP_02823406.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|208806716|ref|ZP_03249053.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208812585|ref|ZP_03253914.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208820390|ref|ZP_03260710.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209398142|ref|YP_002271641.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|293415528|ref|ZP_06658171.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
 gi|300948933|ref|ZP_07162994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|300958921|ref|ZP_07171024.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|307138893|ref|ZP_07498249.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           H736]
 gi|169754380|gb|ACA77079.1| Ribonucleoside-diphosphate reductase [Escherichia coli ATCC 8739]
 gi|187771218|gb|EDU35062.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|188016038|gb|EDU54160.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|189002108|gb|EDU71094.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|189357709|gb|EDU76128.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|189362845|gb|EDU81264.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|189372811|gb|EDU91227.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|189378868|gb|EDU97284.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|208726517|gb|EDZ76118.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208733862|gb|EDZ82549.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208740513|gb|EDZ88195.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209159542|gb|ACI36975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|291433176|gb|EFF06155.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
 gi|300314424|gb|EFJ64208.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|300451587|gb|EFK15207.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|315136867|dbj|BAJ44026.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           DH1]
 gi|320192144|gb|EFW66789.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC1212]
 gi|320641061|gb|EFX10540.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. G5101]
 gi|320646450|gb|EFX15369.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. 493-89]
 gi|320651547|gb|EFX19927.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. H 2687]
 gi|320657299|gb|EFX25101.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320667818|gb|EFX34726.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323936632|gb|EGB32918.1| ribonucleotide reductase [Escherichia coli E1520]
 gi|323941071|gb|EGB37258.1| ribonucleotide reductase [Escherichia coli E482]
 gi|326344044|gb|EGD67805.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1044]
          Length = 389

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 238 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 297

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 298 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 357

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 358 VQVAPQEVEVSSY 370


>gi|61680624|pdb|1YFD|A Chain A, Crystal Structure Of The Y122h Mutant Of Ribonucleotide
           Reductase R2 Protein From E. Coli
 gi|61680625|pdb|1YFD|B Chain B, Crystal Structure Of The Y122h Mutant Of Ribonucleotide
           Reductase R2 Protein From E. Coli
          Length = 375

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 343

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 344 VQVAPQEVEVSSY 356


>gi|87120532|ref|ZP_01076426.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
           MED121]
 gi|86164175|gb|EAQ65446.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
           MED121]
          Length = 377

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +    KE + ++  +  EA   E
Sbjct: 226 MEGNAKIIKLIARDEALHLTGTQHILNLMASGKDDPEMEDIAKECEDEAYQIFFEAAEQE 285

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLNA    QY+++I N R   IGL P F+   NP PW++  ++   
Sbjct: 286 KEWASYLFKDGSMIGLNAQILGQYVEYITNIRMQAIGLLPTFETKHNPIPWINAWLVSDN 345

Query: 115 KEKNFFETRVTEY 127
            +    E  ++ Y
Sbjct: 346 VQVAPQEAEISSY 358


>gi|324112772|gb|EGC06748.1| ribonucleotide reductase [Escherichia fergusonii B253]
          Length = 389

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 238 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 297

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 298 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 357

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 358 VQVAPQEVEVSSY 370


>gi|304445703|pdb|2XOF|A Chain A, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of
           E. Coli
 gi|304445704|pdb|2XOF|B Chain B, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of
           E. Coli
          Length = 375

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 343

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 344 VQVAPQEVEVSSY 356


>gi|193068232|ref|ZP_03049196.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|300903617|ref|ZP_07121535.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300926340|ref|ZP_07142140.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|301328725|ref|ZP_07221778.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|30041924|gb|AAP17650.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 2a str. 2457T]
 gi|56383622|gb|AAN43832.2| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 2a str. 301]
 gi|192958511|gb|EDV88950.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|300404353|gb|EFJ87891.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300417617|gb|EFK00928.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|300844873|gb|EFK72633.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|315255170|gb|EFU35138.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 85-1]
          Length = 389

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 238 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 297

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 298 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 357

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 358 VQVAPQEVEVSSY 370


>gi|19703451|ref|NP_603013.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19713529|gb|AAL94312.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 348

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EI + 
Sbjct: 208 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK---- 115
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     
Sbjct: 265 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 324

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE  VT Y   + + 
Sbjct: 325 KSNFFEGTVTSYNMSSSID 343


>gi|1942079|pdb|1XIK|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|1942080|pdb|1XIK|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|15825694|pdb|1JPR|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Nitric Oxide
 gi|15825695|pdb|1JPR|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Nitric Oxide
 gi|15826771|pdb|1JQC|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Hydrogen Peroxide And Hydroxylamine
 gi|15826772|pdb|1JQC|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Hydrogen Peroxide And Hydroxylamine
 gi|29726528|pdb|1MXR|A Chain A, High Resolution Structure Of Ribonucleotide Reductase R2
           From E. Coli In Its Oxidised (Met) Form
 gi|29726529|pdb|1MXR|B Chain B, High Resolution Structure Of Ribonucleotide Reductase R2
           From E. Coli In Its Oxidised (Met) Form
          Length = 375

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 343

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 344 VQVAPQEVEVSSY 356


>gi|291283479|ref|YP_003500297.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2
           [Escherichia coli O55:H7 str. CB9615]
 gi|290763352|gb|ADD57313.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2
           [Escherichia coli O55:H7 str. CB9615]
          Length = 389

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 238 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 297

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 298 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 357

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 358 VQVAPQEVEVSSY 370


>gi|189403970|ref|ZP_02786340.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|217327202|ref|ZP_03443285.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|301026864|ref|ZP_07190263.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|301647674|ref|ZP_07247468.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|189368305|gb|EDU86721.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|217319569|gb|EEC27994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|260448673|gb|ACX39095.1| Ribonucleoside-diphosphate reductase [Escherichia coli DH1]
 gi|299879524|gb|EFI87735.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|301074204|gb|EFK89010.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|326339582|gb|EGD63393.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1125]
          Length = 393

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 242 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 301

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 302 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 361

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 362 VQVAPQEVEVSSY 374


>gi|294501621|ref|YP_003565321.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium QM B1551]
 gi|295706969|ref|YP_003600044.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium DSM 319]
 gi|294351558|gb|ADE71887.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium QM B1551]
 gi|294804628|gb|ADF41694.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium DSM 319]
          Length = 347

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE LH+     +  ++  ENP   T+E +        EA  LEI +A
Sbjct: 205 MVATSTMINYINRDEQLHVGLFEKIFKEVLNENPAYRTEELETFVVETFQEAARLEIEWA 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEP-LFKYT--ENPFPWMSEVIDLK-KE 116
              + + F G+     +QY++++AN+RC+Q+G     F     ENP  W+    ++   +
Sbjct: 265 ESVIGEKFDGITMKELQQYIEYMANKRCNQLGFGRAAFPEAPIENPLRWIIAYQEVDLGK 324

Query: 117 KNFFETRVTEYQQGA 131
            +FFE +  +Y + +
Sbjct: 325 TDFFEQKSRQYTKAS 339


>gi|194427189|ref|ZP_03059740.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194436109|ref|ZP_03068211.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|300918603|ref|ZP_07135191.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300931418|ref|ZP_07146747.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|301303305|ref|ZP_07209430.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|194414810|gb|EDX31081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194424837|gb|EDX40822.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|300414255|gb|EFJ97565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300460788|gb|EFK24281.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|300841479|gb|EFK69239.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|323961541|gb|EGB57149.1| ribonucleotide reductase [Escherichia coli H489]
 gi|323973062|gb|EGB68256.1| ribonucleotide reductase [Escherichia coli TA007]
          Length = 393

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 242 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 301

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 302 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 361

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 362 VQVAPQEVEVSSY 374


>gi|256846215|ref|ZP_05551673.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
 gi|256719774|gb|EEU33329.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
          Length = 344

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EI + 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK---- 115
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 320

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE  VT Y   + + 
Sbjct: 321 KSNFFEGTVTSYNMSSSID 339


>gi|331663742|ref|ZP_08364652.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
 gi|323977567|gb|EGB72653.1| ribonucleotide reductase [Escherichia coli TW10509]
 gi|331059541|gb|EGI31518.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
          Length = 389

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 238 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 297

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 298 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 357

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 358 VQVAPQEVEVSSY 370


>gi|332093862|gb|EGI98916.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           boydii 5216-82]
          Length = 376

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|331658316|ref|ZP_08359278.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
 gi|307626227|gb|ADN70531.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UM146]
 gi|331056564|gb|EGI28573.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
          Length = 389

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 238 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 297

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 298 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 357

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 358 VQVAPQEVEVSSY 370


>gi|296082342|emb|CBI21347.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 6/111 (5%)

Query: 28  QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 83
           QI IEN H    L  K  +++ + ++ ++  +E  +  + +P   VG+N+    QY++F+
Sbjct: 102 QIAIENIHSEILLRNKLSEERVKAIVADSVDIEREFVCDALPCALVGMNSALMSQYIEFV 161

Query: 84  ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGLK 134
           A+R    +G   ++  + NPF WM E+I L+ + NFFE RV EYQ+ + + 
Sbjct: 162 ADRLLGALGYGKMYNVS-NPFDWM-ELISLQGKTNFFEKRVGEYQKASVMS 210


>gi|227328222|ref|ZP_03832246.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 376

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E  V+ Y   Q  + +  D
Sbjct: 345 VQVAPQEVEVSSYLVGQIDSEISDD 369


>gi|239502693|ref|ZP_04662003.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
          Length = 309

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 6/138 (4%)

Query: 1   MVGIAEQYQYIMRDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M+G A+  +YI RDE   HL+    +++ ++ EN  ++T+ F  K+  +   ++ +EI++
Sbjct: 175 MLGSADMIRYIQRDEEGTHLDLFAHMLDTLRHENKDVFTQSFWNKALEVFLTSSEMEISW 234

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDLKK-EK 117
                 KG    N  + E Y++ +AN R  QI      +   +NPFPW+ +       EK
Sbjct: 235 GKYIT-KGVT--NPKAIEDYIKHLANLRAEQIQAPFVPYPGVKNPFPWVEQFSKPNTSEK 291

Query: 118 NFFETRVTEYQQGAGLKW 135
           NFFETRVT+Y+ G  L W
Sbjct: 292 NFFETRVTDYKVGGALVW 309


>gi|296329016|ref|ZP_06871523.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296153909|gb|EFG94720.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 348

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EI + 
Sbjct: 208 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK---- 115
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     
Sbjct: 265 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 324

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE  VT Y   + + 
Sbjct: 325 KSNFFEGTVTSYNMSSSID 343


>gi|253687496|ref|YP_003016686.1| ribonucleotide reductase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754074|gb|ACT12150.1| ribonucleotide reductase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 376

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E  V+ Y   Q  + +  D
Sbjct: 345 VQVAPQEVEVSSYLVGQIDSEISDD 369


>gi|227114436|ref|ZP_03828092.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 376

 Score =  133 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E  V+ Y   Q  + +  D
Sbjct: 345 VQVAPQEVEVSSYLVGQIDSEISDD 369


>gi|326783875|ref|YP_004324269.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
 gi|310003887|gb|ADO98282.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
          Length = 388

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVI-NQIKIENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDE+ HL    +++ N +  ++P +     E +     M   A   E 
Sbjct: 236 MEGSAKIISLISRDENQHLVLTQNILKNWMNGDDPEMKQIADEERNNVIGMFRNAVEEEK 295

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLK 114
            +A      G  +GLN     QY+++IAN+R   +G +P++      NP PW    I  K
Sbjct: 296 EWAEYLFSGGSMIGLNDKLLNQYVEWIANKRMKALGFDPIYDQPLRNNPLPWTQHWISSK 355

Query: 115 K-EKNFFETRVTEYQQGAGLKWD 136
             +    ET V  Y  G  +K D
Sbjct: 356 GLQVAPQETEVESYVVGG-IKQD 377


>gi|317130866|ref|YP_004097148.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
 gi|315475814|gb|ADU32417.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
          Length = 345

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 67/133 (50%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE  H+    ++  ++  E P L +++  +  +    +   LEI +A
Sbjct: 205 MVSTSTMINYINRDEQHHVYLFANIFKELMHEYPELNSEKTHRFVQETFKKGAELEINWA 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKN 118
              +     G++    E Y++F+AN+R +++G+E  F+ Y  NP  W+    D+   + +
Sbjct: 265 KYIIGDQMEGIDIGDLEAYIKFMANKRVNELGVERPFEGYRNNPMRWIKIYEDVNSGKTD 324

Query: 119 FFETRVTEYQQGA 131
           FFE +  +Y + +
Sbjct: 325 FFEQKSRQYTKVS 337


>gi|284929768|ref|YP_003422290.1| ribonucleotide reductase, subunit beta [cyanobacterium UCYN-A]
 gi|284810212|gb|ADB95909.1| ribonucleotide reductase, beta subunit [cyanobacterium UCYN-A]
          Length = 354

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I + +   PH       ++   M   A   E  + 
Sbjct: 214 MPGSADIFKMINRDELSHVRLYQKLIPEARKVFPH-----STEQIYEMFDTAVNHECRWT 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK-- 115
           +  +    +G+   S EQY +++AN R   IGLEPL+   ++T++P+  +    D KK  
Sbjct: 269 NHIVGSNILGITESSTEQYTKYLANIRLRSIGLEPLYTGEEFTKSPYSHLERFSDTKKDG 328

Query: 116 --EKNFFETRVTEYQQGAGLK-WD 136
             + NFFE+ VT Y   +G+  WD
Sbjct: 329 HTKANFFESTVTSYVMSSGVSGWD 352


>gi|317048919|ref|YP_004116567.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
 gi|316950536|gb|ADU70011.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
          Length = 376

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E + +   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECYDLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW+ S ++   
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|261822457|ref|YP_003260563.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           wasabiae WPP163]
 gi|261606470|gb|ACX88956.1| ribonucleotide reductase [Pectobacterium wasabiae WPP163]
          Length = 376

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFQTRTNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E  V+ Y   Q  + +  D
Sbjct: 345 VQVAPQEVEVSSYLVGQIDSEISDD 369


>gi|312967536|ref|ZP_07781751.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 2362-75]
 gi|312287733|gb|EFR15638.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 2362-75]
          Length = 359

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 208 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 268 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 327

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 328 VQVAPQEVEVSSY 340


>gi|15802782|ref|NP_288809.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 EDL933]
 gi|15832372|ref|NP_311145.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. Sakai]
 gi|16130170|ref|NP_416738.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|82544520|ref|YP_408467.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           Sb227]
 gi|82777644|ref|YP_403993.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae Sd197]
 gi|89109052|ref|AP_002832.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli str. K-12 substr. W3110]
 gi|157161718|ref|YP_001459036.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           HS]
 gi|170081853|ref|YP_001731173.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187731010|ref|YP_001881065.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           CDC 3083-94]
 gi|188495860|ref|ZP_03003130.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|195935609|ref|ZP_03080991.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC4024]
 gi|218548311|ref|YP_002382102.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ATCC 35469]
 gi|218705765|ref|YP_002413284.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UMN026]
 gi|238901409|ref|YP_002927205.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|254794126|ref|YP_003078963.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. TW14359]
 gi|256022083|ref|ZP_05435948.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           4_1_40B]
 gi|261223312|ref|ZP_05937593.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259138|ref|ZP_05951671.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. FRIK966]
 gi|293405702|ref|ZP_06649694.1| nrdB [Escherichia coli FVEC1412]
 gi|293410599|ref|ZP_06654175.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|298381383|ref|ZP_06990982.1| nrdB [Escherichia coli FVEC1302]
 gi|309785072|ref|ZP_07679705.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella
           dysenteriae 1617]
 gi|312973510|ref|ZP_07787682.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1827-70]
 gi|57014104|sp|P69924|RIR2_ECOLI RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|57014105|sp|P69925|RIR2_ECO57 RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|12516573|gb|AAG57364.1|AE005456_1 ribonucleoside diphosphage reductase 1, beta subunit, B2
           [Escherichia coli O157:H7 str. EDL933]
 gi|146967|gb|AAA24224.1| ribonucleoside diphosphate reductase B2 subunit precursor
           [Escherichia coli]
 gi|1788567|gb|AAC75295.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|1799582|dbj|BAA16054.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli str. K12 substr. W3110]
 gi|13362587|dbj|BAB36541.1| ribonucleoside-diphosphate reductase 1 beta subunit [Escherichia
           coli O157:H7 str. Sakai]
 gi|81241792|gb|ABB62502.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           dysenteriae Sd197]
 gi|81245931|gb|ABB66639.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           boydii Sb227]
 gi|157067398|gb|ABV06653.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli HS]
 gi|169889688|gb|ACB03395.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187428002|gb|ACD07276.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella boydii
           CDC 3083-94]
 gi|188491059|gb|EDU66162.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|218355852|emb|CAQ88465.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia fergusonii ATCC 35469]
 gi|218432862|emb|CAR13756.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli UMN026]
 gi|238863475|gb|ACR65473.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|254593526|gb|ACT72887.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|284922226|emb|CBG35308.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           042]
 gi|291427910|gb|EFF00937.1| nrdB [Escherichia coli FVEC1412]
 gi|291471067|gb|EFF13551.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|298278825|gb|EFI20339.1| nrdB [Escherichia coli FVEC1302]
 gi|308927442|gb|EFP72916.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella
           dysenteriae 1617]
 gi|309702545|emb|CBJ01872.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           ETEC H10407]
 gi|310332105|gb|EFP99340.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1827-70]
 gi|315615496|gb|EFU96128.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 3431]
 gi|320184866|gb|EFW59654.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri CDC 796-83]
 gi|320663001|gb|EFX30318.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|327252504|gb|EGE64163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli STEC_7v]
 gi|332094036|gb|EGI99088.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           boydii 3594-74]
          Length = 376

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|320175005|gb|EFW50120.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae CDC 74-1112]
          Length = 376

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|304414248|ref|ZP_07395616.1| ribonucleotide reductase beta subunit [Candidatus Regiella
           insecticola LSR1]
 gi|304283462|gb|EFL91858.1| ribonucleotide reductase beta subunit [Candidatus Regiella
           insecticola LSR1]
          Length = 381

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++   ++P +    KE Q     +  +A   E
Sbjct: 230 MEGNAKIIKLIARDEALHLTGTQHIINLMREGTDDPEMAEIAKECQNNCFELFKKAAEQE 289

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   FK   NP PW++  +    
Sbjct: 290 KEWATYLFRDGSMIGLNKDILCQYIEYITNIRMQAVGLALPFKIRSNPIPWINAWLSSDN 349

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 350 VQVAPQEVEVSSY 362


>gi|300897697|ref|ZP_07116095.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|301022393|ref|ZP_07186277.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|331683911|ref|ZP_08384507.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
 gi|300358575|gb|EFJ74445.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|300397543|gb|EFJ81081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|323967677|gb|EGB63089.1| ribonucleotide reductase [Escherichia coli M863]
 gi|331078863|gb|EGI50065.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
          Length = 393

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 242 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 301

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 302 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 361

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 362 VQVAPQEVEVSSY 374


>gi|218690398|ref|YP_002398610.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ED1a]
 gi|218427962|emb|CAR08882.2| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli ED1a]
          Length = 376

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|26248623|ref|NP_754663.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           CFT073]
 gi|74312755|ref|YP_311174.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sonnei
           Ss046]
 gi|91211528|ref|YP_541514.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UTI89]
 gi|110642443|ref|YP_670173.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           536]
 gi|157157492|ref|YP_001463584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           E24377A]
 gi|161485800|ref|NP_708125.3| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 301]
 gi|161486465|ref|NP_837840.2| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|191166513|ref|ZP_03028343.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|191170278|ref|ZP_03031832.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|194433322|ref|ZP_03065602.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|209919687|ref|YP_002293771.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SE11]
 gi|215487452|ref|YP_002329883.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218554798|ref|YP_002387711.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI1]
 gi|218559152|ref|YP_002392065.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           S88]
 gi|218695841|ref|YP_002403508.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           55989]
 gi|218700706|ref|YP_002408335.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI39]
 gi|227887293|ref|ZP_04005098.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 83972]
 gi|253772842|ref|YP_003035673.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162246|ref|YP_003045354.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           B str. REL606]
 gi|256017603|ref|ZP_05431468.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
 gi|260844831|ref|YP_003222609.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|260856285|ref|YP_003230176.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|260868965|ref|YP_003235367.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|293446578|ref|ZP_06663000.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|300818165|ref|ZP_07098377.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
 gi|300822109|ref|ZP_07102251.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 119-7]
 gi|300981251|ref|ZP_07175428.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|300983269|ref|ZP_07176508.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|301048988|ref|ZP_07195975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|306814652|ref|ZP_07448814.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|307311198|ref|ZP_07590842.1| ribonucleotide reductase [Escherichia coli W]
 gi|309793115|ref|ZP_07687543.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|331647890|ref|ZP_08348982.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
 gi|331668939|ref|ZP_08369787.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331678186|ref|ZP_08378861.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|26109028|gb|AAN81231.1|AE016763_190 Ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           CFT073]
 gi|73856232|gb|AAZ88939.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           sonnei Ss046]
 gi|91073102|gb|ABE07983.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           UTI89]
 gi|110344035|gb|ABG70272.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           536]
 gi|157079522|gb|ABV19230.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E24377A]
 gi|190903473|gb|EDV63192.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|190909794|gb|EDV69379.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|194418416|gb|EDX34505.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|209912946|dbj|BAG78020.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli
           SE11]
 gi|215265524|emb|CAS09927.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218352573|emb|CAU98352.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli 55989]
 gi|218361566|emb|CAQ99157.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli IAI1]
 gi|218365921|emb|CAR03663.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli S88]
 gi|218370692|emb|CAR18503.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli IAI39]
 gi|222033996|emb|CAP76737.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli LF82]
 gi|227835643|gb|EEJ46109.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 83972]
 gi|242377869|emb|CAQ32637.1| nrdB, subunit of B2 protein and GDP reductase [multifunctional]
           [Escherichia coli BL21(DE3)]
 gi|253323886|gb|ACT28488.1| ribonucleotide reductase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974147|gb|ACT39818.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           B str. REL606]
 gi|253978314|gb|ACT43984.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           BL21(DE3)]
 gi|257754934|dbj|BAI26436.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|257759978|dbj|BAI31475.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|257765321|dbj|BAI36816.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|281179326|dbj|BAI55656.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli
           SE15]
 gi|291323408|gb|EFE62836.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|294490302|gb|ADE89058.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli IHE3034]
 gi|300299180|gb|EFJ55565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|300307615|gb|EFJ62135.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|300408603|gb|EFJ92141.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|300525239|gb|EFK46308.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 119-7]
 gi|300529309|gb|EFK50371.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
 gi|305852046|gb|EFM52498.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|306908704|gb|EFN39201.1| ribonucleotide reductase [Escherichia coli W]
 gi|307554301|gb|ADN47076.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli ABU 83972]
 gi|308123401|gb|EFO60663.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|312946856|gb|ADR27683.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|313651060|gb|EFS15459.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|315061535|gb|ADT75862.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli W]
 gi|315292180|gb|EFU51532.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 153-1]
 gi|320178793|gb|EFW53756.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           ATCC 9905]
 gi|320196104|gb|EFW70728.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           WV_060327]
 gi|320199830|gb|EFW74419.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           EC4100B]
 gi|323156512|gb|EFZ42666.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli EPECa14]
 gi|323161696|gb|EFZ47579.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli E128010]
 gi|323168602|gb|EFZ54282.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           sonnei 53G]
 gi|323171914|gb|EFZ57558.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli LT-68]
 gi|323176838|gb|EFZ62428.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1180]
 gi|323184146|gb|EFZ69523.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1357]
 gi|323188037|gb|EFZ73332.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli RN587/1]
 gi|323377884|gb|ADX50152.1| Ribonucleoside-diphosphate reductase [Escherichia coli KO11]
 gi|324006608|gb|EGB75827.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 57-2]
 gi|324013118|gb|EGB82337.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 60-1]
 gi|324117882|gb|EGC11781.1| ribonucleotide reductase [Escherichia coli E1167]
 gi|325496725|gb|EGC94584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ECD227]
 gi|330912066|gb|EGH40576.1| ribonucleotide reductase of class 1a (aerobic), beta subunit
           [Escherichia coli AA86]
 gi|331043614|gb|EGI15752.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
 gi|331064133|gb|EGI36044.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331074646|gb|EGI45966.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|332096162|gb|EGJ01165.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           dysenteriae 155-74]
          Length = 376

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|170682190|ref|YP_001744431.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SMS-3-5]
 gi|170519908|gb|ACB18086.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli SMS-3-5]
 gi|315285847|gb|EFU45287.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 110-3]
 gi|315298059|gb|EFU57328.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 16-3]
          Length = 393

 Score =  133 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 242 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 301

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 302 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 361

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 362 VQVAPQEVEVSSY 374


>gi|294784669|ref|ZP_06749957.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
 gi|294486383|gb|EFG33745.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
          Length = 344

 Score =  133 bits (336), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EI + 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK---- 115
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 320

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE  VT Y   + + 
Sbjct: 321 KSNFFEGTVTSYNMSSSID 339


>gi|237743586|ref|ZP_04574067.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
 gi|229432617|gb|EEO42829.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
          Length = 344

 Score =  133 bits (336), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 8/139 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     ++ +IK + P+ ++ E      +M   A   EI + 
Sbjct: 204 MVGTSDIIRLINRDELSHVVLFRSMVKEIKNDFPNFFSAE---TIYSMFKTAVEQEITWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK---- 115
              +    +G+ + + E Y +++AN R   +GLEPLF  + +NP+  +    D +     
Sbjct: 261 EHIIGNRVLGITSQTTEAYTKWLANERLKSLGLEPLFSGFNKNPYKHLERFADTEGEGNV 320

Query: 116 EKNFFETRVTEYQQGAGLK 134
           + NFFE  VT Y   + + 
Sbjct: 321 KSNFFEGTVTSYNMSSSID 339


>gi|163803511|ref|ZP_02197381.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
 gi|159172687|gb|EDP57538.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
          Length = 377

 Score =  133 bits (336), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDESLHLN    +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDESLHLNGTQHMINLLRNGQDDFIFMQIAEEVKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPKAYPEATTNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|170767354|ref|ZP_02901807.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
 gi|170123688|gb|EDS92619.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
          Length = 376

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|94499220|ref|ZP_01305758.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
           RED65]
 gi|94428852|gb|EAT13824.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
           RED65]
          Length = 376

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 6/137 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++    +  ++P +     E +++   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMMQIWALGKDDPEMGEIANECKKQVIEIFREAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N+R   IGL+ +F+  +NP PW++  ++   
Sbjct: 285 KDWAEYLFKDGSMIGLNKDILCQYVEYITNQRLGAIGLDNIFETRQNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEYQQGA 131
            +    E  ++ Y  GA
Sbjct: 345 VQVAPQEAEISSYLVGA 361


>gi|268591162|ref|ZP_06125383.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
 gi|291313388|gb|EFE53841.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
          Length = 378

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +  +A   E
Sbjct: 227 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEQECYDLFVQAAEQE 286

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A     +G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 287 KEWADYLFSEGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDN 346

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 347 VQVAPQEVEVSSY 359


>gi|87311395|ref|ZP_01093515.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
 gi|87285807|gb|EAQ77721.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
          Length = 313

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 49/95 (51%), Positives = 66/95 (69%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI EQ+QYI+RDE++HLNFGID+IN IK ENP LWT EFQ +   ++ +A  LEI YA
Sbjct: 218 MTGIGEQFQYILRDETVHLNFGIDLINGIKAENPDLWTAEFQAEIIDLIKQAVELEIEYA 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEP 95
            + +P G +GLN      Y+ ++A+RR  +IGL  
Sbjct: 278 GDCLPNGILGLNRDLFRDYVHYVADRRVERIGLPK 312


>gi|310830452|ref|YP_003965553.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
 gi|309249919|gb|ADO59485.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
          Length = 342

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  ++   YI RDE+ H  F  ++  Q+ I+ P L T++ +      + EA   E  +A
Sbjct: 202 MLATSQMISYIQRDENQHCYFFAELYKQLLIDFPQLNTEQNKTFVYNFMDEAVRHETEWA 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID---LKKEK 117
              +  G  G++      Y++ IAN R   +GL   ++   N  PW+    D        
Sbjct: 262 EYVL-DGIEGIDLDEFRGYIRHIANNRLRLMGLPAAYEGVSNTMPWIRPFSDEALNDTLT 320

Query: 118 NFFETRVTEYQQGAG-LKWD 136
           + FE +   Y + +    WD
Sbjct: 321 DQFEAKPRTYTKASQDNDWD 340


>gi|297521777|ref|ZP_06940163.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           OP50]
          Length = 174

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 23  MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 82

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 83  KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 142

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 143 VQVAPQEVEVSSY 155


>gi|109287926|ref|YP_654620.1| hypothetical protein MIV048L [Invertebrate iridescent virus 3]
 gi|123878658|sp|Q197B2|RIR2_IIV3 RecName: Full=Probable ribonucleoside-diphosphate reductase small
           subunit 048L; AltName: Full=Ribonucleotide reductase
           small subunit
 gi|106073549|gb|ABF82078.1| hypothetical protein MIV048L [Aedes taeniorhynchus iridescent
           virus]
          Length = 376

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENP-HLWTKEFQQKSRTMLHEATLLEIAY 59
           M  + +  Q+ + DE+ H N  +++ + + +EN  H+     + + R    +   LE  +
Sbjct: 237 MKKMGQIIQWSIADETHHTNSMMELFSTLVVENKSHIRLGVLEARVRDTARKIVQLEDGF 296

Query: 60  AHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                  G    L A   + Y+++I NRR   +G  PL+   ENP PW+ ++++     N
Sbjct: 297 IDLAFSMGEMRQLTADDVKSYIRYITNRRLQTMGYLPLYSVVENPLPWVEDLLNAPSHTN 356

Query: 119 FFETRVTEYQQGA 131
           FFE + TEY + +
Sbjct: 357 FFENKPTEYAKAS 369


>gi|89097912|ref|ZP_01170799.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
 gi|89087414|gb|EAR66528.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
          Length = 353

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 4/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE LH++  + +  +I  E P   TKE  + + +   EA  LEI +A
Sbjct: 212 MVATSTMINYINRDEQLHVDLFVKIFREILDEYPEQNTKELAEFAESTFREAAYLEIEWA 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS--EVIDLKKEK 117
              +     G+     E+Y++F AN R +Q+G    F+ +  NP  W+   E +DL  + 
Sbjct: 272 RSIIGDKISGILIGDVEEYIRFYANVRSNQLGFNRPFEGSRTNPLRWIKAYEEVDL-GKS 330

Query: 118 NFFETRVTEYQQGAGLK 134
           +FFE +  +Y +   + 
Sbjct: 331 DFFEQKPRQYVKVNTVD 347


>gi|71033209|ref|XP_766246.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
           strain Muguga]
 gi|68353203|gb|EAN33963.1| ribonucleotide-diphosphate reductase small subunit, putative
           [Theileria parva]
          Length = 308

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 19/124 (15%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +FG  + + +K + P        +  + ++ EA ++E +Y 
Sbjct: 189 MPGLTFSNELIARDEGLHADFGCFIYHNLKHKLPE-------EAVQQIIKEAVVVERSYI 241

Query: 61  HETMPKGFVGLNA----------PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV 110
            +++P   +G+N+              QY++F+A+R    +G+ P++  T NPF WM ++
Sbjct: 242 CDSLPCDLIGMNSRKKILTHCLIELMTQYIEFVADRLLQALGVRPVYNVT-NPFDWM-QL 299

Query: 111 IDLK 114
           I ++
Sbjct: 300 ISVQ 303


>gi|194363985|ref|YP_002026595.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
 gi|194346789|gb|ACF49912.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
          Length = 339

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 2/128 (1%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+A    ++ RDES H++F  + ++ I+ E P L+  + +Q    ML EA   E+ +A +
Sbjct: 203 GLASGTNWVFRDESAHMDFAFECVDVIREEEPDLFDDKMKQDVYDMLAEAIECEVQFAED 262

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
            +  G  G++     QY+Q  A+   H++G+E  +    NP  +M E+ D+++  NFFE 
Sbjct: 263 VLSGGVAGISTRDMRQYLQHCADNHFHRLGMERKYN-VRNPLSFM-ELQDVQELTNFFER 320

Query: 123 RVTEYQQG 130
           R + YQ G
Sbjct: 321 RASAYQVG 328


>gi|157144813|ref|YP_001452132.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter
           koseri ATCC BAA-895]
 gi|157082018|gb|ABV11696.1| hypothetical protein CKO_00540 [Citrobacter koseri ATCC BAA-895]
          Length = 376

 Score =  133 bits (335), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  I++P +    +E +Q    +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGIDDPEMAEIAEESKQACYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GLE  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLELPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|152997008|ref|YP_001341843.1| ribonucleotide-diphosphate reductase subunit beta [Marinomonas sp.
           MWYL1]
 gi|150837932|gb|ABR71908.1| Ribonucleoside-diphosphate reductase [Marinomonas sp. MWYL1]
          Length = 377

 Score =  133 bits (335), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +     E Q + R +  EA   E
Sbjct: 226 MEGNAKIIKLIARDEALHLTGTQHMLNLMASGKDDPEMAVIAAECQDEVRQIFIEAAEQE 285

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLNA    QY+++I N R   +GLE  F    NP PW++  ++   
Sbjct: 286 KEWATYLFKDGSMIGLNAQILGQYVEYITNVRMQAVGLETCFATKHNPIPWINAWLVSDN 345

Query: 115 KEKNFFETRVTEY 127
            +    E  ++ Y
Sbjct: 346 VQVAPQEAEISSY 358


>gi|269102947|ref|ZP_06155644.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268162845|gb|EEZ41341.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 377

 Score =  133 bits (335), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    KE + +   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLLRNGHDDPEMAEIAKESEAECFDIFKRAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWM-SEVIDL 113
             +A      G  +GLN     QY+++I N R + +GLE  +   T+NP PW+ S +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNLRMNAVGLEHAYTGATQNPIPWINSWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|323945045|gb|EGB41110.1| nrdB protein [Escherichia coli H120]
          Length = 178

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 27  MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 86

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 87  KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 146

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 147 VQVAPQEVEVSSY 159


>gi|119360103|gb|ABL66780.1| At5g40942 [Arabidopsis thaliana]
          Length = 231

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 6/111 (5%)

Query: 28  QIKIENPH----LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 83
           QI IEN H    L TK  + + + ++ +A  +E  +  + +    VG+N     QY++F+
Sbjct: 103 QIAIENIHSEILLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQYIEFV 162

Query: 84  ANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGLK 134
           A+R    +G   ++  T NPF WM E+I L+ + NFFE RV EYQ+ + + 
Sbjct: 163 ADRLLAALGCGKVYGVT-NPFDWM-ELISLQGKTNFFEKRVGEYQKASVMS 211


>gi|194366071|ref|YP_002028681.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas
           maltophilia R551-3]
 gi|194348875|gb|ACF51998.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
          Length = 346

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  ENP L T E           A  LE  ++
Sbjct: 206 MNGTGKIISFINRDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWS 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L+   T+N  PW+    D   + + 
Sbjct: 266 SEVL-DGIDGIDVDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKT 324

Query: 118 NFFETRVTEYQQGAG 132
           +FFE R   Y++   
Sbjct: 325 DFFEMRNASYKKTNA 339


>gi|283832326|ref|ZP_06352067.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
 gi|291071973|gb|EFE10082.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
          Length = 376

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A L E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|242238482|ref|YP_002986663.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya dadantii
           Ech703]
 gi|242130539|gb|ACS84841.1| ribonucleotide reductase [Dickeya dadantii Ech703]
          Length = 376

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGQDDPEMAKVAEECQQQCYDLFVMAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|260772919|ref|ZP_05881835.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           metschnikovii CIP 69.14]
 gi|260612058|gb|EEX37261.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           metschnikovii CIP 69.14]
          Length = 377

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGLDDFTFLQIAEECKQQCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GLEP +   T NP PW++  +   
Sbjct: 285 KEWAAYLFKDGSMIGLNRDILCQYVEYITNIRMQAVGLEPAYPKATSNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|152971181|ref|YP_001336290.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206577425|ref|YP_002237361.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|262043285|ref|ZP_06016416.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288934289|ref|YP_003438348.1| ribonucleotide reductase [Klebsiella variicola At-22]
 gi|330000612|ref|ZP_08303755.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|150956030|gb|ABR78060.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206566483|gb|ACI08259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|259039384|gb|EEW40524.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288889018|gb|ADC57336.1| ribonucleotide reductase [Klebsiella variicola At-22]
 gi|328537954|gb|EGF64133.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 376

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGSDDPEMAEIAEECKQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|237732274|ref|ZP_04562755.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
 gi|226907813|gb|EEH93731.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
          Length = 376

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A L E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|283786035|ref|YP_003365900.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter
           rodentium ICC168]
 gi|282949489|emb|CBG89102.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter
           rodentium ICC168]
          Length = 376

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A L E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|209972895|ref|YP_002300342.1| gp4 [Bacillus phage SPO1]
 gi|209871215|gb|ACI90971.1| gp4 [Bacillus phage SPO1]
          Length = 346

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG +    YI RDE  H  F   V+  +  E P L T+E       M+ EA  LEI Y+
Sbjct: 206 MVGTSTMINYIQRDEVAHAYFFSQVLRYLMAERPELHTEENVNFIYDMMQEAADLEIEYS 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM---SEVIDLKKEK 117
            + +     GL+    E Y++ + NRR   +GL+ ++   EN  PWM    +  + + + 
Sbjct: 266 QKIL-HDIPGLDLEELEGYIKSLCNRRLRGVGLDDIYAGVENSMPWMIAFDDGSNNQTKS 324

Query: 118 NFFETRVTEYQQ 129
           + FE +   Y++
Sbjct: 325 DMFEQKSRNYKK 336


>gi|313607545|gb|EFR83848.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL F2-208]
          Length = 187

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 47  MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWS 106

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 107 EEVLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 165

Query: 118 NFFETRVTEYQQ 129
           +FFE R + Y++
Sbjct: 166 DFFEMRNSSYKK 177


>gi|83592781|ref|YP_426533.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
           rubrum ATCC 11170]
 gi|83575695|gb|ABC22246.1| Ribonucleoside-diphosphate reductase [Rhodospirillum rubrum ATCC
           11170]
          Length = 358

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + ++   E   L TK  +     +      LE  + 
Sbjct: 195 MKGMGQIVTWSVRDESLHCQGIIRLFHEWNRETGAL-TKPVRDDILDVATTMVGLEEKFV 253

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-----------TENPFPWMS 108
                 G   G+ A   + Y++++A+ R  Q+ L  L+ +             +P PW+ 
Sbjct: 254 DLAFELGAIEGMRAEDIKSYVRYVADWRLTQLKLPILYGHFRETEAGYEQLRPHPLPWLV 313

Query: 109 EVIDLKKEKNFFETRVTEYQQGAGL-KWD 136
           E+++  +  NFFE R TEY + A    WD
Sbjct: 314 EILNGVEHANFFEQRSTEYSKAATQGAWD 342


>gi|319790519|ref|YP_004152152.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
 gi|317115021|gb|ADU97511.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
          Length = 352

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 7/141 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+  +YI RDE  H+      +  +  E    +    + K   M   A   E  ++
Sbjct: 212 MQGTADIIRYINRDELTHVILFEHFMKDLTDEGFKKY--LTKDKIYDMFRIAVDQEQRFS 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK----E 116
            + +    +G+N  S E Y  +IAN+R   +GLEP+F    NP+  +  + D       +
Sbjct: 270 KKVIGNKILGMNEQSIEDYTFYIANKRLKALGLEPIFPDRGNPYEHLERIADTGGEANVK 329

Query: 117 KNFFETRVTEYQQGAGLK-WD 136
            NFFE  VT Y Q   ++ WD
Sbjct: 330 ANFFEATVTSYNQANAVEGWD 350


>gi|190574752|ref|YP_001972597.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas
           maltophilia K279a]
 gi|190012674|emb|CAQ46302.1| putative ribonucleoside-diphosphate reductase beta chain
           [Stenotrophomonas maltophilia K279a]
          Length = 346

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  ENP L T E           A  LE  ++
Sbjct: 206 MNGTGKIISFINRDELAHTKFISELIRAIIGENPELQTNELTAYVHQSFEHAIELETQWS 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L+   T+N  PW+    D   + + 
Sbjct: 266 SEVL-DGIDGIDVDEMVRYVKYRANKMAGMLGIERLYSDTTDNVMPWIKAYADNFTETKT 324

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 325 DFFEMRNASYKK 336


>gi|71276518|ref|ZP_00652793.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon]
 gi|71900741|ref|ZP_00682863.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|170729741|ref|YP_001775174.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa M12]
 gi|71162695|gb|EAO12422.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon]
 gi|71729511|gb|EAO31620.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|167964534|gb|ACA11544.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M12]
          Length = 349

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T             A  LE  + 
Sbjct: 209 MTGTGKIISFINRDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWT 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L+ + T+N  PW+    D   + + 
Sbjct: 269 GEVL-NGIDGIDVEEMIRYVKYRANKMAGMLGIETLYTETTDNVMPWIRAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 328 DFFEMRNASYKK 339


>gi|330829606|ref|YP_004392558.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
           protein [Aeromonas veronii B565]
 gi|328804742|gb|AEB49941.1| Ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Aeromonas veronii B565]
          Length = 393

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q    +  EA + E
Sbjct: 241 MEGNAKIIKMIARDEALHLTGTQHMLNLMRTGQDDPEMAEIAAECEQACFEIFKEAAIQE 300

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL+P F  T+ NP PW++  +   
Sbjct: 301 KEWAEYLFQDGSMIGLNKDILCQYVEYITNLRMSAVGLQPAFAGTKQNPIPWINTWLSSD 360

Query: 114 KKEKNFFETRVTEY 127
             +    E  V+ Y
Sbjct: 361 NVQVAPQEVEVSSY 374


>gi|93005945|ref|YP_580382.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           cryohalolentis K5]
 gi|92393623|gb|ABE74898.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter cryohalolentis K5]
          Length = 377

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++I  ++P +    KE  ++S  +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   F  ++ NP PW++  +   
Sbjct: 285 KEWAGYLFKDGSMIGLNKDILCQYIEYITNLRMEAVGLPVAFPNSKSNPIPWINTWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    ET ++ Y
Sbjct: 345 NVQVAPQETEISSY 358


>gi|148244629|ref|YP_001219323.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326456|dbj|BAF61599.1| ribonucleoside-diphosphate reductase beta subunit [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 378

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 6/137 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +    KE +++  TM  EA   E
Sbjct: 225 MEGNAKIIRMIARDEALHLTGTQHILNLMSDGKDDPDMKKIAKECEKEVITMFKEACEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL-K 114
             +A      G  +GLNA   +QY+++I N R   + L P+F    NP PW++  +D   
Sbjct: 285 KDWAEYLFRDGSMIGLNAKMLKQYLEYITNVRMKALNLSPVFDECINPLPWINHWLDSDN 344

Query: 115 KEKNFFETRVTEYQQGA 131
            +    ET +T Y   A
Sbjct: 345 VQVAPQETEITSYLVSA 361


>gi|71065825|ref|YP_264552.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           arcticus 273-4]
 gi|71038810|gb|AAZ19118.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter arcticus 273-4]
          Length = 377

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++I  ++P +    KE  ++S  +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLMRIGRDDPEMVDIAKECYEESIEIFRKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   F  ++ NP PW++  +   
Sbjct: 285 KEWAGYLFKDGSMIGLNKDILCQYIEYITNLRMEAVGLPVAFPKSKSNPIPWINTWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    ET ++ Y
Sbjct: 345 NVQVAPQETEISSY 358


>gi|296103863|ref|YP_003614009.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058322|gb|ADF63060.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 376

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|259907948|ref|YP_002648304.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia
           pyrifoliae Ep1/96]
 gi|224963570|emb|CAX55060.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           pyrifoliae Ep1/96]
 gi|283477829|emb|CAY73745.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           pyrifoliae DSM 12163]
 gi|310768143|gb|ADP13093.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia sp.
           Ejp617]
          Length = 376

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    KE +Q+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R + +GL+  FK   NP PW+ S ++   
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|284009345|emb|CBA76525.1| ribonucleoside-diphosphate reductase 1, beta subunit [Arsenophonus
           nasoniae]
          Length = 378

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    KE ++    +  +A   E
Sbjct: 227 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGQDDPEMAIIAKECEEACYRLFVQAAEQE 286

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 287 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDN 346

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 347 VQVAPQEVEVSSY 359


>gi|126654703|ref|ZP_01726237.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
 gi|126623438|gb|EAZ94142.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
          Length = 352

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I + +   PH       ++   M   A   E  + 
Sbjct: 212 MPGSADIFKMINRDELSHVRLYQKLIPEARKVFPH-----SVEQIYEMFDMAVNYECRWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-- 115
           +  +    +G+   S E+Y +++AN R   IGLEPL+    Y ++P+  +    D KK  
Sbjct: 267 NHIVGNNILGITESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEA 326

Query: 116 --EKNFFETRVTEYQQGAGLK-WD 136
             + NFFE  VT Y   +G+  WD
Sbjct: 327 HTKANFFEATVTSYVMSSGVTGWD 350


>gi|188533366|ref|YP_001907163.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia
           tasmaniensis Et1/99]
 gi|188028408|emb|CAO96269.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           tasmaniensis Et1/99]
          Length = 376

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    KE +Q+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R + +GL+  FK   NP PW+ S ++   
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMNAVGLDLPFKTRSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|183599610|ref|ZP_02961103.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
 gi|188021860|gb|EDU59900.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
          Length = 378

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E + +   +  +A   E
Sbjct: 227 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEDECYKLFVDAAEQE 286

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A     +G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 287 KEWAEYLFSEGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDN 346

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 347 VQVAPQEVEVSSY 359


>gi|15837799|ref|NP_298487.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa 9a5c]
 gi|28198393|ref|NP_778707.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa Temecula1]
 gi|9106169|gb|AAF84007.1|AE003954_4 ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa
           9a5c]
 gi|28056463|gb|AAO28356.1| ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa
           Temecula1]
          Length = 346

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T             A  LE  + 
Sbjct: 206 MTGTGKIISFINRDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWT 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G++ L+ + T+N  PW+    D   + + 
Sbjct: 266 GEVL-DGIDGIDVEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKT 324

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 325 DFFEMRNASYKK 336


>gi|149182583|ref|ZP_01861054.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
 gi|148849719|gb|EDL63898.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
          Length = 345

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 2/133 (1%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  +    YI RDE LH+     +  ++  ENP   T E +         A  LEI + 
Sbjct: 205 MVATSTMINYINRDEQLHVGLFEKIYKEVLHENPEYDTAELKVFGTQAFKRAAELEIEWG 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLK-KEKN 118
            + +     GL     E Y++F+AN+R  Q+G +  F+ Y  NP  W+    ++   + +
Sbjct: 265 EQIIGNKIDGLLMSDLEAYIKFMANKRAEQMGFQAPFEGYRTNPLRWIVAYQEVDLGKTD 324

Query: 119 FFETRVTEYQQGA 131
           FFE +  +Y + +
Sbjct: 325 FFEQKSRQYTKTS 337


>gi|61806369|ref|YP_214728.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
 gi|61563913|gb|AAX46968.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
          Length = 387

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES HL     ++ +    ++P +    KE +   + M       E 
Sbjct: 235 MEGSAKILSLISRDESQHLVITQQILKKWADGDDPEMQEIAKEEKSFVKDMFRNTVNEEK 294

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLK 114
           A+A     +G  +GLNA     Y+++IANRR   IGL+P++      NP PW    ++ K
Sbjct: 295 AWADYLFKEGSMIGLNARLLNNYVEWIANRRMKAIGLDPIYDQPLRNNPLPWTEHWLNSK 354

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G  +K D
Sbjct: 355 GQQNAPQETEIESYVIGG-IKQD 376


>gi|251790602|ref|YP_003005323.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya zeae
           Ech1591]
 gi|247539223|gb|ACT07844.1| ribonucleotide reductase [Dickeya zeae Ech1591]
          Length = 376

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRAGQDDPEMAQVAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|89092731|ref|ZP_01165684.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
           sp. MED92]
 gi|89083243|gb|EAR62462.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
           sp. MED92]
          Length = 376

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P      KE +Q    +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNIMASGADDPDYKDIAKECEQDVYNIFKEAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A     +G  +GLNA     Y+++I N R   + LE +F   +NP PWM+  ++   
Sbjct: 285 KDWAQYLFREGSMIGLNAQILSDYVEYITNVRMKALNLEEIFPARQNPLPWMNAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  ++ Y
Sbjct: 345 VQVAPQEAEISSY 357


>gi|119485472|ref|ZP_01619800.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
 gi|119457228|gb|EAW38354.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
          Length = 359

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I +     PH       ++   M   A   E  + 
Sbjct: 219 MPGSADIFKMINRDELSHVRLYQKLIPEAMQTFPH-----SVEQIYEMFDTAVQHECRWT 273

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK-- 115
           +  + +  +G+   S EQY +++AN R   IGL+PL+   +Y+++P+  +    D KK  
Sbjct: 274 NHIVGRNILGITETSTEQYTKYLANARLRSIGLKPLYTDPRYSKSPYTHLERFSDTKKEA 333

Query: 116 --EKNFFETRVTEYQQGAGL-KWD 136
             + NFFE  VT Y   +G+  WD
Sbjct: 334 HTKANFFEASVTSYVMSSGVGGWD 357


>gi|326782198|ref|YP_004322599.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
 gi|310004405|gb|ADO98798.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
          Length = 395

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW---TKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES HL     +I + +  +        +E +     M   A   E 
Sbjct: 243 MEGSAKIISLIARDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKSNVLKMFKNAVEEEK 302

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--NPFPWMSEVIDLK 114
           A+A      G  +GLN     QY++F ANRR   IGL+P++  +   NP PW    ++ K
Sbjct: 303 AWASYLFKNGSMIGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSK 362

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G  +K D
Sbjct: 363 GQQNAPQETEIESYVIGG-IKQD 384


>gi|89074073|ref|ZP_01160574.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           sp. SKA34]
 gi|89050211|gb|EAR55722.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           sp. SKA34]
          Length = 377

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q    +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLLRNGHDDPEMVEIATECEQDCFDLFKAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWM-SEVIDL 113
             +A      G  +GLN     QY+++I N R   +GL P ++  T+NP PW+ S +   
Sbjct: 285 KEWADYLFKDGSMIGLNKQILCQYVEYITNLRMVAVGLRPAYEGATQNPIPWINSWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|326783148|ref|YP_004323545.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
 gi|310005566|gb|ADO99954.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
          Length = 394

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW---TKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES HL     +I + +  +        +E +     M   A   E 
Sbjct: 242 MEGSAKIISLIARDESQHLVLTQQIIKKWQDGDDEEMVRIAEEEKPNVLKMFQNAVEEEK 301

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE--NPFPWMSEVIDLK 114
           A+A      G  +GLN     QY++F ANRR   IGL+P++  +   NP PW    ++ K
Sbjct: 302 AWAQYLFKNGSMIGLNEKLLGQYVEFTANRRMKAIGLDPIYDISPRNNPLPWTQYWLNSK 361

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G  +K D
Sbjct: 362 GQQNAPQETEIESYVIGG-IKQD 383


>gi|172036555|ref|YP_001803056.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
 gi|171698009|gb|ACB50990.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
          Length = 352

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I + +   PH       ++   M   A   E  + 
Sbjct: 212 MPGSADIFKMINRDELSHVRLYQKLIPEARKVFPH-----SVEQIYEMFDMAVNYECRWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-- 115
           +  +    +G+   S E+Y +++AN R   IGLEPL+    Y ++P+  +    D KK  
Sbjct: 267 NHIVGNNILGITESSTEKYTKYLANIRLRSIGLEPLYPEPKYNKSPYTHLERFSDTKKEA 326

Query: 116 --EKNFFETRVTEYQQGAGLK-WD 136
             + NFFE  VT Y   +G+  WD
Sbjct: 327 HTKANFFEATVTSYVMSSGVTGWD 350


>gi|253989035|ref|YP_003040391.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|211638141|emb|CAR66767.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
           reductase 1) (b2 protein) (r2 protein) [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253780485|emb|CAQ83647.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
           reductase 1) (b2 protein) (r2 protein) [Photorhabdus
           asymbiotica]
          Length = 376

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIANECEQQCYDLFVQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A     +G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFSEGSMIGLNRDILCQYVEYITNIRMQAVGLKLPFETRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|218442220|ref|YP_002380549.1| ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
 gi|218174948|gb|ACK73681.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
          Length = 355

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I +     PH       ++   M   A   E  + 
Sbjct: 215 MPGSADIFKMINRDELSHVRLYQRIIVEAMETFPH-----SVEQIYEMFDTAVQHECRWT 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-- 115
           +  +    +G+   S EQY +++AN R + IGL+PL++   Y ++P+  +    D KK  
Sbjct: 270 NHIVGDNILGITESSTEQYTKYLANHRLNTIGLKPLYEDEKYKKSPYSHLERFSDTKKDA 329

Query: 116 --EKNFFETRVTEYQQGAGLK-WD 136
             + NFFE  VT Y   +G+  WD
Sbjct: 330 HTKANFFEATVTSYVMSSGVTGWD 353


>gi|71901120|ref|ZP_00683227.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|182681036|ref|YP_001829196.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa M23]
 gi|71729125|gb|EAO31249.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|182631146|gb|ACB91922.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M23]
 gi|307579504|gb|ADN63473.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa subsp. fastidiosa GB514]
          Length = 349

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T             A  LE  + 
Sbjct: 209 MTGTGKIISFINRDELAHTKFISEVIRAIVGENPELQTDALTDYVHQAFAHAIELETQWT 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G++ L+ + T+N  PW+    D   + + 
Sbjct: 269 GEVL-DGIDGIDVEEMIRYVKYRANKMAGMLGIQTLYTETTDNVMPWIRAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 328 DFFEMRNASYKK 339


>gi|237678830|emb|CAQ57557.1| NrdB protein [Bradyrhizobium elkanii]
          Length = 360

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 14/149 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + ++   E     T+  +     +      LE  + 
Sbjct: 201 MNGMGQIVSWSVRDESLHCEGIIKLFHEWNRETG-AVTRSVRDDIVDVAKTMVKLEENFV 259

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMS 108
                 G   G+       Y++++A+ R  Q+ + P+F + E           +P PW+ 
Sbjct: 260 DLAFGLGKIEGMRPEQIHTYVRYVADWRLTQLRIAPVFGFFEAKEGGFTQLKAHPLPWLV 319

Query: 109 EVIDLKKEKNFFETRVTEYQQGAGL-KWD 136
           E+++  +  NFFE R TEY + A    WD
Sbjct: 320 EILNGVEHANFFEQRATEYSKAASRGSWD 348


>gi|146312444|ref|YP_001177518.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp.
           638]
 gi|145319320|gb|ABP61467.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Enterobacter sp. 638]
          Length = 376

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +   A L E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVLAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GLE  FK   NP PW++  ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYIEYITNIRMQAVGLELPFKTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|115691069|ref|XP_001203692.1| PREDICTED: similar to ribonuleotide reductase small subunit,
           partial [Strongylocentrotus purpuratus]
 gi|115735426|ref|XP_798682.2| PREDICTED: similar to ribonuleotide reductase small subunit,
           partial [Strongylocentrotus purpuratus]
          Length = 258

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 31/129 (24%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I RDE LH +F   + + +    P         + + ++ +A  LE  Y 
Sbjct: 153 LPGLTFSNELISRDEGLHCDFACLLFSHLNHPTP-------VSRIQEIIRDAVRLEEEYL 205

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E +P   +G+NA    QY+QF+A+R   ++                        + NFF
Sbjct: 206 SEALPVALIGMNARLMCQYIQFVADRLLMEL------------------------KSNFF 241

Query: 121 ETRVTEYQQ 129
           E RV EYQ+
Sbjct: 242 EKRVGEYQK 250


>gi|315644971|ref|ZP_07898099.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
 gi|315279682|gb|EFU42984.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
          Length = 343

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  ++   YI RDE+ H  F  +V  Q+  + P L ++E        +  A  LE  +A
Sbjct: 202 MMATSQMISYIQRDENQHCYFFAEVFKQLLKDFPELNSQENIDYLYRTIDRAVELETNWA 261

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVID---LKKE 116
           H T+     G++      Y+++IANRR   +GLE  ++  + N  PW+    D      +
Sbjct: 262 HYTLSN-VRGIDLNELGDYIKYIANRRITMMGLEKAYQGVDVNCMPWIKPFSDEALNATK 320

Query: 117 KNFFETRVTEYQQGA 131
            +FFE +   Y +  
Sbjct: 321 TDFFEAKSRNYGKVG 335


>gi|326784480|ref|YP_004325029.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
 gi|310004513|gb|ADO98905.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
          Length = 388

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 9/144 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+    I RDES HL     ++       ++P +    +E Q+    M       E
Sbjct: 235 MEGSAKILSLIARDESQHLVLTQQILKNWTEGKDDPEMKEIAEEEQETVEQMFKACVDEE 294

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDL 113
            A+A+    +G  +GLN      Y+++IANRR   IGL+P++      NP PW    ++ 
Sbjct: 295 KAWANYLFKEGSMIGLNERLLHNYVEWIANRRMKAIGLKPIYDQPLRNNPLPWTEHWLNS 354

Query: 114 KKEKNF-FETRVTEYQQGAGLKWD 136
           K ++N   ET +  Y  G  +K D
Sbjct: 355 KGQQNAPQETEIESYVVGG-IKQD 377


>gi|329298015|ref|ZP_08255351.1| ribonucleotide-diphosphate reductase subunit beta [Plautia stali
           symbiont]
          Length = 376

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E + +   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLMRTGEDDPEMKEIAAECRDECFDLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW+ S ++   
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|292488819|ref|YP_003531706.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia
           amylovora CFBP1430]
 gi|292899970|ref|YP_003539339.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia
           amylovora ATCC 49946]
 gi|291199818|emb|CBJ46941.1| ribonucleoside-diphosphate reductase 1 beta subunit [Erwinia
           amylovora ATCC 49946]
 gi|291554253|emb|CBA21550.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           amylovora CFBP1430]
 gi|312172977|emb|CBX81232.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           amylovora ATCC BAA-2158]
          Length = 376

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    KE +Q+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAKECRQECYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R + +GL+  FK   NP PW+ S ++   
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILWQYIEYITNIRMNAVGLDLPFKTRSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|313836278|gb|EFS73992.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA2]
 gi|314928743|gb|EFS92574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL044PA1]
 gi|314971220|gb|EFT15318.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA3]
 gi|328906508|gb|EGG26283.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium sp. P08]
          Length = 324

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 5/127 (3%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
                +++RDESLHL FG+++I  +  ENP + T EF  +   M+ +   +E  Y  + +
Sbjct: 197 GSLIDWVVRDESLHLKFGMNLILTVLEENPDIATDEFAVEIHDMILKGVEMEAQYNRDML 256

Query: 65  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRV 124
           P+G  G+NA     Y++++A+RR  ++GLEP + +  NP  WM+   D  +  NFFET  
Sbjct: 257 PRGIPGMNAD----YVKYLADRRLEELGLEPEY-HVANPAKWMATANDTLQLVNFFETTN 311

Query: 125 TEYQQGA 131
           T Y+  A
Sbjct: 312 TSYEVNA 318


>gi|269139684|ref|YP_003296385.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
 gi|267985345|gb|ACY85174.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
 gi|304559553|gb|ADM42217.1| Ribonucleotide reductase of class Ia, beta subunit [Edwardsiella
           tarda FL6-60]
          Length = 376

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E + +   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHILNLMRSGQDDPEMAEIAAECEDQCYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWAGYLFRDGSMIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|262402402|ref|ZP_06078963.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC586]
 gi|262351184|gb|EEZ00317.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC586]
          Length = 360

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++            +E +Q+S  +  EA   E
Sbjct: 208 MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GLEP +   T NP PW++  +   
Sbjct: 268 KEWAAYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWINAWLSSD 327

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 328 NVQVAPQEAEISSY 341


>gi|282600304|ref|ZP_05973774.2| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
 gi|282565783|gb|EFB71318.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
          Length = 380

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +++   +  +A   E
Sbjct: 229 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEEQCYQLFVDAAEQE 288

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A     +G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 289 KEWAEYLFSEGSMIGLNKEILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDN 348

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 349 VQVAPQEVEVSSY 361


>gi|331035505|gb|AEC53062.1| ribonucleotide reductase subunit B [Synechococcus phage S-CRM01]
          Length = 381

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKS---RTMLHEATLLEI 57
           M G A+    I RDE+ HL    ++IN  +  +     K + ++     ++   A   E 
Sbjct: 229 MEGSAKIISLIARDENQHLFLTQNIINNWRNNDDPEMKKIYNEEIDHTTSLFEAAVDQEK 288

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 114
           A+A      G  +GL+      Y+++IANRR   IG++P+++     NP PWM   +  K
Sbjct: 289 AWAQYLFKTGSMIGLSEKLLCNYVEWIANRRMKAIGIKPIYEIPANSNPLPWMDHWLKSK 348

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
             +N   ET +  Y  G  +  D
Sbjct: 349 GVQNAPQETEIESYIVGG-INQD 370


>gi|161582009|ref|NP_230900.2| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|255745652|ref|ZP_05419600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholera CIRS 101]
 gi|262159072|ref|ZP_06030184.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae INDRE 91/1]
 gi|262169430|ref|ZP_06037122.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC27]
 gi|262191406|ref|ZP_06049594.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae CT 5369-93]
 gi|255736727|gb|EET92124.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholera CIRS 101]
 gi|262022243|gb|EEY40952.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC27]
 gi|262029257|gb|EEY47909.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae INDRE 91/1]
 gi|262032695|gb|EEY51245.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae CT 5369-93]
 gi|327483944|gb|AEA78351.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio cholerae LMA3894-4]
          Length = 377

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++            +E +Q+S  +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GLEP +   T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|307129979|ref|YP_003881995.1| Ribonucleotide reductase of class Ia (aerobic), subunit beta
           [Dickeya dadantii 3937]
 gi|306527508|gb|ADM97438.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Dickeya dadantii 3937]
          Length = 376

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRAGQDDPEMAKIAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|262274472|ref|ZP_06052283.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Grimontia hollisae CIP 101886]
 gi|262221035|gb|EEY72349.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Grimontia hollisae CIP 101886]
          Length = 360

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    KE +Q    +   A   E
Sbjct: 208 MEGNAKIIKLIARDEALHLTSTQHMLNILRSGDDDPEMAEIAKECEQVCFDLFKNAAEQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL+P ++   +NP PW++  +   
Sbjct: 268 KEWAEYLFKDGSMIGLNKDILCQYVEYITNLRMAAVGLKPAYQGANQNPIPWINAWLSSD 327

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 328 NVQVAPQEAEISSY 341


>gi|261253084|ref|ZP_05945657.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           orientalis CIP 102891]
 gi|260936475|gb|EEX92464.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           orientalis CIP 102891]
          Length = 377

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|271499642|ref|YP_003332667.1| ribonucleotide reductase [Dickeya dadantii Ech586]
 gi|270343197|gb|ACZ75962.1| ribonucleotide reductase [Dickeya dadantii Ech586]
          Length = 376

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRAGQDDPEMAQIAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFETRTNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|229505158|ref|ZP_04394668.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae BX 330286]
 gi|229511170|ref|ZP_04400649.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae B33]
 gi|229515628|ref|ZP_04405087.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TMA 21]
 gi|229518289|ref|ZP_04407733.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC9]
 gi|229521368|ref|ZP_04410787.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TM 11079-80]
 gi|229525854|ref|ZP_04415259.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae bv. albensis VL426]
 gi|229529665|ref|ZP_04419055.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae 12129(1)]
 gi|229608178|ref|YP_002878826.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           MJ-1236]
 gi|229333439|gb|EEN98925.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae 12129(1)]
 gi|229339435|gb|EEO04452.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae bv. albensis VL426]
 gi|229341466|gb|EEO06469.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TM 11079-80]
 gi|229345004|gb|EEO09978.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC9]
 gi|229347397|gb|EEO12357.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TMA 21]
 gi|229351135|gb|EEO16076.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae B33]
 gi|229357381|gb|EEO22298.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae BX 330286]
 gi|229370833|gb|ACQ61256.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae MJ-1236]
          Length = 381

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++            +E +Q+S  +  EA   E
Sbjct: 229 MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQE 288

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GLEP +   T NP PW++  +   
Sbjct: 289 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLSSD 348

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 349 NVQVAPQEAEISSY 362


>gi|50120137|ref|YP_049304.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610663|emb|CAG74108.1| ribonucleoside-diphosphate reductase 1 beta chain [Pectobacterium
           atrosepticum SCRI1043]
          Length = 376

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGHDDPEMAQIAEECQQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQGVGLSLPFQTRTNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E  V+ Y   Q  + +  D
Sbjct: 345 VQVAPQEVEVSSYLVGQIDSEISDD 369


>gi|42543295|pdb|1PM2|A Chain A, Crystal Structure Of Manganese Substituted R2-D84e (D84e
           Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
           Reductase)
 gi|42543296|pdb|1PM2|B Chain B, Crystal Structure Of Manganese Substituted R2-D84e (D84e
           Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
           Reductase)
          Length = 339

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW++  +
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFNTRSNPIPWINTWL 339


>gi|113200701|ref|YP_717864.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
 gi|76574600|gb|ABA47165.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
          Length = 387

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDE+ HL    +++N+ +  ++P +    KE +     M       E 
Sbjct: 235 MEGSAKILSLIARDENQHLVITQNILNKWREGDDPEMAIIAKEEEVNVVDMFKRTVNEEK 294

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLK 114
            +A      G  +GLN      Y+++IANRR   IGL+P++      NP PW    ++ K
Sbjct: 295 RWADYLFKDGSMIGLNDRLLHNYVEWIANRRMKAIGLKPIYDIPAKNNPLPWTEHWLNSK 354

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G  +K D
Sbjct: 355 GQQNAPQETEIESYVVGG-IKQD 376


>gi|156933156|ref|YP_001437072.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156531410|gb|ABU76236.1| hypothetical protein ESA_00966 [Cronobacter sakazakii ATCC BAA-894]
          Length = 376

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLMRSGEDDPEMAAIAEECKQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  FK   NP PW++  ++   
Sbjct: 285 KEWAEYLFQGGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|145298925|ref|YP_001141766.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851697|gb|ABO90018.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 377

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +   + E +Q    +  EA + E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHMLNLMRTGQDDPEMAEISAECEQACFEIFKEAAIQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R + +GL+P F   + NP PW++  +   
Sbjct: 285 KEWAEYLFQDGSMIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWINTWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  V+ Y
Sbjct: 345 NVQVAPQEVEVSSY 358


>gi|121590730|ref|ZP_01678061.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           2740-80]
 gi|147674333|ref|YP_001216820.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           O395]
 gi|153212320|ref|ZP_01948108.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           1587]
 gi|153801907|ref|ZP_01956493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-3]
 gi|153823603|ref|ZP_01976270.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           B33]
 gi|153827294|ref|ZP_01979961.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-2]
 gi|153829732|ref|ZP_01982399.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           623-39]
 gi|227081427|ref|YP_002809978.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           M66-2]
 gi|254291706|ref|ZP_04962493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           AM-19226]
 gi|254848379|ref|ZP_05237729.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
 gi|297578847|ref|ZP_06940775.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
           RC385]
 gi|298498653|ref|ZP_07008460.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MAK 757]
 gi|9655738|gb|AAF94414.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|121547411|gb|EAX57522.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           2740-80]
 gi|124116698|gb|EAY35518.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           1587]
 gi|124122552|gb|EAY41295.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-3]
 gi|126518882|gb|EAZ76105.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           B33]
 gi|146316216|gb|ABQ20755.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O395]
 gi|148874766|gb|EDL72901.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           623-39]
 gi|149738785|gb|EDM53127.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-2]
 gi|150422390|gb|EDN14350.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           AM-19226]
 gi|227009315|gb|ACP05527.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           M66-2]
 gi|227013172|gb|ACP09382.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O395]
 gi|254844084|gb|EET22498.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
 gi|297536441|gb|EFH75274.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
           RC385]
 gi|297542986|gb|EFH79036.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MAK 757]
          Length = 389

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++            +E +Q+S  +  EA   E
Sbjct: 237 MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQE 296

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GLEP +   T NP PW++  +   
Sbjct: 297 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLSSD 356

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 357 NVQVAPQEAEISSY 370


>gi|260598671|ref|YP_003211242.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           turicensis z3032]
 gi|260217848|emb|CBA32365.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Cronobacter
           turicensis z3032]
          Length = 376

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLMRSGEDDPEMAIIAEECKQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  FK   NP PW++  ++   
Sbjct: 285 KEWAEYLFQGGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFKTRSNPIPWINTWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|330445621|ref|ZP_08309273.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489812|dbj|GAA03770.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 377

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHILNLLRTGQDDPEMAEIAVECEQECFDIFKSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWM-SEVIDL 113
             +A      G  +GLN     QY+++I N R   +GL P ++  T+NP PW+ S +   
Sbjct: 285 KDWADYLFKDGSMIGLNKQILCQYVEYITNLRMSAVGLRPAYEGATQNPIPWINSWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|71280050|ref|YP_269047.1| ribonucleotide-diphosphate reductase subunit beta [Colwellia
           psychrerythraea 34H]
 gi|71145790|gb|AAZ26263.1| ribonucleotide reductase, beta subunit [Colwellia psychrerythraea
           34H]
          Length = 376

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           + G A+  + I RDE+LHL     ++N  +   ++P +   ++E + +   +  +    E
Sbjct: 225 LEGNAKIIKLIARDEALHLTGTQHILNNWRSGKDDPEMKIISEELRDEGLQIFLDVVEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A      G  +GLNA    QY+++I+N+R   IG    F    NP PWM+  +    
Sbjct: 285 KEWAQYLFKDGSMIGLNADILNQYIEYISNQRLTAIGFGAPFDIKSNPLPWMNAYLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    ET ++ Y
Sbjct: 345 VQVAPQETEISSY 357


>gi|307151334|ref|YP_003886718.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
 gi|306981562|gb|ADN13443.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
          Length = 355

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I +     PH   K        M   A   E  + 
Sbjct: 215 MPGSADIFKMINRDELSHVRLYQKIIAEAMQTFPHSVDK-----VYEMFDTAVHHECRWT 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK-- 115
           +  +    +G+   S EQY +++AN R   IGL+PL+   KY ++P+  +    D KK  
Sbjct: 270 NHIVGDNILGITESSTEQYTKYLANIRLKAIGLKPLYADEKYQKSPYSHLERFSDTKKDA 329

Query: 116 --EKNFFETRVTEYQQGAGLK-WD 136
             + NFFE  VT Y   +G+  WD
Sbjct: 330 HTKANFFEATVTSYVMSSGVTGWD 353


>gi|326781924|ref|YP_004322326.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
 gi|310003114|gb|ADO97512.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
          Length = 397

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI-KIENPHLWT--KEFQQKSRTMLHEATLLEI 57
           M G A+    I RDE+ HL    +++N+  + ++P +    KE ++ +      A   E 
Sbjct: 245 MEGSAKIISLIARDENQHLAITQNILNKWAQGDDPEMKQIMKEEEEWTYKAFDNAVNEEK 304

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 114
            +A      G  +GLN    +QY++++ANRR   IGL+P +    + NP PW    I  K
Sbjct: 305 RWADYLFKDGSMIGLNDKLLQQYVEWVANRRLKAIGLKPQYDIAASANPLPWTQHWISSK 364

Query: 115 K-EKNFFETRVTEYQQGAGLKWD 136
             +    ET V  Y  G  +K D
Sbjct: 365 GLQVAPQETEVESYVVGG-IKQD 386


>gi|193062401|ref|ZP_03043496.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
 gi|192932067|gb|EDV84666.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
          Length = 393

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E + +   +  +A   E
Sbjct: 242 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKLECYDLFVQAAQQE 301

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 302 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 361

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 362 VQVAPQEVEVSSY 374


>gi|261211025|ref|ZP_05925315.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC341]
 gi|260840000|gb|EEX66600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC341]
          Length = 360

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++            +E +Q+S  +  EA   E
Sbjct: 208 MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GLEP +   T NP PW++  +   
Sbjct: 268 KEWAAYLFKDGSMIGLNRDILCQYVEYITNIRMQAVGLEPAYPTATTNPIPWINAWLSSD 327

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 328 NVQVAPQEAEISSY 341


>gi|323497713|ref|ZP_08102728.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
 gi|323317189|gb|EGA70185.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
          Length = 377

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLGAAYPEATSNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|161617990|ref|YP_001595470.1| ribonucleotide reductase beta subunit [Enterobacteria phage
           phiEcoM-GJ1]
 gi|150416409|gb|ABR68787.1| ribonucleotide reductase beta subunit [Enterobacteria phage
           phiEcoM-GJ1]
          Length = 372

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 5/117 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +     E +Q+ + +  +A   E
Sbjct: 221 MEGNAKIIRLIARDEALHLTGTQHMLNLLASGKDDPEMGEIAAECRQECQKLFEDAAQQE 280

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
             +A      G  +GLN      Y+++I N R   +GL+  FK   NP PW++  ++
Sbjct: 281 KDWADYLFKDGSMIGLNKQILCGYVEYITNIRMQAVGLDAPFKGATNPIPWINAWLN 337


>gi|257454213|ref|ZP_05619483.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter
           aerosaccus SK60]
 gi|257448386|gb|EEV23359.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter
           aerosaccus SK60]
          Length = 377

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 10/146 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN  Q   ++P +    ++ QQ++  +  +A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLNGTQHMINLMQWGKDDPDMVEIAQDCQQQAIEIFKDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDL 113
            A+A      G  +GLN     QY+++I N R   IGL P+F   + NP PW++  +   
Sbjct: 285 KAWAKYLFKNGSMIGLNENILVQYVEYITNLRMDAIGLPPIFAAIKNNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY---QQGAGLKWD 136
             +    E+ +T Y   Q  A L  D
Sbjct: 345 NVQVAPQESEITSYLVGQIDAELSDD 370


>gi|156564205|ref|YP_001429715.1| nrd beta subunit [Bacillus phage 0305phi8-36]
 gi|154622902|gb|ABS83782.1| nrd beta subunit [Bacillus phage 0305phi8-36]
          Length = 352

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 4/134 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  +    YI RDE  H  F   +I ++  ENP L T+E  Q     L EA   E  +A
Sbjct: 212 MMKSSTMISYIQRDEMQHAYFIGLLIRRLLTENPELNTQENAQYIVDSLKEAVATEKEWA 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK---EK 117
            E +     GL+    + Y++++AN+R  Q+G++ +++   NP PW+    D      + 
Sbjct: 272 GEIL-ADIEGLDLEEFDHYIEYLANKRVRQLGMDNIYEERGNPMPWIQVFSDEMMEHTKT 330

Query: 118 NFFETRVTEYQQGA 131
           + FE +  +Y    
Sbjct: 331 DQFENKSRDYSGAT 344


>gi|61806080|ref|YP_214440.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
 gi|61374589|gb|AAX44586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
 gi|265525292|gb|ACY76089.1| NrdB [Prochlorococcus phage P-SSM2]
          Length = 384

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWT--KEFQQKSRTMLHEATLLEI 57
           M G A+    I RDE+ HL    +++N  +  ++P +    KE +Q +  M  +    E 
Sbjct: 232 MEGSAKIISLIARDENQHLAITQNILNNWRKGDDPEMVEIMKEEEQWTYQMFEKCVNEEK 291

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT--ENPFPWMSEVIDLK 114
            +A      G  +GLN     QY++++ANRR   IG++P++      NP PW    I  K
Sbjct: 292 MWAEYLFKDGSMIGLNDKLLHQYVEWVANRRMRSIGMKPVYDIAAKNNPLPWTEHWISSK 351

Query: 115 K-EKNFFETRVTEYQQGAGLKWD 136
             +    ET V  Y  G  +K D
Sbjct: 352 GLQVAPQETEVESYIVGG-IKQD 373


>gi|120598753|ref|YP_963327.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           W3-18-1]
 gi|146293170|ref|YP_001183594.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           putrefaciens CN-32]
 gi|120558846|gb|ABM24773.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. W3-18-1]
 gi|145564860|gb|ABP75795.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella putrefaciens CN-32]
 gi|319426318|gb|ADV54392.1| ribonucleotide reductase [Shewanella putrefaciens 200]
          Length = 376

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++N ++   ++P +     + QQ++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILNIMQGGKDDPEMGEIAAQCQQEAYDLFLKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A      G  +GLN     QY++FI N+R   + L   +  + NP PWM   +    
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEFITNQRMKSVNLPQPYPESTNPLPWMKNWLESDA 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E  V+ Y   Q  + +  D
Sbjct: 345 VQVAPQEVEVSSYLVGQIDSAVDGD 369


>gi|27375117|ref|NP_766646.1| ribonucleotide-diphosphate reductase subunit beta [Bradyrhizobium
           japonicum USDA 110]
 gi|27348253|dbj|BAC45271.1| ribonucleoside-diphosphate reductase beta subunit [Bradyrhizobium
           japonicum USDA 110]
          Length = 360

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 14/149 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +   + +RDESLH    I + ++   E     T+  +     +      LE  + 
Sbjct: 201 MNGMGQIVSWSVRDESLHCEGIIKLFHEWHRETG-AVTRPVRDDIVDVAKTMVKLEENFV 259

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----------NPFPWMS 108
                 G   G+       Y++++A+ R  Q+ + P+F + E           +P PW+ 
Sbjct: 260 ELAFGLGKIEGMLPEHIHAYVRYVADWRLAQLRIAPVFGFFEAKEGGFTQLKAHPLPWLV 319

Query: 109 EVIDLKKEKNFFETRVTEYQQGAGL-KWD 136
           E+++  +  NFFE R TEY + A    WD
Sbjct: 320 EILNGVEHANFFEQRATEYSKAASRGSWD 348


>gi|327394563|dbj|BAK11985.1| ribonucleoside-diphosphate reductase 1 beta subunit NrdB [Pantoea
           ananatis AJ13355]
          Length = 376

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +++   +  +A L E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|241589542|ref|YP_002979567.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|240868254|gb|ACS65913.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
          Length = 328

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/90 (60%), Positives = 67/90 (74%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G AEQYQYI+RDESLH NFGID+INQIK+ENPHLWT EF+ +   +  +A  LE  YA
Sbjct: 222 MTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFKVEITELFKQAVDLEYRYA 281

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQ 90
            +TMP+G +GLNA   + Y++FI NRRC  
Sbjct: 282 EDTMPRGVLGLNASMFKGYLRFICNRRCRS 311


>gi|260778827|ref|ZP_05887719.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260604991|gb|EEX31286.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 377

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL+  + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|238761950|ref|ZP_04622923.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           kristensenii ATCC 33638]
 gi|238699678|gb|EEP92422.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           kristensenii ATCC 33638]
          Length = 400

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++   ++P +    +E QQ+   +   A   E
Sbjct: 249 MEGNAKIIKMIARDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQE 308

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW+ S ++   
Sbjct: 309 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWINSWLVSDN 368

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 369 VQVAPQEVEVSSY 381


>gi|326564074|gb|EGE14316.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 103P14B1]
 gi|326570555|gb|EGE20595.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC8]
 gi|326573198|gb|EGE23167.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis CO72]
          Length = 361

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 5/134 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL--WTKEFQQKSRTMLHEATLLEIA 58
           M G A+  + I RDE+LHLN    ++  +  E+      T+  + +   +   A   E A
Sbjct: 213 MEGNAKIIKLIARDEALHLNGTQHILTLLVKEHEDYQTITQTCKDEIYDIFESAYEQERA 272

Query: 59  YAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKE 116
           +       G  +GLN     QY+Q+I + R   IGLEP+F  T+NP PW+ + +     +
Sbjct: 273 WIDYLFKDGSMIGLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWINNWLSSDNVQ 331

Query: 117 KNFFETRVTEYQQG 130
               ET +T Y  G
Sbjct: 332 VAPQETEITSYVVG 345


>gi|326567429|gb|EGE17544.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC1]
          Length = 361

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 5/134 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL--WTKEFQQKSRTMLHEATLLEIA 58
           M G A+  + I RDE+LHLN    ++  +  E+      T+  + +   +   A   E A
Sbjct: 213 MEGNAKIIKLIARDEALHLNGTQHILTLLVKEHEDYQTITQTCKDEIYDIFESAYEQERA 272

Query: 59  YAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLKKE 116
           +       G  +GLN     QY+Q+I + R   IGLEP+F  T+NP PW+ + +     +
Sbjct: 273 WIDYLFKDGSMIGLNKEILTQYLQYITDIRMSAIGLEPVFN-TKNPIPWINNWLSSDNVQ 331

Query: 117 KNFFETRVTEYQQG 130
               ET +T Y  G
Sbjct: 332 VAPQETEITSYVVG 345


>gi|323494790|ref|ZP_08099889.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           brasiliensis LMG 20546]
 gi|323310983|gb|EGA64148.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           brasiliensis LMG 20546]
          Length = 377

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL+  + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLDAAYPEATSNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|326783480|ref|YP_004324017.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
 gi|310004983|gb|ADO99373.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
          Length = 388

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES HL    +++ +    ++P +    +E Q     M       E 
Sbjct: 236 MEGSAKILSLIARDESQHLVITQNILRKWSEGDDPEMKLIAQEEQSYVTEMFKRTVEEEK 295

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLK 114
           A+A+     G  +GLN      Y+++IANRR   +G++P++      NP PW    ++ K
Sbjct: 296 AWANYLFRDGSLIGLNDRLLYNYVEWIANRRMKAVGIKPIYDIPAKNNPLPWTEHWLNSK 355

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G  +K D
Sbjct: 356 GQQNAPQETEIESYVVGG-IKQD 377


>gi|291618170|ref|YP_003520912.1| NrdB [Pantoea ananatis LMG 20103]
 gi|291153200|gb|ADD77784.1| NrdB [Pantoea ananatis LMG 20103]
          Length = 387

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +++   +  +A L E
Sbjct: 236 MEGNAKIIKLIARDEALHLTGTQHMLNLLRTGEDDPEMKEIAAECREECFELFKKAALQE 295

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 296 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLDLPFETRSNPIPWINAWLVSDN 355

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 356 VQVAPQEVEVSSY 368


>gi|156975012|ref|YP_001445919.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio harveyi
           ATCC BAA-1116]
 gi|156526606|gb|ABU71692.1| hypothetical protein VIBHAR_02734 [Vibrio harveyi ATCC BAA-1116]
          Length = 377

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFLFMQIAEEEKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|3891582|pdb|1AV8|A Chain A, Ribonucleotide Reductase R2 Subunit From E. Coli
 gi|3891583|pdb|1AV8|B Chain B, Ribonucleotide Reductase R2 Subunit From E. Coli
          Length = 340

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  +
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 339


>gi|153835812|ref|ZP_01988479.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi
           HY01]
 gi|148867435|gb|EDL66832.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi
           HY01]
          Length = 377

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATSNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|56418235|gb|AAV91049.1| ribonucleotide reductase beta subunit [Grouper iridovirus]
          Length = 384

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDE++H+     +   +  E P L T++  +  +     A  LE A+ 
Sbjct: 242 MKGMGKVVEWSVRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFI 301

Query: 61  HETMP--KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKE 116
                      GL   S + Y+ ++ N R   +GL  L     +ENP PW+  +I+    
Sbjct: 302 DLAFSYCPALDGLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADL 361

Query: 117 KNFFETRVTEYQQGA 131
            NFFE  VTEY+ G 
Sbjct: 362 TNFFENHVTEYETGG 376


>gi|238920521|ref|YP_002934036.1| ribonucleotide-diphosphate reductase subunit beta [Edwardsiella
           ictaluri 93-146]
 gi|238870090|gb|ACR69801.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Edwardsiella ictaluri 93-146]
          Length = 376

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E   +   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHILNLMRAGQDDPEMAEIATECASQCYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWAGYLFRDGSMIGLNRDILCQYVEYITNIRMQAVGLPLPFETRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|56692684|ref|YP_164142.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
 gi|42517396|gb|AAS18062.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
          Length = 384

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDE++H+     +   +  E P L T++  +  +     A  LE A+ 
Sbjct: 242 MKGMGKVVEWSVRDENIHVEGVSRLFETLCAEYPWLMTEKLVRDCKKDAERAAELEFAFI 301

Query: 61  HETMP--KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLKKE 116
                      GL   S + Y+ ++ N R   +GL  L     +ENP PW+  +I+    
Sbjct: 302 DLAFSYCPALDGLTPSSVKNYVLYVINLRASHMGLPKLMASAPSENPLPWVKWLIEGADL 361

Query: 117 KNFFETRVTEYQQGA 131
            NFFE  VTEY+ G 
Sbjct: 362 TNFFENHVTEYETGG 376


>gi|1941986|pdb|1PFR|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|1941987|pdb|1PFR|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
          Length = 340

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  +
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 339


>gi|3891570|pdb|2AV8|A Chain A, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
           Coli
 gi|3891571|pdb|2AV8|B Chain B, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
           Coli
          Length = 340

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  +
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 339


>gi|312885176|ref|ZP_07744856.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309367189|gb|EFP94761.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 377

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQECFDLFKDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL+  + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLDAAYPEATSNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|117619492|ref|YP_856857.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117560899|gb|ABK37847.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 377

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q    +  EA + E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHMLNLMRSGQDDPEMAEIAAECEQACFELFKEAAIQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R + +GL+P F   + NP PW++  +   
Sbjct: 285 KEWAEYLFQDGSMIGLNKDILCQYVEYITNLRMNAVGLQPAFAGAKQNPIPWINTWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  V+ Y
Sbjct: 345 NVQVAPQEVEVSSY 358


>gi|148978906|ref|ZP_01815226.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
           bacterium SWAT-3]
 gi|145962104|gb|EDK27390.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
           bacterium SWAT-3]
          Length = 377

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFAFMQIAEECKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|149190928|ref|ZP_01869191.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
           AK1]
 gi|148835283|gb|EDL52257.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
           AK1]
          Length = 377

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q    +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFSFMQIAEECKQDCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I+N R   +GL+  + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYISNVRMQAVGLDAAYPEATSNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|109898789|ref|YP_662044.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas atlantica T6c]
 gi|109701070|gb|ABG40990.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Pseudoalteromonas atlantica T6c]
          Length = 376

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G ++  + I RDE+LHL     ++N      ++P +     E+++++  +  +A   E
Sbjct: 225 MEGNSKIIRLISRDENLHLTSTQHILNLWAKGKDDPEMAEIALEYKEEATNIFLDAVNQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
             +A      G  +GLN     QY++FIAN R   IGL+  F    NP PWM+  ++
Sbjct: 285 KEWAEYLFQNGSMIGLNKDILCQYVEFIANHRMSAIGLDQPFDIKNNPLPWMNNYLN 341


>gi|317492553|ref|ZP_07950980.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919303|gb|EFV40635.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 376

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +Q+   +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHILNLMRSGQDDPEMAEVAVECEQQCYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFQTRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|238797463|ref|ZP_04640962.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           mollaretii ATCC 43969]
 gi|238718734|gb|EEQ10551.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           mollaretii ATCC 43969]
          Length = 376

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHIINLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW+ S ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|262171721|ref|ZP_06039399.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|261892797|gb|EEY38783.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus MB-451]
          Length = 377

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+S  +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GLEP +     NP PW++  +   
Sbjct: 285 KEWASYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|83754022|pdb|2ALX|A Chain A, Ribonucleotide Reductase R2 From Escherichia Coli In Space
           Group P6(1)22
          Length = 340

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  +
Sbjct: 285 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWL 340


>gi|84386981|ref|ZP_00990005.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           splendidus 12B01]
 gi|86148466|ref|ZP_01066756.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|218709927|ref|YP_002417548.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           splendidus LGP32]
 gi|84378271|gb|EAP95130.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           splendidus 12B01]
 gi|85833763|gb|EAQ51931.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|218322946|emb|CAV19123.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           splendidus LGP32]
          Length = 377

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGQDDFEFMQIAEECKQECFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLGTAYPEATSNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|332174213|gb|AEE23467.1| Ribonucleoside-diphosphate reductase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 376

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 5/117 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G ++  + I RDE+LHL     ++N      ++P +     E++Q++  +  +A   E
Sbjct: 225 MEGNSKIIRLISRDENLHLTSTQHILNLWAKGKDDPEMAEIAIEYKQQATDIFLDAVNQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
             +A      G  +GLN     QY++FIAN R   IGL   F    NP PWM+  ++
Sbjct: 285 KEWAEYLFQNGSMIGLNKDILCQYVEFIANHRMSAIGLGQPFDIKNNPLPWMNNYLN 341


>gi|258624428|ref|ZP_05719375.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM603]
 gi|258583275|gb|EEW08077.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM603]
          Length = 381

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+S  +  +A   E
Sbjct: 229 MEGNAKIIKLIARDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQE 288

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GLEP +     NP PW++  +   
Sbjct: 289 KEWASYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLSSD 348

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 349 NVQVAPQEAEISSY 362


>gi|152979144|ref|YP_001344773.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           succinogenes 130Z]
 gi|150840867|gb|ABR74838.1| Ribonucleoside-diphosphate reductase [Actinobacillus succinogenes
           130Z]
          Length = 376

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
            A+A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KAWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFEARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|153819185|ref|ZP_01971852.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
           cholerae NCTC 8457]
 gi|126510271|gb|EAZ72865.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
           cholerae NCTC 8457]
          Length = 171

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++            +E +Q+S  +  EA   E
Sbjct: 19  MEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQE 78

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GLEP +   T NP PW++  +   
Sbjct: 79  KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINAWLSSD 138

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 139 NVQVAPQEAEISSY 152


>gi|27366311|ref|NP_761839.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           vulnificus CMCP6]
 gi|37679427|ref|NP_934036.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           vulnificus YJ016]
 gi|320156821|ref|YP_004189200.1| ribonucleotide reductase of class Ia (aerobic), subunit beta
           [Vibrio vulnificus MO6-24/O]
 gi|27362512|gb|AAO11366.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio vulnificus CMCP6]
 gi|37198171|dbj|BAC94007.1| ribonucleotide reductase, beta subunit [Vibrio vulnificus YJ016]
 gi|319932133|gb|ADV86997.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio vulnificus MO6-24/O]
          Length = 377

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q+   +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQQCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   +   T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLPVAYPNATSNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|301156451|emb|CBW15922.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Haemophilus parainfluenzae T3T1]
          Length = 376

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++  ++   
Sbjct: 285 KEWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|326782458|ref|YP_004322858.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
 gi|310003406|gb|ADO97803.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
          Length = 386

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTKEFQQK--SRTMLHEATLLEI 57
           M G A+    I RDES HL    +++   +  ++P +     +++     M  +    E 
Sbjct: 234 MEGSAKILSLIARDESQHLVITQNILKNWRDGDDPEMQQIALEEEENVIKMFAKTVDEEK 293

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 114
           A+A      G  +GLN     QY+++IANRR   IGL+P++      NP PW    ++ K
Sbjct: 294 AWAEYLFKDGSMIGLNDRLLSQYVEWIANRRMKAIGLKPMYNVPAKSNPLPWTEHWLNSK 353

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G  +K D
Sbjct: 354 GQQNAPQETEIESYVIGG-IKQD 375


>gi|262165506|ref|ZP_06033243.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus VM223]
 gi|262025222|gb|EEY43890.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus VM223]
          Length = 377

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+S  +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GLEP +     NP PW++  +   
Sbjct: 285 KEWASYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|91227184|ref|ZP_01261643.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 12G01]
 gi|262393879|ref|YP_003285733.1| ribonucleotide reductase of class Ia (aerobic) subunit beta [Vibrio
           sp. Ex25]
 gi|269967067|ref|ZP_06181135.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 40B]
 gi|91188712|gb|EAS75000.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 12G01]
 gi|262337473|gb|ACY51268.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. Ex25]
 gi|269828326|gb|EEZ82592.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 40B]
          Length = 377

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q    +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|16332312|ref|NP_443040.1| hypothetical protein slr0591 [Synechocystis sp. PCC 6803]
 gi|1653942|dbj|BAA18852.1| slr0591 [Synechocystis sp. PCC 6803]
          Length = 355

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I +      H        +   M  +A   E  + 
Sbjct: 215 MPGSADIFKMINRDELSHVRLYQKLIPEAMQVFTH-----STDQIYEMFDKAVEFECRWT 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK-- 115
           +  +    +G+   S EQY +++AN R   IGL+PL+   +Y ++P+  +    D KK  
Sbjct: 270 NHIVGNNILGITESSTEQYTKYLANSRLRAIGLDPLYTDARYGKSPYTHLERFSDTKKEA 329

Query: 116 --EKNFFETRVTEYQQGAGLK-WD 136
             + NFFE  VT Y   +G+  WD
Sbjct: 330 HTKANFFEATVTSYVMSSGVSGWD 353


>gi|28898709|ref|NP_798314.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153839553|ref|ZP_01992220.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ3810]
 gi|260363692|ref|ZP_05776476.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus K5030]
 gi|260879741|ref|ZP_05892096.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|260898785|ref|ZP_05907226.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|260901598|ref|ZP_05909993.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|28806927|dbj|BAC60198.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149746934|gb|EDM57922.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ3810]
 gi|308086689|gb|EFO36384.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|308093260|gb|EFO42955.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|308108691|gb|EFO46231.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|308113401|gb|EFO50941.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus K5030]
          Length = 377

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q    +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|258620211|ref|ZP_05715250.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM573]
 gi|258587569|gb|EEW12279.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM573]
          Length = 381

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+S  +  +A   E
Sbjct: 229 MEGNAKIIKLIARDEALHLTGTQHMINILRNGMDDFTFLQVAEECKQESFDLFKQAAEQE 288

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GLEP +     NP PW++  +   
Sbjct: 289 KEWASYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAAVNNPIPWINAWLSSD 348

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 349 NVQVAPQEAEISSY 362


>gi|170077010|ref|YP_001733648.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
           sp. PCC 7002]
 gi|169884679|gb|ACA98392.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
           sp. PCC 7002]
          Length = 352

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I +      H            M+  A   E  + 
Sbjct: 212 MPGSADIFKMINRDELSHVRLFQKLIPEAMATFDH-----SVDHIYEMVERAVQYECQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKK-- 115
           +  +    +G+   S E Y +++AN R   IGLEPL+K   Y ++P+  +    D KK  
Sbjct: 267 NHIVGNDILGITEQSTEIYTKYLANIRLQAIGLEPLYKGDQYKKSPYRHLERFSDTKKEG 326

Query: 116 --EKNFFETRVTEYQQGAGLK-WD 136
             + NFFE  VT Y   +G+  WD
Sbjct: 327 NTKANFFEAGVTSYVMSSGITGWD 350


>gi|149911236|ref|ZP_01899859.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
           PE36]
 gi|149805690|gb|EDM65689.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
           PE36]
          Length = 376

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +   + E  Q+++ +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHILNLMADGKDDPEMQEISIECFQETQKIFTDAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN      Y+++I N R   +GL   F+   NP PW++  +I   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSDYIEYITNTRMAAVGLPKAFEVKSNPLPWINAWLISDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E+ ++ Y
Sbjct: 345 VQVAPQESEISSY 357


>gi|300717619|ref|YP_003742422.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           billingiae Eb661]
 gi|299063455|emb|CAX60575.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           billingiae Eb661]
          Length = 376

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E +Q+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGEDDPEMAEIARESRQECYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R H +GL+  FK   NP PW+ S ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYIEYITNIRMHAVGLDLPFKTRSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|325578589|ref|ZP_08148689.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159825|gb|EGC71955.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 376

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++  ++   
Sbjct: 285 KEWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFGARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|15606660|ref|NP_214040.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
 gi|18202109|sp|O67475|RIR2_AQUAE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit;
           Contains: RecName: Full=Aae nrdB intein; AltName:
           Full=Aae RIR2 intein
 gi|2983879|gb|AAC07431.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
          Length = 696

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 2/122 (1%)

Query: 16  SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPS 75
           + H+    ++IN ++ ENP L+T E ++        A   EI +         +G+N   
Sbjct: 575 NCHVTLFRNIINTLRKENPELFTPEIEKWIVEYFKYAVNEEIKWGQYVTQNQILGINDVL 634

Query: 76  CEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGAGL 133
            E+Y++++ N R  QIG +P++ + TENP  W+ E   +   + +FF+ +   Y +   L
Sbjct: 635 IERYIKYLGNLRITQIGFDPIYPEVTENPLKWIDEFRKINNTKTDFFQAKPQTYSKANEL 694

Query: 134 KW 135
           KW
Sbjct: 695 KW 696


>gi|330433426|gb|AEC18485.1| ribonucleotide-diphosphate reductase subunit beta [Gallibacterium
           anatis UMN179]
          Length = 376

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E QQ++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECQQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A+     G  +GLN     QY+++I N R   +GL   F    NP PW++  ++   
Sbjct: 285 KEWANYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLPLPFTTRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|122921307|pdb|2O1Z|A Chain A, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
           (Pv086155)
 gi|122921308|pdb|2O1Z|B Chain B, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
           (Pv086155)
          Length = 311

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 8/106 (7%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+    + I RDE LH +F   + + ++ + P        +  + ++ EA  +E ++  E
Sbjct: 213 GLTFSNELISRDEGLHTDFNCLIYSLLENKLPE-------EVVQNIVKEAVEVERSFICE 265

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
           ++P   +G+N+    QY++F+A+R    +G   +F + +NPF WM 
Sbjct: 266 SLPCDLIGMNSRLMSQYIEFVADRLLECLGSPKIF-HAKNPFNWMD 310


>gi|308187586|ref|YP_003931717.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
           C9-1]
 gi|308058096|gb|ADO10268.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
           C9-1]
          Length = 376

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +++   +  +A L E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW+ S ++   
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|304398198|ref|ZP_07380072.1| ribonucleotide reductase [Pantoea sp. aB]
 gi|304354064|gb|EFM18437.1| ribonucleotide reductase [Pantoea sp. aB]
          Length = 376

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +++   +  +A L E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGEDDPEMKEIAAECREECFELFKKAALQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW+ S ++   
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYIEYITNIRMQAVGLDLPFQTRSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|78049716|ref|YP_365891.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78038146|emb|CAJ25891.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 347

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   E           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHTKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|328474726|gb|EGF45531.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           parahaemolyticus 10329]
          Length = 377

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q    +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFSFMQIAEEAKQDCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|257462865|ref|ZP_05627271.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           D12]
          Length = 348

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     +I +IK EN + +    +++ R M   A   EI + 
Sbjct: 208 MVGTSDVIRLINRDELSHVVLFQKIIREIKAENHNFF---EEEEIRAMFRTAVEQEILWT 264

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK---- 115
              +    +G+   + E Y +++AN R   IGL P+++  T+NP+  +    D +     
Sbjct: 265 EHIIGNRILGITTETTEAYTKWLANERLRTIGLAPMYEEFTKNPYKHLERFADTEGDGNV 324

Query: 116 EKNFFETRVTEYQQGAGLK-WD 136
           + NFFE  VT Y   + +  WD
Sbjct: 325 KSNFFEGTVTSYNMSSSIDGWD 346


>gi|332162349|ref|YP_004298926.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318606422|emb|CBY27920.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325666579|gb|ADZ43223.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330864218|emb|CBX74276.1| ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           enterocolitica W22703]
          Length = 376

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW+ S ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRTNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|260768282|ref|ZP_05877216.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           furnissii CIP 102972]
 gi|260616312|gb|EEX41497.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           furnissii CIP 102972]
 gi|315179989|gb|ADT86903.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio furnissii
           NCTC 11218]
          Length = 377

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN ++            +E +Q+   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMINLLRNGMDDFEFLQIAEECKQECFDLFKQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL+  +   T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLDAAYPSATTNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|113461104|ref|YP_719172.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           somnus 129PT]
 gi|170717681|ref|YP_001784756.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           somnus 2336]
 gi|112823147|gb|ABI25236.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Haemophilus somnus 129PT]
 gi|168825810|gb|ACA31181.1| Ribonucleoside-diphosphate reductase [Haemophilus somnus 2336]
          Length = 376

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYELFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|118602534|ref|YP_903749.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
 gi|118567473|gb|ABL02278.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Candidatus Ruthia magnifica str. Cm (Calyptogena
           magnifica)]
          Length = 378

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 6/137 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +      L     +KE Q +  TM  EA   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHMLNLMSSGKDDLDMQKISKECQDEVITMFREACEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL-K 114
             +A      G  +GLNA   +QY+++I N R   + L  +F    NP PW++  +D   
Sbjct: 285 KDWAEYLFRDGSMIGLNAQILKQYLEYITNVRMKALNLSLIFDECTNPLPWINHWLDSDN 344

Query: 115 KEKNFFETRVTEYQQGA 131
            +    ET +T Y   A
Sbjct: 345 VQVAPQETEITSYLVSA 361


>gi|294637129|ref|ZP_06715438.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
           tarda ATCC 23685]
 gi|291089663|gb|EFE22224.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
           tarda ATCC 23685]
          Length = 376

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E + +   +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHILNLMRSGQDDPEMAEIAAECETQCYDLFVQAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KDWASYLFRDGSMIGLNRDILCQYVEYITNIRMQAVGLSLPFETRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|237747538|ref|ZP_04578018.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter
           formigenes OXCC13]
 gi|229378900|gb|EEO28991.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter
           formigenes OXCC13]
          Length = 376

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +    KE +++S  +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNLMGSGEDDPDMAEIAKECREQSIDLFVRAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +G+   F+   NP PW++  ++   
Sbjct: 285 KEWADYLFRDGSMIGLNRDILCQYVEYITNTRMQAVGMPLPFEIRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|148825799|ref|YP_001290552.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittEE]
 gi|148715959|gb|ABQ98169.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittEE]
          Length = 376

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
            A+A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KAWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|145633337|ref|ZP_01789068.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae 3655]
 gi|144986183|gb|EDJ92773.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae 3655]
          Length = 376

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
            A+A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KAWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|317060491|ref|ZP_07924976.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D12]
 gi|313686167|gb|EFS23002.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D12]
          Length = 344

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MVG ++  + I RDE  H+     +I +IK EN + +    +++ R M   A   EI + 
Sbjct: 204 MVGTSDVIRLINRDELSHVVLFQKIIREIKAENHNFF---EEEEIRAMFRTAVEQEILWT 260

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKK---- 115
              +    +G+   + E Y +++AN R   IGL P+++  T+NP+  +    D +     
Sbjct: 261 EHIIGNRILGITTETTEAYTKWLANERLRTIGLAPMYEEFTKNPYKHLERFADTEGDGNV 320

Query: 116 EKNFFETRVTEYQQGAGLK-WD 136
           + NFFE  VT Y   + +  WD
Sbjct: 321 KSNFFEGTVTSYNMSSSIDGWD 342


>gi|123441721|ref|YP_001005705.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088682|emb|CAL11484.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 376

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW+ S ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|315126539|ref|YP_004068542.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas sp. SM9913]
 gi|315015053|gb|ADT68391.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas sp. SM9913]
          Length = 376

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL+    ++N ++   ++P +     + ++++  M  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCREEAIKMFVDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   IGL   F    NP PW+ S ++   
Sbjct: 285 KEWAEYLFKDGSMIGLNKHILCQYVEYITNARMTAIGLPAQFDNNSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  ++ Y
Sbjct: 345 VQVAPQEAEISSY 357


>gi|332035983|gb|EGI72462.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 376

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL+    ++N ++   ++P +     + + ++  M  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   IGL   F+   NP PW+ S ++   
Sbjct: 285 KEWAEYLFKDGSMIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  ++ Y
Sbjct: 345 VQVAPQEAEISSY 357


>gi|85711601|ref|ZP_01042658.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
           baltica OS145]
 gi|85694461|gb|EAQ32402.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
           baltica OS145]
          Length = 377

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE++HL     +IN  +   ++P +    +E   ++  +   A   E
Sbjct: 225 MEGNAKIIRLIARDENVHLTSTQHMINLWQDGEDDPEMAEIAEELADEAYEIFMTAVKQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVI-DL 113
             +AH     G  +GLN     QY+++IAN R   IG +  F +   NP PWM++ +   
Sbjct: 285 KQWAHYLFRDGSMIGLNESMLCQYVEYIANLRMQAIGYDAPFPEQRSNPLPWMNKYLVSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|159030376|emb|CAO91271.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 355

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I +     PH       ++   M   A   E  + 
Sbjct: 215 MSGSADVFKMINRDELSHVRLYQKLIPEAMAIFPH-----SVEQIYEMFDSAVKHECCWT 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK-- 115
           +  +    +G+   S EQY +++AN R   IGLEPL+   KY ++P+  +    D KK  
Sbjct: 270 NHIVGNDILGITEYSTEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEG 329

Query: 116 --EKNFFETRVTEYQQGAGLK-WD 136
             + NFFE  VT Y   +GL  WD
Sbjct: 330 HTKANFFEATVTSYVMSSGLTGWD 353


>gi|59711808|ref|YP_204584.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio fischeri
           ES114]
 gi|197336251|ref|YP_002156001.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri
           MJ11]
 gi|59479909|gb|AAW85696.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Vibrio fischeri ES114]
 gi|197317741|gb|ACH67188.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri
           MJ11]
          Length = 377

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDESLHL     ++N ++   ++P       E +Q+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDESLHLTSTQHMLNLLRTGQDDPEFVEIAAECEQECFDLFKAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWM-SEVIDL 113
             +A+     G  +GLN     QY+++I N R   +GL   ++  T+NP PW+ S +   
Sbjct: 285 KQWANYLFKDGSMIGLNKDILCQYVEYITNLRMKAVGLNSAYEGATQNPIPWINSWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    ET ++ Y
Sbjct: 345 NVQVAPQETEISSY 358


>gi|16273547|ref|NP_439802.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae Rd KW20]
 gi|68250262|ref|YP_249374.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 86-028NP]
 gi|145629252|ref|ZP_01785051.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.1-21]
 gi|145631490|ref|ZP_01787259.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|145639184|ref|ZP_01794791.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittII]
 gi|145641092|ref|ZP_01796673.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|260581255|ref|ZP_05849073.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae RdAW]
 gi|260582634|ref|ZP_05850423.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae NT127]
 gi|319776092|ref|YP_004138580.1| ribonucleoside-diphosphate reductase subunit beta [Haemophilus
           influenzae F3047]
 gi|319896901|ref|YP_004135096.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3031]
 gi|329123256|ref|ZP_08251824.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           aegyptius ATCC 11116]
 gi|1172943|sp|P43755|RIR2_HAEIN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1574510|gb|AAC23306.1| ribonucleoside diphosphate reductase, beta chain (nrdB)
           [Haemophilus influenzae Rd KW20]
 gi|68058461|gb|AAX88714.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae 86-028NP]
 gi|144978755|gb|EDJ88478.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.1-21]
 gi|144982920|gb|EDJ90433.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|145271746|gb|EDK11656.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittII]
 gi|145274253|gb|EDK14118.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.4-21]
 gi|260092082|gb|EEW76027.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae RdAW]
 gi|260094306|gb|EEW78205.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae NT127]
 gi|301170418|emb|CBW30024.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Haemophilus influenzae 10810]
 gi|309750762|gb|ADO80746.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus
           influenzae R2866]
 gi|309972945|gb|ADO96146.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus
           influenzae R2846]
 gi|317432405|emb|CBY80760.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3031]
 gi|317450683|emb|CBY86903.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3047]
 gi|327471465|gb|EGF16913.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           aegyptius ATCC 11116]
          Length = 376

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
            A+A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KAWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|85059563|ref|YP_455265.1| ribonucleotide-diphosphate reductase subunit beta [Sodalis
           glossinidius str. 'morsitans']
 gi|84780083|dbj|BAE74860.1| ribonucleoside-diphosphate reductase 1 beta subunit [Sodalis
           glossinidius str. 'morsitans']
          Length = 376

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+S  +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTSTQHMLNLMRSGEDDPEMAEIARECQQESYDLFLLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F    NP PW+ S ++   
Sbjct: 285 KEWASYLFRDGSMIGLNKDILCQYVEYITNIRMQSVGLDLPFATRSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|320538993|ref|ZP_08038668.1| putative ribonucleoside diphosphate reductase 1, beta subunit,
           ferritin-like protein [Serratia symbiotica str. Tucson]
 gi|320030926|gb|EFW12930.1| putative ribonucleoside diphosphate reductase 1, beta subunit,
           ferritin-like protein [Serratia symbiotica str. Tucson]
          Length = 376

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I+N R   +GLE  FK   NP PW++  ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYISNIRMQAVGLELPFKTRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|238751211|ref|ZP_04612705.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           rohdei ATCC 43380]
 gi|238710485|gb|EEQ02709.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           rohdei ATCC 43380]
          Length = 399

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 248 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQE 307

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   FK   NP PW+ S ++   
Sbjct: 308 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWINSWLVSDN 367

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 368 VQVAPQEVEVSSY 380


>gi|326782536|ref|YP_004323092.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
 gi|310002750|gb|ADO97149.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
          Length = 386

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES HL    +++ + K  ++P +    KE Q     M       E 
Sbjct: 234 MEGSAKILSLIARDESQHLVITQNILRKWKEGDDPEMAVIAKEEQPFVAEMFKRTVNEEK 293

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLK 114
            +A     +G  +GLN      Y+++IANRR   IGL+P+F      NP PW    ++ K
Sbjct: 294 MWADYLFKQGSMIGLNDRLLHNYVEWIANRRMKAIGLDPIFDVPAKNNPLPWTEHWLNSK 353

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G  +K D
Sbjct: 354 GQQNAPQETEIESYVVGG-IKQD 375


>gi|269963956|ref|ZP_06178265.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
           1DA3]
 gi|269831299|gb|EEZ85449.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
           1DA3]
          Length = 377

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q    +  EA   E
Sbjct: 225 MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++  +   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPMAYPEATSNPIPWINAWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 345 NVQVAPQEAEISSY 358


>gi|4389291|pdb|1BIQ|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
           E238a
          Length = 375

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RD +LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 343

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 344 VQVAPQEVEVSSY 356


>gi|119472403|ref|ZP_01614521.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales
           bacterium TW-7]
 gi|119444925|gb|EAW26223.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales
           bacterium TW-7]
          Length = 376

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL+    ++N ++   ++P +     + + ++  M  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVQAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   IGL   F+   NP PW+ S ++   
Sbjct: 285 KEWAEYLFKDGSMIGLNKHILCQYVEYITNARMTAIGLPAQFENNSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  ++ Y
Sbjct: 345 VQVAPQEAEISSY 357


>gi|76875271|emb|CAI86492.1| ribonucleoside-diphosphate reductase 1, beta subunit
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 359

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL+    ++N ++   ++P +     + + ++  M  +A   E
Sbjct: 208 MEGNAKIIKLIARDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   IG    FK   NP PW+ S ++   
Sbjct: 268 KEWAEYLFKDGSMIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWINSWLVSDN 327

Query: 115 KEKNFFETRVTEY 127
            +    E  ++ Y
Sbjct: 328 VQVAPQEAEISSY 340


>gi|238753722|ref|ZP_04615083.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           ruckeri ATCC 29473]
 gi|238707958|gb|EEQ00315.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           ruckeri ATCC 29473]
          Length = 376

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAVECQQQCYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   FK   NP PW++  ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGTPFKTRTNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|297582631|ref|YP_003698411.1| ribonucleoside-diphosphate reductase [Bacillus selenitireducens
           MLS10]
 gi|297141088|gb|ADH97845.1| Ribonucleoside-diphosphate reductase [Bacillus selenitireducens
           MLS10]
          Length = 347

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  +    YI RDE  H  F    +  +  ++P L T+E  Q     +  A  LE  +A
Sbjct: 207 MMKTSTMISYIQRDEMQHAYFMSQFVRILLTDHPELNTRENVQYVYDAMASAAGLEQEWA 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL---KKEK 117
              +     G++      Y++++ N+R  Q+GL  LF   +NP PW+    D    + + 
Sbjct: 267 AVIL-ADIDGIDLGEFNGYVEYLVNKRLRQLGLSNLFPERDNPMPWIHVFSDTMMNQTKS 325

Query: 118 NFFETRVTEYQQGAG 132
           +FFE +   Y +   
Sbjct: 326 DFFEQKSRSYTKVTS 340


>gi|4389292|pdb|1BIQ|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
           E238a
 gi|40889714|pdb|1RSV|A Chain A, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
           Ribonucleotide Reductase
 gi|40889715|pdb|1RSV|B Chain B, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
           Ribonucleotide Reductase
          Length = 375

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RD +LHL     ++N ++   ++P +    +E +Q+   +  +A   E
Sbjct: 224 MEGNAKIIRLIARDAALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 284 KDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDN 343

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 344 VQVAPQEVEVSSY 356


>gi|261493906|ref|ZP_05990416.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261495801|ref|ZP_05992236.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261308535|gb|EEY09803.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261310439|gb|EEY11632.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 376

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N      ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMTYGNDDPEMAEIARECRQEAYELFLSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
            A+A      G  +GLN     QY+++I N R   +GL   FK   NP PW++  ++   
Sbjct: 285 KAWAEYLFKDGSMIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|254493923|ref|ZP_05107094.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291]
 gi|260440303|ref|ZP_05794119.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae DGI2]
 gi|268594982|ref|ZP_06129149.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae 35/02]
 gi|268596639|ref|ZP_06130806.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae FA19]
 gi|268599210|ref|ZP_06133377.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11]
 gi|268601557|ref|ZP_06135724.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18]
 gi|268603896|ref|ZP_06138063.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1]
 gi|268682359|ref|ZP_06149221.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332]
 gi|268684517|ref|ZP_06151379.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268686827|ref|ZP_06153689.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291043595|ref|ZP_06569311.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae DGI2]
 gi|293398906|ref|ZP_06643071.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           gonorrhoeae F62]
 gi|59717937|gb|AAW89342.1| putative ribonucleoside diphosphate reductase I beta chain
           [Neisseria gonorrhoeae FA 1090]
 gi|226512963|gb|EEH62308.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291]
 gi|268548371|gb|EEZ43789.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae 35/02]
 gi|268550427|gb|EEZ45446.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae FA19]
 gi|268583341|gb|EEZ48017.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11]
 gi|268585688|gb|EEZ50364.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18]
 gi|268588027|gb|EEZ52703.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1]
 gi|268622643|gb|EEZ55043.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332]
 gi|268624801|gb|EEZ57201.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268627111|gb|EEZ59511.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291012058|gb|EFE04047.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae DGI2]
 gi|291610320|gb|EFF39430.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           gonorrhoeae F62]
          Length = 384

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|161572976|ref|YP_207754.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA 1090]
 gi|194098862|ref|YP_002001926.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae NCCP11945]
 gi|239999147|ref|ZP_04719071.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae 35/02]
 gi|240013945|ref|ZP_04720858.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae DGI18]
 gi|240016387|ref|ZP_04722927.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA6140]
 gi|240080506|ref|ZP_04725049.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA19]
 gi|240113126|ref|ZP_04727616.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae MS11]
 gi|240115882|ref|ZP_04729944.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID18]
 gi|240118180|ref|ZP_04732242.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID1]
 gi|240121514|ref|ZP_04734476.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID24-1]
 gi|240123728|ref|ZP_04736684.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID332]
 gi|240125919|ref|ZP_04738805.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae SK-92-679]
 gi|240128431|ref|ZP_04741092.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae SK-93-1035]
 gi|193934152|gb|ACF29976.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae NCCP11945]
          Length = 377

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|217973230|ref|YP_002357981.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS223]
 gi|304408853|ref|ZP_07390474.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183]
 gi|307302856|ref|ZP_07582611.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175]
 gi|217498365|gb|ACK46558.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS223]
 gi|304352674|gb|EFM17071.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183]
 gi|306913216|gb|EFN43638.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175]
 gi|315267707|gb|ADT94560.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS678]
          Length = 376

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +++ ++   ++P +     E QQ++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A      G  +GLN     QY++FI N+R   + L   +    NP PWM   +    
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWMKNWLESDA 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E  V+ Y   Q  + +  D
Sbjct: 345 VQVAPQEVEVSSYLVGQIDSAVDGD 369


>gi|254230294|ref|ZP_04923683.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp.
           Ex25]
 gi|151937191|gb|EDN56060.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio sp.
           Ex25]
          Length = 242

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +IN ++            +E +Q    +  EA   E
Sbjct: 90  MEGNAKIIKLIARDEALHLNGTQHMINLLRNGQDDFTFMQIAEEAKQDCFDLFKEAAEQE 149

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL   + + T NP PW++  +   
Sbjct: 150 KEWAEYLFKDGSMIGLNKDILSQYVEYITNIRMQAVGLPAAYPEATTNPIPWINAWLSSD 209

Query: 114 KKEKNFFETRVTEY 127
             +    E  ++ Y
Sbjct: 210 NVQVAPQEAEISSY 223


>gi|270262779|ref|ZP_06191050.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia
           odorifera 4Rx13]
 gi|270043463|gb|EFA16556.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia
           odorifera 4Rx13]
          Length = 359

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 208 MEGNAKIIKLIARDEALHLTGTQHILNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 268 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLGLPFETRSNPIPWINAWLVSDN 327

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 328 VQVAPQEVEVSSY 340


>gi|157371509|ref|YP_001479498.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           proteamaculans 568]
 gi|157323273|gb|ABV42370.1| Ribonucleoside-diphosphate reductase [Serratia proteamaculans 568]
          Length = 376

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW++  ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLGLPFATRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|51869996|ref|YP_073549.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
 gi|51858204|gb|AAU10888.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
          Length = 374

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 3/137 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDE++H+     +   I  E P + TK+F +   T+  E   LE A+ 
Sbjct: 239 MKGMGKVVEWSIRDENVHVEGLCKLFKTIVSEYPFILTKDFYKAVETLQQEVLKLETAFV 298

Query: 61  HETM-PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNF 119
                      L       Y+++I  RR  Q+GL       +NP  W+S +I  +   NF
Sbjct: 299 DLVFIEDKLKNLKRVDVINYVKYILQRRTVQLGLSNKTDL-QNPILWVSWLISGRDVTNF 357

Query: 120 FETRVTEYQQGAGLKWD 136
           FE RVTEY  G  L+ D
Sbjct: 358 FENRVTEYDVGG-LEGD 373


>gi|153000811|ref|YP_001366492.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS185]
 gi|160875520|ref|YP_001554836.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS195]
 gi|151365429|gb|ABS08429.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS185]
 gi|160861042|gb|ABX49576.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS195]
          Length = 386

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +++ ++   ++P +     E QQ++  +  +A   E
Sbjct: 235 MEGNAKIIRLIARDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQE 294

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A      G  +GLN     QY++FI N+R   + L   +    NP PWM   +    
Sbjct: 295 KEWAKYLFKDGSMIGLNEQILCQYVEFITNQRMKSVNLPQPYPEITNPLPWMKNWLESDA 354

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E  V+ Y   Q  + +  D
Sbjct: 355 VQVAPQEVEVSSYLVGQIDSAVDGD 379


>gi|113970253|ref|YP_734046.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           MR-4]
 gi|114047558|ref|YP_738108.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           MR-7]
 gi|113884937|gb|ABI38989.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. MR-4]
 gi|113889000|gb|ABI43051.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. MR-7]
          Length = 376

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDV--INQIKIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +  I Q   ++P +     E QQ++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILTIMQAGKDDPEMGEIAAECQQEAYNLFLKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A      G  +GLN     QY+++I N+R   + L   +    NP PWM   +    
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQSNPLPWMKNWLESDA 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E  V+ Y   Q  + +  D
Sbjct: 345 VQVAPQEVEVSSYLVGQIDSAVDSD 369


>gi|15602584|ref|NP_245656.1| ribonucleotide-diphosphate reductase subunit beta [Pasteurella
           multocida subsp. multocida str. Pm70]
 gi|12721013|gb|AAK02803.1| NrdB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 376

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|188578920|ref|YP_001915849.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188523372|gb|ACD61317.1| ribonucleoside-diphosphate reductase, beta subunit [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 347

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   E           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|21244791|ref|NP_644373.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|325927516|ref|ZP_08188754.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
           91-118]
 gi|21110489|gb|AAM38909.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|325542109|gb|EGD13613.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
           91-118]
          Length = 347

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   E           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|254361270|ref|ZP_04977413.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           PHL213]
 gi|153092766|gb|EDN73809.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           PHL213]
          Length = 376

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAYGNDDPEMAEIARECRQEAYELFLSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
            A+A      G  +GLN     QY+++I N R   +GL   FK   NP PW++  ++   
Sbjct: 285 KAWAEYLFKDGSMIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|58580098|ref|YP_199114.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|84622097|ref|YP_449469.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae MAFF 311018]
 gi|58424692|gb|AAW73729.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
           pv. oryzae KACC10331]
 gi|84366037|dbj|BAE67195.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
           pv. oryzae MAFF 311018]
          Length = 347

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   E           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|229916488|ref|YP_002885134.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
           sp. AT1b]
 gi|229467917|gb|ACQ69689.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sp. AT1b]
          Length = 346

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 6/134 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW-TKEFQQKSRTMLHEATLLEIAY 59
           MVG +    YI RDE  H  F   ++  +  ENP +    +F Q     + EA  LEI +
Sbjct: 204 MVGTSTMISYIQRDEMQHSYFISQLLRAVLTENPKIDENGQFSQFVYDTMAEAVDLEIEW 263

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID---LKK 115
               + +   GL+      Y++++AN+R   IGL  L++   E+  PW+    D      
Sbjct: 264 CEYVL-RDLDGLDVSEMRDYVKYLANKRLRVIGLNDLYEGFDEDVMPWIRAYSDDSLNAT 322

Query: 116 EKNFFETRVTEYQQ 129
           + +FFE +   Y +
Sbjct: 323 KSDFFEQKSRSYAK 336


>gi|238785708|ref|ZP_04629683.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           bercovieri ATCC 43970]
 gi|238713393|gb|EEQ05430.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           bercovieri ATCC 43970]
          Length = 376

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E Q +   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQSQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW+ S ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGVPFNTRSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|170726650|ref|YP_001760676.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           woodyi ATCC 51908]
 gi|169811997|gb|ACA86581.1| Ribonucleoside-diphosphate reductase [Shewanella woodyi ATCC 51908]
          Length = 376

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +I  ++   ++P +    KE +Q++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHIIKLMQAGKDDPEMGEIAKECEQQAYDIFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N R   + L+  +    NP PWM   +
Sbjct: 285 KEWARYLFKDGSMIGLNEQILCQYVEYITNERMKSVNLDLPYAQITNPLPWMKTWL 340


>gi|293392273|ref|ZP_06636607.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952807|gb|EFE02926.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 376

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAKIAEECKQEAYDLFLAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KDWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|21959884|gb|AAM86526.1|AE013899_3 ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Yersinia
           pestis KIM 10]
 gi|45435621|gb|AAS61179.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 391

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 240 MEGNAKIIKMIARDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQE 299

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW+ S ++   
Sbjct: 300 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWINSWLVSDN 359

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 360 VQVAPQEVEVSSY 372


>gi|162139926|ref|YP_339935.2| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 376

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL+    ++N ++   ++P +     + + ++  M  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLSGTQHILNIMQDGKDDPEMAIVAAQCRDEAIKMFVDAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   IG    FK   NP PW+ S ++   
Sbjct: 285 KEWAEYLFKDGSMIGLNKHILCQYVEYITNARMTAIGFPAQFKNNSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  ++ Y
Sbjct: 345 VQVAPQEAEISSY 357


>gi|56460472|ref|YP_155753.1| ribonucleotide-diphosphate reductase subunit beta [Idiomarina
           loihiensis L2TR]
 gi|56179482|gb|AAV82204.1| Ribonucleotide reductase, beta subunit [Idiomarina loihiensis L2TR]
          Length = 377

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE++HL     ++N  Q   ++P +    +E +  +  +   A   E
Sbjct: 225 MEGNAKIIKLIARDENVHLTSTQHILNLWQYGEDDPEMKEIAEELRDDAYEIFMTAVKQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVI-DL 113
             +AH     G  +GLN     QY+++IAN R   IG +  F+    NP PWM++ +   
Sbjct: 285 KQWAHYLFKDGSMIGLNESMLCQYVEYIANLRMQAIGFDAPFENQRSNPLPWMNKYLVSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    E+ +T Y
Sbjct: 345 NVQVAPQESEITSY 358


>gi|88859281|ref|ZP_01133921.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
 gi|88818298|gb|EAR28113.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
          Length = 376

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL+    ++N ++   ++P +     + +++S  M   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLSGTQHMLNIMQDGQDDPEMAIVAAQLREESIEMFRTAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F  T NP PW+ S ++   
Sbjct: 285 KEWAEYLFKDGSMIGLNKDILCQYVEYITNVRMSAVGLPQQFSITSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  ++ Y
Sbjct: 345 VQVAPQEAEISSY 357


>gi|238788616|ref|ZP_04632408.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           frederiksenii ATCC 33641]
 gi|238723211|gb|EEQ14859.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           frederiksenii ATCC 33641]
          Length = 383

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 232 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAEECQQQCYDLFVLAAQQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW+ S ++   
Sbjct: 292 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGIPFNTRTNPIPWINSWLVSDN 351

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 352 VQVAPQEVEVSSY 364


>gi|51595597|ref|YP_069788.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 32953]
 gi|108806924|ref|YP_650840.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Antiqua]
 gi|108812924|ref|YP_648691.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Nepal516]
 gi|145599749|ref|YP_001163825.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|149366796|ref|ZP_01888830.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CA88-4125]
 gi|153950490|ref|YP_001401734.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 31758]
 gi|161484771|ref|NP_670275.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           KIM 10]
 gi|161511422|ref|NP_992302.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|162418296|ref|YP_001605847.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|165924721|ref|ZP_02220553.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938305|ref|ZP_02226863.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166009974|ref|ZP_02230872.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211802|ref|ZP_02237837.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167400353|ref|ZP_02305866.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419574|ref|ZP_02311327.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424117|ref|ZP_02315870.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470792|ref|ZP_02335496.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           FV-1]
 gi|170025073|ref|YP_001721578.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis YPIII]
 gi|186894660|ref|YP_001871772.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis PB1/+]
 gi|218928372|ref|YP_002346247.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           CO92]
 gi|229841157|ref|ZP_04461316.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229843262|ref|ZP_04463408.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229894122|ref|ZP_04509308.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Pestoides A]
 gi|229903354|ref|ZP_04518467.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Nepal516]
 gi|270487164|ref|ZP_06204238.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294503227|ref|YP_003567289.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|51588879|emb|CAH20493.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia
           pseudotuberculosis IP 32953]
 gi|108776572|gb|ABG19091.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Nepal516]
 gi|108778837|gb|ABG12895.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Antiqua]
 gi|115346983|emb|CAL19874.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CO92]
 gi|145211445|gb|ABP40852.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Pestoides F]
 gi|149291170|gb|EDM41245.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CA88-4125]
 gi|152961985|gb|ABS49446.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351111|gb|ABX85059.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|165913683|gb|EDR32302.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923781|gb|EDR40913.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165991370|gb|EDR43671.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207573|gb|EDR52053.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962315|gb|EDR58336.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050302|gb|EDR61710.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056966|gb|EDR66729.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751607|gb|ACA69125.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis
           YPIII]
 gi|186697686|gb|ACC88315.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+]
 gi|229679124|gb|EEO75227.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Nepal516]
 gi|229689609|gb|EEO81670.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229697523|gb|EEO87570.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229704007|gb|EEO91020.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Pestoides A]
 gi|262361266|gb|ACY57987.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D106004]
 gi|262365197|gb|ACY61754.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D182038]
 gi|270335668|gb|EFA46445.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294353686|gb|ADE64027.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|320015945|gb|ADV99516.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 376

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRLGEDDPEMAEIAEECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW+ S ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGIPFSTRTNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|163748931|ref|ZP_02156182.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
           benthica KT99]
 gi|161331307|gb|EDQ02195.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
           benthica KT99]
          Length = 376

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++  ++   ++P +    +E +Q +  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILKIMRAGVDDPEMGEIAEECEQLAYDIFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N R   + L P +    NP PWM   +
Sbjct: 285 KEWAQYLFKDGSMIGLNEAILCQYVEYITNERMKSVNLTPHYDEITNPLPWMKNWL 340


>gi|261867684|ref|YP_003255606.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413016|gb|ACX82387.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 376

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KDWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|114563305|ref|YP_750818.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           frigidimarina NCIMB 400]
 gi|114334598|gb|ABI71980.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella frigidimarina NCIMB 400]
          Length = 376

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++  ++   ++P +     E +Q++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILALMQGGKDDPEMGEIAAECKQEAYDLFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY++FI N+R   + L   +    NP PWM   +
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEFITNQRMKSVHLPQPYDEQSNPLPWMKNWL 340


>gi|309379219|emb|CBX22176.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 384

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E Q++   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|293395206|ref|ZP_06639492.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582]
 gi|291422383|gb|EFE95626.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582]
          Length = 376

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGADDPEMAEIAVECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   FK   NP PW++  ++   
Sbjct: 285 KEWAEYLFSGGSMIGLNKDILCQYVEYITNIRMQAVGLGAPFKTRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|166367085|ref|YP_001659358.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
           aeruginosa NIES-843]
 gi|166089458|dbj|BAG04166.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
           aeruginosa NIES-843]
          Length = 283

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 13/144 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G A+ ++ I RDE  H+     +I +      H       ++   M   A   E  + 
Sbjct: 143 MSGSADVFKMINRDELSHVRLYQKLIPEAMATFSH-----SVEQIYEMFDTAVKHECRWT 197

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK-- 115
           +  +    +G+   S EQY +++AN R   IGLEPL+   KY ++P+  +    D KK  
Sbjct: 198 NHIVGNDILGITEYSTEQYTKYLANIRLKAIGLEPLYREEKYNKSPYNHLERFSDTKKEG 257

Query: 116 --EKNFFETRVTEYQQGAGLK-WD 136
             + NFFE  VT Y   +GL  WD
Sbjct: 258 HTKANFFEATVTSYVMSSGLTGWD 281


>gi|172058301|ref|YP_001814761.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
           sibiricum 255-15]
 gi|171990822|gb|ACB61744.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sibiricum
           255-15]
          Length = 347

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 6/134 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAY 59
           MVG +    YI RDE  H  F   ++  +  E+P +     F +        A  LEI +
Sbjct: 205 MVGTSTMISYIQRDELQHSYFISQLLRAVLTEHPDIDADGSFTKFVYATFERAVDLEIEW 264

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVIDLKK--- 115
           +   + +   GL+      Y++++AN+R   IGL+ L++ + E+  PW+    D      
Sbjct: 265 SEYVL-RDLDGLDVSEMRDYVKYLANKRLRVIGLDDLYEGHDEDVMPWIRAYSDDSMNAT 323

Query: 116 EKNFFETRVTEYQQ 129
           + +FFE +   Y +
Sbjct: 324 KSDFFEQKSRSYAK 337


>gi|307171465|gb|EFN63309.1| Ribonucleoside-diphosphate reductase subunit M2 [Camponotus
           floridanus]
          Length = 343

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 7/96 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         H+  K   ++ ++++ +A  +E  + 
Sbjct: 231 MPGLTFSNELISRDEGLHCDFACLMFK-------HIVQKPSFERVKSIIMDAVEIEQEFL 283

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPL 96
            + +P   +G+N      Y++F+A+R    +G E +
Sbjct: 284 TQALPVQLIGMNCTLMCSYIEFVADRLFVALGFEKV 319


>gi|260913913|ref|ZP_05920387.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC
           43325]
 gi|260632000|gb|EEX50177.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC
           43325]
          Length = 376

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMASGQDDPEMAEIVEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KEWASYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|166710317|ref|ZP_02241524.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzicola BLS256]
          Length = 347

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   E           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAINLETQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|228861279|ref|YP_002854302.1| ribonucleotide reductase small subunit [Soft-shelled turtle
           iridovirus]
 gi|45550045|gb|AAS67856.1| ribonucleotide reductase small subunit [Rana grylio virus 9506]
 gi|194307559|gb|ACF42289.1| ribonucleotide reductase small subunit [Soft-shelled turtle
           iridovirus]
          Length = 387

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDE++H+     +   +  E P + TK+  +  +        LE A+ 
Sbjct: 241 MKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFV 300

Query: 61  HETMPK--GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKE 116
                +     GL     + Y+ ++ N R   +GL  L +      P PW+  +ID    
Sbjct: 301 DLAFQECGPVCGLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADL 360

Query: 117 KNFFETRVTEYQQGA 131
            NFFE  VTEY+ G 
Sbjct: 361 TNFFENHVTEYETGG 375


>gi|212635281|ref|YP_002311806.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           piezotolerans WP3]
 gi|212556765|gb|ACJ29219.1| Ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           piezotolerans WP3]
          Length = 376

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDV--INQIKIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +  I     ++P +    KE +Q +  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N R   + LE  +    NP PWM   +
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEYITNERMKAVNLESPYAEQSNPLPWMKNWL 340


>gi|119774862|ref|YP_927602.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           amazonensis SB2B]
 gi|119767362|gb|ABL99932.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella amazonensis SB2B]
          Length = 391

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++N ++   ++  +     E QQ++  +   A   E
Sbjct: 240 MEGNAKIIRLIARDEALHLNSTQHILNIMQGGKDDAEMAEIAIECQQEAYDLFLRAAEQE 299

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N+R   + L   +  + NP PWM   +
Sbjct: 300 KEWAKYLFKDGSMIGLNEQILCQYVEYITNQRMKSVNLPLPYPESTNPLPWMKNWL 355


>gi|261400675|ref|ZP_05986800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           lactamica ATCC 23970]
 gi|269209585|gb|EEZ76040.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           lactamica ATCC 23970]
          Length = 377

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|49237365|ref|YP_031646.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Frog virus 3]
 gi|47060183|gb|AAT09727.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Frog virus 3]
          Length = 387

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDE++H+     +   +  E P + TK+  +  +        LE A+ 
Sbjct: 241 MKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDLIELFKEDAERVAELEEAFV 300

Query: 61  HETMPK--GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKE 116
                +     GL     + Y+ ++ N R   +GL  L +      P PW+  +ID    
Sbjct: 301 DLAFQECGPVCGLEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADL 360

Query: 117 KNFFETRVTEYQQGA 131
            NFFE  VTEY+ G 
Sbjct: 361 TNFFENHVTEYETGG 375


>gi|308049658|ref|YP_003913224.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Ferrimonas balearica DSM 9799]
 gi|307631848|gb|ADN76150.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Ferrimonas balearica DSM 9799]
          Length = 378

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +IN +    ++P +     E   +S  +   A   E
Sbjct: 227 MEGNAKIIRFIARDEQLHLVGTQHMINLMADGRDDPEMAEIAIECHSESIEIFRRAAEQE 286

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
            A+A      G  +GLN    E Y++FI N R   IGL PLF    NP PWMS  +
Sbjct: 287 KAWASYLFKDGSMLGLNKQIIEDYVEFITNERMAGIGLPPLFDKRSNPLPWMSTWL 342


>gi|251792451|ref|YP_003007177.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter
           aphrophilus NJ8700]
 gi|315634378|ref|ZP_07889665.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter
           segnis ATCC 33393]
 gi|247533844|gb|ACS97090.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           aphrophilus NJ8700]
 gi|315476968|gb|EFU67713.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter
           segnis ATCC 33393]
          Length = 376

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KDWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|326782933|ref|YP_004323331.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
 gi|310004192|gb|ADO98586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
          Length = 388

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVI-NQIKIENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES HL    +++ N  K ++  +    KE +     M       E 
Sbjct: 236 MEGSAKILSLIARDESQHLVITQNILKNWAKGDDSEMAEIAKEEKPFVVDMFKRTVEEEK 295

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLK 114
            +A+    +G  +GLN      Y+++IANRR   IGL+P+F      NP PW    ++ K
Sbjct: 296 TWANYLFREGSMIGLNDRLLHNYVEWIANRRMKAIGLDPVFDQVARNNPLPWTQHWLNSK 355

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G  +K D
Sbjct: 356 GQQNAPQETEIESYVVGG-IKQD 377


>gi|145634465|ref|ZP_01790175.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae PittAA]
 gi|229845068|ref|ZP_04465204.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 6P18H1]
 gi|229846892|ref|ZP_04466999.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 7P49H1]
 gi|145268445|gb|EDK08439.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae PittAA]
 gi|229810381|gb|EEP46100.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 7P49H1]
 gi|229812040|gb|EEP47733.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 6P18H1]
          Length = 376

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +      L      +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDLEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
            A+A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  ++   
Sbjct: 285 KAWADYLFKDGSMIGLNRDILVQYVEYITNIRMQAVGLPLPFQTRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|209695249|ref|YP_002263178.1| ribonucleotide-diphosphate reductase subunit beta [Aliivibrio
           salmonicida LFI1238]
 gi|208009201|emb|CAQ79455.1| ribonucleoside-diphosphate reductase 1 beta chain [Aliivibrio
           salmonicida LFI1238]
          Length = 377

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P       E +Q    +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMVNLLRTGQDDPEFVEIAAECEQDCFDLFKAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWM-SEVIDL 113
             +A+     G  +GLN     QY+++I N R   +GL   +   T+NP PW+ S +   
Sbjct: 285 KEWANYLFKDGSMIGLNKDILCQYVEYITNLRMKAVGLSGAYDGATQNPIPWINSWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    ET ++ Y
Sbjct: 345 NVQVAPQETEISSY 358


>gi|157375444|ref|YP_001474044.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           sediminis HAW-EB3]
 gi|157317818|gb|ABV36916.1| Ribonucleoside-diphosphate reductase [Shewanella sediminis HAW-EB3]
          Length = 376

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHLWT--KEFQQKSRTMLHEATLLE 56
           + G A+  + I RDE+LHL+    ++       ++P +    +E ++  R +  +    E
Sbjct: 225 LEGNAKIIKLIARDEALHLSGTQHILKLWANGNDDPEMVEVCQELREAGRQVFLDVVEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A      G  +GLNA   +QY+++I+N R   IG E  F    NP PW++  +    
Sbjct: 285 KEWADYLFKDGSMIGLNAEILKQYIEYISNNRMEAIGYEAPFAIKNNPLPWINTYLVSDN 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E+ +T Y   Q  A +  D
Sbjct: 345 VQVAPQESEITSYLVGQVDATVSDD 369


>gi|317164437|gb|ADV07978.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 377

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLSAGFEGANQNPIPWINAWLS 342


>gi|329119976|ref|ZP_08248648.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327463889|gb|EGF10203.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 384

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL+P F  + +NP PW++  + 
Sbjct: 292 KEWAAYLFKDGSMIGLNKDILCQYVEYITNHRMIAVGLDPAFPASNQNPIPWINAWLS 349


>gi|289664735|ref|ZP_06486316.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 349

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   E           A  LE  + 
Sbjct: 209 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDELTDYVHKAFEHAIDLETVWT 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 269 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 328 DFFEMRNASYKK 339


>gi|238760194|ref|ZP_04621340.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           aldovae ATCC 35236]
 gi|238701573|gb|EEP94144.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           aldovae ATCC 35236]
          Length = 376

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRAGEDDPEMAEIAIECQQQCYDLFVLAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW+ S ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGIPFATRTNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|261364564|ref|ZP_05977447.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           mucosa ATCC 25996]
 gi|288567131|gb|EFC88691.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           mucosa ATCC 25996]
          Length = 384

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFELFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 349


>gi|313668429|ref|YP_004048713.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           lactamica ST-640]
 gi|313005891|emb|CBN87347.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           lactamica 020-06]
          Length = 377

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFRLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|207345015|gb|EDZ71971.1| YGR180Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 224

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RD   + +F   +         HL TK   +    ++ EA  +E  Y 
Sbjct: 85  MPGLAMANRNICRDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYY 137

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             ++P    G++  S   Y++F+A+      G E  +    NPF +M +V     +  FF
Sbjct: 138 SNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFF 195

Query: 121 ETRVTEYQQGAGLK 134
           E +V++YQ+ + + 
Sbjct: 196 EKKVSDYQKASDMS 209


>gi|148653376|ref|YP_001280469.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           sp. PRwf-1]
 gi|148572460|gb|ABQ94519.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter sp. PRwf-1]
          Length = 377

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +IN +    ++P +   + +   +S  +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMINIMASGKDDPEMAEISAQCHNESIEIFRKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMS-EVIDL 113
             +A      G  +GLN     QY+++I N R   +GL  +F  ++ NP PW++  +   
Sbjct: 285 KEWAGYLFKDGSMIGLNKDILCQYVEYITNLRMEAVGLPGIFPESKSNPIPWINTWLSSD 344

Query: 114 KKEKNFFETRVTEY 127
             +    ET ++ Y
Sbjct: 345 NVQVAPQETEISSY 358


>gi|167623961|ref|YP_001674255.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           halifaxensis HAW-EB4]
 gi|167353983|gb|ABZ76596.1| Ribonucleoside-diphosphate reductase [Shewanella halifaxensis
           HAW-EB4]
          Length = 376

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++  ++   ++P +    KE +Q +  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILKIMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A      G  +GLN     QY+++I N R   +     +    NP PWM   +    
Sbjct: 285 KEWAKYLFKDGSMIGLNETILCQYVEYITNERMKSVNFASPYAEQTNPLPWMKNWLESDS 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E  V+ Y   Q  + +  D
Sbjct: 345 VQVAPQEVEVSSYLVGQIDSSIDDD 369


>gi|221134587|ref|ZP_03560892.1| ribonucleotide-diphosphate reductase subunit beta [Glaciecola sp.
           HTCC2999]
          Length = 376

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G ++  + I RDE+LHL     V+N      ++P +    KE +Q++R +   A   E
Sbjct: 225 MEGNSKIIRLIARDENLHLTSTQHVLNLWAKGKDDPEMAEIAKECEQEARDIFLNAVQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
             +A      G  +GLN      Y+++IAN+R   IGL   F  + NP PWM+  ++
Sbjct: 285 KEWAAFLFNNGSMIGLNEEILCSYVEYIANQRMAAIGLGQPFDVSSNPLPWMNNYLN 341


>gi|289670858|ref|ZP_06491933.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 349

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   +           A  LE  + 
Sbjct: 209 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWT 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 269 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 328 DFFEMRNASYKK 339


>gi|417659|sp|P32209|RIR2_SWPVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|347472|gb|AAC37857.1| ribonucleotide reductase [Swinepox virus]
          Length = 274

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL     ++   +++ +A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLLHPPSKEVITSIIIDAVNIEKEFL 235

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEP 95
              +P   +G+N     QY++F+A+R   ++G E 
Sbjct: 236 TVAIPVDLIGMNCCLMSQYIEFVADRLLTELGCEK 270


>gi|294625675|ref|ZP_06704297.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|294664800|ref|ZP_06730124.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292600044|gb|EFF44159.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292605431|gb|EFF48758.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 347

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   +           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETQWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|91775577|ref|YP_545333.1| ribonucleotide-diphosphate reductase subunit beta [Methylobacillus
           flagellatus KT]
 gi|91709564|gb|ABE49492.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Methylobacillus flagellatus KT]
          Length = 377

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 6/117 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P       E Q +   M   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHMLNIMRSGQDDPEFAGIASELQDECFEMFKRAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVI 111
             +A      G  +GLN     QY+++I N R   +GL   F   + NP PW++  +
Sbjct: 285 KKWADYLFKDGSMIGLNRDILCQYVEYITNNRMASVGLSAAFPNAKNNPIPWINTWL 341


>gi|58532963|ref|YP_195186.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2]
 gi|58331430|emb|CAF34216.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2]
          Length = 394

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLWTKEFQQK--SRTMLHEATLLEI 57
           M G A+    I RDES H+    ++IN+ K  ++P +     Q++     M  +    EI
Sbjct: 242 MEGNAKIISLIARDESQHMTITQNIINKWKAGDDPDMVEIAKQEENNVYDMFKKCVEEEI 301

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TENPFPWMSEVIDLK 114
            +A      G  +GLNA   ++Y+++ ANRR   IG++ +F    + NP PW    +  K
Sbjct: 302 IWADYLFRDGSMIGLNAKLLQKYVEWTANRRMKAIGMKQIFDVPLSNNPLPWTEHWLSSK 361

Query: 115 K-EKNFFETRVTEYQQGAGLKWD 136
             +    ET V  Y  G  +K D
Sbjct: 362 GLQVAPQETEVESYVIGG-IKQD 383


>gi|319638203|ref|ZP_07992966.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria
           mucosa C102]
 gi|317400476|gb|EFV81134.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria
           mucosa C102]
          Length = 384

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 349


>gi|52425023|ref|YP_088160.1| ribonucleotide-diphosphate reductase subunit beta [Mannheimia
           succiniciproducens MBEL55E]
 gi|52307075|gb|AAU37575.1| NrdF protein [Mannheimia succiniciproducens MBEL55E]
          Length = 376

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFLAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
            A+A      G  +GLN     QY+++I N R   +GL   F+   NP PW++  +
Sbjct: 285 KAWADYLFKDGSMIGLNKDILVQYVEYITNIRMQAVGLPLPFQARSNPIPWINAWL 340


>gi|24373963|ref|NP_718006.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           oneidensis MR-1]
 gi|24348405|gb|AAN55450.1|AE015682_5 ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           oneidensis MR-1]
          Length = 376

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDV--INQIKIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +  I Q   ++P +     E QQ++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILTIMQGGKDDPEMGEIAIECQQEAYNLFLKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N+R   + L   +    NP PWM   +
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEYITNQRMKSVNLPQPYAEQTNPLPWMKNWL 340


>gi|284799957|ref|ZP_05985309.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           subflava NJ9703]
 gi|284796454|gb|EFC51801.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           subflava NJ9703]
          Length = 377

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 342


>gi|298368555|ref|ZP_06979873.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298282558|gb|EFI24045.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 384

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 349


>gi|255065945|ref|ZP_05317800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca
           ATCC 29256]
 gi|255049856|gb|EET45320.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca
           ATCC 29256]
          Length = 377

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGSDDPEMAEIAVELQDECFKLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 342


>gi|269213593|ref|ZP_05982340.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           cinerea ATCC 14685]
 gi|269146056|gb|EEZ72474.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           cinerea ATCC 14685]
          Length = 377

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E Q++   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMLNLMRSGVDDPEMAEIAEELQEECFKLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPIGFEGANQNPIPWINAWLS 342


>gi|149197800|ref|ZP_01874849.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
           araneosa HTCC2155]
 gi|149139021|gb|EDM27425.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
           araneosa HTCC2155]
          Length = 376

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 5/117 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +I   +   ++P +     E + +   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQQMIQIFREGKDDPEMAEIAAECEGQVYQIFSSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
             +A      G  +GLNA     Y+++I N R    G + +F  T+NP PWM+  + 
Sbjct: 285 KEWAKFLFRDGSMIGLNADILGDYVEYITNVRLKASGYKNVFPTTQNPLPWMNSWLS 341


>gi|238794995|ref|ZP_04638591.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           intermedia ATCC 29909]
 gi|238725698|gb|EEQ17256.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           intermedia ATCC 29909]
          Length = 376

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHILNLMRSGEDDPEMAEIAIECQQQCYDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL   F    NP PW+ S ++   
Sbjct: 285 KEWAEYLFRDGSMIGLNKEILCQYVEYITNIRMQAVGLGVPFATRTNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|241760495|ref|ZP_04758588.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           flavescens SK114]
 gi|241318999|gb|EER55501.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           flavescens SK114]
          Length = 377

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGADDPEMAEIAVELQDECFKLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 342


>gi|117920413|ref|YP_869605.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           ANA-3]
 gi|117612745|gb|ABK48199.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. ANA-3]
          Length = 391

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDV--INQIKIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +  I Q   ++P +     E QQ++  +  +A   E
Sbjct: 240 MEGNAKIIRLIARDEALHLNSTQHILTIMQGGKDDPEMAEIAAECQQEAYNLFLKAAEQE 299

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A      G  +GLN     QY+++I N+R   + L   +    NP PWM   +    
Sbjct: 300 KEWAKYLFKDGSMIGLNEQILCQYVEYITNQRMKSVNLPLPYAELSNPLPWMKNWLESDA 359

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E  V+ Y   Q  + +  D
Sbjct: 360 VQVAPQEVEVSSYLVGQIDSAVDSD 384


>gi|225075859|ref|ZP_03719058.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens
           NRL30031/H210]
 gi|224952805|gb|EEG34014.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens
           NRL30031/H210]
          Length = 388

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 236 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGADDPEMAEIANELQDECFNLFKKAAEQE 295

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 296 KEWAAYLFKDGSMIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 353


>gi|323337480|gb|EGA78728.1| Rnr4p [Saccharomyces cerevisiae Vin13]
          Length = 328

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RD   + +F   +         HL TK   +    ++ EA  +E  Y 
Sbjct: 189 MPGLAMANRNICRDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYY 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             ++P    G++  S   Y++F+A+      G E  +    NPF +M +V     +  FF
Sbjct: 242 SNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFF 299

Query: 121 ETRVTEYQQGAGLK 134
           E +V++YQ+ + + 
Sbjct: 300 EKKVSDYQKASDMS 313


>gi|326784253|ref|YP_004324793.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
 gi|310003484|gb|ADO97880.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
          Length = 388

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES HL    +++ + K  ++P +    KE +   + M       E 
Sbjct: 236 MEGSAKILSLIARDESQHLVITQNILRKWKEGDDPEMKEIAKEEKGWVQHMFERTVNEEK 295

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLK 114
            +A     +G  +GLN      Y+++IANRR   IGL+P+F      NP PW    ++ K
Sbjct: 296 VWADYLFKQGSMIGLNDRLLHNYVEWIANRRMKSIGLDPMFDIPAKNNPLPWTEHWLNSK 355

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G  +K D
Sbjct: 356 GQQNAPQETEIESYVVGG-IKQD 377


>gi|88801048|ref|ZP_01116596.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
           MED297]
 gi|88776187|gb|EAR07414.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
           MED297]
          Length = 369

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL+    ++ Q     ++P +     E Q   R +  +A   E
Sbjct: 218 MEGNAKLIKLIARDEALHLSGTEFILRQWLHGGDDPQMQIVADEEQATIRQIFEDAAEQE 277

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
            A+A+     G  +GLNA    QY++++ ++R   + L P++   +NP PWM   + 
Sbjct: 278 KAWANYLFNDGSMIGLNAEILHQYIEYLTDQRLDALSLSPIYGRRDNPLPWMDNWVS 334


>gi|242012701|ref|XP_002427066.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
           [Pediculus humanus corporis]
 gi|212511324|gb|EEB14328.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
           [Pediculus humanus corporis]
          Length = 304

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 7/96 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         ++  K  + +   ++ +A  +E  + 
Sbjct: 214 MPGLTFSNELISRDEGLHCDFACLMFK-------YVVQKPTEDEICDIIKDAVAIEQEFL 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPL 96
            E +P   +G+N    ++Y++F+A+R   ++G + +
Sbjct: 267 TEALPVNLIGMNCSLMKKYIEFVADRLLVELGCKKV 302


>gi|294140834|ref|YP_003556812.1| ribonucleoside-diphosphate reductase subunit beta [Shewanella
           violacea DSS12]
 gi|293327303|dbj|BAJ02034.1| ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           violacea DSS12]
          Length = 376

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++  ++   ++P +    KE +Q +  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILKIMRAGADDPEMGEIAKECEQLAYDIFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N R   + L   +    NP PWM   +
Sbjct: 285 KEWAQYLFKDGSMIGLNQAILCQYVEYITNERMKSVNLPCHYDEITNPLPWMKNWL 340


>gi|126174279|ref|YP_001050428.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS155]
 gi|125997484|gb|ABN61559.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella baltica OS155]
          Length = 376

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +++ ++   ++P +     E QQ++  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILSIMQGGKDDPEMGEIAAECQQEAFDLFFKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A      G  +GLN     QY++FI N+R   + L   +    NP PWM   +    
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEFITNQRMKSVNLPQPYLEITNPLPWMKNWLESDA 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E  V+ Y   Q  + +  D
Sbjct: 345 VQVAPQEVEVSSYLVGQIDSAVDSD 369


>gi|325919223|ref|ZP_08181270.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325923021|ref|ZP_08184721.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325546491|gb|EGD17645.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325550297|gb|EGD21104.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
          Length = 347

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   +           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|91793308|ref|YP_562959.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           denitrificans OS217]
 gi|91715310|gb|ABE55236.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella denitrificans OS217]
          Length = 376

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++  ++   ++P +     E QQ++  + ++A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILALMQGGKDDPEMAEIAIECQQQAYDLFYKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N+R   + L   +    NP PWM   +
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEYITNQRMKSVHLPQPYAEISNPLPWMKNWL 340


>gi|51830370|gb|AAU09736.1| YGR180C [Saccharomyces cerevisiae]
          Length = 345

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RD   + +F   +         HL TK   +    ++ EA  +E  Y 
Sbjct: 206 MPGLAMANRNICRDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYY 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             ++P    G++  S   Y++F+A+      G E  +    NPF +M +V     +  FF
Sbjct: 259 SNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFF 316

Query: 121 ETRVTEYQQGAGLK 134
           E +V++YQ+ + + 
Sbjct: 317 EKKVSDYQKASDMS 330


>gi|221105497|ref|XP_002169241.1| PREDICTED: similar to ribonucleoside-diphosphate reductase small
           chain [Hydra magnipapillata]
          Length = 363

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +    I +DE +H  FG  +   I             ++   ++ EA  +  ++ 
Sbjct: 224 MKGLIQSNNLIAKDEGMHTIFGCVIYTFIIYRL-------SFEEICELMKEAVEICKSFT 276

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP--FPWMSEVIDLKKEKN 118
            + +    +G+N      Y++++A+R    +G E +F  T+ P  F +M  +  L K+ N
Sbjct: 277 KDAICVDMIGMNVELMYNYIEYVADRLMVYLGYEKIF-MTKIPDQFQFMDTIGFLNKD-N 334

Query: 119 FFETRVTEYQQG 130
           FFE R TEYQ+ 
Sbjct: 335 FFERRATEYQKA 346


>gi|6321619|ref|NP_011696.1| Rnr4p [Saccharomyces cerevisiae S288c]
 gi|1710402|sp|P49723|RIR4_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 2;
           AltName: Full=Ribonucleotide reductase R2 subunit 2;
           AltName: Full=Ribonucleotide reductase small subunit 2
 gi|15826570|pdb|1JK0|B Chain B, Ribonucleotide Reductase Y2y4 Heterodimer
 gi|52695527|pdb|1SMS|A Chain A, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695528|pdb|1SMS|B Chain B, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
           From Saccharomyces Cerevisiae
 gi|915546|gb|AAB72236.1| Rnr4p [Saccharomyces cerevisiae]
 gi|1323319|emb|CAA97206.1| RNR4 [Saccharomyces cerevisiae]
 gi|285812375|tpg|DAA08275.1| TPA: Rnr4p [Saccharomyces cerevisiae S288c]
 gi|323304781|gb|EGA58540.1| Rnr4p [Saccharomyces cerevisiae FostersB]
 gi|323308943|gb|EGA62174.1| Rnr4p [Saccharomyces cerevisiae FostersO]
          Length = 345

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RD   + +F   +         HL TK   +    ++ EA  +E  Y 
Sbjct: 206 MPGLAMANRNICRDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYY 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             ++P    G++  S   Y++F+A+      G E  +    NPF +M +V     +  FF
Sbjct: 259 SNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFF 316

Query: 121 ETRVTEYQQGAGLK 134
           E +V++YQ+ + + 
Sbjct: 317 EKKVSDYQKASDMS 330


>gi|151943458|gb|EDN61769.1| ribonucleotide reductase [Saccharomyces cerevisiae YJM789]
 gi|190406805|gb|EDV10072.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
 gi|256270921|gb|EEU06048.1| Rnr4p [Saccharomyces cerevisiae JAY291]
 gi|259146684|emb|CAY79941.1| Rnr4p [Saccharomyces cerevisiae EC1118]
 gi|323333575|gb|EGA74969.1| Rnr4p [Saccharomyces cerevisiae AWRI796]
 gi|323348450|gb|EGA82695.1| Rnr4p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 345

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+A   + I RD   + +F   +         HL TK   +    ++ EA  +E  Y 
Sbjct: 206 MPGLAMANRNICRDRGAYTDFSCLLF-------AHLRTKPNPKIIEKIITEAVEIEKEYY 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             ++P    G++  S   Y++F+A+      G E  +    NPF +M +V     +  FF
Sbjct: 259 SNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAV-NPFEFMEDVATA-GKTTFF 316

Query: 121 ETRVTEYQQGAGLK 134
           E +V++YQ+ + + 
Sbjct: 317 EKKVSDYQKASDMS 330


>gi|297250515|ref|ZP_06864465.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           polysaccharea ATCC 43768]
 gi|296838835|gb|EFH22773.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           polysaccharea ATCC 43768]
          Length = 377

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|322832009|ref|YP_004212036.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
 gi|321167210|gb|ADW72909.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
          Length = 376

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL      +N ++   ++P +     E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHALNLLRSGQDDPEMAEIALECQQECHDLFVLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I N R   +GL+  FK   NP PW++  ++   
Sbjct: 285 KDWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLDAPFKTRSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|66770372|ref|YP_245134.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|188993572|ref|YP_001905582.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. B100]
 gi|66575704|gb|AAY51114.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|167735332|emb|CAP53546.1| Ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris]
          Length = 347

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   +           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|161353784|ref|NP_274308.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis MC58]
 gi|304387414|ref|ZP_07369605.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           meningitidis ATCC 13091]
 gi|304338507|gb|EFM04626.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           meningitidis ATCC 13091]
 gi|316984078|gb|EFV63056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Neisseria
           meningitidis H44/76]
 gi|325134468|gb|EGC57113.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M13399]
 gi|325140485|gb|EGC63006.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis CU385]
 gi|325144569|gb|EGC66868.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240013]
 gi|325200084|gb|ADY95539.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis H44/76]
 gi|325204292|gb|ADY99745.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240355]
 gi|325205936|gb|ADZ01389.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M04-240196]
          Length = 377

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|7226528|gb|AAF41664.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis MC58]
 gi|254670476|emb|CBA06168.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha153]
          Length = 384

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|325914792|ref|ZP_08177129.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538985|gb|EGD10644.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 349

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   +           A  LE  + 
Sbjct: 209 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWT 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 269 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 327

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 328 DFFEMRNASYKK 339


>gi|21233407|ref|NP_639324.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|21115247|gb|AAM43206.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
          Length = 347

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  ++I  I  EN  L   +           A  LE  + 
Sbjct: 207 MTGTGKIISFINRDELAHSKFISELIRAIIGENQALQGDQLTDYVHKAFEHAIDLETVWT 266

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID--LKKEK 117
            E +  G  G++     +Y+++ AN+    +G+E L++   +N  PW+    D   + + 
Sbjct: 267 AEVL-DGIDGIDVDEMIRYVKYRANKMAGMLGIEKLYEGANDNVMPWIKAYADNFTETKT 325

Query: 118 NFFETRVTEYQQ 129
           +FFE R   Y++
Sbjct: 326 DFFEMRNASYKK 337


>gi|269862698|ref|XP_002650940.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220065381|gb|EED43116.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 332

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 10/108 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I  +               ++ EA  +E  + 
Sbjct: 235 MPGLTFSNELISRDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFL 285

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            E++P   +G+N     QY++F+A+R    +G + ++  +  PF +M 
Sbjct: 286 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVST-PFDFME 332


>gi|319410557|emb|CBY90925.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase) [Neisseria meningitidis WUE 2594]
 gi|325208250|gb|ADZ03702.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis NZ-05/33]
          Length = 384

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|218768312|ref|YP_002342824.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis Z2491]
 gi|121052320|emb|CAM08650.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis Z2491]
 gi|261392428|emb|CAX49973.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase) [Neisseria meningitidis 8013]
          Length = 377

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|225734460|gb|ACO25228.1| hypothetical protein [Epizootic haematopoietic necrosis virus]
          Length = 387

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDE++H+     +   +  E P +  ++  +  +        LE A+ 
Sbjct: 241 MKGMGKVVEWSVRDENMHVEGVSKLFETLNSEYPWVVNEDLIELFKEDAERVAELEEAFV 300

Query: 61  HETMPK--GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKE 116
                +     GL     + Y+ ++ N R   +GL  L +      P PW+  +ID    
Sbjct: 301 DLAFQECGPVCGLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDGADL 360

Query: 117 KNFFETRVTEYQQGA 131
            NFFE  VTEY+ G 
Sbjct: 361 TNFFENHVTEYETGG 375


>gi|225023977|ref|ZP_03713169.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC
           23834]
 gi|224943002|gb|EEG24211.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC
           23834]
          Length = 384

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E +     +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRSGTDDPEMAEIAAELENDCFELFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F   T+NP PW++  + 
Sbjct: 292 KEWAEYLFKDGSMIGLNKDILCQYVEYITNHRMMAVGLNAAFPAATQNPIPWINAWLS 349


>gi|127512873|ref|YP_001094070.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           loihica PV-4]
 gi|126638168|gb|ABO23811.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella loihica PV-4]
          Length = 376

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++  ++   ++P +    KE +Q +  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILKLMQGGKDDPEMAEIAKECEQTAIDIFVKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N R   + L   +    NP PWM   +
Sbjct: 285 KEWAKYLFKDGSMIGLNEQILCQYVEYITNERMKSVNLVSPYADQSNPLPWMKNWL 340


>gi|161870162|ref|YP_001599332.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis 053442]
 gi|161595715|gb|ABX73375.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis 053442]
          Length = 384

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|326783253|ref|YP_004323801.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33]
 gi|310005200|gb|ADO99589.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33]
          Length = 296

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHL--WTKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES HL    +++N+ +  ++P +    KE Q    +M   A   E 
Sbjct: 144 MEGSAKILSLIARDESQHLVLTQNILNKWRDGDDPEMDIIAKEEQSWVMSMFQRAVDEEK 203

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLK 114
            +A      G  +GLN      Y+++IANRR   I ++P+F      NP PW    ++ K
Sbjct: 204 MWAEYLFKNGSMIGLNERLLHNYVEWIANRRMKAICIKPMFDIPAKNNPLPWTEHWLNSK 263

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
            ++N   ET +  Y  G  +K D
Sbjct: 264 GQQNAPQETEIESYVIGG-IKQD 285


>gi|254805092|ref|YP_003083313.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha14]
 gi|254668634|emb|CBA06257.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha14]
          Length = 384

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|308389409|gb|ADO31729.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis alpha710]
          Length = 384

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 349


>gi|121635003|ref|YP_975248.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis FAM18]
 gi|120866709|emb|CAM10461.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis FAM18]
 gi|325128288|gb|EGC51172.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis N1568]
 gi|325130346|gb|EGC53112.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis OX99.30304]
 gi|325132508|gb|EGC55201.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M6190]
 gi|325136206|gb|EGC58814.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M0579]
 gi|325138282|gb|EGC60851.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis ES14902]
 gi|325142424|gb|EGC64828.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis 961-5945]
 gi|325198443|gb|ADY93899.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis G2136]
 gi|325201998|gb|ADY97452.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240149]
          Length = 377

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++  + 
Sbjct: 285 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWINAWLS 342


>gi|13358428|ref|NP_078636.1| Ribonucleotide reductase small subunit [Lymphocystis disease virus
           1]
          Length = 378

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 3/130 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDE++H+     +      E   + T+EF    R +  E   LE  + 
Sbjct: 240 MKGMGKVIEWSIRDENIHVEGLCKLFKTFISEYSFILTEEFFSAVRKIQAEVLQLETDFI 299

Query: 61  HETMPK--GFVGLNAPSCEQYMQFIANRRCHQIG-LEPLFKYTENPFPWMSEVIDLKKEK 117
                      GL       Y+++I  RR  Q+G LE       NP  W+S +I  +   
Sbjct: 300 ILLFTNITEIKGLTKLCMINYVKYILQRRTEQLGLLESTEVLLTNPIDWISWLIAGRNIT 359

Query: 118 NFFETRVTEY 127
           NFFE RVTEY
Sbjct: 360 NFFENRVTEY 369


>gi|190150315|ref|YP_001968840.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303253584|ref|ZP_07339722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307245900|ref|ZP_07527985.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307247988|ref|ZP_07530018.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307254872|ref|ZP_07536697.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259315|ref|ZP_07541044.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307263658|ref|ZP_07545269.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915446|gb|ACE61698.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302647504|gb|EFL77722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306853260|gb|EFM85480.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306855503|gb|EFM87676.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306862169|gb|EFM94138.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866682|gb|EFM98541.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306871035|gb|EFN02768.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 376

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL    +++N I    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     +Y+++I N R   +GL   F  + NP PW++  ++   
Sbjct: 285 KEWAAYLFKDGSMIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|45686047|ref|YP_003810.1| unknown [Ambystoma tigrinum virus]
 gi|37722471|gb|AAP33216.1| unknown [Ambystoma tigrinum stebbensi virus]
          Length = 387

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDE++H+     +   +  E P + T++  +  +        LE A+ 
Sbjct: 241 MKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTEDLIELFKEDAERVAELEEAFV 300

Query: 61  HETMPK--GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKE 116
                +     GL     + Y+ ++ N R   +GL  L +      P PW+  +ID    
Sbjct: 301 DLAFQECGPVCGLEPKQVKDYVLYVINLRASNMGLPRLIERAPEACPIPWVKWLIDGADL 360

Query: 117 KNFFETRVTEYQQGA 131
            NFFE  VTEY+ G 
Sbjct: 361 TNFFENHVTEYETGG 375


>gi|126208467|ref|YP_001053692.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae L20]
 gi|165976419|ref|YP_001652012.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|303251074|ref|ZP_07337260.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307250239|ref|ZP_07532194.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307252630|ref|ZP_07534523.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307261475|ref|ZP_07543145.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|126097259|gb|ABN74087.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165876520|gb|ABY69568.1| ribonucleoside-diphosphate reductase, beta chain [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|302650084|gb|EFL80254.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306857725|gb|EFM89826.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306859875|gb|EFM91895.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306868827|gb|EFN00634.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 376

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL    +++N I    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     +Y+++I N R   +GL   F  + NP PW++  ++   
Sbjct: 285 KEWAAYLFKDGSMIGLNEDILVKYVEYITNIRMQAVGLPRPFAASSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|17567153|ref|NP_508269.1| hypothetical protein F19G12.2 [Caenorhabditis elegans]
 gi|10864352|gb|AAG24065.1| Hypothetical protein F19G12.2 [Caenorhabditis elegans]
          Length = 668

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 9/129 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I     LH N      N  +        K  + +   +++E+ L+E  + 
Sbjct: 531 LPGLTHSNELISMF-LLHPNCFFSTFNLQRRR------KPAESRITEIINESVLVEQDFV 583

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     +Y++F+A+    ++G    +  T+NPF +M E I ++ + NFF
Sbjct: 584 RESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN-TKNPFDFM-ENISIEGKTNFF 641

Query: 121 ETRVTEYQQ 129
           E RV+EYQ+
Sbjct: 642 EKRVSEYQR 650


>gi|255928974|ref|YP_003097286.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4]
 gi|255705260|emb|CAR63249.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4]
          Length = 394

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 8/143 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLW--TKEFQQKSRTMLHEATLLEI 57
           + G A+    I RDES H+    +++N+ K  ++P +    KE ++    M  +    E 
Sbjct: 242 LEGSAKIIGLIARDESQHMTITQNILNKWKEGDDPEMVQIAKEEEENVYDMFRQCVEEEK 301

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLK 114
            +A      G  +GLN     +Y+++ ANRR   IGL+ +F    + NP PW    +  K
Sbjct: 302 LWAEYLFKDGSIIGLNDKLLSKYVEWTANRRLKSIGLKAIFDTPVSNNPLPWTEHWLSSK 361

Query: 115 K-EKNFFETRVTEYQQGAGLKWD 136
             +    ET V  Y  G+ +K D
Sbjct: 362 GMQVAPQETEVESYLIGS-IKQD 383


>gi|307257037|ref|ZP_07538813.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864521|gb|EFM96428.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 376

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL    +++N I    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     +Y+++I N R   +GL   F    NP PW++  ++   
Sbjct: 285 KEWAAYLFKDGSMIGLNEDILVKYVEYITNIRMQAVGLPRPFATASNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|326784150|ref|YP_004324543.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1]
 gi|310004882|gb|ADO99273.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1]
          Length = 395

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 7/138 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI-ENPHLW--TKEFQQKSRTMLHEATLLEI 57
           M G A+    I RDES H+    +++N+ K  ++P +    +E ++    M ++    E+
Sbjct: 243 MEGNAKIISLIARDESQHMTITQNILNKWKQGDDPDMVEIAQEEEKNVYEMFNKCVEEEV 302

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLK 114
            +A      G  +GLNA   ++Y+++ ANRR   IGL+P F    + NP PW    +  +
Sbjct: 303 IWADYLFRDGSMIGLNAKLLQKYVEWTANRRMKSIGLKPTFDAPLSNNPLPWTEHWLSSR 362

Query: 115 K-EKNFFETRVTEYQQGA 131
             +    ET V  Y  G 
Sbjct: 363 GLQVAPQETEVESYVIGG 380


>gi|157961884|ref|YP_001501918.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           pealeana ATCC 700345]
 gi|157846884|gb|ABV87383.1| Ribonucleoside-diphosphate reductase [Shewanella pealeana ATCC
           700345]
          Length = 376

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 5/116 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDV--INQIKIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    +  I     ++P +    KE +Q +  +  +A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNSTQHILKIMHAGKDDPEMAEIAKECEQTAIDIFIKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
             +A      G  +GLN     QY+++I N R   +     +    NP PWM   +
Sbjct: 285 KEWAKYLFKDGSMIGLNETILCQYVEYITNERMKAVNFASPYAEQTNPLPWMKNWL 340


>gi|322514736|ref|ZP_08067762.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
 gi|322119331|gb|EFX91447.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
          Length = 376

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL    +++N +    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEYLHLTGTQNMLNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     +Y+++I N R   +GL   F  + NP PW++  ++   
Sbjct: 285 KEWAAYLFKDGSMIGLNEDILVKYVEYITNIRMQAVGLPRPFATSSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|237808189|ref|YP_002892629.1| ribonucleotide-diphosphate reductase subunit beta [Tolumonas
           auensis DSM 9187]
 gi|237500450|gb|ACQ93043.1| ribonucleotide reductase [Tolumonas auensis DSM 9187]
          Length = 377

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +    +E   +   +  +A   E
Sbjct: 225 MEGNAKIIKMIARDEALHLTGTQHMLNILREGNDDPEMAEIARELHDECFALFKKAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY++FI N R   +GL   F    +NP PW++  ++
Sbjct: 285 KEWASYLFKDGSMLGLNKDILCQYVEFITNVRMQGVGLPLAFDADRQNPLPWINTWLN 342


>gi|71892252|ref|YP_277986.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Blochmannia pennsylvanicus str. BPEN]
 gi|71796358|gb|AAZ41109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Blochmannia pennsylvanicus str. BPEN]
          Length = 376

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHLN    ++N ++   ++P +     E QQ+S  +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLNATQHILNLMRSGSDDPEMADISTECQQESYALFLMAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
             +A+     G  +GLN     QY+++I N R   IGL   F    N  PW++  + 
Sbjct: 285 KNWANYLFKDGSMIGLNKDILCQYIEYITNIRMQAIGLRTPFNIKSNVIPWINSWLS 341


>gi|238021387|ref|ZP_04601813.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147]
 gi|237868367|gb|EEP69373.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147]
          Length = 384

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   E         E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRGGAEGAEWAEIAAELQNECFELFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL+P F+  T+NP PW++  + 
Sbjct: 292 KEWAEYLFKDGSMIGLNKDILCQYVEYITNARMLAVGLQPAFEKATQNPIPWINTWLS 349


>gi|33519930|ref|NP_878762.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Blochmannia floridanus]
 gi|33504276|emb|CAD83168.1| ribonucleoside-diphosphate reductase 1 beta chain [Candidatus
           Blochmannia floridanus]
          Length = 376

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWTKE--FQQKSRTMLHEATLLE 56
           M G A+  ++I RDESLHLN    ++N ++   ++P +       Q++S  +   A   E
Sbjct: 225 MEGNAKIIRFIARDESLHLNATQHILNLMRSGSDDPEMVDISLICQEESYNLFLMAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +AH     G  +GLN     QY+++I N R   IGL+  F    N  PW++  +    
Sbjct: 285 KTWAHYLFKDGSMIGLNKEILCQYIEYITNIRMQAIGLKTPFNTKTNSIPWINAWLSSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E   + Y
Sbjct: 345 VQVAPQEVESSSY 357


>gi|18656506|gb|AAL77807.1|AF389451_14 ribonucleoside-diphosphate reductase beta subunit [Tiger frog
           virus]
          Length = 387

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  ++ +RDE++H+     +   +  E P + TK+  +  +        LE A+ 
Sbjct: 241 MKGMGKVVEWSVRDENIHVEGVSKLFETLNSEYPWVVTKDIIELFKEDAERVAELEEAFV 300

Query: 61  HETMPK--GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN--PFPWMSEVIDLKKE 116
                +      L     + Y+ ++ N R   +GL  L +      P PW+  +ID    
Sbjct: 301 DLAFQECGPVCELEPKQVKDYVLYVINLRAANMGLPKLIERAPEACPIPWVKWLIDGADL 360

Query: 117 KNFFETRVTEYQQGA 131
            NFFE  VTEY+ G 
Sbjct: 361 TNFFENHVTEYETGG 375


>gi|254672337|emb|CBA05511.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha275]
          Length = 345

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++  +     E Q +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQLFKKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMS 108
             +A      G  +GLN     QY+++I N R   +GL   F+   +NP PW++
Sbjct: 292 KEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPIPWIN 345


>gi|213609160|ref|ZP_03368986.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 144

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 6/125 (4%)

Query: 9   QYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLEIAYAHETM 64
           + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E  +A    
Sbjct: 1   RLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQEKEWADYLF 60

Query: 65  PKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFET 122
             G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E 
Sbjct: 61  RDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEV 120

Query: 123 RVTEY 127
            V+ Y
Sbjct: 121 EVSSY 125


>gi|119944866|ref|YP_942546.1| ribonucleotide-diphosphate reductase subunit beta [Psychromonas
           ingrahamii 37]
 gi|119863470|gb|ABM02947.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychromonas ingrahamii 37]
          Length = 381

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           + G A+  + I RDE+LHLN    ++N      ++P +     E   + R +  +A   E
Sbjct: 230 LEGNAKIIKLIARDEALHLNSTQQILNLWADGKDDPEMAEIAIECFAEGREIFLQAAQQE 289

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++IAN R   IG  P F+   NP PW+ + ++   
Sbjct: 290 KDWAKYLFKDGSMIGLNEQILSQYVEYIANLRMQAIGYAPEFEVKSNPIPWINNWLVSDN 349

Query: 115 KEKNFFETRVTEY 127
            +    ET ++ Y
Sbjct: 350 VQVAPQETEISSY 362


>gi|294788520|ref|ZP_06753762.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella
           muelleri ATCC 29453]
 gi|294483397|gb|EFG31082.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella
           muelleri ATCC 29453]
          Length = 384

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E   +   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRNGTDDPEMAEIAAELHDECVALFKKAAAQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F    +NP PW++  + 
Sbjct: 292 KEWAAYLFKDGSMIGLNKDILGQYVEYITNLRMSAVGLPQAFPKALQNPIPWINAWLS 349


>gi|255026984|ref|ZP_05298970.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J2-003]
          Length = 336

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 4/122 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +   +I RDE  H  F  +VI  I  ENP L T+E  + +      A  LE  ++
Sbjct: 209 MTGTGKIISFINRDELAHSKFISEVIRAILGENPELQTEELVEYTHEAFRHAVELETEWS 268

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID--LKKEK 117
            E +  G  G++      Y+++ AN+    +G+  L+  +++N   W+    D   + + 
Sbjct: 269 EEVLQ-GIEGIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKT 327

Query: 118 NF 119
           +F
Sbjct: 328 DF 329


>gi|33152746|ref|NP_874099.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           ducreyi 35000HP]
 gi|33148970|gb|AAP96488.1| ribonucleoside-diphosphate reductase, beta chain [Haemophilus
           ducreyi 35000HP]
          Length = 376

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     ++N I    ++P +     E QQ++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEYLHLAGTQQMLNIIASGQDDPEMAEIAIECQQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     +Y+++I N R   +GL   F    NP PW++  ++   
Sbjct: 285 KEWAEYLFKDGSMIGLNKEILVKYVEYITNIRMQSVGLPLPFATQSNPIPWINAWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|212638239|ref|YP_002314759.1| ribonucleotide-diphosphate reductase subunit beta [Anoxybacillus
           flavithermus WK1]
 gi|212559719|gb|ACJ32774.1| Ribonucleotide reductase, beta subunit [Anoxybacillus flavithermus
           WK1]
          Length = 345

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 5/138 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW-TKEFQQKSRTMLHEATLLEIAY 59
           M+  +    YI +DE  H  F   ++  +  ENP +     F       + EA   E  +
Sbjct: 204 MLKTSTMISYINKDELCHSYFISQLVRAVLWENPQIDENGAFSAWIYDYIDEAIRYETEW 263

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLK---KE 116
           +   + +   G++    E+Y++++ N+R   +GL+  +   EN  PW+    D      +
Sbjct: 264 SRFVL-RDIDGIDVIEMEKYIEYLGNKRLRMLGLDDRYDADENSMPWIRVFSDENVNLGK 322

Query: 117 KNFFETRVTEYQQGAGLK 134
            +FFE R   Y +   + 
Sbjct: 323 TDFFEARPRSYTKTTDVN 340


>gi|311085920|gb|ADP66002.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. LL01 (Acyrthosiphon pisum)]
 gi|311086491|gb|ADP66572.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. TLW03 (Acyrthosiphon pisum)]
 gi|311087626|gb|ADP67705.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. JF98 (Acyrthosiphon pisum)]
          Length = 359

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI----KIENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +      EN      E ++++  +   A   E
Sbjct: 208 MEGNAKIIRLIARDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQE 267

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A      G  +GLN     QY+++I N R H IG +  FK   NP PW+++ +    
Sbjct: 268 KKWASYLFKSGSMLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWINDWLTSDN 327

Query: 115 KEKNFFETRVTEY 127
            +    ET ++ Y
Sbjct: 328 IQIAPQETEISSY 340


>gi|15616797|ref|NP_240009.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219681552|ref|YP_002467937.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|219682108|ref|YP_002468492.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|257471235|ref|ZP_05635234.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. LSR1 (Acyrthosiphon pisum)]
 gi|11134533|sp|P57275|RIR2_BUCAI RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|25285834|pir||G84950 ribonucleoside-diphosphate reductase (EC 1.17.4.1) nrdB [imported]
           - Buchnera sp. (strain APS)
 gi|10038860|dbj|BAB12895.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219621841|gb|ACL29997.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|219624395|gb|ACL30550.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|311087074|gb|ADP67154.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. JF99 (Acyrthosiphon pisum)]
          Length = 376

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI----KIENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +      EN      E ++++  +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHILNLLSNIKNNENMEDVVLECKEEAINIFISAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A      G  +GLN     QY+++I N R H IG +  FK   NP PW+++ +    
Sbjct: 285 KKWASYLFKSGSMLGLNKDILCQYIEYITNIRMHAIGFKMPFKKQSNPIPWINDWLTSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    ET ++ Y
Sbjct: 345 IQIAPQETEISSY 357


>gi|215275538|sp|P0C8I0|RIR2_ASFK5 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L   + 
Sbjct: 184 MPGLVSYNEFISRDEGMHCSFACFLISNYLNNIPE------EKIIHKILKEAVELVDEFI 237

Query: 61  HETMPKG---FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKE 116
                K      G +     QY+++  +  C  +  + ++K  ENPFP M++  ++  ++
Sbjct: 238 SYAFDKARGSVPGFSKEMLFQYIRYFTDNLCFMLQCKSIYK-VENPFPQMTKFFLNEVEK 296

Query: 117 KNFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 297 TNFFELRPTQYQ 308


>gi|238897538|ref|YP_002923217.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229465295|gb|ACQ67069.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 376

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     +++ ++   ++P +    +E QQ+   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLMGTQHMLDLMRSGKDDPEMADIAQECQQECSDLFLLAAQQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY++++ N R   + L+  F    NP PW+ S ++   
Sbjct: 285 KEWAAYLFRDGSMIGLNQDILCQYIEYMTNIRMQAVKLDAPFSIRTNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|27904669|ref|NP_777795.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
 gi|38605263|sp|Q89AS5|RIR2_BUCBP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|27904066|gb|AAO26900.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
          Length = 376

 Score =  120 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +      E     +KE  ++   +    +  E
Sbjct: 225 MEGNAKIIRLIARDEALHLTSTQHILNILHNDKNNEGMSDISKECYEECYHLFIRVSDQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   IGL   FK   NP PW+ S +I   
Sbjct: 285 KIWAKYLFQNGSMLGLNQEILSQYIEYITNIRMKAIGLPSPFKILSNPIPWINSWLISDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEISVSSY 357


>gi|325268103|ref|ZP_08134749.1| ribonucleotide-diphosphate reductase beta subunit [Kingella
           denitrificans ATCC 33394]
 gi|324980488|gb|EGC16154.1| ribonucleotide-diphosphate reductase beta subunit [Kingella
           denitrificans ATCC 33394]
          Length = 384

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 6/118 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   E        ++ QQ+   +  +A   E
Sbjct: 232 MEGNAKIIKLIARDEALHLTSTQHMLNLMRGGSEGTEWAQIAQDLQQECFDLFVKAAEQE 291

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFK-YTENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R   +GL   F   T+NP PW++  + 
Sbjct: 292 KEWASYLFKDGSMIGLNKDILCQYVEYITNHRMLAVGLPVAFPKSTQNPIPWINAWLS 349


>gi|269865122|ref|XP_002651812.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063829|gb|EED42244.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 336

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 9/106 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +   I  +               ++ EA  +E  + 
Sbjct: 207 MPGLTFSNELISRDEGLHTDFACLLHKYINNK---------CTVIEDIVREAVAIEQEFL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 106
            E++P   +G+N     QY++F+A+R    +G   ++ +  +   W
Sbjct: 258 SESLPVSLIGMNCKLMCQYIEFVADRLLFALGERKIYTFLTHSISW 303


>gi|319779630|ref|YP_004130543.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Taylorella equigenitalis MCE9]
 gi|317109654|gb|ADU92400.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Taylorella equigenitalis MCE9]
          Length = 377

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 6/117 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +    ++P +     E + +   +   A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMLNIMSSGADDPEMAHIASELKNQCFELFKSAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVI 111
            A+A      G  +GLN     QY+++I N R   +GLE  F  ++ NP PW++  +
Sbjct: 285 KAWAEYLFKDGSMIGLNKEILIQYVEYITNIRMSAVGLEEAFPQSKQNPIPWINTWL 341


>gi|90409249|ref|ZP_01217354.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp.
           CNPT3]
 gi|90309647|gb|EAS37827.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp.
           CNPT3]
          Length = 381

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           + G A+  + I RDE+LHLN    ++N      ++P +     E   K R +   A   E
Sbjct: 230 LEGNAKIIKLIARDEALHLNSTQQILNIWADGKDDPEMAEIAIECHAKGRDIFLTAAAQE 289

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN     QY+++I+N R   IG E  F+   NP PW++  +I   
Sbjct: 290 KEWAAYLFKDGSMIGLNEVILCQYVEYISNVRMQAIGYEAPFEIKNNPIPWINHWLISDN 349

Query: 115 KEKNFFETRVTEY 127
            +    E  ++ Y
Sbjct: 350 VQVAPQEAEISSY 362


>gi|212712302|ref|ZP_03320430.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
           30120]
 gi|212685048|gb|EEB44576.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
           30120]
          Length = 380

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPH----LWTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++             E +++   +  +A   E
Sbjct: 229 MEGNAKIIKLIARDEALHLTGTQHMLNLLRSGQDDPEMAEIAAECEEECYRLFVDAAEQE 288

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A     +G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++   
Sbjct: 289 KEWAEYLFSEGSMIGLNKDILCQYVEYITNIRMQAVGLKLPFEARSNPIPWINAWLVSDN 348

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 349 VQVAPQEVEVSSY 361


>gi|116326775|ref|YP_803312.1| hypothetical protein TNAV2c_gp089 [Trichoplusia ni ascovirus 2c]
 gi|102231783|gb|ABF70606.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
          Length = 269

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I RDE LH +F   + N       ++  K    +   +L EA ++E  + 
Sbjct: 160 LPGLTFSNELISRDEGLHTDFACLMYN-------YVVQKPPNSRVIEILKEAVVIEKDFL 212

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 104
            + +P   +G+N     QY++F+A+R  +++  E  +   +NP 
Sbjct: 213 TDALPVRLLGMNCDLMSQYIEFVADRLLYELIGEKYYN-AKNPI 255


>gi|270000178|gb|ACZ57936.1| m015L [Myxoma virus]
          Length = 103

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 55/92 (59%), Gaps = 2/92 (2%)

Query: 42  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
           +++  +++ EA ++E  +  E +P   +G+N     QY++F+A+R   ++G   +F    
Sbjct: 1   EERVASIIKEAVVIEQRFLTEALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIF-SAT 59

Query: 102 NPFPWMSEVIDLKKEKNFFETRVTEYQQGAGL 133
           NPF +M E I L+ + NFFE RV++YQ+   +
Sbjct: 60  NPFDFM-ENISLEGKTNFFEKRVSDYQRMGVV 90


>gi|195953600|ref|YP_002121890.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933212|gb|ACG57912.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
          Length = 319

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/124 (29%), Positives = 71/124 (57%), Gaps = 4/124 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +  +A   ++I++DE+ HL FGI ++N++  +       +++ K R ++ EA  +E  YA
Sbjct: 198 LKNVAALVRWILKDETRHLAFGIYLLNELLKDK---NKNDYKDKFRVLMEEAVDIETEYA 254

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
              MP+  +GL+  +   Y++++A+RR   +G + ++   +NP  W++   DL    NFF
Sbjct: 255 RVAMPEKIIGLSFETYTSYVKYLADRRMRSLGFDAIY-GQKNPMKWLTTQTDLPDLTNFF 313

Query: 121 ETRV 124
           E +V
Sbjct: 314 EAKV 317


>gi|94676795|ref|YP_588829.1| ribonucleotide-diphosphate reductase subunit beta [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
 gi|94219945|gb|ABF14104.1| ribonucleoside-diphosphate reductase, beta subunit [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
          Length = 376

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLWTK--EFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q  S  +   A   E
Sbjct: 225 MEGNAKIIRLIARDEALHLAGTQHMLNLMRLGKDDPEMADIALECQHDSYHLFLXAANQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +A      G  +GLN     QY+++I N R   + L+  F    NP PW+ S ++   
Sbjct: 285 KDWASYLFRDGSMIGLNEEILCQYIEYITNIRMQAVLLDLPFATRSNPIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 345 VQVAPQEVEVSSY 357


>gi|132618|sp|P26713|RIR2_ASFM2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L   + 
Sbjct: 184 MPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFI 237

Query: 61  HETMPKG---FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKE 116
           +    K      G +     QY+++  +  C  +  + ++    NPFP M++  ++  ++
Sbjct: 238 NYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYN-VGNPFPQMTKFFLNEVEK 296

Query: 117 KNFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 297 TNFFELRPTQYQ 308


>gi|51557509|ref|YP_068343.1| ribonucleotide reductase subunit 2 [Suid herpesvirus 1]
 gi|1710400|sp|P50645|RIR2_SUHVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|437737|emb|CAA50977.1| ribonucleotide reductase [Suid herpesvirus 1]
 gi|525265|emb|CAA56776.1| ribonucleotid reductase, small subunit [Suid herpesvirus 1]
 gi|40253968|tpg|DAA02163.1| TPA_exp: small subunit of ribonucleotide reductase [Suid
           herpesvirus 1]
 gi|1090510|prf||2019240B ribonucleotide reductase:SUBUNIT=small
          Length = 303

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +   +I RDE++H +    + N    + P    +  + +   +  EA  +E  +    
Sbjct: 176 TCQSNDFISRDEAIHTSASCCIYNNYLGDAP----RPDEARIHQLFAEAVEIECEFLRAR 231

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            P+  + L+ P+   Y+++ A+R    IG  PLF        +   ++  +K  NFFE R
Sbjct: 232 APRDSLLLDLPAIISYVRYSADRLLQAIGASPLFGAPAPAADFPMALMVAEKHTNFFERR 291

Query: 124 VTEYQQGAGLKW 135
            T Y  G  +  
Sbjct: 292 STNY-TGTVVND 302


>gi|297265423|ref|XP_001091447.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Macaca
           mulatta]
          Length = 704

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 51/134 (38%), Gaps = 39/134 (29%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE                                       L     
Sbjct: 597 MPGLTFSNELISRDE-------------------------------------VSLNQIIG 619

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
                   +G+N    +QY++F+A+R   ++G   +F+  ENPF +M E I L+ + NFF
Sbjct: 620 XXXXXXXXIGMNCTLMKQYIEFVADRLMLELGFSKVFR-VENPFDFM-ENISLEGKTNFF 677

Query: 121 ETRVTEYQQGAGLK 134
           E RV EYQ+   + 
Sbjct: 678 EKRVGEYQRMGVMS 691


>gi|162849254|emb|CAN10143.1| Ribonucleotide reductase small subunit [African swine fever virus
           Benin 97/1]
          Length = 327

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L   + 
Sbjct: 184 MPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFI 237

Query: 61  HETMPKG---FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKE 116
           +    K      G +     QY+++  +  C  +  + ++K   NPFP M++  ++  ++
Sbjct: 238 NYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEK 296

Query: 117 KNFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 297 TNFFELRPTQYQ 308


>gi|225850104|ref|YP_002730338.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
 gi|225645787|gb|ACO03973.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
          Length = 329

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 3/130 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKE-FQQKSRTMLHEATLLEIAY 59
           M  +    + I+ DESLHL  GI+ I  I  ENP +   E F +  +  + +A  LE+ Y
Sbjct: 199 MKNVVSGVELILIDESLHLQNGIEAILTIVEENPEIVDDEKFVENIKETIIDAVELELNY 258

Query: 60  AHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                      G++    E+YM++IA+RR  ++G +P FK  +NP  ++ +  D+KK  N
Sbjct: 259 LKTKFGGTTIFGVSYKELEKYMKYIADRRLEELGFDPQFKIDQNPLKFLQKE-DVKKLTN 317

Query: 119 FFETRVTEYQ 128
           FFE   TEY 
Sbjct: 318 FFEVSSTEYT 327


>gi|162849427|emb|CAN10392.1| Ribonucleotide reductase small subunit [African swine fever virus
           OURT 88/3]
 gi|291289488|emb|CBH29145.1| BA71V-F334L [African swine fever virus E75]
 gi|303398729|emb|CBW46710.1| F334L [African swine fever virus Georgia 2007/1]
          Length = 334

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L   + 
Sbjct: 191 MPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFI 244

Query: 61  HETMPKG---FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKE 116
           +    K      G +     QY+++  +  C  +  + ++K   NPFP M++  ++  ++
Sbjct: 245 NYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEK 303

Query: 117 KNFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 304 TNFFELRPTQYQ 315


>gi|319760602|ref|YP_004124540.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus
           Blochmannia vafer str. BVAF]
 gi|318039316|gb|ADV33866.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus
           Blochmannia vafer str. BVAF]
          Length = 376

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLWTKEF--QQKSRTMLHEATLLE 56
           M G A+  ++I RDESLHL+    ++N ++   ++P +       Q +S  +   A   E
Sbjct: 225 MEGNAKIIRFIARDESLHLSATQHILNLMQSGADDPEMAEISLMYQSESYNLFLMAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWM-SEVIDLK 114
             +AH     G  +GLN     QY+++I N R   IGL+  F    N  PW+ S ++   
Sbjct: 285 KMWAHYLFKDGSMIGLNKEILCQYIEYITNIRMQAIGLKAPFHIKANVIPWINSWLVSDN 344

Query: 115 KEKNFFETRVTEY---QQGAGLKWD 136
            +    E   + Y   Q    +  D
Sbjct: 345 VQVAPQEVESSSYLVGQINTQINDD 369


>gi|12084869|ref|NP_073334.1| ribonucleotide reductase subunit 2 [Meleagrid herpesvirus 1]
 gi|11095873|gb|AAG30080.1|AF282130_43 UL40 ribonucleotide reductase small subunit [Meleagrid herpesvirus
           1]
 gi|12025152|gb|AAG45778.1|AF291866_45 UL40 ribonucleotide reductase, small subunit [Meleagrid herpesvirus
           1]
          Length = 355

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 7/133 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H+     +             K    +  T+  EA  LE  +    
Sbjct: 229 TCQINNLISRDEAIHVEASCCIFKNYLAGP-----KPTTARIHTLFKEAVRLECEFLRTA 283

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            P+    +N  +   Y+++ A+R    + + P++   + P  +   ++      NFFE R
Sbjct: 284 APRTSNIINIDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERR 343

Query: 124 VTEYQQGAGLKWD 136
            T Y     +  D
Sbjct: 344 NTAY--SGSVSND 354


>gi|269861752|ref|XP_002650564.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220065950|gb|EED43491.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 106

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 45  SRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 104
              ++ EA  +E  +  E++P   +G+N     QY++F+A+R    +G + ++  + NPF
Sbjct: 7   IEDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPF 65

Query: 105 PWMSEVIDLKKEKNFFETRVTEYQQG 130
            +M E I L+ + NFFE R   YQ+G
Sbjct: 66  DFM-ENISLQGKTNFFERREANYQKG 90


>gi|312162814|ref|YP_003933799.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1]
 gi|308096447|gb|ADO13787.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1]
          Length = 338

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 7/128 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N      P    K    +   +  EA  +EI + H  
Sbjct: 208 TCQSNDLISRDEAIHTTASCYIYNNYLTGYP----KPSTDRIHYLFREAVEIEIRFIHSQ 263

Query: 64  MPKGFVGLNAPSCEQ---YMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P+    L+A +  Q   Y+ F A+R    I L PLF        +   ++  +K  NFF
Sbjct: 264 APRDSHILDAAALRQIDNYVHFCADRLLKMIKLPPLFDAPAPDCSFPLALMFTEKHTNFF 323

Query: 121 ETRVTEYQ 128
           E+R T Y 
Sbjct: 324 ESRSTAYA 331


>gi|188996383|ref|YP_001930634.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931450|gb|ACD66080.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 326

 Score =  115 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 3/130 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAY 59
           M  +    + I+ DESLHL  GI+ I  +  ENP +    +F +  R  + +A  LE+ Y
Sbjct: 196 MKNVVSGVELILIDESLHLQNGIEAILTMVEENPEIVDDYQFVENIRQSIIDAVELELNY 255

Query: 60  AHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                      G++    E+YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  N
Sbjct: 256 LKTKFGGTTIFGVSYGELERYMKYIADRRLIELGFDPQFGIDQNPLKFLQKE-DVKKLTN 314

Query: 119 FFETRVTEYQ 128
           FFE   TEY 
Sbjct: 315 FFEVSSTEYT 324


>gi|225849393|ref|YP_002729557.1| ribonucleoside-diphosphate reductase subunit beta
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644764|gb|ACN99814.1| ribonucleoside-diphosphate reductase, beta subunit
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 326

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 3/130 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAY 59
           M  +    + I+ DESLHL  GI+ I  +  ENP +     F +  R  + +A  LE+ Y
Sbjct: 196 MKNVVAGVELILIDESLHLQNGIEAILTMVEENPEIVDDYNFVENIRQSIIDAVELELNY 255

Query: 60  AHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                      G++    E+YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  N
Sbjct: 256 LKTKFGGTTIFGVSYNELERYMKYIADRRLVELGFDPQFGIDQNPLKFLQKE-DVKKLTN 314

Query: 119 FFETRVTEYQ 128
           FFE   TEY 
Sbjct: 315 FFEVSSTEYT 324


>gi|215275539|sp|P0C8I1|RIR2_ASFP4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L   + 
Sbjct: 184 MPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPE------ERIIHKILKEAVELVDEFI 237

Query: 61  HETMPKG---FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKE 116
           +    K      G +     QY+++  +  C  +  + ++K   NPFP M++  ++  ++
Sbjct: 238 NYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEK 296

Query: 117 KNFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 297 TNFFELRPTQYQ 308


>gi|9628152|ref|NP_042738.1| ribonucleotide reductase small subunit [African swine fever virus]
 gi|1172939|sp|P42492|RIR2_ASFB7 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|780414|gb|AAA65274.1| ribonucleotide reductase small subunit [African swine fever virus]
 gi|1097433|prf||2113434AT ribonucleotide reductase:SUBUNIT=small
          Length = 334

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L   + 
Sbjct: 191 MPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFI 244

Query: 61  HETMPKG---FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKE 116
           +    K      G +     QY+++  +  C  +  + ++K   NPFP M++  ++  ++
Sbjct: 245 NYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEK 303

Query: 117 KNFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 304 TNFFELRPTQYQ 315


>gi|215275540|sp|P0C8I2|RIR2_ASFWA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 11/132 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    ++I RDE +H +F   +I+      P       ++    +L EA  L   + 
Sbjct: 184 MPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPE------EKIIHKILKEAVELVDEFI 237

Query: 61  HETMPKG---FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSE-VIDLKKE 116
                K      G +     QY+++  +  C  +  + ++K   NPFP M++  ++  ++
Sbjct: 238 SYAFDKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYK-VGNPFPQMTKFFLNEVEK 296

Query: 117 KNFFETRVTEYQ 128
            NFFE R T+YQ
Sbjct: 297 TNFFELRPTQYQ 308


>gi|9629745|ref|NP_045237.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 4]
 gi|2605963|gb|AAC59535.1| 20 [Equid herpesvirus 4]
          Length = 320

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 4/125 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H N    + N         + K    +   +  EA  +E  +    
Sbjct: 193 TCQSNDLISRDEAIHTNASCCIYNNYLGG----FEKPAPTRIYALFSEAVNIECEFLLSH 248

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            PK    L+  +   Y+++ A+R   +IGL PLF   + P  +    + ++K  NFFE R
Sbjct: 249 APKSTHLLDIEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERR 308

Query: 124 VTEYQ 128
            T Y 
Sbjct: 309 STAYS 313


>gi|10834911|ref|NP_066872.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 3]
 gi|5102912|dbj|BAA78729.1| UL40 protein [Marek's disease virus serotype 2 MDV2]
 gi|5689312|dbj|BAA82936.1| UL40 product homolog [Marek's disease virus serotype 2 MDV2]
 gi|10800005|dbj|BAB16550.1| UL40 protein [Gallid herpesvirus 3]
          Length = 353

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 7/133 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H+     +       N     K    + + +  EA  LE A+    
Sbjct: 227 TCQINNLISRDEAIHVEASCCIFKNYIAGN-----KPSTARIQALFSEAVDLECAFLRAA 281

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            P+    L+  S   Y+++ A+R    + + P++        +   ++      NFFE R
Sbjct: 282 APRDSRLLDIGSICSYVRYSADRLLRMLDVPPIYGEPSPAADFPLSLMSASNNTNFFERR 341

Query: 124 VTEYQQGAGLKWD 136
            T Y     +  D
Sbjct: 342 STAY--SGSVSND 352


>gi|703073|gb|AAA80557.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2]
          Length = 354

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 7/133 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H+     +             K    +  T+  EA  +E  +    
Sbjct: 228 TCQINNLISRDEAIHVEASCCIFKNYLAGP-----KPTTARIHTLFKEAVTVECEFLRTA 282

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            P+    +N  +   Y+++ A+R    + + P++   + P  +   ++      NFFE R
Sbjct: 283 APRTSNIINIDAICSYVRYSADRLLRALDILPIYDEPKPPADFPLVLMSAASNTNFFERR 342

Query: 124 VTEYQQGAGLKWD 136
            T Y     +  D
Sbjct: 343 NTAY--SGSVSND 353


>gi|1710396|sp|P50644|RIR2_EHV4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|515833|emb|CAA53101.1| ribonucleoside-diphosphate reductase [Equid herpesvirus 4]
          Length = 320

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 4/125 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H N    + N         + K    +   +  EA  +E  +    
Sbjct: 193 TCQSNDLISRDEAIHTNASCCIYNNYLGG----FEKPAPTRIYALFSEAVNIECEFLLSH 248

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            PK    L+  +   Y+++ A+R   +IGL PLF   + P  +    + ++K  NFFE R
Sbjct: 249 APKSSHLLDIEAIICYVRYSADRLLGEIGLSPLFNAPKPPPSFPLAFMTVEKHTNFFERR 308

Query: 124 VTEYQ 128
            T Y 
Sbjct: 309 STAYS 313


>gi|21672460|ref|NP_660527.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
 gi|25091143|sp|Q8K9W4|RIR2_BUCAP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|21623075|gb|AAM67738.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
          Length = 376

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK----EFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N +  E  +   K    E ++++  +   A+  E
Sbjct: 225 MEGNAKIIRLIARDEALHLTGTQHILNILNNEKNNENMKNTVLECREEAIKIFISASEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
             +A      G  +GLN     QY+++I N R H IG +  F+ T NP PW++  ++
Sbjct: 285 KKWAKYLFQDGSMLGLNKDILCQYIEYITNIRMHAIGFKMPFEKTSNPIPWINSWLN 341


>gi|326536452|ref|YP_004300883.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit
           [Aeromonas phage 65]
 gi|312262798|gb|ADQ53054.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit
           [Aeromonas phage 65]
          Length = 376

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE+LHL     +I++ +   ++P +    K  + K+ ++  E    E
Sbjct: 225 MEGSAKIMKFIARDENLHLKATQTIISRWQTGKDDPEMVEIAKRLEGKAVSIFEEVVAQE 284

Query: 57  IAYAHETMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
             +A   M    + GLN      Y++++A+ R    GL   +   +NP PW+++ ++
Sbjct: 285 KEWAEYLMGDKSLNGLNRDVLCNYIEYLADNRMRSAGLPSSYAKRKNPLPWVTKWLN 341


>gi|315930891|gb|EFV09876.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 305

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 1/103 (0%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+  E   K   M  +A  LEI + 
Sbjct: 204 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWG 263

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP 103
                   +G      E+Y+ ++ ++R   I L+ L+   ++P
Sbjct: 264 KYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLYN-AKHP 305


>gi|12642668|gb|AAK00340.1| ribonucleotide reductase small subunit [Bovine herpesvirus 2]
          Length = 313

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N     +P    K    + R +  EA  +EIA+    
Sbjct: 183 TCQSNDLISRDEAVHTTASCCIYNNYIGAHP----KPPPTRVRQLFLEAVDIEIAFIRAK 238

Query: 64  MPKGFVGLNA---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           MP+    L+     S E Y++F A+R    IG +PLF        +   ++   K  NFF
Sbjct: 239 MPRDGQVLSESAVASIENYVRFSADRLLCLIGDQPLFNAPPPDANFPLRLMSTDKHTNFF 298

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 299 ECRSTAYA-GAVVND 312


>gi|330949820|gb|EGH50080.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae Cit 7]
          Length = 359

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 49/80 (61%), Positives = 64/80 (80%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW  E ++++  M+ + T LEI YA
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWDAEMKKEATQMILQGTQLEIEYA 339

Query: 61  HETMPKGFVGLNAPSCEQYM 80
            +TMP+G +G+NA   E Y+
Sbjct: 340 RDTMPRGVLGMNAAMMEDYL 359


>gi|269866968|ref|XP_002652448.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062479|gb|EED41609.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 100

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 46  RTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP 105
           + ++ EA  +E  +  E++P   +G+N     QY++F+A+R    +G + ++  + NPF 
Sbjct: 2   KDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVS-NPFD 60

Query: 106 WMSEVIDLKKEKNFFETRVTEYQQG 130
           +M E I L+ + NFFE R   YQ+G
Sbjct: 61  FM-ENISLQGKTNFFERREANYQKG 84


>gi|163784572|ref|ZP_02179421.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880158|gb|EDP73813.1| ribonucleotide-diphosphate [Hydrogenivirga sp. 128-5-R1-1]
          Length = 139

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 3/130 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK-EFQQKSRTMLHEATLLEIAY 59
           M  +    + ++ DESLHL  GI+ I  I  ENP +    +F +  R  + +A  LE+ Y
Sbjct: 9   MKNVVSGVELVLIDESLHLQNGIEAILTIIEENPEIVDDIKFVENIRDTIIDAVELELNY 68

Query: 60  AHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                      G++    E YM++IA+RR  ++G +P F   +NP  ++ +  D+KK  N
Sbjct: 69  LKTKFGGTTIFGVSYKELEMYMKYIADRRLEELGFDPQFNIQQNPLKFLQKE-DVKKLTN 127

Query: 119 FFETRVTEYQ 128
           FFE   TEY 
Sbjct: 128 FFEVSSTEYT 137


>gi|323650974|ref|YP_004243617.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. natto]
 gi|323461614|dbj|BAJ77030.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. natto]
          Length = 347

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 6/140 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G     QYI RDE  H  F   ++  I  + P L T+EF +       E   LE  + 
Sbjct: 206 MFGTGTVIQYIQRDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFC 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS----EVIDLKKE 116
            + + K    ++    ++Y+ + AN     +GL+ +F   +NP PW++    + ++   +
Sbjct: 266 ED-LYKNTPDIDIEEVKEYIGYRANLILDNLGLDQIFAAKKNPMPWITAFDPDNLN-NTK 323

Query: 117 KNFFETRVTEYQQGAGLKWD 136
           ++FFE +   Y +    K D
Sbjct: 324 RDFFEDKEVNYGKANEQKND 343


>gi|125745092|ref|YP_001033969.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 2]
 gi|327488446|sp|Q77MS0|RIR2_GAHVM RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|7673151|gb|AAF66775.1|AF147806_39 ribonucleotide reductase small subunit [Gallid herpesvirus 2]
 gi|10180745|gb|AAG14233.1|AF243438_48 UL40 ribonucleotide reductase small subunit-like protein [Gallid
           herpesvirus 2]
 gi|104304005|gb|ABF72280.1| HSV-1 UL40-like protein [Gallid herpesvirus 2]
 gi|148806369|gb|ABR13125.1| UL40 [Gallid herpesvirus 2]
 gi|194346388|gb|ACF49570.1| UL40 [synthetic construct]
 gi|194750382|gb|ACF94859.1| UL40 [Gallid herpesvirus 2]
 gi|237626230|gb|ACR02753.1| UL40 [synthetic construct]
 gi|237626404|gb|ACR02926.1| UL40 [synthetic construct]
          Length = 343

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 7/133 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H+     +          +  K    + + +  EA  +E A+    
Sbjct: 217 TCQINNLISRDEAIHVEASCCIFKNYL-----MGPKPSIGRVQELFKEAVQIECAFLRTA 271

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            P+    L+  +   Y+++ A+R   ++ + P++   +    +   ++      NFFE R
Sbjct: 272 APRNSQLLDVEAICSYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERR 331

Query: 124 VTEYQQGAGLKWD 136
            T Y     +  D
Sbjct: 332 NTAY--SGSVSND 342


>gi|221316490|ref|ZP_03598295.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
          Length = 347

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 6/140 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G     QYI RDE  H  F   ++  I  + P L T+EF +       E   LE  + 
Sbjct: 206 MFGTGTVIQYIQRDEMKHSYFQTILVRDILTQYPELNTEEFSEFVYDFFTELVQLEREFC 265

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS----EVIDLKKE 116
            + + K    ++    ++Y+ + AN     +GL+ +F   +NP PW++    + ++   +
Sbjct: 266 ED-LYKNTPDIDIEEVKEYIGYRANLILDNLGLDQIFSAKKNPMPWITAFDPDNLN-NTK 323

Query: 117 KNFFETRVTEYQQGAGLKWD 136
           ++FFE +   Y +    K D
Sbjct: 324 RDFFEDKEVNYGKANEQKND 343


>gi|124487872|gb|ABN12019.1| putative ribonucleotide reductase R2 subunit [Maconellicoccus
           hirsutus]
          Length = 249

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I + ESL+ +F   +  ++         +   ++   ++ EA ++E  ++
Sbjct: 113 MPGLTLSNELIRKGESLYTDFACLLFKRLVQ-------RPSVEEITEIIREAVIIEQEFS 165

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
            + +P   +G++      Y++F+A+R    +    +F    NPF +M 
Sbjct: 166 TKGLPVSLIGMDCELMTTYIEFVADRLLQALNCPKVF-GVPNPFGFME 212


>gi|216905873|ref|YP_002333501.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 9]
 gi|216410027|dbj|BAH02445.1| small subunit of ribonucleotide reductase [Equid herpesvirus 9]
          Length = 321

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 4/125 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N         + K   ++   +  EA  +E  +    
Sbjct: 194 TCQSNDLISRDEAIHTRASCCIYNNYLGG----FEKPEPKRIYELFSEAVNIECEFLLSH 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            P+    L+      Y+++ A+R   +IGL PLF   +    +    + ++K  NFFE R
Sbjct: 250 APQNSHLLDIGEIISYVRYSADRLLGEIGLSPLFNAPKPSTSFPLAFMTVEKHTNFFERR 309

Query: 124 VTEYQ 128
            T Y 
Sbjct: 310 STAYS 314


>gi|41387638|gb|AAS01682.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2]
          Length = 343

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 7/133 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H+     +          +  K    + + +  EA  +E A+    
Sbjct: 217 TCQINNLISRDEAIHVEASCCIFKNYL-----MGPKPSIGRVQELFKEAVQIECAFLRTA 271

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            P     L+  +   Y+++ A+R   ++ + P++   +    +   ++      NFFE R
Sbjct: 272 APHNSQLLDVEAICSYVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERR 331

Query: 124 VTEYQQGAGLKWD 136
            T Y     +  D
Sbjct: 332 NTAY--SGSVSND 342


>gi|296316020|ref|YP_003662484.1| ribonucleotide reductase subunit 2 [Bovine herpesvirus 5]
 gi|40456143|gb|AAR86121.1| UL40 ribonucleotide reductase small subunit [Bovine herpesvirus 5]
          Length = 315

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 6/132 (4%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           +    + R +  EA  +E  +    
Sbjct: 189 TCQTNDLISRDEAVHTTASCCIFNNYLGGE-----RPPPDRVRKLFREAVEIEREFIWSR 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            P+G   L+  +   Y+++ A+R    I L PLF        +   ++  +K  NFFE R
Sbjct: 244 APRGSHILDVEAISAYVEYSADRLLAAIHLPPLFGTPPPGTDFPLALMTAEKHTNFFERR 303

Query: 124 VTEYQQGAGLKW 135
            T Y  G  +  
Sbjct: 304 STTY-TGTVIND 314


>gi|126658748|ref|ZP_01729893.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
 gi|126620010|gb|EAZ90734.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
          Length = 347

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 9/138 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G A+  + I  DE  H++    +I +   +  +      + +   + H     EI + + 
Sbjct: 211 GCAKLIKQINMDELTHVSLYQKLITEATTKFSY-----SEDEITELFHTTVEREIEWTNH 265

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKKEKNF 119
                 +G++  S E Y +++AN R   IG+  ++   ENP     W       K +  F
Sbjct: 266 IFDGQILGVSKASTEAYTKYLANLRLKAIGIPAIYPKIENPYAHLDWADFKGIGKSKAAF 325

Query: 120 FETRVTEYQQGAGLK-WD 136
           FET VT Y Q   +K WD
Sbjct: 326 FETEVTGYAQPTAVKGWD 343


>gi|50313261|ref|YP_053065.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 1]
 gi|132625|sp|P28847|RIR2_EHV1B RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|42795147|gb|AAS45904.1| small subunit of ribonucleotide reductase [Equid herpesvirus 1]
 gi|49617004|gb|AAT67277.1| ribonucleotide reductase RR2 [Equid herpesvirus 1]
          Length = 321

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 4/125 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N         + K   ++   +  EA  +E  +    
Sbjct: 194 TCQSNDLISRDEAIHTRASCCIYNNYLGG----FEKPEPKRIYELFSEAVNIECEFLLSH 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            P+    L+  +   Y+++ A+R   +IGL PLF   +    +    + ++K  NFFE R
Sbjct: 250 APQYSHLLDIGAIISYVRYSADRLLGEIGLSPLFNAPKPSPSFPLAFMTVEKHTNFFERR 309

Query: 124 VTEYQ 128
            T Y 
Sbjct: 310 STAYS 314


>gi|170587050|ref|XP_001898292.1| ribonucleotide reductase 2 [Brugia malayi]
 gi|158594687|gb|EDP33271.1| ribonucleotide reductase 2, putative [Brugia malayi]
          Length = 288

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 62/133 (46%), Gaps = 15/133 (11%)

Query: 15  ESLHLNFGIDVINQIKIENPHLWTKEF-------------QQKSRTMLHEATLLEIAYAH 61
           E++H      +I+    +      ++F              +K  +M +     +  Y  
Sbjct: 145 ENIHSEMYSKMIDTYIRDQKQKKFRKFCVTLCFLEINLSNYKKFTSMFNACIDAKQEYLT 204

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
           E +P   +G+N     QY++++A+    ++    ++ +++NPF +M E I ++ + NFFE
Sbjct: 205 EALPVDLIGINCKLMCQYIEYVADHLLTELHCAKIY-HSDNPFDFM-ERISIEAKTNFFE 262

Query: 122 TRVTEYQQGAGLK 134
            RV+EYQ+   L 
Sbjct: 263 KRVSEYQKAGVLS 275


>gi|294955280|ref|XP_002788462.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
 gi|239903931|gb|EER20258.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
          Length = 157

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 52  ATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
           A  +E  +  + +P G +G+NA    +Y++F+A+R    +G   ++    NPF WM+ +I
Sbjct: 38  AVNVEREFITDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIYNSA-NPFDWMT-MI 95

Query: 112 DLKKEKNFFETRVT 125
            L+ + NFFE RV 
Sbjct: 96  SLQGKTNFFEKRVG 109


>gi|70921511|ref|XP_734071.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56506464|emb|CAH78308.1| hypothetical protein PC000956.02.0 [Plasmodium chabaudi chabaudi]
          Length = 87

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 2/77 (2%)

Query: 59  YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
           +   ++P   +G+N+    QY++F+A+R    +G   +F +++NPF WM  +I L+ + N
Sbjct: 1   FLVWSLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWMD-LISLQGKTN 58

Query: 119 FFETRVTEYQQGAGLKW 135
           FFE RV +YQ+   +  
Sbjct: 59  FFEKRVADYQKSGVMAQ 75


>gi|330949821|gb|EGH50081.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae Cit 7]
          Length = 65

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 48/65 (73%)

Query: 72  NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGA 131
           N    E Y++FIANRR  QIGL+  +  T NPFPWMSE++DLKKEKNFFETRV EYQ G 
Sbjct: 1   NGAGMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGG 60

Query: 132 GLKWD 136
            L WD
Sbjct: 61  ALSWD 65


>gi|311977695|ref|YP_003986815.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
           polyphaga mimivirus]
 gi|77416594|sp|Q7T6Y9|RIR2_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|55664859|gb|AAQ09571.2| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
           mimivirus]
 gi|308204332|gb|ADO18133.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
           polyphaga mimivirus]
          Length = 417

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 63/130 (48%), Gaps = 9/130 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    Q+I RDE+ H+     + + +         +  +     ++ EA  +E  + 
Sbjct: 283 MPGLIISNQFIARDENKHVELACIMYSLL-------NNRLKESVVYQIIDEAIEIEEEFI 335

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           ++++P   +G+N+    QY++++A+R    +G    F   +NPF +M + ID+  + NFF
Sbjct: 336 NDSLPCKLLGMNSELMSQYIKYVADRLLVDLGYRKKFN-VDNPFEYMKK-IDVFVKANFF 393

Query: 121 ETRVTEYQQG 130
           E R   Y   
Sbjct: 394 EKRNDAYSNA 403


>gi|59912|emb|CAA24930.1| unnamed protein product [Human herpesvirus 2]
          Length = 337

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N    +      K    +   +  EA  +EI +    
Sbjct: 207 TCQSNDLISRDEAVHTTASCYIYNNYLGD----HAKPEAARVYRLFREAVDIEIGFIRSQ 262

Query: 64  MPKGFVGLNA---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+     + E Y++F A+R    I ++PL+        +   ++   K  NFF
Sbjct: 263 APTDSSILSPGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFF 322

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 323 ECRSTSYA-GAVVND 336


>gi|172054963|ref|YP_001806290.1| ribonucleoside-diphosphate reductase subunit beta [Cyanothece sp.
           ATCC 51142]
 gi|171701244|gb|ACB54224.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
          Length = 347

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 8/135 (5%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G A+  + I  DE  H++    +I + K +  +      + +   +       EI + + 
Sbjct: 211 GCAKLIKQINMDELTHVSLYQKLITEAKTKFSY-----SEDEITELFVNTVEKEIEWTNH 265

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP---FPWMSEVIDLKKEKNF 119
                 +G++  S E Y +++AN R   IG+  ++   ENP     W       K +  F
Sbjct: 266 IFDGQILGVSEASTEAYTKYLANLRLKAIGISAIYPEVENPYAHLDWADFKGIGKSKAAF 325

Query: 120 FETRVTEYQQGAGLK 134
           FET VT Y Q   +K
Sbjct: 326 FETEVTGYAQPTAVK 340


>gi|190896442|gb|ACE96734.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896490|gb|ACE96758.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 7/81 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ EA  +E  + 
Sbjct: 140 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKEAVEIEREFV 192

Query: 61  HETMPKGFVGLNAPSCEQYMQ 81
            +++P   VG+N     QY++
Sbjct: 193 VDSLPCALVGMNGELMSQYIE 213


>gi|190896432|gb|ACE96729.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896434|gb|ACE96730.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896436|gb|ACE96731.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896438|gb|ACE96732.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896440|gb|ACE96733.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896444|gb|ACE96735.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896446|gb|ACE96736.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896448|gb|ACE96737.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896450|gb|ACE96738.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896452|gb|ACE96739.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896454|gb|ACE96740.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896456|gb|ACE96741.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896458|gb|ACE96742.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896460|gb|ACE96743.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896462|gb|ACE96744.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896464|gb|ACE96745.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896466|gb|ACE96746.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896468|gb|ACE96747.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896470|gb|ACE96748.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896472|gb|ACE96749.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896474|gb|ACE96750.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896476|gb|ACE96751.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896478|gb|ACE96752.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896482|gb|ACE96754.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896484|gb|ACE96755.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896486|gb|ACE96756.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896488|gb|ACE96757.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896492|gb|ACE96759.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896494|gb|ACE96760.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896496|gb|ACE96761.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896498|gb|ACE96762.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896500|gb|ACE96763.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896502|gb|ACE96764.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896504|gb|ACE96765.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896506|gb|ACE96766.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 7/81 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++        K  +++ + ++ EA  +E  + 
Sbjct: 140 MPGLTFSNELISRDEGLHCDFACLLYSLLRK-------KLSEERVKGIVKEAVEIEREFV 192

Query: 61  HETMPKGFVGLNAPSCEQYMQ 81
            +++P   VG+N     QY++
Sbjct: 193 VDSLPCALVGMNGELMSQYIE 213


>gi|34419511|ref|NP_899524.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio
           phage KVP40]
 gi|34333192|gb|AAQ64347.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio
           phage KVP40]
          Length = 374

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLWTKEF--QQKSRTMLHEATLLE 56
           M G A+  + I RDE LHL     +I+  +   ++P +       Q ++  +  +    E
Sbjct: 223 MEGNAKVMKLIARDEQLHLKGTQALISIWQNYKDDPEMAEISLRLQPEAEKIFMQVVDQE 282

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
             +AH    +G   GLNA    +Y++++A+ R   +GL   +   ++P PW+ + ++
Sbjct: 283 KEWAHSLFSQGTVPGLNAQILCEYVEYLADSRMRSVGLNSPYPRRKHPLPWIRKWLN 339


>gi|295698298|ref|YP_003602953.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Riesia pediculicola USDA]
 gi|291156973|gb|ADD79418.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Riesia pediculicola USDA]
          Length = 375

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LH+     +IN ++   E+  +   +KE     + +    +  E
Sbjct: 224 MEGNAKIIKLIARDEALHVTGTQHMINIMQSSKEDKEMIEISKECLMICQKIFLNVSDQE 283

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLK 114
             +A      G  +GLN    ++Y+ +I   R   IGL+       NP PW++  +    
Sbjct: 284 KRWADYLFSNGNLIGLNKKILKEYIDYITEVRMRAIGLKKDLIKKINPIPWINAWLSSDN 343

Query: 115 KEKNFFETRVTEY 127
            +    ET V+ Y
Sbjct: 344 IQSAPQETEVSSY 356


>gi|15079087|ref|NP_149839.1| 376L [Invertebrate iridescent virus 6]
 gi|82012049|sp|Q91FE8|RIR2_IIV6 RecName: Full=Probable ribonucleoside-diphosphate reductase small
           subunit 376L; AltName: Full=Ribonucleotide reductase
           small subunit
 gi|15042456|gb|AAK82236.1|AF303741_377 376L [Invertebrate iridescent virus 6]
          Length = 360

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLE 56
           M G+ +   + + DE+ H    I++      EN            Q+    +  E   LE
Sbjct: 192 MKGMGQIVTWSIVDETQHTEGMIELFKVFVEENKTGDQPIRPSVLQETVYKIAKEMVGLE 251

Query: 57  IAYAHETMPK------------------GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 98
            A+      K                   F GL     + Y+++IA+RR + +G + +F 
Sbjct: 252 EAFIDLVFKKYKDEPINDDNDLETKDNKDFFGLTPQRLKAYIKYIADRRLNLMGYKSIFN 311

Query: 99  ---YTENPFPWMSEVIDLKKEKNFFETRVTEYQ 128
              Y  NP P +  +I+     NFFE R T+Y 
Sbjct: 312 LEPYPTNPLPELEIMINAPTHTNFFENRSTDYA 344


>gi|83722609|ref|YP_443887.1| ribonucleotide reductase subunit 2 [Papiine herpesvirus 2]
 gi|75905762|gb|ABA29294.1| UL40 [Papiine herpesvirus 2]
          Length = 339

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N     +     K   ++   +  EA  +EI +    
Sbjct: 209 TCQSNDLISRDEAVHTTASCYIYNNYLAGHR----KPEPERVYRLFREAVEIEIGFIRSQ 264

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+A +    E Y++F A+R    I ++PLF        +   ++  +K  NFF
Sbjct: 265 APADSRILDAAALAAIENYVRFSADRLLALIEMKPLFGAPAPAPSFPLNLMSTEKHTNFF 324

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 325 ERRSTAYA-GAVVND 338


>gi|297724673|ref|NP_001174700.1| Os06g0257450 [Oryza sativa Japonica Group]
 gi|255676900|dbj|BAH93428.1| Os06g0257450 [Oryza sativa Japonica Group]
          Length = 162

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 130
           +N     QY++F+A+R    +G + ++    NPF WM E+I L+ + NFFE RV +YQ+ 
Sbjct: 83  MNGDLMSQYIEFVADRLLMALGCKKMYNVA-NPFDWM-ELISLQGKTNFFEKRVGDYQKA 140

Query: 131 AGLK 134
           + + 
Sbjct: 141 SVMS 144


>gi|30984468|ref|NP_851900.1| ribonucleotide reductase subunit 2 [Macacine herpesvirus 1]
 gi|28804676|dbj|BAC58080.1| ribonucleotide reductase small subunit [Cercopithecine herpesvirus
           1]
 gi|30844282|gb|AAP41458.1| small subunit of ribonucleotide reductase [Macacine herpesvirus 1]
          Length = 338

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N     +     K   ++   +  EA  +EI +    
Sbjct: 208 TCQSNDLISRDEAVHTTASCYIYNNYLGGHR----KPTAERVYRLFREAVDIEIGFIRSQ 263

Query: 64  MPKGFVGLNA---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+A    + E Y++F A+R    I ++PLF        +   ++  +K  NFF
Sbjct: 264 APANSRVLDAAALDAIENYVRFSADRLLVLIKMKPLFGAPAPAPSFPLSLMSTEKHTNFF 323

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 324 ECRSTAYA-GAVVND 337


>gi|56694763|ref|YP_164483.1| ribonucleotide reductase subunit 2 [Cercopithecine herpesvirus 2]
 gi|52843315|gb|AAU88106.1| small subunit of ribonucleotide reductase [Cercopithecine
           herpesvirus 2]
          Length = 325

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K   ++   +  EA  +EI +    
Sbjct: 195 TCQSNDLISRDEAVHTTASCYIYNNYLAG----HHKPEPERVYRLFREAVEIEIGFIRSQ 250

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+A +    E Y++F A+R    I ++PLF        +   ++  +K  NFF
Sbjct: 251 APADSRILDAAALAAIENYVRFSADRLLALIRMKPLFGAPAPAPSFPLSLMSTEKHTNFF 310

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 311 ECRSTAYA-GAVVND 324


>gi|290766061|gb|ADD60039.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
          Length = 340

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 210 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 265

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 266 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 325

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 326 ECRSTSYA-GAVVND 339


>gi|222478371|gb|ACM62263.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
          Length = 340

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 210 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 265

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 266 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 325

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 326 ECRSTSYA-GAVVND 339


>gi|114318828|gb|ABI63502.1| UL40 [Human herpesvirus 1]
 gi|290766139|gb|ADD60116.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
          Length = 340

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 210 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 265

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 266 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 325

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 326 ECRSTSYA-GAVVND 339


>gi|1172944|sp|P06474|RIR2_HHV1K RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|807641|gb|AAA66436.1| unknown protein [Human herpesvirus 1]
          Length = 340

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 210 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 265

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 266 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 325

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 326 ECRSTSYA-GAVVND 339


>gi|190896480|gb|ACE96753.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 7/81 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ +          ++ + ++ EA  +E  + 
Sbjct: 140 MPGLTFSNELISRDEGLHCDFACLLYSLLRKKLGE-------ERVKGIVKEAVEIEREFV 192

Query: 61  HETMPKGFVGLNAPSCEQYMQ 81
            +++P   VG+N     QY++
Sbjct: 193 VDSLPCALVGMNGELMSQYIE 213


>gi|9629421|ref|NP_044642.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
 gi|132622|sp|P10224|RIR2_HHV11 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           Short=R2; AltName: Full=Ribonucleotide reductase 38 kDa
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit; Flags: Precursor
 gi|59540|emb|CAA32303.1| ribonucleotide reductase small subunit [Human herpesvirus 1]
          Length = 340

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 210 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 265

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 266 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 325

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 326 ECRSTSYA-GAVVND 339


>gi|148688625|gb|EDL20572.1| mCG1032193 [Mus musculus]
          Length = 150

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +Q+ + ++  A  +E  + 
Sbjct: 53  MPGLTFSNELISRDEGLHWDFACLMFK-------HLAHKPSEQRVKEIITTAVRIEQEFL 105

Query: 61  HETMPKGFVGLNAPSCEQYM 80
            E +P   +G++    +QY+
Sbjct: 106 TEALPVKLIGMSCTLMKQYI 125


>gi|9629310|ref|NP_044510.1| ribonucleotide reductase subunit 2 [Human herpesvirus 2]
 gi|61231410|sp|P69520|RIR2_HHV23 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|61231418|sp|P69521|RIR2_HHV2H RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           Short=R2; AltName: Full=Ribonucleotide reductase 38 kDa
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|330200|gb|AAA45807.1| 38K protein [Human herpesvirus 2]
 gi|1869863|emb|CAB06726.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
 gi|224613173|dbj|BAH24264.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
 gi|224613175|dbj|BAH24265.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
          Length = 337

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  EA  +EI +    
Sbjct: 207 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPEAARVYRLFREAVDIEIGFIRSQ 262

Query: 64  MPKGFVGLNA---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+     + E Y++F A+R    I ++PL+        +   ++   K  NFF
Sbjct: 263 APTDSSILSPGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFF 322

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 323 ECRSTSYA-GAVVND 336


>gi|270339459|ref|YP_003331539.1| ribonucleotide reductase subunit 2 [Felid herpesvirus 1]
 gi|254940175|gb|ACT88318.1| ribonucleotide reductase subunit 2 [Felid herpesvirus 1]
          Length = 331

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K   ++  ++  EA  LE  +    
Sbjct: 204 TCQTNDLISRDEAIHTTASCCIYNNYLP----AQIKPSTERIHSLFREAVELECEFISTC 259

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            P+    LN      Y+++ A+R    I + P+F        +    + ++K  NFFE  
Sbjct: 260 APRCSNLLNVADICNYVRYSADRLLGIIKVAPIFNVPPPHPDFPLAFMVIEKHTNFFERH 319

Query: 124 VTEYQQGAGLKW 135
            T Y  G  +  
Sbjct: 320 STTYS-GTVIND 330


>gi|30960831|gb|AAP39226.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score =  105 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K   ++   +  +A  +EI +    
Sbjct: 177 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPERVYGLFRQAVEIEIGFIRSQ 232

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 233 APTDSHILSPAALVAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 292

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 293 ECRSTSYA-GAVVND 306


>gi|30960813|gb|AAP39214.1| UL40 [Human herpesvirus 1]
 gi|30960819|gb|AAP39218.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score =  105 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K   ++   +  +A  +EI +    
Sbjct: 177 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPERVYGLFRQAVEIEIGFIRSQ 232

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 233 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 292

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 293 ECRSTSYA-GAVVND 306


>gi|30960429|gb|AAP38958.1| UL40 [Human herpesvirus 1]
 gi|30960468|gb|AAP38984.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 177 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 232

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 233 APTDSHILSPAALVAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 292

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 293 ECRSTSYA-GAVVND 306


>gi|30960231|gb|AAP38826.1| UL40 [Human herpesvirus 1]
 gi|30960234|gb|AAP38828.1| UL40 [Human herpesvirus 1]
 gi|30960237|gb|AAP38830.1| UL40 [Human herpesvirus 1]
 gi|30960240|gb|AAP38832.1| UL40 [Human herpesvirus 1]
 gi|30960243|gb|AAP38834.1| UL40 [Human herpesvirus 1]
 gi|30960246|gb|AAP38836.1| UL40 [Human herpesvirus 1]
 gi|30960249|gb|AAP38838.1| UL40 [Human herpesvirus 1]
 gi|30960252|gb|AAP38840.1| UL40 [Human herpesvirus 1]
 gi|30960255|gb|AAP38842.1| UL40 [Human herpesvirus 1]
 gi|30960258|gb|AAP38844.1| UL40 [Human herpesvirus 1]
 gi|30960261|gb|AAP38846.1| UL40 [Human herpesvirus 1]
 gi|30960264|gb|AAP38848.1| UL40 [Human herpesvirus 1]
 gi|30960267|gb|AAP38850.1| UL40 [Human herpesvirus 1]
 gi|30960270|gb|AAP38852.1| UL40 [Human herpesvirus 1]
 gi|30960273|gb|AAP38854.1| UL40 [Human herpesvirus 1]
 gi|30960276|gb|AAP38856.1| UL40 [Human herpesvirus 1]
 gi|30960279|gb|AAP38858.1| UL40 [Human herpesvirus 1]
 gi|30960282|gb|AAP38860.1| UL40 [Human herpesvirus 1]
 gi|30960285|gb|AAP38862.1| UL40 [Human herpesvirus 1]
 gi|30960288|gb|AAP38864.1| UL40 [Human herpesvirus 1]
 gi|30960291|gb|AAP38866.1| UL40 [Human herpesvirus 1]
 gi|30960294|gb|AAP38868.1| UL40 [Human herpesvirus 1]
 gi|30960297|gb|AAP38870.1| UL40 [Human herpesvirus 1]
 gi|30960300|gb|AAP38872.1| UL40 [Human herpesvirus 1]
 gi|30960303|gb|AAP38874.1| UL40 [Human herpesvirus 1]
 gi|30960306|gb|AAP38876.1| UL40 [Human herpesvirus 1]
 gi|30960309|gb|AAP38878.1| UL40 [Human herpesvirus 1]
 gi|30960312|gb|AAP38880.1| UL40 [Human herpesvirus 1]
 gi|30960315|gb|AAP38882.1| UL40 [Human herpesvirus 1]
 gi|30960318|gb|AAP38884.1| UL40 [Human herpesvirus 1]
 gi|30960321|gb|AAP38886.1| UL40 [Human herpesvirus 1]
 gi|30960324|gb|AAP38888.1| UL40 [Human herpesvirus 1]
 gi|30960327|gb|AAP38890.1| UL40 [Human herpesvirus 1]
 gi|30960330|gb|AAP38892.1| UL40 [Human herpesvirus 1]
 gi|30960333|gb|AAP38894.1| UL40 [Human herpesvirus 1]
 gi|30960336|gb|AAP38896.1| UL40 [Human herpesvirus 1]
 gi|30960339|gb|AAP38898.1| UL40 [Human herpesvirus 1]
 gi|30960342|gb|AAP38900.1| UL40 [Human herpesvirus 1]
 gi|30960345|gb|AAP38902.1| UL40 [Human herpesvirus 1]
 gi|30960348|gb|AAP38904.1| UL40 [Human herpesvirus 1]
 gi|30960351|gb|AAP38906.1| UL40 [Human herpesvirus 1]
 gi|30960354|gb|AAP38908.1| UL40 [Human herpesvirus 1]
 gi|30960357|gb|AAP38910.1| UL40 [Human herpesvirus 1]
 gi|30960360|gb|AAP38912.1| UL40 [Human herpesvirus 1]
 gi|30960363|gb|AAP38914.1| UL40 [Human herpesvirus 1]
 gi|30960366|gb|AAP38916.1| UL40 [Human herpesvirus 1]
 gi|30960369|gb|AAP38918.1| UL40 [Human herpesvirus 1]
 gi|30960372|gb|AAP38920.1| UL40 [Human herpesvirus 1]
 gi|30960375|gb|AAP38922.1| UL40 [Human herpesvirus 1]
 gi|30960378|gb|AAP38924.1| UL40 [Human herpesvirus 1]
 gi|30960381|gb|AAP38926.1| UL40 [Human herpesvirus 1]
 gi|30960384|gb|AAP38928.1| UL40 [Human herpesvirus 1]
 gi|30960387|gb|AAP38930.1| UL40 [Human herpesvirus 1]
 gi|30960390|gb|AAP38932.1| UL40 [Human herpesvirus 1]
 gi|30960393|gb|AAP38934.1| UL40 [Human herpesvirus 1]
 gi|30960396|gb|AAP38936.1| UL40 [Human herpesvirus 1]
 gi|30960399|gb|AAP38938.1| UL40 [Human herpesvirus 1]
 gi|30960402|gb|AAP38940.1| UL40 [Human herpesvirus 1]
 gi|30960405|gb|AAP38942.1| UL40 [Human herpesvirus 1]
 gi|30960408|gb|AAP38944.1| UL40 [Human herpesvirus 1]
 gi|30960411|gb|AAP38946.1| UL40 [Human herpesvirus 1]
 gi|30960414|gb|AAP38948.1| UL40 [Human herpesvirus 1]
 gi|30960417|gb|AAP38950.1| UL40 [Human herpesvirus 1]
 gi|30960432|gb|AAP38960.1| UL40 [Human herpesvirus 1]
 gi|30960435|gb|AAP38962.1| UL40 [Human herpesvirus 1]
 gi|30960438|gb|AAP38964.1| UL40 [Human herpesvirus 1]
 gi|30960441|gb|AAP38966.1| UL40 [Human herpesvirus 1]
 gi|30960444|gb|AAP38968.1| UL40 [Human herpesvirus 1]
 gi|30960447|gb|AAP38970.1| UL40 [Human herpesvirus 1]
 gi|30960450|gb|AAP38972.1| UL40 [Human herpesvirus 1]
 gi|30960453|gb|AAP38974.1| UL40 [Human herpesvirus 1]
 gi|30960456|gb|AAP38976.1| UL40 [Human herpesvirus 1]
 gi|30960459|gb|AAP38978.1| UL40 [Human herpesvirus 1]
 gi|30960462|gb|AAP38980.1| UL40 [Human herpesvirus 1]
 gi|30960471|gb|AAP38986.1| UL40 [Human herpesvirus 1]
 gi|30960474|gb|AAP38988.1| UL40 [Human herpesvirus 1]
 gi|30960477|gb|AAP38990.1| UL40 [Human herpesvirus 1]
 gi|30960480|gb|AAP38992.1| UL40 [Human herpesvirus 1]
 gi|30960483|gb|AAP38994.1| UL40 [Human herpesvirus 1]
 gi|30960486|gb|AAP38996.1| UL40 [Human herpesvirus 1]
 gi|30960489|gb|AAP38998.1| UL40 [Human herpesvirus 1]
 gi|30960495|gb|AAP39002.1| UL40 [Human herpesvirus 1]
 gi|30960498|gb|AAP39004.1| UL40 [Human herpesvirus 1]
 gi|30960501|gb|AAP39006.1| UL40 [Human herpesvirus 1]
 gi|30960504|gb|AAP39008.1| UL40 [Human herpesvirus 1]
 gi|30960507|gb|AAP39010.1| UL40 [Human herpesvirus 1]
 gi|30960510|gb|AAP39012.1| UL40 [Human herpesvirus 1]
 gi|30960513|gb|AAP39014.1| UL40 [Human herpesvirus 1]
 gi|30960516|gb|AAP39016.1| UL40 [Human herpesvirus 1]
 gi|30960519|gb|AAP39018.1| UL40 [Human herpesvirus 1]
 gi|30960522|gb|AAP39020.1| UL40 [Human herpesvirus 1]
 gi|30960528|gb|AAP39024.1| UL40 [Human herpesvirus 1]
 gi|30960531|gb|AAP39026.1| UL40 [Human herpesvirus 1]
 gi|30960534|gb|AAP39028.1| UL40 [Human herpesvirus 1]
 gi|30960537|gb|AAP39030.1| UL40 [Human herpesvirus 1]
 gi|30960540|gb|AAP39032.1| UL40 [Human herpesvirus 1]
 gi|30960543|gb|AAP39034.1| UL40 [Human herpesvirus 1]
 gi|30960546|gb|AAP39036.1| UL40 [Human herpesvirus 1]
 gi|30960549|gb|AAP39038.1| UL40 [Human herpesvirus 1]
 gi|30960552|gb|AAP39040.1| UL40 [Human herpesvirus 1]
 gi|30960555|gb|AAP39042.1| UL40 [Human herpesvirus 1]
 gi|30960558|gb|AAP39044.1| UL40 [Human herpesvirus 1]
 gi|30960561|gb|AAP39046.1| UL40 [Human herpesvirus 1]
 gi|30960564|gb|AAP39048.1| UL40 [Human herpesvirus 1]
 gi|30960567|gb|AAP39050.1| UL40 [Human herpesvirus 1]
 gi|30960570|gb|AAP39052.1| UL40 [Human herpesvirus 1]
 gi|30960573|gb|AAP39054.1| UL40 [Human herpesvirus 1]
 gi|30960576|gb|AAP39056.1| UL40 [Human herpesvirus 1]
 gi|30960579|gb|AAP39058.1| UL40 [Human herpesvirus 1]
 gi|30960582|gb|AAP39060.1| UL40 [Human herpesvirus 1]
 gi|30960585|gb|AAP39062.1| UL40 [Human herpesvirus 1]
 gi|30960588|gb|AAP39064.1| UL40 [Human herpesvirus 1]
 gi|30960591|gb|AAP39066.1| UL40 [Human herpesvirus 1]
 gi|30960594|gb|AAP39068.1| UL40 [Human herpesvirus 1]
 gi|30960597|gb|AAP39070.1| UL40 [Human herpesvirus 1]
 gi|30960600|gb|AAP39072.1| UL40 [Human herpesvirus 1]
 gi|30960603|gb|AAP39074.1| UL40 [Human herpesvirus 1]
 gi|30960606|gb|AAP39076.1| UL40 [Human herpesvirus 1]
 gi|30960609|gb|AAP39078.1| UL40 [Human herpesvirus 1]
 gi|30960612|gb|AAP39080.1| UL40 [Human herpesvirus 1]
 gi|30960615|gb|AAP39082.1| UL40 [Human herpesvirus 1]
 gi|30960618|gb|AAP39084.1| UL40 [Human herpesvirus 1]
 gi|30960621|gb|AAP39086.1| UL40 [Human herpesvirus 1]
 gi|30960624|gb|AAP39088.1| UL40 [Human herpesvirus 1]
 gi|30960627|gb|AAP39090.1| UL40 [Human herpesvirus 1]
 gi|30960630|gb|AAP39092.1| UL40 [Human herpesvirus 1]
 gi|30960633|gb|AAP39094.1| UL40 [Human herpesvirus 1]
 gi|30960636|gb|AAP39096.1| UL40 [Human herpesvirus 1]
 gi|30960639|gb|AAP39098.1| UL40 [Human herpesvirus 1]
 gi|30960642|gb|AAP39100.1| UL40 [Human herpesvirus 1]
 gi|30960645|gb|AAP39102.1| UL40 [Human herpesvirus 1]
 gi|30960648|gb|AAP39104.1| UL40 [Human herpesvirus 1]
 gi|30960651|gb|AAP39106.1| UL40 [Human herpesvirus 1]
 gi|30960657|gb|AAP39110.1| UL40 [Human herpesvirus 1]
 gi|30960660|gb|AAP39112.1| UL40 [Human herpesvirus 1]
 gi|30960663|gb|AAP39114.1| UL40 [Human herpesvirus 1]
 gi|30960666|gb|AAP39116.1| UL40 [Human herpesvirus 1]
 gi|30960669|gb|AAP39118.1| UL40 [Human herpesvirus 1]
 gi|30960672|gb|AAP39120.1| UL40 [Human herpesvirus 1]
 gi|30960675|gb|AAP39122.1| UL40 [Human herpesvirus 1]
 gi|30960678|gb|AAP39124.1| UL40 [Human herpesvirus 1]
 gi|30960681|gb|AAP39126.1| UL40 [Human herpesvirus 1]
 gi|30960684|gb|AAP39128.1| UL40 [Human herpesvirus 1]
 gi|30960687|gb|AAP39130.1| UL40 [Human herpesvirus 1]
 gi|30960690|gb|AAP39132.1| UL40 [Human herpesvirus 1]
 gi|30960693|gb|AAP39134.1| UL40 [Human herpesvirus 1]
 gi|30960696|gb|AAP39136.1| UL40 [Human herpesvirus 1]
 gi|30960699|gb|AAP39138.1| UL40 [Human herpesvirus 1]
 gi|30960702|gb|AAP39140.1| UL40 [Human herpesvirus 1]
 gi|30960711|gb|AAP39146.1| UL40 [Human herpesvirus 1]
 gi|30960714|gb|AAP39148.1| UL40 [Human herpesvirus 1]
 gi|30960717|gb|AAP39150.1| UL40 [Human herpesvirus 1]
 gi|30960720|gb|AAP39152.1| UL40 [Human herpesvirus 1]
 gi|30960723|gb|AAP39154.1| UL40 [Human herpesvirus 1]
 gi|30960726|gb|AAP39156.1| UL40 [Human herpesvirus 1]
 gi|30960732|gb|AAP39160.1| UL40 [Human herpesvirus 1]
 gi|30960735|gb|AAP39162.1| UL40 [Human herpesvirus 1]
 gi|30960738|gb|AAP39164.1| UL40 [Human herpesvirus 1]
 gi|30960741|gb|AAP39166.1| UL40 [Human herpesvirus 1]
 gi|30960744|gb|AAP39168.1| UL40 [Human herpesvirus 1]
 gi|30960747|gb|AAP39170.1| UL40 [Human herpesvirus 1]
 gi|30960750|gb|AAP39172.1| UL40 [Human herpesvirus 1]
 gi|30960756|gb|AAP39176.1| UL40 [Human herpesvirus 1]
 gi|30960759|gb|AAP39178.1| UL40 [Human herpesvirus 1]
 gi|30960762|gb|AAP39180.1| UL40 [Human herpesvirus 1]
 gi|30960765|gb|AAP39182.1| UL40 [Human herpesvirus 1]
 gi|30960768|gb|AAP39184.1| UL40 [Human herpesvirus 1]
 gi|30960771|gb|AAP39186.1| UL40 [Human herpesvirus 1]
 gi|30960774|gb|AAP39188.1| UL40 [Human herpesvirus 1]
 gi|30960780|gb|AAP39192.1| UL40 [Human herpesvirus 1]
 gi|30960783|gb|AAP39194.1| UL40 [Human herpesvirus 1]
 gi|30960786|gb|AAP39196.1| UL40 [Human herpesvirus 1]
 gi|30960789|gb|AAP39198.1| UL40 [Human herpesvirus 1]
 gi|30960792|gb|AAP39200.1| UL40 [Human herpesvirus 1]
 gi|30960795|gb|AAP39202.1| UL40 [Human herpesvirus 1]
 gi|30960798|gb|AAP39204.1| UL40 [Human herpesvirus 1]
 gi|30960801|gb|AAP39206.1| UL40 [Human herpesvirus 1]
 gi|30960804|gb|AAP39208.1| UL40 [Human herpesvirus 1]
 gi|30960807|gb|AAP39210.1| UL40 [Human herpesvirus 1]
 gi|30960810|gb|AAP39212.1| UL40 [Human herpesvirus 1]
 gi|30960816|gb|AAP39216.1| UL40 [Human herpesvirus 1]
 gi|30960822|gb|AAP39220.1| UL40 [Human herpesvirus 1]
 gi|30960825|gb|AAP39222.1| UL40 [Human herpesvirus 1]
 gi|30960828|gb|AAP39224.1| UL40 [Human herpesvirus 1]
 gi|30960834|gb|AAP39228.1| UL40 [Human herpesvirus 1]
 gi|30960840|gb|AAP39232.1| UL40 [Human herpesvirus 1]
 gi|30960843|gb|AAP39234.1| UL40 [Human herpesvirus 1]
 gi|30960846|gb|AAP39236.1| UL40 [Human herpesvirus 1]
 gi|30960849|gb|AAP39238.1| UL40 [Human herpesvirus 1]
 gi|30960852|gb|AAP39240.1| UL40 [Human herpesvirus 1]
 gi|30960855|gb|AAP39242.1| UL40 [Human herpesvirus 1]
 gi|30960858|gb|AAP39244.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 177 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 232

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 233 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 292

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 293 ECRSTSYA-GAVVND 306


>gi|30960837|gb|AAP39230.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 177 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 232

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 233 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 292

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 293 ECRSTSYA-GAVVND 306


>gi|327198239|ref|YP_004306815.1| putative ribonucleotide reductase B subunit [Pseudomonas phage
           KPP10]
 gi|297591765|dbj|BAJ09185.1| putative ribonucleotide reductase B subunit [Pseudomonas phage
           KPP10]
          Length = 339

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 1/129 (0%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G  +  Q+ + DE+ H+   I V+  ++ +          Q+ R ++ +    E+ Y   
Sbjct: 191 GFNDINQWSLADETDHVEKNIRVLKAMRKDLTPEENAILDQEIRYLIEDYREAEVKYLVL 250

Query: 63  TMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
              KG    L      +Y+ ++   R  +  L    +  ENP PWM  +I+  +  NFFE
Sbjct: 251 AFEKGPQHDLTFEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNFFE 310

Query: 122 TRVTEYQQG 130
            +VT+Y   
Sbjct: 311 KKVTDYSHS 319


>gi|30960420|gb|AAP38952.1| UL40 [Human herpesvirus 1]
 gi|30960423|gb|AAP38954.1| UL40 [Human herpesvirus 1]
 gi|30960426|gb|AAP38956.1| UL40 [Human herpesvirus 1]
 gi|30960465|gb|AAP38982.1| UL40 [Human herpesvirus 1]
 gi|30960525|gb|AAP39022.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 177 TCQSNDLISRDEAVHTTASCYIYNNYLSG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 232

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 233 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 292

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 293 ECRSTSYA-GAVVND 306


>gi|38638230|ref|NP_944413.1| ribonucleotide reductase subunit 2 [Psittacid herpesvirus 1]
 gi|81987371|sp|Q6UDJ1|RIR2_PSHV1 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|34500236|gb|AAQ73719.1| unknown [Psittacid herpesvirus 1]
          Length = 313

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 4/125 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N     +P    K   ++   +  EA  +E  +    
Sbjct: 186 TCQSNDLISRDETIHTTASCCIYNNWLKGHP----KPSVKRIHQLFKEAVEIECDFLVAR 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            PK    ++  + + +++F ANR    IG+  ++        +   ++ L+K  NFFE R
Sbjct: 242 APKAARLIDIDAIQSFVRFTANRWLSMIGVPTIYDDPAPDPTFPLALMSLEKNVNFFEHR 301

Query: 124 VTEYQ 128
            T Y 
Sbjct: 302 STAYS 306


>gi|30960705|gb|AAP39142.1| UL40 [Human herpesvirus 1]
 gi|30960777|gb|AAP39190.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 177 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 232

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 233 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 292

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 293 ECRSTSYA-GAVVND 306


>gi|30960708|gb|AAP39144.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 177 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 232

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 233 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 292

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 293 ECRSTSYA-GAVVND 306


>gi|3183695|emb|CAA07027.1| ribonucleotide reductase small subunit [Felid herpesvirus 1]
          Length = 331

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 51/136 (37%), Gaps = 13/136 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K   ++  ++  EA  LE  +    
Sbjct: 204 TCQTNDLISRDEAIHTTASCCIYNNYLP----AQIKPSTERIHSLFREAVELECEFISTC 259

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---N-PFPWMSEVIDLKKEKNF 119
            P+    LN      Y+++ A+R    I + P+F       N P  +M     ++K  NF
Sbjct: 260 APRCSNLLNVADICNYVRYSADRLLGIIKVAPIFNVPPPHPNFPLAFMV----IEKHTNF 315

Query: 120 FETRVTEYQQGAGLKW 135
           FE   T Y  G  +  
Sbjct: 316 FEKHSTTYS-GTVIND 330


>gi|30960729|gb|AAP39158.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 177 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 232

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 233 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 292

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 293 ECRSTSYA-GAVVND 306


>gi|46143780|ref|ZP_00134247.2| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 336

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 5/102 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL    +++N I    ++P +    +E +Q++  +   A   E
Sbjct: 225 MEGNAKIIKFIARDEYLHLTGTQNMLNIIASGQDDPEMAEIAEECKQEAYDLFVAAAEQE 284

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF 97
             +A      G  +GLN     +Y+++I N R   +GL   F
Sbjct: 285 KEWAAYLFKDGSMIGLNEDILVKYVEYITNIRMQAVGLPRPF 326


>gi|325103985|ref|YP_004273639.1| ribonucleotide reductase [Pedobacter saltans DSM 12145]
 gi|324972833|gb|ADY51817.1| ribonucleotide reductase [Pedobacter saltans DSM 12145]
          Length = 324

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 4/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  ++    +   DE LH N GI +IN+IK E P    +  +Q+   ++ E+  +E    
Sbjct: 181 MKNVSNIIAWTSIDEQLHANAGIYIINKIKEEFPEYIDEAVEQEIYDIVTESINIEDEIL 240

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKE 116
                 G +  +N      +M++  +    QIG + L+  +E   +P  W  E I     
Sbjct: 241 GWIFENGDLEHINRRDLLNFMKYRIDVSLQQIGFKKLYNVSETEYSPMVWFEEEIFANSL 300

Query: 117 KNFFETRVTEYQQ 129
            +FF  R  EY +
Sbjct: 301 DDFFAKRPVEYTK 313


>gi|30960654|gb|AAP39108.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 177 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 232

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 233 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 292

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 293 ECRSTSYA-GAVVND 306


>gi|22550280|gb|AAN01603.1| ribonucleotide reductase small subunit [Human herpesvirus 2 strain
           G]
          Length = 342

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 12/138 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  EA  +EI +    
Sbjct: 210 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPEAARVYRLFREAVDIEIGFIRSQ 265

Query: 64  MPKGFVGLNA---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
            P     L+     + E Y++F A+R    I ++PL+  +  P P   +   ++   K  
Sbjct: 266 APTDSSILSPGALAAIENYVRFSADRLLGLIHMQPLYSASA-PAPDASFPLSLMSTDKHT 324

Query: 118 NFFETRVTEYQQGAGLKW 135
           NFFE R T Y  GA +  
Sbjct: 325 NFFECRSTSYA-GAVVND 341


>gi|30960753|gb|AAP39174.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           I +    I RDE++H      + N           K    +   +  +A  +EI +    
Sbjct: 177 ICQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 232

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 233 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 292

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 293 ECRSTSYA-GAVVND 306


>gi|323145837|gb|ADX32078.1| hypothetical protein [Pseudomonas phage P3_CHA]
 gi|323146023|gb|ADX32263.1| hypothetical protein [Pseudomonas phage PAK_P3]
          Length = 344

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 1/129 (0%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G  +  Q+ + DE+ H+   I V+  ++ +          Q+ R ++ +    E+ Y   
Sbjct: 196 GFNDINQWSLADETDHVEKNIRVLKAMRKDLTPEENSILDQEIRYLIEDYREAEVKYLVL 255

Query: 63  TMPKGFV-GLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
              KG    L      +Y+ ++   R  +  L    +  ENP PWM  +I+  +  NFFE
Sbjct: 256 AFEKGPQHDLTFEQTVEYIDYLCRLRLFECELLKEHQVGENPLPWMEWMINAARHDNFFE 315

Query: 122 TRVTEYQQG 130
            +VT+Y   
Sbjct: 316 KKVTDYSHS 324


>gi|221783|dbj|BAA00748.1| UL40 [Human herpesvirus 2]
          Length = 262

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N           K    +   +  EA  +EI +    
Sbjct: 132 TCQSNDLISRDEAVHTTASCYIYNNYLGG----HAKPEAARVYRLFREAVDIEIGFIRSQ 187

Query: 64  MPKGFVGLNA---PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+     + E Y++F A+R    I ++PL+        +   ++   K  NFF
Sbjct: 188 APTDSSILSPGALAAIENYVRFSADRLLGLIHMQPLYSAPAPDASFPLSLMSTDKHTNFF 247

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 248 ECRSTSYA-GAVVND 261


>gi|90018206|gb|ABD83916.1| ribonucleotide reductase M2 polypeptide [Ictalurus punctatus]
          Length = 139

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 7/78 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  +   ++++  A  +E  + 
Sbjct: 69  MPGLTFSNELISRDEGLHCDFACLMFK-------HLVNKPSEATVKSIIVNAVQIEQEFL 121

Query: 61  HETMPKGFVGLNAPSCEQ 78
            + +P   +G+N    +Q
Sbjct: 122 TQALPVKLIGMNCDLMKQ 139


>gi|327198722|emb|CCA61423.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
          Length = 395

 Score =  103 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 17/146 (11%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKE-----------FQQKSRTML 49
           M G+ +   + + DE+ H +  I +      EN                   +   + + 
Sbjct: 237 MKGMGQIVSWSIVDETQHTDGMITLFKIFVDENTECRCNPILGCNCIRPDVLRDTVKKIA 296

Query: 50  HEATLLEIAYAHETMPKG-----FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENP 103
            E   LE  + +    +      F+ ++    +QY++FIAN+R   +  +  F + ++NP
Sbjct: 297 LEMVRLEDEFINLAYDEYADDEVFMNISKTKLKQYIRFIANKRMEAMRYDHPFPEASDNP 356

Query: 104 FPWMSEVIDLKKEKNFFETRVTEYQQ 129
            P    +I+     NFFE R T+Y +
Sbjct: 357 LPEFEIMINAPINTNFFENRSTDYAR 382


>gi|30960492|gb|AAP39000.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      +             K    +   +  +A  +EI +    
Sbjct: 177 TCQSNDLISRDEAVHTTASCYIYTNYLGG----HAKPPPDRVYGLFRQAVEIEIGFIRSQ 232

Query: 64  MPKGFVGLNAPS---CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P     L+  +    E Y++F A+R    I ++PLF        +   ++   K  NFF
Sbjct: 233 APTDSHILSPAALAAIENYVRFSADRLLGLIHMKPLFSAPPPDASFPLSLMSTDKHTNFF 292

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 293 ECRSTSYA-GAVVND 306


>gi|193206379|ref|NP_500944.2| hypothetical protein F58F9.1 [Caenorhabditis elegans]
          Length = 581

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 27/120 (22%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    + I R                         K  + +   +++E+ L+E  + 
Sbjct: 489 LPGLTHSNELISR-------------------------KPAESRITEIINESVLVEQDFV 523

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            E++P   +G+N     +Y++F+A+    ++G    +  T+N F +M E I ++ + NFF
Sbjct: 524 RESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN-TKNLFDFM-ENISIEGKTNFF 581


>gi|332170225|gb|AEE19480.1| ATP-cone domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 425

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + GI+   +   ++E +H +FGID+I  IK ENP  +  E     + M  EA   E    
Sbjct: 282 LKGISNVVEATSKEEQIHGDFGIDIIKIIKAENPEWFDAEHSATVQEMCKEAFKAESNIV 341

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKE 116
                 G +  L      ++++   N+    IG+EP+F+  E       W  + I   K 
Sbjct: 342 DWIFEAGELDFLPKALVNEFIKDRFNKSLTSIGIEPVFEVDETLLKDAEWFDDEIIGTKH 401

Query: 117 KNFFETRVTEYQQGA 131
            +FF  R   Y + A
Sbjct: 402 GDFFVKRSVNYTKRA 416


>gi|238695114|ref|YP_002922308.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE]
 gi|220029250|gb|ACL78185.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE]
          Length = 388

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 5/123 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLE 56
           + G A+  ++I RDE LHL     +I Q +     +      +E + ++  +  +    E
Sbjct: 236 LEGNAKIMKFIARDEQLHLKGTQYIIRQWQTGVDGDEWKQIAEELEGEATKIFLDVVEQE 295

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
             +       G    L+    + Y++++A+ R    GL+  F    +P PWM + ++  +
Sbjct: 296 KEWVDHLFAMGAIPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSDE 355

Query: 116 EKN 118
            +N
Sbjct: 356 VQN 358


>gi|157311531|ref|YP_001469574.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           Phi1]
 gi|149380735|gb|ABR24740.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           Phi1]
          Length = 386

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 5/123 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLE 56
           + G A+  ++I RDE LHL     +I Q +     +      +E + ++  +  +    E
Sbjct: 234 LEGNAKIMKFIARDEQLHLKGTQYIIRQWQTGADGDEWKQIAEELEGEATKIFLDVVEQE 293

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
             +       G    L+    + Y++++A+ R    GL+  F    +P PWM + ++  +
Sbjct: 294 KEWVDHLFAMGAIPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSDE 353

Query: 116 EKN 118
            +N
Sbjct: 354 VQN 356


>gi|33620698|ref|NP_891801.1| aerobic NDP reductase small subunit [Enterobacteria phage RB49]
 gi|33438568|gb|AAL15125.2| aerobic NDP reductase small subunit [Enterobacteria phage RB49]
          Length = 386

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 5/123 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLE 56
           + G A+  ++I RDE LHL     +I Q +     +      +E + ++  +  +    E
Sbjct: 234 LEGNAKIMKFIARDEQLHLKGTQYIIRQWQTGVDGDEWKQIAEELEGEATKIFLDVVEQE 293

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK 115
             +       G    L+    + Y++++A+ R    GL+  F    +P PWM + ++  +
Sbjct: 294 KEWVDHLFAMGAIPNLSPEILKTYVEYLADSRMRAAGLKSPFSVRRHPLPWMRKWLNSDE 353

Query: 116 EKN 118
            +N
Sbjct: 354 VQN 356


>gi|159146681|gb|ABW90785.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4]
          Length = 316

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N    +      K   ++ + +   A  +EIA+    
Sbjct: 186 TCQSNDLISRDEAVHTTASCCLYNNYLGQY----AKPPSERIKQLFSNAVEIEIAFIKAK 241

Query: 64  MPKG---FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P       G    + E Y++F A+R    IG   LF        +   ++  +K  NFF
Sbjct: 242 APANSRILDGAAIAAIESYVRFSADRLLKLIGEPALFDEPPPNDGFPLRLMSTEKHTNFF 301

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 302 ECRSTAYA-GAVVND 315


>gi|301750612|gb|ADK88940.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4]
          Length = 316

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 8/135 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N    +      K   ++ + +   A  +EIA+    
Sbjct: 186 TCQSNDLISRDEAVHTTASCCLYNNYLGQY----AKPPSERIKQLFSNAVEIEIAFIKAK 241

Query: 64  MPKG---FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
            P       G    + E Y++F A+R    IG   LF        +   ++  +K  NFF
Sbjct: 242 APANSRILDGAAIAAIESYVRFSADRLLKLIGEPALFDEPPPNDGFPLRLMSTEKHTNFF 301

Query: 121 ETRVTEYQQGAGLKW 135
           E R T Y  GA +  
Sbjct: 302 ECRSTAYA-GAVVND 315


>gi|294661479|ref|YP_003579932.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15]
 gi|292660640|gb|ADE34888.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15]
          Length = 402

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LH       I   Q+  ++P +   ++  ++++  +  E    E
Sbjct: 248 MEGNAKIMRLIARDEALHQKGTQSKIRLWQMGKDDPEMVEISRRLKKEATAIFLEVYEQE 307

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A      G   G++  S   Y++ + ++R   +GL+  F    NP+PWM++ +    
Sbjct: 308 KEWAEHLFSVGDVEGVSLKSTIAYIEHLTDQRMRAVGLDSPFTPIPNPYPWMNKWLKSDN 367

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 368 VQVAPQEVEVSSY 380


>gi|291570484|dbj|BAI92756.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira
           platensis NIES-39]
          Length = 123

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 13/126 (10%)

Query: 19  LNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQ 78
           +     +I +     PH      Q +   M   A   E  + +  +    +G+   S EQ
Sbjct: 1   MRLFQKIIPEAMAIFPH-----SQDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQ 55

Query: 79  YMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKK----EKNFFETRVTEYQQGA 131
           Y +++AN R   IGLE L+   KY ++P+  +    D KK    + NFFE  VT Y   +
Sbjct: 56  YTKYLANIRLRSIGLESLYSDPKYQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSS 115

Query: 132 GLK-WD 136
           G+  WD
Sbjct: 116 GVSGWD 121


>gi|9625893|ref|NP_040141.1| ribonucleotide reductase subunit 2 [Human herpesvirus 3]
 gi|132630|sp|P09247|RIR2_VZVD RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           Short=R2; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|259645448|sp|Q4JQV7|RIR2_VZVO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           Short=R2; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|60007|emb|CAA27901.1| ribonucleotide reductase (small subunit) [Human herpesvirus 3
           strain Dumas]
 gi|46981429|gb|AAT07700.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|46981500|gb|AAT07776.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|66865986|gb|AAY57634.1| ORF18 [Human herpesvirus 3]
 gi|66866058|gb|AAY57705.1| ORF18 [Human herpesvirus 3]
 gi|83721826|emb|CAI44861.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|90992817|gb|ABE03036.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|91980319|gb|ABE67126.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94481816|gb|ABF21518.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94481890|gb|ABF21591.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94481964|gb|ABF21664.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482038|gb|ABF21737.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482112|gb|ABF21810.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482186|gb|ABF21883.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482260|gb|ABF21956.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482334|gb|ABF22029.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482408|gb|ABF22102.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482482|gb|ABF22175.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482556|gb|ABF22248.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|111184743|gb|ABH08451.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|157965778|gb|ABW06924.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
          Length = 306

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 8/132 (6%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H +    + N    E P +       +   +  EA  +E A+    
Sbjct: 182 TCQFNDLISRDEAIHTSASCCIYNNYVPEKPAI------TRIHQLFSEAVEIECAFLKSH 235

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            PK  + +N  +  QY++F A+R    I +  LF        +    +   K  NFFE  
Sbjct: 236 APKTRL-VNVDAITQYVKFSADRLLSAINVPKLFNTPPPDSDFPLAFMIADKNTNFFERH 294

Query: 124 VTEYQQGAGLKW 135
            T Y  G  +  
Sbjct: 295 STSYA-GTVIND 305


>gi|261868068|ref|YP_003255990.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|293389919|ref|ZP_06634253.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|261413400|gb|ACX82771.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|290950453|gb|EFE00572.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 329

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E +H  FGI + + ++ E P L+T EF  + + +  +A   E A   
Sbjct: 187 KGISNAVEATSKEEEIHGRFGISLYHLLREEQPELFTDEFYAELKELAEQAFNAEKAILD 246

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
                G +  L+  + E Y+    N     +GLEP++  +        W    I   KE 
Sbjct: 247 WIFEDGELSFLSKATVENYIANRYNNSLVTLGLEPIYNISPAQLKETEWFDIEILSTKET 306

Query: 118 NFFETRVTEYQQ 129
           +FF  R T+Y +
Sbjct: 307 DFFNKRSTDYSK 318


>gi|304373620|ref|YP_003858365.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16]
 gi|299829576|gb|ADJ55369.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16]
          Length = 391

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLWTKEF--QQKSRTMLHEATLLE 56
           M G A+  + I RDE+LH       I   Q+  ++P +    F  ++++  +  E    E
Sbjct: 237 MEGNAKIMRLIARDEALHQKGTQSKIRLWQMGKDDPEMAEIAFQYEEEATQIFLEVYEQE 296

Query: 57  IAYAHETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A          G++  S   Y++ + ++R   +GL+  FK + NP+PWM++ +    
Sbjct: 297 KEWAEHLFSIGDVDGVSLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNKWLKSDN 356

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 357 VQVAPQEVEVSSY 369


>gi|330004285|ref|ZP_08304843.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|328536657|gb|EGF62979.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 380

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 6/117 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           + G A+  + I RDE+LH      ++  ++     L      +E +      + +    E
Sbjct: 227 LEGNAKIMRLIARDEALHCEGTERMLRNMRNGREGLLWKQIAEEEEPFVYQTMLDVAEQE 286

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVI 111
           + +A      G  +GLNA   +QY+++  N    ++ L PLF     +P PWM+  +
Sbjct: 287 MRWADYLFKDGSMIGLNAKILKQYVKYRTNLAMKRLHLNPLFDDVTFDPLPWMNSWL 343


>gi|255683173|ref|YP_003084381.1| UL40 [Duck enteritis virus]
 gi|158343199|gb|ABW35292.1| ribonucleotide reductase subunit 2 [Anatid herpesvirus 1]
 gi|208401182|gb|ACI26683.1| UL40 [Anatid herpesvirus 1]
 gi|254839988|gb|ACT83534.1| UL40 [Anatid herpesvirus 1]
          Length = 355

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             +    I RDE++H      + N+   +      K    +   +  EA  LE  +    
Sbjct: 228 TCQANTMISRDETIHTKASCVIYNKHLQKYK----KPSTCRIYKLFSEAVKLECEFLRAR 283

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            P     ++  +   Y++F A+R    IGL PLF        +    +   ++ NFFE R
Sbjct: 284 APSDSAIIDTEAICSYVRFNADRLLSDIGLAPLFDEPPPKHDFPLAFMATSQQTNFFERR 343

Query: 124 VTEYQQGAGLKW 135
            T Y  G+ L  
Sbjct: 344 NTTYA-GSVLND 354


>gi|66391516|ref|YP_239041.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43]
 gi|62288604|gb|AAX78587.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43]
          Length = 391

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN--QIKIENPHLWTK--EFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LH       I   Q+  ++P +     ++++++  +  E    E
Sbjct: 237 MEGNAKIMRLIARDEALHQKGTQSKIRLWQMGKDDPEMAEIAYQYEEEATQIFLEVYEQE 296

Query: 57  IAYAHETMP-KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI-DLK 114
             +A          G+   S   Y++ + ++R   +GL+  FK + NP+PWM++ +    
Sbjct: 297 KEWAEHLFSIGDVDGVTLKSTIAYIEHLTDQRMRAVGLQSPFKPSPNPYPWMNKWLKSDN 356

Query: 115 KEKNFFETRVTEY 127
            +    E  V+ Y
Sbjct: 357 VQVAPQEVEVSSY 369


>gi|163786628|ref|ZP_02181076.1| ribonucleoside-diphosphate reductase , beta subunit 1
           [Flavobacteriales bacterium ALC-1]
 gi|159878488|gb|EDP72544.1| ribonucleoside-diphosphate reductase , beta subunit 1
           [Flavobacteriales bacterium ALC-1]
          Length = 429

 Score = 99.3 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G++   +   ++E++H +FGID+I  IK ENP  +  E  +  R +  EA   E    
Sbjct: 286 LKGVSNVVEATSKEENIHGDFGIDIIKIIKAENPTWFDAEHNEIVRELCREAFASESELV 345

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKE 116
                 G +  L      ++++   N     IG+E +F   E       W  + I   K 
Sbjct: 346 DWIFEAGELEFLPKDVINEFLKNRFNNSLESIGIEKVFDVDETLLTQTEWFDDEIIGTKH 405

Query: 117 KNFFETRVTEYQQGA 131
            +FF  R   Y +  
Sbjct: 406 GDFFVKRSINYSKRT 420


>gi|13242410|ref|NP_077433.1| ribonucleotide reductase subunit 2 [Cercopithecine herpesvirus 9]
 gi|11036562|gb|AAG27191.1|AF275348_11 ribonucleotide reductase, small subunit [Cercopithecine herpesvirus
           9]
          Length = 311

 Score = 98.9 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           + +    I RDE++H +    + N           K    +   +  EA  +E  +    
Sbjct: 184 MCQLNDLISRDEAVHTSASCCIYNNYIS----YKEKPAIPRIHQLFMEAVNIECNFISAY 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            PK    +N  +  QY+++ A+R    I +  LF        +    +  +K  NFFE  
Sbjct: 240 APKNQRIINIDAILQYVRYNADRLLSAINIPVLFNAPAPKADFPLAFMTAEKHTNFFERH 299

Query: 124 VTEYQQGAGLKW 135
            T Y  GA +  
Sbjct: 300 STAY-TGAVIND 310


>gi|294338336|emb|CBJ94375.1| Probable ribonucleotide reductase (small subunit) [Campylobacter
           phage CPt10]
          Length = 369

 Score = 98.2 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 10/137 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK---IENPHLWTKEFQQKSRTMLHEATLLEI 57
           M    +  Q I RDE+LHL    ++I  +     E         +        EA   E 
Sbjct: 214 MERTGKILQLICRDENLHLAITQNLIKILSRSPEEGFINAWNSIKDNITDRYLEAADQEF 273

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK 115
            +      KG F+G+     + Y++++ N+R   IG + +F  + +NP PW+   I+   
Sbjct: 274 KWIDYLFSKGAFLGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINY-- 331

Query: 116 EKN---FFETRVTEYQQ 129
           +KN     E+ +T Y+ 
Sbjct: 332 DKNEVLPQESEITNYKM 348


>gi|294338139|emb|CBJ93977.1| Probable ribonucleotide reductase (small subunit) [Campylobacter
           phage CP220]
          Length = 369

 Score = 98.2 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 6/135 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK---IENPHLWTKEFQQKSRTMLHEATLLEI 57
           M    +  Q I RDE+LHL    ++I  +     E         +        EA   E 
Sbjct: 214 MERTGKILQLICRDENLHLAITQNLIKILSRSPEEGFINAWNSIKDNITDRYLEAADQEF 273

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKK 115
            +      KG F+G+     + Y++++ N+R   IG + +F  + +NP PW+   I+  K
Sbjct: 274 KWIDYLFSKGAFLGMTPELAKNYIKYLINKRLKAIGFKEVFAGFNKNPIPWVETYINYDK 333

Query: 116 -EKNFFETRVTEYQQ 129
            E    E+ +T Y+ 
Sbjct: 334 NEVLPQESEITNYKM 348


>gi|295134784|ref|YP_003585460.1| ribonucleotide reductase [Zunongwangia profunda SM-A87]
 gi|294982799|gb|ADF53264.1| ribonucleotide reductase [Zunongwangia profunda SM-A87]
          Length = 324

 Score = 97.8 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 4/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  ++    +   DE +H N GI +INQI+ E P  + +E  +K   ++  +  +E    
Sbjct: 181 MKNVSNIIAWTSVDEQIHANAGIYIINQIREEYPDYFNEEMTRKLTDVVTRSIEVEEEIL 240

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKE 116
                 G    +N  +   +M+F  +     IGL   +  T     P  W  E +     
Sbjct: 241 DWIFENGQLENINKKNLMDFMKFRLDDSLKSIGLPKQYNITAAEYQPMLWFEEEVFANSL 300

Query: 117 KNFFETRVTEYQQ 129
            +FF  R  +Y +
Sbjct: 301 DDFFARRPVDYTK 313


>gi|209523562|ref|ZP_03272116.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima
           CS-328]
 gi|209495967|gb|EDZ96268.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima
           CS-328]
          Length = 112

 Score = 97.8 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 41  FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF--- 97
            Q +   M   A   E  + +  +    +G+   S EQY +++AN R   IGLE L+   
Sbjct: 7   SQDRIYEMFDAAVQHECRWTNHIVGNNILGITEHSTEQYTKYLANIRLRSIGLESLYSDP 66

Query: 98  KYTENPFPWMSEVIDLKK----EKNFFETRVTEYQQGAGLK-WD 136
           KY ++P+  +    D KK    + NFFE  VT Y   +G+  WD
Sbjct: 67  KYQKSPYTHLERFSDTKKEAHTKANFFEASVTSYVMSSGVSGWD 110


>gi|117530173|ref|YP_851016.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|86990305|dbj|BAE79256.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|117165785|dbj|BAF36093.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|124270949|dbj|BAF45776.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-LMM02]
 gi|124270951|dbj|BAF45777.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-LMM03]
 gi|124270953|dbj|BAF45778.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-HPM05]
          Length = 348

 Score = 97.8 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 12/133 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   A+  + I RDE  HL    ++I     E   +W      +   +  +A   EI + 
Sbjct: 206 MSATADIIKLIERDEQTHLKLISNIIRTGLAEGTLMWD---TDEIIDLFRKAAEYEIEWG 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKE- 116
              +  G  G+NA + EQY +++ N R   IGL  +F+   Y+ NP+  +        E 
Sbjct: 263 LH-IGLGVNGINATTIEQYAKYLCNIRARAIGLPTVFEGRQYSRNPYAHLERFAATTGED 321

Query: 117 ----KNFFETRVT 125
                NFFE+ V 
Sbjct: 322 SITRDNFFESGVI 334


>gi|57790965|ref|YP_182369.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 1]
 gi|5918981|gb|AAD56212.1|AF168792_13 ribonucleotide reductase small subunit [Gallid herpesvirus 1]
          Length = 310

 Score = 97.4 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 4/125 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           + +    I RDE++H      + N    ++     K   ++   +  EA  +E  +    
Sbjct: 183 MCQSNDLISRDEAVHTTASCRIYNNWLGDHK----KPSAKRIHQLFKEAIEIECNFLASR 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            P+    ++  + + ++++  +R    IG+  +F        +   ++ + K  NFFE R
Sbjct: 239 APQASRLIDLEAIQSFVRYSGDRLLTAIGVPTIFDEPPPDPSFPLTLMSIDKNVNFFEHR 298

Query: 124 VTEYQ 128
            T Y 
Sbjct: 299 STAYN 303


>gi|329738368|gb|AEB97332.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 1]
          Length = 310

 Score = 97.4 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 4/125 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           + +    I RDE++H      + N    ++     K   ++   +  EA  +E  +    
Sbjct: 183 MCQSNDLISRDEAVHTTASCRIYNNWLGDHK----KPSAKRIHQLFKEAIEIECNFLASR 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR 123
            P+    ++  + + ++++  +R    IG+  +F        +   ++ + K  NFFE R
Sbjct: 239 APQASRLIDLEAIQSFVRYSGDRLLTAIGVPTIFDEPPPDPSFPLTLMSIDKNVNFFEHR 298

Query: 124 VTEYQ 128
            T Y 
Sbjct: 299 STAYN 303


>gi|312262463|gb|ADQ52758.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage PX29]
          Length = 376

 Score = 97.4 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE LHL     +I   +   ++  +    +  + K+ ++  E    E
Sbjct: 222 MEGNAKIMRLIARDEQLHLKGTQYLIRAWQNGDDDSEMVDIARRLESKAVSIFIEVAEQE 281

Query: 57  IAYAHETMPK-GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVID 112
             +A + +      GL+      Y+ ++   R   +GL    +     ++P PW+ + ++
Sbjct: 282 KEWAKDLLGNVSIPGLSLAEMIDYIDYLTGSRMRSVGLPVPDEVNVPIKHPLPWIRKWLN 341


>gi|251792578|ref|YP_003007304.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter
           aphrophilus NJ8700]
 gi|247533971|gb|ACS97217.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           aphrophilus NJ8700]
          Length = 329

 Score = 97.0 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E +H  FGI + + ++ E P L+T  F  + + +  +A   E    +
Sbjct: 187 KGISNAIEATSKEEEIHGRFGITLYSILREEQPELFTDAFFTELKELADQAFTAEKEILN 246

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
                G +  L+  + E Y+    N     +GLEP +           W    I   KE 
Sbjct: 247 WIFEDGELDFLSKATVENYIANRYNNSLQALGLEPAYNINPEQLKETEWFDIEILSTKET 306

Query: 118 NFFETRVTEYQQ 129
           +FF  R T+Y +
Sbjct: 307 DFFNKRSTDYSK 318


>gi|307107666|gb|EFN55908.1| hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis]
          Length = 849

 Score = 96.6 bits (240), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 7/105 (6%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
                  I RDE +H+     + + ++        K    +++ ++ EA   E A+    
Sbjct: 747 TGHATDLISRDEGVHVESAGVMYSLLRS-------KLTDSQAQGIVGEAVEAERAFVCGQ 799

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS 108
           +P    GL A + E+Y+Q++ +R    +G  PL++   NP PW+ 
Sbjct: 800 LPLEATGLEAGAMEEYLQYVGDRLLGALGHAPLYRVAANPLPWLE 844


>gi|293411957|ref|ZP_06654682.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|309797907|ref|ZP_07692288.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|220980068|emb|CAP72260.1| Ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
           LF82]
 gi|291469512|gb|EFF12001.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|308118515|gb|EFO55777.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|323934216|gb|EGB30640.1| ribonucleotide reductase [Escherichia coli E1520]
          Length = 380

 Score = 96.6 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 6/117 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----SRTMLHEATLLE 56
           + G  +  ++I RDE+LH      +I  ++     L  KE            +      E
Sbjct: 227 LEGNTKIMRFIARDEALHCEGTERMIRFMRTGREGLLWKEIAADEENVIYDTMKSVAEQE 286

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVI 111
           + +A      G  +GLNA   + Y+++  N   +++GL+ LF + T +P  WM++ +
Sbjct: 287 MNWADYLFKDGSMIGLNADILKTYVKYRTNLAMNRLGLKALFPEVTTDPLVWMNKWL 343


>gi|222475861|ref|YP_002564382.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239]
 gi|222454232|gb|ACM58496.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239]
          Length = 336

 Score = 96.2 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 4/134 (2%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GIA   +   ++E +H  FG+++++ I+ ENP L+  EF+ + R     A   E+    
Sbjct: 194 KGIANAVEATSKEEQIHGLFGVELVDTIREENPGLFDDEFEAEIREACRRAYEAEMGMLD 253

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
               +G +  L      ++++   N+    +G+ P+F+  ++      W  E I + K+ 
Sbjct: 254 WIFGEGELQFLPREYVNEFLKDRFNQSLENVGVYPMFETDDDLLDETRWFDEDIMMTKDN 313

Query: 118 NFFETRVTEYQQGA 131
           +FF  R T Y +  
Sbjct: 314 DFFSKRSTTYNKHT 327


>gi|86140897|ref|ZP_01059456.1| ribonucleoside-diphosphate reductase, beta subunit 1
           [Leeuwenhoekiella blandensis MED217]
 gi|85832839|gb|EAQ51288.1| ribonucleoside-diphosphate reductase, beta subunit 1
           [Leeuwenhoekiella blandensis MED217]
          Length = 427

 Score = 96.2 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + GI+   +   ++E +H +FG+D+IN IK ENP  + +E     + M   +   E    
Sbjct: 284 LKGISNAVEATSKEEQIHGDFGVDIINIIKKENPEWFDEEHNNLIKEMCLNSFEAESKVV 343

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKE 116
                KG +  L      ++++   N+    IGLE LF   E       W  + I   K 
Sbjct: 344 DWIFEKGELDFLPKAVINEFLKNRFNKSLEAIGLEKLFDIDEALLQETEWFDDEIIGTKH 403

Query: 117 KNFFETRVTEYQQGA 131
            +FF  R   Y +  
Sbjct: 404 GDFFVKRSINYSKRT 418


>gi|90407600|ref|ZP_01215781.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp.
           CNPT3]
 gi|90311303|gb|EAS39407.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp.
           CNPT3]
          Length = 424

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + GI+   +   ++E LH NFGID+I  IK ENP  + +E+QQ  RT+  +A   E    
Sbjct: 281 LKGISNVVEATSKEEQLHGNFGIDLIQIIKQENPSWFNEEYQQSVRTLCLQAFKSESKII 340

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKE 116
                +G +  +     +++++   N+    I +E +F+  E       W  + I   K 
Sbjct: 341 DWIYAEGELDFIPKAQVKEFIKNRFNQSLQSIDIEKVFEIDEKLLEKTEWFDDEIIGTKH 400

Query: 117 KNFFETRVTEYQQGA 131
            +FF  R   Y + +
Sbjct: 401 GDFFVKRSINYNKRS 415


>gi|149369595|ref|ZP_01889447.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified
           eubacterium SCB49]
 gi|149357022|gb|EDM45577.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified
           eubacterium SCB49]
          Length = 424

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G++   +   ++E +H +FGID+I  +K E+P  +T E+ +  + +  +A   E+   
Sbjct: 281 LKGVSNVVEATSKEEQIHGDFGIDLILILKDEHPEWFTPEYHENIKRLCLDAYEAEVDLV 340

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKE 116
                +G +  L      ++++   N+    IG+E +F   E       W  + I   K 
Sbjct: 341 DWIFEEGELDFLPKTVINEFLKNRFNKSLESIGVEKVFDVDEALVIQTEWFDDEIIGTKH 400

Query: 117 KNFFETRVTEYQQGA 131
            +FF  R   Y +  
Sbjct: 401 GDFFVKRSVNYSKRT 415


>gi|145637995|ref|ZP_01793631.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
          influenzae PittHH]
 gi|145268805|gb|EDK08772.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
          influenzae PittHH]
          Length = 115

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 5/89 (5%)

Query: 1  MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHL--WTKEFQQKSRTMLHEATLLE 56
          M G A+  ++I RDE+LHL     ++N +    ++P +    +E +Q++  +   A   E
Sbjct: 1  MEGNAKIIKFIARDEALHLTGTQHILNIMAAGQDDPEMAEIAEECKQEAYDLFVAAAEQE 60

Query: 57 IAYAHETMPKG-FVGLNAPSCEQYMQFIA 84
           A+A      G  +GLN     QY+++I 
Sbjct: 61 KAWADYLFKDGSMIGLNRDILVQYVEYIT 89


>gi|51518029|ref|YP_067954.1| BaRF1 [Macacine herpesvirus 4]
 gi|18025480|gb|AAK95424.1| BaRF1 [Macacine herpesvirus 4]
          Length = 302

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 12/132 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+     YI RDE LH      + N +         +   Q  + +   A  +E A+ 
Sbjct: 174 MPGVCLANNYISRDELLHTRAASLLYNSMTA----PADRPGAQWIQELFRTAVEVETAFI 229

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEK 117
            E    G   ++  +  Q+++  A+R    IGL PL+      + P  +M+ +    K+ 
Sbjct: 230 -EARGWGVTLVDVQAIRQFLEATADRILGDIGLPPLYGTPPPRDCPLTYMTSI----KQT 284

Query: 118 NFFETRVTEYQQ 129
           NFFE    +Y  
Sbjct: 285 NFFEQESADYTM 296


>gi|45478633|ref|NP_995489.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|52788092|ref|YP_093920.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis]
 gi|145597234|ref|YP_001154698.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|162417832|ref|YP_001604568.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|229896974|ref|ZP_04512133.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia pestis Pestoides A]
 gi|45357286|gb|AAS58680.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Yersinia pestis biovar Microtus str. 91001]
 gi|52538021|emb|CAG27446.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Yersinia pestis]
 gi|145213002|gb|ABP42407.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Pestoides F]
 gi|162350804|gb|ABX84753.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|229700010|gb|EEO88050.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia pestis Pestoides A]
          Length = 380

 Score = 94.7 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 6/117 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           + G  +  ++I RDE+LH      +I  ++     L       E +      + +    E
Sbjct: 227 LEGNTKIMRFIARDEALHCEGTERMIRFMRTGREGLMWKMIAAEEESFIYQTMMDVAGQE 286

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVI 111
           + +A      G  +GLNA   + Y+++  N    ++GL PLF +  ++P  WM++ +
Sbjct: 287 MRWADYLFKDGSMIGLNADILKSYVKYRTNLAMRRLGLRPLFPEIKDDPLVWMNKWL 343


>gi|38639969|ref|NP_943924.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage Aeh1]
 gi|33414658|gb|AAQ17701.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage Aeh1]
          Length = 376

 Score = 94.7 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLW--TKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE LHL     +I   +   ++  ++   K  + K+  +  E    E
Sbjct: 222 MEGNAKIMRLIARDEQLHLKGTQYLIRAWQNAEDDSEMYEIAKRLEHKAVQIFLEVAEQE 281

Query: 57  IAYAHETMPK-GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVID 112
             +A + +      GL+  S   Y+ ++   R    GL    +     ++P PW+ + ++
Sbjct: 282 KEWARDLLGNVTIPGLSLSSMLDYIDYLTVSRMRSAGLPAPEELNIGMKHPLPWIRKWLN 341


>gi|257373022|ref|YP_003175796.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286]
 gi|257167746|gb|ACV49438.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286]
          Length = 336

 Score = 94.7 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 67/134 (50%), Gaps = 4/134 (2%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GIA   +   ++E +H  FG++++  I+ ENP L+ ++F+++ +    +A   E+    
Sbjct: 194 KGIANAVEATSKEEQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQQAFEAEMKILD 253

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
               +G +  L     + +++   N+    +G+EP+F+  E+      W  E I + K+ 
Sbjct: 254 WIFGEGELEFLPRAHVDAFLRDRFNQSLENVGVEPIFEPDEDLLEETRWFDEDIMMTKDN 313

Query: 118 NFFETRVTEYQQGA 131
           +FF  R T Y + A
Sbjct: 314 DFFSKRSTTYNKHA 327


>gi|319957101|ref|YP_004168364.1| ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
           16511]
 gi|319419505|gb|ADV46615.1| Ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
           16511]
          Length = 337

 Score = 93.9 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 7/135 (5%)

Query: 2   VGIAEQYQYIMRDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
            G  +  ++I RDE + HL    ++   I  EN          K+  M+ EA  +E+ Y 
Sbjct: 199 PGARDMIKFIARDEINTHLPLFANIFKTIYKENKIP--ASIVDKAYEMIQEAVDIELEYG 256

Query: 61  HETMPK-GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF--PWMSEVIDLKKE- 116
              +     +GL     E+ +   AN R ++IGLEP+F+ T   +    + + + +    
Sbjct: 257 KYLLENYPIMGLTDELMEKTVYNYANDRLNKIGLEPIFEETPQTYLQKLVEKHLKMNDVR 316

Query: 117 KNFFETRVTEYQQGA 131
            NFFE+ V  Y + +
Sbjct: 317 SNFFESNVANYAKNS 331


>gi|261885428|ref|ZP_06009467.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           fetus subsp. venerealis str. Azul-94]
          Length = 282

 Score = 93.9 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 38/78 (48%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+G A+  ++I RDE  HL    ++IN ++ E P L+T E + K   M  +A  LEI + 
Sbjct: 205 MLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWG 264

Query: 61  HETMPKGFVGLNAPSCEQ 78
                   +G      E+
Sbjct: 265 KYITGNQIMGFTDDIIEE 282


>gi|67906414|gb|AAY82584.1| ribonucleotide reductase subunit 2 [Carassius carassius]
          Length = 246

 Score = 93.9 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   +         HL  K  ++  + ++  A  +E  + 
Sbjct: 183 MPGLTFSNELISRDEGLHCDFACLMFK-------HLVNKPSEETVKKIIVNAVAIEQEFL 235

Query: 61  HETMPKGFVGL 71
            + +P   +G+
Sbjct: 236 TDALPVKLIGM 246


>gi|9629834|ref|NP_045318.1| ribonucleotide reductase subunit 2 [Bovine herpesvirus 1]
 gi|266916|sp|Q01319|RIR2_BHV1C RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|330772|gb|AAA46063.1| ribonucleotide reductase small subunit [Bovine herpesvirus 1]
 gi|995642|emb|CAA90928.1| UL40 [Bovine herpesvirus 1]
 gi|1149578|emb|CAA88899.1| UL40 [Bovine herpesvirus 1]
 gi|2653307|emb|CAA06093.1| ribonucleotide reductase small subunit [Bovine herpesvirus type
           1.1]
          Length = 314

 Score = 93.5 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 9/133 (6%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
             +    I RDE++H      +  N +  E P         +   +  EA  L  A    
Sbjct: 189 TCQTNDLISRDEAVHTAASCCIFDNYLGGERP------PPARIYELFREAWKL-SASLFG 241

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFET 122
             P+G   L+  +   Y+++ A+R    I L PLF        +   ++  +K  NFFE 
Sbjct: 242 CAPRGSHILDVEAISAYVEYSADRLLAAIQLPPLFGTPPPGTDFPLALMTAEKHTNFFER 301

Query: 123 RVTEYQQGAGLKW 135
           R T Y  G  +  
Sbjct: 302 RSTNY-TGTVIND 313


>gi|310722637|ref|YP_003969460.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage phiAS5]
 gi|306021480|gb|ADM80014.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage phiAS5]
          Length = 376

 Score = 93.5 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 8/122 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHLWT--KEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE LHL      I   +   ++P +    K  + K+  +  +A   E
Sbjct: 222 MEGNAKIMKLIARDEQLHLKGTQYQIRTWQNGEDDPEMVDIAKRLESKAVQIFLDAAEQE 281

Query: 57  IAYAHETM-PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVID 112
             +A + +       L+  S   Y+ ++   R    GL    +    +++P PW+ + ++
Sbjct: 282 KEWARDLLSRVSIPSLSLQSMLDYIDYLTASRMQSAGLPIPEELNVPSKHPLPWIRKWLN 341

Query: 113 LK 114
            +
Sbjct: 342 SE 343


>gi|152991848|ref|YP_001357569.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
 gi|151423709|dbj|BAF71212.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
          Length = 337

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 7/135 (5%)

Query: 2   VGIAEQYQYIMRDE-SLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
            G  +  ++I RDE + HL    ++   I+ EN           +  M+ +A  +E+ Y 
Sbjct: 199 PGARDMIKFIARDELNTHLPLFANIFKTIQKENN--IATSTIDAAYKMIQDAVKIELEYG 256

Query: 61  HETMPK-GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF--PWMSEVIDLKK-E 116
           H  + +   +G+     EQ +   AN R  +IGL+P+F  +   +    +++ +++ + +
Sbjct: 257 HYLLDQFPIMGVTHELMEQTVYNYANDRLKKIGLDPIFDESATTYLQKLVTKHLEMNEVK 316

Query: 117 KNFFETRVTEYQQGA 131
            NFFE+ V+ Y + +
Sbjct: 317 SNFFESNVSNYAKSS 331


>gi|327409820|ref|YP_004347240.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
 gi|326784994|gb|AEA07128.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
          Length = 319

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 3/130 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+    ++I RDE+LH  F   + N +  E   ++ +  Q++   +L  A      + 
Sbjct: 179 LKGLRTANEWISRDEALHKKFAEVLYNFLVDEL-KVFERVSQERCHEILTSAIEAVTDFI 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             ++    V ++A     YM+   +     +  E ++   EN   +M  +I L+ + NFF
Sbjct: 238 KYSLRLDNVNIDADRMLGYMKRAVDDLATGLKYEKVYN-AENTLDYML-LIGLENKGNFF 295

Query: 121 ETRVTEYQQG 130
           E  +T+Y +G
Sbjct: 296 EGVITDYSKG 305


>gi|82492124|gb|ABB77921.1| ribonucleotide reductase beta chain [Environmental halophage 1
           AAJ-2005]
          Length = 358

 Score = 93.1 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 4/134 (2%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GIA   +   ++E +H  FG +++  I+ ENP L+  +F  + +    +A   E     
Sbjct: 216 KGIANAVEATSKEEQIHGLFGQELVETIREENPDLFDDDFTDEIQDACQQAYEAESEILD 275

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
             +  G +  L     + +++   N+     G++P+F   E+      W  E I + KE 
Sbjct: 276 WILEDGELDFLPREHIDAFLKDRFNQSLDNAGVDPVFDPDEDVVDETRWFDEDIMMTKEN 335

Query: 118 NFFETRVTEYQQGA 131
           +FF  R T Y +  
Sbjct: 336 DFFSKRSTTYNKHT 349


>gi|82503214|ref|YP_401656.1| BaRF1 [Human herpesvirus 4]
 gi|139424488|ref|YP_001129453.1| BaRF1 [Human herpesvirus 4 type 2]
 gi|238055355|sp|P0CAP6|RIR2_EBVB9 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|238055356|sp|P0CAP7|RIR2_EBVA8 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|238055357|sp|P0C701|RIR2_EBVG RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1334857|emb|CAA24843.1| unnamed protein product [Human herpesvirus 4]
 gi|23893602|emb|CAD53406.1| ribonucleoside-diphosphate reductase small chain [Human herpesvirus
           4]
 gi|64173256|gb|AAY41106.1| unknown [Human herpesvirus 4]
 gi|82703964|gb|ABB89233.1| BaRF1 [Human herpesvirus 4]
          Length = 302

 Score = 92.8 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 12/132 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI     YI RDE LH      + N +  +      +      + +   A  +E A+ 
Sbjct: 174 MPGICLANNYISRDELLHTRAASLLYNSMTAK----ADRPRATWIQELFRTAVEVETAFI 229

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEK 117
            E   +G   ++  + +Q+++  A+R    IG  PL+      + P  +M+ +    K+ 
Sbjct: 230 -EARGEGVTLVDVRAIKQFLEATADRILGDIGQAPLYGTPPPKDCPLTYMTSI----KQT 284

Query: 118 NFFETRVTEYQQ 129
           NFFE   ++Y  
Sbjct: 285 NFFEQESSDYTM 296


>gi|326804582|ref|YP_004327453.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage
           Vi01]
 gi|301795232|emb|CBW37950.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage
           Vi01]
          Length = 367

 Score = 92.8 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 4/116 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPH--LWTKEFQQKSRTMLHEATLLEIA 58
           M G A+  + I RDE  HL      +N++ + +P   +  +E + +   M  +    E  
Sbjct: 220 MEGNAKIIRQIARDEQDHLILTQTFLNRLPLLDPDFGIIREELRGEMTQMYVDVVNQEKE 279

Query: 59  YAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVID 112
           +A+     G  +GLNA    Q + ++A  R   IG   P     +NP PW++E +D
Sbjct: 280 WANYLFKDGSMLGLNANILHQMVDWLATHRMGAIGHPYPGQARKDNPVPWINEWLD 335


>gi|256422447|ref|YP_003123100.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588]
 gi|256037355|gb|ACU60899.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588]
          Length = 324

 Score = 92.8 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 4/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  ++    +   DE +H N GI +IN+I+ E P ++ +    +   ++ E+  +E    
Sbjct: 181 MKNVSNIIAWTSVDEQIHANAGIYLINKIREEYPEMFDEATITRVSNLVKESIEVESNIL 240

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKE 116
                +G    ++      +M++ A+    +I L  LF  +     P  W  E +     
Sbjct: 241 DWIFSEGKIDTVSKEHLVNFMKYRADDSLKKINLPALFNISTEDNKPMLWFEEEVFANSL 300

Query: 117 KNFFETRVTEYQQ 129
            +FF  R  +Y +
Sbjct: 301 DDFFAKRPVDYTK 313


>gi|32709437|gb|AAP86737.1| NrdB [Enterobacteria phage TuIa]
          Length = 391

 Score = 92.4 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++     +      KE +Q++  +  E    E
Sbjct: 236 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDEWVQIAKECEQEAVDIFMEVNSQE 295

Query: 57  IAYAHETMPKGF-VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   G+N  S   ++ ++   R  Q GL  P+    T++P+PW+ E ++
Sbjct: 296 KEWAAHLFKDGTCPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPYPWIREYLN 354


>gi|24943146|ref|NP_733908.1| ORF54 [Callitrichine herpesvirus 3]
 gi|13676697|gb|AAK38263.1|AF319782_57 ORF54 [callitrichine herpesvirus 3]
          Length = 302

 Score = 92.4 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 48/131 (36%), Gaps = 10/131 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIA 58
           M GI     YI RDE LH      + N +  K E P        +    +   A  +E  
Sbjct: 174 MPGICLANNYISRDELLHTTAATLLYNSMTSKSERPQ------SEWIEALFRRAVDVEYN 227

Query: 59  YAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
           +  E   +G   ++      +++  A+R    +G+  ++     P       +   K  N
Sbjct: 228 FI-EARGRGVTNIDLKGIRDFLEATADRILGDLGMTAIYDTRPPP-DCPLTYMTSVKHTN 285

Query: 119 FFETRVTEYQQ 129
           FFE   +EY  
Sbjct: 286 FFEQENSEYTM 296


>gi|18466786|ref|NP_569593.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|16506102|emb|CAD09988.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Salmonella enterica subsp. enterica serovar Typhi str.
           CT18]
          Length = 380

 Score = 92.4 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 6/117 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW----TKEFQQKSRTMLHEATLLE 56
           + G  +  ++I RDE+LH      +I  ++     L       E +      + +    E
Sbjct: 227 LEGNTKIMRFIARDEALHCEGTERMIRFMRTGREGLMWKMIAAEEESFIYQTMMDVAGQE 286

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVI 111
           + +A      G  +GLNA   + Y+++  N    ++GL  LF +  ++P  WM++ +
Sbjct: 287 MRWADYLFKDGSMIGLNADILKSYVKYRTNLAMRRLGLRQLFPEIKDDPLVWMNKWL 343


>gi|330858746|ref|YP_004415121.1| putative ribonucleotide reductase B subunit [Shigella phage Shfl2]
 gi|327397680|gb|AEA73182.1| putative ribonucleotide reductase B subunit [Shigella phage Shfl2]
          Length = 389

 Score = 92.0 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q+++    +      +E +Q++  +  E    E
Sbjct: 234 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQE 293

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 294 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 352


>gi|53728876|ref|ZP_00348266.1| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207635|ref|YP_001052860.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae L20]
 gi|165975603|ref|YP_001651196.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|190149418|ref|YP_001967943.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303249851|ref|ZP_07336055.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|303251971|ref|ZP_07338142.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307247133|ref|ZP_07529185.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|307249355|ref|ZP_07531349.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|307251676|ref|ZP_07533581.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307253912|ref|ZP_07535764.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307256172|ref|ZP_07537959.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|307258366|ref|ZP_07540107.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|307260605|ref|ZP_07542297.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|307262736|ref|ZP_07544363.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
 gi|126096427|gb|ABN73255.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165875704|gb|ABY68752.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|189914549|gb|ACE60801.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649401|gb|EFL79586.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302651418|gb|EFL81570.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306856382|gb|EFM88533.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|306858649|gb|EFM90711.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|306860873|gb|EFM92881.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306863116|gb|EFM95058.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306865353|gb|EFM97249.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|306867550|gb|EFM99397.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306869682|gb|EFN01467.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|306871881|gb|EFN03598.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
          Length = 325

 Score = 92.0 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E +H  FGI +   ++ E+  L+T EF +  +T+  +A   E     
Sbjct: 183 KGISNAVEATSKEEEIHGKFGIALYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILD 242

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
               +G +  ++    E Y++   N     +GLEP +           W    I   KE 
Sbjct: 243 WIFEEGDLSFISREEVENYIRSRYNNSLMTLGLEPPYDVNPELLKETEWFDIEILSTKET 302

Query: 118 NFFETRVTEYQQ 129
           +FF  R T+Y +
Sbjct: 303 DFFNKRSTDYSK 314


>gi|322515075|ref|ZP_08068083.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
 gi|322118955|gb|EFX91132.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
          Length = 326

 Score = 92.0 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E +H  FGI +   ++ E+  L+T EF ++ +T+  +A   E     
Sbjct: 184 KGISNAVEATSKEEEIHGKFGIALYEILRDEHSELFTPEFFEELKTLSTQAFEAECGILD 243

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
               +G +  ++  + E Y++   N     +GLEP +           W    I   KE 
Sbjct: 244 WIFEEGDLSFISREAVENYIRSRYNNSLMTLGLEPPYDVNPELLKETEWFDIEILSTKET 303

Query: 118 NFFETRVTEYQQ 129
           +FF  R T+Y +
Sbjct: 304 DFFNKRSTDYSK 315


>gi|76803441|ref|YP_327710.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas
           pharaonis DSM 2160]
 gi|76559256|emb|CAI50863.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas
           pharaonis DSM 2160]
          Length = 336

 Score = 92.0 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 4/134 (2%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GIA   +   ++E +H  FG++++  I+ ENP L+ ++F+++ +     A   E+    
Sbjct: 194 KGIANAVEATSKEEQIHGLFGVELVETIREENPDLFDEDFEEEVQAACQRAFEAEMKILD 253

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
               +G +  L     + +++   N+    +G+EP+F+  +       W  E I + K+ 
Sbjct: 254 WIFGEGELEFLPRTHVDAFLRDRFNQSLENVGVEPIFEPDDGLLEETRWFDEDIMMTKDN 313

Query: 118 NFFETRVTEYQQGA 131
           +FF  R T Y + A
Sbjct: 314 DFFSKRSTTYNKHA 327


>gi|307244959|ref|ZP_07527056.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306854124|gb|EFM86332.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
          Length = 325

 Score = 92.0 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E +H  FGI +   ++ E+  L+T EF +  +T+  +A   E     
Sbjct: 183 KGISNAVEATSKEEEIHGKFGIVLYEILREEHSELFTPEFFEDLKTLSSQAFEAECGILD 242

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
               +G +  ++    E Y++   N     +GLEP +           W    I   KE 
Sbjct: 243 WIFEEGDLSFISREEVENYIRSRYNNSLMTLGLEPPYDVNPELLKETEWFDIEILSTKET 302

Query: 118 NFFETRVTEYQQ 129
           +FF  R T+Y +
Sbjct: 303 DFFNKRSTDYSK 314


>gi|228861159|ref|YP_002854182.1| ribonucleotide reductase B subunit [Enterobacteria phage RB51]
 gi|227438833|gb|ACP31145.1| ribonucleotide reductase B subunit [Enterobacteria phage RB51]
          Length = 392

 Score = 91.6 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q+++    +      KE +Q++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQLGTDGDEWVKIAKECEQEAVDIFMEVNRQE 296

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 297 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|32709431|gb|AAP86734.1| NrdB [Enterobacteria phage T2H]
          Length = 392

 Score = 91.6 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q+++    +      KE +Q++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQLGTDGDEWVKIAKECEQEAVDIFMEVNRQE 296

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 297 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|70937204|ref|XP_739440.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56516443|emb|CAH87750.1| hypothetical protein PC302623.00.0 [Plasmodium chabaudi chabaudi]
          Length = 72

 Score = 91.2 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 2/62 (3%)

Query: 74  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGL 133
               QY++F+A+R    +G   +F +++NPF WM  +I L+ + NFFE RV +YQ+   +
Sbjct: 1   RLMSQYIEFVADRLLECLGCSKVF-HSKNPFSWMD-LISLQGKTNFFEKRVADYQKSGVM 58

Query: 134 KW 135
             
Sbjct: 59  AQ 60


>gi|116326446|ref|YP_803166.1| ribonucleotide reductase B subunit [Enterobacteria phage RB32]
 gi|32709425|gb|AAP86731.1| NrdB [Enterobacteria phage RB32]
 gi|115344039|gb|ABI95048.1| ribonucleotide reductase B subunit [Enterobacteria phage RB32]
          Length = 392

 Score = 91.2 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++     +      +E +Q++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQE 296

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 297 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|299779174|ref|YP_003734368.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           IME08]
 gi|298105903|gb|ADI55547.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           IME08]
          Length = 389

 Score = 91.2 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q+++    +      +E +Q++  +  E    E
Sbjct: 234 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQE 293

Query: 57  IAYAHETMPKGF-VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  +   ++ ++   R  Q GL  P+    T +P+PW+ E ++
Sbjct: 294 KEWATHLFKDGTCPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 352


>gi|9632793|ref|NP_049841.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage T4]
 gi|1172940|sp|P11156|RIR2_BPT4 RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Protein B2; AltName: Full=Ribonucleotide
           reductase
 gi|5354417|gb|AAD42624.1|AF158101_211 NrdB aerobic NDP reductase, small subunit [Enterobacteria phage T4]
 gi|15342|emb|CAA27757.1| small subunit B2 [Enterobacteria phage T4]
 gi|299780589|gb|ADJ39951.1| aerobic NDP reductase small subunit [Enterobacteria phage T4T]
          Length = 388

 Score = 91.2 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++     +      +E +Q++  +  E    E
Sbjct: 233 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQE 292

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 293 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 351


>gi|238695377|ref|YP_002922570.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           JS10]
 gi|220029513|gb|ACL78447.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           JS10]
          Length = 379

 Score = 90.4 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q+++    +      +E +Q++  +  E    E
Sbjct: 224 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQE 283

Query: 57  IAYAHETMPKGF-VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  +   ++ ++   R  Q GL  P+    T +P+PW+ E ++
Sbjct: 284 KEWAGHLFKDGTCPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 342


>gi|161622513|ref|YP_001595352.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           JS98]
 gi|160213819|gb|ABX11158.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           JS98]
          Length = 379

 Score = 90.4 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q+++    +      +E +Q++  +  E    E
Sbjct: 224 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQE 283

Query: 57  IAYAHETMPKGF-VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  +   ++ ++   R  Q GL  P+    T +P+PW+ E ++
Sbjct: 284 KEWAAHLFKDGTCPGLNTQNMGAFVDYLTVSRMKQCGLPCPITDAPTRHPYPWIREYLN 342


>gi|32709433|gb|AAP86735.1| NrdB [Enterobacteria phage U5]
          Length = 391

 Score = 90.4 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK----IENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++     +      +E +Q++  +  E    E
Sbjct: 236 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDEWVKIAQECEQEAVDIFMEVNRQE 295

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 296 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 354


>gi|255535950|ref|YP_003096321.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Flavobacteriaceae bacterium 3519-10]
 gi|255342146|gb|ACU08259.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Flavobacteriaceae bacterium 3519-10]
          Length = 324

 Score = 90.4 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 4/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  ++    +   DE +H N GI +IN+I+ E P L T    +   T++  +  LE    
Sbjct: 181 MKNVSNIIAWTSVDEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDHSIELEAEIL 240

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKE 116
                 G    ++  +   +M++  +    +IG++  +  + +   P  W  E +     
Sbjct: 241 DWIFEMGEIDNVSKENLLNFMKYRVDDSLKKIGMQTRYNVSGDEYRPMVWFEEEVFANSM 300

Query: 117 KNFFETRVTEYQQ 129
            +FF  R  +Y +
Sbjct: 301 DDFFAKRPVDYTK 313


>gi|32709423|gb|AAP86730.1| NrdB [Enterobacteria phage RB27]
          Length = 392

 Score = 90.1 bits (223), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++            +E +Q++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQE 296

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 297 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|291290450|dbj|BAI83245.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           AR1]
          Length = 392

 Score = 90.1 bits (223), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++            +E +Q++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQE 296

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 297 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|228861541|ref|YP_002854562.1| ribonucleotide reductase B subunit [Enterobacteria phage RB14]
 gi|227438557|gb|ACP30870.1| ribonucleotide reductase B subunit [Enterobacteria phage RB14]
          Length = 392

 Score = 90.1 bits (223), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL----WTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q++            +E +Q++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQSGTDGDQWVKIAQECEQEAVDIFMEVNRQE 296

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A      G   GLN  S   ++ ++   R  Q GL  P+     ++P+PW+ E ++
Sbjct: 297 KDWAVHLFKDGDVPGLNTNSMWSFIDYLTVSRMKQCGLPCPITDAPVKHPYPWIREYLN 355


>gi|121730673|ref|ZP_01682814.1| ATP-dependent Zn proteases [Vibrio cholerae V52]
 gi|121627739|gb|EAX60372.1| ATP-dependent Zn proteases [Vibrio cholerae V52]
          Length = 129

 Score = 90.1 bits (223), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 7/110 (6%)

Query: 25  VINQIKIENPHL----WTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNAPSCEQY 79
           ++N ++            +E +Q+S  +  EA   E  +A      G  +GLN     QY
Sbjct: 1   MLNLLRNGMDDFTFLQVAEECKQESFDLFKEAAEQEKEWAEYLFKDGSMIGLNKDILCQY 60

Query: 80  MQFIANRRCHQIGLEPLFK-YTENPFPWMS-EVIDLKKEKNFFETRVTEY 127
           +++I N R   +GLEP +   T NP PW++  +     +    E  ++ Y
Sbjct: 61  VEYITNIRMQAVGLEPAYPAATNNPIPWINAWLSSDNVQVAPQEAEISSY 110


>gi|326336655|ref|ZP_08202823.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325691125|gb|EGD33096.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 319

 Score = 90.1 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 5/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  +A    +   DE +H N GI ++  I  ENP   TK  ++++   + E  LLE    
Sbjct: 177 MKNVANIIAWTSIDEQVHANAGIYILKTIFEENPEFRTKA-KEEATQFIREYILLEDKML 235

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKE 116
                +G +          YM++  +    Q+ L   F  T     P  W  E + + + 
Sbjct: 236 DWIFEEGELDFFTKKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNEL 295

Query: 117 KNFFETRVTEYQQ 129
            +FF  R T Y +
Sbjct: 296 DDFFAKRPTAYTK 308


>gi|257464834|ref|ZP_05629205.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor 202]
 gi|257450494|gb|EEV24537.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor 202]
          Length = 326

 Score = 89.7 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E +H  FGI +   ++ E+  L+T  F ++ +T+ ++A   E     
Sbjct: 184 KGISNAVEATSKEEEIHGKFGIALYEILRDEHSELFTPAFFEELQTLANQAFEAEKGILD 243

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
               +G +  ++  +   Y++   N     +GLEP             W    I   KE 
Sbjct: 244 WIFEEGDLSFISKETVLNYIKSRYNNSLVTLGLEPPHNINPELLKETAWFDIEILSTKET 303

Query: 118 NFFETRVTEYQQ 129
           +FF  R T+Y +
Sbjct: 304 DFFNKRSTDYSK 315


>gi|312130784|ref|YP_003998124.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132]
 gi|311907330|gb|ADQ17771.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132]
          Length = 324

 Score = 89.7 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 4/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  ++    +   DE +H N GI ++N I+ E P  +  E   +    + E+  +E    
Sbjct: 181 MKNVSNIIAWTSVDEQIHANGGIYIVNTIRDEFPDFFDPETITQIEDTVRESIEVEERIL 240

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKE 116
                +G    +       +M+F  +    +IG  PLF  +     P  W  E +     
Sbjct: 241 DWIFSEGEIEIIKKKDLLNFMKFRIDDSMKKIGFSPLFHVSSADYQPIAWFEEEVFANSL 300

Query: 117 KNFFETRVTEYQQ 129
            +FF  R  +Y +
Sbjct: 301 DDFFAKRPVDYTK 313


>gi|282599256|ref|YP_003358568.1| NrdB ribonucleotide reductase subunit beta [Shigella phage
           phiSboM-AG3]
 gi|226973562|gb|ACO94315.1| NrdB ribonucleotide reductase subunit beta [Shigella phage
           phiSboM-AG3]
          Length = 367

 Score = 89.3 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENP--HLWTKEFQQKSRTMLHEATLLEIA 58
           M G A+  + I RDE  HL     ++N++   +P   +  +E + +   M  +    E  
Sbjct: 220 MEGNAKIIRQIARDEQDHLILTQTLLNRLPGMDPDFEIIREELRGEMTQMFLDVGNQEKQ 279

Query: 59  YAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVID 112
           +A      G  +GLNA      + ++   R   IG   P     E P PW++E ++
Sbjct: 280 WADYLFQDGSMLGLNAKILHHMVDWLLTHRMGAIGHPYPGEPRKECPVPWINEWLN 335


>gi|325955614|ref|YP_004239274.1| ribonucleotide reductase [Weeksella virosa DSM 16922]
 gi|323438232|gb|ADX68696.1| ribonucleotide reductase [Weeksella virosa DSM 16922]
          Length = 324

 Score = 89.3 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 4/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  ++    +   DE +H N GI ++N+IK E P  +++E  Q+ + ++  +  +E    
Sbjct: 181 MKNVSNIIAWTSVDEQIHANAGIYIVNKIKEEFPDFFSEETIQEIKNVVTHSIEVESQIL 240

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKE 116
                +G    +       +M++  +    +IG   ++  T     P  W  E +     
Sbjct: 241 DWIFEQGEIETIKKKDLLNFMKYRVDESMLKIGFGKIYNITAEQYQPMVWFEEEVFANSL 300

Query: 117 KNFFETRVTEYQQ 129
            +FF  R  +Y +
Sbjct: 301 DDFFAKRPVDYTK 313


>gi|319954718|ref|YP_004165985.1| ATP-cone domain protein [Cellulophaga algicola DSM 14237]
 gi|319423378|gb|ADV50487.1| ATP-cone domain protein [Cellulophaga algicola DSM 14237]
          Length = 424

 Score = 89.3 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G++   +   ++E +H +FGID+I  IK ENP  +  ++ +  + M  +A + E +  
Sbjct: 281 LKGVSNVVEATSKEEQIHGDFGIDIIKIIKKENPDWFDADYHKTIQQMCKDAFIAESSVV 340

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKE 116
                KG +  L      ++++   N     IG+E +F+  E       W  + I   K 
Sbjct: 341 DWIFEKGELDFLPKDVVNEFIKNRFNNSLESIGIEKIFEVNEELIAETEWFDDEIIGTKH 400

Query: 117 KNFFETRVTEYQQGA 131
            +FF  R   Y +  
Sbjct: 401 GDFFVKRSINYSKRT 415


>gi|240950330|ref|ZP_04754600.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor NM305]
 gi|240295141|gb|EER45960.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor NM305]
          Length = 326

 Score = 88.9 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E +H  FGI +   ++ E+  L+T  F ++ +T+  +A   E     
Sbjct: 184 KGISNAVEATSKEEEIHGKFGIALYEILRDEHSELFTPAFFEELQTLASQAFEAEKGILD 243

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
               +G +  ++  +   Y++   N     +GLEP             W    I   KE 
Sbjct: 244 WIFEEGDLSFISKETVLNYIKSRYNNSLVTLGLEPPHDINPELLKETAWFDIEILSTKET 303

Query: 118 NFFETRVTEYQQ 129
           +FF  R T+Y +
Sbjct: 304 DFFNKRSTDYSK 315


>gi|149392653|gb|ABR26129.1| ribonucleoside-diphosphate reductase small chain [Oryza sativa
           Indica Group]
          Length = 233

 Score = 88.5 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + + ++ +           + + ++ +A  +E  + 
Sbjct: 171 MPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDE-------SRVQEIVADAVDIEREFV 223

Query: 61  HETMPKGFVG 70
            + +P   VG
Sbjct: 224 CDALPVALVG 233


>gi|254362523|ref|ZP_04978626.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica PHL213]
 gi|153094123|gb|EDN75022.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica PHL213]
          Length = 293

 Score = 88.5 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E +H  FGI +   ++ E+  L+T EF +  +T+ ++A   E     
Sbjct: 151 KGISNAVEATSKEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILD 210

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
               +G +  +   + E Y++   N     +GLEP             W    I   KE 
Sbjct: 211 WIFEEGDLSFITKATVENYIKNRYNNSLSILGLEPPHDIDPELLKETEWFDIEILSTKET 270

Query: 118 NFFETRVTEYQQ 129
           +FF  R T+Y +
Sbjct: 271 DFFNKRSTDYSK 282


>gi|261494146|ref|ZP_05990649.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261310312|gb|EEY11512.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 325

 Score = 88.5 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E +H  FGI +   ++ E+  L+T EF +  +T+ ++A   E     
Sbjct: 183 KGISNAVEATSKEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILD 242

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
               +G +  +   + E Y++   N     +GLEP             W    I   KE 
Sbjct: 243 WIFEEGDLSFITKATVENYIKNRYNNSLSILGLEPPHDIDPELLKETEWFDIEILSTKET 302

Query: 118 NFFETRVTEYQQ 129
           +FF  R T+Y +
Sbjct: 303 DFFNKRSTDYSK 314


>gi|167856024|ref|ZP_02478769.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus
           parasuis 29755]
 gi|219871494|ref|YP_002475869.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           parasuis SH0165]
 gi|167852863|gb|EDS24132.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus
           parasuis 29755]
 gi|219691698|gb|ACL32921.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parasuis SH0165]
          Length = 325

 Score = 88.5 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E +H  FGI +   +  E+  L+T EF ++ +T+  +A   E     
Sbjct: 183 KGISNAVEATSKEEEIHGRFGIALYEILSDEHSELFTPEFFEELKTLSQQAFEAERGILD 242

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
               +G +  ++  + E Y+    N     +GLEP +           W    I   KE 
Sbjct: 243 WIFEEGDLSFISRKTVENYIMNRYNNSLSILGLEPPYDVDPELLKETEWFDIEIISTKET 302

Query: 118 NFFETRVTEYQQ 129
           +FF  R T+Y +
Sbjct: 303 DFFNKRSTDYSK 314


>gi|207108882|ref|ZP_03243044.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPKX_438_CA4C1]
          Length = 79

 Score = 88.1 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KN 118
                    +GL +   EQY+QF+A+ R  ++G+  ++   ++P  W+       ++  N
Sbjct: 2   GDYITQGKILGLTSSLIEQYIQFLADSRLSKVGIAKVY-GVQHPIKWVESFSSFNEQRSN 60

Query: 119 FFETRVTEYQQGAGLKWD 136
           FFE RV+ Y +G+    D
Sbjct: 61  FFEARVSNYAKGSVSFDD 78


>gi|228473186|ref|ZP_04057941.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275336|gb|EEK14128.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 319

 Score = 87.4 bits (216), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 5/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  +A    +   DE +H N GI ++  I  ENP   TK  ++++   + E  LLE    
Sbjct: 177 MKNVANIIAWTSVDEQVHANAGIYILKTIFDENPEFRTKA-KKEATEFIREYILLEDKML 235

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKE 116
                +G +   +      YM++  +    Q+ L   F  T     P  W  E + + + 
Sbjct: 236 DWIFEEGELEFFSKKDLANYMRYRLDDALTQLDLGKPFGITAEEAKPMLWFEEEVFVNEL 295

Query: 117 KNFFETRVTEYQQ 129
            +FF  R T Y +
Sbjct: 296 DDFFAKRPTAYTK 308


>gi|83642896|ref|YP_438184.1| ORF60 [Ovine herpesvirus 2]
 gi|61971010|gb|AAX58095.1| ORF60 [Ovine herpesvirus 2]
 gi|78127895|gb|ABB22279.1| ribonucleotide-reductase small subunit-like protein [Ovine
           herpesvirus 2]
          Length = 305

 Score = 87.0 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 48/135 (35%), Gaps = 18/135 (13%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+     YI RDE LH      + N +  +      K  +     +  EA  +E  + 
Sbjct: 177 MPGVCMANDYISRDELLHTRAAALLYNTVIPQEG----KPSEAWIIDLFKEAVSIEDEFI 232

Query: 61  HETMPKGFVGL-NAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKE 116
                 G VG  N     ++++  A+R  + IGL   F        P  +          
Sbjct: 233 R--AKSGEVGFVNVADIRRFLEATADRLLNSIGLPVHFKSEPPKSCPLTY------TGCI 284

Query: 117 KN--FFETRVTEYQQ 129
           KN  FFE   TEY  
Sbjct: 285 KNVSFFERESTEYST 299


>gi|311993225|ref|YP_004010091.1| aerobic NDP reductase, small subunit [Enterobacteria phage CC31]
 gi|284178063|gb|ADB81729.1| aerobic NDP reductase, small subunit [Enterobacteria phage CC31]
          Length = 379

 Score = 87.0 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLE 56
           M G ++  ++I RDE LHL     +I Q+++    E      +E +Q++  +  E    E
Sbjct: 224 MEGNSKIMKFIARDEQLHLKGTQYIIRQLQLGTDGEEWVQIARECEQEAVDIFMEINRQE 283

Query: 57  IAYAHETMPK-GFVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPFPWMSEVID 112
             +A       G  GL+      ++ ++   R    GL  P+      +P PW+ E ++
Sbjct: 284 KEWAVHLWRDGGVPGLSVKILHDFIDYLTVSRMRSCGLPCPITDAPVRHPIPWIREYLN 342


>gi|261496013|ref|ZP_05992423.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261308263|gb|EEY09556.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. OVINE]
          Length = 325

 Score = 86.6 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E +H  FGI +   ++ E+  L+T EF +  +T+ ++A   E     
Sbjct: 183 KGISNAVEATSKEEEIHGKFGIALYEILRDEHSELFTPEFFEDLQTLANQAFEAERGILD 242

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
               +G +  +   + E Y++   N     +GLEP             W    I   KE 
Sbjct: 243 WIFEEGDLSFITKATVENYIKNRYNNSLSILGLEPPHDIDPEFLKETEWFDIEILSTKET 302

Query: 118 NFFETRVTEYQQ 129
           +FF  R T+Y +
Sbjct: 303 DFFNKRSTDYSK 314


>gi|167957419|ref|ZP_02544493.1| ribonucleotide-diphosphate reductase subunit beta [candidate
           division TM7 single-cell isolate TM7c]
          Length = 277

 Score = 86.6 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 11/89 (12%)

Query: 1   MVGIAE-----------QYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTML 49
           MVG++               ++ RDE+LHL FGI+++  I  ENP L   EF  + R ++
Sbjct: 189 MVGMSFRRRNLLRNVGTLLDWVTRDENLHLEFGINLLLTILHENPDLQDPEFADEIRNLI 248

Query: 50  HEATLLEIAYAHETMPKGFVGLNAPSCEQ 78
            +A  LE AY  + +P G +GLNA    Q
Sbjct: 249 LQAVELEEAYNRDMLPNGILGLNADYVNQ 277


>gi|300776394|ref|ZP_07086252.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC
           35910]
 gi|300501904|gb|EFK33044.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC
           35910]
          Length = 371

 Score = 86.2 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 4/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  ++    +   DE +H N GI +IN+I+ E P L T    +   T++ E+   E    
Sbjct: 228 MKNVSNIIAWTSVDEQIHANAGIYLINKIREEQPDLLTDSDIEDIYTLVDESIAREGDIL 287

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKE 116
                 G    ++      +M++  +    +I ++  +  T     P  W  E +     
Sbjct: 288 SWIFELGEIDNVSKEDLLNFMKYRVDDSLKKINMKTRYNITPEQYRPMVWFEEEVFANSL 347

Query: 117 KNFFETRVTEYQQ 129
            +FF  R  +Y +
Sbjct: 348 DDFFAKRPVDYTK 360


>gi|18653874|ref|NP_570808.1| small ribonucleotide reductase [Macacine herpesvirus 5]
 gi|4494972|gb|AAD21394.1| small ribonucleotide reductase [Macaca mulatta rhadinovirus 17577]
          Length = 314

 Score = 85.4 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 46/131 (35%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+     YI RDE LH      + N +   +              +  EA  +E  + 
Sbjct: 187 MRGVCLANDYISRDELLHTRAASLLYNTMISRD----ESPSVAYIHGLFREAVEIETLFI 242

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNF 119
                +    +N    EQ++Q  A+R    I + PLF     N  P        K   NF
Sbjct: 243 RSK-SRDVTMVNVGDIEQFLQATADRILKSINIPPLFGARPPNACP--LSYTSAKSV-NF 298

Query: 120 FETRVTEYQQG 130
           FE   +EY   
Sbjct: 299 FERDNSEYVTS 309


>gi|7330057|gb|AAF60046.1|AF210726_67 small ribonuclease reductase [Rhesus monkey rhadinovirus H26-95]
          Length = 304

 Score = 85.4 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 46/131 (35%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+     YI RDE LH      + N +   +              +  EA  +E  + 
Sbjct: 177 MRGVCLANDYISRDELLHTRAASLLYNTMISRD----ESPSVAYIHGLFREAVEIETLFI 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNF 119
                +    +N    EQ++Q  A+R    I + PLF     N  P        K   NF
Sbjct: 233 RSK-SRDVTMVNVGDIEQFLQATADRILKSINIPPLFGARPPNACP--LSYTSAKSV-NF 288

Query: 120 FETRVTEYQQG 130
           FE   +EY   
Sbjct: 289 FERDNSEYVTS 299


>gi|46519447|gb|AAT00095.1| JM118 [Macaca fuscata rhadinovirus]
          Length = 314

 Score = 85.4 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 47/131 (35%), Gaps = 9/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+     YI RDE LH      + N +   +              +  EA  +E  + 
Sbjct: 187 MRGVCLANDYISRDELLHTRAAGLLYNTMISRD----ESPSVAYIHGLFREAVEIETLFI 242

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKNF 119
                +G   +N    EQ++Q  A+R    I + PLF     N  P        K   NF
Sbjct: 243 RSK-SRGVTMVNVGDIEQFLQATADRILKSINVPPLFGARPPNACP--LSYTSAKSV-NF 298

Query: 120 FETRVTEYQQG 130
           FE   +EY   
Sbjct: 299 FERDNSEYVTS 309


>gi|313206313|ref|YP_004045490.1| ribonucleotide reductase [Riemerella anatipestifer DSM 15868]
 gi|312445629|gb|ADQ81984.1| ribonucleotide reductase [Riemerella anatipestifer DSM 15868]
 gi|315023179|gb|EFT36190.1| ribonucleotide reductase [Riemerella anatipestifer RA-YM]
 gi|325336242|gb|ADZ12516.1| ribonucleoside-diphosphate reductase beta chain [Riemerella
           anatipestifer RA-GD]
          Length = 324

 Score = 85.1 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 4/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  ++    +   DE +H N GI +IN+IK E P L  +E  +    ++  +  LE    
Sbjct: 181 MKNVSNIIAWTSVDEQIHANAGIYIINKIKEEQPELLQEEDIEAIYNIVKTSVELEAEIL 240

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN---PFPWMSEVIDLKKE 116
                 G +  L+      +M++  +    +IG+  +F  TE    P  W  E +     
Sbjct: 241 DWIFEMGDLDHLSKKQLLSFMKYRIDDSLKRIGMASMFNITEEEYKPMVWFEEEVFANSL 300

Query: 117 KNFFETRVTEYQQ 129
            +FF  R  +Y +
Sbjct: 301 DDFFAKRPVDYTK 313


>gi|48696741|ref|YP_024565.1| ORF20 [Ostreid herpesvirus 1]
 gi|81986458|sp|Q6R7K3|RIR2_OSHVF RecName: Full=Ribonucleoside-diphosphate reductase small chain
 gi|41352405|gb|AAS00912.1| ORF20 [Ostreid herpesvirus 1]
          Length = 579

 Score = 84.7 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 63/134 (47%), Gaps = 13/134 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  +    ++I RDE+LH  F  +++         +  +   ++   +L EAT +E+ +A
Sbjct: 244 MRALVLGNEFIRRDETLHFRFYAELLRL-------MPDRPSDERIAELLTEATEIELEFA 296

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKK 115
              +P+G   +      Q+++   N+ C  + + P++   +     +P  +M+ +   +K
Sbjct: 297 EYVVPEGVKYITKDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNTLESEQK 356

Query: 116 EKNFFETRVTEYQQ 129
             NFFE + TEY  
Sbjct: 357 I-NFFEGKATEYNT 369


>gi|284504289|ref|YP_003407004.1| ribonucleotide reductase small chain [Marseillevirus]
 gi|282935727|gb|ADB04042.1| ribonucleotide reductase small chain [Marseillevirus]
          Length = 280

 Score = 84.7 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 3/130 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+ +  ++I +DE+LH  F   V     ++    + +  Q++ + +L  A      + 
Sbjct: 141 LKGLRKANEWISKDEALHQRFAEAVYR-YIVDVIKAFPRVSQERVQEILGSAIDAVSPFI 199

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
           H+ +    V ++A     YM+  A+     +G E  F        +M  +I +  + NFF
Sbjct: 200 HDCLRFKNVNIDAERMIGYMKNAADGLAFSLGYEKFFNSDS-SLDYML-LIGMDNKTNFF 257

Query: 121 ETRVTEYQQG 130
           E  V +Y +G
Sbjct: 258 EEVVADYAKG 267


>gi|294505968|ref|YP_003570026.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter
           ruber M8]
 gi|294342296|emb|CBH23074.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter
           ruber M8]
          Length = 324

 Score = 84.7 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            G+A   +   ++E +H  FG++++N I+ E+P  +   F+Q+ R    EA   E     
Sbjct: 182 KGVANAVEATSKEEQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLD 241

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEK 117
                G +  L  P  + +++   N     + ++P+F+          W  E I L K  
Sbjct: 242 WIFADGELDFLPRPVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEILLTKGN 301

Query: 118 NFFETRVTEYQQ 129
           +FF  R T Y +
Sbjct: 302 DFFSKRSTSYSK 313


>gi|146301802|ref|YP_001196393.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101]
 gi|146156220|gb|ABQ07074.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101]
          Length = 324

 Score = 84.7 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 4/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  ++    +   DE +H N GI +IN+I+ E P  + +E     R  + ++  +E    
Sbjct: 181 MKNVSNIIAWTSIDEQIHANGGIYIINKIREEFPDYFDEETLALVRETVKDSIAVESDIL 240

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKE 116
                +G    +       +M+F  +    QI +  +F      +    W  E +     
Sbjct: 241 DWIFEEGEIESIKKGDLVNFMKFRIDESLKQINIPVIFDVKVEDYKALAWFEEEVFANSL 300

Query: 117 KNFFETRVTEYQQ 129
            +FF  R  EY +
Sbjct: 301 DDFFAKRPVEYTK 313


>gi|256820037|ref|YP_003141316.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271]
 gi|315225453|ref|ZP_07867266.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea
           F0287]
 gi|256581620|gb|ACU92755.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271]
 gi|314944551|gb|EFS96587.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea
           F0287]
          Length = 319

 Score = 84.3 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 5/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +  +A    +   DE LH N GI ++ +I  ENP +  K  ++ + T +     LE    
Sbjct: 177 LKNVANIIAWTSVDEQLHANAGIYILKKIFEENPEMKAKA-EEDATTFIRSYITLEDKML 235

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKE 116
                +G +   +      YM++  +    Q+GL   F  +     P  W  E +   + 
Sbjct: 236 DWIFEQGELEFFSKKDLSNYMRYRLDDSLTQLGLGKPFGISGEEAKPMMWFEEEVFSNEL 295

Query: 117 KNFFETRVTEYQQ 129
            +FF  R T Y +
Sbjct: 296 DDFFAKRPTAYTK 308


>gi|30348565|emb|CAC84357.1| RRsmall [Saimiriine herpesvirus 2]
          Length = 305

 Score = 83.5 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 50/139 (35%), Gaps = 14/139 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI     YI RDE LH +    + N +         +  +     +  EA  +E  + 
Sbjct: 177 MNGICLANDYIARDEMLHTSAAALLYNTMTK----SSERPSEDWIYKLFREAVEVEFKFI 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TEN-PFPWMSEVIDLKKEK 117
                 G   +N     Q++Q  A+R    I L P++     EN P           K  
Sbjct: 233 A-AKGHGVSLVNVHEIRQFLQATADRILESINLNPIYGSLPPENCPL----AYTSSTKSV 287

Query: 118 NFFETRVTEYQQGAGLKWD 136
           NFFE   ++Y     L  D
Sbjct: 288 NFFERDNSDYT--GTLTND 304


>gi|10140982|ref|NP_065559.1| ribonucleotide-reductase, small subunit [Alcelaphine herpesvirus 1]
 gi|81984051|sp|O36410|RIR2_ALHV1 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2338023|gb|AAC58107.1| ribonucleotide-reductase, small subunit [Alcelaphine herpesvirus 1]
          Length = 305

 Score = 83.5 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 10/130 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+     YI RDE LH      + N +  +      +   +   ++  EA  +E A+ 
Sbjct: 177 MPGVCMANDYISRDELLHTRAAALLYNTMIPKE----ERPSSEWVVSLFKEAVEIECAFI 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN-- 118
                K    ++      +++  A+R  + I L   +K      P    +      KN  
Sbjct: 233 EAKT-KQVTFVSMDDIRAFLEATADRLLNSIELPRYYKSDP---PQSCPLTYTGCIKNVS 288

Query: 119 FFETRVTEYQ 128
           FFE   TEY 
Sbjct: 289 FFERESTEYS 298


>gi|88801652|ref|ZP_01117180.1| ribonucleoside-diphosphate reductase, beta subunit [Polaribacter
           irgensii 23-P]
 gi|88782310|gb|EAR13487.1| ribonucleoside-diphosphate reductase, beta subunit [Polaribacter
           irgensii 23-P]
          Length = 424

 Score = 83.1 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 4/135 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + GI+   +   ++E +H +FGID+I  IK ENP  + ++     + M  EA + E    
Sbjct: 281 LKGISNVVEATSKEEQIHGDFGIDIIKIIKEENPDWFDEDHSLMVQEMCEEAFISESKII 340

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKE 116
                KG +  L     +++++   N+    IG+  +F+          W  + I   K 
Sbjct: 341 DWIFEKGELDFLPKNVIKEFIKNRFNKSLGSIGIAKIFEIDATLLAQTDWFDDEIIGTKH 400

Query: 117 KNFFETRVTEYQQGA 131
            +FF  R   Y +  
Sbjct: 401 GDFFVKRSINYSKRT 415


>gi|83814991|ref|YP_444284.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter
           ruber DSM 13855]
 gi|83756385|gb|ABC44498.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter
           ruber DSM 13855]
          Length = 324

 Score = 83.1 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            G+A   +   ++E +H  FG++++N I+ E+P  +   F+Q+ R    EA   E     
Sbjct: 182 KGVANAVEATSKEEQIHGLFGVELMNIIREEHPEWFGPAFEQEVRAACEEAYDAEQKVLD 241

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEK 117
                G +  L  P  + +++   N     + ++P+F+          W  E + L K  
Sbjct: 242 WIFADGELDFLPRPVVDAFLRDKFNESLKNVDVDPIFEVDPEHLGETRWFYEEVLLTKGN 301

Query: 118 NFFETRVTEYQQ 129
           +FF  R T Y +
Sbjct: 302 DFFSKRSTSYSK 313


>gi|213962351|ref|ZP_03390614.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           sputigena Capno]
 gi|213955017|gb|EEB66336.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           sputigena Capno]
          Length = 319

 Score = 82.7 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 5/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +  +A    +   DE LH N GI ++ +I  E P + T   + ++   +    LLE    
Sbjct: 177 LKNVANIIAWTSIDEQLHANAGIYILKKIFEERPEMKTIA-EHEATNFIRNYILLEDKML 235

Query: 61  HETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKE 116
                +G +   +      YM++  +    Q+GL+  F  +     P  W  E +   + 
Sbjct: 236 DWIFEQGELEFFSKKDLANYMRYRLDDSLTQLGLDKPFNISGDEAKPMMWFEEEVFSNEL 295

Query: 117 KNFFETRVTEYQQ 129
            +FF  R T Y +
Sbjct: 296 DDFFAKRPTAYTK 308


>gi|168702485|ref|ZP_02734762.1| ribonucleotide-diphosphate reductase small chain [Gemmata
           obscuriglobus UQM 2246]
          Length = 70

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%)

Query: 68  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 127
             GL+      Y ++ A+RR   +G+ P+F  T+NPF +M  + D+++  NFFE RV+ Y
Sbjct: 1   MAGLSCRDLRSYPEYAADRRLESLGIAPVF-GTKNPFGFMD-LQDVQELTNFFERRVSAY 58

Query: 128 QQG 130
           Q G
Sbjct: 59  QLG 61


>gi|139472853|ref|YP_001129417.1| ORF60 [Human herpesvirus 8]
 gi|1718316|gb|AAC57145.1| ORF 60 [Human herpesvirus 8 type M]
 gi|2246534|gb|AAB62659.1| ORF 60 [Human herpesvirus 8]
 gi|87196889|gb|ABD28915.1| ORF60 [Human herpesvirus 8]
 gi|261853541|gb|ACY00463.1| ORF60 [Human herpesvirus 8]
 gi|312275208|gb|ADQ57945.1| core gene UL40 family protein [Human herpesvirus 8]
          Length = 305

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 12/132 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+     YI RDE LH      + N +      +  K    + + +  EA  +EI + 
Sbjct: 177 MPGVCLANDYISRDELLHTKAASMLYNTMV----EIQEKPSHAEVQALFREAVNIEIRFI 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
                 G   +N     ++++  A+R    I + P+F        P  +        K  
Sbjct: 233 Q-AKAAGVTLVNVVDIRRFLEATADRILRDIFVPPIFGTPPPEACPLSYTGSF----KAV 287

Query: 118 NFFETRVTEYQQ 129
           NFFE   ++Y  
Sbjct: 288 NFFERDNSDYTT 299


>gi|314121808|ref|YP_004063927.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           vB_EcoM-VR7]
 gi|313151565|gb|ADR32621.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           vB_EcoM-VR7]
          Length = 392

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     ++ Q++   +   W K   E + ++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYILRQLQTGVDGDEWVKIAHECEAEAAAIFMEVNRQE 296

Query: 57  IAYAHETMPK-GFVGLNAPSCEQYMQFIANRRCHQIGL--EPLFKYTENPFPWMSEVID 112
             +A       G  GL+     +++ ++   R  Q GL  E + + T++P PW+ E ++
Sbjct: 297 KEWAVHLFKDGGLPGLSVEILNRFIDYLTVSRMKQCGLPCEIVLESTKHPIPWIREYLN 355


>gi|308814593|ref|YP_003934867.1| ribonucleotide reductase B subunit [Shigella phage SP18]
 gi|308206185|gb|ADO19584.1| ribonucleotide reductase B subunit [Shigella phage SP18]
          Length = 392

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE-NPHLWTK---EFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     ++ Q++   +   W K   E + ++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYILRQLQTGVDGDEWVKIAHECEAEAAAIFMEVNRQE 296

Query: 57  IAYAHETMPK-GFVGLNAPSCEQYMQFIANRRCHQIGL--EPLFKYTENPFPWMSEVID 112
             +A       G  GL+     +++ ++   R  Q GL  E + + T++P PW+ E ++
Sbjct: 297 KEWAVHLFKDGGLPGLSVEILNRFIDYLTVSRMKQCGLPCEIVLESTKHPIPWIREYLN 355


>gi|9626016|ref|NP_040262.1| ribonucleotide reductase, small subunit [Saimiriine herpesvirus 2]
 gi|266917|sp|Q01038|RIR2_SHV21 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|66391|pir||WMBEP5 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain -
           saimiriine herpesvirus 1 (strain 11)
 gi|60381|emb|CAA45683.1| ribonucleotide reductase, small subunit [Saimiriine herpesvirus 2]
 gi|330989|gb|AAA46136.1| ribonucleotide reductase small subunit [Saimiriine herpesvirus 2]
          Length = 305

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 50/139 (35%), Gaps = 14/139 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI     YI RDE LH +    + N +         +  +     +  EA  +E  + 
Sbjct: 177 MNGICLANDYIARDEMLHTSAAALLYNTMTK----SSERPSEDWIYKLFREAVEVEFKFI 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY--TEN-PFPWMSEVIDLKKEK 117
                 G   +N     Q++Q  A+R    I L P++     EN P           K  
Sbjct: 233 A-AKGYGVSLVNVHEIRQFLQATADRILESINLNPIYGSLPPENCPL----AYTSSTKSV 287

Query: 118 NFFETRVTEYQQGAGLKWD 136
           NFFE   ++Y     L  D
Sbjct: 288 NFFERDNSDYT--GTLTND 304


>gi|311992967|ref|YP_004009834.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage
           Acj61]
 gi|295815256|gb|ADG36182.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage
           Acj61]
          Length = 377

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 7/121 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G ++   +I RDE+LH      +I +++   E P      +E ++++  +       E
Sbjct: 220 MEGNSKIMTFIARDENLHHQGTRYMIKRLQSGEEGPEWIKIAEECREEATNIFLATNEQE 279

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE--PLFKYTENPFPWMSEVIDL 113
             +       G   GL+      Y+ +    R +++GL+   +     NPFPW+++ +  
Sbjct: 280 KEWCKYVYQSGAPQGLSVGLVSDYIDYATVPRMNELGLDSSSIVAPKRNPFPWLTKFLKS 339

Query: 114 K 114
            
Sbjct: 340 N 340


>gi|9628063|ref|NP_042657.1| ribonucleotide reductase, small subunit [Equid herpesvirus 2]
 gi|82013696|sp|Q66662|RIR2_EHV2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|695233|gb|AAC13848.1| ribonucleotide reductase, small subunit [Equid herpesvirus 2]
          Length = 305

 Score = 82.0 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+     YI RDE +H      + N +  +      K   +    +  EA  +E  + 
Sbjct: 177 MNGVCMANDYISRDEWVHTRAAALLFNTLVPDE----EKPSPEWIGALFREAVEVEYNFI 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-FPWMSEVIDLKKEKNF 119
                +G   +N     ++++  A+R    I + P++     P  P +       K  NF
Sbjct: 233 -LAKGRGVSHVNVADINRFLEATADRILKSINVGPVYGTQPPPNCPLV--YTGCLKNVNF 289

Query: 120 FETRVTEYQQG 130
           FE   ++Y   
Sbjct: 290 FERESSDYTTA 300


>gi|326483608|gb|EGE07618.1| hypothetical protein TEQG_06532 [Trichophyton equinum CBS 127.97]
          Length = 317

 Score = 81.6 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+    + I RDE LH +F   + +       HL  +        ++ EA  +E  + 
Sbjct: 260 MPGLTFSNELISRDEGLHTDFACLLFS-------HLNYRPDPNAVEAIITEAVTIEQEFL 312

Query: 61  HETMP 65
            + +P
Sbjct: 313 TDALP 317


>gi|9631250|ref|NP_048031.1| small subunit of ribonucleotide reductase [Ateline herpesvirus 3]
 gi|4019286|gb|AAC95584.1| small subunit of ribonucleotide reductase [Ateline herpesvirus 3]
          Length = 305

 Score = 80.8 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 12/131 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M GI     YI RDE LH +    + N +         +  ++    +  EA  +E  + 
Sbjct: 177 MNGICLANDYIARDEMLHTSAAALLYNTMTK----PSERPPEKWIYELFREAVEVEFKFI 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF---KYTENPFPWMSEVIDLKKEK 117
              +  G   +N     Q++Q  A+R    I L P++        P           K  
Sbjct: 233 SAKV-HGVSHVNVHEIRQFLQATADRILESINLNPIYHSVPPANCPL----VYTSSTKSV 287

Query: 118 NFFETRVTEYQ 128
           NFFE   ++Y 
Sbjct: 288 NFFERDNSDYT 298


>gi|258544274|ref|ZP_05704508.1| ribonucleoside-diphosphate reductase, beta subunit [Cardiobacterium
           hominis ATCC 15826]
 gi|258520512|gb|EEV89371.1| ribonucleoside-diphosphate reductase, beta subunit [Cardiobacterium
           hominis ATCC 15826]
          Length = 325

 Score = 79.7 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E +H  FGI +   I+ E+P L+T +F  + + + + A   E     
Sbjct: 183 KGISNAVEATSKEEEIHGRFGIALYGIIRDEHPRLFTPDFYDELQQLANHALEAERGILR 242

Query: 62  ETMPKGFVG-LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEK 117
                G +  +   + E Y+    N     +G+   +           W    I   KE 
Sbjct: 243 WIFEDGDLDFITLDTVENYITNRYNNSLEILGINAPYLVDTKKLRETEWFDIEILSGKEG 302

Query: 118 NFFETRVTEYQQ 129
           +FF  R T+Y +
Sbjct: 303 DFFYKRSTDYSK 314


>gi|321496611|ref|YP_004207896.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru]
 gi|320332513|gb|ADW24401.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru]
 gi|320332596|gb|ADW24483.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru]
          Length = 307

 Score = 78.9 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G+     YI RDE LH      + N +   +     K        +  EA  +EI +  E
Sbjct: 181 GVCLANDYISRDELLHTRAAALLYNTLVDPDR----KPPVHWIHNLFREAVDVEIRFIRE 236

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNF 119
              +G   +N      +++  A+R   QI L  L+     +  P  + + V ++    NF
Sbjct: 237 R-GRGVTAVNIEDIISFLKATADRMLTQIKLPILYGELAPSGCPLAFNACVKNI----NF 291

Query: 120 FETRVTEYQQG 130
           FE   T+Y   
Sbjct: 292 FEREGTDYSSS 302


>gi|290992332|ref|XP_002678788.1| predicted protein [Naegleria gruberi]
 gi|284092402|gb|EFC46044.1| predicted protein [Naegleria gruberi]
          Length = 330

 Score = 78.5 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 10/120 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  +      I RDE  H NF   + + +K       +K  Q    +++ EA  +E  + 
Sbjct: 194 MSALTISNDLIFRDEEFHSNFLYSLYSNLK------HSKLPQTLVHSLVKEAVDIEKEFI 247

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFF 120
             ++P   + L+  S  QY++ +++      G E LF +TEN   W+ ++  L  +  FF
Sbjct: 248 T-SLPTELIELDRNSMYQYVEVVSDNILISFGYEKLF-HTENQCSWIQDM--LMNKSGFF 303


>gi|225619347|ref|YP_002720573.1| ribonucleoside-diphosphate reductase subunit beta [Brachyspira
           hyodysenteriae WA1]
 gi|225214166|gb|ACN82900.1| ribonucleoside-diphosphate reductase, beta subunit [Brachyspira
           hyodysenteriae WA1]
          Length = 356

 Score = 78.1 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 10/143 (6%)

Query: 3   GIAEQYQYIMRDE-SLHLNFGIDVINQIKIENPHLWTKEFQ-----QKSRTMLHEATLLE 56
           G  +  + I  DE + H+  G +V+N ++ EN   +T  F+     + +R M       E
Sbjct: 214 GFTKTIKLIAHDELNTHVPTGKNVMNILRKENEQGFTHLFKSGWFNETARAMAEFTVNEE 273

Query: 57  IAYAHETMPK-GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLK 114
           I +A          G+N+   E ++++ A  R   +G+E  +   + +   W +   D+ 
Sbjct: 274 IKWAKYLFDGYQVAGINSSVSEHFIKYWAGVRLRDLGVESPYNEKKSDVIDWFNSYRDIN 333

Query: 115 KEKNF-FETRVTEYQQGAGLKWD 136
           K+     ET  T YQ+G  LK D
Sbjct: 334 KQNAALQETTNTSYQKG-ALKND 355


>gi|326800312|ref|YP_004318131.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
 gi|326551076|gb|ADZ79461.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
          Length = 327

 Score = 77.7 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 17/140 (12%)

Query: 1   MVGIAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           MV  A+  + I+ DES+H  F      D+  ++  +      +E ++K   +L      E
Sbjct: 184 MVASADIIKKIVADESIHGVFVGLLAQDIFRKLSNQ------EEVKKKVVDLLMLLYENE 237

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKK 115
           + Y  E      VGL A   ++Y+++ AN+    +G E LF+  E NP   +   ++L+ 
Sbjct: 238 LKYTEEIYTD--VGLTAE-VKEYVRYNANKALMNLGFEELFEVKEVNPI--VLNGLNLET 292

Query: 116 EK-NFFETRVTEYQQGAGLK 134
            + +FF  + T Y++   + 
Sbjct: 293 TQHDFFSKKSTNYEKATQIS 312


>gi|297622357|ref|YP_003703791.1| ribonucleotide reductase [Truepera radiovictrix DSM 17093]
 gi|297163537|gb|ADI13248.1| ribonucleotide reductase [Truepera radiovictrix DSM 17093]
          Length = 324

 Score = 77.7 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            G+A   +   ++E +H  FG  ++  ++ E P  +   F  + R    +A   E A   
Sbjct: 180 KGVANIVEATSKEEQIHGMFGYKLVETLRRERPEWFGAAFSARLRAACVDAERAERAILR 239

Query: 62  ETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
                G    L     E +MQ   N     +G  PL++       P  W  E +   K+ 
Sbjct: 240 WICEAGALPFLPLAQLEAFMQARFNGALVALGEAPLWEVDPALLAPTRWFEEELLSSKQV 299

Query: 118 NFFETRVTEYQQ 129
           +FF  R T Y +
Sbjct: 300 DFFHKRPTAYAK 311


>gi|146329200|ref|YP_001209518.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus
           VCS1703A]
 gi|146232670|gb|ABQ13648.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus
           VCS1703A]
          Length = 325

 Score = 77.3 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E +H  FGI + + IK E+P L+T  F    +T+  +A   E    +
Sbjct: 183 KGISNAVEATSKEEEIHGRFGIALYHIIKEEHPDLFTDSFYHHLKTLADQALAAERGILN 242

Query: 62  ETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
                G    L   + E Y+    N     +G+E  +   E       W    I   KE 
Sbjct: 243 WIFENGDLPFLQQKTVENYIVNRYNNSLSVLGIESPYTVDEERLKETQWFDIEILSGKEN 302

Query: 118 NFFETRVTEYQQ 129
           +FF  R T+Y +
Sbjct: 303 DFFYKRSTDYSK 314


>gi|156847976|ref|XP_001646871.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117552|gb|EDO19013.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 351

 Score = 77.3 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 53/130 (40%), Gaps = 9/130 (6%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            G       ++RD  LH++F   +         HL  +   +  + ++ +A  +E     
Sbjct: 210 PGFVTGVDNMLRDRGLHVDFCCLMY-------AHLKNQIDSEIVQKIIVDAVEIEKKSLL 262

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFE 121
           + +P   V L      Q+++++A+      G E  +  T NP+ +M E + L    N   
Sbjct: 263 KALPIIKVNLKIDEMNQFIEYVADSILVAFGNEKHYNAT-NPYEFM-ENVVLPGNTNSLA 320

Query: 122 TRVTEYQQGA 131
             + + Q+ +
Sbjct: 321 KTIADAQKAS 330


>gi|46401830|ref|YP_006922.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage T5]
 gi|45775008|gb|AAS77140.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage T5]
 gi|51512032|gb|AAU05231.1| ribonucleotide reductase beta subunit [Enterobacteria phage T5]
 gi|59897231|gb|AAX12026.1| ribonucleoside diphosphate reductase I beta chain [Enterobacteria
           phage T5]
          Length = 381

 Score = 77.3 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 4/115 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GIA+  Q I +DE+LH      +I  +  +       E   K+   L +    EI + H 
Sbjct: 227 GIAKNLQLIAKDEALHTQMSKAIIQIMFQQFDKDLVDEAVAKAPAQLLKTLKTEIEWGHF 286

Query: 63  TM-PKGFVGLNAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDL 113
               +  +GLNA   E+Y+ F+       IG+E    L   T+NP PW+   +D 
Sbjct: 287 IFKGRSLIGLNAELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDT 341


>gi|182682906|ref|YP_001837030.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage EPS7]
 gi|182630618|gb|ACB97550.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage EPS7]
          Length = 381

 Score = 76.6 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 4/115 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GIA+  Q I +DE+LH      +I  +  +       E   K+ T L +    EI + H 
Sbjct: 227 GIAKNLQLIAKDEALHTQMSKAIIQIMFQQFDKDLVDEALAKAPTQLLKTLKTEIEWGHF 286

Query: 63  TM-PKGFVGLNAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDL 113
               +  +GLNA   E+Y+ F+       IG+E    L   T+NP PW+   +D 
Sbjct: 287 IFKGRSLIGLNAELLEEYLYFVGRNAFMHIGVEWPSHLPVITKNPIPWIMNWLDT 341


>gi|261599112|ref|YP_003257364.1| ribonucleotide-diphosphate reductase beta subunit [Blattabacterium
           sp. (Periplaneta americana) str. BPLAN]
 gi|261497769|gb|ACX84218.1| ribonucleotide-diphosphate reductase beta subunit [Blattabacterium
           sp. (Periplaneta americana) str. BPLAN]
          Length = 357

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 5/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+ +Q  + +RDESLH   G  +      EN  L  +  ++     +  A   E  + 
Sbjct: 181 LKGVGQQIIFSVRDESLHSEAGCKIFRTFCEENKGLK-EIVERSVYHGVDLALKNEFVFI 239

Query: 61  HETM-PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV---IDLKKE 116
            +    +    +     + +M+  AN +  ++G    +         M+     I  +++
Sbjct: 240 DKIFGGRDLCTIKREELKNFMKDRANMKLRELGFFDSYHVDRRMLDNMNWFYITISGEQQ 299

Query: 117 KNFFETRVTEYQQ 129
            +FF+ R T Y +
Sbjct: 300 TDFFDNRETGYSK 312


>gi|326632980|ref|YP_004306569.1| putative aerobic ribonucleoside diphosphate reductase small subunit
           [Enterobacteria phage SPC35]
 gi|321272174|gb|ADW80066.1| putative aerobic ribonucleoside diphosphate reductase small subunit
           [Enterobacteria phage SPC35]
          Length = 381

 Score = 75.4 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 4/115 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           GIA+  Q I +DE+LH      +I  +  +       E   K+   L +    EI + H 
Sbjct: 227 GIAKNLQLIAKDEALHTQMSKAIIQIMFQQFDKDLVNEAVAKAPAQLLKTLKTEIEWGHF 286

Query: 63  TM-PKGFVGLNAPSCEQYMQFIANRRCHQIGLE---PLFKYTENPFPWMSEVIDL 113
               +  +GLNA   E+Y+ F+       IG++    L   T+NP PW+   +D 
Sbjct: 287 IFKGRSLIGLNAELLEEYLYFVGRNAFMHIGVKWPSHLPVITKNPIPWIMNWLDT 341


>gi|227537625|ref|ZP_03967674.1| ribonucleoside-diphosphate reductase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300771015|ref|ZP_07080892.1| ribonucleotide-diphosphate reductase subunit beta [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|227242511|gb|EEI92526.1| ribonucleoside-diphosphate reductase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300762288|gb|EFK59107.1| ribonucleotide-diphosphate reductase subunit beta [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 328

 Score = 75.0 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 21/141 (14%)

Query: 1   MVGIAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           MV  A+  + I+ DES+H  F      D+  +I  +      +E + +  T+L+E    E
Sbjct: 185 MVASADIIKKIIADESIHGVFVGLIAQDIFRRIPNK------EEVKARFLTLLNELYENE 238

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKK 115
           + Y  E      VGL A   ++Y+++  N+    +G +P+F+  + NP      +  L  
Sbjct: 239 LKYTEEIY--TVVGLTAE-VKEYVRYNGNKALMNLGFDPIFEVKQVNPI----VLNGLNT 291

Query: 116 EK---NFFETRVTEYQQGAGL 133
           E    +FF  + T Y++   +
Sbjct: 292 ETTQHDFFSKKSTNYEKATEI 312


>gi|37651592|ref|NP_932466.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t]
 gi|66391913|ref|YP_238838.1| hypothetical protein PHG31p109 [Aeromonas phage 31]
 gi|34732892|gb|AAQ81430.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t]
 gi|62114750|gb|AAX63598.1| hypothetical protein PHG31p109 [Aeromonas phage 31]
          Length = 323

 Score = 75.0 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 9/141 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWT----KEFQQKSRTMLHEATLLE 56
           M  I       + DE  H   G  +   +  E          ++ +     M H+    E
Sbjct: 179 MRNICRGVDLSVADEHHHSIGGAMLFRTLCREMMEHHKVDVREKLKDDIIAMAHQVYDHE 238

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKK 115
                    +   G+ A     +++   N     +G +P+F+   NP   W    I+ KK
Sbjct: 239 SGIIDLVFAEPIDGITADELRIFVKSRINLCLENLGYDPIFEIESNPIASWFYRTINAKK 298

Query: 116 EKNFFETRVTEYQQGAGLKWD 136
             +FF    +EY     + WD
Sbjct: 299 FHDFFTGSGSEYN----INWD 315


>gi|213585578|ref|ZP_03367404.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 189

 Score = 75.0 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 4/65 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 125 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 184

Query: 57  IAYAH 61
             +A 
Sbjct: 185 KEWAD 189


>gi|255656920|ref|ZP_05402329.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-23m63]
 gi|296452239|ref|ZP_06893946.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP08]
 gi|296877591|ref|ZP_06901622.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP07]
 gi|296258926|gb|EFH05814.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP08]
 gi|296431442|gb|EFH17258.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP07]
          Length = 323

 Score = 74.3 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 7/132 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV   E    I+RDESLH  +   +  +I      +  +  ++K  ++L+     EI Y 
Sbjct: 185 MVASGEIISLILRDESLHGKYIGLLAQEIYDSFDKMDKEILEEKMYSILYRLMENEIEYT 244

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           +    +  +         ++++ ANR    +G E L+     NP   +   +  + +  +
Sbjct: 245 NIIYRESGL---EKEVVNFLKYNANRALENLGFEKLYTVDAINPI--VLNGLSTETKTHD 299

Query: 119 FFETRVTEYQQG 130
           FF T+   YQ+G
Sbjct: 300 FFSTKGNGYQKG 311


>gi|164688728|ref|ZP_02212756.1| hypothetical protein CLOBAR_02375 [Clostridium bartlettii DSM
           16795]
 gi|164602204|gb|EDQ95669.1| hypothetical protein CLOBAR_02375 [Clostridium bartlettii DSM
           16795]
          Length = 327

 Score = 73.9 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 7/132 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+   E    I+RDESLH  +   +  +I  +      KE++ K   +       EI Y 
Sbjct: 185 MMASGEIISLILRDESLHGKYIGLLAQEIFKDFSKEEQKEYKSKVMDVFDRLMENEINYT 244

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           +        GL A     ++++ ANR    +G +   +    NP   +   +  + +  +
Sbjct: 245 NTIYEG--TGL-ADEVINFLKYNANRAMENLGYDNRLEVDPVNPI--VLNGLSTETKTHD 299

Query: 119 FFETRVTEYQQG 130
           FF T+   YQ+G
Sbjct: 300 FFSTKGNGYQKG 311


>gi|254976540|ref|ZP_05273012.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-66c26]
 gi|255093925|ref|ZP_05323403.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile CIP 107932]
 gi|255315677|ref|ZP_05357260.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-76w55]
 gi|255518338|ref|ZP_05386014.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-97b34]
 gi|255651455|ref|ZP_05398357.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-37x79]
 gi|260684515|ref|YP_003215800.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile CD196]
 gi|260688173|ref|YP_003219307.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile R20291]
 gi|260210678|emb|CBA65434.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile CD196]
 gi|260214190|emb|CBE06438.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile R20291]
          Length = 323

 Score = 73.9 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 7/132 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV   E    I+RDESLH  +   +  +I      +  K  ++K  ++L+     EI Y 
Sbjct: 185 MVASGEIISLILRDESLHGKYIGLLAQEIYDSFDKMDKKMLEEKMYSILYSLMENEIEYT 244

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           +    +  +         ++++ ANR    +G E L+     NP   +   +  + +  +
Sbjct: 245 NVIYRESGL---EKEVVNFLKYNANRALENLGFEKLYTVDAINPI--VLNGLSTETKTHD 299

Query: 119 FFETRVTEYQQG 130
           FF T+   YQ+G
Sbjct: 300 FFSTKGNGYQKG 311


>gi|301331892|gb|ADK70922.1| U27.5 [Elephant endotheliotropic herpesvirus 2]
          Length = 301

 Score = 73.5 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 12/128 (9%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
           G  E   YI RDES+H      +             +       ++  +   +E  + + 
Sbjct: 175 GTTEANTYICRDESIHTTAATKLYLNYVTPE----NRPSYSFIYSLFSDVIRIEKEFINA 230

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKNF 119
            +  G   +N       ++ +A++   +I ++PL+        P P    +  ++K   F
Sbjct: 231 KV-DGVGLINKKVIFDTLEGVADQLLARINMQPLYATQIPNNCPLP----LSTIEKNVCF 285

Query: 120 FETRVTEY 127
           FE R TEY
Sbjct: 286 FEKRNTEY 293


>gi|260889741|ref|ZP_05901004.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
           hofstadii F0254]
 gi|260860347|gb|EEX74847.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
           hofstadii F0254]
          Length = 335

 Score = 73.1 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 59/132 (44%), Gaps = 7/132 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV   +  + I+ DES+H  F   +  ++          + + + + ++++    E  Y 
Sbjct: 187 MVASCDIIKKIIADESIHGVFVGLLFQELYNSFSEEEKADMRAELKKLMYDLYENETRYT 246

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
            E      +GL     ++Y+++ AN+    +G E  F+    NP   +   ++++  + +
Sbjct: 247 DEIYGD--LGLTGD-VKEYIRYNANKALMNLGFEEEFEVKNVNPI--VLNGLNVETTQHD 301

Query: 119 FFETRVTEYQQG 130
           FF  + T Y++ 
Sbjct: 302 FFSKKSTNYEKA 313


>gi|149408186|ref|YP_001294620.1| hypothetical protein ORF027 [Pseudomonas phage PA11]
          Length = 322

 Score = 73.1 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 9/134 (6%)

Query: 8   YQYIMRDESLHLNFGIDVINQIKIE---NPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
             + +RDE+LH   G  + N +K E            +       H     E        
Sbjct: 187 INFSVRDENLHCEGGAWLYNTLKQEIKSEGGYINPNLEYDLANCAHTIAEHEFRIVDMIF 246

Query: 65  PKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKNFFET 122
            KG   G+ A   + +++   N    Q+G+EP+F+ + N    W  + I+     +FF  
Sbjct: 247 EKGEMEGITAEQMKTFVKSRVNICLAQLGIEPVFEVSNNIVAEWFYDGINGVMFHDFFSG 306

Query: 123 RVTEYQQGAGLKWD 136
               Y +     WD
Sbjct: 307 IGNSYNRS----WD 316


>gi|126700615|ref|YP_001089512.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile 630]
 gi|255102106|ref|ZP_05331083.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-63q42]
 gi|255307975|ref|ZP_05352146.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile ATCC 43255]
 gi|115252052|emb|CAJ69888.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Clostridium difficile]
          Length = 323

 Score = 73.1 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 7/132 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV   E    I+RDESLH  +   +  +I      +  +  ++K  ++L+     EI Y 
Sbjct: 185 MVASGEIISLILRDESLHGKYIGLLAQEIYDSFDKMDKEMLEEKMYSILYSLMENEIEYT 244

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           +    +  +         ++++ ANR    +G E L+     NP   +   +  + +  +
Sbjct: 245 NVIYRESGL---EKEVVNFLKYNANRALENLGFEKLYTVDAINPI--VLNGLSTETKTHD 299

Query: 119 FFETRVTEYQQG 130
           FF T+   YQ+G
Sbjct: 300 FFSTKGNGYQKG 311


>gi|257125877|ref|YP_003163991.1| ribonucleoside-diphosphate reductase [Leptotrichia buccalis
           C-1013-b]
 gi|257049816|gb|ACV39000.1| Ribonucleoside-diphosphate reductase [Leptotrichia buccalis
           C-1013-b]
          Length = 335

 Score = 72.7 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 60/132 (45%), Gaps = 7/132 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV   +  + I+ DES+H  F   +  ++          + + + + ++++    E  Y 
Sbjct: 186 MVASCDIIKKIIADESIHGVFVGLLFQELYNSFSEEEKADMRAELKKLMYDLYENETRYT 245

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
            E      +GL   + ++Y+++ AN+    +G E  F+    NP   +   ++++  + +
Sbjct: 246 DEIYGD--LGLT-GNVKEYIRYNANKALMNLGFEEEFEVKNVNPI--VLNGLNVETTQHD 300

Query: 119 FFETRVTEYQQG 130
           FF  + T Y++ 
Sbjct: 301 FFSKKSTNYEKA 312


>gi|327493647|gb|AEA86506.1| Ribonucleotide reductase, small subunit [Campylobacter phage
           NCTC12673]
          Length = 378

 Score = 72.7 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 46/105 (43%), Gaps = 5/105 (4%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENP----HLWTKEFQQKSRTMLHEATLLEI 57
             + +  + I  DE +HL     ++  ++ E      HL+     +K+R +  +    E+
Sbjct: 210 PNLTKIIKLINNDEDIHLVIFSFILKTLRSEQHQGFSHLFDDSLSRKARKIAKKVYQDEL 269

Query: 58  AYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
            +A   +  G   GL   + + +++F  + R  + G +P++   +
Sbjct: 270 EWAKYLLSMGPIPGLTIENIDGFLKFFVDDRLKKCGFQPIWNAPK 314


>gi|228926484|ref|ZP_04089556.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228833308|gb|EEM78873.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 322

 Score = 72.0 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AYA E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYAEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|302321458|gb|ADL16651.1| RNR2 [Abalone herpesvirus Victoria/AUS/2007]
          Length = 642

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 18/138 (13%)

Query: 1   MV-GIAEQYQ--YIMR-DESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           M  G+    +    +R DE+LH +F   + N        +  +   +K + ++ +A  +E
Sbjct: 232 MPTGLKTLIEGNQSVRNDETLHGSFYAALHN-------IMPDRASPEKVKEIIVKAVEIE 284

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY------TENPFPWMSEV 110
           IA+A   + +    +N  S + +++  AN  C  +G+EP++          +P  +M+  
Sbjct: 285 IAFAMSIVTEDLEHINPSSMQLHIKATANLCCEFLGVEPIYFDRWTKLPVVSPLSYMNNY 344

Query: 111 IDLKKEKNFFETRVTEYQ 128
             L+K  NFFE R  +Y 
Sbjct: 345 ETLQKF-NFFEVRNMDYS 361


>gi|325171172|ref|YP_004251147.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage
           ICP1]
 gi|323512567|gb|ADX88022.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage
           ICP1]
 gi|323513935|gb|ADX89384.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2001_A]
 gi|323514163|gb|ADX89611.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2004_A]
          Length = 450

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 4/115 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWT-KEFQQKSRTMLHEATLLEIAYAH 61
           G+A   Q IM DE++H      +IN +  +   L T ++ +   + ++      E++++ 
Sbjct: 220 GVASLVQKIMIDETIHTRMDEAIINILLGDEVWLKTFEDIKPDIKEIVDSVYKQELSWSE 279

Query: 62  ETM--PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDL 113
                 +  VGLN    ++++Q+ +     ++G+E  F+    NP PWM   +D+
Sbjct: 280 YIFSEGRSIVGLNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDI 334


>gi|323512793|gb|ADX88247.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_D]
 gi|323513021|gb|ADX88474.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_C]
 gi|323513246|gb|ADX88698.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_B]
 gi|323513473|gb|ADX88924.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_A]
 gi|323513704|gb|ADX89154.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2005_A]
          Length = 450

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 4/115 (3%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWT-KEFQQKSRTMLHEATLLEIAYAH 61
           G+A   Q IM DE++H      +IN +  +   L T ++ +   + ++      E++++ 
Sbjct: 220 GVASLVQKIMIDETIHTRMDEAIINILLGDEVWLKTFEDIKPDIKEIVDSVYKQELSWSE 279

Query: 62  ETM--PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDL 113
                 +  VGLN    ++++Q+ +     ++G+E  F+    NP PWM   +D+
Sbjct: 280 YIFSEGRSIVGLNTSLLKEWVQYKSQVVYKKLGIEQPFEDVINNPLPWMENWLDI 334


>gi|109290088|ref|YP_656337.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25]
 gi|104345761|gb|ABF72661.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25]
          Length = 332

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 5/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVI----NQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           M  I       + DE  H   G  +      ++K +       + +     M  +    E
Sbjct: 188 MRNICRGVDLSVADEHHHSIGGAMLFQTLCREMKEKYGEDVRAKLKNDIINMARQVFDHE 247

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKK 115
                    +   G+ A     +++   N     +G EP+F+   NP   W    I+ KK
Sbjct: 248 SGIIDLVFAEPIDGITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFYRTINAKK 307

Query: 116 EKNFFETRVTEYQ 128
             +FF    +EY 
Sbjct: 308 FHDFFTGSGSEYN 320


>gi|262038309|ref|ZP_06011695.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
           goodfellowii F0264]
 gi|261747660|gb|EEY35113.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
           goodfellowii F0264]
          Length = 334

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 7/132 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV   +  + I+ DES+H  F   +  +I         +  +++ + ++H+    E  Y 
Sbjct: 186 MVASCDIIKKIIADESIHGVFVGLLSQEIYATFSEEEKESVRKELKELMHDLYENEARYT 245

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
            E      VGL A   ++Y+++ AN+    +G E  F+  + NP   +   ++++  + +
Sbjct: 246 DEVYGD--VGLTAD-VKEYIRYNANKALMNLGFEEEFEVKDVNPI--VLNGLNVETTQHD 300

Query: 119 FFETRVTEYQQG 130
           FF  + T Y++ 
Sbjct: 301 FFSKKSTNYEKA 312


>gi|229160405|ref|ZP_04288403.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           R309803]
 gi|228623129|gb|EEK79957.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           R309803]
          Length = 322

 Score = 71.6 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|47566242|ref|ZP_00237270.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9241]
 gi|47556795|gb|EAL15126.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9241]
          Length = 322

 Score = 71.6 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|229095937|ref|ZP_04226913.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-29]
 gi|229114891|ref|ZP_04244304.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-3]
 gi|228668583|gb|EEL24012.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-3]
 gi|228687447|gb|EEL41349.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-29]
          Length = 322

 Score = 71.2 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VDDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|52143985|ref|YP_082843.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           E33L]
 gi|228984529|ref|ZP_04144706.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229155020|ref|ZP_04283134.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 4342]
 gi|51977454|gb|AAU19004.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           E33L]
 gi|157955324|gb|ABW06037.1| NrdF [Bacillus thuringiensis serovar tochigiensis]
 gi|228628578|gb|EEK85291.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 4342]
 gi|228775232|gb|EEM23621.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 322

 Score = 71.2 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|229029125|ref|ZP_04185222.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH1271]
 gi|228732183|gb|EEL83068.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH1271]
          Length = 322

 Score = 71.2 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQLFTELSAEDQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|30261453|ref|NP_843830.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Ames]
 gi|47526645|ref|YP_017994.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49184287|ref|YP_027539.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Sterne]
 gi|49477196|ref|YP_035577.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|65318723|ref|ZP_00391682.1| COG0208: Ribonucleotide reductase, beta subunit [Bacillus anthracis
           str. A2012]
 gi|118476922|ref|YP_894073.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis str. Al Hakam]
 gi|165870361|ref|ZP_02215016.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0488]
 gi|167634337|ref|ZP_02392658.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0442]
 gi|167639338|ref|ZP_02397610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0193]
 gi|170686782|ref|ZP_02878002.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0465]
 gi|170706310|ref|ZP_02896771.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0389]
 gi|177651561|ref|ZP_02934350.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0174]
 gi|190568085|ref|ZP_03020995.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|196035278|ref|ZP_03102683.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           W]
 gi|196046555|ref|ZP_03113780.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB108]
 gi|218902561|ref|YP_002450395.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH820]
 gi|225863317|ref|YP_002748695.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB102]
 gi|227815798|ref|YP_002815807.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|228914025|ref|ZP_04077647.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228932735|ref|ZP_04095607.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228945050|ref|ZP_04107411.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229090407|ref|ZP_04221650.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-42]
 gi|229120993|ref|ZP_04250235.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           95/8201]
 gi|229183646|ref|ZP_04310869.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BGSC 6E1]
 gi|229602752|ref|YP_002865867.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0248]
 gi|254682483|ref|ZP_05146344.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. CNEVA-9066]
 gi|254726146|ref|ZP_05187928.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. A1055]
 gi|254733899|ref|ZP_05191613.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Western North America USA6153]
 gi|254740411|ref|ZP_05198102.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Kruger B]
 gi|254753802|ref|ZP_05205837.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Vollum]
 gi|254758897|ref|ZP_05210924.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Australia 94]
 gi|301052993|ref|YP_003791204.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis CI]
 gi|30255307|gb|AAP25316.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. Ames]
 gi|47501793|gb|AAT30469.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49178214|gb|AAT53590.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. Sterne]
 gi|49328752|gb|AAT59398.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|72414680|emb|CAG28950.1| ribonucleoside-diphosphate reductase class Ib beta chain [Bacillus
           anthracis]
 gi|118416147|gb|ABK84566.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bacillus thuringiensis str. Al Hakam]
 gi|157955314|gb|ABW06029.1| NrdF [Bacillus thuringiensis serovar finitimus]
 gi|164713856|gb|EDR19378.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0488]
 gi|167512777|gb|EDR88151.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0193]
 gi|167530225|gb|EDR92951.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0442]
 gi|170128844|gb|EDS97710.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0389]
 gi|170669305|gb|EDT20048.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0465]
 gi|172082839|gb|EDT67902.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0174]
 gi|190560819|gb|EDV14794.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|195991955|gb|EDX55918.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           W]
 gi|196022739|gb|EDX61421.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB108]
 gi|218537212|gb|ACK89610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH820]
 gi|225785957|gb|ACO26174.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB102]
 gi|227004217|gb|ACP13960.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|228599889|gb|EEK57486.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BGSC 6E1]
 gi|228662653|gb|EEL18251.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           95/8201]
 gi|228692990|gb|EEL46708.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-42]
 gi|228814719|gb|EEM60979.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228826940|gb|EEM72702.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228845630|gb|EEM90659.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229267160|gb|ACQ48797.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0248]
 gi|300375162|gb|ADK04066.1| ribonucleotide-diphosphate reductase beta subunit [Bacillus cereus
           biovar anthracis str. CI]
 gi|324325470|gb|ADY20730.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 322

 Score = 71.2 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|157955319|gb|ABW06033.1| NrdF [Bacillus thuringiensis serovar pakistani]
          Length = 322

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|42780545|ref|NP_977792.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           ATCC 10987]
 gi|42736465|gb|AAS40400.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           ATCC 10987]
          Length = 322

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|228938567|ref|ZP_04101175.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228971446|ref|ZP_04132072.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228978059|ref|ZP_04138438.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis Bt407]
 gi|157955340|gb|ABW06049.1| NrdF [Bacillus thuringiensis serovar thuringiensis]
 gi|157955368|gb|ABW06070.1| NrdF [Bacillus thuringiensis serovar galechiae]
 gi|157955384|gb|ABW06082.1| NrdF [Bacillus thuringiensis serovar sotto]
 gi|228781720|gb|EEM29919.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis Bt407]
 gi|228788313|gb|EEM36266.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228821165|gb|EEM67182.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326939076|gb|AEA14972.1| ribonucleotide-diphosphate reductase [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 322

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|218233288|ref|YP_002366135.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           B4264]
 gi|229149653|ref|ZP_04277884.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1550]
 gi|157955328|gb|ABW06040.1| NrdF [Bacillus thuringiensis serovar entomocidus]
 gi|157955388|gb|ABW06085.1| NrdF [Bacillus thuringiensis serovar subtoxicus]
 gi|157955409|gb|ABW06101.1| NrdF [Bacillus cereus]
 gi|218161245|gb|ACK61237.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           B4264]
 gi|228633863|gb|EEK90461.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1550]
          Length = 322

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQDLLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|229189534|ref|ZP_04316550.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 10876]
 gi|228593979|gb|EEK51782.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 10876]
          Length = 322

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAKEQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|157955332|gb|ABW06043.1| NrdF [Bacillus thuringiensis serovar galleriae]
 gi|157955344|gb|ABW06052.1| NrdF [Bacillus thuringiensis serovar tolworthi]
          Length = 322

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|326536370|ref|YP_004300811.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage 133]
 gi|299483451|gb|ADJ19545.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage 133]
          Length = 382

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLE 56
           M G  +  Q+I RDE+LH      ++ Q+         +E     ++++  M  E    E
Sbjct: 223 MEGNMKIMQFIARDENLHHQGTRYILQQMNKGIDGTEWREIALDCKEEAEAMFLEVRAQE 282

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVI 111
            A+A      G   GL      +++ +        +GL  P+ +   +P PW+++ +
Sbjct: 283 RAWATYVYRNGHPDGLTTDLVHEFIDYQLVPAMKNVGLNCPIERPKRHPLPWVNKYL 339


>gi|157955376|gb|ABW06076.1| NrdF [Bacillus thuringiensis serovar morrisoni]
          Length = 322

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|75759355|ref|ZP_00739452.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218896385|ref|YP_002444796.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9842]
 gi|228900033|ref|ZP_04064269.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
 gi|228920164|ref|ZP_04083513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228964415|ref|ZP_04125529.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|74493187|gb|EAO56306.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|157955348|gb|ABW06055.1| NrdF [Bacillus thuringiensis serovar alesti]
 gi|157955356|gb|ABW06061.1| NrdF [Bacillus thuringiensis serovar dakota]
 gi|157955360|gb|ABW06064.1| NrdF [Bacillus thuringiensis serovar darmstadiensis]
 gi|157955364|gb|ABW06067.1| NrdF [Bacillus thuringiensis serovar dendrolimus]
 gi|157955380|gb|ABW06079.1| NrdF [Bacillus thuringiensis serovar ostriniae]
 gi|218545942|gb|ACK98336.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9842]
 gi|228795272|gb|EEM42764.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228839620|gb|EEM84912.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228859647|gb|EEN04071.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
          Length = 322

 Score = 70.8 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|157955305|gb|ABW06022.1| NrdF [Bacillus thuringiensis serovar aizawai]
 gi|157955352|gb|ABW06058.1| NrdF [Bacillus thuringiensis serovar colmeri]
 gi|157955372|gb|ABW06073.1| NrdF [Bacillus thuringiensis serovar indiana]
 gi|157955405|gb|ABW06098.1| NrdF [Bacillus thuringiensis serovar wuhanensis]
          Length = 322

 Score = 70.8 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|30019505|ref|NP_831136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           ATCC 14579]
 gi|229043194|ref|ZP_04190917.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH676]
 gi|229078637|ref|ZP_04211194.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock4-2]
 gi|229108909|ref|ZP_04238513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-15]
 gi|229126769|ref|ZP_04255781.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-Cer4]
 gi|229144056|ref|ZP_04272472.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST24]
 gi|296502033|ref|YP_003663733.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis BMB171]
 gi|29895049|gb|AAP08337.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 14579]
 gi|157955310|gb|ABW06026.1| NrdF [Bacillus thuringiensis serovar canadensis]
 gi|157955392|gb|ABW06088.1| NrdF [Bacillus thuringiensis serovar thompsoni]
 gi|157955396|gb|ABW06091.1| NrdF [Bacillus thuringiensis serovar tohokuensis]
 gi|228639453|gb|EEK95867.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST24]
 gi|228656709|gb|EEL12535.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-Cer4]
 gi|228674565|gb|EEL29805.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-15]
 gi|228704707|gb|EEL57136.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock4-2]
 gi|228726156|gb|EEL77390.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH676]
 gi|296323085|gb|ADH06013.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis BMB171]
          Length = 322

 Score = 70.8 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|229177859|ref|ZP_04305232.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           172560W]
 gi|228605650|gb|EEK63098.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           172560W]
          Length = 322

 Score = 70.8 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|228907084|ref|ZP_04070948.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 200]
 gi|157955401|gb|ABW06095.1| NrdF [Bacillus thuringiensis serovar toumanoffi]
 gi|228852588|gb|EEM97378.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 200]
          Length = 322

 Score = 70.8 bits (173), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|157955336|gb|ABW06046.1| NrdF [Bacillus thuringiensis serovar kurstaki]
          Length = 322

 Score = 70.8 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E + +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELSEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|320450283|ref|YP_004202379.1| ribonucleoside-diphosphate reductase subunit beta [Thermus
           scotoductus SA-01]
 gi|320150452|gb|ADW21830.1| ribonucleoside-diphosphate reductase, subunit beta [Thermus
           scotoductus SA-01]
          Length = 323

 Score = 70.8 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 53/132 (40%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E+LH  FG++++  ++ E P L+   F +++   +      E A   
Sbjct: 181 KGISNAIEATSKEENLHGLFGVELLRILREERPDLFGPSFTEEALDRVEAFFRTEEALLE 240

Query: 62  ETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEK 117
               +G    +      +++++  N+     GL   F   +       W    +   KE 
Sbjct: 241 WIFARGDTEAVRGEEVLEFLKWRYNQVLALHGLPAPFPVRKECLRDTEWFDLELLADKEV 300

Query: 118 NFFETRVTEYQQ 129
           +FF  R   Y +
Sbjct: 301 DFFNKRSVAYAR 312


>gi|229084444|ref|ZP_04216723.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-44]
 gi|228698872|gb|EEL51578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-44]
          Length = 322

 Score = 70.8 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAELSAEEQQEVQKETQELLMELYEIEMAYTDEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEEVNRFVRYNANKGLMNLGLEPRFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|213581345|ref|ZP_03363171.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 90

 Score = 70.8 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 59  YAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKE 116
           +A      G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +
Sbjct: 1   WADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQ 60

Query: 117 KNFFETRVTEY 127
               E  V+ Y
Sbjct: 61  VAPQEVEVSSY 71


>gi|228990454|ref|ZP_04150419.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           pseudomycoides DSM 12442]
 gi|228996556|ref|ZP_04156195.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock3-17]
 gi|229004206|ref|ZP_04162007.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock1-4]
 gi|228757067|gb|EEM06311.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock1-4]
 gi|228763188|gb|EEM12096.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock3-17]
 gi|228768980|gb|EEM17578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           pseudomycoides DSM 12442]
          Length = 322

 Score = 70.4 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFAEFSAEEQQEVQKETQELLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPRFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|152974880|ref|YP_001374397.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152023632|gb|ABS21402.1| Ribonucleoside-diphosphate reductase [Bacillus cytotoxicus NVH
           391-98]
          Length = 322

 Score = 70.4 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      ++ Q++++ +L E   +E AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGLLAQQIFAELSAEEQEDVQKETQDLLMELYEIETAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--ASIGL-VGEVNRFVRYNANKGLMNLGLEPRFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|310722361|ref|YP_003969185.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4]
 gi|306021204|gb|ADM79739.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4]
          Length = 332

 Score = 70.4 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 5/133 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVI----NQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           M  I       + DE  H   G  +      ++K +       + +     M ++    E
Sbjct: 188 MRNICRGVDLSVADEHHHSIGGAMLFQTLCREMKEKYGEDVRAKLKNDIINMAYQVFDHE 247

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKK 115
                    +   G+ A     +++   N     +G EP+F+   NP   W    I+ KK
Sbjct: 248 SGIIDLVFAEPIDGITADELRVFVKSRINLCLENLGYEPIFEIENNPIADWFYRTINAKK 307

Query: 116 EKNFFETRVTEYQ 128
             +FF    +EY 
Sbjct: 308 FHDFFTGSGSEYN 320


>gi|163939261|ref|YP_001644145.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           weihenstephanensis KBAB4]
 gi|229010750|ref|ZP_04167947.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           DSM 2048]
 gi|229132251|ref|ZP_04261107.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST196]
 gi|229166287|ref|ZP_04294046.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH621]
 gi|163861458|gb|ABY42517.1| Ribonucleoside-diphosphate reductase [Bacillus weihenstephanensis
           KBAB4]
 gi|228617232|gb|EEK74298.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH621]
 gi|228651189|gb|EEL07168.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST196]
 gi|228750424|gb|EEM00253.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           DSM 2048]
          Length = 322

 Score = 70.4 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q +++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFTELSAEEQQEVQTETQELLMELYEIELAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|229057079|ref|ZP_04196471.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH603]
 gi|228720220|gb|EEL71799.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH603]
          Length = 322

 Score = 70.4 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  QI  E      +E Q +++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQIFTELSAKEQQEVQTETQELLMELYEIELAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|229102053|ref|ZP_04232765.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-28]
 gi|228681373|gb|EEL35538.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-28]
          Length = 322

 Score = 70.0 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  F   +  Q+  E      +E Q++++ +L E   +E+AY  E 
Sbjct: 184 SGEIINLIIRDESIHGVFVGILAQQLFAELSAEDQQEVQKETQVLLMELYEIEMAYTEEI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL      +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  
Sbjct: 244 Y--TSIGL-VDDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSV 299

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 300 KGNGYVKATNVE 311


>gi|311068263|ref|YP_003973186.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           atrophaeus 1942]
 gi|310868780|gb|ADP32255.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           atrophaeus 1942]
          Length = 328

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 62/137 (45%), Gaps = 9/137 (6%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDE++H  +   +  +I  + P     E ++ S  +L +    E+ Y  + 
Sbjct: 187 SGEIINLILRDEAIHGVYIGLLAQEIYNKQPEEKKAELREFSIELLEQLYENELEYTEDL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFE 121
                VGL+    ++++++ AN+    +G +  F+  E NP   +   ++ K +  +FF 
Sbjct: 247 Y--DQVGLS-HDVKKFIRYNANKALMNLGFDSYFEEEEINPI--VLNGLNTKTKSHDFFS 301

Query: 122 TRVTEYQQGAG--LKWD 136
            +   Y++     +K D
Sbjct: 302 MKGNGYKKATVEPIKDD 318


>gi|311993498|ref|YP_004010363.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage Acj9]
 gi|295917455|gb|ADG60126.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage Acj9]
          Length = 379

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 6/119 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENP----HLWTKEFQQKSRTMLHEATLLE 56
           M G  +  Q+I RDE+LH      ++ Q+              E + ++  +  E    E
Sbjct: 219 MEGNMKIMQFIARDENLHHQGTRYILQQMNKGIDGTEWREIALECKAEAEELFIEVRNQE 278

Query: 57  IAYAHETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLE-PLFKYTENPFPWMSEVIDL 113
            A+A      G   GL       ++ +      + +GL  P+ +   +P PW+++ +  
Sbjct: 279 RAWASYVYRDGCPPGLTVELVHDFIDYQLVPAMNNVGLTCPVQRPKRHPLPWVNKYLMA 337


>gi|325989612|ref|YP_004249311.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma suis
           KI3806]
 gi|323574697|emb|CBZ40353.1| Ribonucleoside-diphosphate reductase beta chain [Mycoplasma suis]
          Length = 330

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 60/138 (43%), Gaps = 9/138 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+   E    I+RDE++H  +  ++ +++         ++ +++  ++L E    EI Y 
Sbjct: 189 MINSGEIINLIIRDEAIHGLYIGNLASKLFSTFDSEKQEKLKKQVYSLLEELMENEIEYT 248

Query: 61  HETM-PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKE 116
            +   P   VG       Q++++ AN+    + LE  +  TE   NP  +       K  
Sbjct: 249 EKIYSPINLVG----EVIQFLKYNANKALQNLDLEEKYDVTENDINPMIFNGLNTSTKNH 304

Query: 117 KNFFETRVTEYQQGAGLK 134
            +FF T+   Y +   ++
Sbjct: 305 -DFFSTKGNGYIKTTHVE 321


>gi|289804144|ref|ZP_06534773.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 130

 Score = 69.6 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 4/61 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 65  MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 124

Query: 57  I 57
            
Sbjct: 125 K 125


>gi|325973169|ref|YP_004250233.1| ribonucleoside-diphosphate reductase subunit beta [Mycoplasma suis
           str. Illinois]
 gi|323651771|gb|ADX97853.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma suis
           str. Illinois]
          Length = 330

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 60/138 (43%), Gaps = 9/138 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+   E    I+RDE++H  +  ++ +++         ++ +++  ++L E    EI Y 
Sbjct: 189 MINSGEIINLIIRDEAIHGLYIGNLASKLFSTFDSEKQEKLKKQVYSLLEELMENEIEYT 248

Query: 61  HETM-PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKE 116
            +   P   VG       Q++++ AN+    + LE  +  TE   NP  +       K  
Sbjct: 249 EKVYSPINLVG----EVIQFLKYNANKALQNLDLEEKYDVTENDINPMIFNGLNTSTKNH 304

Query: 117 KNFFETRVTEYQQGAGLK 134
            +FF T+   Y +   ++
Sbjct: 305 -DFFSTKGNGYIKTTHVE 321


>gi|213855387|ref|ZP_03383627.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
          Length = 160

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 4/61 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++  +++P +    +E +Q+   +  +A   E
Sbjct: 89  MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGVDDPEMAEIAEECKQECYDLFVQAAQQE 148

Query: 57  I 57
            
Sbjct: 149 K 149


>gi|269123322|ref|YP_003305899.1| Ribonucleoside-diphosphate reductase [Streptobacillus moniliformis
           DSM 12112]
 gi|268314648|gb|ACZ01022.1| Ribonucleoside-diphosphate reductase [Streptobacillus moniliformis
           DSM 12112]
          Length = 333

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 62/131 (47%), Gaps = 7/131 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  ++  + I+ DES+H  F   +  +I  E   +  +  +++   + +E    E+ + 
Sbjct: 186 MVASSDIIKKIIADESIHGVFVGKLAQEIFEEMSFVEKESVKKEIMNLFYELYENELKFT 245

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
            E      VGL +   ++Y+++  N+    +G +  F+  E N    +   ++++  + +
Sbjct: 246 DEIYSD--VGLTSE-VKEYIRYNGNKALMNLGFKEEFEIKEVNAI--VLNGLNVETTQHD 300

Query: 119 FFETRVTEYQQ 129
           FF  + T Y++
Sbjct: 301 FFSKKSTNYEK 311


>gi|251797995|ref|YP_003012726.1| ribonucleotide-diphosphate reductase subunit beta [Paenibacillus
           sp. JDR-2]
 gi|247545621|gb|ACT02640.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. JDR-2]
          Length = 318

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 13/140 (9%)

Query: 1   MVGIAEQYQYIMRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           M    E    I+RDES+H         ++ NQ   E       + +++   +L+     E
Sbjct: 177 MTSSGEIIDLILRDESIHGLYVGVLAQELFNQFTPEE----QAQLKEEVFALLNTLYENE 232

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKK 115
           + Y         +GL     + Y+++ AN+    +G EP F     NP  + + +    K
Sbjct: 233 VVYTDNLY--SPIGL-QEDVKAYVRYNANKALMNLGFEPYFPEEPVNPIVF-NGISTHTK 288

Query: 116 EKNFFETRVTEYQQGAGLKW 135
           + +FF  +   Y +   ++ 
Sbjct: 289 QHDFFSKKGNGYVRTVHIEQ 308


>gi|307244651|ref|ZP_07526755.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492032|gb|EFM64081.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus stomatis DSM 17678]
          Length = 328

 Score = 68.1 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 7/132 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+   E    I+RDESLH  +   +  +   E  +    E ++K  ++L E    E  Y 
Sbjct: 190 MISSGEIISLILRDESLHGKYIGLLAQEKFNEFHYDDKNELKEKVYSLLKELMENEEKYT 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
                   +         ++++ AN     +G E  +K    N    +   +  + +  +
Sbjct: 250 KLLYEGSGL---EEQVINFLKYNANTALTNMGFEEFYKVEPVNAI--VLNGLSTETKTHD 304

Query: 119 FFETRVTEYQQG 130
           FF T+   YQ+G
Sbjct: 305 FFSTKGNGYQKG 316


>gi|293374706|ref|ZP_06621014.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sanguinis PC909]
 gi|325840602|ref|ZP_08167083.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sp. HGF1]
 gi|292646620|gb|EFF64622.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sanguinis PC909]
 gi|325490251|gb|EGC92584.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sp. HGF1]
          Length = 321

 Score = 68.1 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 11/139 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV   E    I+RDE LH         Q+  E       + +Q++  M+ E   +E+ Y+
Sbjct: 180 MVNSGEIINLILRDEKLHTVGVGFFAQQLLSEFDESIQAKLKQQAVEMMQEIYEVEVEYS 239

Query: 61  HETMPK-GFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKE 116
                    +         Y+Q+  N     + L PLF   E   NP   +   I  + +
Sbjct: 240 KVLYENLDMI----DDVVSYIQYNVNYALQCLNLNPLFDIVESDINPI--VLNGISTETK 293

Query: 117 K-NFFETRVTEYQQGAGLK 134
             +FF T+   Y +   ++
Sbjct: 294 NHDFFSTKGNGYIKTTKVE 312


>gi|328912184|gb|AEB63780.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           amyloliquefaciens LL3]
          Length = 305

 Score = 67.7 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 57/131 (43%), Gaps = 7/131 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDE+LH  +   +  +I  +   +  KE  + +  +L +    E+ Y  + 
Sbjct: 168 SGEIVNLIIRDEALHGVYTGLLAQEIYSKQTEIKKKELYKWTIDLLLDLYENELDYTTDL 227

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFE 121
                VGL     ++++++ AN+  + +G +  F   E NP   +   +  K +  +FF 
Sbjct: 228 Y--DPVGLT-HDVKKFIRYNANKALNNLGFDHYFHEEEINPV--VLNGLSTKTKSMDFFS 282

Query: 122 TRVTEYQQGAG 132
            +   Y++   
Sbjct: 283 QKGNSYRKATA 293


>gi|308172806|ref|YP_003919511.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           amyloliquefaciens DSM 7]
 gi|307605670|emb|CBI42041.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           amyloliquefaciens DSM 7]
          Length = 327

 Score = 67.7 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 57/131 (43%), Gaps = 7/131 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDE++H  +   +  +I  +       E +  +  +L E    E+AY  + 
Sbjct: 190 SGEIINLIIRDEAIHGVYVGLLAQEIYGKQDPDVQLEMRDFAVELLTELYDNEVAYTEDL 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEK-NFFE 121
                VGL     ++++++ AN+    +G +P F +   NP   +   ++ K +  +FF 
Sbjct: 250 Y--DAVGLT-HDVKRFLRYNANKALQNLGFDPYFEEERPNPI--VMNGLNTKTKSHDFFS 304

Query: 122 TRVTEYQQGAG 132
            +   Y++   
Sbjct: 305 QKGNGYKKATV 315


>gi|299537049|ref|ZP_07050352.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
           fusiformis ZC1]
 gi|298727290|gb|EFI67862.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
           fusiformis ZC1]
          Length = 322

 Score = 67.7 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 17/141 (12%)

Query: 4   IAEQYQYIMRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
            AE    I+RDES+H      F  ++  Q   E       E       +L +    E+ Y
Sbjct: 185 SAEIISLILRDESIHGVAVGFFAQNLFKQFSKEKQE----ELHLWGYELLLDLYQNEMKY 240

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK- 117
             +       GL+      Y+++ AN+    +G E +F   E NP   +   I  +    
Sbjct: 241 TDDIY--AETGLSPE-VRAYVRYNANKALMNVGFEAMFPEEEVNPI--VMNGIRNEGSTY 295

Query: 118 NFFETRVTEYQQG--AGLKWD 136
           +FF  +   Y +   A +  D
Sbjct: 296 DFFSQKGATYAKAKVAPITDD 316


>gi|16078802|ref|NP_389621.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221309618|ref|ZP_03591465.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221313941|ref|ZP_03595746.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221318864|ref|ZP_03600158.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221323136|ref|ZP_03604430.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. SMY]
 gi|321315508|ref|YP_004207795.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis BSn5]
 gi|1710395|sp|P50621|RIR2_BACSU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1154633|emb|CAA92811.1| NrdF [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634123|emb|CAB13623.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|116733911|gb|ABK20014.1| ribonucleotide-diphosphate reductase beta [synthetic construct]
 gi|291484287|dbj|BAI85362.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. natto BEST195]
 gi|320021782|gb|ADV96768.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis BSn5]
          Length = 329

 Score = 67.7 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 63/137 (45%), Gaps = 9/137 (6%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDE++H  +   +  +I  +       E ++ +  +L++    E+ Y  + 
Sbjct: 187 SGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFE 121
                VGL+    ++++++ AN+    +G +P F+  + NP   +   ++ K +  +FF 
Sbjct: 247 Y--DQVGLS-HDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFS 301

Query: 122 TRVTEYQQGAG--LKWD 136
            +   Y++     LK D
Sbjct: 302 MKGNGYKKATVEPLKDD 318


>gi|148688624|gb|EDL20571.1| mCG140327 [Mus musculus]
          Length = 65

 Score = 67.3 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 81  QFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGLK 134
           +F+A+    ++G   +F+  ENPF +M E I L+ + NFFE RV EYQ+   + 
Sbjct: 1   EFVADMLMLELGFNKIFR-VENPFDFM-ENISLEGKTNFFEKRVGEYQRMGVMS 52


>gi|291092706|gb|ADD74390.1| ribonucleotide reductase small subunit [uncultured virus]
          Length = 181

 Score = 67.3 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 6/59 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
           M G+    + I RDE LH +F   +  +      H+  K        ++ EA   E  +
Sbjct: 128 MHGLTFSNELISRDEGLHCDFACLLYTK------HIVHKLPNNVIYNIVREAVHAESIF 180


>gi|289423472|ref|ZP_06425274.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus anaerobius 653-L]
 gi|289156106|gb|EFD04769.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus anaerobius 653-L]
          Length = 337

 Score = 67.3 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 7/132 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+   E    I+RDESLH  +   +  +   E  +    E +     +L E    E  Y 
Sbjct: 196 MIASGEIISLILRDESLHGKYIGLLAQEKLREFSYDDRNELKDAVYRLLKELMENEEKYT 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
                   +GL       ++++ AN     +G E  +K    N    +   +  + +  +
Sbjct: 256 RMLYEG--LGL-EDQVINFLRYNANSALVNLGFEEFYKVEPVNAI--VLNGLSTETKTHD 310

Query: 119 FFETRVTEYQQG 130
           FF T+   YQ+G
Sbjct: 311 FFSTKGNGYQKG 322


>gi|13095637|ref|NP_076552.1| ribonucleotide reductase small subunit [Bovine herpesvirus 4]
 gi|12802587|gb|AAK07979.1|AF318573_59 ribonucleotide reductase small subunit [Bovine herpesvirus 4]
          Length = 305

 Score = 67.3 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 47/139 (33%), Gaps = 18/139 (12%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           G+     YI RDE LH      + N +    + PH+           +  EA  +E  + 
Sbjct: 179 GVCLANDYISRDELLHTRAAALLYNTMVSGADKPHML------WVHNLFKEAVEVEHEFI 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGL---EPLFKYTENPFPWMSEVIDLKKEK 117
                 G   +N      +++  A+R    I L          + P           K  
Sbjct: 233 -LVKSSGVSAVNVDDIRSFLEATADRILKSINLPPIYGTPPPPKCPL----VYTGCVKNV 287

Query: 118 NFFETRVTEYQQGAGLKWD 136
           NFFE   ++Y   + +K D
Sbjct: 288 NFFERDNSDYT--SSIKDD 304


>gi|193890961|gb|ACF28634.1| ribonucleotide reductase [Amphidinium carterae]
          Length = 213

 Score = 67.3 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 7/55 (12%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL 55
           M G+    + I RDE LH +F   +  +++   P            +++  A  +
Sbjct: 166 MPGLTFSNELISRDEGLHADFACLIYRKLQNHLPE-------DVVHSIMRGAVEV 213


>gi|296330954|ref|ZP_06873429.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305674472|ref|YP_003866144.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. spizizenii str. W23]
 gi|296151959|gb|EFG92833.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305412716|gb|ADM37835.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. spizizenii str. W23]
          Length = 329

 Score = 67.3 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 62/137 (45%), Gaps = 9/137 (6%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDE++H  +   +  +I  +       E +  +  +L+E    E+ Y  + 
Sbjct: 187 SGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKKAELRGFAIDLLNELYENELEYTEDL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFE 121
                VGL+    ++++++ AN+    +G +P F+  + NP   +   ++ K +  +FF 
Sbjct: 247 Y--DQVGLS-HDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFS 301

Query: 122 TRVTEYQQGAG--LKWD 136
            +   Y++     LK D
Sbjct: 302 MKGNGYKKATVEPLKDD 318


>gi|300870141|ref|YP_003785012.1| ribonucleotide-diphosphate reductase subunit beta [Brachyspira
           pilosicoli 95/1000]
 gi|300687840|gb|ADK30511.1| ribonucleotide-diphosphate reductase beta subunit [Brachyspira
           pilosicoli 95/1000]
          Length = 359

 Score = 67.3 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 11/145 (7%)

Query: 2   VGIAEQYQYIMRDE-SLHLNFGIDVINQIKIENPHLWTKEFQ-----QKSRTMLHEATLL 55
            G  +  + I  DE + H+  G +VI  ++ +    + + F        ++ M       
Sbjct: 215 TGFTKTIKLIAHDELNTHVPTGKNVIGILRKDANQGFKELFDSGWYNDMAKEMTEFTVNE 274

Query: 56  EIAYAHETM-PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVID 112
           EI +A      K   G+N+   E ++++ A  R   +G+E  +  +   +   W +   D
Sbjct: 275 EIKWAKYLFDGKEVSGINSSVSEHFIKYWAGVRLKDLGVETEYLKEPKSDIIDWFNAYRD 334

Query: 113 LKKEKNF-FETRVTEYQQGAGLKWD 136
           + K+     ET  T YQ+G  LK D
Sbjct: 335 INKQNAALQETTNTSYQKG-ALKND 358


>gi|169827410|ref|YP_001697568.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
           sphaericus C3-41]
 gi|168991898|gb|ACA39438.1| Ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
           sphaericus C3-41]
          Length = 318

 Score = 66.9 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 17/141 (12%)

Query: 4   IAEQYQYIMRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
            AE    I+RDES+H      F  ++  Q   E         Q     +L +    E+ Y
Sbjct: 181 SAEIISLILRDESIHGVAVGFFAQNLYKQFSKEKQE----ALQLWGYELLLDLYQNEMKY 236

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK- 117
             +       GL+    + Y+++ AN+    +G E +F   E NP   +   I  +    
Sbjct: 237 TEDIY--AETGLSPE-VKAYVRYNANKALMNVGFEAMFPEEEVNPI--VMNGIRNEGSTY 291

Query: 118 NFFETRVTEYQQG--AGLKWD 136
           +FF  +   Y +   A +  D
Sbjct: 292 DFFSQKGATYAKAKVAPITDD 312


>gi|52080345|ref|YP_079136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           licheniformis ATCC 14580]
 gi|52785724|ref|YP_091553.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           licheniformis ATCC 14580]
 gi|319645870|ref|ZP_08000100.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
           BT1B_CT2]
 gi|52003556|gb|AAU23498.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           licheniformis ATCC 14580]
 gi|52348226|gb|AAU40860.1| NrdF [Bacillus licheniformis ATCC 14580]
 gi|317391620|gb|EFV72417.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
           BT1B_CT2]
          Length = 325

 Score = 66.9 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 15/135 (11%)

Query: 4   IAEQYQYIMRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
             E    I+RDE++H         ++ NQ   E       E    S  +L E    E+ Y
Sbjct: 187 SGEIINLILRDEAIHGVYVGLLAQEIYNQQTPEKKE----ELYAFSIDLLKELYENELEY 242

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK- 117
             +      VGL+    ++++++ AN+    +G E  F+  E NP   +   ++ K +  
Sbjct: 243 TEDLY--DQVGLS-HDVKKFIRYNANKALMNLGFEAYFEEEEINPI--VLNGLNTKTKSH 297

Query: 118 NFFETRVTEYQQGAG 132
           +FF  +   Y++   
Sbjct: 298 DFFSMKGNGYKKATV 312


>gi|126650012|ref|ZP_01722245.1| ribonucleotide-diphosphate [Bacillus sp. B14905]
 gi|126593184|gb|EAZ87146.1| ribonucleotide-diphosphate [Bacillus sp. B14905]
          Length = 322

 Score = 66.9 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 17/141 (12%)

Query: 4   IAEQYQYIMRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
            AE    I+RDES+H      F  ++  Q   E         Q     +L +    E+ Y
Sbjct: 185 SAEIISLILRDESIHGVAVGFFAQNLYKQFSKEKQE----SLQLWGYELLLDLYQNEMKY 240

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK- 117
             +       GL+    + Y+++ AN+    +G E +F   E NP   +   I  +    
Sbjct: 241 TEDIY--AETGLSPE-VKAYVRYNANKALMNVGFEAMFPEEEVNPI--VMNGIRNEGSTY 295

Query: 118 NFFETRVTEYQQG--AGLKWD 136
           +FF  +   Y +   A +  D
Sbjct: 296 DFFSQKGATYAKAKVAPITDD 316


>gi|296127719|ref|YP_003634971.1| ribonucleotide reductase [Brachyspira murdochii DSM 12563]
 gi|296019535|gb|ADG72772.1| ribonucleotide reductase [Brachyspira murdochii DSM 12563]
          Length = 357

 Score = 66.9 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 11/144 (7%)

Query: 3   GIAEQYQYIMRDE-SLHLNFGIDVINQIKIENPHLWTKEFQ-----QKSRTMLHEATLLE 56
           G  +  + I  DE ++H+  G +++  ++ E    ++  F+       +R M       E
Sbjct: 214 GFTKTIKLIAHDELNVHVPTGKNLMTILRKEAHQGFSHLFKNGWFYDTARAMTEYTVNEE 273

Query: 57  IAYAHETM-PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP--FPWMSEVIDL 113
           I +A      K   G+N+   E ++++ A  R   I +E  +   +      W +   D+
Sbjct: 274 IKWAKYLFDGKEVSGINSSVSEHFIKYWAGIRLKDIDVETEYLSEKKSDIIDWFNSYRDI 333

Query: 114 KKEKNF-FETRVTEYQQGAGLKWD 136
            K+     ET  T YQ+G  LK D
Sbjct: 334 NKQNAALQETTNTSYQKG-ALKND 356


>gi|324525159|gb|ADY48515.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 240

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 7/55 (12%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL 55
           M G+    + I RDE LH +F   +   IK        K  Q++   ++ EA  L
Sbjct: 193 MKGLTHSNELISRDEGLHRDFACLLYKYIKH-------KPSQEQVYEIIKEAVSL 240


>gi|56964873|ref|YP_176604.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus clausii
           KSM-K16]
 gi|56911116|dbj|BAD65643.1| ribonucleoside-diphosphate reductase beta chain [Bacillus clausii
           KSM-K16]
          Length = 334

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 59/131 (45%), Gaps = 7/131 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDE++H  +   +  +I  +      KE  Q +  +L E    E+ Y  + 
Sbjct: 187 SGEIINLILRDEAIHGVYIGLLAQEIYNKQSPDTQKELHQFAIELLDELYKNELLYTEDL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFE 121
                VGL+    ++++++ AN+    +G +P F+  + NP   +   ++ K +  +FF 
Sbjct: 247 Y--DQVGLS-HDVKKFIRYNANKALMNLGFDPYFEDEDINPI--VLNGLNTKTKSHDFFS 301

Query: 122 TRVTEYQQGAG 132
            +   Y++   
Sbjct: 302 MKGNGYKKATV 312


>gi|9629622|ref|NP_044898.1| ribonucleotide reductase subunit 2 [Murid herpesvirus 4]
 gi|6625623|gb|AAF19324.1|AF105037_56 60 [murid herpesvirus 4]
 gi|1850859|emb|CAA70275.1| ribonucleotide reductase, small subunit [Murid herpesvirus 4]
 gi|2317992|gb|AAB66450.1| ribonucleotide reductase small [murid herpesvirus 4]
          Length = 305

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 16/132 (12%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           GI     YI +DE LH      + N +    E P           + +  EA  +E ++ 
Sbjct: 179 GICLANDYISKDELLHTRAAAVLYNSLIPAKERPD------AAWIKRLFQEAVEVEYSFI 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEK 117
                K    +     ++++Q   +R    IG+EP++        P           K  
Sbjct: 233 A-AKSKNVTLVVPGEIKKFLQATCDRILQSIGVEPIYGSHAPVTCPLS----YNGCIKSV 287

Query: 118 NFFETRVTEYQQ 129
           NFFE   T+Y  
Sbjct: 288 NFFEREGTDYST 299


>gi|149277655|ref|ZP_01883795.1| ribonucleotide-diphosphate [Pedobacter sp. BAL39]
 gi|149231343|gb|EDM36722.1| ribonucleotide-diphosphate [Pedobacter sp. BAL39]
          Length = 327

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 19/137 (13%)

Query: 1   MVGIAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           MV  A+  + I+ DES+H  F      DV  ++   NP     + + K   +L E    E
Sbjct: 184 MVASADIIKKIVADESIHGVFVGLLAQDVYKKLP--NPE----KCKAKLEALLMELYENE 237

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 116
           + Y  E   +  VGL A   ++Y+++ AN+    +G E LF+    P   +  +  L  E
Sbjct: 238 LKYTDELYTE--VGLTAE-VKEYVRYNANKAMMNLGFEELFEVK--PINAIV-LNGLNVE 291

Query: 117 K---NFFETRVTEYQQG 130
               +FF  + T Y++ 
Sbjct: 292 TTQHDFFSKKSTNYEKS 308


>gi|213420352|ref|ZP_03353418.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 88

 Score = 66.2 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 61  HETMPKG-FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKN 118
                 G  +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +  
Sbjct: 1   DYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVA 60

Query: 119 FFETRVTEY 127
             E  V+ Y
Sbjct: 61  PQEVEVSSY 69


>gi|154686152|ref|YP_001421313.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           amyloliquefaciens FZB42]
 gi|154352003|gb|ABS74082.1| NrdF [Bacillus amyloliquefaciens FZB42]
          Length = 329

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 60/131 (45%), Gaps = 7/131 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDE++H  +   +  +I  +       E ++ +  +L++    E+ Y  + 
Sbjct: 187 SGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFE 121
                VGL+    ++++++ AN+    +G +P F+  + NP   +   ++ K +  +FF 
Sbjct: 247 Y--DQVGLS-HDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFS 301

Query: 122 TRVTEYQQGAG 132
            +   Y++   
Sbjct: 302 MKGNGYKKATV 312


>gi|308173699|ref|YP_003920404.1| ribonucleoside-diphosphate reductase minor subunit [Bacillus
           amyloliquefaciens DSM 7]
 gi|307606563|emb|CBI42934.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           amyloliquefaciens DSM 7]
 gi|328553367|gb|AEB23859.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           amyloliquefaciens TA208]
 gi|328911843|gb|AEB63439.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           amyloliquefaciens LL3]
          Length = 329

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 59/131 (45%), Gaps = 7/131 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDE++H  +   +  +I  +       E ++ +  +L E    E+ Y  + 
Sbjct: 187 SGEIINLILRDEAIHGVYVGLLAQEIYNKQTEAKKAELREFAIELLEELYHNELEYTEDL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFE 121
                VGL+    ++++++ AN+    +G +P F+  + NP   +   ++ K +  +FF 
Sbjct: 247 Y--DQVGLS-HDVKKFIRYNANKALMNLGFDPYFEEEDINPI--VLNGLNTKTKSHDFFS 301

Query: 122 TRVTEYQQGAG 132
            +   Y++   
Sbjct: 302 MKGNGYKKATV 312


>gi|9630287|ref|NP_046714.1| hypothetical protein SPBc2p162 [Bacillus phage SPBc2]
 gi|50812253|ref|NP_389886.2| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|75090792|sp|O64174|BNRDF_BPSPC RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|81637506|sp|O30601|YOSP_BACSU RecName: Full=SPBc2 prophage-derived ribonucleoside-diphosphate
           reductase subunit beta; AltName: Full=Ribonucleotide
           reductase small subunit
 gi|2522310|gb|AAB92486.1| YojQ/S [Bacillus subtilis subsp. subtilis str. 168]
 gi|3025640|gb|AAC13135.1| unknown [Bacillus phage SPbeta]
 gi|32468776|emb|CAB13896.2| SPbeta phage ribonucleoside-diphosphate reductase, beta subunit
           [Bacillus subtilis subsp. subtilis str. 168]
          Length = 329

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 60/131 (45%), Gaps = 7/131 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDE++H  +   +  +I  +      KE    +  +L E    E+ Y  + 
Sbjct: 187 SGEIINLIIRDEAIHGVYVGLLAQEIYKKQTPQKQKELYAWALNLLQELYENELEYTEDV 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFE 121
                VGL AP  ++++++ AN+  + +G +  F+  + NP   +   ++ K +  +FF 
Sbjct: 247 Y--DQVGL-APDVKKFIRYNANKALNNLGFDHWFEEEDVNPI--VINGLNTKTKSHDFFS 301

Query: 122 TRVTEYQQGAG 132
           T+   Y++   
Sbjct: 302 TKGNGYKKATV 312


>gi|294669615|ref|ZP_06734682.1| hypothetical protein NEIELOOT_01516 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308528|gb|EFE49771.1| hypothetical protein NEIELOOT_01516 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 296

 Score = 65.4 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI--ENPHL--WTKEFQQKSRTMLHEATLLE 56
           M G A+  + I RDE+LHL     ++N ++   ++P +     E Q +   +  +A   E
Sbjct: 225 MEGNAKIIKLIARDEALHLTSTQHMLNLMRAGVDDPEMAEIAVELQDECFKLFKKAAEQE 284

Query: 57  I 57
            
Sbjct: 285 K 285


>gi|291295355|ref|YP_003506753.1| ribonucleoside-diphosphate reductase [Meiothermus ruber DSM 1279]
 gi|290470314|gb|ADD27733.1| Ribonucleoside-diphosphate reductase [Meiothermus ruber DSM 1279]
          Length = 429

 Score = 65.4 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 13/136 (9%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E    I+RDES+H  +   +  ++    P    K  ++   +ML     LE  Y+
Sbjct: 184 MTSSGEIINLIIRDESIHGVYVGLLAQEVYAGLPEAQQKTAREGVYSMLEHLAGLEERYS 243

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
              M    +GL   +   + ++ A++    +GLEP F  +    NP      +  L    
Sbjct: 244 R--MLYTPLGLT-EAVVTFSRYNADKALMNLGLEPYFGVSAEAVNP----VVLAGLSTHT 296

Query: 118 ---NFFETRVTEYQQG 130
              +FF T+   Y + 
Sbjct: 297 KNHDFFSTKGNGYVKA 312


>gi|330941351|gb|EGH44203.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 317

 Score = 65.0 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/38 (84%), Positives = 36/38 (94%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWT 38
           M G+AEQ+QYI+RDES+HLNFGIDVINQIKIENPHLW 
Sbjct: 280 MTGVAEQFQYILRDESMHLNFGIDVINQIKIENPHLWD 317


>gi|262285102|gb|ACY41130.1| ribonucleotide reductase subunit 2 [Wood mouse herpesvirus]
          Length = 305

 Score = 65.0 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 45/132 (34%), Gaps = 16/132 (12%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIK--IENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           GI     YI +DE LH      + N +    E P           + +  EA  +E A+ 
Sbjct: 179 GICLANDYISKDELLHTRAAAVLYNTLIPAKERPD------PAWIKRLFQEAVEVEYAFI 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEK 117
                K    +     ++++Q   +R    IG+  L+        P           K  
Sbjct: 233 A-AKSKNVTLVVPGEIKRFLQATCDRILQSIGVGALYGSHAPVTCPLS----YNGCIKSV 287

Query: 118 NFFETRVTEYQQ 129
           NFFE   T+Y  
Sbjct: 288 NFFEREGTDYST 299


>gi|327440528|dbj|BAK16893.1| ribonucleotide reductase, beta subunit [Solibacillus silvestris
           StLB046]
          Length = 320

 Score = 65.0 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 15/140 (10%)

Query: 4   IAEQYQYIMRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
            AE    I+RDES+H      F  ++      E      +E        L +    E+ Y
Sbjct: 185 SAEVISLILRDESIHGVAVGFFAQNIFKTFTEEK----QQELTLWGYEYLLDLYQNEMKY 240

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKN 118
             +       GL+    ++Y+++ AN+    +GL+ +F   E NP   M+ + +     +
Sbjct: 241 TDDLY--AETGLSPE-VKKYVRYNANKALMNLGLDTMFPDEEVNPVV-MNGISNTGSTYD 296

Query: 119 FFETRVTEY--QQGAGLKWD 136
           FF  + + Y   + A +  D
Sbjct: 297 FFSQKGSTYAVAKVAPITDD 316


>gi|46255232|ref|YP_006144.1| ribonucleoside-diphosphate reductase beta chain [Thermus
           thermophilus HB27]
 gi|46198081|gb|AAS82491.1| ribonucleoside-diphosphate reductase beta chain [Thermus
           thermophilus HB27]
          Length = 324

 Score = 64.6 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 54/132 (40%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E++H  FG++++  ++ E+P    + FQ+++  +       E A   
Sbjct: 182 KGISNAIEATSKEENVHGLFGVELLRLLRTEHPEALGEGFQEEALRLAQGLFRAEEALLD 241

Query: 62  ETMPKGFVGL-NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEK 117
                G   L       ++++   N+     GL P F   E       W +  +   KE 
Sbjct: 242 WLFSAGEPALVGHRETLEFLKGRYNQVLALHGLPPPFPVDEKALRDTEWFTLELLADKEV 301

Query: 118 NFFETRVTEYQQ 129
           +FF  R   Y +
Sbjct: 302 DFFNKRSVAYAR 313


>gi|169630485|ref|YP_001704134.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           abscessus ATCC 19977]
 gi|169242452|emb|CAM63480.1| Probable ribonucleoside-diphosphate reductase beta subunit
           [Mycobacterium abscessus]
          Length = 324

 Score = 64.6 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E ++ +  +L+E    E  Y  + 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQRGLERVDEAKRAEIKEYTYDLLYELYENETDYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 246 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPREETDVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVNTEDEDWD 323


>gi|154508355|ref|ZP_02043997.1| hypothetical protein ACTODO_00852 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797989|gb|EDN80409.1| hypothetical protein ACTODO_00852 [Actinomyces odontolyticus ATCC
           17982]
          Length = 425

 Score = 64.6 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E+      + +  + ++L+E    E  Y  + 
Sbjct: 287 TADLIRLIIRDEAVHGYYIGYKYQLAVNESSQERQDDLRDYTYSLLYELYENEEQYTEDL 346

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
                +GL     ++++++ AN+    +G E LF       NP   +   +    ++N  
Sbjct: 347 Y--DPLGLT-EDVKKFLRYNANKALMNLGYEALFPADATDVNPA--ILAALSPNADENHD 401

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 402 FFSGSGSSYVMGEVVDTEDEDWD 424


>gi|120403054|ref|YP_952883.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955872|gb|ABM12877.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium vanbaalenii PYR-1]
          Length = 324

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  + 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQKGLALESEATRQELKDYTYELLFELYDNEVEYTQDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 246 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVNTEDEDWD 323


>gi|32453719|ref|NP_861928.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           RB69]
 gi|32350538|gb|AAP76137.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           RB69]
          Length = 390

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 25/128 (19%)

Query: 1   MVGIAEQYQYIMRDESLHL--------NFGIDV-----INQIKIENPHLWTKEFQQKSRT 47
           M G A+  ++I RDE LHL        NF + +        +K  N    T  ++   + 
Sbjct: 235 MEGNAKIMKFIARDEQLHLRVLSTLSVNFNLVLMAMSGFKLLKNVNKKQLTFLWKLIVKY 294

Query: 48  MLHEATLLEIAYAHETMPKGF-VGLNAPSCEQYMQFIANRRCHQIGLE-PLFKY-TENPF 104
                      +A      G   G+N  S   ++ ++   R  Q GL  P+    T++P+
Sbjct: 295 ---------KEWAAHLFKDGTCPGINTQSMCAFVDYLTVSRMKQCGLPCPITDAPTKHPY 345

Query: 105 PWMSEVID 112
           PW+ E ++
Sbjct: 346 PWIREYLN 353


>gi|213855386|ref|ZP_03383626.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
          Length = 80

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 68  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTE 126
            +GLN     QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ 
Sbjct: 1   MIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSS 60

Query: 127 Y 127
           Y
Sbjct: 61  Y 61


>gi|108798796|ref|YP_638993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. MCS]
 gi|119867913|ref|YP_937865.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. KMS]
 gi|126434397|ref|YP_001070088.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. JLS]
 gi|108769215|gb|ABG07937.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. MCS]
 gi|119694002|gb|ABL91075.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. KMS]
 gi|126234197|gb|ABN97597.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. JLS]
          Length = 320

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  +L E    E+ Y  + 
Sbjct: 182 TADMIRLIIRDEAVHGYYIGYKFQKGLALQDPATQAELKDYTYELLFELYDNEVEYTQDL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 242 Y--DSVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 296

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 297 FFSGSGSSYVIGKAVVTEDEDWD 319


>gi|269121363|ref|YP_003309540.1| ribonucleoside-diphosphate reductase [Sebaldella termitidis ATCC
           33386]
 gi|268615241|gb|ACZ09609.1| Ribonucleoside-diphosphate reductase [Sebaldella termitidis ATCC
           33386]
          Length = 331

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 61/132 (46%), Gaps = 7/132 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    +  + I+ DES+H  F   +  +   +      +  ++  + +++     E+ Y 
Sbjct: 184 MGASCDIIKKIIADESIHGVFVGLLAQEFFKKFTPEDQQRIEKNLKELMYVLYENELKYT 243

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
            E   +  +GL+    ++Y+++ AN+    +G +  F+  E NP   +   ++++  + +
Sbjct: 244 DEVYTE--IGLSGD-VKEYIRYNANKALMNLGFDEEFEVKEVNPI--VLNGLNVETTQHD 298

Query: 119 FFETRVTEYQQG 130
           FF  + T Y++ 
Sbjct: 299 FFSKKSTNYEKA 310


>gi|183981661|ref|YP_001849952.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
           [Mycobacterium marinum M]
 gi|183174987|gb|ACC40097.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
           [Mycobacterium marinum M]
          Length = 324

 Score = 63.9 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  +L E    E+ Y  + 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVEYTQDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 246 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVVTQDEDWD 323


>gi|118617484|ref|YP_905816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           ulcerans Agy99]
 gi|118569594|gb|ABL04345.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
           [Mycobacterium ulcerans Agy99]
          Length = 324

 Score = 63.9 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  +L E    E+ Y  + 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVEYTQDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 246 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVATQDEDWD 323


>gi|15842613|ref|NP_337650.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CDC1551]
 gi|31794226|ref|NP_856719.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis AF2122/97]
 gi|57117051|ref|YP_177921.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Rv]
 gi|121638932|ref|YP_979156.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|148662901|ref|YP_001284424.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|148824239|ref|YP_001288993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis F11]
 gi|167969649|ref|ZP_02551926.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|215405040|ref|ZP_03417221.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|215412903|ref|ZP_03421607.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215428496|ref|ZP_03426415.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T92]
 gi|215432000|ref|ZP_03429919.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|215447324|ref|ZP_03434076.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|218754813|ref|ZP_03533609.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis GM 1503]
 gi|219559083|ref|ZP_03538159.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T17]
 gi|224991424|ref|YP_002646113.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253797854|ref|YP_003030855.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 1435]
 gi|254233678|ref|ZP_04927003.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis C]
 gi|254365678|ref|ZP_04981723.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254552123|ref|ZP_05142570.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|260188080|ref|ZP_05765554.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CPHL_A]
 gi|260202186|ref|ZP_05769677.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T46]
 gi|260206381|ref|ZP_05773872.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis K85]
 gi|289444611|ref|ZP_06434355.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289448726|ref|ZP_06438470.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CPHL_A]
 gi|289553161|ref|ZP_06442371.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 605]
 gi|289571250|ref|ZP_06451477.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T17]
 gi|289575758|ref|ZP_06455985.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis K85]
 gi|289746856|ref|ZP_06506234.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289751720|ref|ZP_06511098.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T92]
 gi|289755164|ref|ZP_06514542.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289759173|ref|ZP_06518551.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|289763226|ref|ZP_06522604.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis GM 1503]
 gi|294993448|ref|ZP_06799139.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 210]
 gi|297635679|ref|ZP_06953459.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN 4207]
 gi|297732677|ref|ZP_06961795.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN R506]
 gi|298526518|ref|ZP_07013927.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306777354|ref|ZP_07415691.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu001]
 gi|306781258|ref|ZP_07419595.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu002]
 gi|306785899|ref|ZP_07424221.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu003]
 gi|306790253|ref|ZP_07428575.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu004]
 gi|306794748|ref|ZP_07433050.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu005]
 gi|306798990|ref|ZP_07437292.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu006]
 gi|306804833|ref|ZP_07441501.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu008]
 gi|306809026|ref|ZP_07445694.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu007]
 gi|306969126|ref|ZP_07481787.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu009]
 gi|306973470|ref|ZP_07486131.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu010]
 gi|307081181|ref|ZP_07490351.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu011]
 gi|307085780|ref|ZP_07494893.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu012]
 gi|313660009|ref|ZP_07816889.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN V2475]
 gi|81671996|sp|Q50549|RIR2B_MYCTU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta
           nrdF2; AltName: Full=Ribonucleoside-diphosphate
           reductase nrdF2; AltName: Full=Ribonucleotide reductase
           R2-2 small subunit
 gi|1395209|gb|AAB81406.1| ribonucleotide reductase R2-2 small subunit [Mycobacterium
           tuberculosis]
 gi|13882928|gb|AAK47464.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Mycobacterium tuberculosis CDC1551]
 gi|31619821|emb|CAD96761.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium bovis AF2122/97]
 gi|41352780|emb|CAE55544.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium tuberculosis H37Rv]
 gi|121494580|emb|CAL73061.1| Ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599207|gb|EAY58311.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis C]
 gi|134151191|gb|EBA43236.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148507053|gb|ABQ74862.1| ribonucleoside-diphosphate reductase subunit beta NrdF2
           [Mycobacterium tuberculosis H37Ra]
 gi|148722766|gb|ABR07391.1| ribonucleoside-diphosphate reductase beta subunit nrdF2
           [Mycobacterium tuberculosis F11]
 gi|224774539|dbj|BAH27345.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253319357|gb|ACT23960.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 1435]
 gi|289417530|gb|EFD14770.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289421684|gb|EFD18885.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CPHL_A]
 gi|289437793|gb|EFD20286.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 605]
 gi|289540189|gb|EFD44767.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis K85]
 gi|289545004|gb|EFD48652.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T17]
 gi|289687384|gb|EFD54872.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289692307|gb|EFD59736.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T92]
 gi|289695751|gb|EFD63180.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289710732|gb|EFD74748.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis GM 1503]
 gi|289714737|gb|EFD78749.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|298496312|gb|EFI31606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308214246|gb|EFO73645.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu001]
 gi|308325901|gb|EFP14752.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu002]
 gi|308329423|gb|EFP18274.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu003]
 gi|308333268|gb|EFP22119.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu004]
 gi|308336923|gb|EFP25774.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu005]
 gi|308340739|gb|EFP29590.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu006]
 gi|308344606|gb|EFP33457.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu007]
 gi|308348554|gb|EFP37405.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu008]
 gi|308353280|gb|EFP42131.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu009]
 gi|308357113|gb|EFP45964.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu010]
 gi|308361065|gb|EFP49916.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu011]
 gi|308364701|gb|EFP53552.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu012]
 gi|323718280|gb|EGB27458.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CDC1551A]
 gi|326902729|gb|EGE49662.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis W-148]
 gi|328457631|gb|AEB03054.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 4207]
          Length = 324

 Score = 63.9 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +       +   E +  +  +L E    E+ Y  + 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 246 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVVTEDDDWD 323


>gi|54026269|ref|YP_120511.1| ribonucleotide-diphosphate reductase subunit beta [Nocardia
           farcinica IFM 10152]
 gi|54017777|dbj|BAD59147.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Nocardia farcinica IFM 10152]
          Length = 320

 Score = 63.5 bits (154), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L+E    E+ Y  + 
Sbjct: 182 TADMIRLIIRDEAVHGYYIGYKYQRGLEQVSEAEREELKNYTFELLYELYENEVEYTQDL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     + ++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 242 Y--DEVGLT-EDVKTFLRYNANKALMNLGYEGLFPADETRVNPAILSALSPNADENH--D 296

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 297 FFSGSGSSYVIGKAVNTEDEDWD 319


>gi|315445193|ref|YP_004078072.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. Spyr1]
 gi|315263496|gb|ADU00238.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. Spyr1]
          Length = 320

 Score = 63.5 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  + 
Sbjct: 182 TADMIRLIIRDEAVHGYYIGYKFQKGLALADDATRQELKDYTYELLFELYDNEVEYTQDL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 242 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 296

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 297 FFSGSGSSYVIGKAVVTEDEDWD 319


>gi|157692410|ref|YP_001486872.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus pumilus
           SAFR-032]
 gi|194015081|ref|ZP_03053698.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           pumilus ATCC 7061]
 gi|157681168|gb|ABV62312.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus pumilus
           SAFR-032]
 gi|194014107|gb|EDW23672.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           pumilus ATCC 7061]
          Length = 326

 Score = 63.5 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 9/137 (6%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDE++H  +   +  +I  +      KE    S  +L+E    E+ Y  + 
Sbjct: 187 SGEIINLILRDEAIHGVYVGLLAQEIYNKQTPDVQKELYDFSIDLLNELYENELHYTEDI 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFE 121
                V L+    ++++++ AN+    +G  P F+  E NP   +   ++ K +  +FF 
Sbjct: 247 Y--DQVNLS-HDVKKFIRYNANKALMNLGFAPYFEEEEINPI--VLNGLNTKTKSHDFFS 301

Query: 122 TRVTEYQQGAG--LKWD 136
            +   Y++     LK D
Sbjct: 302 MKGNGYKKATVEPLKDD 318


>gi|289705575|ref|ZP_06501967.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus
           luteus SK58]
 gi|289557804|gb|EFD51103.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus
           luteus SK58]
          Length = 323

 Score = 63.5 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +     P    +E +  +  +L E    E+ Y H+ 
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKYQRSIETLPEEKREELKAFTFELLFELYENEVEYTHDL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKN--FF 120
                VGL A   ++++ + AN+    +G EP+F   T N  P +   +    ++N  FF
Sbjct: 245 Y--DAVGL-AEDVKKFLHYNANKALMNLGYEPMFPAETTNVNPAILSALSPNSDENHDFF 301

Query: 121 ETRVTEYQQGAG-----LKWD 136
               + Y  G         WD
Sbjct: 302 SGSGSSYVIGKAENTEDEDWD 322


>gi|323495950|ref|ZP_08101016.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
 gi|323318985|gb|EGA71930.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
          Length = 323

 Score = 63.5 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 13/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E       + + ++ +++     +E  Y    
Sbjct: 185 TADLIRLIIRDEAIHGYYIGYKFQLAFNELSEQEQAKVKDEAYSLMFSLYEIESQYTESL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNF 119
                VGL     + ++ + AN+    +G EPLF       NP   M+ +  +  +  +F
Sbjct: 245 Y--DQVGLT-EDVKHFLHYNANKALMNLGFEPLFPDELCQVNPAI-MAALSPNADENHDF 300

Query: 120 FETRVTEYQQGAGL-----KWD 136
           F    + Y  G  +      WD
Sbjct: 301 FSGSGSSYVIGKAVATEDEDWD 322


>gi|15827930|ref|NP_302193.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           leprae TN]
 gi|221230407|ref|YP_002503823.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           leprae Br4923]
 gi|14195114|sp|Q9CBQ2|RIR2_MYCLE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|13093483|emb|CAC30684.1| ribonucleotide reductase small subunit [Mycobacterium leprae]
 gi|219933514|emb|CAR71826.1| ribonucleotide reductase small subunit [Mycobacterium leprae
           Br4923]
          Length = 325

 Score = 63.5 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +  +        E ++ +  +L E    E+ Y  + 
Sbjct: 187 TADMIRLIIRDEAVHGYYIGYKFQRGLVLVDDARRAELKEYTYELLFELYDNEVEYTQDL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
             +  VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 247 YDR--VGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 301

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 302 FFSGSGSSYVIGKAVVTEDEDWD 324


>gi|304406354|ref|ZP_07388010.1| Ribonucleoside-diphosphate reductase [Paenibacillus curdlanolyticus
           YK9]
 gi|304344412|gb|EFM10250.1| Ribonucleoside-diphosphate reductase [Paenibacillus curdlanolyticus
           YK9]
          Length = 318

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 1   MVGIAEQYQYIMRDESLH----LNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           M    E    I+RDES+H         +V   +  E       E   + R ++      E
Sbjct: 179 MTSSGEIIDLILRDESIHGLYVGVLAQEVYRDLTPEERG----EADTELRELIDRLHANE 234

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKK 115
             Y  E      VGL A     Y+++  N+    +GL+P+F   E NP  +    I  + 
Sbjct: 235 EVYTKELYSG--VGL-ADEVLTYVRYNCNKGLMNLGLDPIFPEEEINPIVF--NGISTRT 289

Query: 116 EK-NFFETRVTEYQQ 129
           ++ +FF  +   Y +
Sbjct: 290 KQHDFFSKKGNGYVR 304


>gi|145224865|ref|YP_001135543.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           gilvum PYR-GCK]
 gi|145217351|gb|ABP46755.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium gilvum PYR-GCK]
          Length = 320

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  + 
Sbjct: 182 TADMIRLIIRDEAVHGYYIGYKFQKGLALADDATRQELKDYTYELLFELYDNEVEYTQDL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 242 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 296

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 297 FFSGSGSSYVIGKAVITEDEDWD 319


>gi|239917558|ref|YP_002957116.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
 gi|281413955|ref|ZP_06245697.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
 gi|239838765|gb|ACS30562.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
          Length = 323

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +     P    +E +  +  +L E    E+ Y H+ 
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKYQRSIETLPEEKREELKAFTFELLFELYENEVEYTHDL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKN--FF 120
                VGL A   ++++ + AN+    +G EP+F   T N  P +   +    ++N  FF
Sbjct: 245 Y--DAVGL-AEDVKKFLHYNANKALMNLGYEPMFPAETTNVNPAILSALSPNSDENHDFF 301

Query: 121 ETRVTEYQQGAG-----LKWD 136
               + Y  G         WD
Sbjct: 302 SGSGSSYVIGKAENTEDEDWD 322


>gi|55978391|ref|YP_145447.1| ribonucleoside-diphosphate reductase, beta subunit [Thermus
           thermophilus HB8]
 gi|55773564|dbj|BAD72004.1| ribonucleoside-diphosphate reductase, beta subunit [Thermus
           thermophilus HB8]
          Length = 294

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GI+   +   ++E++H  FG++++  ++ E+P    + FQ+++  +       E A   
Sbjct: 152 KGISNAIEATSKEENVHGLFGVELLRLLRTEHPEALGEGFQEEALRLAQGLFRAEEALLD 211

Query: 62  ETMPKGFVGL-NAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF---PWMSEVIDLKKEK 117
                G   L       ++++   N+     GL P+F   E       W +  +   KE 
Sbjct: 212 WLFSAGEPALVGHRETLEFLKGRYNQVLALHGLPPVFSVDEKALRDTEWFTLELLADKEV 271

Query: 118 NFFETRVTEYQQ 129
           +FF  R   Y +
Sbjct: 272 DFFNKRSVAYAR 283


>gi|158079504|ref|YP_001504317.1| putative ribonucleotide reductase [Enterococcus phage phiEF24C]
 gi|157890348|dbj|BAF81476.1| putative ribonucleotide reductase [Enterococcus phage phiEF24C]
          Length = 327

 Score = 63.1 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV  AE  + I+RDES+H  +          + P    KE +Q    +  +    E  Y 
Sbjct: 179 MVNTAEIIKLIIRDESVHGTYIGYKYQLGFNQLPETEQKEMEQWVIDLAFKLWENETQYT 238

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
            E   +  +G        ++++  N+    +G+ PLF  T    NP   M+ +       
Sbjct: 239 AELYSE--IGWTKD-VNTFLEYNLNKALANLGMNPLFPTTSADVNPIV-MNGISTTTSNH 294

Query: 118 NFF 120
           +FF
Sbjct: 295 DFF 297


>gi|328957625|ref|YP_004375011.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
 gi|328673949|gb|AEB29995.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
          Length = 320

 Score = 63.1 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 5/122 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +  +AE  + I+RDES+H  +          + P    +E +  +  +L +    E+ YA
Sbjct: 177 LPNVAEIIKLILRDESVHGTYIGYKFQIAFNQLPDDEKEEIKNWTYELLFKLYQNEVKYA 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKN 118
                   +G      + ++++ AN+    +G +PLF  T N      M+ +       +
Sbjct: 237 EYLY--DEIGWT-ERVKVFLRYNANKALQNLGFDPLFPDTANDVDPVIMNGISTGTSNHD 293

Query: 119 FF 120
           FF
Sbjct: 294 FF 295


>gi|226312721|ref|YP_002772615.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacillus
           brevis NBRC 100599]
 gi|226095669|dbj|BAH44111.1| ribonucleoside-diphosphate reductase beta chain [Brevibacillus
           brevis NBRC 100599]
          Length = 316

 Score = 63.1 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 15/135 (11%)

Query: 1   MVGIAEQYQYIMRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           M    E    I+RDES+H         +V   + +    +      ++   +LHE    E
Sbjct: 177 MTSSGEIIDLIVRDESIHGLYVGVLAQEVYQGLSV----VEQTAAIEELYALLHELQENE 232

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKK 115
            AY      +  +GL A     Y+++ AN+    +GL+PLF   E NP   +   I  + 
Sbjct: 233 EAYTTSLYTE--IGL-ADEVHAYVRYNANKALMNLGLDPLFPEEEVNPI--VLNGIRTQT 287

Query: 116 EK-NFFETRVTEYQQ 129
           ++ +FF  +   Y +
Sbjct: 288 KQHDFFSKKGNGYVR 302


>gi|296171158|ref|ZP_06852606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295894294|gb|EFG74049.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 324

 Score = 63.1 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  +L E    E+ Y  + 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDEAKRAELKDYTYELLFELYDNEVEYTQDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 246 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVVTEDEDWD 323


>gi|32709417|gb|AAP86727.1| NrdB [Enterobacteria phage LZ2]
          Length = 313

 Score = 63.1 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKI----ENPHLWTKEFQQKSRTMLHEATLLE 56
           M G A+  ++I RDE LHL     +I Q+++    +      +E +Q++  +  E    E
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGTQYIIRQLQLGTDGDEWVKIAQECEQEAVDIFMEVNRQE 296

Query: 57  IAYAHETMPKG-FVGLN 72
             +A      G   GLN
Sbjct: 297 KDWAVHLFKDGDVPGLN 313


>gi|254820788|ref|ZP_05225789.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           intracellulare ATCC 13950]
          Length = 324

 Score = 62.7 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  + 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDARKQELKDYTYELLFELYDNEVEYTQDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 246 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVVTEDEDWD 323


>gi|240169547|ref|ZP_04748206.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           kansasii ATCC 12478]
          Length = 320

 Score = 62.7 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +       +   E +  +  +L E    E+ Y  + 
Sbjct: 182 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDEVKRAELKDYTYELLFELYDNEVEYTQDL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 242 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 296

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 297 FFSGSGSSYVIGKAV 311


>gi|254505962|ref|ZP_05118107.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus 16]
 gi|219551185|gb|EED28165.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus 16]
          Length = 323

 Score = 62.7 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 13/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E       + + ++ +++     +E  Y    
Sbjct: 185 TADLIRLIIRDEAIHGYYIGYKFQLAFNELSQQEQAKVKDEAYSLMFSLYEIESQYTESL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNF 119
                VGL     + ++ + AN+    +G EPLF       NP   M+ +  +  +  +F
Sbjct: 245 Y--DQVGLT-EDVKHFLHYNANKALMNLGFEPLFPDELCQVNPAI-MAALSPNADENHDF 300

Query: 120 FETRVTEYQQGAGL-----KWD 136
           F    + Y  G  +      WD
Sbjct: 301 FSGSGSSYVIGKAVATEDEDWD 322


>gi|69245952|ref|ZP_00603724.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium DO]
 gi|227552561|ref|ZP_03982610.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium TX1330]
 gi|257880353|ref|ZP_05660006.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,230,933]
 gi|257882206|ref|ZP_05661859.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,502]
 gi|257885400|ref|ZP_05665053.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,501]
 gi|257888211|ref|ZP_05667864.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,141,733]
 gi|257891012|ref|ZP_05670665.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,410]
 gi|257894265|ref|ZP_05673918.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,408]
 gi|257896901|ref|ZP_05676554.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com12]
 gi|257899642|ref|ZP_05679295.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com15]
 gi|258614695|ref|ZP_05712465.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecium DO]
 gi|260562343|ref|ZP_05832857.1| ribonucleoside-diphosphate reductase [Enterococcus faecium C68]
 gi|261209282|ref|ZP_05923674.1| ribonucleoside-diphosphate reductase [Enterococcus faecium TC 6]
 gi|289567001|ref|ZP_06447402.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium D344SRF]
 gi|293378468|ref|ZP_06624631.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium PC4.1]
 gi|293553988|ref|ZP_06674590.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
 gi|293563177|ref|ZP_06677635.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1162]
 gi|293568383|ref|ZP_06679704.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1071]
 gi|293570828|ref|ZP_06681875.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
 gi|294615274|ref|ZP_06695151.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1636]
 gi|294617336|ref|ZP_06696975.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1679]
 gi|294623134|ref|ZP_06702020.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium U0317]
 gi|314939361|ref|ZP_07846602.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133a04]
 gi|314941564|ref|ZP_07848449.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133C]
 gi|314949609|ref|ZP_07852933.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0082]
 gi|314953716|ref|ZP_07856591.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133A]
 gi|314992172|ref|ZP_07857616.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133B]
 gi|314997663|ref|ZP_07862593.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133a01]
 gi|68195482|gb|EAN09926.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium DO]
 gi|227178310|gb|EEI59282.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium TX1330]
 gi|257814581|gb|EEV43339.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,230,933]
 gi|257817864|gb|EEV45192.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,502]
 gi|257821256|gb|EEV48386.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,501]
 gi|257824265|gb|EEV51197.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,141,733]
 gi|257827372|gb|EEV53998.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,410]
 gi|257830644|gb|EEV57251.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,408]
 gi|257833466|gb|EEV59887.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com12]
 gi|257837554|gb|EEV62628.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com15]
 gi|260073267|gb|EEW61608.1| ribonucleoside-diphosphate reductase [Enterococcus faecium C68]
 gi|260076828|gb|EEW64563.1| ribonucleoside-diphosphate reductase [Enterococcus faecium TC 6]
 gi|289161202|gb|EFD09101.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium D344SRF]
 gi|291588904|gb|EFF20731.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1071]
 gi|291591871|gb|EFF23503.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1636]
 gi|291596409|gb|EFF27663.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1679]
 gi|291597503|gb|EFF28668.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium U0317]
 gi|291601845|gb|EFF32095.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
 gi|291604868|gb|EFF34344.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1162]
 gi|291609096|gb|EFF38371.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
 gi|292642797|gb|EFF60944.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium PC4.1]
 gi|313588298|gb|EFR67143.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133a01]
 gi|313593275|gb|EFR72120.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133B]
 gi|313594300|gb|EFR73145.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133A]
 gi|313599623|gb|EFR78466.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133C]
 gi|313641346|gb|EFS05926.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133a04]
 gi|313644033|gb|EFS08613.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0082]
          Length = 321

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    +  +     +L+E    E  Y  E 
Sbjct: 181 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEAEQETLKDWMYNLLYELYENEERYTEEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                +G      + ++++ AN+    +G++PLF  T    NP   M+ +       +FF
Sbjct: 241 Y--DPIGWT-EEVKTFLRYNANKALMNLGMDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|254776333|ref|ZP_05217849.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium subsp. avium ATCC 25291]
          Length = 320

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  + 
Sbjct: 182 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 242 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 296

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 297 FFSGSGSSYVIGKAVVTEDEDWD 319


>gi|118469232|ref|YP_886661.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           smegmatis str. MC2 155]
 gi|118469934|ref|YP_885432.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           smegmatis str. MC2 155]
 gi|118170519|gb|ABK71415.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           smegmatis str. MC2 155]
 gi|118171221|gb|ABK72117.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           smegmatis str. MC2 155]
          Length = 324

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  + 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDEEKKQELKDYTYELLFELYDNEVEYTQDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     ++   D     +
Sbjct: 246 Y--DSVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALAPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVNTEDEDWD 323


>gi|315605404|ref|ZP_07880447.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 180 str. F0310]
 gi|315312973|gb|EFU61047.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 180 str. F0310]
          Length = 329

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 58/141 (41%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E+      + +  + ++L+E    E  Y  + 
Sbjct: 191 TADLIRLIIRDEAVHGYYIGYKYQLAVNESSQERQDDLRDYTYSLLYELYENEEQYTEDL 250

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLKKEKN--FF 120
                +GL     ++++++ AN+    +G E LF +   N  P +   +    ++N  FF
Sbjct: 251 Y--DPLGLT-EDVKKFLRYNANKALMNLGYEALFPHDATNVNPAILAALSPNADENHDFF 307

Query: 121 ETRVTEYQQGAGL-----KWD 136
               + Y  G  +      WD
Sbjct: 308 SGSGSSYVMGEVVDTEDEDWD 328


>gi|163791218|ref|ZP_02185634.1| ribonucleotide-diphosphate [Carnobacterium sp. AT7]
 gi|159873488|gb|EDP67576.1| ribonucleotide-diphosphate [Carnobacterium sp. AT7]
          Length = 320

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 5/122 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +  +AE  + I+RDES+H  +          + P    +E +  +  +L +    E+ YA
Sbjct: 177 LPNVAEIIKLILRDESVHGTYIGYKFQIAYNQLPDNEKEEMKNWTYELLFKLYQNEVKYA 236

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKN 118
                   +G      + ++++ AN+    +G +PLF  T N      M+ +       +
Sbjct: 237 EYLY--DEIGWT-ERVKVFLRYNANKALQNLGFDPLFPDTANDVDPVIMNGISTGTSNHD 293

Query: 119 FF 120
           FF
Sbjct: 294 FF 295


>gi|296086891|emb|CBI33064.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 1  MVGIAEQYQYIMRDESLHLNFGIDVINQIK 30
          M G+    + I RDE LH +F   +    K
Sbjct: 23 MPGLTFSNELISRDEGLHCDFACLLYKNRK 52


>gi|156843271|ref|XP_001644704.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115352|gb|EDO16846.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 361

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 41/105 (39%), Gaps = 9/105 (8%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA-YA 60
            G+    + I++D  +H +F + + +++K                 ++ EA  +E+    
Sbjct: 223 PGLISGIKLILKDHIVHCDFQMSIYSELKKRLD-------PGIIERIVTEAVEIELETLE 275

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP 105
            +   K          +  ++++ +R     G +  F ++ NP+ 
Sbjct: 276 DDYFNKQLDKETKADIKNVIEYVGDRVLMGFGNQKHF-HSANPYD 319


>gi|163842202|ref|YP_001626607.1| ribonucleotide-diphosphate reductase subunit beta [Renibacterium
           salmoninarum ATCC 33209]
 gi|162955678|gb|ABY25193.1| ribonucleoside-diphosphate reductase beta chain [Renibacterium
           salmoninarum ATCC 33209]
          Length = 325

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L+E    EI Y H+ 
Sbjct: 187 TADLIRLIIRDEAVHGYYIGYKFQKGLEKVSEERREEIKAYTFDLLYELYENEIQYTHDL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VGL A   ++++ + AN+    +G E +F  T    NP     +S   D     +
Sbjct: 247 Y--DAVGL-AEDVKKFLHYNANKALMNLGYEAMFPSTVTDVNPAILSALSPNADENH--D 301

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 302 FFSGSGSSYVIGKAVNTEDEDWD 324


>gi|315149360|gb|EFT93376.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0012]
          Length = 321

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P     + +     +L+E    E  Y  E 
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEEL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                +G      + ++++ AN+    +G++PLF  T    NP   M+ +       +FF
Sbjct: 240 YDD--LGWT-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295


>gi|29375101|ref|NP_814254.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis V583]
 gi|227519132|ref|ZP_03949181.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis TX0104]
 gi|227553836|ref|ZP_03983885.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis HH22]
 gi|229547642|ref|ZP_04436367.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis TX1322]
 gi|229548395|ref|ZP_04437120.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis ATCC 29200]
 gi|255971023|ref|ZP_05421609.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T1]
 gi|255973536|ref|ZP_05424122.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T2]
 gi|256617388|ref|ZP_05474234.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis ATCC
           4200]
 gi|256761391|ref|ZP_05501971.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T3]
 gi|256852443|ref|ZP_05557819.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis T8]
 gi|256957628|ref|ZP_05561799.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis DS5]
 gi|256959663|ref|ZP_05563834.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Merz96]
 gi|256963238|ref|ZP_05567409.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
           HIP11704]
 gi|257080134|ref|ZP_05574495.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis JH1]
 gi|257080866|ref|ZP_05575227.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis E1Sol]
 gi|257083550|ref|ZP_05577911.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Fly1]
 gi|257085823|ref|ZP_05580184.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis D6]
 gi|257088966|ref|ZP_05583327.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis CH188]
 gi|257415187|ref|ZP_05592181.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
           AR01/DG]
 gi|257418242|ref|ZP_05595236.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T11]
 gi|257420749|ref|ZP_05597739.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis X98]
 gi|293384855|ref|ZP_06630698.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis R712]
 gi|293389145|ref|ZP_06633612.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis S613]
 gi|294780704|ref|ZP_06746065.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis PC1.1]
 gi|300861776|ref|ZP_07107856.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TUSoD Ef11]
 gi|307272281|ref|ZP_07553541.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0855]
 gi|307275556|ref|ZP_07556697.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX2134]
 gi|307282794|ref|ZP_07562994.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0860]
 gi|307288831|ref|ZP_07568809.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0109]
 gi|307290616|ref|ZP_07570524.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0411]
 gi|312900212|ref|ZP_07759524.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0470]
 gi|312904832|ref|ZP_07763972.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0635]
 gi|312908153|ref|ZP_07767131.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis DAPTO 512]
 gi|312952106|ref|ZP_07770987.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0102]
 gi|312979089|ref|ZP_07790804.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis DAPTO 516]
 gi|29342560|gb|AAO80325.1| ribonucleoside-diphosphate reductase 2, beta subunit [Enterococcus
           faecalis V583]
 gi|227073409|gb|EEI11372.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis TX0104]
 gi|227177089|gb|EEI58061.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis HH22]
 gi|229306611|gb|EEN72607.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis ATCC 29200]
 gi|229307134|gb|EEN73121.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis TX1322]
 gi|255962041|gb|EET94517.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T1]
 gi|255966408|gb|EET97030.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T2]
 gi|256596915|gb|EEU16091.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis ATCC
           4200]
 gi|256682642|gb|EEU22337.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T3]
 gi|256712297|gb|EEU27329.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis T8]
 gi|256948124|gb|EEU64756.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis DS5]
 gi|256950159|gb|EEU66791.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Merz96]
 gi|256953734|gb|EEU70366.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
           HIP11704]
 gi|256988164|gb|EEU75466.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis JH1]
 gi|256988896|gb|EEU76198.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis E1Sol]
 gi|256991580|gb|EEU78882.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Fly1]
 gi|256993853|gb|EEU81155.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis D6]
 gi|256997778|gb|EEU84298.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis CH188]
 gi|257157015|gb|EEU86975.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
           ARO1/DG]
 gi|257160070|gb|EEU90030.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T11]
 gi|257162573|gb|EEU92533.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis X98]
 gi|291077859|gb|EFE15223.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis R712]
 gi|291081516|gb|EFE18479.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis S613]
 gi|294452314|gb|EFG20755.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis PC1.1]
 gi|295114163|emb|CBL32800.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Enterococcus sp. 7L76]
 gi|300848301|gb|EFK76058.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TUSoD Ef11]
 gi|306498330|gb|EFM67839.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0411]
 gi|306500300|gb|EFM69639.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0109]
 gi|306503650|gb|EFM72881.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0860]
 gi|306507661|gb|EFM76790.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX2134]
 gi|306511170|gb|EFM80180.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0855]
 gi|310625861|gb|EFQ09144.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis DAPTO 512]
 gi|310629888|gb|EFQ13171.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0102]
 gi|310631838|gb|EFQ15121.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0635]
 gi|311288123|gb|EFQ66679.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis DAPTO 516]
 gi|311292573|gb|EFQ71129.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0470]
 gi|315026267|gb|EFT38199.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX2137]
 gi|315028520|gb|EFT40452.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4000]
 gi|315032246|gb|EFT44178.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0017]
 gi|315035532|gb|EFT47464.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0027]
 gi|315143982|gb|EFT87998.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX2141]
 gi|315146930|gb|EFT90946.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4244]
 gi|315155004|gb|EFT99020.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0043]
 gi|315158779|gb|EFU02796.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0312]
 gi|315161036|gb|EFU05053.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0645]
 gi|315166222|gb|EFU10239.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX1302]
 gi|315167729|gb|EFU11746.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX1341]
 gi|315170811|gb|EFU14828.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX1342]
 gi|315173869|gb|EFU17886.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX1346]
 gi|315574921|gb|EFU87112.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0309B]
 gi|315576500|gb|EFU88691.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0630]
 gi|315582368|gb|EFU94559.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0309A]
 gi|327534208|gb|AEA93042.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis OG1RF]
          Length = 321

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P     + +     +L+E    E  Y  E 
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEEL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                +G      + ++++ AN+    +G++PLF  T    NP   M+ +       +FF
Sbjct: 240 YDD--LGWT-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295


>gi|257865182|ref|ZP_05644835.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC30]
 gi|257871507|ref|ZP_05651160.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC10]
 gi|257874804|ref|ZP_05654457.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC20]
 gi|325571550|ref|ZP_08147050.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           casseliflavus ATCC 12755]
 gi|257799116|gb|EEV28168.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC30]
 gi|257805671|gb|EEV34493.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC10]
 gi|257808970|gb|EEV37790.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC20]
 gi|325156026|gb|EGC68222.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           casseliflavus ATCC 12755]
          Length = 321

 Score = 62.3 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ +     +L+E    E  Y  E 
Sbjct: 181 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQQKLKDWMYDLLYELYENEERYTEEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                +G      + ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 241 Y--DEIGWT-EEVKTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|319645694|ref|ZP_07999925.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
           BT1B_CT2]
 gi|317392241|gb|EFV73037.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
           BT1B_CT2]
          Length = 330

 Score = 61.9 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 9/136 (6%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
            E    I+RDE++H  +   +  +I  +         +  + +++ E    EIAY  E  
Sbjct: 191 GEIINLIIRDEAIHGVYVGLLAQEIYNKKDEGTQHRLEMFALSLIEELYRNEIAYTEELY 250

Query: 65  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFET 122
               VGL     ++++++  N+    +G  P F+  E NP   +   ++ K +  +FF  
Sbjct: 251 --DQVGLT-HDVKKFIRYNGNKALSNLGFNPYFEEEEINPI--VLNGLNTKTKSHDFFSM 305

Query: 123 RVTEYQQGAG--LKWD 136
           +   Y++     LK D
Sbjct: 306 KGNGYKKATVEPLKDD 321


>gi|315153942|gb|EFT97958.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0031]
          Length = 321

 Score = 61.9 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P     + +     +L+E    E  Y  E 
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEEL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                +G      + ++++ AN+    +G++PLF  T    NP   M+ +       +FF
Sbjct: 240 YDD--LGWT-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295


>gi|307268568|ref|ZP_07549940.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4248]
 gi|306515057|gb|EFM83600.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4248]
          Length = 321

 Score = 61.9 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P     + +     +L+E    E  Y  E 
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEERYTEEL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                +G      + ++++ AN+    +G++PLF  T    NP   M+ +       +FF
Sbjct: 240 YDD--LGWT-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295


>gi|41409193|ref|NP_962029.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium subsp. paratuberculosis K-10]
 gi|41398013|gb|AAS05643.1| NrdG [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 324

 Score = 61.9 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  + 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 246 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVVTEDEDWD 323


>gi|118465359|ref|YP_883075.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium 104]
 gi|118166646|gb|ABK67543.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           avium 104]
          Length = 324

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  + 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 246 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVVTEDEDWD 323


>gi|225021562|ref|ZP_03710754.1| hypothetical protein CORMATOL_01583 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945553|gb|EEG26762.1| hypothetical protein CORMATOL_01583 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 330

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   +      +E ++ +  +L+E    EIAY  + 
Sbjct: 192 TADIIRLIIRDEAVHGYYIGYKFQQALAKESPARQEELKEYTFDVLYELYENEIAYTEDL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 252 Y--DPLGWT-EDVKRFLRYNANKALNNLGYEALFPADE 286


>gi|319408170|emb|CBI81823.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           schoenbuchensis R1]
          Length = 324

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 12/140 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +      +E +  +  ML +   +E  Y  + 
Sbjct: 186 TADLIRLIIRDEAVHGYYVGYKFQLGFAKLDEAKKQEIKDFAFNMLFDLYSIECKYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                +GL     + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 246 Y--DAIGLT-EDVKVFIHYNANKALMNLGFEPLFPPEVCRVNPA--ILAALSPNSDENHD 300

Query: 119 FFETRVTEYQ--QGAGLKWD 136
           FF    + Y   +      D
Sbjct: 301 FFSGSGSSYVIGKAVATTDD 320


>gi|305681191|ref|ZP_07403998.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           matruchotii ATCC 14266]
 gi|305659396|gb|EFM48896.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           matruchotii ATCC 14266]
          Length = 330

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   +      +E ++ +  +L+E    EIAY  + 
Sbjct: 192 TADIIRLIIRDEAVHGYYIGYKFQQALAKESPARQEELKEYTFDVLYELYENEIAYTEDL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 252 Y--DPLGWT-EDVKRFLRYNANKALNNLGYEALFPADE 286


>gi|37525251|ref|NP_928595.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784678|emb|CAE13578.1| ribonucleoside-diphosphate reductase 2 beta chain (ribonucleotide
           reductase 2) (R2f protein) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 319

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 57/134 (42%), Gaps = 6/134 (4%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   ++  L  KE ++ + ++L E    EI Y  E 
Sbjct: 181 TADLIRLIIRDEAIHGYYIGYKFQQSLKKHSTLEQKEIKEFTFSLLLELYENEIKYTEEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFF 120
                VG      ++++ + AN+    +G E LF     N  P +   +  +  +  +FF
Sbjct: 241 Y--DIVGWT-EDIKKFLHYNANKALMNLGYETLFPPEITNVSPTILSALSPNANENHDFF 297

Query: 121 ETRVTEYQQGAGLK 134
               + Y  G  + 
Sbjct: 298 SGSGSSYVIGKAVN 311


>gi|312883652|ref|ZP_07743377.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368875|gb|EFP96402.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 323

 Score = 61.9 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E      ++ + K+ ++L     +E  Y    
Sbjct: 185 TADLIRLIIRDEAIHGYYIGYKFQLGYQELDEARQEQLKDKAYSLLLSLYDIECQYTESL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKN 118
                VGL     + ++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 245 Y--DQVGLT-EDVKHFLHYNANKALMNLGFEALFPQELCNVNPAIMAALSPNSDENH--D 299

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 300 FFSGSGSSYVIGKAVVTEDEDWD 322


>gi|320095222|ref|ZP_08026924.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 178 str. F0338]
 gi|319977850|gb|EFW09491.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 178 str. F0338]
          Length = 319

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E+      + +  + ++L+E    E  Y  + 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQLAVGESTQERRDDLKDYTYSLLYELYENEEQYTEDL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
                +GL     ++++++ AN+    +G E LF +     NP   +   +    ++N  
Sbjct: 241 Y--DPLGLT-EDVKKFLRYNANKALMNLGYEALFPHDATDVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 296 FFSGSGSSYVMGEVVDTEDEDWD 318


>gi|313884792|ref|ZP_07818546.1| ribonucleoside-diphosphate reductase, beta subunit [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619991|gb|EFR31426.1| ribonucleoside-diphosphate reductase, beta subunit [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 363

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 7/123 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +  +AE  + I+RDES+H  +                 +E +Q    +  E    E  Y 
Sbjct: 178 LPNVAEIIKLILRDESVHGTYIGYKFQLGYNALSETDQEELKQWVFNLCFELYSNEEKYT 237

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
                   +G        ++++ AN+    +G +PLF  T    NP   M+ +       
Sbjct: 238 SYIY--DELGWT-EEVNTFVRYNANKALQNLGFDPLFADTAEDVNPIV-MNGISTGTSNH 293

Query: 118 NFF 120
           +FF
Sbjct: 294 DFF 296


>gi|156096873|ref|XP_001614470.1| ribonucleotide reductase small subunit [Plasmodium vivax SaI-1]
 gi|148803344|gb|EDL44743.1| ribonucleotide reductase small subunit, putative [Plasmodium vivax]
          Length = 335

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE LH +F +   N       HL  K   +        A  LE  ++ E +    + 
Sbjct: 213 IHRDEYLHGDFSVMCCN-------HLNNKLKYESLLDYFKMAVELEYQFSMEMLELSVLK 265

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 106
           +     + +++++A+     +     F  ++ PF W
Sbjct: 266 IKKEQVKSFLEYLADTMLVNLKHPKYFN-SKYPFTW 300


>gi|219681363|ref|YP_002456127.1| putative ribonucleoside diphosphate reductase beta chain [Erwinia
           phage phiEa21-4]
 gi|327198492|ref|YP_004327080.1| ribonucleoside diphosphate reductase beta chain [Erwinia phage
           phiEa104]
 gi|199580630|gb|ACH89017.1| putative ribonucleoside diphosphate reductase beta chain [Erwinia
           phage phiEa21-4]
 gi|311875188|emb|CBX44448.1| ribonucleoside diphosphate reductase beta chain [Erwinia phage
           phiEa104]
          Length = 365

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 11/142 (7%)

Query: 3   GIAEQYQYIMRDESLH--LNFGIDVINQIKIENPHLWT--KEFQQKSRTMLHEATLLEIA 58
           G+A+  Q IM DE LH  ++F       I +++P  +   +  +   + +L E    E  
Sbjct: 218 GVAQLVQKIMLDEILHSKMDFAAL---DILLKDPVWFQSYQNCKGDVQRILDEVMENESN 274

Query: 59  YAHETM--PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKK 115
           +A       +  VGLN    ++++ + A      + L+  +    +NP P+M + +++  
Sbjct: 275 WADYIFSEGRSVVGLNPTLLKEWVYYSAKPLYDFLNLDYNYPVVVKNPLPYMDKWMNIDS 334

Query: 116 EKNF-FETRVTEYQQGAGLKWD 136
           ++N   E   ++Y     +  D
Sbjct: 335 QQNANQEQDNSQYLLNTMVNDD 356


>gi|257870055|ref|ZP_05649708.1| ribonucleoside-diphosphate reductase [Enterococcus gallinarum EG2]
 gi|257804219|gb|EEV33041.1| ribonucleoside-diphosphate reductase [Enterococcus gallinarum EG2]
          Length = 322

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    +  +     +L+E    E  Y  E 
Sbjct: 181 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQQRLKDWMYDLLYELYENEERYTEEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                +G      + ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 241 Y--DAIGWT-EEVKTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|293193572|ref|ZP_06609842.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           odontolyticus F0309]
 gi|292819928|gb|EFF78930.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           odontolyticus F0309]
          Length = 320

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E+      + +  + ++L+E    E  Y  + 
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKYQLAVNESSQERQDDLRDYTYSLLYELYENEEQYTEDL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
                +GL     ++++++ AN+    +G E LF       NP   +   +    ++N  
Sbjct: 242 Y--DPLGLT-EDVKKFLRYNANKALMNLGYEALFPADATDVNPA--ILAALSPNADENHD 296

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 297 FFSGSGSSYVMGEVVDTEDEDWD 319


>gi|317495971|ref|ZP_07954333.1| ribonucleotide reductase [Gemella moribillum M424]
 gi|316913875|gb|EFV35359.1| ribonucleotide reductase [Gemella moribillum M424]
          Length = 322

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 55/137 (40%), Gaps = 15/137 (10%)

Query: 4   IAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
             E  + I+ DE++H +F      ++   +  E      KE      T+L +    E+ Y
Sbjct: 185 SGEIIRKILLDETIHGSFTGFDAQEIFKTLTPEEQEKANKEM----YTLLLDLYENELKY 240

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK- 117
             +   +  +GL     + Y+++ ANR    +G    F+  E NP   +   ++   +  
Sbjct: 241 TKDIYGE--IGL-FEEVKDYVEYNANRALANLGYPGYFEDKEINPI--IENAMNTSTKNH 295

Query: 118 NFFETRVTEYQQGAGLK 134
           +FF  +   Y     ++
Sbjct: 296 DFFSVKGDGYVVSMNVE 312


>gi|47213107|emb|CAF89527.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 369

 Score = 61.6 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 100 TENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGL 133
            ENPF +M E I L+ + NFFE RV EYQ+   +
Sbjct: 323 AENPFDFM-ENISLEGKTNFFEKRVGEYQRMGVM 355


>gi|329767978|ref|ZP_08259489.1| ribonucleoside-diphosphate reductase [Gemella haemolysans M341]
 gi|328838463|gb|EGF88071.1| ribonucleoside-diphosphate reductase [Gemella haemolysans M341]
          Length = 322

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 15/137 (10%)

Query: 4   IAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
             E  + I+ DE++H +F      ++   +  E      KE       +L +    E+ Y
Sbjct: 185 SGEIIRKILLDETIHGSFTGFDAQELFKTLTPEEQERAEKEM----YKLLLDLYENELKY 240

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK- 117
             +      +GL     + Y+++ ANR    +G    F+  E NP   +   ++   +  
Sbjct: 241 TKDIY--DEIGL-YEDVKDYVEYNANRALANLGYPGYFEDKEINPI--IENAMNTNTKNH 295

Query: 118 NFFETRVTEYQQGAGLK 134
           +FF  +   Y     ++
Sbjct: 296 DFFSVKGDGYVVSMNVE 312


>gi|219883069|ref|YP_002478233.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
           A6]
 gi|219862075|gb|ACL42416.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
           A6]
          Length = 326

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 6/132 (4%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I++DE++H  +      +   +      +E Q  +  +L E    E+ Y H+ 
Sbjct: 186 TADLIRLIIKDEAVHGYYIGYKFQRGLEKETAERREELQAYAYELLDELYENEVQYTHDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKN--FF 120
                VGL A   ++++ + AN+    +GL+P+F +   N  P +   +    ++N  FF
Sbjct: 246 Y--DGVGL-AEDVKKFLHYNANKALMNLGLDPVFAQDATNVNPAILSALSPNADENHDFF 302

Query: 121 ETRVTEYQQGAG 132
               + Y  G+ 
Sbjct: 303 SGSGSSYIVGSS 314


>gi|326772780|ref|ZP_08232064.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           viscosus C505]
 gi|326637412|gb|EGE38314.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           viscosus C505]
          Length = 325

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E+     +E +  +  +L E    E  Y  + 
Sbjct: 187 TADLIRLIIRDEAVHGYYIGYKYQLAVRESSPERQQELKDYTFDLLMELYDNEEQYTEDL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                +GL     ++++++ AN+    +G E LF       NP     +S   D     +
Sbjct: 247 Y--DELGLT-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--D 301

Query: 119 FFETRVTEYQQGAG-----LKWD 136
           FF    + Y  G         WD
Sbjct: 302 FFSGSGSSYVMGTAEATQDEDWD 324


>gi|50404173|gb|AAT76849.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
          Length = 324

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 8/96 (8%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE LH +F +   N       HL  K   +        A  LE  ++ E +    + 
Sbjct: 202 IHRDEYLHGDFSVMCCN-------HLVNKLKYEHVLDYFKMAVDLEYQFSLEMLELNVLK 254

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 106
           +       +++++ +     +     +  ++ PF W
Sbjct: 255 IKKEQVRAFLEYLTDTMLTNLKYPKHYN-SKYPFSW 289


>gi|258597037|ref|XP_001347439.2| ribonucleotide reductase small subunit, putative [Plasmodium
           falciparum 3D7]
 gi|254922415|gb|AAN35352.2| ribonucleotide reductase small subunit, putative [Plasmodium
           falciparum 3D7]
          Length = 335

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 8/96 (8%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE LH +F +   N       HL  K   +        A  LE  ++ E +    + 
Sbjct: 213 IHRDEYLHGDFSVMCCN-------HLVNKLKYEHVLDYFKMAVDLEYQFSLEMLELNVLK 265

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 106
           +       +++++ +     +     +  ++ PF W
Sbjct: 266 IKKEQVRAFLEYLTDTMLTNLKYPKHYN-SKYPFSW 300


>gi|325066257|ref|ZP_08124930.1| Ribonucleoside-diphosphate reductase [Actinomyces oris K20]
          Length = 324

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E+      E +  +  +L E    E  Y  + 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKYQLAVRESSPERQAELKDYTFELLMELYDNEEQYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                +GL     ++++++ AN+    +G E LF       NP     +S   D     +
Sbjct: 246 Y--DELGLT-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--D 300

Query: 119 FFETRVTEYQQGAG-----LKWD 136
           FF    + Y  G         WD
Sbjct: 301 FFSGSGSSYVMGTAEATQDEDWD 323


>gi|320531976|ref|ZP_08032874.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 171 str. F0337]
 gi|320135808|gb|EFW27858.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 171 str. F0337]
          Length = 324

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E+     +E +  +  +L E    E  Y  + 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKYQLAVRESSPERQQELKDYTFELLMELYDNEEQYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                +GL     ++++++ AN+    +G E LF       NP     +S   D     +
Sbjct: 246 Y--DELGLT-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--D 300

Query: 119 FFETRVTEYQQGAG-----LKWD 136
           FF    + Y  G         WD
Sbjct: 301 FFSGSGSSYVMGTAEATQDEDWD 323


>gi|310816082|ref|YP_003964046.1| ribonucleoside-diphosphate reductase, beta subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308754817|gb|ADO42746.1| ribonucleoside-diphosphate reductase, beta subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 317

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 6/130 (4%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I++DE++H  +            P    +E +  +  +L +   +E +YA + 
Sbjct: 179 TADLIRLIIKDEAVHGYYIGYKFQLGYALLPEAEKEELKGFAYDLLLQLYEIECSYAADL 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFF 120
                +GL     +Q++ + AN+    +G +P+F       NP    +   D  +  +FF
Sbjct: 239 Y--DGIGLT-EDVKQFLHYNANKSLMNLGFDPIFPDEITNFNPAVLAALAPDANENHDFF 295

Query: 121 ETRVTEYQQG 130
               + Y  G
Sbjct: 296 SGSGSSYVIG 305


>gi|329945141|ref|ZP_08293009.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 170 str. F0386]
 gi|328529340|gb|EGF56255.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 170 str. F0386]
          Length = 324

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E+      E +  +  +L E    E  Y  + 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKYQLAVRESSPERQAELKDYTFELLMELYDNEEQYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                +GL     ++++++ AN+    +G E LF       NP     +S   D     +
Sbjct: 246 Y--DELGLT-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--D 300

Query: 119 FFETRVTEYQQGAG-----LKWD 136
           FF    + Y  G         WD
Sbjct: 301 FFSGSGSSYVMGTAEATQDEDWD 323


>gi|323479608|gb|ADX79047.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis 62]
          Length = 321

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P     + +     +L+E    E  Y  E 
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQDKLKDWMYNLLYELYENEEHYTEEL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                +G      + ++++ AN+    +G++PLF  T    NP   M+ +       +FF
Sbjct: 240 YDD--LGWT-EEVKTFLRYNANKALMNLGMDPLFADTANDVNPIV-MNGISTGTSNHDFF 295


>gi|221055321|ref|XP_002258799.1| Ribonucleotide reductase small subunit [Plasmodium knowlesi strain
           H]
 gi|193808869|emb|CAQ39572.1| Ribonucleotide reductase small subunit,putative [Plasmodium
           knowlesi strain H]
          Length = 335

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 8/96 (8%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE LH +F +   N       HL  K   ++       A  LE  +A E +    + 
Sbjct: 213 IHRDEYLHGDFSVMCCN-------HLNNKLKYERLLDYFKMAVKLEYQFAIEMLDLSVLK 265

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 106
           +     + +++++A+     +     F  ++ PF W
Sbjct: 266 IKKEQVKSFLEYLADTMLVNLKHPKYFN-SKYPFTW 300


>gi|70946075|ref|XP_742789.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
           chabaudi]
 gi|56521965|emb|CAH76799.1| ribonucleotide reductase small subunit, putative [Plasmodium
           chabaudi chabaudi]
          Length = 211

 Score = 60.8 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 10/110 (9%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE L  +F +   N       HL  K   +        A  LE  +  E +    + 
Sbjct: 89  IQRDEYLQGDFSVMCCN-------HLNNKLKYENVLDYFKTAVDLEYNFCVEMLDFDSLK 141

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW--MSEVIDLKKEKN 118
           +     +Q++Q++A+     +     +  ++ PF W   S++I  +  KN
Sbjct: 142 ITKDQVKQFLQYLADTMLVNLKYSKHYN-SKYPFTWKEFSKIIVSENAKN 190


>gi|325675841|ref|ZP_08155525.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
 gi|325553812|gb|EGD23490.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
          Length = 335

 Score = 60.4 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  + 
Sbjct: 197 TADVIRLIIRDEAVHGYYIGYKYQRGLERVTEAEREELKNYTFELLFELYDNEVEYTQDL 256

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 257 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--D 311

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 312 FFSGSGSSYVIGKAVNTEDDDWD 334


>gi|226305840|ref|YP_002765800.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus
           erythropolis PR4]
 gi|229493405|ref|ZP_04387194.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
           erythropolis SK121]
 gi|226184957|dbj|BAH33061.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus
           erythropolis PR4]
 gi|229319721|gb|EEN85553.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
           erythropolis SK121]
          Length = 321

 Score = 60.4 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  + 
Sbjct: 183 TADLIRLIIRDEAVHGYYIGYKYQKGLEQLTEAEREELKNYTFELLFELYENEVDYTQDL 242

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+  + +G E LF   E   NP     +S   D     +
Sbjct: 243 Y--DGVGLT-EDVKKFLRYNANKALNNLGYEGLFPKDETDVNPAILSALSPNADENH--D 297

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 298 FFSGSGSSYVIGKAVNTEDDDWD 320


>gi|99080359|ref|YP_612513.1| ribonucleotide-diphosphate reductase subunit beta [Ruegeria sp.
           TM1040]
 gi|99036639|gb|ABF63251.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Ruegeria sp. TM1040]
          Length = 338

 Score = 60.4 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 10/139 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          KE +  +  +L +   +E  Y  E 
Sbjct: 200 TADLIRLIIRDEAIHGYYIGYKFQRGLERASEAERKELKDFAFGLLFDLYDIEARY-TEQ 258

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NF 119
           +  G +GL     + ++ + AN+    +G E LF       NP   M+ +     E  +F
Sbjct: 259 LYDG-LGLT-EDVKNFLHYNANKALQNLGFEALFPEETCRVNPAI-MAALSPGSDENHDF 315

Query: 120 FETRVTEYQ--QGAGLKWD 136
           F    + Y   +    + D
Sbjct: 316 FSGSGSSYVIGKAVATEDD 334


>gi|296128314|ref|YP_003635564.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM
           20109]
 gi|296020129|gb|ADG73365.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM
           20109]
          Length = 326

 Score = 60.4 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  +L E    E+ Y  + 
Sbjct: 188 TADLIRLIIRDEAVHGYYIGYKFQKGLERVSEAERAELKDYTFNLLFELYDNEVEYTQDL 247

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
                +GL     ++++++ AN+    +G E LF   E   NP   +   +    ++N  
Sbjct: 248 Y--DELGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNPA--ILAALSPNADENHD 302

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 303 FFSGSGSSYVIGKAVNTEDDDWD 325


>gi|312140539|ref|YP_004007875.1| ribonucleoside-diphosphate reductase nrdf [Rhodococcus equi 103S]
 gi|311889878|emb|CBH49195.1| ribonucleoside-diphosphate reductase NrdF [Rhodococcus equi 103S]
          Length = 329

 Score = 60.4 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  + 
Sbjct: 191 TADVIRLIIRDEAVHGYYIGYKYQRGLERVTEAEREELKNYTFELLFELYDNEVEYTQDL 250

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 251 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--D 305

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 306 FFSGSGSSYVIGKAVNTEDDDWD 328


>gi|308177564|ref|YP_003916970.1| ribonucleoside-diphosphate reductase subunit beta [Arthrobacter
           arilaitensis Re117]
 gi|307745027|emb|CBT75999.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter
           arilaitensis Re117]
          Length = 324

 Score = 60.4 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +++E    E+ Y H+ 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQKGLENETEERKQELKDYTFELMYELYENEVQYTHDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FF 120
                VGL+    ++++ + AN+    +G E +F  T  +  P +   +    ++N  FF
Sbjct: 246 Y--DPVGLS-EDVKKFLHYNANKALMNLGYEAMFPSTVTDVSPAILAALSPNADENHDFF 302

Query: 121 ETRVTEYQQGAGL-----KWD 136
               + Y  G  +      WD
Sbjct: 303 SGSGSSYVIGKAVNTEDEDWD 323


>gi|269957220|ref|YP_003327009.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269305901|gb|ACZ31451.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 326

 Score = 60.0 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  +L E    E+ Y    
Sbjct: 188 TADLIRLIIRDEAVHGYYIGYKFQKGLALESQERQDEIKAYTFELLFELYENEVEYTEAL 247

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
             +  +GL     ++++++ AN+    +G E LF   E   NP   +   +    ++N  
Sbjct: 248 YGE--LGLT-EDVKKFLRYNANKALMNLGYEALFPKEETDVNPA--ILAALSPNADENHD 302

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 303 FFSGSGSSYVIGKAVDTTDDDWD 325


>gi|304445906|pdb|3MJO|A Chain A, Small Subunit (R2f) Of Native Ribonucleotide Reductase
           From Corynebacterium Ammoniagenes
 gi|304445907|pdb|3MJO|B Chain B, Small Subunit (R2f) Of Native Ribonucleotide Reductase
           From Corynebacterium Ammoniagenes
          Length = 296

 Score = 60.0 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 45/98 (45%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDES+H  +      Q   +      +E++  +  ++++    EI Y  + 
Sbjct: 190 TADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDI 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 250 YDD--LGWT-EDVKRFLRYNANKALNNLGYEGLFPTDE 284


>gi|159184148|ref|NP_353105.2| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
           tumefaciens str. C58]
 gi|159139483|gb|AAK85890.2| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium
           tumefaciens str. C58]
          Length = 324

 Score = 60.0 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y  + 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQRALDRLGEAQRQEIKDFAFDLLLELYDNEAKYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     +Q++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 246 Y--DGVGLT-EDVKQFLHYNANKALMNLGYEALFPAEACRVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVATEDEDWD 323


>gi|209551073|ref|YP_002282990.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209536829|gb|ACI56764.1| Ribonucleoside-diphosphate reductase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 324

 Score = 60.0 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y  E 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQRGLERLSEERKQEIKDFAFDLLLELYDNEARY-TEA 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 245 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVATEDEDWD 323


>gi|3068719|gb|AAC14561.1| ribonucleoside diphosphate reductase small subunit [Corynebacterium
           ammoniagenes]
          Length = 329

 Score = 60.0 bits (145), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 45/98 (45%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDES+H  +      Q   +      +E++  +  ++++    EI Y  + 
Sbjct: 191 TADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDI 250

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 251 YDD--LGWT-EDVKRFLRYNANKALNNLGYEGLFPTDE 285


>gi|18158911|pdb|1KGN|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
           Containing, Form
 gi|18158912|pdb|1KGN|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
           Containing, Form
 gi|18158913|pdb|1KGN|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
           Containing, Form
 gi|18158914|pdb|1KGN|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
           Containing, Form
 gi|18158915|pdb|1KGO|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
           Containing, Form
 gi|18158916|pdb|1KGO|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
           Containing, Form
 gi|18158917|pdb|1KGO|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
           Containing, Form
 gi|18158918|pdb|1KGO|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
           Containing, Form
 gi|18158919|pdb|1KGP|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Mn
           Substituted Form
 gi|18158920|pdb|1KGP|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Mn
           Substituted Form
 gi|18158921|pdb|1KGP|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Mn
           Substituted Form
 gi|18158922|pdb|1KGP|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Mn
           Substituted Form
 gi|48425146|pdb|1OQU|A Chain A, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
           Soaking Of Crystals Of The Ribonucleotide Reductase R2f
           Protein From Corynebacterium Ammoniagenes
 gi|48425147|pdb|1OQU|B Chain B, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
           Soaking Of Crystals Of The Ribonucleotide Reductase R2f
           Protein From Corynebacterium Ammoniagenes
 gi|48425148|pdb|1OQU|C Chain C, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
           Soaking Of Crystals Of The Ribonucleotide Reductase R2f
           Protein From Corynebacterium Ammoniagenes
 gi|48425149|pdb|1OQU|D Chain D, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
           Soaking Of Crystals Of The Ribonucleotide Reductase R2f
           Protein From Corynebacterium Ammoniagenes
 gi|193506844|pdb|3DHZ|A Chain A, Apo (Iron Free) Structure Of C. Ammoniagenes R2 Protein
 gi|193506845|pdb|3DHZ|B Chain B, Apo (Iron Free) Structure Of C. Ammoniagenes R2 Protein
 gi|3077614|emb|CAA70766.1| ribonucleotide reductase subunit R2F [Corynebacterium ammoniagenes]
          Length = 329

 Score = 60.0 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 45/98 (45%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDES+H  +      Q   +      +E++  +  ++++    EI Y  + 
Sbjct: 191 TADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDI 250

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 251 YDD--LGWT-EDVKRFLRYNANKALNNLGYEGLFPTDE 285


>gi|319944853|ref|ZP_08019115.1| ribonucleotide-diphosphate reductase subunit beta [Lautropia
           mirabilis ATCC 51599]
 gi|319741423|gb|EFV93848.1| ribonucleotide-diphosphate reductase subunit beta [Lautropia
           mirabilis ATCC 51599]
          Length = 333

 Score = 60.0 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 14/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +     P       +  + ++L E   +E  Y  E 
Sbjct: 196 TADLIRLIIRDEAVHGYYIGYKFQRALARLPEADQARLKDFAFSLLFELYEVEALYTEEL 255

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NF 119
             +  +GL     + ++ + AN+    +G E LF       NP   +   +    E  +F
Sbjct: 256 YDR--IGLT-EDVKAFLHYNANKALQNLGYEALFPPAACEVNPA--ILSALSPDSENHDF 310

Query: 120 FETRVTEYQQGAGL-----KWD 136
           F    + Y  G  +      WD
Sbjct: 311 FSGSGSSYVIGKAVATEDEDWD 332


>gi|229818600|ref|YP_002880126.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM
           12333]
 gi|229564513|gb|ACQ78364.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM
           12333]
          Length = 326

 Score = 60.0 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  + 
Sbjct: 188 TADLIRLIIRDEAVHGYYIGYKFQRGLEALAPEQREEIKSYTYELLFELYENEVQYTEDL 247

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
                VGL     ++++++ AN+    +G E LF   E   NP   +   +    ++N  
Sbjct: 248 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPKDETDVNPA--ILAALSPNADENHD 302

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 303 FFSGSGSSYVIGKAVNTEDDDWD 325


>gi|227496669|ref|ZP_03926945.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           urogenitalis DSM 15434]
 gi|226833817|gb|EEH66200.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           urogenitalis DSM 15434]
          Length = 324

 Score = 60.0 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E+      E +  +  +L E    E  Y  + 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKYQLAVRESSPQRQAELKDYTFDLLMELYDNEEQYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                +GL     ++++++ AN+    +G E LF       NP     +S   D     +
Sbjct: 246 Y--DELGLT-EDVKKFLRYNANKALMNLGYEALFPADAVDVNPAILASLSPNADENH--D 300

Query: 119 FFETRVTEYQQGAG-----LKWD 136
           FF    + Y  G         WD
Sbjct: 301 FFSGSGSSYVIGTAEATEDEDWD 323


>gi|325291517|ref|YP_004277381.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
           sp. H13-3]
 gi|325059370|gb|ADY63061.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
           sp. H13-3]
          Length = 324

 Score = 60.0 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y  + 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQRALERLGEAEKQEIKDFAFDLLLELYDNEAKYTQDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     +Q++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 246 Y--DGVGLT-EDVKQFLHYNANKALMNLGYEALFPPEACRVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVATEDEDWD 323


>gi|254489413|ref|ZP_05102616.1| ribonucleoside-diphosphate reductase, beta subunit [Roseobacter sp.
           GAI101]
 gi|214041920|gb|EEB82560.1| ribonucleoside-diphosphate reductase, beta subunit [Roseobacter sp.
           GAI101]
          Length = 324

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 54/142 (38%), Gaps = 14/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   + P       +  + +++ +   +E  Y  E 
Sbjct: 187 TADLIRLIIRDEAIHGYYIGYKFQRATEQLPQADRDALKDFAFSLMFDLYEIEAHYTAEL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEK-NF 119
                +GL     + ++ + AN+    +G E LF       NP   +   +    E  +F
Sbjct: 247 YDD--LGLT-EDVKAFLHYNANKALQNLGYEALFPAQVCEVNPA--ILAALSPDSENHDF 301

Query: 120 FETRVTEYQQGAGL-----KWD 136
           F    + Y  G  +      WD
Sbjct: 302 FSGSGSSYVIGKAVATEDEDWD 323


>gi|194015457|ref|ZP_03054073.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           pumilus ATCC 7061]
 gi|194012861|gb|EDW22427.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           pumilus ATCC 7061]
          Length = 329

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 7/134 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+   E    I+RDE++H  +   +  +I          +  + S  +L E    E+AY 
Sbjct: 189 MMQSGEIINLIIRDEAIHGVYVGLLAQEIYNRQTDDVRADLHEWSLGLLTELYENEVAYT 248

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEK-N 118
            +    G VGL A   + ++++ AN+    +G +  F     NP   +   +  K +  +
Sbjct: 249 DDVY--GAVGL-AHDVKAFVRYNANKALMNLGFDAHFPDELVNPI--VINGLSTKTKAHD 303

Query: 119 FFETRVTEYQQGAG 132
           FF  +   Y++   
Sbjct: 304 FFSMQGNGYKKATV 317


>gi|147800139|emb|CAN68817.1| hypothetical protein VITISV_036653 [Vitis vinifera]
          Length = 924

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 74  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGL 133
               +Y  +  +     +  E  +   ENPF WM E I L+   NFF+ R+ +YQ+ + +
Sbjct: 731 EDLYKYQSYKWDX-TVALXYERKYN-VENPFDWM-EFISLQGNANFFQRRMGDYQKASIM 787

Query: 134 K 134
            
Sbjct: 788 S 788


>gi|239636654|ref|ZP_04677656.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           warneri L37603]
 gi|239598009|gb|EEQ80504.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           warneri L37603]
 gi|330683860|gb|EGG95634.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU121]
          Length = 324

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      +   Q+   +L E    E++Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSESEKQRADQEMYKLLKELYDNEVSYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           H       +GL A     Y+++  N+    +G EP F+  E NP   +   +D   +  +
Sbjct: 241 HLLYDD--IGL-AEDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|218663032|ref|ZP_03518962.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli
           IE4771]
          Length = 324

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y  E 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQRGLERLSEERRQEIKDFAFDLLLELYDNEARY-TEA 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 245 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVATEDEDWD 323


>gi|323354474|gb|EGA86313.1| Rnr2p [Saccharomyces cerevisiae VL3]
          Length = 306

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE 32
           M G+    + I RDE LH +F   +   +K +
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLFAHLKNK 290


>gi|294669616|ref|ZP_06734683.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308529|gb|EFE49772.1| hypothetical protein NEIELOOT_01517 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 81

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 68  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY-TENPFPWMSEVID 112
            +GLN     QY+++I N R   +GL   F+  T+NP PW++  + 
Sbjct: 1   MIGLNKEILAQYVEYITNLRMQAVGLPAGFEGATQNPIPWINAWLS 46


>gi|323333040|gb|EGA74442.1| Rnr2p [Saccharomyces cerevisiae AWRI796]
          Length = 306

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE 32
           M G+    + I RDE LH +F   +   +K +
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLLFAHLKNK 290


>gi|51247866|pdb|1UZR|A Chain A, Crystal Structure Of The Class Ib Ribonucleotide Reductase
           R2f-2 Subunit From Mycobacterium Tuberculosis
 gi|51247867|pdb|1UZR|B Chain B, Crystal Structure Of The Class Ib Ribonucleotide Reductase
           R2f-2 Subunit From Mycobacterium Tuberculosis
 gi|51247868|pdb|1UZR|C Chain C, Crystal Structure Of The Class Ib Ribonucleotide Reductase
           R2f-2 Subunit From Mycobacterium Tuberculosis
          Length = 296

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +       +   E +  +  +L E    E+ Y  + 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQRGLALVDDVTRAELKDYTYELLFELYDNEVEYTQDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 103
                VGL     ++++++ AN+    +G E LF   E   NP
Sbjct: 246 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEALFPRDETDVNP 285


>gi|283457964|ref|YP_003362570.1| ribonucleotide reductase subunit beta [Rothia mucilaginosa DY-18]
 gi|283133985|dbj|BAI64750.1| ribonucleotide reductase, beta subunit [Rothia mucilaginosa DY-18]
          Length = 325

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   +       E ++ +  +L+E    E+AY H  
Sbjct: 187 TADLIRLIIRDEAVHGYYIGYKFQQGLAKESAERQAELKEYTFNLLYELYENEVAYTHSL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FF 120
                VG +    ++++ + AN+    +G EP+F  +  N  P +   +    ++N  FF
Sbjct: 247 Y--DGVGWS-EDVKKFLHYNANKALMNLGYEPMFPASVTNVSPAILSALSPNADENHDFF 303

Query: 121 ETRVTEYQQGAGL-----KWD 136
               + Y  G  +      WD
Sbjct: 304 SGSGSSYVIGKAVNTEDEDWD 324


>gi|307944765|ref|ZP_07660103.1| ribonucleoside-diphosphate reductase, beta subunit [Roseibium sp.
           TrichSKD4]
 gi|307771979|gb|EFO31202.1| ribonucleoside-diphosphate reductase, beta subunit [Roseibium sp.
           TrichSKD4]
          Length = 329

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 61/142 (42%), Gaps = 13/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +++        +E +  + +++ +   +E  Y  E+
Sbjct: 191 TADLIRLIIRDEAVHGYYIGYKFQRMQETLSEAERQEIKDFAFSLMFDLYEIEGKY-TES 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNF 119
           +  G  GL     + ++ + AN+    +G E LF  +    NP   M+ +  +  +  +F
Sbjct: 250 LYDGV-GLT-EDVKHFLHYNANKALMNLGYEALFPDSVCQVNPAI-MAALSPNADENHDF 306

Query: 120 FETRVTEYQQGAGL-----KWD 136
           F    + Y  G  +      WD
Sbjct: 307 FSGSGSSYVIGKAVATEDEDWD 328


>gi|322372696|ref|ZP_08047232.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C150]
 gi|321277738|gb|EFX54807.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C150]
          Length = 319

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F++    +L+E    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQESFREWMYDLLYELYENEELYTKSL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DGVGWTEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 295


>gi|116670901|ref|YP_831834.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter sp.
           FB24]
 gi|116611010|gb|ABK03734.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Arthrobacter sp. FB24]
          Length = 324

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y H+ 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQKGLEKVSEEKRQEIKDYTFELLFELYENEVQYTHDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VGL A   ++++ + AN+    +G E +F  +    NP     +S   D     +
Sbjct: 246 Y--DSVGL-AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVNTEDEDWD 323


>gi|327189837|gb|EGE56975.1| ribonucleoside-diphosphate reductase protein, beta subunit
           [Rhizobium etli CNPAF512]
          Length = 324

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y  E 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQRGLERLSEERRQEIKDFAFDLLLELYDNEARY-TEA 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 245 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVATEDEDWD 323


>gi|82793227|ref|XP_727957.1| ribonucleotide reductase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23484058|gb|EAA19522.1| ribonucleotide reductase, putative [Plasmodium yoelii yoelii]
          Length = 373

 Score = 59.6 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE L  +F +   N       HL  K   +        A  LE  +  + +   F+ 
Sbjct: 213 IQRDEYLQGDFSVMCCN-------HLNNKLRYENVLNYFKAAVELEYNFCVDMLDFDFLK 265

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 106
           +     +Q++Q++A+     +     +  ++ PF W
Sbjct: 266 ITKDQVKQFLQYLADTMLLNLKYPKHYN-SKYPFAW 300


>gi|555172|gb|AAA46037.1| herpesvirus saimiri gene 60 homologue (aa 177 to 258); putative
          [Bovine herpesvirus 4]
          Length = 82

 Score = 59.6 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 9/86 (10%)

Query: 3  GIAEQYQYIMRDESLHLNFGIDVINQI--KIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
          G+     YI RDE LH      + N +    + PH+           +  EA  +E  + 
Sbjct: 3  GVCLANDYISRDELLHTRAAALLYNTMVSGADKPHML------WVHNLFKEAVEVEHEFI 56

Query: 61 HETMPKGFVGLNAPSCEQYMQFIANR 86
                G   +N      +++  A+R
Sbjct: 57 -LVKSSGVSAVNVDDIRSFLEATADR 81


>gi|296118681|ref|ZP_06837257.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295968170|gb|EFG81419.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 329

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 45/98 (45%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDES+H  +      Q   +      +E++  +  ++++    E+ Y  + 
Sbjct: 191 TADIIRLIIRDESVHGYYIGYKYQQGVKKLSEEKQQEYKDYTFDLMYDLYENELEYTEDI 250

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 251 YDD--LGWT-EDVKRFLRYNANKALNNLGYEGLFPTDE 285


>gi|311741200|ref|ZP_07715024.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311303370|gb|EFQ79449.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 329

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 44/98 (44%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   +       E ++ +  ++++    EI Y  + 
Sbjct: 191 TADIIRLIIRDEAVHGYYIGYKFQQAYKQLDEEHQAELKEYTFDLVYDLYDNEIDYTEDL 250

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 251 YDD--LGWT-EDVKRFLRYNANKALNNLGFEGLFPADE 285


>gi|227494314|ref|ZP_03924630.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           coleocanis DSM 15436]
 gi|226832048|gb|EEH64431.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           coleocanis DSM 15436]
          Length = 322

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 10/132 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E+     +E +  +  +L+E    E  +  + 
Sbjct: 184 TADLIRLIIRDEAVHGYYIGYKYQLGVRESSEARQQELKDYTFDLLYELYDNEEQFTEDL 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                +GL     ++++++ AN+    +G E LF       NP     +S   D     +
Sbjct: 244 Y--DPLGLT-EDVKKFLRYNANKALMNLGYEALFPAESCDVNPAILASLSPNADENH--D 298

Query: 119 FFETRVTEYQQG 130
           FF    + Y  G
Sbjct: 299 FFSGSGSSYVIG 310


>gi|27467432|ref|NP_764069.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis ATCC 12228]
 gi|57866341|ref|YP_187991.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis RP62A]
 gi|251810165|ref|ZP_04824638.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282875687|ref|ZP_06284558.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis SK135]
 gi|293368193|ref|ZP_06614822.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|27314975|gb|AAO04111.1|AE016745_210 ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           epidermidis ATCC 12228]
 gi|57636999|gb|AAW53787.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus epidermidis RP62A]
 gi|251806217|gb|EES58874.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281295714|gb|EFA88237.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis SK135]
 gi|291317616|gb|EFE58033.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|329723280|gb|EGG59810.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU144]
 gi|329736749|gb|EGG73014.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU028]
 gi|329737954|gb|EGG74178.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU045]
          Length = 322

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  Q+   +L+E    E++Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           H       +GL A     Y+++  N+    +G EP F+  E NP   +   +D   +  +
Sbjct: 241 HLLYDD--IGL-AEDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|327489434|gb|EGF21227.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1058]
          Length = 319

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DTVGWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|253990649|ref|YP_003042005.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782099|emb|CAQ85263.1| ribonucleoside-diphosphate reductase 2 beta chain [Photorhabdus
           asymbiotica]
          Length = 319

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 58/150 (38%), Gaps = 29/150 (19%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   + P+   KE +  + ++L +    EI Y  + 
Sbjct: 181 TADLIRLIIRDEAIHGYYIGYKFQQSLNKYPNSEKKEIKDFTFSLLFDLYENEIKYTEDL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID----------- 112
                VG      ++++ + AN+    +G E LF         +SE+ D           
Sbjct: 241 Y--DIVGWT-EDVKKFLHYNANKALMNLGYEALF---------LSEMTDVSPAILSALSP 288

Query: 113 -LKKEKNFFETRVTEYQQGAGL-----KWD 136
              +  +FF    + Y  G  +      WD
Sbjct: 289 GANENHDFFSGSGSSYVIGKAVNTEDEDWD 318


>gi|242242101|ref|ZP_04796546.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis W23144]
 gi|242234414|gb|EES36726.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis W23144]
 gi|319401190|gb|EFV89405.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           epidermidis FRI909]
          Length = 322

 Score = 59.2 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  Q+   +L+E    E++Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           H       +GL A     Y+++  N+    +G EP F+  E NP   +   +D   +  +
Sbjct: 241 HLLYDD--IGL-ADDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|229823057|ref|ZP_04449126.1| hypothetical protein GCWU000282_00352 [Catonella morbi ATCC 51271]
 gi|229787496|gb|EEP23610.1| hypothetical protein GCWU000282_00352 [Catonella morbi ATCC 51271]
          Length = 336

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 5/119 (4%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P     E +     +  +    E  Y    
Sbjct: 197 VAEIIKLIIRDESVHGTYTGYKFQLGYNELPEDQQAELKMWVYELCMDLYQNEAKYTQSL 256

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 120
                VG      + ++++ AN+    +G +PLF  T        M+ +       +FF
Sbjct: 257 Y--DQVGWT-EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGISTGTSNHDFF 312


>gi|307104534|gb|EFN52787.1| hypothetical protein CHLNCDRAFT_10712 [Chlorella variabilis]
          Length = 214

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE 32
           M G+    + I RDE LH +F   +   ++  
Sbjct: 183 MPGLTFSNEMISRDEGLHTDFACHLYELLQNR 214


>gi|317506846|ref|ZP_07964618.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974]
 gi|316254774|gb|EFV14072.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974]
          Length = 332

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 59/143 (41%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +    +     +E +  + ++L +    E+ Y  + 
Sbjct: 194 TADLIRLIIRDEAVHGYYIGYKYQRGLAASTEQRREELKDFTFSLLFDLYENEVEYTQDL 253

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+  + +G E LF   E   NP     +S   D     +
Sbjct: 254 Y--DPVGLT-EDVKKFLRYNANKALNNLGYEGLFPKDETSVNPAILSALSPNADENH--D 308

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 309 FFSGSGSSYVIGKAVATEDEDWD 331


>gi|242372965|ref|ZP_04818539.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W1]
 gi|242349291|gb|EES40892.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W1]
          Length = 322

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  Q+   +L+E    E++Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           H       +GL       Y+++  N+    +G EP F+  E NP   +   +D   +  +
Sbjct: 241 HLLYDD--IGLT-EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|125717616|ref|YP_001034749.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK36]
 gi|323352633|ref|ZP_08087603.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis VMC66]
 gi|125497533|gb|ABN44199.1| Ribonucleoside-diphosphate reductase 2, beta subunit, putative
           [Streptococcus sanguinis SK36]
 gi|322121669|gb|EFX93415.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis VMC66]
 gi|325688330|gb|EGD30349.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK72]
 gi|325690076|gb|EGD32080.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK115]
          Length = 319

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DTVGWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|241206478|ref|YP_002977574.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240860368|gb|ACS58035.1| Ribonucleoside-diphosphate reductase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 324

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y  E 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQRGLERLGDERKQEIKDFAFELLLELYDNEAKY-TEA 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 245 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVATEDEDWD 323


>gi|325694009|gb|EGD35927.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK150]
          Length = 319

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DTVGWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|255324325|ref|ZP_05365446.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           tuberculostearicum SK141]
 gi|255298655|gb|EET77951.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           tuberculostearicum SK141]
          Length = 329

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 44/98 (44%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   +       E ++ +  +L++    EI Y  + 
Sbjct: 191 TADIIRLIIRDEAVHGYYIGYKFQQAYKQLDEEHQAELKEYTFDLLYDLYDNEIDYTEDL 250

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 251 YDD--LGWT-EDVKRFLRYNANKALNNLGFEGLFPADE 285


>gi|327458665|gb|EGF05013.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1057]
          Length = 319

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DTVGWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|223043034|ref|ZP_03613082.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           capitis SK14]
 gi|314933044|ref|ZP_07840410.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           caprae C87]
 gi|222443888|gb|EEE49985.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           capitis SK14]
 gi|313654363|gb|EFS18119.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           caprae C87]
          Length = 322

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  Q+   +L+E    E++Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSESEKQKADQEMYKLLNELYDNEVSYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           H       +GL       Y+++  N+    +G EP F+  E NP   +   +D   +  +
Sbjct: 241 HLLYDD--IGLT-EDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|254471227|ref|ZP_05084629.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudovibrio
           sp. JE062]
 gi|211959373|gb|EEA94571.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudovibrio
           sp. JE062]
          Length = 325

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  + T+L +   LE  Y  + 
Sbjct: 187 TADLIRLIIRDEAVHGYYIGYKFQRGLERLSEAERTEIKDFAFTLLFDLYDLETKYTEDL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                +GL     + ++ +  N+    +G E LF  T    NP     +S   D     +
Sbjct: 247 Y--DPLGLT-EDVKHFLHYNGNKALQNLGFEGLFPETICQVNPAIMASLSPNADENH--D 301

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 302 FFSGSGSSYVIGKAVATEDEDWD 324


>gi|300859086|ref|YP_003784069.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686540|gb|ADK29462.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206792|gb|ADL11134.1| Ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis C231]
 gi|302331346|gb|ADL21540.1| Ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis 1002]
 gi|308277038|gb|ADO26937.1| Ribonucleotide reductase, beta subunit [Corynebacterium
           pseudotuberculosis I19]
          Length = 328

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   E      +E ++ +  +L++    EI Y  + 
Sbjct: 190 TADIIRLIIRDEAVHGYYIGYKYQQAVREQTPERQEELKEYTFDLLYDLYDNEIQYTEDL 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 250 YDD--LGWT-EDVKRFLRYNANKALNNLGYEGLFPADE 284


>gi|259046997|ref|ZP_05737398.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Granulicatella adiacens ATCC 49175]
 gi|259036316|gb|EEW37571.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Granulicatella adiacens ATCC 49175]
          Length = 346

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 5/119 (4%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +      Q   E      +E +     +  E    E+ Y    
Sbjct: 207 VAEIIKLIIRDESVHGTYTGYKFQQGYNELSEQEQEEMKMWVYNLCLELYQNEVKYTQSI 266

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 120
                VG      + ++++ AN+    +G +PLF  T        M+ +       +FF
Sbjct: 267 Y--DQVGWT-EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGISTGTSNHDFF 322


>gi|255327220|ref|ZP_05368295.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           mucilaginosa ATCC 25296]
 gi|255295838|gb|EET75180.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           mucilaginosa ATCC 25296]
          Length = 325

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       E ++ +  +L+E    E+AY H  
Sbjct: 187 TADLIRLIIRDEAVHGYYIGYKFQRGLAKESAERQAELKEYTFNLLYELYENEVAYTHSL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FF 120
                VG +    ++++ + AN+    +G EP+F  T  N  P +   +    ++N  FF
Sbjct: 247 Y--DGVGWS-EDVKKFLHYNANKALMNLGYEPMFPATVTNVSPAILSALSPNADENHDFF 303

Query: 121 ETRVTEYQQGAGL-----KWD 136
               + Y  G  +      WD
Sbjct: 304 SGSGSSYVIGKAVNTEDEDWD 324


>gi|269794349|ref|YP_003313804.1| ribonucleoside-diphosphate reductase class Ib subunit beta
           [Sanguibacter keddieii DSM 10542]
 gi|269096534|gb|ACZ20970.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Sanguibacter keddieii DSM 10542]
          Length = 325

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       E +  +  +L E    E+ Y  + 
Sbjct: 187 TADLIRLIIRDEAVHGYYIGYKYQKGLEKLSPAERDEMKAYTFELLFELYENEVQYTADL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 247 Y--DGVGLT-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--D 301

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 302 FFSGSGSSYVIGKAVNTEDEDWD 324


>gi|296086890|emb|CBI33063.3| unnamed protein product [Vitis vinifera]
          Length = 75

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL 113
           +NA    QY++F+A+     IG E  +   ENPF WM E I L
Sbjct: 1   MNATLMSQYIKFVADHLLVAIGYERKYN-VENPFDWM-EFISL 41


>gi|203454817|ref|YP_002225133.1| gp256 [Mycobacterium phage Myrna]
 gi|197311865|gb|ACH62223.1| gp256 [Mycobacterium phage Myrna]
          Length = 322

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 55/140 (39%), Gaps = 12/140 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E  Y  + 
Sbjct: 184 TADMIRLIIRDEAVHGYYIGYKFQKGLEKETKARQQELKDYTYELLFELFDNEQEYTQDL 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
                 G      ++++++  N+    +G + LF  ++   NP   +   +    ++N  
Sbjct: 244 Y--DATGQT-EDVKKFLRYNGNKALQNLGYDALFSRSDCDVNPA--ILSALSPGGDENHD 298

Query: 119 FFETRVTEY--QQGAGLKWD 136
           FF    + Y   +G   + D
Sbjct: 299 FFSGSGSTYVMAKGVVTEDD 318


>gi|157149762|ref|YP_001450838.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gordonii str. Challis substr. CH1]
 gi|157074556|gb|ABV09239.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 319

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  ET
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TET 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295


>gi|262283137|ref|ZP_06060904.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. 2_1_36FAA]
 gi|262261389|gb|EEY80088.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. 2_1_36FAA]
          Length = 319

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  ET
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGY-TET 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295


>gi|38234491|ref|NP_940258.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38200754|emb|CAE50457.1| ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium
           diphtheriae]
          Length = 341

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 20/149 (13%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +     P     E  + + ++  E   +E AY  + 
Sbjct: 196 TADMIRLILRDKAVHGYYSGYKYQRGLELKPERAN-EMAEFTYSLCDELLDMEKAYTADL 254

Query: 64  MP-----KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL----- 113
                      GL       ++ + A++    +G EP ++        +S  I       
Sbjct: 255 YAPADQANALEGLTLDGVMSFVYYNADKALMNLGYEPAYEEQA---AHVSPEIIAALTPE 311

Query: 114 -KKEKNFFETRVTEYQQGAGLK-----WD 136
             +  +FF    + Y  G   +     WD
Sbjct: 312 SNETHDFFSGSGSAYIIGTAEETTEEDWD 340


>gi|240849861|ref|YP_002971249.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           grahamii as4aup]
 gi|240266984|gb|ACS50572.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           grahamii as4aup]
          Length = 324

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 12/140 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +      KE +  +  +L +   +E  Y  + 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQLGFAKLDEAKKKEIKDFAFNLLFDLYNIECKYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                +GL     + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 246 Y--DALGLT-EDVKIFLHYNANKALMNLGFEALFPPEVCRVNPA--ILAALSPNSDENHD 300

Query: 119 FFETRVTEYQ--QGAGLKWD 136
           FF    + Y   +      D
Sbjct: 301 FFSGAGSSYVIGKAVATTDD 320


>gi|5230837|gb|AAD41037.1|AF112536_1 ribonucleotide reductase beta-chain [Corynebacterium glutamicum]
          Length = 334

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 12/140 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E ++ +  +L++    E  Y+ + 
Sbjct: 196 TADVIRLIIRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDL 255

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKN 118
                +G      ++++++IAN+  + +G E LF   E     N    +S   D     +
Sbjct: 256 YDD--LGWT-EDVKRFLRYIANKALNNLGYEGLFPADETKVSPNILSALSPNADENH--D 310

Query: 119 FFETRVTEYQ--QGAGLKWD 136
           FF    + Y   +    + D
Sbjct: 311 FFSGSGSSYVIGKAENTEDD 330


>gi|49475007|ref|YP_033048.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           henselae str. Houston-1]
 gi|49237812|emb|CAF27007.1| Ribonucleotide reductase beta-chain [Bartonella henselae str.
           Houston-1]
          Length = 324

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 12/140 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +      KE +  +  +L +   +E  Y  + 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQLGFAKLDETKKKEVKDFAFNLLFDLYNIECKYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                +GL     + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 246 Y--DALGLT-EDVKIFLHYNANKALMNLGFEALFPSEVCRVNPA--ILAALSPNSDENHD 300

Query: 119 FFETRVTEYQ--QGAGLKWD 136
           FF    + Y   +      D
Sbjct: 301 FFSGAGSSYVIGKAVATTDD 320


>gi|260426338|ref|ZP_05780317.1| ribonucleoside-diphosphate reductase, beta subunit [Citreicella sp.
           SE45]
 gi|260420830|gb|EEX14081.1| ribonucleoside-diphosphate reductase, beta subunit [Citreicella sp.
           SE45]
          Length = 324

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 14/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E   +E  Y  E 
Sbjct: 187 TADLIRLIIRDEAVHGYYIGYKFQRAMERETAERRQELKDYAFGLLFELYEIEGHYTEEL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NF 119
                +GL     + ++ + AN+    +G E LF       NP   +   +    E  +F
Sbjct: 247 YDD--LGLT-EEVKSFLHYNANKALQNLGFEALFPPEACEVNPA--ILAALSPDSENHDF 301

Query: 120 FETRVTEYQQGAGL-----KWD 136
           F    + Y  G  +      WD
Sbjct: 302 FSGSGSSYVIGRAVATEDDDWD 323


>gi|308187851|ref|YP_003931982.1| ribonucleoside-diphosphate reductase beta chain [Pantoea vagans
           C9-1]
 gi|308058361|gb|ADO10533.1| ribonucleoside-diphosphate reductase beta chain [Pantoea vagans
           C9-1]
          Length = 326

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q       L  +E QQ +  +L      E+AY    
Sbjct: 188 TADLIRLIIRDEAVHGYYIGYKYQQALASADDLRREELQQFAYDLLLALYENEVAYTEAL 247

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKN 118
                VG      + ++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 248 YGD--VGW-VDEVKTFLHYNANKALMNLGYEALFPAELTAVNPAILSALSPNADENH--D 302

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 303 FFSGSGSSYVMGKAVE 318


>gi|296393703|ref|YP_003658587.1| ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM
           44985]
 gi|296180850|gb|ADG97756.1| Ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM
           44985]
          Length = 334

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +    +     +E +  + ++L +    E+ Y  + 
Sbjct: 196 TADLIRLIIRDEAVHGYYIGYKYQRGLQMSTPERREELKDFTFSLLFDLYENEVEYTQDL 255

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 256 Y--DPVGLT-EDVKKFLRYNANKALMNLGYEGLFPKDETAVNPAILSALSPNADENH--D 310

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 311 FFSGSGSSYVIGKAVATEDEDWD 333


>gi|312862767|ref|ZP_07723007.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           vestibularis F0396]
 gi|322516573|ref|ZP_08069487.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           vestibularis ATCC 49124]
 gi|311101627|gb|EFQ59830.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           vestibularis F0396]
 gi|322124843|gb|EFX96267.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           vestibularis ATCC 49124]
          Length = 320

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F++    +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQESFREWMYDLLYQLYENEELYTKSL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DGVGWTEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 295


>gi|289178104|gb|ADC85350.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 326

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  +L+E    E+ Y H  
Sbjct: 188 TADVIRLIIRDEAVHGYYIGYKYQKGLEMASDAKRAEMETYTYDLLNELYENEVEYTHSL 247

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                VGL+    E+++ + AN+    +G   LF       NP   +   +    ++N  
Sbjct: 248 Y--DEVGLS-DDVEKFLHYNANKALMNLGYPALFPSEICDVNPA--ILAALSPNADENHD 302

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G   + D
Sbjct: 303 FFSGSGSSYVMGRAEETD 320


>gi|183601891|ref|ZP_02963260.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219682805|ref|YP_002469188.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241190381|ref|YP_002967775.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|241195787|ref|YP_002969342.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|183218776|gb|EDT89418.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219620455|gb|ACL28612.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240248773|gb|ACS45713.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240250341|gb|ACS47280.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|295793368|gb|ADG32903.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 321

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  +L+E    E+ Y H  
Sbjct: 183 TADVIRLIIRDEAVHGYYIGYKYQKGLEMASDAKRAEMETYTYDLLNELYENEVEYTHSL 242

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                VGL+    E+++ + AN+    +G   LF       NP   +   +    ++N  
Sbjct: 243 Y--DEVGLS-DDVEKFLHYNANKALMNLGYPALFPSEICDVNPA--ILAALSPNADENHD 297

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G   + D
Sbjct: 298 FFSGSGSSYVMGRAEETD 315


>gi|94990703|ref|YP_598803.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10270]
 gi|94544211|gb|ABF34259.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10270]
          Length = 320

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F+     +L++    E  Y   T
Sbjct: 181 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-T 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 240 LYDGV-GWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|319938784|ref|ZP_08013148.1| ribonucleoside-diphosphate reductase [Streptococcus anginosus
           1_2_62CV]
 gi|319811834|gb|EFW08100.1| ribonucleoside-diphosphate reductase [Streptococcus anginosus
           1_2_62CV]
          Length = 319

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F++    +L+     E  Y  ET
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQETFREWMYDLLYTLYENEEGY-TET 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295


>gi|22536982|ref|NP_687833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae 2603V/R]
 gi|25010891|ref|NP_735286.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae NEM316]
 gi|76788606|ref|YP_329564.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae A909]
 gi|76799231|ref|ZP_00781405.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 18RS21]
 gi|77405557|ref|ZP_00782648.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae H36B]
 gi|77408849|ref|ZP_00785576.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae COH1]
 gi|77413113|ref|ZP_00789313.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 515]
 gi|22533837|gb|AAM99705.1|AE014229_6 ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           agalactiae 2603V/R]
 gi|23095270|emb|CAD46480.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76563663|gb|ABA46247.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           agalactiae A909]
 gi|76585414|gb|EAO61998.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 18RS21]
 gi|77160814|gb|EAO71925.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 515]
 gi|77172535|gb|EAO75677.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae COH1]
 gi|77175864|gb|EAO78642.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae H36B]
 gi|319744839|gb|EFV97177.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae ATCC 13813]
          Length = 319

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F+     +L++    E  Y   T
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-T 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|19746348|ref|NP_607484.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS8232]
 gi|50914444|ref|YP_060416.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10394]
 gi|71903783|ref|YP_280586.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS6180]
 gi|94994624|ref|YP_602722.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10750]
 gi|139473584|ref|YP_001128300.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes str. Manfredo]
 gi|19748543|gb|AAL97983.1| ribonucleotide diphosphate reductase small subunit [Streptococcus
           pyogenes MGAS8232]
 gi|50903518|gb|AAT87233.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10394]
 gi|71802878|gb|AAX72231.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS6180]
 gi|94548132|gb|ABF38178.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10750]
 gi|134271831|emb|CAM30066.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pyogenes str. Manfredo]
          Length = 319

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F+     +L++    E  Y   T
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-T 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|15675308|ref|NP_269482.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes M1 GAS]
 gi|21910586|ref|NP_664854.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS315]
 gi|28895723|ref|NP_802073.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes SSI-1]
 gi|71910937|ref|YP_282487.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS5005]
 gi|94988801|ref|YP_596902.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS9429]
 gi|94992686|ref|YP_600785.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS2096]
 gi|306826388|ref|ZP_07459706.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes ATCC 10782]
 gi|13622486|gb|AAK34203.1| ribonucleotide diphosphate reductase small subunit [Streptococcus
           pyogenes M1 GAS]
 gi|21904787|gb|AAM79657.1| putative ribonucleoside-diphosphate reductase 2 beta subunit
           [Streptococcus pyogenes MGAS315]
 gi|28810972|dbj|BAC63906.1| putative ribonucleotide diphosphate reductase, small subunit
           [Streptococcus pyogenes SSI-1]
 gi|71853719|gb|AAZ51742.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS5005]
 gi|94542309|gb|ABF32358.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS9429]
 gi|94546194|gb|ABF36241.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS2096]
 gi|304431419|gb|EFM34410.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes ATCC 10782]
          Length = 319

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F+     +L++    E  Y   T
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-T 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|322412098|gb|EFY03006.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 319

 Score = 58.1 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F++    +L++    E  Y   T
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEAEQETFREWMYDLLYQLYENEEDYTK-T 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|308068541|ref|YP_003870146.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
 gi|305857820|gb|ADM69608.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
          Length = 321

 Score = 58.1 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 5/135 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E    I+RDES+H  +   +  +I  E      ++  Q    +L      E  Y 
Sbjct: 180 MTCSGEIIDLILRDESIHGVYVGVLAQEIYAELAEEEQRDLYQTLVGLLRYLHNNEEQYT 239

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNF 119
            +      +GL     + ++++ AN+    +G +PLF+  E NP  + + +    K+ +F
Sbjct: 240 EQIY--TPIGL-VDDVKVFLRYNANKAMMNLGFDPLFEEEEVNPIVF-NGISTHTKQHDF 295

Query: 120 FETRVTEYQQGAGLK 134
           F  +   Y +   ++
Sbjct: 296 FSKKGNGYVRAMNVE 310


>gi|121602770|ref|YP_988676.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           bacilliformis KC583]
 gi|120614947|gb|ABM45548.1| ribonucleoside-diphosphate reductase, beta subunit [Bartonella
           bacilliformis KC583]
          Length = 324

 Score = 58.1 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 52/135 (38%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +      +E +  +  ML +   +E  Y  + 
Sbjct: 186 TADLIRLIIRDEAIHGYYIGYKFQLGFAKLNEAQKQEMKDFTFNMLFDLYNIECKYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                +GL     + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 246 Y--DSLGLT-EDVKVFLHYNANKALMNLGFESLFPSEVCRVNPA--ILAALSPNSDENHD 300

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 301 FFSGSGSSYVIGKAV 315


>gi|220912864|ref|YP_002488173.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter
           chlorophenolicus A6]
 gi|219859742|gb|ACL40084.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
           A6]
          Length = 324

 Score = 58.1 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y H+ 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQRALETVSEERRQEIKDYTFELLFELYENEVQYTHDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VGL A   ++++ + AN+    +G E +F  +    NP     +S   D     +
Sbjct: 246 Y--DGVGL-AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVNTEDEDWD 323


>gi|212716021|ref|ZP_03324149.1| hypothetical protein BIFCAT_00933 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661388|gb|EEB21963.1| hypothetical protein BIFCAT_00933 [Bifidobacterium catenulatum DSM
           16992]
          Length = 330

 Score = 58.1 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  +L+E    E+ Y    
Sbjct: 192 TADVIRLIIRDEAVHGYYIGYKYQKGLERVSEDKRGELRDYTYDLLNELYDNEVEYTRSL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKN 118
                VGL     E+++++  N+    +G   LF       NP     +S   D     +
Sbjct: 252 YE--PVGLT-QDVEKFLRYNGNKALMNLGYPALFPQEICDVNPSILAALSPNADENH--D 306

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G  ++ D
Sbjct: 307 FFSGSGSSYVMGKSVETD 324


>gi|324993305|gb|EGC25225.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK405]
 gi|324995391|gb|EGC27303.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK678]
 gi|325697177|gb|EGD39064.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK160]
 gi|327461576|gb|EGF07907.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1]
 gi|327473300|gb|EGF18720.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK408]
          Length = 319

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DTVGWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|184201049|ref|YP_001855256.1| ribonucleoside-diphosphate reductase beta subunit [Kocuria
           rhizophila DC2201]
 gi|183581279|dbj|BAG29750.1| ribonucleoside-diphosphate reductase beta subunit [Kocuria
           rhizophila DC2201]
          Length = 326

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 23/147 (15%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +  ++      +E +  +  +L E    E+AYA   
Sbjct: 188 TADLIRLIIRDEAVHGYYIGYKYQKGLLQESPQRQQELKDYTYDLLDELYENEVAYAEAL 247

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLK 114
                VG      ++++ + AN+  + +G E LF         M++V          +  
Sbjct: 248 Y--DSVGWT-EDVKKFLHYNANKALNNLGYEALFPRE------MTDVSPAILSSLSPNAD 298

Query: 115 KEKNFFETRVTEYQQGAGL-----KWD 136
           +  +FF    + Y  G  +      WD
Sbjct: 299 ENHDFFSGSGSSYVIGKAVNTEDEDWD 325


>gi|256015100|ref|YP_003105109.1| ribonucleotide-diphosphate reductase beta subunit [Brucella microti
           CCM 4915]
 gi|255997760|gb|ACU49447.1| ribonucleotide-diphosphate reductase beta subunit [Brucella microti
           CCM 4915]
          Length = 329

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  E 
Sbjct: 191 TADLIRLIIRDEAVHGYYIGHKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEA 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 250 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 305

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 306 FFSGSGSSYVIGKAV 320


>gi|55821276|ref|YP_139718.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           thermophilus LMG 18311]
 gi|55823189|ref|YP_141630.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           thermophilus CNRZ1066]
 gi|116628014|ref|YP_820633.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           thermophilus LMD-9]
 gi|55737261|gb|AAV60903.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus
           thermophilus LMG 18311]
 gi|55739174|gb|AAV62815.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus
           thermophilus CNRZ1066]
 gi|116101291|gb|ABJ66437.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Streptococcus thermophilus LMD-9]
 gi|312278606|gb|ADQ63263.1| Ribonucleoside-diphosphate reductase class Ib beta subunit
           [Streptococcus thermophilus ND03]
          Length = 320

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F++    +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEKEQESFREWMYDLLYQLYENEELYTKSL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DGVGWTEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 295


>gi|228476905|ref|ZP_04061550.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           salivarius SK126]
 gi|228251479|gb|EEK10624.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           salivarius SK126]
          Length = 319

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F++    +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQESFREWMYDLLYQLYENEELYTKSL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DGVGWTEEVM-TFLRYNANKALMNLGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 295


>gi|86156146|gb|ABC86791.1| ribonucleotide reductase beta subunit [Borrelia turicatae]
          Length = 321

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 17/137 (12%)

Query: 1   MVGIAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           M+   E    I+RDES+H  F      +  N++         KE    +  +L     LE
Sbjct: 181 MINSGEIINLILRDESVHGVFVGLLAQEEFNKMTSREQEFAYKE----AMFILDRLYDLE 236

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDL 113
            AY  +      +GL +   + ++++ A++    +G EP F   +   NP   +   +  
Sbjct: 237 KAYTKDLY--SSIGLESA-VDVFVRYNADKALMNLGFEPTFNIQDIDVNPL--VLNGLRT 291

Query: 114 KKEK-NFFETRVTEYQQ 129
             +  +FF T+   Y +
Sbjct: 292 DTKTHDFFSTKGNGYIK 308


>gi|56808544|ref|ZP_00366279.1| COG0208: Ribonucleotide reductase, beta subunit [Streptococcus
           pyogenes M49 591]
 gi|209559615|ref|YP_002286087.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes NZ131]
 gi|209540816|gb|ACI61392.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Streptococcus pyogenes NZ131]
          Length = 319

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F+     +L++    E  Y   T
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-T 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|328945482|gb|EGG39633.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1087]
          Length = 319

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DTVGWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|324990559|gb|EGC22495.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK353]
          Length = 319

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLSFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DTVGWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|77410697|ref|ZP_00787056.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae CJB111]
 gi|77163233|gb|EAO74185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae CJB111]
          Length = 319

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F+     +L++    E  Y   T
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQENFRDWMYDLLYQLYENEEKYTK-T 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|119961248|ref|YP_948075.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter
           aurescens TC1]
 gi|119948107|gb|ABM07018.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter
           aurescens TC1]
          Length = 324

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y H+ 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQKGLEKVSEARKQEIKDYTFELLFELYENEVQYTHDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VGL A   ++++ + AN+    +G E +F  +    NP     +S   D     +
Sbjct: 246 Y--DGVGL-AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  + 
Sbjct: 301 FFSGSGSSYVIGKAVN 316


>gi|256832970|ref|YP_003161697.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM
           20603]
 gi|256686501|gb|ACV09394.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM
           20603]
          Length = 325

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L+E    E+AY  E+
Sbjct: 187 TADLIRLIIRDEAVHGYYIGYKYQKGLEAVTPERREELKAYTFDLLYELYDNEVAY-TES 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 246 LYDGV-GLT-EDVKKFLRYNANKALLNLGYEALFPKDETDVNPAILSALSPNADENH--D 301

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 302 FFSGSGSSYVIGKAVNTEDEDWD 324


>gi|68068657|ref|XP_676239.1| ribonucleotide reductase small subunit [Plasmodium berghei strain
           ANKA]
 gi|56495842|emb|CAH97095.1| ribonucleotide reductase small subunit, putative [Plasmodium
           berghei]
          Length = 299

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE L  +F +   N       HL  K   +        A  LE  +  + +   F+ 
Sbjct: 177 IQRDEYLQGDFSVMCCN-------HLNNKLKYESVLYYFKSAVELEYNFCVDMLDFNFLK 229

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPW 106
           +     +Q++Q++A+     +     F  ++ PF W
Sbjct: 230 ITKEQVKQFLQYLADTMLLNLKYPKHFN-SKYPFTW 264


>gi|311064961|ref|YP_003971687.1| ribonucleoside-diphosphate reductase subunit beta NrdF
           [Bifidobacterium bifidum PRL2010]
 gi|310867281|gb|ADP36650.1| NrdF Ribonucleoside-diphosphate reductase beta chain
           [Bifidobacterium bifidum PRL2010]
          Length = 330

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E ++ +  +L+E    E+ Y    
Sbjct: 192 TADVIRLIIRDEAVHGYYIGYKYQRGLERVSDAKREEMREYTYNLLNELYDNEVEYTESL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
             +  VGL     E+++++  N+    +G   LF       NP   +   +    ++N  
Sbjct: 252 YER--VGLT-DDVEKFLRYNGNKALMNLGYPALFPAEACDVNPA--ILAALSPNADENHD 306

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G   + D
Sbjct: 307 FFSGSGSSYVMGKAEETD 324


>gi|224283650|ref|ZP_03646972.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           bifidum NCIMB 41171]
 gi|310288088|ref|YP_003939347.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
           bifidum S17]
 gi|313140805|ref|ZP_07802998.1| ribonucleoside-diphosphate reductase subunit beta [Bifidobacterium
           bifidum NCIMB 41171]
 gi|309252025|gb|ADO53773.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
           bifidum S17]
 gi|313133315|gb|EFR50932.1| ribonucleoside-diphosphate reductase subunit beta [Bifidobacterium
           bifidum NCIMB 41171]
          Length = 330

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E ++ +  +L+E    E+ Y    
Sbjct: 192 TADVIRLIIRDEAVHGYYIGYKYQRGLERVSDAKREEMREYTYNLLNELYDNEVEYTESL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
             +  VGL     E+++++  N+    +G   LF       NP   +   +    ++N  
Sbjct: 252 YER--VGLT-DDVEKFLRYNGNKALMNLGYPALFPAEACDVNPA--ILAALSPNADENHD 306

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G   + D
Sbjct: 307 FFSGSGSSYVMGKAEETD 324


>gi|323127635|gb|ADX24932.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 319

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F++    +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEAEQETFREWMYDLLYQLYENEEDYTKSL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 240 Y--DGVGWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|116253995|ref|YP_769833.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115258643|emb|CAK09747.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 324

 Score = 58.1 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y  E 
Sbjct: 186 TADMVRLIIRDEAVHGYYIGYKFQRGLERLGDERKQEIKDFAFELLLELYDNEAKY-TEA 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 245 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVATEDEDWD 323


>gi|289167885|ref|YP_003446154.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis B6]
 gi|288907452|emb|CBJ22289.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis B6]
          Length = 321

 Score = 57.7 bits (139), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 181 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 296


>gi|190893561|ref|YP_001980103.1| ribonucleoside-diphosphate reductase protein, beta subunit
           [Rhizobium etli CIAT 652]
 gi|190698840|gb|ACE92925.1| ribonucleoside-diphosphate reductase protein, beta subunit
           [Rhizobium etli CIAT 652]
          Length = 324

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          ++ +  +  +L E    E  Y  E 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQRGLERLSEERRQQIKDFAFDLLLELYDNEARY-TEA 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G +GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 245 LYDG-LGLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVATEDEDWD 323


>gi|310641424|ref|YP_003946182.1| ribonucleoside-diphosphate reductase beta chain [Paenibacillus
           polymyxa SC2]
 gi|309246374|gb|ADO55941.1| Ribonucleoside-diphosphate reductase beta chain [Paenibacillus
           polymyxa SC2]
          Length = 321

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 5/132 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  +   +  +I  E      ++  Q    +L      E  Y  + 
Sbjct: 183 SGEIIDLILRDESIHGVYVGVLAQEIYAELDEEEQRDLYQTLVGLLRYLHNNEEQYTEQI 242

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFET 122
                +GL     + ++++ AN+    +G +PLF+  E NP  + + +    K+ +FF  
Sbjct: 243 Y--APIGL-VDDVKVFLRYNANKAMMNLGFDPLFEEEEVNPIVF-NGISTHTKQHDFFSK 298

Query: 123 RVTEYQQGAGLK 134
           +   Y +   ++
Sbjct: 299 KGNGYVRAMNVE 310


>gi|327468920|gb|EGF14392.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK330]
          Length = 319

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P     + ++    +L+     E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLAFNELPEDEQNKLKEWMYDLLYTLYENEEGYTESL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DTVGWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|224475873|ref|YP_002633479.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222420480|emb|CAL27294.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 324

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      +   Q    +L E    E++Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQHLRNELSENEKQRADQHMYKLLEELYKNEVSYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           H+      +GL A     Y+++  N+    +G EP F+  E NP   +   +D   +  +
Sbjct: 241 HKLYDD--IGL-AEDVLNYVRYNGNKALSNLGFEPYFEEREFNPI--IENALDTSTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|222102712|ref|YP_002539751.1| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium
           vitis S4]
 gi|221739313|gb|ACM40046.1| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium
           vitis S4]
          Length = 329

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y  E 
Sbjct: 191 TADMIRLIIRDEAVHGYYIGYKFQRGLEPLSEEQRQETKDFAFDLLLELYDNEAKY-TEA 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 250 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPPEACKVNPAILSALSPNADENH--D 305

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 306 FFSGSGSSYVIGKAVATEDEDWD 328


>gi|218680499|ref|ZP_03528396.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli
           CIAT 894]
          Length = 324

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y    
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQRGLELLGEERRQELKDFAFDLLLELYDNEARYTEAL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
             +  VGL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 246 YDR--VGLT-EDVKEFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVATEDEDWD 323


>gi|222153355|ref|YP_002562532.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           uberis 0140J]
 gi|222114168|emb|CAR42683.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus uberis 0140J]
          Length = 319

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E      + F++    +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELSEDKQESFREWMYDLLYQLYENEEEYTKTL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 240 Y--DPVGWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|260583950|ref|ZP_05851698.1| ribonucleoside-diphosphate reductase, beta subunit [Granulicatella
           elegans ATCC 700633]
 gi|260158576|gb|EEW93644.1| ribonucleoside-diphosphate reductase, beta subunit [Granulicatella
           elegans ATCC 700633]
          Length = 336

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 5/119 (4%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +      Q   E P    +  +     +  E    E+ Y    
Sbjct: 197 VAEIIKLIIRDESVHGTYTGYKFQQGYNELPLEEQETLKMWVYQLCLELYQNEVKYTQSI 256

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVIDLKKEKNFF 120
                VG      + ++++ AN+    +G +PLF  T        M+ +       +FF
Sbjct: 257 Y--DQVGWT-EKVKVFIRYNANKALQNLGFDPLFPDTAEDVDPIVMNGISTGTSNHDFF 312


>gi|251782830|ref|YP_002997133.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242391460|dbj|BAH81919.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 319

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F++    +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEAEQETFREWMYDLLYQLYENEENYTKSL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 240 Y--DGVGWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|111023403|ref|YP_706375.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
           jostii RHA1]
 gi|110822933|gb|ABG98217.1| ribonucleotide reductase [Rhodococcus jostii RHA1]
          Length = 321

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       + +  +  +L E    E+ Y  + 
Sbjct: 183 TADLIRLIIRDEAVHGYYIGYKYQKGLEQLTEAERDDLKNYTFELLFELYDNEVDYTQDL 242

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 243 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--D 297

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 298 FFSGSGSSYVIGKAVNTEDEDWD 320


>gi|322385107|ref|ZP_08058754.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           cristatus ATCC 51100]
 gi|321270731|gb|EFX53644.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           cristatus ATCC 51100]
          Length = 321

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|307704819|ref|ZP_07641714.1| ribonucleoside-diphosphate reductase 2 subunit beta [Streptococcus
           mitis SK597]
 gi|307708708|ref|ZP_07645171.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           mitis NCTC 12261]
 gi|307709353|ref|ZP_07645811.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis SK564]
 gi|307615282|gb|EFN94492.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           mitis NCTC 12261]
 gi|307619936|gb|EFN99054.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis SK564]
 gi|307621648|gb|EFO00690.1| ribonucleoside-diphosphate reductase 2 subunit beta [Streptococcus
           mitis SK597]
          Length = 320

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|322831489|ref|YP_004211516.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
 gi|321166690|gb|ADW72389.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
          Length = 327

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          ++ ++++  ++ +    EI Y  E 
Sbjct: 189 TADLIRLIIRDEAVHGYYIGYKFQKALALESEERQRQIKEQAFDLIQDLYDNEIRYTEEL 248

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VG +    ++++ + AN+    +G E LF  +    NP     +S   D     +
Sbjct: 249 Y--DGVGWS-EDVKKFLHYNANKALMNLGYEALFPASMADVNPAILSALSPNADENH--D 303

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 304 FFSGSGSSYVIGKAVNTEDEDWD 326


>gi|319947340|ref|ZP_08021573.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           australis ATCC 700641]
 gi|319746582|gb|EFV98842.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           australis ATCC 700641]
          Length = 319

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|307706628|ref|ZP_07643435.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           mitis SK321]
 gi|307618083|gb|EFN97243.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           mitis SK321]
          Length = 320

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|218709884|ref|YP_002417505.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           splendidus LGP32]
 gi|218322903|emb|CAV19080.1| Ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           splendidus LGP32]
          Length = 323

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 10/139 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +                    + ++ +++     +E  Y    
Sbjct: 185 TADLIRLIIRDEAIHGYYIGYKFQLAYQSLSEEEQARVKDEAYSLMFSLYEIETQYTESL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNF 119
                VGL     + ++ + AN+    +G E LF       NP   M+ +  +  +  +F
Sbjct: 245 Y--DPVGLT-EDVKHFLHYNANKALMNLGFEALFPDELCQVNPAI-MAALSPNADENHDF 300

Query: 120 FETRVTEYQ--QGAGLKWD 136
           F    + Y   +    + D
Sbjct: 301 FSGSGSSYVIGKAVATEDD 319


>gi|322376536|ref|ZP_08051029.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. M334]
 gi|321282343|gb|EFX59350.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. M334]
          Length = 320

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|226365904|ref|YP_002783687.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
           opacus B4]
 gi|226244394|dbj|BAH54742.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus opacus
           B4]
          Length = 321

 Score = 57.7 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       + +  +  +L E    E+ Y  + 
Sbjct: 183 TADLIRLIIRDEAVHGYYIGYKYQKGLEQLTEAERDDLKNYTFELLFELYDNEVDYTQDL 242

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E LF   E   NP     +S   D     +
Sbjct: 243 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEGLFPKDETDVNPAILSALSPNADENH--D 297

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 298 FFSGSGSSYVIGKAVNTEDEDWD 320


>gi|212712928|ref|ZP_03321056.1| hypothetical protein PROVALCAL_04026 [Providencia alcalifaciens DSM
           30120]
 gi|212684406|gb|EEB43934.1| hypothetical protein PROVALCAL_04026 [Providencia alcalifaciens DSM
           30120]
          Length = 323

 Score = 57.7 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  + ++L +    EI Y  E 
Sbjct: 185 TADLIRLIIRDEAIHGYYIGYKFQKALAHYSEQERNEIKDFTFSLLLDLYENEIKYTQEL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
                VG +    + ++ + AN+    +G E LF  +      +S  I      D  +  
Sbjct: 245 Y--DGVGWS-EDVKSFLHYNANKALMNLGYEALFPDS---ITQVSPEILSALSPDANENH 298

Query: 118 NFFETRVTEYQ--QGAGLKWD 136
           +FF    + Y   +    + D
Sbjct: 299 DFFSGSGSSYVIGKAVSTEDD 319


>gi|319406095|emb|CBI79725.1| ribonucleoside-diphosphate reductase beta chain [Bartonella sp. AR
           15-3]
          Length = 324

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +      +E +  +  +L +   +E  Y  + 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQLGFAKLHEAKKQEIKDFAFNILFDLYNIECKYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                +GL     + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 246 Y--DAIGLT-EDVKVFLHYNANKALMNLGFEALFPPEVCRVNPA--ILAALSPNSDENHD 300

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 301 FFSGSGSSYVIGKAV 315


>gi|86148040|ref|ZP_01066342.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|85834173|gb|EAQ52329.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
          Length = 320

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 10/139 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +                    + ++ +++     +E  Y    
Sbjct: 182 TADLIRLIIRDEAIHGYYIGYKFQLAYQSLSEEEQARVKDEAYSLMFSLYEIETQYTESL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENPFPWMSEVI-DLKKEKNF 119
                VGL     + ++ + AN+    +G E LF       NP   M+ +  +  +  +F
Sbjct: 242 Y--DPVGLT-EDVKHFLHYNANKALMNLGFEALFPDELCQVNPAI-MAALSPNADENHDF 297

Query: 120 FETRVTEYQ--QGAGLKWD 136
           F    + Y   +    + D
Sbjct: 298 FSGSGSSYVIGKAVATEDD 316


>gi|296140644|ref|YP_003647887.1| ribonucleoside-diphosphate reductase [Tsukamurella paurometabola
           DSM 20162]
 gi|296028778|gb|ADG79548.1| Ribonucleoside-diphosphate reductase [Tsukamurella paurometabola
           DSM 20162]
          Length = 334

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y    
Sbjct: 196 TADMIRLIIRDEAVHGYYIGYKYQRGLETESPQRREELKDYTFDLLMELYANEEDYTESL 255

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL+    ++++++ AN+    +G E LF       NP     +S   D     +
Sbjct: 256 Y--DEVGLS-EDVKKFLRYNANKALMNLGYEALFPKDATDVNPAILSALSPNADENH--D 310

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 311 FFSGSGSSYVIGKAVNTEDEDWD 333


>gi|293365329|ref|ZP_06612046.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|306825287|ref|ZP_07458629.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. oral taxon 071 str. 73H25AP]
 gi|307703869|ref|ZP_07640810.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|315613100|ref|ZP_07888010.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis ATCC 49296]
 gi|291316779|gb|EFE57215.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|304432723|gb|EFM35697.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. oral taxon 071 str. 73H25AP]
 gi|307622704|gb|EFO01700.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|315314662|gb|EFU62704.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis ATCC 49296]
          Length = 320

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|331266449|ref|YP_004326079.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           oralis Uo5]
 gi|326683121|emb|CBZ00739.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           oralis Uo5]
          Length = 320

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|306829459|ref|ZP_07462649.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           mitis ATCC 6249]
 gi|304428545|gb|EFM31635.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           mitis ATCC 6249]
          Length = 320

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|33340378|gb|AAQ14729.1|AF320576_197 putative ribonucleoside diphosphate reductase beta chain
           [Enterobacteria phage Felix 01]
          Length = 377

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 9/132 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAY 59
           GIA+  Q IM DE LH    I+V+ +   ++   W K FQQ   + + +L E    E  +
Sbjct: 231 GIAQAVQKIMLDEILHTKIDIEVLKETLRDD--EWQKAFQQILPEIKVILDEVVESEEKW 288

Query: 60  AHETM--PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKE 116
           ++      +  VGLN     +++ + A       G+   F   +  P  +M + +++ KE
Sbjct: 289 SYYIFSEGRAVVGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKE 348

Query: 117 KNF-FETRVTEY 127
           +N   E +   Y
Sbjct: 349 QNANQEQQNGAY 360


>gi|326333061|ref|ZP_08199312.1| ribonucleoside-diphosphate reductase, beta subunit [Nocardioidaceae
           bacterium Broad-1]
 gi|325949135|gb|EGD41224.1| ribonucleoside-diphosphate reductase, beta subunit [Nocardioidaceae
           bacterium Broad-1]
          Length = 334

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 18/136 (13%)

Query: 8   YQYIMRDESLHLNFGIDVINQIKIEN-PHLWTKEFQQKSRTML------------HEATL 54
             +  RDE+LH   G  + N    E    +   +F+ +   +             HEA +
Sbjct: 194 INFSARDENLHATGGAWLFNTTLDEYAATVPADKFEAERDDLFARVRGVAEHLYAHEARI 253

Query: 55  LEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENP-FPWMSEVIDL 113
           +E+ +AH        G+     E +++   +     + +EPLF    NP   W    I+ 
Sbjct: 254 VEMLFAH----GPITGIEQADLEAFVRSRIDMTLENMRMEPLFGVEPNPVAEWFYAGING 309

Query: 114 KKEKNFFETRVTEYQQ 129
            +  +FF+    EY +
Sbjct: 310 TQFHDFFQVTGNEYNR 325


>gi|259417680|ref|ZP_05741599.1| ribonucleoside-diphosphate reductase, beta subunit [Silicibacter
           sp. TrichCH4B]
 gi|259346586|gb|EEW58400.1| ribonucleoside-diphosphate reductase, beta subunit [Silicibacter
           sp. TrichCH4B]
          Length = 325

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 13/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          KE +  +  +L +   +E  Y  E 
Sbjct: 187 TADLIRLIIRDEAIHGYYIGYKFQRGMERLSEAERKELKDFAFGLLFDLYDIEARY-TEQ 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NF 119
           +  G +GL     + ++ + AN+    +G E LF       NP   M+ +     E  +F
Sbjct: 246 LYDG-LGLT-EDVKNFLHYNANKALQNLGFEALFPEETCRVNPAI-MAALSPGSDENHDF 302

Query: 120 FETRVTEYQQGAG-----LKWD 136
           F    + Y  G         WD
Sbjct: 303 FSGSGSSYVIGKAEATEDEDWD 324


>gi|312867164|ref|ZP_07727374.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parasanguinis F0405]
 gi|311097293|gb|EFQ55527.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parasanguinis F0405]
          Length = 321

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 182 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 241 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 297


>gi|38707874|ref|NP_944994.1| Ribonucleoside triphosphate reductase, beta chain [Enterobacteria
           phage Felix 01]
 gi|238801854|ref|YP_002922904.1| ribonucleoside triphosphate reductase, beta chain [Enterobacteria
           phage WV8]
 gi|33340477|gb|AAQ14828.1| putative ribonucleoside diphosphate reductase beta chain
           [Enterobacteria phage Felix 01]
 gi|216263067|gb|ACJ71935.1| ribonucleoside triphosphate reductase, beta chain [Enterobacteria
           phage WV8]
          Length = 357

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 9/132 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAY 59
           GIA+  Q IM DE LH    I+V+ +   ++   W K FQQ   + + +L E    E  +
Sbjct: 211 GIAQAVQKIMLDEILHTKIDIEVLKETLRDD--EWQKAFQQILPEIKVILDEVVESEEKW 268

Query: 60  AHETM--PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKE 116
           ++      +  VGLN     +++ + A       G+   F   +  P  +M + +++ KE
Sbjct: 269 SYYIFSEGRAVVGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKE 328

Query: 117 KNF-FETRVTEY 127
           +N   E +   Y
Sbjct: 329 QNANQEQQNGAY 340


>gi|328543067|ref|YP_004303176.1| Ribonucleoside-diphosphate reductase, beta subunit [Polymorphum
           gilvum SL003B-26A1]
 gi|326412813|gb|ADZ69876.1| Ribonucleoside-diphosphate reductase, beta subunit [Polymorphum
           gilvum SL003B-26A1]
          Length = 325

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 55/142 (38%), Gaps = 13/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  + +++ +   +E  Y    
Sbjct: 187 TADLIRLIIRDEAVHGYYIGYKFQRGLETVSEAERQEIKDFAFSLMFDLYAIEAKYTESL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVI-DLKKEKNF 119
                VGL     + ++ + AN+    +G E LF       NP   M+ +  +  +  +F
Sbjct: 247 --CDGVGLT-EDVKHFLHYNANKALMNLGYEALFPDAVCAVNPAI-MAALSPNADENHDF 302

Query: 120 FETRVTEYQQGAGL-----KWD 136
           F    + Y  G  +      WD
Sbjct: 303 FSGSGSSYVIGKAVATEDEDWD 324


>gi|296876816|ref|ZP_06900864.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 15912]
 gi|296432318|gb|EFH18117.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 15912]
          Length = 321

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 182 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 241 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 297


>gi|270292678|ref|ZP_06198889.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           sp. M143]
 gi|270278657|gb|EFA24503.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           sp. M143]
          Length = 322

 Score = 57.3 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|241888586|ref|ZP_04775893.1| ribonucleoside-diphosphate reductase, beta subunit [Gemella
           haemolysans ATCC 10379]
 gi|241864609|gb|EER68984.1| ribonucleoside-diphosphate reductase, beta subunit [Gemella
           haemolysans ATCC 10379]
          Length = 322

 Score = 57.3 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 15/137 (10%)

Query: 4   IAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
             E  + I+ DE++H +F      +V   +  E      KE       +L +    E+ Y
Sbjct: 185 SGEVIRKILLDETIHGSFTGFDAQEVFKTLTAEEQERAEKEM----YKLLLDLYENELVY 240

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK- 117
             +   +  +GL     + Y+++ ANR    +G    F+  E NP   +   ++   +  
Sbjct: 241 TKDIYSE--IGL-YEEVKDYVEYNANRALANLGYPGYFEDKEINPI--IENAMNTNTKNH 295

Query: 118 NFFETRVTEYQQGAGLK 134
           +FF  +   Y     ++
Sbjct: 296 DFFSVKGDGYVVSMNVE 312


>gi|322389171|ref|ZP_08062732.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 903]
 gi|321144076|gb|EFX39493.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 903]
          Length = 321

 Score = 57.3 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 182 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQEKLKEWMYDLLYTLYENEEGY-TES 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 241 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 297


>gi|92112513|ref|YP_572441.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter
           salexigens DSM 3043]
 gi|91795603|gb|ABE57742.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Chromohalobacter salexigens DSM 3043]
          Length = 326

 Score = 57.3 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 10/132 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q          +E +  +  +L E    E+ Y    
Sbjct: 188 TADLIRLIIRDEAVHGYYIGYKFQQALARESAERQQEIKDATFDLLLELYDNEVHYTESL 247

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
                VGL     + ++ + AN+    +G EPLF       NP   +   +    E+N  
Sbjct: 248 YDD--VGLT-EEVKAFLHYNANKALMNLGYEPLFPGATEAVNPA--ILAALSPGAEENHD 302

Query: 119 FFETRVTEYQQG 130
           FF    + Y  G
Sbjct: 303 FFSGSGSSYVIG 314


>gi|309800432|ref|ZP_07694593.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           infantis SK1302]
 gi|308115948|gb|EFO53463.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           infantis SK1302]
          Length = 319

 Score = 57.3 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ +     +L+     E  Y  E+
Sbjct: 179 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEDEQEKLKDWMYDLLYTLYENEEGY-TES 237

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 238 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 294


>gi|114766102|ref|ZP_01445111.1| ribonucleoside-diphosphate reductase, beta subunit protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114541657|gb|EAU44698.1| ribonucleoside-diphosphate reductase, beta subunit protein
           [Roseovarius sp. HTCC2601]
          Length = 326

 Score = 57.3 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 16/143 (11%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVI-NQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
            A+  + I+RDE++H  +        +++E+P    +E +  +  +L E   +E  Y  E
Sbjct: 189 TADLIRLIIRDEAVHGYYIGYKFQRGLELESPERR-QELKDYAFGLLFELYDIEARYTEE 247

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-N 118
                 +GL     + ++ + AN+    +G E LF       NP   +   +    E  +
Sbjct: 248 LY--DGIGLT-EEVKAFLHYNANKALQNLGFEALFPPEAAEVNPA--ILAALSPDSENHD 302

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 303 FFSGSGSSYVIGRAVATEDDDWD 325


>gi|304398691|ref|ZP_07380563.1| Ribonucleoside-diphosphate reductase [Pantoea sp. aB]
 gi|304353902|gb|EFM18277.1| Ribonucleoside-diphosphate reductase [Pantoea sp. aB]
          Length = 326

 Score = 57.3 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q       L  +E QQ +  +L      E+AY    
Sbjct: 188 TADLIRLIIRDEAVHGYYIGYKYQQALATADDLRREELQQFAYDLLLALYENEVAYTEAL 247

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKN 118
                VG      + ++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 248 YAD--VGW-VEEVKTFLHYNANKALMNLGYEALFPAELTAVNPAILSALSPNADENH--D 302

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 303 FFSGSGSSYVMGKAVE 318


>gi|269975299|gb|ACZ55523.1| ribonucleoside diphosphate reductase beta chain [Staphylococcus
           phage SA1]
          Length = 357

 Score = 57.3 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 9/132 (6%)

Query: 3   GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQ---KSRTMLHEATLLEIAY 59
           GIA+  Q IM DE LH    I+V+ +   ++   W K FQQ   + + +L E    E  +
Sbjct: 211 GIAQAVQKIMLDEILHTKIDIEVLKETLRDD--EWQKAFQQILPEIKVILDEVVESEEKW 268

Query: 60  AHETM--PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKE 116
           ++      +  VGLN     +++ + A       G+   F   +  P  +M + +++ KE
Sbjct: 269 SYYIFSEGRAVVGLNTKLLHEWVYYNAAPLYDMFGIPRDFVAPKEPPLKYMIKKMEIDKE 328

Query: 117 KNF-FETRVTEY 127
           +N   E +   Y
Sbjct: 329 QNANQEQQNGAY 340


>gi|329117318|ref|ZP_08246035.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parauberis NCFD 2020]
 gi|326907723|gb|EGE54637.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parauberis NCFD 2020]
          Length = 321

 Score = 57.3 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E      ++F++    +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELSEEKQEDFKEWMYDLLYQLYENEENYTKSL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 240 Y--DQVGWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|309786253|ref|ZP_07680881.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           dysenteriae 1617]
 gi|308925998|gb|EFP71477.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           dysenteriae 1617]
          Length = 301

 Score = 57.3 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 160 TADLIRLIIRDEAVHGYYIGYKYQKSLEKISEAQREELKSFAFDLLLELYDNELQYTDEL 219

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 220 YAETPW---ADDVKTFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 274

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 275 FFSGSSSSYVMGKAVE 290


>gi|82778048|ref|YP_404397.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae Sd197]
 gi|81242196|gb|ABB62906.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           dysenteriae Sd197]
          Length = 322

 Score = 57.3 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKSLEKISEAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKTFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSSSSYVMGKAVE 311


>gi|322387902|ref|ZP_08061509.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           infantis ATCC 700779]
 gi|321141175|gb|EFX36673.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           infantis ATCC 700779]
          Length = 320

 Score = 57.3 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ +     +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKDWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|171779596|ref|ZP_02920552.1| hypothetical protein STRINF_01433 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281698|gb|EDT47132.1| hypothetical protein STRINF_01433 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 144

 Score = 57.3 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 7/123 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  IAE  + I+RDES+H  +          E       + +     +L++    E  Y 
Sbjct: 1   MANIAEIIKLIIRDESVHGTYIGYKFQLGFNELSEKEQDDLRDWMYDLLYQLYENEENYT 60

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
                   VG        ++++ AN+    +G +PLF  T    NP   M+ +       
Sbjct: 61  KTLY--DQVGWT-EEVLTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNH 116

Query: 118 NFF 120
           +FF
Sbjct: 117 DFF 119


>gi|315641368|ref|ZP_07896443.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           italicus DSM 15952]
 gi|315482861|gb|EFU73382.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           italicus DSM 15952]
          Length = 321

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +            P     E +     +L E    E  Y  E 
Sbjct: 181 VAEIIKLIIRDESVHGTYIGYKFQLGFQALPEAEQAELKDWMYGLLFELYENEENYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
             +  +G  A   + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 241 YGE--IGW-AEEVKTFLRYNANKALMNMGQDPLFPDSANDVNPIV-MNGISTGTSNHDFF 296


>gi|320546423|ref|ZP_08040738.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equinus ATCC 9812]
 gi|320448808|gb|EFW89536.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equinus ATCC 9812]
          Length = 320

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E       E +     +L++    E  Y    
Sbjct: 181 VAEIIKLIIRDESVHGTYIGYKFQLGFNELSEDKQDELRDWMYDLLYQLYENEENYTKSL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 241 Y--DEVGWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|300780546|ref|ZP_07090401.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           genitalium ATCC 33030]
 gi|300533532|gb|EFK54592.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           genitalium ATCC 33030]
          Length = 333

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 43/98 (43%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +       E ++ +  +L++    EI Y  + 
Sbjct: 195 TADIIRLIIRDEAVHGYYIGYKYQVGLRDESQQRQDELKEHAFDLLYDLYDNEIQYTEDL 254

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 255 Y--DPLGWT-EDVKRFLRYNANKALNNLGYEGLFPVDE 289


>gi|227876446|ref|ZP_03994558.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35243]
 gi|269976014|ref|ZP_06183018.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
 gi|306817405|ref|ZP_07451150.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307700420|ref|ZP_07637459.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
 gi|227842987|gb|EEJ53184.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35243]
 gi|269935842|gb|EEZ92372.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
 gi|304649846|gb|EFM47126.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307614405|gb|EFN93635.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
          Length = 322

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 54/134 (40%), Gaps = 10/134 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E+     +E +  + ++L +    E+ Y    
Sbjct: 184 TADLIRLIIRDEAVHGYYIGYKFQVAMRESSSSRQEELRDYTYSLLTDLYDNEVLYTETL 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKN 118
                +GL     ++++ + AN+    +G E LF   E   NP   +   +    ++  +
Sbjct: 244 Y--DTLGLT-EDVKKFLHYNANKALMNLGYEALFPPEEIDVNPA--ILAALSPAAEENHD 298

Query: 119 FFETRVTEYQQGAG 132
           FF    + Y  G  
Sbjct: 299 FFSGSGSSYTIGTA 312


>gi|183598095|ref|ZP_02959588.1| hypothetical protein PROSTU_01459 [Providencia stuartii ATCC 25827]
 gi|188020253|gb|EDU58293.1| hypothetical protein PROSTU_01459 [Providencia stuartii ATCC 25827]
          Length = 323

 Score = 56.9 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 23/147 (15%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +  ++      KE +  + ++L +    E+ Y  E 
Sbjct: 185 TADLIRLIIRDEAIHGYYIGYKFQKSLLKYDEKTQKEIKDFTFSLLFDLYENEVNYTQEL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLK 114
                VG      ++++ + AN+    +G E LF         +++V          D  
Sbjct: 245 Y--DTVGWT-EDVKKFLHYNANKALMNLGYEALFPDV------VTDVSPAILSALSPDAN 295

Query: 115 KEKNFFETRVTEYQQGAGLK-----WD 136
           +  +FF    + Y  G  +      WD
Sbjct: 296 ENHDFFSGSGSSYVIGKAVSTEDDDWD 322


>gi|170017903|ref|YP_001728822.1| ribonucleotide reductase, beta subunit [Leuconostoc citreum KM20]
 gi|169804760|gb|ACA83378.1| Ribonucleotide reductase, beta subunit [Leuconostoc citreum KM20]
          Length = 324

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+ +AE  + I+RDES+H  +          + P   +   Q     +L+E    E  Y 
Sbjct: 182 MLNVAEIIKLIIRDESVHGTYIGYKFQIGFNKLPESESTALQSWMYDLLYELYENEEKYT 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 98
           HE      +G        ++++ AN+    +G EP+F 
Sbjct: 242 HELYDD--LGWT-EQVLTFLRYNANKALMNLGQEPMFP 276


>gi|73663294|ref|YP_302075.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|72495809|dbj|BAE19130.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 322

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E       +  Q+   +L +    E+AY 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGMDAQSLRNELSESEKLQADQEMYKLLDDLYKNEVAYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           H       +GL A     Y+++  N+    +G +P F+  E NP   +   +D   +  +
Sbjct: 241 HSLYDD--IGL-AEDVLNYVRYNGNKALSNLGFDPYFEEREFNPI--IENALDTTTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|225351964|ref|ZP_03742987.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157211|gb|EEG70550.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 330

 Score = 56.9 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  +L+E    E+ Y    
Sbjct: 192 TADVIRLIIRDEAVHGYYIGYKYQKGLELVSEDKRGELRDYTYDLLNELYDNEVEYTRSL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKN 118
                VGL     E+++++  N+    +G   LF       NP     +S   D     +
Sbjct: 252 YE--PVGLT-QDVEKFLRYNGNKALMNLGYPALFPQEICDVNPSILAALSPNADENH--D 306

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G  ++ D
Sbjct: 307 FFSGSGSSYVMGKSVETD 324


>gi|67008229|emb|CAH18519.1| ribonucleoside-dihosphate reductase beta chain [Rhodobacteraceae
           bacterium 198]
          Length = 325

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 13/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          KE +  +  +L +   +E  Y  E 
Sbjct: 187 TADLIRLIIRDEAIHGYYIGYKFQRGLERVSEAERKEIKDFAFALLFDLYDIEARY-TEQ 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NF 119
           +  G +GL     + ++ + AN+    +G E LF       NP   M+ +     E  +F
Sbjct: 246 LYDG-LGLT-EDVKNFLHYNANKALQNLGFEALFPDESCRVNPAI-MAALSPGSDENHDF 302

Query: 120 FETRVTEYQQGAG-----LKWD 136
           F    + Y  G         WD
Sbjct: 303 FSGSGSSYVIGKAEATEDEDWD 324


>gi|229172094|ref|ZP_04299659.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           MM3]
 gi|228611437|gb|EEK68694.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           MM3]
          Length = 133

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 5/124 (4%)

Query: 12  MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 71
           ++DES+H  F   +  Q+ +E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQLFVELSAEDQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 60

Query: 72  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 130
                 +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  +   Y + 
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118

Query: 131 AGLK 134
             ++
Sbjct: 119 TNVE 122


>gi|227504013|ref|ZP_03934062.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
 gi|227199407|gb|EEI79455.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
          Length = 329

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E P    +E +  +  +L+E    EI Y  + 
Sbjct: 191 TADIIRLIIRDEAVHGYYIGYKFQNGYNELPAEKQEEIKGYTFDLLYELYDNEIDYTEDL 250

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 251 Y--DELGWT-EDVKRFLRYNANKALNNLGFEGLFPADE 285


>gi|222081801|ref|YP_002541166.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
           radiobacter K84]
 gi|221726480|gb|ACM29569.1| ribonucleoside-diphosphate reductase [Agrobacterium radiobacter
           K84]
          Length = 329

 Score = 56.9 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y  E 
Sbjct: 191 TADMIRLIIRDEAVHGYYIGYKFQRGLERLSEEGRQEIKDFAFDLLLELYDNEAKY-TEA 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 250 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPPEACKVNPAILSALSPNADENH--D 305

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 306 FFSGSGSSYVIGKAV 320


>gi|328958552|ref|YP_004375938.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
 gi|328674876|gb|AEB30922.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
          Length = 318

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 10/122 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P     +       +L +    E+AY  E 
Sbjct: 180 LAELIKLIIRDESVHGTYLGYKFQLTYNELPEEEQNKLLDWMYPLLEDLMENELAYTEEI 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-N 118
                +G+ A   + ++++ AN+    +G    +   +    NP   +   I ++    +
Sbjct: 240 YSH--IGI-AEDVKTFVRYNANKSLQNMGFPAYYDNADLADVNPI--VMNGISIETSNHD 294

Query: 119 FF 120
           FF
Sbjct: 295 FF 296


>gi|49473850|ref|YP_031892.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           quintana str. Toulouse]
 gi|49239353|emb|CAF25686.1| Ribonucleotide reductase beta-chain [Bartonella quintana str.
           Toulouse]
          Length = 324

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 12/140 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +      +E +  S  +L +   +E  Y  + 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQLGFAKLNESKKQEIKDFSFNLLFDLYNIECKYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKN 118
                +GL     + ++ + AN+    +G EPLF       NP     +S   D     +
Sbjct: 246 Y--DALGLT-EDVKVFLHYNANKALMNLGFEPLFPPEVCRVNPAILAALSPSSDENH--D 300

Query: 119 FFETRVTEYQ--QGAGLKWD 136
           FF    + Y   +      D
Sbjct: 301 FFSGAGSSYVIGKAVATTDD 320


>gi|319404590|emb|CBI78196.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           rochalimae ATCC BAA-1498]
 gi|319407580|emb|CBI81230.1| ribonucleoside-diphosphate reductase beta chain [Bartonella sp.
           1-1C]
          Length = 324

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +      +E +  +  +L +   +E  Y  + 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQLGFAKLDEAKKQEIKDFAFNLLFDLYNIECKYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                +GL     + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 246 Y--DAIGLT-EDVKVFLHYNANKALMNLGFEALFPPEVCRVNPA--ILAALSPNSDENHD 300

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 301 FFSGSGSSYVIGKAV 315


>gi|196040733|ref|ZP_03108032.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           NVH0597-99]
 gi|206977638|ref|ZP_03238531.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           H3081.97]
 gi|217958931|ref|YP_002337479.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus
           AH187]
 gi|222095088|ref|YP_002529148.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           Q1]
 gi|229138142|ref|ZP_04266740.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           BDRD-ST26]
 gi|229195652|ref|ZP_04322418.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           m1293]
 gi|196028523|gb|EDX67131.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           NVH0597-99]
 gi|206744211|gb|EDZ55625.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           H3081.97]
 gi|217064629|gb|ACJ78879.1| ribonucleoside-diphosphate reductase, subunit beta [Bacillus cereus
           AH187]
 gi|221239146|gb|ACM11856.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           Q1]
 gi|228587901|gb|EEK45953.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           m1293]
 gi|228645487|gb|EEL01721.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           BDRD-ST26]
          Length = 133

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%)

Query: 12  MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 71
           ++DES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 60

Query: 72  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 130
                 +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  +   Y + 
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118

Query: 131 AGLK 134
             ++
Sbjct: 119 TNVE 122


>gi|86359305|ref|YP_471197.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli
           CFN 42]
 gi|86283407|gb|ABC92470.1| ribonucleoside-diphosphate reductase, beta subunit protein
           [Rhizobium etli CFN 42]
          Length = 324

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y  E 
Sbjct: 186 TADMIRLIIRDEAVHGYYIGYKFQRGLETLSEERRQEIKYFAFDLLLELYDNEAKY-TEA 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL+    ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 245 LYDGV-GLS-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVATEDEDWD 323


>gi|38234435|ref|NP_940202.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38200698|emb|CAE50394.1| ribonucleotide reductase beta-chain 1 [Corynebacterium diphtheriae]
          Length = 328

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQ-IKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHE 62
            A+  + I+RDE++H  +      Q ++ E P     E +  +  +L++    EI Y  +
Sbjct: 190 TADIIRLIIRDEAVHGYYIGYKFQQALRKETPE-RQAELKGYTFDLLYDLYDNEIQYTED 248

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                 +G      ++++++ AN+  + +G E LF   E
Sbjct: 249 LYDD--LGWT-EDVKRFLRYNANKALNNLGYEALFPADE 284


>gi|326381484|ref|ZP_08203178.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199731|gb|EGD56911.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 333

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y    
Sbjct: 195 TADMIRLIIRDEAVHGYYIGYKYQRGLEVQTPERRQELKDYTFELLFELYDNETDYTEAL 254

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL+    ++++++ AN+    +G E +F   E   NP     +S   D     +
Sbjct: 255 Y--DEVGLS-EDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENH--D 309

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 310 FFSGSGSSYVIGKAVNTEDEDWD 332


>gi|300741626|ref|ZP_07071647.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           dentocariosa M567]
 gi|300380811|gb|EFJ77373.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           dentocariosa M567]
          Length = 325

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       E ++ +  +L+E    E+AY H  
Sbjct: 187 TADLIRLIIRDEAVHGYYIGYKFQRGLAKESPERQAELKEYTFNLLYELYENEVAYTHSL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FF 120
                VG +    ++++ + AN+    +G E +F  +  N  P +   +    ++N  FF
Sbjct: 247 Y--DGVGWS-EDVKKFLHYNANKALMNLGYEAMFPASVTNVSPAILSALSPNADENHDFF 303

Query: 121 ETRVTEYQQGAGL-----KWD 136
               + Y  G  +      WD
Sbjct: 304 SGSGSSYVIGKAVNTEDEDWD 324


>gi|306840845|ref|ZP_07473592.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           BO2]
 gi|306289240|gb|EFM60489.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           BO2]
          Length = 327

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  E 
Sbjct: 189 TADLIRLIIRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEA 247

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 248 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 303

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 304 FFSGSGSSYVIGKAV 318


>gi|261753311|ref|ZP_05997020.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 3 str. 686]
 gi|261743064|gb|EEY30990.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 3 str. 686]
          Length = 327

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  E 
Sbjct: 189 TADLIRLIIRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEA 247

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 248 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 303

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 304 FFSGSGSSYVIGKAV 318


>gi|24379140|ref|NP_721095.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           mutans UA159]
 gi|290580850|ref|YP_003485242.1| putative ribonucleotide reductase small subunit [Streptococcus
           mutans NN2025]
 gi|24377045|gb|AAN58401.1|AE014910_5 putative ribonucleotide reductase, small subunit [Streptococcus
           mutans UA159]
 gi|254997749|dbj|BAH88350.1| putative ribonucleotide reductase small subunit [Streptococcus
           mutans NN2025]
          Length = 319

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E       EF+     +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELSEEEQSEFRDWMYDLLYQLYENEELYTQTL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 240 Y--DPVGWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|94985875|ref|YP_605239.1| ribonucleotide-diphosphate reductase subunit beta [Deinococcus
           geothermalis DSM 11300]
 gi|94556156|gb|ABF46070.1| Ribonucleoside-diphosphate reductase [Deinococcus geothermalis DSM
           11300]
          Length = 319

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 51/136 (37%), Gaps = 9/136 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  + E +  I  DE+LH ++   +  +     P       + +   +  E    E AY 
Sbjct: 175 MSHMGEVFTLICADEALHGSYVGLLFQERFAALPQGEQAAVRARFEQLAREFYENECAYT 234

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-- 117
            E      VGL A   + ++++  N  C  +GLE LF   E NP   +   I        
Sbjct: 235 DEVY--AEVGL-ASEVKTFVRYNFNICCDNLGLERLFPEEEVNPL--VLNGIRATGGTTH 289

Query: 118 NFFETR-VTEYQQGAG 132
           +FF  +    Y +   
Sbjct: 290 DFFSIKGAGGYAKITA 305


>gi|148994532|ref|ZP_01823712.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP9-BS68]
 gi|147927202|gb|EDK78238.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP9-BS68]
          Length = 319

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295


>gi|227502986|ref|ZP_03933035.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
           49725]
 gi|306836783|ref|ZP_07469743.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           accolens ATCC 49726]
 gi|227076047|gb|EEI14010.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
           49725]
 gi|304567329|gb|EFM42934.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           accolens ATCC 49726]
          Length = 329

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   +      +E +  +  +  E    EI Y  + 
Sbjct: 191 TADIIRLIIRDEAVHGYYIGYKFQQEYKKLDEKRQEELKDYTFDLAFELYDNEIDYTEDL 250

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 251 Y--DELGWT-EDVKRFLRYNANKALNNLGFEGLFPADE 285


>gi|168489010|ref|ZP_02713209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP195]
 gi|183572389|gb|EDT92917.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP195]
 gi|332073523|gb|EGI84002.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA17570]
          Length = 320

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295


>gi|225686158|ref|YP_002734130.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis ATCC 23457]
 gi|256043236|ref|ZP_05446173.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256262715|ref|ZP_05465247.1| ribonucleotide reductase [Brucella melitensis bv. 2 str. 63/9]
 gi|260564448|ref|ZP_05834933.1| ribonucleotide reductase [Brucella melitensis bv. 1 str. 16M]
 gi|265989661|ref|ZP_06102218.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|225642263|gb|ACO02176.1| Ribonucleoside-diphosphate reductase [Brucella melitensis ATCC
           23457]
 gi|260152091|gb|EEW87184.1| ribonucleotide reductase [Brucella melitensis bv. 1 str. 16M]
 gi|263000330|gb|EEZ13020.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263092503|gb|EEZ16756.1| ribonucleotide reductase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410495|gb|ADZ67559.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis M28]
 gi|326553787|gb|ADZ88426.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis M5-90]
          Length = 329

 Score = 56.5 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  E 
Sbjct: 191 TADLIRLIIRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEA 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 250 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 305

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 306 FFSGSGSSYVIGKAV 320


>gi|225860977|ref|YP_002742486.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298229749|ref|ZP_06963430.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298255394|ref|ZP_06978980.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298502819|ref|YP_003724759.1| ribonucleoside-diphosphate reductase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|225727952|gb|ACO23803.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298238414|gb|ADI69545.1| ribonucleoside-diphosphate reductase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327389423|gb|EGE87768.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Streptococcus pneumoniae GA04375]
          Length = 320

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNMGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|296455120|ref|YP_003662264.1| ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184552|gb|ADH01434.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 330

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       + Q  +  +L+E    E+ Y    
Sbjct: 192 TADVIRLIIRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKN 118
             +  VGL     E+++++  N+    +G   LF       NP     +S   D     +
Sbjct: 252 YDR--VGLT-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILASLSPNADENH--D 306

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G   + D
Sbjct: 307 FFSGSGSSYVMGKAEETD 324


>gi|149013339|ref|ZP_01834070.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP19-BS75]
 gi|147762929|gb|EDK69876.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP19-BS75]
          Length = 320

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNMGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|15901045|ref|NP_345649.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae TIGR4]
 gi|111657123|ref|ZP_01407908.1| hypothetical protein SpneT_02001649 [Streptococcus pneumoniae
           TIGR4]
 gi|14972661|gb|AAK75289.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           pneumoniae TIGR4]
          Length = 320

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295


>gi|163844498|ref|YP_001622153.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           ATCC 23445]
 gi|163675221|gb|ABY39331.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 329

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  E 
Sbjct: 191 TADLIRLIIRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEA 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 250 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 305

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 306 FFSGSGSSYVIGKAV 320


>gi|281491477|ref|YP_003353457.1| ribonucleoside-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. lactis KF147]
 gi|281375195|gb|ADA64708.1| Ribonucleoside-diphosphate reductase, beta chain [Lactococcus
           lactis subsp. lactis KF147]
          Length = 325

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 6/106 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  AE  + I+RDES+H  +          E       EF+     +L++    E  Y+
Sbjct: 185 MINSAEIIKLIIRDESVHGTYIGYKFQLGFNELSEDEQGEFRDWMYELLYQLYENEEKYS 244

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 103
           H    K  VG        ++++ AN+    +G +PLF  T    NP
Sbjct: 245 HLLYDK--VGWT-DEVLTFLRYNANKALMNLGQDPLFPDTAADVNP 287


>gi|258622932|ref|ZP_05717948.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM573]
 gi|258624605|ref|ZP_05719543.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM603]
 gi|262165762|ref|ZP_06033499.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus VM223]
 gi|262171415|ref|ZP_06039093.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|258583152|gb|EEW07963.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM603]
 gi|258584871|gb|EEW09604.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM573]
 gi|261892491|gb|EEY38477.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|262025478|gb|EEY44146.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus VM223]
          Length = 323

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +       + +  + ++L +    E +Y    
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQLAYRQLDEAQQAQIKDYAFSLLFDLYEAEASYTEFL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                VGL     + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 245 Y--DPVGLT-EEVKHFLHYNANKALMNLGFEPLFPEEVCEVNPA--ILAALSPNADENHD 299

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 300 FFSGSGSSYVIGQAVATQDEDWD 322


>gi|228957728|ref|ZP_04119472.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228801971|gb|EEM48844.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 133

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%)

Query: 12  MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 71
           ++DES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQIFAELSTEEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 60

Query: 72  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 130
                 +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  +   Y + 
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118

Query: 131 AGLK 134
             ++
Sbjct: 119 TNVE 122


>gi|297567587|ref|YP_003686558.1| hypothetical protein Mesil_3232 [Meiothermus silvanus DSM 9946]
 gi|297567764|ref|YP_003686735.1| hypothetical protein Mesil_3416 [Meiothermus silvanus DSM 9946]
 gi|296852036|gb|ADH65050.1| hypothetical protein Mesil_3232 [Meiothermus silvanus DSM 9946]
 gi|296852213|gb|ADH65227.1| hypothetical protein Mesil_3416 [Meiothermus silvanus DSM 9946]
          Length = 323

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 9/131 (6%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDE++H  +   +  Q+    P       +   R  L + + LE AY  E 
Sbjct: 181 SGEIISLILRDEAIHGVYVGMLAQQVYARLPEGEQSRLRTALREDLEKLSALEEAYTEEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NF 119
                +G       ++ ++ A++    +G  P F       NP   +   I L+ +  +F
Sbjct: 241 Y--APIG-RVEEVRRFCRYNADKALMNLGQPPYFGVRAEEVNPV--VLAGISLRTKNHDF 295

Query: 120 FETRVTEYQQG 130
           F T+   Y + 
Sbjct: 296 FSTKGNGYVKA 306


>gi|149004132|ref|ZP_01828935.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP14-BS69]
 gi|237649545|ref|ZP_04523797.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae CCRI 1974]
 gi|237822455|ref|ZP_04598300.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|147757865|gb|EDK64875.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP14-BS69]
          Length = 320

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295


>gi|15903110|ref|NP_358660.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae R6]
 gi|116517162|ref|YP_816517.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae D39]
 gi|148985789|ref|ZP_01818917.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP3-BS71]
 gi|148990437|ref|ZP_01821595.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP6-BS73]
 gi|148999044|ref|ZP_01826476.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP11-BS70]
 gi|149008157|ref|ZP_01831676.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP18-BS74]
 gi|149026429|ref|ZP_01836566.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP23-BS72]
 gi|168483243|ref|ZP_02708195.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1873-00]
 gi|168486506|ref|ZP_02711014.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1087-00]
 gi|168491101|ref|ZP_02715244.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC0288-04]
 gi|168493105|ref|ZP_02717248.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC3059-06]
 gi|168577270|ref|ZP_02723064.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae MLV-016]
 gi|169833110|ref|YP_001694622.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae Hungary19A-6]
 gi|182684087|ref|YP_001835834.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae CGSP14]
 gi|194397329|ref|YP_002037788.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae G54]
 gi|225854653|ref|YP_002736165.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae JJA]
 gi|225856856|ref|YP_002738367.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae P1031]
 gi|225858968|ref|YP_002740478.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae 70585]
 gi|303255568|ref|ZP_07341620.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae BS455]
 gi|303260588|ref|ZP_07346554.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP-BS293]
 gi|303262722|ref|ZP_07348661.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP14-BS292]
 gi|303265256|ref|ZP_07351167.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS397]
 gi|303267603|ref|ZP_07353445.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS457]
 gi|303269940|ref|ZP_07355678.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS458]
 gi|307067834|ref|YP_003876800.1| ribonucleotide reductase subunit beta [Streptococcus pneumoniae
           AP200]
 gi|307127225|ref|YP_003879256.1| ribonucleoside-diphosphate reductase subunit beta [Streptococcus
           pneumoniae 670-6B]
 gi|15458689|gb|AAK99870.1| Nonessential ribonucleoside-diP reductase 2, subunit beta, class I,
           function unknown [Streptococcus pneumoniae R6]
 gi|116077738|gb|ABJ55458.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae D39]
 gi|147755114|gb|EDK62169.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP11-BS70]
 gi|147760396|gb|EDK67375.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP18-BS74]
 gi|147922093|gb|EDK73216.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP3-BS71]
 gi|147924289|gb|EDK75383.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP6-BS73]
 gi|147929260|gb|EDK80261.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP23-BS72]
 gi|168995612|gb|ACA36224.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae Hungary19A-6]
 gi|172043347|gb|EDT51393.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1873-00]
 gi|182629421|gb|ACB90369.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae CGSP14]
 gi|183570430|gb|EDT90958.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1087-00]
 gi|183574343|gb|EDT94871.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC0288-04]
 gi|183576617|gb|EDT97145.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC3059-06]
 gi|183577169|gb|EDT97697.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae MLV-016]
 gi|194356996|gb|ACF55444.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           pneumoniae G54]
 gi|225720498|gb|ACO16352.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae 70585]
 gi|225724090|gb|ACO19943.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae JJA]
 gi|225725515|gb|ACO21367.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae P1031]
 gi|301794279|emb|CBW36700.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae INV104]
 gi|301800116|emb|CBW32717.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae OXC141]
 gi|301801954|emb|CBW34682.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae INV200]
 gi|302597474|gb|EFL64568.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae BS455]
 gi|302636154|gb|EFL66650.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638301|gb|EFL68770.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP-BS293]
 gi|302640522|gb|EFL70931.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS458]
 gi|302642869|gb|EFL73174.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS457]
 gi|302645227|gb|EFL75463.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS397]
 gi|306409371|gb|ADM84798.1| Ribonucleotide reductase, beta subunit [Streptococcus pneumoniae
           AP200]
 gi|306484287|gb|ADM91156.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae 670-6B]
 gi|332074795|gb|EGI85267.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA41301]
 gi|332075112|gb|EGI85583.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA17545]
          Length = 320

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295


>gi|23500072|ref|NP_699512.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           1330]
 gi|62317763|ref|YP_223616.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 1 str. 9-941]
 gi|83269749|ref|YP_419040.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis biovar Abortus 2308]
 gi|148558197|ref|YP_001257348.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ovis
           ATCC 25840]
 gi|161620390|ref|YP_001594276.1| ribonucleotide-diphosphate reductase subunit beta [Brucella canis
           ATCC 23365]
 gi|189023015|ref|YP_001932756.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           S19]
 gi|254691263|ref|ZP_05154517.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 6 str. 870]
 gi|254695435|ref|ZP_05157263.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 3 str. Tulya]
 gi|254699051|ref|ZP_05160879.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|254699599|ref|ZP_05161427.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 5 str. 513]
 gi|254706144|ref|ZP_05167972.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M163/99/10]
 gi|254711557|ref|ZP_05173368.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis B2/94]
 gi|254712154|ref|ZP_05173965.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M644/93/1]
 gi|254715225|ref|ZP_05177036.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M13/05/1]
 gi|254720036|ref|ZP_05181847.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           83/13]
 gi|254732497|ref|ZP_05191075.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 4 str. 292]
 gi|256029807|ref|ZP_05443421.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M292/94/1]
 gi|256059454|ref|ZP_05449656.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           neotomae 5K33]
 gi|256157977|ref|ZP_05455895.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M490/95/1]
 gi|256253064|ref|ZP_05458600.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           B1/94]
 gi|256256449|ref|ZP_05461985.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 9 str. C68]
 gi|260167086|ref|ZP_05753897.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           F5/99]
 gi|260544998|ref|ZP_05820819.1| ribonucleotide reductase [Brucella abortus NCTC 8038]
 gi|260568371|ref|ZP_05838840.1| ribonucleotide reductase [Brucella suis bv. 4 str. 40]
 gi|260756870|ref|ZP_05869218.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 6 str. 870]
 gi|260760301|ref|ZP_05872649.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 4 str. 292]
 gi|260763541|ref|ZP_05875873.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260882684|ref|ZP_05894298.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 9 str. C68]
 gi|261215815|ref|ZP_05930096.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 3 str. Tulya]
 gi|261216944|ref|ZP_05931225.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M13/05/1]
 gi|261220160|ref|ZP_05934441.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           B1/94]
 gi|261313587|ref|ZP_05952784.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M163/99/10]
 gi|261319174|ref|ZP_05958371.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis B2/94]
 gi|261319814|ref|ZP_05959011.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M644/93/1]
 gi|261323425|ref|ZP_05962622.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           neotomae 5K33]
 gi|261750056|ref|ZP_05993765.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 5 str. 513]
 gi|261756480|ref|ZP_06000189.1| ribonucleotide reductase [Brucella sp. F5/99]
 gi|265985045|ref|ZP_06097780.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           83/13]
 gi|265986823|ref|ZP_06099380.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M292/94/1]
 gi|265996493|ref|ZP_06109050.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M490/95/1]
 gi|297249809|ref|ZP_06933510.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella
           abortus bv. 5 str. B3196]
 gi|306839412|ref|ZP_07472226.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. NF
           2653]
 gi|306845616|ref|ZP_07478185.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           BO1]
 gi|23463663|gb|AAN33517.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella suis
           1330]
 gi|62197956|gb|AAX76255.1| NrdF, ribonucleoside-diphosphate reductase, beta subunit [Brucella
           abortus bv. 1 str. 9-941]
 gi|82940023|emb|CAJ13054.1| Ribonucleotide reductase [Brucella melitensis biovar Abortus 2308]
 gi|148369482|gb|ABQ62354.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella ovis
           ATCC 25840]
 gi|161337201|gb|ABX63505.1| Ribonucleoside-diphosphate reductase [Brucella canis ATCC 23365]
 gi|189021589|gb|ACD74310.1| Ribonucleotide reductase [Brucella abortus S19]
 gi|260098269|gb|EEW82143.1| ribonucleotide reductase [Brucella abortus NCTC 8038]
 gi|260155036|gb|EEW90117.1| ribonucleotide reductase [Brucella suis bv. 4 str. 40]
 gi|260670619|gb|EEX57559.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 4 str. 292]
 gi|260673962|gb|EEX60783.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260676978|gb|EEX63799.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 6 str. 870]
 gi|260872212|gb|EEX79281.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 9 str. C68]
 gi|260917422|gb|EEX84283.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 3 str. Tulya]
 gi|260918744|gb|EEX85397.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           B1/94]
 gi|260922033|gb|EEX88601.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M13/05/1]
 gi|261292504|gb|EEX96000.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M644/93/1]
 gi|261298397|gb|EEY01894.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis B2/94]
 gi|261299405|gb|EEY02902.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           neotomae 5K33]
 gi|261302613|gb|EEY06110.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M163/99/10]
 gi|261736464|gb|EEY24460.1| ribonucleotide reductase [Brucella sp. F5/99]
 gi|261739809|gb|EEY27735.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 5 str. 513]
 gi|262550790|gb|EEZ06951.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M490/95/1]
 gi|264659020|gb|EEZ29281.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M292/94/1]
 gi|264663637|gb|EEZ33898.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           83/13]
 gi|297173678|gb|EFH33042.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella
           abortus bv. 5 str. B3196]
 gi|306273937|gb|EFM55764.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           BO1]
 gi|306405535|gb|EFM61800.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. NF
           2653]
          Length = 329

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  E 
Sbjct: 191 TADLIRLIIRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEA 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 250 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 305

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 306 FFSGSGSSYVIGKAV 320


>gi|228475302|ref|ZP_04060026.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis SK119]
 gi|228270678|gb|EEK12092.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis SK119]
          Length = 322

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  ++   +L E    E++Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEELYKNEVSYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           H       +GL       Y+Q+  N+    +G EP F+  E NP   +   +D   +  +
Sbjct: 241 HMLYDD--IGLT-EDVLNYVQYNGNKALSNLGFEPYFEEKEFNPI--IENALDTSTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|227542806|ref|ZP_03972855.1| ribonucleoside-diphosphate reductase [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227181432|gb|EEI62404.1| ribonucleoside-diphosphate reductase [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 335

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 55/141 (39%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +++         E +  +  +  +    E  Y  + 
Sbjct: 197 TADIIRLIIRDEAVHGYYIGYKYQRMQDNLSQAEKDELKDYTYDLTLDLYDNEEQYTEDM 256

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKN--FF 120
                +G      ++++++ AN+  + +G E L+   E    P +   +    ++N  FF
Sbjct: 257 Y--DELGWT-EDVKRFLRYNANKALNNLGYEALYPSDETRVSPAILSALSPNADENHDFF 313

Query: 121 ETRVTEYQQGAG-----LKWD 136
               + Y  GA        WD
Sbjct: 314 SGSGSSYVIGAVENTEDADWD 334


>gi|227488208|ref|ZP_03918524.1| ribonucleoside-diphosphate reductase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227091778|gb|EEI27090.1| ribonucleoside-diphosphate reductase [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 335

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 55/141 (39%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +++         E +  +  +  +    E  Y  + 
Sbjct: 197 TADIIRLIIRDEAVHGYYIGYKYQRMQDNLSQAEKDELKDYTYDLTLDLYDNEEQYTEDM 256

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKN--FF 120
                +G      ++++++ AN+  + +G E L+   E    P +   +    ++N  FF
Sbjct: 257 Y--DELGWT-EDVKRFLRYNANKALNNLGYEALYPSDETRVSPAILSALSPNADENHDFF 313

Query: 121 ETRVTEYQQGAG-----LKWD 136
               + Y  GA        WD
Sbjct: 314 SGSGSSYVIGAVENTEDADWD 334


>gi|322391986|ref|ZP_08065450.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           peroris ATCC 700780]
 gi|321145212|gb|EFX40609.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           peroris ATCC 700780]
          Length = 320

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ +     +L+     E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPQDEQEKLKDWMYDLLYTLYENEEGYTESL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DTVGWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|314936969|ref|ZP_07844316.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis subsp. hominis C80]
 gi|313655588|gb|EFS19333.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis subsp. hominis C80]
          Length = 322

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  ++   +L E    E++Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEELYKNEVSYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           H       +GL       Y+Q+  N+    +G EP F+  E NP   +   +D   +  +
Sbjct: 241 HMLYDD--IGLT-EDVLNYVQYNGNKALSNLGFEPYFEEKEFNPI--IENALDTSTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|213693323|ref|YP_002323909.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213524784|gb|ACJ53531.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320459505|dbj|BAJ70126.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 330

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       + Q  +  +L+E    E+ Y    
Sbjct: 192 TADVIRLIIRDEAVHGYYIGYKYQKGIAQLGDAERLDLQDYTYDLLNELYDNEVEYTQSL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKN 118
             +  VGL     E+++++  N+    +G   LF       NP     +S   D     +
Sbjct: 252 YDR--VGLT-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPAILASLSPNADENH--D 306

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G   + D
Sbjct: 307 FFSGSGSSYVMGKAEETD 324


>gi|206968346|ref|ZP_03229302.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH1134]
 gi|228951834|ref|ZP_04113932.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|229069005|ref|ZP_04202298.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           F65185]
 gi|206737266|gb|EDZ54413.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH1134]
 gi|228714117|gb|EEL65999.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus cereus
           F65185]
 gi|228807757|gb|EEM54278.1| Ribonucleoside-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 133

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%)

Query: 12  MRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL 71
           ++DES+H  F   +  QI  E      +E Q++++ +L E   +E+AY  E      +GL
Sbjct: 3   VKDESIHGVFVGILAQQIFAELSVEEQQEVQKETQELLMELYEIEMAYTEEIY--TSIGL 60

Query: 72  NAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEKNFFETRVTEYQQG 130
                 +++++ AN+    +GLEP F+  E NP   ++ +    K  +FF  +   Y + 
Sbjct: 61  -VEDVNRFVRYNANKGLMNLGLEPKFEEEEINPIV-LNGLRTDTKNHDFFSVKGNGYVKA 118

Query: 131 AGLK 134
             ++
Sbjct: 119 TNVE 122


>gi|116511803|ref|YP_809019.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. cremoris SK11]
 gi|125624347|ref|YP_001032830.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|116107457|gb|ABJ72597.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactococcus lactis subsp. cremoris SK11]
 gi|124493155|emb|CAL98119.1| ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|300071131|gb|ADJ60531.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 325

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 7/123 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  AE  + I+RDES+H  +          E       EF+     +L++    E  Y+
Sbjct: 185 MINSAEIIKLIIRDESVHGTYIGYKFQLGFNELSEDEQSEFRDWMYELLYKLYENEENYS 244

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
           H    K  VG        ++++ AN+    +G +PLF  T    NP   M+ +       
Sbjct: 245 HLLYDK--VGWT-DEVLTFLRYNANKALMNLGQDPLFPDTAADVNPVV-MNGISTSSSNH 300

Query: 118 NFF 120
           +FF
Sbjct: 301 DFF 303


>gi|15672956|ref|NP_267130.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. lactis Il1403]
 gi|12723917|gb|AAK05072.1|AE006332_1 ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis
           subsp. lactis Il1403]
 gi|326406518|gb|ADZ63589.1| ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis
           subsp. lactis CV56]
          Length = 325

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 7/123 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  AE  + I+RDES+H  +          E       EF+     +L++    E  Y+
Sbjct: 185 MINSAEIIKLIIRDESVHGTYIGYKFQLGFNELSEDEQGEFRDWMYELLYQLYENEEKYS 244

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
           H    K  VG        ++++ AN+    +G +PLF  T    NP   M+ +       
Sbjct: 245 HLLYDK--VGWT-DEVLTFLRYNANKALMNLGQDPLFPDTAADVNPVV-MNGISTSSSNH 300

Query: 118 NFF 120
           +FF
Sbjct: 301 DFF 303


>gi|294853320|ref|ZP_06793992.1| ribonucleoside-diphosphate reductase [Brucella sp. NVSL 07-0026]
 gi|294818975|gb|EFG35975.1| ribonucleoside-diphosphate reductase [Brucella sp. NVSL 07-0026]
          Length = 329

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  E 
Sbjct: 191 TADLIRLIIRDEAVHGYYIGYKFQRALEVLFEEKRQEIKDFAFELLLELYDNEVRY-TEA 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 250 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 305

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 306 FFSGSGSSYVIGKAV 320


>gi|221231890|ref|YP_002511042.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae ATCC 700669]
 gi|220674350|emb|CAR68896.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae ATCC 700669]
          Length = 320

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIV-MNGISTGTSNHDFF 295


>gi|312864696|ref|ZP_07724927.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
 gi|311099823|gb|EFQ58036.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
          Length = 319

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E       EF+     +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELSEEEQSEFRDWMYDLLYQLYENEELYTKTL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 240 Y--DEVGWTEEVM-TFLRYNANKALMNLGQDPLFPDTADDVNPIV-MNGISTGTSNHDFF 295


>gi|203288309|ref|YP_002223359.1| ribonucleoside-diphosphate reductase, beta subunit [Borrelia
           recurrentis A1]
 gi|203288575|ref|YP_002223482.1| ribonucleoside-diphosphate reductase beta subunit [Borrelia
           duttonii Ly]
 gi|201084282|gb|ACH93870.1| ribonucleoside-diphosphate reductase beta subunit [Borrelia
           duttonii Ly]
 gi|201085529|gb|ACH95102.1| ribonucleoside-diphosphate reductase, beta subunit [Borrelia
           recurrentis A1]
          Length = 321

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 15/136 (11%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTM---LHEATLLEI 57
           MV   E    I+RDES+H  F   +    + E   +  KE +   + M   L +   LE 
Sbjct: 181 MVNSGEIINLILRDESVHGVFVGLL---AQEEFDKMTMKEQELAYKEMLLILEKLYSLER 237

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLK 114
            Y  E      VGL +   + ++++ A++    +G +  F   +   NP   +   +   
Sbjct: 238 EYTKELYSC--VGLESA-VDVFVRYNADKALMNLGFDTKFNIKDTDVNPL--VLNGLRTD 292

Query: 115 KEK-NFFETRVTEYQQ 129
            +  +FF T+   Y +
Sbjct: 293 TKTHDFFSTKGNGYIK 308


>gi|254702722|ref|ZP_05164550.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 3 str. 686]
          Length = 335

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  E 
Sbjct: 197 TADLIRLIIRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEA 255

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 256 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 311

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 312 FFSGSGSSYVIGKAV 326


>gi|295397900|ref|ZP_06807962.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
 gi|294973880|gb|EFG49645.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
          Length = 323

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 11/104 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           +  +AE  + I+RDES+H  +         NQ+  E       + Q  + ++L E    E
Sbjct: 181 LPNVAEIIKLILRDESVHGTYIGYKFQIAFNQLSKEEQE----DMQNWAFSLLFELYENE 236

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT 100
             Y+        +G      + ++++ AN+    +G +PLF  T
Sbjct: 237 AKYSEYIYDD--LGWT-EDVKIFLRYNANKALQNLGFDPLFPDT 277


>gi|322692090|ref|YP_004221660.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. longum JCM 1217]
 gi|320456946|dbj|BAJ67568.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. longum JCM 1217]
          Length = 330

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       + Q  +  +L+E    E+ Y    
Sbjct: 192 TADVIRLIIRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
             +  VGL     E+++++  N+    +G   LF       NP   +   +    ++N  
Sbjct: 252 YDR--VGLT-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPA--ILAALSPNADENHD 306

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G   + D
Sbjct: 307 FFSGSGSSYVMGKAEETD 324


>gi|321309596|ref|YP_004191925.1| ribonucleotide reductase subunit beta [Mycoplasma haemofelis str.
           Langford 1]
 gi|319801440|emb|CBY92086.1| ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Mycoplasma haemofelis str. Langford 1]
          Length = 327

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 7/137 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+   E    I+RDE++H  +   +  +I         KE ++K   +L E    EI Y 
Sbjct: 186 MINSGEIINLIIRDEAIHGLYIGVLSMEIFKTFNEEKQKEMKEKVICLLRELMANEIKYT 245

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
                K  +GL      +++++ AN+    +G E  +  T+   NP  + + +    K  
Sbjct: 246 ELIYSK--IGL-VEDVNRFLEYNANKALQNLGFENEYSTTDKDINPIVF-NGLKTTTKSH 301

Query: 118 NFFETRVTEYQQGAGLK 134
           +FF T+   Y +   ++
Sbjct: 302 DFFSTKGNGYIKTTKVE 318


>gi|17989274|ref|NP_541907.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 1 str. 16M]
 gi|17985137|gb|AAL54171.1| ribonucleoside-diphosphate reductase beta chain [Brucella
           melitensis bv. 1 str. 16M]
          Length = 335

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  E 
Sbjct: 197 TADLIRLIIRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEA 255

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 256 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 311

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 312 FFSGSGSSYVIGKAV 326


>gi|23465253|ref|NP_695856.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum NCC2705]
 gi|23325884|gb|AAN24492.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium
           longum NCC2705]
          Length = 330

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       + Q  +  +L+E    E+ Y    
Sbjct: 192 TADVIRLIIRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                VGL     E+++++  N+    +G   LF       NP   +   +    ++N  
Sbjct: 252 YDC--VGLT-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPA--ILAALSPNADENHD 306

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G   + D
Sbjct: 307 FFSGSGSSYVMGKAEETD 324


>gi|239622882|ref|ZP_04665913.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|312133660|ref|YP_004000999.1| nrdf [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482331|ref|ZP_07941351.1| ribonucleotide reductase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690138|ref|YP_004209872.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum subsp. infantis 157F]
 gi|239514879|gb|EEQ54746.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|291517762|emb|CBK71378.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bifidobacterium longum subsp. longum F8]
 gi|311772922|gb|ADQ02410.1| NrdF [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916211|gb|EFV37613.1| ribonucleotide reductase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320461474|dbj|BAJ72094.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. infantis 157F]
          Length = 330

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       + Q  +  +L+E    E+ Y    
Sbjct: 192 TADVIRLIIRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
             +  VGL     E+++++  N+    +G   LF       NP   +   +    ++N  
Sbjct: 252 YDR--VGLT-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPA--ILAALSPNADENHD 306

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G   + D
Sbjct: 307 FFSGSGSSYVMGKAEETD 324


>gi|227547058|ref|ZP_03977107.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum subsp. infantis ATCC 55813]
 gi|227212475|gb|EEI80364.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum subsp. infantis ATCC 55813]
          Length = 330

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       + Q  +  +L+E    E+ Y    
Sbjct: 192 TADVIRLIIRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
             +  VGL     E+++++  N+    +G   LF       NP   +   +    ++N  
Sbjct: 252 YDR--VGLT-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPA--ILAALSPNADENHD 306

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G   + D
Sbjct: 307 FFSGSGSSYVMGKAEETD 324


>gi|315223183|ref|ZP_07865044.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           anginosus F0211]
 gi|315187615|gb|EFU21369.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           anginosus F0211]
          Length = 319

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    + F++    +L+     E  Y  ET
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQETFREWMYDLLYTLYENEEGY-TET 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G + LF  T    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDSLFPDTADDVNPIV-MNGISTGTSNHDFF 295


>gi|260904342|ref|ZP_05912664.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
           linens BL2]
          Length = 326

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 12/140 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  ++ E    E+AY H+ 
Sbjct: 188 TADLIRLIIRDEAVHGYYIGYKYQKGLESQSEERKQELKDYTMNLMFELYENEVAYTHDL 247

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
                VGL A  C+ ++ + AN+    +G E +F       NP   +   +    ++N  
Sbjct: 248 Y--DSVGL-AEDCKMFLHYNANKALMNLGYEAMFPKEVTEVNPA--ILAALSPNSDENHD 302

Query: 119 FFETRVTEYQ--QGAGLKWD 136
           FF    + Y   +    + D
Sbjct: 303 FFSGSGSSYVIGKAENTEDD 322


>gi|225870271|ref|YP_002746218.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus equi
           subsp. equi 4047]
 gi|225699675|emb|CAW93380.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus equi subsp. equi 4047]
          Length = 319

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E      +  +     +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELSESEQESLRDWMYDLLYQLYENEEQYTKTL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 240 Y--DEVGWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|156340310|ref|XP_001620415.1| hypothetical protein NEMVEDRAFT_v1g148226 [Nematostella vectensis]
 gi|156205304|gb|EDO28315.1| predicted protein [Nematostella vectensis]
          Length = 224

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 6/45 (13%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKS 45
           M G+    + I RDE +H +F + +       N HL  K  +++ 
Sbjct: 186 MPGLTFSNELISRDEGVHCDFAVHI------HNHHLINKVPKERI 224


>gi|225628773|ref|ZP_03786807.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           str. Cudo]
 gi|237817303|ref|ZP_04596295.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           str. 2308 A]
 gi|225616619|gb|EEH13667.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           str. Cudo]
 gi|237788116|gb|EEP62332.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           str. 2308 A]
          Length = 335

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  E 
Sbjct: 197 TADLIRLIIRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEA 255

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 256 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 311

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 312 FFSGSGSSYVIGKAV 326


>gi|297570727|ref|YP_003696501.1| ribonucleoside-diphosphate reductase [Arcanobacterium haemolyticum
           DSM 20595]
 gi|296931074|gb|ADH91882.1| Ribonucleoside-diphosphate reductase [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 324

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 52/143 (36%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q           E    + ++L +    E  Y    
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKYQQAVKRASAERQAELMDYTYSLLEDLYENEEGYTESL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
                +GL     + ++++ AN+    +G E LF   +   NP   +   +    ++N  
Sbjct: 246 Y--DEMGLT-EDVKMFLRYNANKALMNLGYEALFPADQTAVNPA--ILAALSPNADENHD 300

Query: 119 FFETRVTEYQQGAG-----LKWD 136
           FF    + Y  G         WD
Sbjct: 301 FFSGSGSSYVIGTAEATEDEDWD 323


>gi|225868773|ref|YP_002744721.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus equi
           subsp. zooepidemicus]
 gi|225702049|emb|CAW99658.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus equi subsp. zooepidemicus]
          Length = 319

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E      +  +     +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELSESEQESLRDWMYDLLYQLYENEEQYTKTL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 240 Y--DEVGWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|322374376|ref|ZP_08048890.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C300]
 gi|321279876|gb|EFX56915.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C300]
          Length = 320

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P     + ++    +L+     E  Y  E+
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQGKLKEWMYDLLYTLYENEEGY-TES 238

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
           +  G  G      + ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 239 LYDGV-GWT-EEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIV-MNGISTGTSNHDFF 295


>gi|261343568|ref|ZP_05971213.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
 gi|282568717|gb|EFB74252.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
          Length = 323

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E ++ + ++L +    EI Y  E 
Sbjct: 185 TADLIRLIIRDEAIHGYYIGYKFQKSLATYNEQQQNEIKEFTFSLLFDLYENEIKYTQEL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
                VG +    + ++ + AN+    +G E LF         +S  I      D  +  
Sbjct: 245 Y--DSVGWS-EDVKSFLHYNANKALMNLGYEALFPEA---ITQVSPEILSALSPDANENH 298

Query: 118 NFFETRVTEYQ--QGAGLKWD 136
           +FF    + Y   +    + D
Sbjct: 299 DFFSGSGSSYVIGKAVSTEDD 319


>gi|269865568|ref|XP_002651969.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063399|gb|EED42087.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 251

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIE 32
           M G+    + I RDE LH +F   +   I  +
Sbjct: 207 MPGLTFSNELISRDEGLHTDFACLLHKYINNK 238


>gi|145296522|ref|YP_001139343.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           glutamicum R]
 gi|140846442|dbj|BAF55441.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 334

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 12/140 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E ++ +  +L++    E  Y+ + 
Sbjct: 196 TADVIRLIIRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDL 255

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKN 118
                +G      ++++++ AN+  + +G E LF   E     N    +S   D     +
Sbjct: 256 YDD--LGWT-EDVKRFLRYNANKALNNLGYEGLFPADETKVSPNILSALSPNADENH--D 310

Query: 119 FFETRVTEYQ--QGAGLKWD 136
           FF    + Y   +    + D
Sbjct: 311 FFSGSGSSYVIGKAENTEDD 330


>gi|119387083|ref|YP_918138.1| ribonucleotide-diphosphate reductase subunit beta [Paracoccus
           denitrificans PD1222]
 gi|119377678|gb|ABL72442.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Paracoccus denitrificans PD1222]
          Length = 329

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 14/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +             +  + +++ +   +E  Y  E 
Sbjct: 192 TADLIRLIIRDEAVHGYYIGYKYQRGLERLGEAERAALKDFAFSLIFDLYDIEAKYTAEL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NF 119
                +GL     + ++ + AN+    +G E LF       NP   +   +    E  +F
Sbjct: 252 Y--DGIGLT-EDVKSFLHYNANKALQNLGYEALFPPQACEVNPA--ILAALSPDSENHDF 306

Query: 120 FETRVTEYQQGAGL-----KWD 136
           F    + Y  G  +      WD
Sbjct: 307 FSGSGSSYVIGKAVATEDEDWD 328


>gi|85726187|gb|ABC79616.1| ribonucleotide reductase beta subunit [Borrelia hermsii DAH]
          Length = 321

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 54/133 (40%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV   E    I+RDES+H  F   +  +   +         Q+++  +L     LE AY 
Sbjct: 181 MVNSGEIINLILRDESVHGVFVGLLAQEEFNKMTFKEQAFAQREATLILERLYYLESAYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
            +      +GL     + ++++ A++    +G +  F   +   NP   +   +    + 
Sbjct: 241 KDLY--SSIGLEGA-VDVFVRYNADKALMNLGFDSAFNIRDIDVNPL--VLNGLRTNTKT 295

Query: 118 -NFFETRVTEYQQ 129
            +FF T+   Y +
Sbjct: 296 HDFFSTKGNGYIK 308


>gi|268590425|ref|ZP_06124646.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
 gi|291314339|gb|EFE54792.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
          Length = 323

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 23/147 (15%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      KE +  S ++L +    E+ Y  E 
Sbjct: 185 TADLIRLIIRDEAIHGYYIGYKFQKSLAQYDENTQKEIKDFSFSLLFDLYENEVKYTQEL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLK 114
                VG +    ++++ + AN+    +G E LF  T      +++V          D  
Sbjct: 245 Y--DTVGWS-EDVKKFLHYNANKALMNLGYEALFPDT------VTDVSAAILSALSPDAN 295

Query: 115 KEKNFFETRVTEYQQGAGLK-----WD 136
           +  +FF    + Y  G  +      WD
Sbjct: 296 ENHDFFSGSGSSYIIGKAVSTEDDDWD 322


>gi|325963521|ref|YP_004241427.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469608|gb|ADX73293.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 324

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y H+ 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQRGLEAVSPERRQEIKDYTFELLFELYENEVQYTHDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VGL A   ++++ + AN+    +G E +F  +    NP     +S   D     +
Sbjct: 246 Y--DGVGL-AEDVKKFLHYNANKALMNLGYEAMFPASVTDVNPAILSALSPNADENH--D 300

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 301 FFSGSGSSYVIGKAVNTEDEDWD 323


>gi|256111767|ref|ZP_05452742.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 3 str. Ether]
          Length = 190

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  E 
Sbjct: 52  TADLIRLIIRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEA 110

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 111 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 166

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 167 FFSGSGSSYVIGKAV 181


>gi|163867489|ref|YP_001608688.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           tribocorum CIP 105476]
 gi|161017135|emb|CAK00693.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           tribocorum CIP 105476]
          Length = 324

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 12/140 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +      +E +  +  +L +   +E  Y  + 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQLGYAKLEEAKRQEVKDFAFNLLFDLYNIECKYTEDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                +GL     + ++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 246 Y--DSLGLT-EDVKIFLHYNANKALMNLGFEALFPPEVCHVNPAILASLSPNSDENH--D 300

Query: 119 FFETRVTEYQ--QGAGLKWD 136
           FF    + Y   +      D
Sbjct: 301 FFSGAGSSYVIGKAVATTDD 320


>gi|19553723|ref|NP_601725.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           glutamicum ATCC 13032]
 gi|62391364|ref|YP_226766.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           glutamicum ATCC 13032]
 gi|15430572|dbj|BAB64405.1| ribonucleoside diphosphate reductase [Corynebacterium glutamicum]
 gi|21325297|dbj|BAB99918.1| Ribonucleotide reductase beta subunit [Corynebacterium glutamicum
           ATCC 13032]
 gi|41326705|emb|CAF21187.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 2 BETA CHAIN [Corynebacterium
           glutamicum ATCC 13032]
          Length = 334

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 12/140 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E ++ +  +L++    E  Y+ + 
Sbjct: 196 TADVIRLIIRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDL 255

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKN 118
                +G      ++++++ AN+  + +G E LF   E     N    +S   D     +
Sbjct: 256 YDD--LGWT-EDVKRFLRYNANKALNNLGYEGLFPADETKVSPNILSALSPNADENH--D 310

Query: 119 FFETRVTEYQ--QGAGLKWD 136
           FF    + Y   +    + D
Sbjct: 311 FFSGSGSSYVIGKAENTEDD 330


>gi|260579705|ref|ZP_05847564.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium jeikeium ATCC 43734]
 gi|258602135|gb|EEW15453.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium jeikeium ATCC 43734]
          Length = 331

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDES+H  +      +          +E ++ +  +L E    E  Y  + 
Sbjct: 193 TADIIRLIIRDESVHGYYIGYKYQRALENETPERQEELKEHTFDLLLELYDNEAQYTEDL 252

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 253 Y--DELGWT-EDVKRFLRYNANKALNNLGYEGLFPADE 287


>gi|57014145|gb|AAT68710.2| ribonucleoside reductase beta subunit [Borrelia hermsii]
          Length = 321

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 54/133 (40%), Gaps = 9/133 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV   E    I+RDES+H  F   +  +   +         Q+++  +L     LE AY 
Sbjct: 181 MVNSGEIINLILRDESVHGVFVGLLAQEEFNKMTFKEQAFAQREATLILERLYYLESAYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
            +      +GL     + ++++ A++    +G +  F   +   NP   +   +    + 
Sbjct: 241 KDLY--SSIGLEGA-VDVFVRYNADKALMNLGFDSAFNIRDIDVNPL--VLNGLRTNTKT 295

Query: 118 -NFFETRVTEYQQ 129
            +FF T+   Y +
Sbjct: 296 HDFFSTKGNGYIK 308


>gi|313890786|ref|ZP_07824411.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120887|gb|EFR44001.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 319

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E      + F++    +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELNEEEQESFREWMYDLLYQLYENEENYTKTL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 240 Y--DQVGWTDEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|68535550|ref|YP_250255.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           jeikeium K411]
 gi|68263149|emb|CAI36637.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           jeikeium K411]
          Length = 331

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDES+H  +      +          +E ++ +  +L E    E  Y  + 
Sbjct: 193 TADIIRLIIRDESVHGYYIGYKYQRALENETPERQEELKEHTFDLLLELYDNEAQYTEDL 252

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 253 Y--DELGWT-EDVKRFLRYNANKALNNLGYEGLFPADE 287


>gi|300932708|ref|ZP_07147964.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           resistens DSM 45100]
          Length = 331

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDES+H  +      +   +      +E +  +  +L E    E  Y  + 
Sbjct: 193 TADIIRLIIRDESVHGYYIGYKYQRAMEQESAARQEELKDHTFDLLLELYDNEAQYTEDL 252

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 253 Y--DELGWT-EDVKRFLRYNANKALNNLGYEGLFPADE 287


>gi|312137650|ref|YP_004004986.1| ribonucleoside-diphosphate reductase beta subunit nrdf [Rhodococcus
           equi 103S]
 gi|311886989|emb|CBH46298.1| ribonucleoside-diphosphate reductase beta subunit NrdF [Rhodococcus
           equi 103S]
          Length = 322

 Score = 55.4 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 10/132 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +             ++ +  +L      E+AYA + 
Sbjct: 184 TADLIRLIIRDEAVHGYYIGYKCRKALERLDASARDAHRRYTYDLLETLYANEVAYAADL 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKN 118
                VG  A     YM+F AN+    +G EP+F  +E   NP   +   +D    +  +
Sbjct: 244 Y--DEVGWTAEVVS-YMRFNANKALANLGYEPMFPVSECQVNPA--ILSALDPGAGENHD 298

Query: 119 FFETRVTEYQQG 130
           FF    + Y  G
Sbjct: 299 FFSGSGSAYVIG 310


>gi|265993236|ref|ZP_06105793.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 3 str. Ether]
 gi|262764106|gb|EEZ10138.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 3 str. Ether]
          Length = 189

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  E 
Sbjct: 51  TADLIRLIIRDEAVHGYYIGYKFQRALEVLSEEKRQEIKDFAFELLLELYDNEVRY-TEA 109

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 110 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 165

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 166 FFSGSGSSYVIGKAV 180


>gi|227833933|ref|YP_002835640.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184936|ref|ZP_06044357.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454949|gb|ACP33702.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 329

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 58/143 (40%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   +      +E +  +  +L++    EI Y  + 
Sbjct: 191 TADIIRLIIRDEAVHGYYIGYKFQQGYQKLSEPEQEEMKGYAFDLLYDLYENEIDYTEDL 250

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                +G      ++++++ AN+  + +G E LF   E   +P     +S   D     +
Sbjct: 251 Y--DELGWT-EDVKRFLRYNANKALNNLGFEGLFPADETRVSPAILSSLSPNADENH--D 305

Query: 119 FFETRVTEYQQGAGLK-----WD 136
           FF    + Y  G   +     WD
Sbjct: 306 FFSGSGSSYVIGKAEETTDDDWD 328


>gi|45259565|dbj|BAD12265.1| p53-inducible ribonucleotide reductase small subunit 2 short form
           beta [Homo sapiens]
          Length = 66

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 100 TENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGL 133
            ENPF +M E I L+ + NFFE RV+EYQ+ A +
Sbjct: 20  AENPFDFM-ENISLEGKTNFFEKRVSEYQRFAVM 52


>gi|70727160|ref|YP_254076.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           haemolyticus JCSC1435]
 gi|68447886|dbj|BAE05470.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           haemolyticus JCSC1435]
          Length = 322

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  ++   +L +    E++Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSENEKQKADKEMYKLLEDLYANEVSYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           H       +GL+      Y+Q+  N+    +G EP F+  E NP   +   +D   +  +
Sbjct: 241 HMLYDD--IGLS-EDVLNYVQYNGNKALSNLGFEPYFEEKEFNPI--IENALDTTTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|239833484|ref|ZP_04681812.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum
           intermedium LMG 3301]
 gi|239821547|gb|EEQ93116.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum
           intermedium LMG 3301]
          Length = 328

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E+ Y  E 
Sbjct: 190 TADLIRLIIRDEAVHGYYIGYKFQRGLERLNGEQKQEIKDFAFELLLELYDNEVRY-TEA 248

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 249 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPADACKVNPAILSALSPNADENH--D 304

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 305 FFSGSGSSYVIGKAV 319


>gi|330718304|ref|ZP_08312904.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           fallax KCTC 3537]
          Length = 326

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 3/98 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+ +AE  + I+RDES+H  +          +       E Q     +L E    E  + 
Sbjct: 181 MLNVAEIIKLIIRDESVHGTYIGYKFQIGFNQLSEDEQSELQSWMYDLLFELYENEEKFT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 98
           HE      +G        ++++ AN+    +G EP+F 
Sbjct: 241 HELY--DEIGWTDSVM-TFLRYNANKALMNLGQEPMFP 275


>gi|319441868|ref|ZP_07991024.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           variabile DSM 44702]
          Length = 332

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 55/141 (39%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  ++ +    E  Y  + 
Sbjct: 194 TADVIRLIIRDEAVHGYYIGYKYQRALEHETEARRQELKDHTFELVFDLYDNECQYTEDL 253

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKN--FF 120
                +G      ++++++ AN+  + +G E LF   E    P +   ++   ++N  FF
Sbjct: 254 YDD--LGWT-EDVKRFLRYNANKALNNLGYEGLFPVDETRVSPSIISALNPGGDENHDFF 310

Query: 121 ETRVTEYQQGAGL-----KWD 136
               + Y  G         WD
Sbjct: 311 SGSGSSYVIGKAENTVDDDWD 331


>gi|311113720|ref|YP_003984942.1| ribonucleotide-diphosphate reductase subunit beta [Rothia
           dentocariosa ATCC 17931]
 gi|310945214|gb|ADP41508.1| ribonucleotide-diphosphate reductase subunit beta [Rothia
           dentocariosa ATCC 17931]
          Length = 325

 Score = 55.4 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       E ++ +  +L+E    E++Y H  
Sbjct: 187 TADLIRLIIRDEAVHGYYIGYKFQRGLAKESPERQAELKEYTFNLLYELYENEVSYTHSL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FF 120
                VG +    ++++ + AN+    +G E +F  +  N  P +   +    ++N  FF
Sbjct: 247 Y--DGVGWS-EDVKKFLHYNANKALMNLGYEAMFPASVTNVSPAILSALSPNADENHDFF 303

Query: 121 ETRVTEYQQGAGL-----KWD 136
               + Y  G  +      WD
Sbjct: 304 SGSGSSYVIGKAVNTEDEDWD 324


>gi|27357032|gb|AAN86693.1| ribonucleotide reductase small subunit [Red sea bream iridovirus]
          Length = 48

 Score = 55.0 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 26/48 (54%)

Query: 36 LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI 83
          +  K  Q  +  ++ +A  +E A+  E +    +G+N+ S + Y+QF+
Sbjct: 1  MANKPCQDDAHEIISDAVDIETAFFREALKTPLLGMNSDSMKLYIQFV 48


>gi|195977892|ref|YP_002123136.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|195974597|gb|ACG62123.1| ribonucleotide reductase of class Ib (aerobic) beta subunit NrdF
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 319

 Score = 55.0 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E      +  +     +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELSDSEQESLRDWMYDLLYQLYENEEQYTKTL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 240 Y--DEVGWTEEVM-TFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 295


>gi|227833759|ref|YP_002835466.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184833|ref|ZP_06044254.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454775|gb|ACP33528.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 328

 Score = 55.0 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 10/134 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q           E Q K   +L +    E  Y  + 
Sbjct: 190 TADIIRLIIRDEAVHGYYIGYKYQQQVKHLDQAQQAELQSKVIDLLLDLMDNEEHYTRDL 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                +G        ++++ AN+  + +G + ++       NP     ++   D     +
Sbjct: 250 Y--DPLGWT-EDVLAFLRYNANKALNNLGYDGIYPQDMCRFNPGVMTSLNPGADENH--D 304

Query: 119 FFETRVTEYQQGAG 132
           FF    + Y  G  
Sbjct: 305 FFSGSGSSYVIGTA 318


>gi|257069608|ref|YP_003155863.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Brachybacterium faecium DSM 4810]
 gi|256560426|gb|ACU86273.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Brachybacterium faecium DSM 4810]
          Length = 322

 Score = 55.0 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       E +  + ++L E    E  Y  + 
Sbjct: 184 TADIIRLIIRDEAVHGYYIGYKYQKAVEKLSAERQAELKDYTFSLLMELYDNEEVYTEDI 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VG      + ++++ AN+    +G E LF       NP     +S   D     +
Sbjct: 244 Y--DPVGWT-EDVKVFLRYNANKALMNLGYEGLFPQEATQVNPAILASLSPNADENH--D 298

Query: 119 FFETRVTEYQQGAGLK-----WD 136
           FF    + Y  G  ++     WD
Sbjct: 299 FFSGSGSSYVMGKAVETEDDDWD 321


>gi|291455662|ref|ZP_06595052.1| ribonucleoside-diphosphate reductase, beta subunit [Bifidobacterium
           breve DSM 20213]
 gi|291382590|gb|EFE90108.1| ribonucleoside-diphosphate reductase, beta subunit [Bifidobacterium
           breve DSM 20213]
          Length = 330

 Score = 55.0 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       + Q  +  +L+E    E+ Y    
Sbjct: 192 TADVIRLIIRDEAVHGYYIGYKYQKGIAQLTDAERMDMQDYTYDLLNELYDNEVEYTQSL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
             +  VGL     E+++++  N+    +G   LF       NP   +   +    ++N  
Sbjct: 252 YDR--VGLT-EDVEKFLRYNGNKALMNLGYPALFPAEICDVNPA--ILAALSPNADENHD 306

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G   + D
Sbjct: 307 FFSGSGSSYVMGKAEETD 324


>gi|153010278|ref|YP_001371492.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum
           anthropi ATCC 49188]
 gi|151562166|gb|ABS15663.1| Ribonucleoside-diphosphate reductase [Ochrobactrum anthropi ATCC
           49188]
          Length = 328

 Score = 55.0 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +  +  +  +L E    E+ Y  E 
Sbjct: 190 TADLIRLIIRDEAVHGYYIGYKFQRGLERLNEEQKQAIKDFAFELLLELYDNEVRY-TEA 248

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
           +  G  GL     ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 249 LYDGV-GLT-EDVKKFLHYNANKALMNLGYEALFPAEACKVNPAILSALSPNADENH--D 304

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 305 FFSGSGSSYVIGKAV 319


>gi|258423381|ref|ZP_05686272.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9635]
 gi|257846442|gb|EEV70465.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9635]
          Length = 323

 Score = 54.6 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  Q+   +L++  L E +Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
                   +G+       Y+++  N+    +G EP F+  E NP   +   +D   +  +
Sbjct: 241 KMLYDD--LGIT-EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|319899230|ref|YP_004159323.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           clarridgeiae 73]
 gi|319403194|emb|CBI76753.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           clarridgeiae 73]
          Length = 324

 Score = 54.6 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 10/135 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +                 +E +  +  ML +   +E  Y    
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQLGFANLDKAKRQEIKDFAFNMLFDLYNIECKYTENL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                +GL     + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 246 Y--DSIGLT-EDVKVFLHYNANKALMNLGFEALFPPEVCRVNPA--ILAALSPNSDENHD 300

Query: 119 FFETRVTEYQQGAGL 133
           FF    + Y  G  +
Sbjct: 301 FFSGSGSSYVIGKAV 315


>gi|296111477|ref|YP_003621859.1| ribonucleotide-diphosphate reductase beta subunit [Leuconostoc
           kimchii IMSNU 11154]
 gi|295833009|gb|ADG40890.1| ribonucleotide-diphosphate reductase beta subunit [Leuconostoc
           kimchii IMSNU 11154]
          Length = 325

 Score = 54.6 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 3/98 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+ +AE  + I+RDES+H  +          + P    +  Q     +L+E    E  Y 
Sbjct: 182 MLNVAEIIKLIIRDESVHGTYIGYKFQIGFNKLPLAEQESLQSWMYDLLYELYENEEKYT 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 98
           HE      +G +      ++++ AN+    +G EP+F 
Sbjct: 242 HELYDD--LGWS-EQVLTFLRYNANKALMNLGQEPMFP 276


>gi|289809666|ref|ZP_06540295.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 74

 Score = 54.6 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 74  PSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMS-EVIDLKKEKNFFETRVTEY 127
               QY+++I N R   +GL+  F+   NP PW++  ++    +    E  V+ Y
Sbjct: 1   DILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSY 55


>gi|326692188|ref|ZP_08229193.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           argentinum KCTC 3773]
          Length = 325

 Score = 54.6 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+ +AE  + I+RDES+H  +          +       E Q     +L++    E  Y 
Sbjct: 183 MLNVAEIIKLIIRDESVHGTYIGYKFQIGFNQLSEDEQAELQAWMYDLLYDLYENEEKYT 242

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEK 117
           HE      +G        ++++ AN+    +G EP+F       NP   M+ +       
Sbjct: 243 HELYDD--LGW-YEQVMTFLRYNANKALMNLGQEPMFPDGAEDVNPVV-MNGLSTSTANH 298

Query: 118 NFF 120
           +FF
Sbjct: 299 DFF 301


>gi|254819781|ref|ZP_05224782.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           intracellulare ATCC 13950]
          Length = 322

 Score = 54.6 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   E         ++ +  +L+     EI YAH+ 
Sbjct: 184 TADIIRLIIRDEAVHGFYIGYKCQRGLAELSEPERSGHREYTYELLNALYTNEIDYAHDL 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKN 118
                +G        YM+F ANR    +G EP+F  ++   NP   +   +D    +  +
Sbjct: 244 Y--DGLGWT-DDVLPYMRFNANRALANLGYEPMFGPSDCRVNPA--VLSALDPGAGENHD 298

Query: 119 FFETRVTEYQQGA-----GLKWD 136
           FF    + Y  G+        WD
Sbjct: 299 FFSGSGSSYVIGSHQATEDADWD 321


>gi|116493227|ref|YP_804962.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
           pentosaceus ATCC 25745]
 gi|116103377|gb|ABJ68520.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Pediococcus pentosaceus ATCC 25745]
          Length = 317

 Score = 54.6 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E      +E +      L++    E  Y H  
Sbjct: 180 VAEIIKLILRDESVHGTYIGYKFQLGLKELGENEQQEIKDWMYNFLYDLYDNEEKYVHTL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        + ++ AN+    +G +PLF  TE   NP   M+ +       +FF
Sbjct: 240 Y--DQVGWT-DEVLTFTRYNANKALMNLGQDPLFPDTEADVNPIV-MNGISTGTSNHDFF 295


>gi|300173988|ref|YP_003773154.1| ribonucleoside-diphosphate reductase subunit beta [Leuconostoc
           gasicomitatum LMG 18811]
 gi|299888367|emb|CBL92335.1| ribonucleoside-diphosphate reductase, beta subunit [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 325

 Score = 54.6 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+ +AE  + I+RDES+H  +          + P     E Q     +L+E    E  Y 
Sbjct: 182 MLNVAEIIKLIIRDESVHGTYIGYKFQIGFNQLPAEEKSELQSWMYDLLYELYENEEKYT 241

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 98
           H+      +G        ++++ AN+    +G EP+F 
Sbjct: 242 HQLYDD--LGWT-EQVLTFLRYNANKALMNLGQEPMFP 276


>gi|270291189|ref|ZP_06197412.1| ribonucleoside-diphosphate reductase, beta subunit [Pediococcus
           acidilactici 7_4]
 gi|304385474|ref|ZP_07367819.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
           acidilactici DSM 20284]
 gi|270280585|gb|EFA26420.1| ribonucleoside-diphosphate reductase, beta subunit [Pediococcus
           acidilactici 7_4]
 gi|304328681|gb|EFL95902.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
           acidilactici DSM 20284]
          Length = 317

 Score = 54.6 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          +      +E +      L++    E  Y H+ 
Sbjct: 180 VAEIIKLILRDESVHGTYIGYKFQLGMKDLGENEQQELKDWMYNFLYDLYANEEKYVHKV 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        + ++ AN+    +G +PLF  TE   NP   M+ +       +FF
Sbjct: 240 Y--DQVGWT-EEVLTFTRYNANKALMNLGQDPLFPDTEADVNPIV-MNGISTGTSNHDFF 295


>gi|329729655|gb|EGG66056.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 21193]
          Length = 323

 Score = 54.6 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  Q+   +L++  L E +Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
                   +G+       Y+++  N+    +G EP F+  E NP   +   +D   +  +
Sbjct: 241 KMLYDD--LGIT-EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|319891738|ref|YP_004148613.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317161434|gb|ADV04977.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus pseudintermedius HKU10-03]
 gi|323465093|gb|ADX77246.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           pseudintermedius ED99]
          Length = 320

 Score = 54.6 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  ++   +L +    E +Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQSLRNELSESEKQKADKEMYQLLEDLYANEASYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
                   +GL       Y+++  N+    +G EP F+  E +P   +   +D   +  +
Sbjct: 241 RSLY--DPIGLTDDVM-NYVRYNGNKALSNLGFEPYFEEREFSPI--IENALDTSTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|90962208|ref|YP_536124.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           salivarius UCC118]
 gi|301300452|ref|ZP_07206652.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
 gi|90821402|gb|ABE00041.1| Ribonucleoside-diphosphate reductase beta chain [Lactobacillus
           salivarius UCC118]
 gi|300214875|gb|ADJ79291.1| Ribonucleoside-diphosphate reductase beta chain [Lactobacillus
           salivarius CECT 5713]
 gi|300851949|gb|EFK79633.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
          Length = 326

 Score = 54.6 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 6/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E      +EF      +L+E    E  Y H  
Sbjct: 180 VAEIIKLILRDESVHGTYIGYKFQLGFNELSDDEQEEFTSWMYDLLYELYENEEKYTHLL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEK-NFF 120
             K  VG        ++++ AN+    +G++PLF   Y +N  P +   I       +FF
Sbjct: 240 YDK--VGWT-DDVLVFLRYNANKALMNLGMDPLFADGYAQNVNPVVMNGISTSTSNHDFF 296


>gi|15923722|ref|NP_371256.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|15926409|ref|NP_373942.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus N315]
 gi|21282423|ref|NP_645511.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MW2]
 gi|49482989|ref|YP_040213.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|49485604|ref|YP_042825.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57651569|ref|YP_185668.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus COL]
 gi|82750436|ref|YP_416177.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus RF122]
 gi|87162072|ref|YP_493420.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
 gi|88194508|ref|YP_499303.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus NCTC 8325]
 gi|148267192|ref|YP_001246135.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus JH9]
 gi|150393241|ref|YP_001315916.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus JH1]
 gi|151220913|ref|YP_001331735.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus str. Newman]
 gi|156979060|ref|YP_001441319.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus Mu3]
 gi|161508997|ref|YP_001574656.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|221141144|ref|ZP_03565637.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus str. JKD6009]
 gi|253315835|ref|ZP_04839048.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus str. CF-Marseille]
 gi|253731358|ref|ZP_04865523.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_TCH959]
 gi|253732821|ref|ZP_04866986.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH130]
 gi|255005523|ref|ZP_05144124.2| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus Mu50-omega]
 gi|257424852|ref|ZP_05601279.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257427520|ref|ZP_05603919.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257430151|ref|ZP_05606535.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257432852|ref|ZP_05609212.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257435756|ref|ZP_05611804.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus M876]
 gi|257794947|ref|ZP_05643926.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9781]
 gi|258418263|ref|ZP_05682528.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A9763]
 gi|258421560|ref|ZP_05684485.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9719]
 gi|258430755|ref|ZP_05688467.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A9299]
 gi|258441753|ref|ZP_05691025.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A8115]
 gi|258445806|ref|ZP_05693983.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A6300]
 gi|258449617|ref|ZP_05697719.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A6224]
 gi|258452940|ref|ZP_05700934.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A5948]
 gi|258454017|ref|ZP_05701989.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A5937]
 gi|262049516|ref|ZP_06022386.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
           aureus D30]
 gi|262052319|ref|ZP_06024522.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
           aureus 930918-3]
 gi|269202352|ref|YP_003281621.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ED98]
 gi|282894500|ref|ZP_06302729.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A8117]
 gi|282903362|ref|ZP_06311253.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C160]
 gi|282905140|ref|ZP_06312998.1| ribonucleoside-diphosphate reductase beta subunit [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282908118|ref|ZP_06315949.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282910377|ref|ZP_06318181.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282913572|ref|ZP_06321361.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus M899]
 gi|282918525|ref|ZP_06326262.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C427]
 gi|282922028|ref|ZP_06329725.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9765]
 gi|282923491|ref|ZP_06331171.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C101]
 gi|282926597|ref|ZP_06334227.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A10102]
 gi|283957564|ref|ZP_06375017.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|284023753|ref|ZP_06378151.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus 132]
 gi|293500617|ref|ZP_06666468.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|293509565|ref|ZP_06668276.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus M809]
 gi|293524151|ref|ZP_06670838.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus M1015]
 gi|294849402|ref|ZP_06790145.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A9754]
 gi|295406453|ref|ZP_06816259.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8819]
 gi|295427309|ref|ZP_06819944.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|296275141|ref|ZP_06857648.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MR1]
 gi|297208541|ref|ZP_06924970.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ATCC 51811]
 gi|297245179|ref|ZP_06929053.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8796]
 gi|297590338|ref|ZP_06948977.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MN8]
 gi|300912633|ref|ZP_07130076.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH70]
 gi|304381650|ref|ZP_07364299.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ATCC BAA-39]
 gi|4490610|emb|CAB38643.1| ribonucleotide reductase minor subunit [Staphylococcus aureus]
 gi|13700623|dbj|BAB41920.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           aureus subsp. aureus N315]
 gi|14246501|dbj|BAB56894.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|14329710|emb|CAC40668.1| ribonucleotide-diphosphate reductase beta chain [Staphylococcus
           aureus]
 gi|21203860|dbj|BAB94559.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           aureus subsp. aureus MW2]
 gi|49241118|emb|CAG39796.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|49244047|emb|CAG42473.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57285755|gb|AAW37849.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus COL]
 gi|82655967|emb|CAI80371.1| ribonucelotide diphosphate reductase beta chain [Staphylococcus
           aureus RF122]
 gi|87128046|gb|ABD22560.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
 gi|87202066|gb|ABD29876.1| ribonucleotide-disphosphate reductase beta chain, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|147740261|gb|ABQ48559.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149945693|gb|ABR51629.1| Ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150373713|dbj|BAF66973.1| ribonucleotide-diphosphate reductase beta chain [Staphylococcus
           aureus subsp. aureus str. Newman]
 gi|156721195|dbj|BAF77612.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           aureus subsp. aureus Mu3]
 gi|160367806|gb|ABX28777.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|253724883|gb|EES93612.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_TCH959]
 gi|253729186|gb|EES97915.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH130]
 gi|257272422|gb|EEV04545.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257275713|gb|EEV07186.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257279348|gb|EEV09949.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257282267|gb|EEV12402.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257284947|gb|EEV15066.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus M876]
 gi|257788919|gb|EEV27259.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9781]
 gi|257839056|gb|EEV63535.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A9763]
 gi|257842486|gb|EEV66910.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9719]
 gi|257849427|gb|EEV73397.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A9299]
 gi|257852222|gb|EEV76149.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A8115]
 gi|257855382|gb|EEV78320.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A6300]
 gi|257857125|gb|EEV80024.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A6224]
 gi|257859451|gb|EEV82305.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A5948]
 gi|257863882|gb|EEV86638.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A5937]
 gi|259159759|gb|EEW44800.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
           aureus 930918-3]
 gi|259162352|gb|EEW46924.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
           aureus D30]
 gi|262074642|gb|ACY10615.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ED98]
 gi|269940309|emb|CBI48686.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
           aureus subsp. aureus TW20]
 gi|282314359|gb|EFB44749.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C101]
 gi|282317659|gb|EFB48031.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C427]
 gi|282322604|gb|EFB52926.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus M899]
 gi|282325769|gb|EFB56077.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282327783|gb|EFB58065.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282331965|gb|EFB61476.1| ribonucleoside-diphosphate reductase beta subunit [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282591490|gb|EFB96562.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A10102]
 gi|282593686|gb|EFB98678.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9765]
 gi|282596317|gb|EFC01278.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C160]
 gi|282763213|gb|EFC03344.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A8117]
 gi|283470026|emb|CAQ49237.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus ST398]
 gi|283791015|gb|EFC29830.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|285816434|gb|ADC36921.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus aureus 04-02981]
 gi|290921114|gb|EFD98175.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus M1015]
 gi|291095622|gb|EFE25883.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|291467662|gb|EFF10177.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus M809]
 gi|294823934|gb|EFG40360.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A9754]
 gi|294968598|gb|EFG44621.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8819]
 gi|295128697|gb|EFG58328.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|296886796|gb|EFH25700.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ATCC 51811]
 gi|297177850|gb|EFH37099.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8796]
 gi|297576637|gb|EFH95352.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MN8]
 gi|298694063|gb|ADI97285.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
           aureus ED133]
 gi|300886879|gb|EFK82081.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH70]
 gi|302332442|gb|ADL22635.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus JKD6159]
 gi|302750629|gb|ADL64806.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus str. JKD6008]
 gi|304339753|gb|EFM05698.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ATCC BAA-39]
 gi|312438843|gb|ADQ77914.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH60]
 gi|312829224|emb|CBX34066.1| ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315129414|gb|EFT85407.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus CGS03]
 gi|315194351|gb|EFU24743.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus CGS00]
 gi|315196404|gb|EFU26755.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus CGS01]
 gi|320139937|gb|EFW31798.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus MRSA131]
 gi|320141974|gb|EFW33802.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus MRSA177]
 gi|323438919|gb|EGA96654.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus O11]
 gi|323441867|gb|EGA99507.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus O46]
 gi|329313453|gb|AEB87866.1| Ribonucleoside-diphosphate reductase class Ib beta subunit
           [Staphylococcus aureus subsp. aureus T0131]
 gi|329724628|gb|EGG61135.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 21172]
 gi|329728537|gb|EGG64970.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 21189]
          Length = 323

 Score = 54.6 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  Q+   +L++  L E +Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
                   +G+       Y+++  N+    +G EP F+  E NP   +   +D   +  +
Sbjct: 241 KMLYDD--LGIT-EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|282916074|ref|ZP_06323837.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus D139]
 gi|283769895|ref|ZP_06342787.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus H19]
 gi|282320022|gb|EFB50369.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus D139]
 gi|283460042|gb|EFC07132.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus H19]
          Length = 323

 Score = 54.6 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  Q+   +L++  L E +Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
                   +G+       Y+++  N+    +G EP F+  E NP   +   +D   +  +
Sbjct: 241 KMLYDD--LGIT-EDVLNYVKYNGNKALSNLGFEPYFEEREFNPI--IENALDTTTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|227891214|ref|ZP_04009019.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           salivarius ATCC 11741]
 gi|227867088|gb|EEJ74509.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           salivarius ATCC 11741]
          Length = 326

 Score = 54.6 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 6/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E      +EF      +L+E    E  Y H  
Sbjct: 180 VAEIIKLILRDESVHGTYIGYKFQLGFNELSDDEQEEFTSWMYDLLYELYENEEKYTHLL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEK-NFF 120
             K  VG        ++++ AN+    +G++PLF   Y +N  P +   I       +FF
Sbjct: 240 YDK--VGWT-DDVLVFLRYNANKALMNLGMDPLFADGYAQNVNPVVMNGISTSTSNHDFF 296


>gi|325977861|ref|YP_004287577.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325177789|emb|CBZ47833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 320

 Score = 54.2 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E        F++    +L++    E  Y    
Sbjct: 181 VAEIIKLIIRDESVHGTYIGYKFQLGFNELSEEEQDNFREWMYDLLYQLYENEENYTKSL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 241 Y--DGVGWT-DEVLTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|269217712|ref|ZP_06161566.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 848 str. F0332]
 gi|269212647|gb|EEZ78987.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 848 str. F0332]
          Length = 325

 Score = 54.2 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       E Q+ + +++ +    E  Y    
Sbjct: 187 TADLIRLIIRDEAVHGYYIGYKYQKALAKASQERRDELQEYAYSLVMDLYDNEELYTESL 246

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                +GL     + +++  AN+  + +G E LF   +   NP     +S   D     +
Sbjct: 247 Y--DEMGLT-EDVKMFLRHNANKALNNLGYEALFGPDQTAVNPSILAALSPNADENH--D 301

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G         WD
Sbjct: 302 FFSGSGSSYVIGTAEATTDDDWD 324


>gi|262203177|ref|YP_003274385.1| ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM
           43247]
 gi|262086524|gb|ACY22492.1| Ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM
           43247]
          Length = 334

 Score = 54.2 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y    
Sbjct: 196 TADLIRLIIRDEAVHGYYIGYKYQRGLEVQTAERRQELKDYTFELLFELYDNESDYTEAL 255

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                VGL     ++++++ AN+    +G E +F   E   NP     +S   D     +
Sbjct: 256 Y--DEVGLT-EDVKKFLRYNANKALMNLGYEAMFPKDETDVNPAILSALSPNADENH--D 310

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 311 FFSGSGSSYVIGKAVNTEDEDWD 333


>gi|288904913|ref|YP_003430135.1| ribonucleoside-diphosphate reductase (minor subunit) [Streptococcus
           gallolyticus UCN34]
 gi|306830970|ref|ZP_07464132.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|288731639|emb|CBI13196.1| ribonucleoside-diphosphate reductase (minor subunit) [Streptococcus
           gallolyticus UCN34]
 gi|304426993|gb|EFM30103.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
          Length = 320

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E        F++    +L++    E  Y    
Sbjct: 181 VAEIIKLIIRDESVHGTYIGYKFQLGFNELSEEEQDNFREWMYDLLYQLYENEENYTKSL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 241 Y--DGVGWT-DEVLTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|306833073|ref|ZP_07466204.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           bovis ATCC 700338]
 gi|304424782|gb|EFM27917.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           bovis ATCC 700338]
          Length = 320

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E        F++    +L++    E  Y    
Sbjct: 181 VAEIIKLIIRDESVHGTYIGYKFQLGFNELSEEEQDNFREWMYDLLYQLYENEENYTKSL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 241 Y--DGVGWT-DEVLTFLRYNANKALMNLGQDPLFPDTANDVNPIV-MNGISTGTSNHDFF 296


>gi|238750475|ref|ZP_04611976.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia rohdei
           ATCC 43380]
 gi|238711406|gb|EEQ03623.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia rohdei
           ATCC 43380]
          Length = 323

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +  +   +E +  +  +L +    E+ Y  + 
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLEKVDNNRRQEIKNFAFDLLQDLYDNEVRYTEDL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
             K  VG      + ++ + AN+    +G E LF   +   NP   +   +    ++N  
Sbjct: 245 YDK--VGWT-EDVKSFLHYNANKALMNLGYEALFPANQAEVNPA--ILAALSPNADENHD 299

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 300 FFSGSGSSYVIGKAVITEDEDWD 322


>gi|25028975|ref|NP_739029.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           efficiens YS-314]
 gi|259508040|ref|ZP_05750940.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
 gi|23494262|dbj|BAC19229.1| ribonucleotide reductase beta chain [Corynebacterium efficiens
           YS-314]
 gi|259164381|gb|EEW48935.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
          Length = 334

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 43/98 (43%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E ++ +  +L++    E  Y  + 
Sbjct: 196 TADVIRLIIRDEAVHGYYVGYKYQKALARESAQRQEELKEYAFDLLYDLYENETQYTEDL 255

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 256 Y--DELGWT-EDVKRFLRYNANKAMNNLGYEGLFPADE 290


>gi|13274105|emb|CAC33823.1| ribonucleotide reductase beta-subunit [Corynebacterium glutamicum]
          Length = 201

 Score = 54.2 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 12/140 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E ++ +  +L++    E  Y+ + 
Sbjct: 63  TADVIRLIIRDEAVHGYYIGYKYQKAVAKETPERQEELKEYTFDLLYDLYDNETQYSEDL 122

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-----NPFPWMSEVIDLKKEKN 118
                +G      ++++++ AN+  + +G E LF   E     N    +S   D     +
Sbjct: 123 YDD--LGWT-EDVKRFLRYNANKALNNLGYEGLFPADETKVSPNILSALSPNADENH--D 177

Query: 119 FFETRVTEYQ--QGAGLKWD 136
           FF    + Y   +    + D
Sbjct: 178 FFSGSGSSYVIGKAENTEDD 197


>gi|229552273|ref|ZP_04440998.1| ribonucleoside-diphosphate reductase [Lactobacillus rhamnosus
           LMS2-1]
 gi|258539683|ref|YP_003174182.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus Lc 705]
 gi|229314345|gb|EEN80318.1| ribonucleoside-diphosphate reductase [Lactobacillus rhamnosus
           LMS2-1]
 gi|257151359|emb|CAR90331.1| Ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           rhamnosus Lc 705]
          Length = 326

 Score = 53.9 bits (129), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ Q     +L++    E  Y ++ 
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEAEQQQLQDWMYDLLYDLYENEEKYTNDL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
             K            ++++ AN+    +G E  F  T    NP   M+ +       +FF
Sbjct: 240 YAKTKW---TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295


>gi|258508470|ref|YP_003171221.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus GG]
 gi|257148397|emb|CAR87370.1| Ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           rhamnosus GG]
 gi|259649782|dbj|BAI41944.1| ribonucleotide reductase beta subunit [Lactobacillus rhamnosus GG]
          Length = 326

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ Q     +L++    E  Y ++ 
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEAEQQQLQDWMYDLLYDLYENEEKYTNDL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
             K            ++++ AN+    +G E  F  T    NP   M+ +       +FF
Sbjct: 240 YAKTKW---TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295


>gi|218690804|ref|YP_002399016.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ED1a]
 gi|218428368|emb|CAR09297.2| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli ED1a]
          Length = 319

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 54/134 (40%), Gaps = 6/134 (4%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFF 120
             +      +   + ++ + AN+    +G EPLF       NP  + +   +  +  +FF
Sbjct: 241 YAETPW---SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAIFAALSPNADENHDFF 297

Query: 121 ETRVTEYQQGAGLK 134
               + Y  G  ++
Sbjct: 298 SGSGSSYVMGKAVE 311


>gi|323337103|gb|EGA78359.1| Rnr2p [Saccharomyces cerevisiae Vin13]
          Length = 296

 Score = 53.9 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVIN 27
           M G+    + I RDE LH +F    + 
Sbjct: 259 MPGLTFSNELICRDEGLHTDFACLFVR 285


>gi|227502192|ref|ZP_03932241.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
           49725]
 gi|227077016|gb|EEI14979.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
           49725]
          Length = 337

 Score = 53.9 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +          +E ++ +  ++ +   LE+ Y+ E 
Sbjct: 199 TADMIRLILRDKAVHGYYSGYKFQRGLDHATEARREEMREFTFDLVRKLYDLEMRYSGEL 258

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                 GL       ++++ AN+    +G   LF Y E   NP     ++   D     +
Sbjct: 259 YEPY--GL-MDDVATFVRYNANKALMNLGYPNLFPYEECQVNPKILAALTPGSDENH--D 313

Query: 119 FFETRVTEYQQGAGLK-----WD 136
           FF    + Y  G  ++     WD
Sbjct: 314 FFSGSGSSYIIGKAVETSDADWD 336


>gi|227510692|ref|ZP_03940741.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
 gi|227513708|ref|ZP_03943757.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           buchneri ATCC 11577]
 gi|227522501|ref|ZP_03952550.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           hilgardii ATCC 8290]
 gi|227083027|gb|EEI18339.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           buchneri ATCC 11577]
 gi|227090323|gb|EEI25635.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           hilgardii ATCC 8290]
 gi|227189813|gb|EEI69880.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
          Length = 318

 Score = 53.9 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 7/122 (5%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
             +AE  + I+RDES+H  +          + P    ++ +     +L++    E  Y H
Sbjct: 179 PNVAEIIKLILRDESVHGTYIGYKFQIGFNQLPKTKQEDLKNWLYDLLYKLYANEEKYTH 238

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN 118
                   G        ++++ AN+    +G +PLF  T    NP   M+ +       +
Sbjct: 239 LLY--DQTGWT-DDVLVFIRYNANKALMNLGQDPLFPDTAEDVNPVV-MNGISTSTANHD 294

Query: 119 FF 120
           FF
Sbjct: 295 FF 296


>gi|295395248|ref|ZP_06805456.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294972010|gb|EFG47877.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 324

 Score = 53.9 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 12/140 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  +L++    E+ Y H+ 
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKYQRALANESTERRDELKDYTFALLYDLYENEVQYTHDL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VGL+    ++++ + AN+    +G E +F  T    NP     +S   D     +
Sbjct: 246 Y--DSVGLS-EDVKKFLNYNANKALMNLGYEAMFPSTVTDVNPAILSALSPSSDENH--D 300

Query: 119 FFETRVTEYQ--QGAGLKWD 136
           FF    + Y   +    + D
Sbjct: 301 FFSGSGSSYVIGKAENTEDD 320


>gi|238762669|ref|ZP_04623638.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           kristensenii ATCC 33638]
 gi|238698974|gb|EEP91722.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           kristensenii ATCC 33638]
          Length = 323

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L +    E+ Y  + 
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLEKVDISRRQEIKNFAYNLLQDLYDNEVRYTADL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
                VG      ++++ + AN+    +G E LF   +   NP   +   +    ++N  
Sbjct: 245 Y--DGVGWT-EDVKKFLHYNANKALMNLGYEALFPADQANVNPA--ILAALSPNADENHD 299

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 300 FFSGSGSSYVIGKAVNTEDEDWD 322


>gi|306834752|ref|ZP_07467817.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           accolens ATCC 49726]
 gi|304569364|gb|EFM44864.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           accolens ATCC 49726]
          Length = 337

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +          +E ++ +  ++ +   LE+ Y+ E 
Sbjct: 199 TADMIRLILRDKAVHGYYSGYKFQRGLDHATEDRREEMREFTFDLVRKLYDLEMRYSGEL 258

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                 GL       ++++ AN+    +G   LF Y E   NP     ++   D     +
Sbjct: 259 YEPY--GL-MDDVATFVRYNANKALMNLGYPNLFPYEECQVNPKILAALTPGSDENH--D 313

Query: 119 FFETRVTEYQQGAGLK-----WD 136
           FF    + Y  G  ++     WD
Sbjct: 314 FFSGSGSSYIIGKAVETSDADWD 336


>gi|146318863|ref|YP_001198575.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis 05ZYH33]
 gi|146321071|ref|YP_001200782.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis 98HAH33]
 gi|223932819|ref|ZP_03624816.1| Ribonucleoside-diphosphate reductase [Streptococcus suis 89/1591]
 gi|253751944|ref|YP_003025085.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis SC84]
 gi|253753767|ref|YP_003026908.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis
           P1/7]
 gi|253755355|ref|YP_003028495.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis
           BM407]
 gi|330833008|ref|YP_004401833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis ST3]
 gi|145689669|gb|ABP90175.1| Ribonucleotide reductase, beta subunit [Streptococcus suis 05ZYH33]
 gi|145691877|gb|ABP92382.1| Ribonucleotide reductase, beta subunit [Streptococcus suis 98HAH33]
 gi|223898528|gb|EEF64892.1| Ribonucleoside-diphosphate reductase [Streptococcus suis 89/1591]
 gi|251816233|emb|CAZ51860.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis SC84]
 gi|251817819|emb|CAZ55572.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis BM407]
 gi|251820013|emb|CAR46187.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis P1/7]
 gi|292558520|gb|ADE31521.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           suis GZ1]
 gi|319758306|gb|ADV70248.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis JS14]
 gi|329307231|gb|AEB81647.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis ST3]
          Length = 319

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E       + +     +L++    E  Y    
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELSEEEQDKLRDWMYDLLYQLYENEEGYTRSL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 240 Y--DAVGWT-EEVLTFLRYNANKALMNLGQDPLFPDSADDVNPII-MNGISTGTSNHDFF 295


>gi|291618545|ref|YP_003521287.1| NrdF [Pantoea ananatis LMG 20103]
 gi|291153575|gb|ADD78159.1| NrdF [Pantoea ananatis LMG 20103]
 gi|327394924|dbj|BAK12346.1| ribonucleoside-diphosphate reductase 2 beta subunit NrdF [Pantoea
           ananatis AJ13355]
          Length = 319

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +  QQ +  +L      E+ Y    
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKALEQVDEGRREALQQFAIDLLLALYENEVVYTEAL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VG  A   + ++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 241 YGD--VGW-AEEVKTFLHYNANKALMNLGYEALFPAELTQVNPAILSALSPNADENH--D 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|194172964|ref|YP_002003608.1| ribonucleoside diphosphate reductase beta chain [Escherichia phage
           rv5]
 gi|114796002|gb|ABI79176.1| ribonucleoside diphosphate reductase beta chain [Escherichia phage
           rv5]
          Length = 362

 Score = 53.5 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 61/138 (44%), Gaps = 7/138 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWT-KEFQQKSRTMLHEATLLEIAYAHE 62
           +A+  Q IM DE LH      +I+ +  +     +  E + + + +L E    E  ++  
Sbjct: 218 VAQLVQKIMLDEMLHSKGDFAIIDILLNDPAWEKSFLEIKGELKEILDEVRTKEYGWSDY 277

Query: 63  TM--PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVI--DLKKEK 117
                +  +GLN+P  ++++ +  +      G++  F   T++P P+M   +   L++  
Sbjct: 278 IFSEGRAIIGLNSPLLKEWVDYNCSPIYDYYGIDKDFVPPTKDPLPFMQVWMKPSLQQTA 337

Query: 118 NFFETRVTEYQQGAGLKW 135
           N  E   T+Y+    +  
Sbjct: 338 N-QEMSNTDYRVNTTVND 354


>gi|332087397|gb|EGI92525.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           boydii 5216-82]
          Length = 319

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   + P    +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKIPLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|298345735|ref|YP_003718422.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 43063]
 gi|304390565|ref|ZP_07372518.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
 gi|298235796|gb|ADI66928.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 43063]
 gi|304326321|gb|EFL93566.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
          Length = 322

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 10/134 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E+     +E +  + ++L +    E  Y    
Sbjct: 184 TADLIRLIIRDEAVHGYYIGYKYQLAMRESSESRRQEMKDYTFSLLMDLYDNEELYTETL 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                +GL     ++++++ AN+    +G E LF   +   NP     +S   D     +
Sbjct: 244 Y--DPLGLT-EDVKKFLKYNANKALMNLGYEALFTADQVNVNPAILAALSPAADENH--D 298

Query: 119 FFETRVTEYQQGAG 132
           FF    + Y  G  
Sbjct: 299 FFSGSGSSYAIGTA 312


>gi|302023955|ref|ZP_07249166.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis 05HAS68]
          Length = 320

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E       + +     +L++    E  Y    
Sbjct: 181 VAEIIKLIIRDESVHGTYIGYKFQLGFNELSEEEQDKLRDWMYDLLYQLYENEEGYTRSL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  +    NP   M+ +       +FF
Sbjct: 241 Y--DAVGWT-EEVLTFLRYNANKALMNLGQDPLFPDSADDVNPII-MNGISTGTSNHDFF 296


>gi|315654326|ref|ZP_07907234.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 51333]
 gi|315657771|ref|ZP_07910651.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
 gi|315491361|gb|EFU80978.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 51333]
 gi|315491568|gb|EFU81179.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
          Length = 322

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 10/134 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          E+     +E +  + ++L +    E  Y    
Sbjct: 184 TADLIRLIIRDEAVHGYYIGYKYQLAMRESSESRRQEMKDYTFSLLMDLYDNEELYTETL 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP--FPWMSEVIDLKKEKN 118
                +GL     ++++++ AN+    +G E LF   +   NP     +S   D     +
Sbjct: 244 Y--DPLGLT-EDVKKFLKYNANKALMNLGYEALFTADQVNVNPAILAALSPAADENH--D 298

Query: 119 FFETRVTEYQQGAG 132
           FF    + Y  G  
Sbjct: 299 FFSGSGSSYAIGTA 312


>gi|325677552|ref|ZP_08157215.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
 gi|325551623|gb|EGD21322.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
          Length = 322

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 10/132 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +             ++ +  +L      E+AYA + 
Sbjct: 184 TADLIRLIIRDEAVHGYYIGYKCRKALERLDASARDAHRRYTYALLETLYANEVAYAADL 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKN 118
                VG  A     YM+F AN+    +G EP+F+ +E   NP   +   +D    +  +
Sbjct: 244 Y--DEVGWTAEVVS-YMRFNANKALANLGYEPMFRASECQVNPA--ILSALDPGAGENHD 298

Query: 119 FFETRVTEYQQG 130
           FF    + Y  G
Sbjct: 299 FFSGSGSAYVIG 310


>gi|194433043|ref|ZP_03065326.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|194418770|gb|EDX34856.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|320180201|gb|EFW55137.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           ATCC 9905]
 gi|332088601|gb|EGI93714.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           dysenteriae 155-74]
          Length = 319

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   + P    +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKIPLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|242069239|ref|XP_002449896.1| hypothetical protein SORBIDRAFT_05g025245 [Sorghum bicolor]
 gi|241935739|gb|EES08884.1| hypothetical protein SORBIDRAFT_05g025245 [Sorghum bicolor]
          Length = 79

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 66  KGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 116
              V +N     QY+ FIA+     +  + ++    NPF WM E+I L+ +
Sbjct: 27  NALVRMNGRLMSQYIGFIADYLLMALEHKKMYDVA-NPFDWM-ELISLQGK 75


>gi|227548647|ref|ZP_03978696.1| ribonucleoside-diphosphate reductase [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227079261|gb|EEI17224.1| ribonucleoside-diphosphate reductase [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 332

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 43/98 (43%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      + + +       E +  +  +L++    E  Y  + 
Sbjct: 194 TADVIRLIIRDEAVHGYYIGYKYQRGQADLSQAERDELKDYTFNLLYDLYENETQYTEDI 253

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 254 Y--DPLGWT-EDVKRFLRYNANKALNNLGYEGLFPQDE 288


>gi|332162772|ref|YP_004299349.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325667002|gb|ADZ43646.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 323

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 60/143 (41%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +  +   +E +  +  +L +    EI Y  E+
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLEKLDNNRRQEIKNFAFDLLQDLYDNEIHY-TES 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
           +  G  G      ++++ + AN+    +G E LF  ++   NP   +   +    ++N  
Sbjct: 244 LYDGV-GWT-EDVKKFLHYNANKALMNLGYEALFPASQANVNPA--ILAALSPNADENHD 299

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 300 FFSGSGSSYVIGKAVNTEDEDWD 322


>gi|84997706|ref|XP_953574.1| ribonucleoside reductase [Theileria annulata]
 gi|65304571|emb|CAI72896.1| ribonucleoside reductase, putative [Theileria annulata]
          Length = 332

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 11/111 (9%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I  D  +H  F       ++        K  + +   ++ +A  LE  +  +     F  
Sbjct: 212 ITNDRIIHTRFAHCTFRLLQ-------NKMLESEVLEIIKQALKLEYQFILQYFTIQFFN 264

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---DLKKEKN 118
           L+    + Y+++I N      G + L+  +E    W++  I   +++K+ N
Sbjct: 265 LSTNVIKSYLEWIGNNILLVCGYKTLY-TSEFDIDWLNHPIIDLNIQKQTN 314


>gi|238794433|ref|ZP_04638043.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           intermedia ATCC 29909]
 gi|238726228|gb|EEQ17772.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           intermedia ATCC 29909]
          Length = 330

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 17/144 (11%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   +  +   +E +  +  +L +    E+ Y  + 
Sbjct: 192 TADLIRLIIRDEAVHGYYIGYKFQQGLEKVDNARRQEIKNFAFDLLQDLYDNEVRYTEDL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
             K  VG      ++++ + AN+    +G E LF  ++     +S  I      +  +  
Sbjct: 252 YDK--VGWT-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENH 305

Query: 118 NFFETRVTEYQQGAGL-----KWD 136
           +FF    + Y  G  +      WD
Sbjct: 306 DFFSGSGSSYVIGKAINTEDEDWD 329


>gi|118586508|ref|ZP_01543952.1| ribonucleoside-diphosphate reductase 2, beta subunit [Oenococcus
           oeni ATCC BAA-1163]
 gi|118433072|gb|EAV39794.1| ribonucleoside-diphosphate reductase 2, beta subunit [Oenococcus
           oeni ATCC BAA-1163]
          Length = 337

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 3/97 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  +AE  + I+RDES+H  +          E      KE    +  +L++    E  Y 
Sbjct: 183 MANVAEIIKLIIRDESVHGTYIGYKFQLAYKELTEQEQKELNSWAYDLLYDLYDNEEKYT 242

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF 97
           H  +              ++++  N+    +GLEP+F
Sbjct: 243 H-QLYDEIDWF--DDVMIFLRYNGNKALMNLGLEPMF 276


>gi|153949141|ref|YP_001400043.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 31758]
 gi|152960636|gb|ABS48097.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia
           pseudotuberculosis IP 31758]
          Length = 323

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 57/144 (39%), Gaps = 17/144 (11%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +   +  +E +  +  +L +    E+ Y  + 
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLEKVDSVHRQEIKNFAFDLLQDLYDNEVRYTEDL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
                VG      ++++ + AN+    +G E LF  ++     +S  I      +  +  
Sbjct: 245 Y--DHVGWT-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENH 298

Query: 118 NFFETRVTEYQQGAGL-----KWD 136
           +FF    + Y  G  +      WD
Sbjct: 299 DFFSGSGSSYVIGKAVNTEDEDWD 322


>gi|330908707|gb|EGH37221.1| ribonucleotide reductase of class 1b (aerobic), beta subunit
           [Escherichia coli AA86]
          Length = 319

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISQARHEELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|312869696|ref|ZP_07729843.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           oris PB013-T2-3]
 gi|311094745|gb|EFQ53042.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           oris PB013-T2-3]
          Length = 339

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E      ++ +      L+E    E  Y H  
Sbjct: 189 VAEIIKLILRDESVHGTYIGYKFQVGLHERTEKQQQDMKDWLYNFLYELYDNEEKYTHLL 248

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
             K  +G        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 249 YDK--IGWT-DDVLTFIRYNANKALMNLGQDPLFPDTAADVNPVV-MNGISTSTSNHDFF 304


>gi|318606878|emb|CBY28376.1| ribonucleotide reductase of class Ib (aerobic),beta subunit
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 323

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 60/143 (41%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +  +   +E +  +  +L +    EI Y  E+
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLEKLDNNRRQEIKNFTFDLLQDLYDNEIHY-TES 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
           +  G  G      ++++ + AN+    +G E LF  ++   NP   +   +    ++N  
Sbjct: 244 LYDGV-GWT-EDVKKFLHYNANKALMNLGYEALFPASQANVNPA--ILAALSPNADENHD 299

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 300 FFSGSGSSYVIGKAVNTEDEDWD 322


>gi|50122260|ref|YP_051427.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           atrosepticum SCRI1043]
 gi|49612786|emb|CAG76236.1| ribonucleoside-diphosphate reductase 2 beta chain [Pectobacterium
           atrosepticum SCRI1043]
          Length = 320

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E 
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKFQRALAKADPARQQQVKNFAYDLLQDLYDNEVLYTQEL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VG      ++++ + AN+    +G E LF  +    NP     +S   D     +
Sbjct: 242 Y--DGVGWT-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--D 296

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 297 FFSGSGSSYVIGKAVNTEDEDWD 319


>gi|308183791|ref|YP_003927923.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|308047717|gb|ADO00260.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 242

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 51/122 (41%), Gaps = 10/122 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           ++E  + ++RDES+H  +          E      K F++    +L +    E A+  E 
Sbjct: 104 LSEVIKLVIRDESVHGTYLGYKFQLGYNELSATEQKTFKKWMDELLDDLLENEFAFTEEV 163

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-N 118
                +GL A   +Q++ + AN+    +GLE  F   E    NP   +   I  +    +
Sbjct: 164 Y--APIGL-AEDVKQFVHYNANKALQNMGLESRFPNAEIKDINPI--VMNGISTETANHD 218

Query: 119 FF 120
           FF
Sbjct: 219 FF 220


>gi|300718018|ref|YP_003742821.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           billingiae Eb661]
 gi|299063854|emb|CAX60974.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           billingiae Eb661]
          Length = 319

 Score = 53.1 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I++DE++H  +      +   +       E QQ +  +L      E+AY  E 
Sbjct: 181 TADLIRLIIKDEAVHGYYIGYKYQKALEKESPARKDELQQFAVELLLALYENELAY-TEA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKN 118
           +  G  G +    ++++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 240 LYDGV-GWS-EEVKKFLHYNANKALMNLGYEALFPAEMTDVNPAILSALSPNADENH--D 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  + 
Sbjct: 296 FFSGSGSSYVMGKAVD 311


>gi|294998842|gb|ADF58156.1| ribonucleoside-diphosphate reductase beta subunit [Pseudomonas
           phage JG004]
          Length = 348

 Score = 52.7 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 14  DESLHLNFGIDVINQIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKGFV-G 70
           DE LH     ++INQ   E     +++ +  +K R  +      E       +P G + G
Sbjct: 210 DEDLHGVVSAEIINQYYAEIGRPLSEDTRRVEKIRQAIDHVYAHECRIVDMAIPGGELNG 269

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFF 120
            +A + + ++++  N  C ++GLE  F+  + P   W        K  +FF
Sbjct: 270 ESAENYKAFVRYRLNVWCRRLGLEDHFENDDTPIKDWFEMNTYAYKMIDFF 320


>gi|326804460|ref|YP_004327264.1| ribonucleotide-diphosphate reductase beta subunit [Pseudomonas
           phage PAK_P1]
 gi|290873873|gb|ADD65076.1| ribonucleotide-diphosphate reductase beta subunit [Pseudomonas
           phage PAK_P1]
          Length = 348

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 14  DESLHLNFGIDVINQIKIENPHLWTKEFQ--QKSRTMLHEATLLEIAYAHETMPKGFV-G 70
           DE LH     ++INQ   E     +++ +  +K R  +      E       +P G + G
Sbjct: 210 DEDLHGVVSAEIINQYYAEIGRPLSEDTRRVEKIRQAIDHVYAHECRIVDMAIPGGELNG 269

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKNFF 120
            +A + + ++++  N  C ++GLE  F+  + P   W        K  +FF
Sbjct: 270 ESAENYKAFVRYRLNVWCRRLGLEDHFENDDTPIKDWFEMNTYAYKMIDFF 320


>gi|227112968|ref|ZP_03826624.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 320

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E 
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKFQRGLAKVDSARHQQVKNFAYDLLQDLYDNEVLYTQEL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VG      ++++ + AN+    +G E LF  +    NP     +S   D     +
Sbjct: 242 Y--DGVGWT-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--D 296

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 297 FFSGSGSSYVIGKAVNTEDEDWD 319


>gi|116617385|ref|YP_817756.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116096232|gb|ABJ61383.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 325

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 11/102 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           M+ +AE  + I+RDES+H  +         N+I  E       E Q     +L+E    E
Sbjct: 182 MLNVAEIIKLIIRDESVHGTYIGYKFQIGFNKISAEERT----ELQSWMYDLLYELYENE 237

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 98
             Y HE      +G        ++++ AN+    +G EP+F 
Sbjct: 238 EKYTHELYDD--LGWT-EQVLTFLRYNANKALMNLGQEPMFP 276


>gi|317049232|ref|YP_004116880.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
 gi|316950849|gb|ADU70324.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
          Length = 322

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E QQ +  +L      E+ Y    
Sbjct: 184 TADLIRLIIRDEAVHGYYIGYKYQKALENVDDARREELQQFAIELLLALYENEVVYTEAL 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                VG  A   + ++ + AN+    +G E LF     T NP   +   +    ++N  
Sbjct: 244 YAD--VGW-AEEVKTFLHYNANKALMNLGYEALFPAELTTVNPA--ILAALSPNADENHD 298

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 299 FFSGSGSSYVMGKAVE 314


>gi|284922618|emb|CBG35706.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           042]
          Length = 319

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMKKISQAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|218296962|ref|ZP_03497648.1| ribonucleotide reductase [Thermus aquaticus Y51MC23]
 gi|218242665|gb|EED09201.1| ribonucleotide reductase [Thermus aquaticus Y51MC23]
          Length = 323

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 52/132 (39%), Gaps = 4/132 (3%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            GIA   +   ++E++H  FG++++  ++ E P L+ + F ++      E    E A   
Sbjct: 181 KGIANAVEATSKEENIHGLFGVELLRLLREERPELFGEAFVEEVLRAAQELFRAEEALVD 240

Query: 62  ETM-PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKEK 117
                     +      ++++   N+     GL   F+  +       W +  +   K+ 
Sbjct: 241 WIFAGGDTPWVRGEEVLEFVKDRYNQVLALHGLPGPFQVRDEVLKDTAWFALELLADKDV 300

Query: 118 NFFETRVTEYQQ 129
           +FF  R   Y +
Sbjct: 301 DFFNKRSVAYAR 312


>gi|123441277|ref|YP_001005264.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088238|emb|CAL11027.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 323

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 60/143 (41%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +  +   +E +  +  +L +    EI Y  E+
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLEKVDNNRRQEIKNFAFDLLQDLYDNEIHY-TES 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
           +  G  G      ++++ + AN+    +G E LF  ++   NP   +   +    ++N  
Sbjct: 244 LYDGV-GWT-EDVKKFLHYNANKALMNLGYEALFPASQANVNPA--ILAALSPNADENHD 299

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 300 FFSGSGSSYVIGKAVNTEDEDWD 322


>gi|315658919|ref|ZP_07911786.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           lugdunensis M23590]
 gi|315496043|gb|EFU84371.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           lugdunensis M23590]
          Length = 322

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  ++   +L +    E++Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGIDAQSLRNELSENEKQQADKEMYVLLEDLYSNEVSYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           H       +GL       Y+++  N+    +G +P F+  + NP   +   +D   +  +
Sbjct: 241 HMLYDD--IGLT-EDVLNYVKYNGNKALSNLGFDPYFEEKDFNPI--IENALDTTTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|289551411|ref|YP_003472315.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus lugdunensis HKU09-01]
 gi|289180942|gb|ADC88187.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus lugdunensis HKU09-01]
          Length = 322

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E      ++  ++   +L +    E++Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGIDAQSLRNELSENEKQQADKEMYVLLEDLYSNEVSYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
           H       +GL       Y+++  N+    +G +P F+  + NP   +   +D   +  +
Sbjct: 241 HMLYDD--IGLT-EDVLNYVKYNGNKALSNLGFDPYFEEKDFNPI--IENALDTTTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|227431268|ref|ZP_03913322.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
 gi|227353030|gb|EEJ43202.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
          Length = 327

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 11/102 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           M+ +AE  + I+RDES+H  +         N+I  E       E Q     +L+E    E
Sbjct: 184 MLNVAEIIKLIIRDESVHGTYIGYKFQIGFNKISAEERT----ELQSWMYDLLYELYENE 239

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 98
             Y HE      +G        ++++ AN+    +G EP+F 
Sbjct: 240 EKYTHELYDD--LGWT-EQVLTFLRYNANKALMNLGQEPMFP 278


>gi|330861133|emb|CBX71396.1| ribonucleoside-diphosphate reductase 2 subunit beta [Yersinia
           enterocolitica W22703]
          Length = 239

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 60/143 (41%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +  +   +E +  +  +L +    EI Y  E+
Sbjct: 101 TADLIRLIIRDEAVHGYYIGYKFQKGLEKLDNNRRQEIKNFAFDLLQDLYDNEIHY-TES 159

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN-- 118
           +  G  G      ++++ + AN+    +G E LF  ++   NP   +   +    ++N  
Sbjct: 160 LYDGV-GWT-EDVKKFLHYNANKALMNLGYEALFPASQANVNPA--ILAALSPNADENHD 215

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 216 FFSGSGSSYVIGKAVNTEDEDWD 238


>gi|218706176|ref|YP_002413695.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UMN026]
 gi|293406173|ref|ZP_06650099.1| ribonucleotide reductase beta subunit [Escherichia coli FVEC1412]
 gi|298381910|ref|ZP_06991507.1| ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
           FVEC1302]
 gi|300898656|ref|ZP_07116977.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|301019059|ref|ZP_07183270.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|331674197|ref|ZP_08374957.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA280]
 gi|218433273|emb|CAR14173.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli UMN026]
 gi|291426179|gb|EFE99211.1| ribonucleotide reductase beta subunit [Escherichia coli FVEC1412]
 gi|298277050|gb|EFI18566.1| ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
           FVEC1302]
 gi|300357684|gb|EFJ73554.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|300399412|gb|EFJ82950.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|331068291|gb|EGI39686.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA280]
          Length = 319

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      + + +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKSQEKISQAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|213420353|ref|ZP_03353419.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 150

 Score = 52.7 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK 30
           M G A+  + I RDE+LHL     ++N ++
Sbjct: 116 MEGNAKIIRLIARDEALHLTGTQHMLNLLR 145


>gi|28377561|ref|NP_784453.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum WCFS1]
 gi|254555734|ref|YP_003062151.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum JDM1]
 gi|300769755|ref|ZP_07079637.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308179714|ref|YP_003923842.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270393|emb|CAD63296.1| ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
           plantarum WCFS1]
 gi|254044661|gb|ACT61454.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum JDM1]
 gi|300492663|gb|EFK27849.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308045205|gb|ADN97748.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 336

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 47/123 (38%), Gaps = 7/123 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +  +AE  + I+RDES+H  +          +       EF+      L++    E  Y 
Sbjct: 191 LPNVAEIIKLILRDESVHGTYIGYKFQLGFKDRSEKQQAEFKDWMFDFLYKLYENEENYI 250

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK 117
           H       +G +      + ++ AN+    +G + LF  T    NP   M+ +       
Sbjct: 251 HLVY--DQIGWS-DEVLTFSRYNANKALMNLGQDALFPDTAEDVNPVV-MNGISTGTSNH 306

Query: 118 NFF 120
           +FF
Sbjct: 307 DFF 309


>gi|213965886|ref|ZP_03394077.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
 gi|213951464|gb|EEB62855.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
          Length = 338

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 54/137 (39%), Gaps = 7/137 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  ++ +    EI Y  E 
Sbjct: 200 TADIIRLIIRDEAVHGYYIGYKYQRNLERLTQAERDELKDYTFDLMFDLYDNEIQYTEEM 259

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVIDLKKEKN--FF 120
                +G      ++++++  N+  + +G E +F   E    P +   +    ++N  FF
Sbjct: 260 Y--DELGWT-EDVKRFLRYNGNKALNNLGYEGMFPADETRVSPSILSALSPNADENHDFF 316

Query: 121 ETRVTEYQQG-AGLKWD 136
               + Y  G A +  D
Sbjct: 317 SGSGSSYVMGKAEVTQD 333


>gi|307547024|ref|YP_003899503.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
 gi|307219048|emb|CBV44318.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
          Length = 324

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      ++ +  +  +L +    E+ Y    
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQRALEKESAERQRQIKDTTYDLLLDLYDNEVQYTESL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                VGL     + ++ + AN+    +G E LF    
Sbjct: 246 Y--DEVGLT-EDVKAFLHYNANKALMNLGYEALFPNAT 280


>gi|261820460|ref|YP_003258566.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           wasabiae WPP163]
 gi|261604473|gb|ACX86959.1| Ribonucleoside-diphosphate reductase [Pectobacterium wasabiae
           WPP163]
          Length = 320

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E 
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKFQRGLAKADPARQQQVKNFAYDLLQDLYDNEVLYTQEL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VG      ++++ + AN+    +G E LF  +    NP     +S   D     +
Sbjct: 242 Y--DGVGWT-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--D 296

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 297 FFSGSGSSYVIGKAVNTEDEDWD 319


>gi|227358546|ref|ZP_03842871.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
           ATCC 29906]
 gi|227161257|gb|EEI46331.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
           ATCC 29906]
          Length = 337

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +         +    L  ++ +  + ++L +    E+ Y  + 
Sbjct: 199 TADLIRLIIRDEAVHGYYIGYKFQNQLLNKSSLEKQDIKDFAFSLLLDLYDNEVKYTEDL 258

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFF 120
                VG      ++++ + AN+    +G E LF     N  P +   +  D  +  +FF
Sbjct: 259 Y--DSVGWT-EDVKKFLHYNANKALMNLGYEALFPDEITNVSPAILSSLSPDANENHDFF 315

Query: 121 ETRVTEYQQGAGL-----KWD 136
               + Y  G  +      WD
Sbjct: 316 SGSGSSYVIGKTINTEDDDWD 336


>gi|23335914|ref|ZP_00121145.1| COG0208: Ribonucleotide reductase, beta subunit [Bifidobacterium
           longum DJO10A]
 gi|189440326|ref|YP_001955407.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum DJO10A]
 gi|189428761|gb|ACD98909.1| Ribonucleotide reductase beta subunit [Bifidobacterium longum
           DJO10A]
          Length = 330

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 53/138 (38%), Gaps = 10/138 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       + Q  +  +L+E    E+ Y    
Sbjct: 192 TADVIRLIIRDEAVHGYYIGYKYQKGIAQLSDAERLDLQDYTYDLLNELYDNEVEYTQSL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
             +  V L     E+++++  N+    +G   LF       NP   +   +    ++N  
Sbjct: 252 YDR--VDLT-DDVEKFLRYNGNKALMNLGYPALFPAEICDVNPA--ILAALSPNADENHD 306

Query: 119 FFETRVTEYQQGAGLKWD 136
           FF    + Y  G   + D
Sbjct: 307 FFSGSGSSYVMGKAEETD 324


>gi|324005772|gb|EGB74991.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 57-2]
          Length = 319

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETTW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|253689503|ref|YP_003018693.1| Ribonucleoside-diphosphate reductase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251756081|gb|ACT14157.1| Ribonucleoside-diphosphate reductase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 320

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E 
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKFQRGLAKADPARQQQVKNFAYDLLQDLYDNEVLYTQEL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VG      ++++ + AN+    +G E LF  +    NP     +S   D     +
Sbjct: 242 Y--DGVGWT-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--D 296

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 297 FFSGSGSSYVIGKAVNTEDEDWD 319


>gi|227329868|ref|ZP_03833892.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 320

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E 
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKFQRGLAKADPARQQQVKNFAYDLLQDLYDNEVLYTQEL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VG      ++++ + AN+    +G E LF  +    NP     +S   D     +
Sbjct: 242 Y--DGVGWT-EDVKKFLHYNANKALMNLGYEALFPASMTDVNPAILSALSPNADENH--D 296

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 297 FFSGSGSSYVIGKAVNTEDEDWD 319


>gi|199598384|ref|ZP_03211803.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus HN001]
 gi|199590703|gb|EDY98790.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus HN001]
          Length = 326

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    ++ Q     +L++    E  Y ++ 
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPAAEQQQLQDWMYDLLYDLYENEEKYTNDL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
             K            ++++ AN+    +G E  F  T    NP   M+ +       +FF
Sbjct: 240 YAKTKW---TDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDFF 295


>gi|319440691|ref|ZP_07989847.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           variabile DSM 44702]
          Length = 335

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 21/149 (14%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  A+  + I+RD+++H  +      +    +P     E +  +     E   LE  Y+
Sbjct: 194 MMNTADMIRLILRDKAVHGYYSGYKYQRGLDAHPERV-AEMEDFTYRFTAELLALENEYS 252

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-----D 112
            +    G   L+    + ++ + A++    +G  P ++       P     E+I     D
Sbjct: 253 RDLYSLGS--LDYAGVDAFVHYNADKALMNLGYGPQYEDAAAGVEP-----EIIAALTPD 305

Query: 113 LKKEKNFFETRVTEYQQGAGL-----KWD 136
             +  +FF    + Y  G         WD
Sbjct: 306 SSETHDFFSGSGSSYVMGRAEVTEEDDWD 334


>gi|22125124|ref|NP_668547.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           KIM 10]
 gi|45442235|ref|NP_993774.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51597273|ref|YP_071464.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808370|ref|YP_652286.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Antiqua]
 gi|108811297|ref|YP_647064.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Nepal516]
 gi|145598906|ref|YP_001162982.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|149365457|ref|ZP_01887492.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           CA88-4125]
 gi|162420024|ref|YP_001607865.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|165925252|ref|ZP_02221084.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165939901|ref|ZP_02228439.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166008124|ref|ZP_02229022.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166212554|ref|ZP_02238589.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167398943|ref|ZP_02304467.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167421281|ref|ZP_02313034.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167423716|ref|ZP_02315469.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167468720|ref|ZP_02333424.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           FV-1]
 gi|170023362|ref|YP_001719867.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis YPIII]
 gi|186896377|ref|YP_001873489.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929725|ref|YP_002347600.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           CO92]
 gi|229838202|ref|ZP_04458361.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229895452|ref|ZP_04510624.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis Pestoides A]
 gi|229898686|ref|ZP_04513831.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229901543|ref|ZP_04516665.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           Nepal516]
 gi|270489729|ref|ZP_06206803.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294504447|ref|YP_003568509.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|21957983|gb|AAM84798.1|AE013726_1 ribonucleoside-diphosphate reductase 2, beta chain, frag [Yersinia
           pestis KIM 10]
 gi|45437099|gb|AAS62651.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51590555|emb|CAH22196.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774945|gb|ABG17464.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Yersinia pestis Nepal516]
 gi|108780283|gb|ABG14341.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Yersinia pestis Antiqua]
 gi|115348336|emb|CAL21269.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           CO92]
 gi|145210602|gb|ABP40009.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Yersinia pestis Pestoides F]
 gi|149291870|gb|EDM41944.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           CA88-4125]
 gi|162352839|gb|ABX86787.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|165912120|gb|EDR30759.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922859|gb|EDR40010.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165992506|gb|EDR44807.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166206485|gb|EDR50965.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166960770|gb|EDR56791.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167051447|gb|EDR62855.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057886|gb|EDR67632.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169749896|gb|ACA67414.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis
           YPIII]
 gi|186699403|gb|ACC90032.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+]
 gi|229681472|gb|EEO77566.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           Nepal516]
 gi|229688234|gb|EEO80305.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229694568|gb|EEO84615.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229701607|gb|EEO89634.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis Pestoides A]
 gi|262362562|gb|ACY59283.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D106004]
 gi|262366433|gb|ACY62990.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D182038]
 gi|270338233|gb|EFA49010.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294354906|gb|ADE65247.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|320016142|gb|ADV99713.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 323

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 56/144 (38%), Gaps = 17/144 (11%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L +    E+ Y  + 
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLGKIDSAHRQEIKNFAFDLLQDLYDNEVRYTEDL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
                VG      ++++ + AN+    +G E LF  ++     +S  I      +  +  
Sbjct: 245 Y--DHVGWT-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENH 298

Query: 118 NFFETRVTEYQQGAGL-----KWD 136
           +FF    + Y  G  +      WD
Sbjct: 299 DFFSGSGSSYVIGKAVNTEDEDWD 322


>gi|295397108|ref|ZP_06807219.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
 gi|294974650|gb|EFG50366.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
          Length = 338

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 14/127 (11%)

Query: 1   MVGIAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           +  +AE  + I+RDES+H  +         NQ+ I+       E +     +L +    E
Sbjct: 197 LENVAEIIKLIIRDESVHGTYLGYKFQLGYNQLSIDE----QNELKDWMYALLFDLMENE 252

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK--YTENPFPWMSEVIDLK 114
             Y  E   +  VG        ++ + AN+    +G EP +     EN  P +   I   
Sbjct: 253 EKYTEEIYTQ--VGWTKE-VNTFVHYNANKALQNLGFEPFYPDGTAENVNPIVMNGISTD 309

Query: 115 KEK-NFF 120
               +FF
Sbjct: 310 SSNHDFF 316


>gi|184154755|ref|YP_001843095.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           fermentum IFO 3956]
 gi|260663216|ref|ZP_05864108.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|183226099|dbj|BAG26615.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum IFO 3956]
 gi|260552408|gb|EEX25459.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|299782855|gb|ADJ40853.1| Ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum CECT 5716]
          Length = 333

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          +      ++ ++     L+E    E  Y H  
Sbjct: 183 VAEIIKLILRDESVHGTYIGYKFQVGMNQLTEKQQQDMKRWMYDFLYELYDNEEKYTHVL 242

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                +G        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 243 Y--DQIGWT-DDVLVFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTTTSNHDFF 298


>gi|296117839|ref|ZP_06836422.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295969070|gb|EFG82312.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 328

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 12/140 (8%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
           A+  + I+RDE++H  +           N        Q +   +L +    E  +     
Sbjct: 192 ADIIRLIIRDEAIHGYYIGYKYQNYLK-NDKARHAANQDEIVDLLLDLYDNESHFTEAVY 250

Query: 65  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVI-DLKKEKNFFE 121
               +G      + ++++ AN+  + +G E +F   E  F    M+ +     +  +FF 
Sbjct: 251 --DQIGWT-EDVKAFLRYNANKAMNNLGYEAIFPQEECKFNAGVMTSLDPSANENHDFFS 307

Query: 122 TRVTEYQQGAGLK-----WD 136
              + Y  G   +     WD
Sbjct: 308 GSGSSYVIGKAEETTDDDWD 327


>gi|331648397|ref|ZP_08349485.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
 gi|331042144|gb|EGI14286.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
          Length = 319

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISQTRREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|227514022|ref|ZP_03944071.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
 gi|227087608|gb|EEI22920.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
          Length = 333

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          +      ++ ++     L+E    E  Y H  
Sbjct: 183 VAEIIKLILRDESVHGTYIGYKFQVGMNQLTEKQQQDMKRWMYDFLYELYDNEEKYTHVL 242

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                +G        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 243 Y--DQIGWT-DDVLVFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTTTSNHDFF 298


>gi|281179683|dbj|BAI56013.1| ribonucleoside-diphosphate reductase beta subunit [Escherichia coli
           SE15]
          Length = 319

 Score = 52.3 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|213966196|ref|ZP_03394381.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
 gi|213951131|gb|EEB62528.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
          Length = 334

 Score = 51.9 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 53/144 (36%), Gaps = 17/144 (11%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +          ++ +     +L E   LE+ Y+   
Sbjct: 196 TADMVRLILRDKAVHGYYSGYKFQRGVETYDTATQRQMKAFVFELLDELYQLELRYSEAL 255

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
                +GL       ++++ AN+    +G    F + E  F    E++        +   
Sbjct: 256 Y--QPLGL-YDDVANFIRYNANKALMNLGYPQRFNHDETAFK--PEILAALTPGSDENH- 309

Query: 118 NFFETRVTEYQQG-----AGLKWD 136
           +FF    + Y  G     A   WD
Sbjct: 310 DFFSGSGSAYVIGKAEDTADEDWD 333


>gi|311992719|ref|YP_004009587.1| NrdB ribonucleotide reductase beta subunit [Acinetobacter phage
           Ac42]
 gi|298684502|gb|ADI96463.1| NrdB ribonucleotide reductase beta subunit [Acinetobacter phage
           Ac42]
          Length = 372

 Score = 51.9 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 11/136 (8%)

Query: 4   IAEQYQYIMRDE-SLHLNFGIDVINQIKI-ENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
           I    + I +DE  +H  + ++V+ ++   E+      + + K   +L E    EI +A 
Sbjct: 222 IGSAVKKICQDEFEIHCEYRLEVLKELLASEHGQAAFAKLRPKMIKILKEVIESEITWAK 281

Query: 62  ETMPKG--FVGLNAPSCEQYMQFIANRRCHQIGLEP-----LFKYTENPFPWMSEVIDLK 114
                G   VG+NA    Q+  F A       G        +F   ENP P +   I++ 
Sbjct: 282 FLFEDGQAIVGMNADVLIQWALFNAKAVAQNFGFTEEELGFVFP-EENPMPHLESWININ 340

Query: 115 KEKNF-FETRVTEYQQ 129
           K +N   ET    Y+ 
Sbjct: 341 KTQNANQETVNGAYKV 356


>gi|222150734|ref|YP_002559887.1| ribonucleoside-diphosphate reductase minor subunit [Macrococcus
           caseolyticus JCSC5402]
 gi|222119856|dbj|BAH17191.1| ribonucleoside-diphosphate reductase minor subunit [Macrococcus
           caseolyticus JCSC5402]
          Length = 322

 Score = 51.9 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 7/122 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M    E  + I+ DES+H  F       ++ E          ++   +L E    E +Y 
Sbjct: 181 MTTSGEIIRKILLDESIHGVFTGLDAQSLRNEMTEDEKIRADKEMYDLLKELYANEESYT 240

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
                +  VGL       Y+Q+  N+    +G EP F+    NP   +   ++   +  +
Sbjct: 241 KMLYDR--VGLT-EDVLNYVQYNGNKALANLGFEPYFEEKGFNPI--IENALNTSTKNHD 295

Query: 119 FF 120
           FF
Sbjct: 296 FF 297


>gi|329769048|ref|ZP_08260470.1| ribonucleoside-diphosphate reductase [Gemella sanguinis M325]
 gi|328839539|gb|EGF89115.1| ribonucleoside-diphosphate reductase [Gemella sanguinis M325]
          Length = 322

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 54/137 (39%), Gaps = 15/137 (10%)

Query: 4   IAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
             E  + I+ DE++H +F      ++   +  E      KE       +L +    E+ Y
Sbjct: 185 SGEIIRKILLDETIHGSFTGFDAQEIFKTLTKEEQEKAKKEM----YKLLLDLYENELKY 240

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK- 117
             +   +  +GL     + Y+++ ANR    +G    F+  + NP   +   ++   +  
Sbjct: 241 TQDIYGE--IGL-YDEVKDYVEYNANRALANLGYPGYFEDKDINPI--IENAMNTSTKNH 295

Query: 118 NFFETRVTEYQQGAGLK 134
           +FF  +   Y     ++
Sbjct: 296 DFFSVKGDGYVVSMNVE 312


>gi|170765644|ref|ZP_02900455.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
 gi|170124790|gb|EDS93721.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
          Length = 319

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 14/138 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWT--KEFQQKSRTMLHEATLLEIAYAH 61
            A+  + I+RDE++H  +        K +     T  +E ++ +  +L E    E+ Y  
Sbjct: 181 TADLIRLIIRDEAVHGYYIG--YKHQKNQEKISLTQREELKRFAFDLLLELYDNELQYTD 238

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN 118
           E   +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N
Sbjct: 239 ELYAETTW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAKVNPA--ILAALSPNADEN 293

Query: 119 --FFETRVTEYQQGAGLK 134
             FF    + Y  G  ++
Sbjct: 294 HDFFSGSGSSYVMGKAVE 311


>gi|25027435|ref|NP_737489.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           efficiens YS-314]
 gi|259506419|ref|ZP_05749321.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
 gi|23492716|dbj|BAC17689.1| putative ribonucleotide reductase [Corynebacterium efficiens
           YS-314]
 gi|259165992|gb|EEW50546.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
          Length = 339

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +               ++  +L +    E+ Y    
Sbjct: 201 TADVIRLIIRDEAIHGYYIGYKYQKHIATLSPEKQATNHDEAVELLLDLYDNELEYTRHV 260

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP--WMSEVI-DLKKEKNFF 120
                +G +      ++++ AN+    +G E +F   +  F    M+ +     +  +FF
Sbjct: 261 YDD--LGWS-EDVSAFLRYNANKAMQNLGYESIFPVDQCKFDPGVMTSLDPSSNENHDFF 317

Query: 121 ETRVTEYQQG-----AGLKWD 136
               + Y  G     +   WD
Sbjct: 318 SGSGSSYVIGDVEATSDEDWD 338


>gi|172041159|ref|YP_001800873.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           urealyticum DSM 7109]
 gi|171852463|emb|CAQ05439.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           urealyticum DSM 7109]
          Length = 331

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDES+H  +      +          +E +      L +    E+ Y    
Sbjct: 193 TADIIRLIIRDESVHGYYIGYKYQRALENESPERQEELKGFVVEQLLDLYDNEVEYTESI 252

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G + LF   E
Sbjct: 253 Y--DEIGWT-EDVKRFLRYNANKAMNNLGYDGLFPVEE 287


>gi|300934659|ref|ZP_07149915.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           resistens DSM 45100]
          Length = 332

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 4/98 (4%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      Q  +EN    T E  + +  +L +   LE+ Y+ E 
Sbjct: 195 TADMIRLILRDKAVHGYYSGYKF-QRGLENHPERTAELSEFTHALLEKLFELEVLYSAEL 253

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +GL  P   +++++ AN+    +G  P F   E
Sbjct: 254 YE--PLGL-MPDVVKFVKYNANKALMNLGYHPHFAAEE 288


>gi|312865304|ref|ZP_07725532.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
 gi|311099415|gb|EFQ57631.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
          Length = 316

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 10/122 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + ++RDES+H  +      Q   E       +FQ+     L E    E AY  E 
Sbjct: 178 LAELIKLVIRDESVHGTYLGYKFRQGFDELSPEDQADFQKWMYGFLDELLENEFAYTEEV 237

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-N 118
                +GL     + ++++ AN+    +G    F+       NP   +   I ++    +
Sbjct: 238 YSD--IGL-EDDIKTFVKYNANKSLQNMGFGIYFENATANDVNPI--VMNGISIETANHD 292

Query: 119 FF 120
           FF
Sbjct: 293 FF 294


>gi|215487997|ref|YP_002330428.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O127:H6 str. E2348/69]
 gi|215266069|emb|CAS10489.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli O127:H6 str. E2348/69]
          Length = 319

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|293415927|ref|ZP_06658567.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
 gi|291432116|gb|EFF05098.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
          Length = 319

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISQAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|307132178|ref|YP_003884194.1| ribonucleoside-diphosphate reductase 2, subunit beta, ferritin-like
           protein [Dickeya dadantii 3937]
 gi|306529707|gb|ADM99637.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Dickeya dadantii 3937]
          Length = 330

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q          ++ Q  +  +L      E+ Y HE 
Sbjct: 192 TADLIRLIIRDEAVHGYYIGYKYQQGLKRVGTQQQRDLQAFAYDLLQTLYDNEVDYTHEL 251

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                VG +     +++ + AN+    +G E LF       NP   +   +    E+N  
Sbjct: 252 YDD--VGWS-DDVVKFLHYNANKALMNLGYEALFPAGMTDVNPA--ILAALSPGAEENHD 306

Query: 119 FFETRVTEYQQGAGLK-----WD 136
           FF    + Y  G  ++     WD
Sbjct: 307 FFSGAGSSYVIGKAVETEDEDWD 329


>gi|300941043|ref|ZP_07155562.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
 gi|300454207|gb|EFK17700.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
          Length = 319

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISQAQREELKNFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|238796650|ref|ZP_04640156.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           mollaretii ATCC 43969]
 gi|238719381|gb|EEQ11191.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           mollaretii ATCC 43969]
          Length = 323

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 58/144 (40%), Gaps = 17/144 (11%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +  +   +E +  +  +L +    E+ Y  + 
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLEKVDNNRRQEIKNFAFDLLQDLYDNEVRYTEDL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
             K  VG      ++++ + AN+    +G E LF  ++     +S  I      +  +  
Sbjct: 245 YDK--VGWT-EDVKKFLHYNANKALMNLGYEALFPSSQAA---VSPAILAALSPNADENH 298

Query: 118 NFFETRVTEYQQGAGL-----KWD 136
           +FF    + Y  G  +      WD
Sbjct: 299 DFFSGSGSSYVIGKAVNTEDEDWD 322


>gi|238784826|ref|ZP_04628827.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           bercovieri ATCC 43970]
 gi|238714242|gb|EEQ06253.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           bercovieri ATCC 43970]
          Length = 323

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 17/144 (11%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +      +   +E +  +  +L +    E+ Y  + 
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLERVDNSRRQEIKNFAFDLLQDLYDNEVRYTEDL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
             K  VG      ++++ + AN+    +G E LF  ++     +S  I      +  +  
Sbjct: 245 YDK--VGWT-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENH 298

Query: 118 NFFETRVTEYQQGAGL-----KWD 136
           +FF    + Y  G  +      WD
Sbjct: 299 DFFSGSGSSYVIGKAVNTEDEDWD 322


>gi|116490256|ref|YP_809800.1| ribonucleotide-diphosphate reductase subunit beta [Oenococcus oeni
           PSU-1]
 gi|290889638|ref|ZP_06552728.1| hypothetical protein AWRIB429_0118 [Oenococcus oeni AWRIB429]
 gi|116090981|gb|ABJ56135.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Oenococcus oeni PSU-1]
 gi|290480836|gb|EFD89470.1| hypothetical protein AWRIB429_0118 [Oenococcus oeni AWRIB429]
          Length = 337

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 3/97 (3%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  +AE  + I+RDES+H  +          E      K+    +  +L++    E  Y 
Sbjct: 183 MANVAEIIKLIIRDESVHGTYIGYKFQLAYKELTEQEQKDLNSWAYDLLYDLYDNEEKYT 242

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF 97
           H  +              ++++  N+    +GLEP+F
Sbjct: 243 H-QLYDEIDWF--DDVMIFLRYNGNKALMNLGLEPMF 276


>gi|197284313|ref|YP_002150185.1| ribonucleotide-diphosphate reductase subunit beta [Proteus
           mirabilis HI4320]
 gi|194681800|emb|CAR41036.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
           HI4320]
          Length = 322

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 11/141 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +         +    L  +  +  + ++L +    E+ Y  + 
Sbjct: 184 TADLIRLIIRDEAVHGYYIGYKFQNQLLNKSSLEKQNIKDFAFSLLLDLYDNEVKYTEDL 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVI--DLKKEKNFF 120
                VG      ++++ + AN+    +G E LF     N  P +   +  D  +  +FF
Sbjct: 244 Y--DSVGWT-EDVKKFLHYNANKALMNLGYEALFPDEITNVSPAILSSLSPDANENHDFF 300

Query: 121 ETRVTEYQQGAGL-----KWD 136
               + Y  G  +      WD
Sbjct: 301 SGSGSSYVIGKTINTEDDDWD 321


>gi|283786769|ref|YP_003366634.1| ribonucleoside-diphosphate reductase 2 beta chain [Citrobacter
           rodentium ICC168]
 gi|282950223|emb|CBG89859.1| ribonucleoside-diphosphate reductase 2 beta chain [Citrobacter
           rodentium ICC168]
          Length = 319

 Score = 51.9 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   + P    ++ +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKGMEKLPDAAREDLKNFALDLLMELYDNEVRYTEEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
                    A   + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 241 YADTGH---AEDVQAFLCYNANKAMMNLGYEALFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|148543559|ref|YP_001270929.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri DSM 20016]
 gi|184152966|ref|YP_001841307.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri JCM 1112]
 gi|227363481|ref|ZP_03847603.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri MM2-3]
 gi|325681909|ref|ZP_08161427.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri MM4-1A]
 gi|148530593|gb|ABQ82592.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactobacillus reuteri DSM 20016]
 gi|183224310|dbj|BAG24827.1| ribonucleotide diphosphate reductase beta subunit [Lactobacillus
           reuteri JCM 1112]
 gi|227071495|gb|EEI09796.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri MM2-3]
 gi|324978553|gb|EGC15502.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri MM4-1A]
          Length = 339

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          +      ++ +      L+E    E  Y H  
Sbjct: 189 VAEIIKLILRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLL 248

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 249 Y--DQVGWT-DDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTSNHDFF 304


>gi|116494955|ref|YP_806689.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           casei ATCC 334]
 gi|191638466|ref|YP_001987632.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           casei BL23]
 gi|227535043|ref|ZP_03965092.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239631445|ref|ZP_04674476.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|116105105|gb|ABJ70247.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactobacillus casei ATCC 334]
 gi|190712768|emb|CAQ66774.1| Ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
           casei BL23]
 gi|227187358|gb|EEI67425.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239525910|gb|EEQ64911.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|327382498|gb|AEA53974.1| hypothetical protein LC2W_1641 [Lactobacillus casei LC2W]
 gi|327385696|gb|AEA57170.1| hypothetical protein LCBD_1674 [Lactobacillus casei BD-II]
          Length = 326

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 9/121 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    +  +     +L +    E  Y ++ 
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEAEQQTLKDWMYDLLFDLYENEEKYTNDL 239

Query: 64  MPKGFVGLN-APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNF 119
             K     N       ++++ AN+    +G E  F  T    NP   M+ +       +F
Sbjct: 240 YAKT----NWTDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDF 294

Query: 120 F 120
           F
Sbjct: 295 F 295


>gi|301066519|ref|YP_003788542.1| ribonucleotide reductase subunit beta [Lactobacillus casei str.
           Zhang]
 gi|300438926|gb|ADK18692.1| Ribonucleotide reductase, beta subunit [Lactobacillus casei str.
           Zhang]
          Length = 326

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 9/121 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E P    +  +     +L +    E  Y ++ 
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELPEAEQQTLKDWMYDLLFDLYENEEKYTNDL 239

Query: 64  MPKGFVGLN-APSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNF 119
             K     N       ++++ AN+    +G E  F  T    NP   M+ +       +F
Sbjct: 240 YAKT----NWTDEVLTFLRYNANKALMNLGQETAFPDTADDVNPIV-MNGISTSTANHDF 294

Query: 120 F 120
           F
Sbjct: 295 F 295


>gi|194468106|ref|ZP_03074092.1| Ribonucleoside-diphosphate reductase [Lactobacillus reuteri 100-23]
 gi|194452959|gb|EDX41857.1| Ribonucleoside-diphosphate reductase [Lactobacillus reuteri 100-23]
          Length = 339

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          +      ++ +      L+E    E  Y H  
Sbjct: 189 VAEIIKLILRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLL 248

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 249 Y--DQVGWT-DDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTSNHDFF 304


>gi|331701739|ref|YP_004398698.1| ribonucleoside-diphosphate reductase [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129082|gb|AEB73635.1| Ribonucleoside-diphosphate reductase [Lactobacillus buchneri NRRL
           B-30929]
          Length = 318

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 7/122 (5%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
             +AE  + I+RDES+H  +          + P    ++ +      L++    E  Y H
Sbjct: 179 PNVAEIIKLILRDESVHGTYIGYKFQIGYNQLPKEKQEDMKNWIYDFLYKLYGNEEKYTH 238

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKN 118
                   G        ++++ AN+    +G +PLF  T    NP   M+ +       +
Sbjct: 239 ILY--DQTGWT-EDVLTFIRYNANKALMNLGQDPLFPDTAEDVNPVV-MNGISTSTANHD 294

Query: 119 FF 120
           FF
Sbjct: 295 FF 296


>gi|227529511|ref|ZP_03959560.1| ribonucleoside-diphosphate reductase [Lactobacillus vaginalis ATCC
           49540]
 gi|227350596|gb|EEJ40887.1| ribonucleoside-diphosphate reductase [Lactobacillus vaginalis ATCC
           49540]
          Length = 339

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          +      ++ +      L+E    E  Y H  
Sbjct: 189 VAEIIKLILRDESVHGTYIGYKFQVGMHDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLL 248

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 249 Y--DQVGWT-EDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTANHDFF 304


>gi|331654159|ref|ZP_08355159.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
 gi|331047541|gb|EGI19618.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
          Length = 319

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKN 118
             +      A   + ++ + AN+    +G EPLF       NP     +S   D     +
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILTALSPNADENH--D 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|259502687|ref|ZP_05745589.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus antri DSM
           16041]
 gi|259169332|gb|EEW53827.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus antri DSM
           16041]
          Length = 339

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E      ++ +      L+E    E  Y H  
Sbjct: 189 VAEIIKLILRDESVHGTYVGYKFQVGLHERTEKQQQDMKDWMYNFLYELYDNEEKYTHLL 248

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
             K  +G        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 249 YDK--IGWT-DDVLTFIRYNANKALMNLGQDPLFPDTATDVNPVV-MNGISTSTSNHDFF 304


>gi|227545165|ref|ZP_03975214.1| ribonucleoside-diphosphate reductase [Lactobacillus reuteri
           CF48-3A]
 gi|300909160|ref|ZP_07126621.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri SD2112]
 gi|227184848|gb|EEI64919.1| ribonucleoside-diphosphate reductase [Lactobacillus reuteri
           CF48-3A]
 gi|300893025|gb|EFK86384.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri SD2112]
          Length = 339

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          +      ++ +      L+E    E  Y H  
Sbjct: 189 VAEIIKLILRDESVHGTYIGYKFQVGLRDRTEKQQQDMKDWMYNFLYELYDNEEKYTHLL 248

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                VG        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 249 Y--DQVGWT-DDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTSTSNHDFF 304


>gi|312965591|ref|ZP_07779821.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 2362-75]
 gi|312289740|gb|EFR17630.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 2362-75]
          Length = 319

 Score = 51.5 bits (123), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISQAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF +  + Y  G  ++
Sbjct: 296 FFSSSGSSYVMGKAVE 311


>gi|323359290|ref|YP_004225686.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum
           StLB037]
 gi|323275661|dbj|BAJ75806.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum
           StLB037]
          Length = 324

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 56/138 (40%), Gaps = 8/138 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           + +  + ++L+E    E+ Y    
Sbjct: 186 TADLIRLIIRDEAVHGYYIGYKFQRGLETVDQARRDDIKDYTFSLLYELYDNEVGYTQSL 245

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKKEKN--FF 120
                VGL+    ++++ + AN+    +G E +F  +  N  P +   +    ++N  FF
Sbjct: 246 Y--DAVGLS-EDVKKFLHYNANKALMNLGYEAMFPSSVTNVNPAILSALSPNADENHDFF 302

Query: 121 ETRVTEYQ--QGAGLKWD 136
               + Y   +    + D
Sbjct: 303 SGSGSSYVIGKAEATEDD 320


>gi|1395207|gb|AAB81405.1| ribonucleotide reductase R2-1 small subunit [Mycobacterium
           tuberculosis str. Erdman]
          Length = 321

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       + ++ +  +LH     EI YAH+ 
Sbjct: 183 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 242

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKN 118
                +G        YM++ AN+    +G +P F       NP   +   +D    +  +
Sbjct: 243 Y--DELGWT-DDVLPYMRYNANKALANLGYQPAFDRDTCQVNPA--VRAALDPGAGENHD 297

Query: 119 FFETRVTEYQQG-----AGLKWD 136
           FF    + Y  G         WD
Sbjct: 298 FFSGSGSSYVMGTHQPTTDTDWD 320


>gi|15841457|ref|NP_336494.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CDC1551]
 gi|57116932|ref|YP_177853.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Rv]
 gi|148661790|ref|YP_001283313.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|148823195|ref|YP_001287949.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis F11]
 gi|167970496|ref|ZP_02552773.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|215404217|ref|ZP_03416398.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|215411671|ref|ZP_03420467.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215427336|ref|ZP_03425255.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T92]
 gi|215430897|ref|ZP_03428816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|215446189|ref|ZP_03432941.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|218753694|ref|ZP_03532490.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis GM 1503]
 gi|219557941|ref|ZP_03537017.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T17]
 gi|253798971|ref|YP_003031972.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 1435]
 gi|254232151|ref|ZP_04925478.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis C]
 gi|254364798|ref|ZP_04980844.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254551002|ref|ZP_05141449.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
 gi|260186953|ref|ZP_05764427.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CPHL_A]
 gi|260201080|ref|ZP_05768571.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T46]
 gi|289443470|ref|ZP_06433214.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289447597|ref|ZP_06437341.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis CPHL_A]
 gi|289554242|ref|ZP_06443452.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 605]
 gi|289570077|ref|ZP_06450304.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T17]
 gi|289746076|ref|ZP_06505454.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289750559|ref|ZP_06509937.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T92]
 gi|289754082|ref|ZP_06513460.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289758093|ref|ZP_06517471.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|289762136|ref|ZP_06521514.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis GM 1503]
 gi|294996911|ref|ZP_06802602.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 210]
 gi|297634550|ref|ZP_06952330.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN 4207]
 gi|297731538|ref|ZP_06960656.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN R506]
 gi|298525478|ref|ZP_07012887.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306776213|ref|ZP_07414550.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu001]
 gi|306779994|ref|ZP_07418331.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu002]
 gi|306784744|ref|ZP_07423066.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu003]
 gi|306789101|ref|ZP_07427423.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu004]
 gi|306793436|ref|ZP_07431738.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu005]
 gi|306797819|ref|ZP_07436121.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu006]
 gi|306803700|ref|ZP_07440368.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu008]
 gi|306808274|ref|ZP_07444942.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu007]
 gi|306968097|ref|ZP_07480758.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu009]
 gi|306972322|ref|ZP_07484983.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu010]
 gi|307080033|ref|ZP_07489203.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu011]
 gi|307084607|ref|ZP_07493720.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu012]
 gi|313658871|ref|ZP_07815751.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN V2475]
 gi|1710397|sp|Q10840|RIR2A_MYCTU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta
           nrdF1; AltName: Full=Ribonucleotide reductase R2-1 small
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit 1
 gi|13881697|gb|AAK46308.1| ribonucleoside-diphosphate reductase R2-1, beta subunit
           [Mycobacterium tuberculosis CDC1551]
 gi|38490297|emb|CAE55444.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium tuberculosis H37Rv]
 gi|124601210|gb|EAY60220.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis C]
 gi|134150312|gb|EBA42357.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148505942|gb|ABQ73751.1| ribonucleoside-diphosphate reductase subunit beta NrdF1
           [Mycobacterium tuberculosis H37Ra]
 gi|148721722|gb|ABR06347.1| ribonucleoside-diphosphate reductase beta subunit nrdF1
           [Mycobacterium tuberculosis F11]
 gi|253320474|gb|ACT25077.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 1435]
 gi|289416389|gb|EFD13629.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289420555|gb|EFD17756.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis CPHL_A]
 gi|289438874|gb|EFD21367.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 605]
 gi|289543831|gb|EFD47479.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T17]
 gi|289686604|gb|EFD54092.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289691146|gb|EFD58575.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T92]
 gi|289694669|gb|EFD62098.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289709642|gb|EFD73658.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis GM 1503]
 gi|289713657|gb|EFD77669.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|298495272|gb|EFI30566.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308215325|gb|EFO74724.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu001]
 gi|308327098|gb|EFP15949.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu002]
 gi|308330477|gb|EFP19328.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu003]
 gi|308334311|gb|EFP23162.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu004]
 gi|308338113|gb|EFP26964.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu005]
 gi|308341805|gb|EFP30656.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu006]
 gi|308345291|gb|EFP34142.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu007]
 gi|308349595|gb|EFP38446.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu008]
 gi|308354222|gb|EFP43073.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu009]
 gi|308358200|gb|EFP47051.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu010]
 gi|308362132|gb|EFP50983.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu011]
 gi|308365786|gb|EFP54637.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu012]
 gi|323719468|gb|EGB28595.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis CDC1551A]
 gi|326903590|gb|EGE50523.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis W-148]
 gi|328458726|gb|AEB04149.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 4207]
          Length = 322

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       + ++ +  +LH     EI YAH+ 
Sbjct: 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKN 118
                +G        YM++ AN+    +G +P F       NP   +   +D    +  +
Sbjct: 244 Y--DELGWT-DDVLPYMRYNANKALANLGYQPAFDRDTCQVNPA--VRAALDPGAGENHD 298

Query: 119 FFETRVTEYQQG-----AGLKWD 136
           FF    + Y  G         WD
Sbjct: 299 FFSGSGSSYVMGTHQPTTDTDWD 321


>gi|306812443|ref|ZP_07446641.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|222034376|emb|CAP77117.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli LF82]
 gi|305854481|gb|EFM54919.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|312947211|gb|ADR28038.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O83:H1 str. NRG 857C]
          Length = 319

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      +   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|31793160|ref|NP_855653.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis AF2122/97]
 gi|224990358|ref|YP_002645045.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|260205258|ref|ZP_05772749.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis K85]
 gi|289574653|ref|ZP_06454880.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis K85]
 gi|31618751|emb|CAD94705.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium bovis AF2122/97]
 gi|224773471|dbj|BAH26277.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|289539084|gb|EFD43662.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis K85]
          Length = 322

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       + ++ +  +LH     EI YAH+ 
Sbjct: 184 TADLIRLIIRDEAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDL 243

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVID--LKKEKN 118
                +G        YM++ AN+    +G +P F       NP   +   +D    +  +
Sbjct: 244 Y--DELGWT-DDVLPYMRYNANKALANLGYQPAFDRDTCQVNPA--VRAALDPGAGENHD 298

Query: 119 FFETRVTEYQQG-----AGLKWD 136
           FF    + Y  G         WD
Sbjct: 299 FFSGSGSSYVMGTHQPTTDTDWD 321


>gi|26249071|ref|NP_755111.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           CFT073]
 gi|227888210|ref|ZP_04006015.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           83972]
 gi|300986153|ref|ZP_07177743.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|301050518|ref|ZP_07197394.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|26109478|gb|AAN81681.1|AE016765_83 Ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           CFT073]
 gi|227834850|gb|EEJ45316.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           83972]
 gi|300297774|gb|EFJ54159.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|300407907|gb|EFJ91445.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|307554652|gb|ADN47427.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           ABU 83972]
 gi|315290985|gb|EFU50350.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 153-1]
          Length = 319

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A     ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVTAFLCYNANKALMNLGYEPLFPAGMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|291284009|ref|YP_003500827.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli O55:H7 str. CB9615]
 gi|290763882|gb|ADD57843.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli O55:H7 str. CB9615]
          Length = 319

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISPGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|188533084|ref|YP_001906881.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           tasmaniensis Et1/99]
 gi|188028126|emb|CAO95983.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           tasmaniensis Et1/99]
          Length = 319

 Score = 51.5 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 59/143 (41%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I++DE++H  +      +   +      +E QQ +  +L E    E+AY  E 
Sbjct: 181 TADLIRLIIKDEAVHGYYIGYKYQKSLEKETAPRKEELQQFAIDLLLELYENEVAY-TEA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
           +  G  G      ++++ + AN+    +G + LF       NP   +   +    ++N  
Sbjct: 240 LYAGV-GW-QEDVKKFLHYNANKALMNLGYQALFPSYMTDVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK-----WD 136
           FF    + Y  G  ++     WD
Sbjct: 296 FFSGSGSSYVMGKAVETEDEDWD 318


>gi|325496274|gb|EGC94133.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ECD227]
          Length = 319

 Score = 51.2 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLGKTSLEQREELKNFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|320194816|gb|EFW69445.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           WV_060327]
          Length = 319

 Score = 51.2 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISQEQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      +   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|238790129|ref|ZP_04633906.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           frederiksenii ATCC 33641]
 gi|238721798|gb|EEQ13461.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           frederiksenii ATCC 33641]
          Length = 323

 Score = 51.2 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 54/137 (39%), Gaps = 12/137 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +      +   +E +  +  +L +    E+ Y  + 
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLERVDNNRRQEIKNFAFDLLQDLYDNEVRYTEDL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
                VG      ++++ + AN+    +G E LF  ++     +S  I      +  +  
Sbjct: 245 YDD--VGWT-EDVKKFLHYNANKALMNLGYEALFPASQAA---VSPAILAALSPNADENH 298

Query: 118 NFFETRVTEYQQGAGLK 134
           +FF    + Y  G  + 
Sbjct: 299 DFFSGSGSSYVIGKAVS 315


>gi|91212037|ref|YP_542023.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UTI89]
 gi|117624912|ref|YP_853853.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           APEC O1]
 gi|218559668|ref|YP_002392581.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           S88]
 gi|237706702|ref|ZP_04537183.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|91073611|gb|ABE08492.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           UTI89]
 gi|115514036|gb|ABJ02111.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           APEC O1]
 gi|218366437|emb|CAR04189.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli S88]
 gi|226899742|gb|EEH86001.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|294492274|gb|ADE91030.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli IHE3034]
 gi|315284934|gb|EFU44379.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 110-3]
 gi|323951102|gb|EGB46978.1| ribonucleotide reductase [Escherichia coli H252]
 gi|323957111|gb|EGB52836.1| ribonucleotide reductase [Escherichia coli H263]
          Length = 319

 Score = 51.2 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      + + +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNQEKISQAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      +   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|110642801|ref|YP_670531.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           536]
 gi|191171432|ref|ZP_03032981.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|300990601|ref|ZP_07179251.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|110344393|gb|ABG70630.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           536]
 gi|190908366|gb|EDV67956.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|300305718|gb|EFJ60238.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|324014406|gb|EGB83625.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 60-1]
          Length = 319

 Score = 51.2 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISQEQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      +   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|218547807|ref|YP_002381598.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ATCC 35469]
 gi|218355348|emb|CAQ87955.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia fergusonii ATCC 35469]
          Length = 319

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETTW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|331658787|ref|ZP_08359729.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
 gi|315298701|gb|EFU57955.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 16-3]
 gi|331053369|gb|EGI25398.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
          Length = 319

 Score = 51.2 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|324111310|gb|EGC05292.1| ribonucleotide reductase [Escherichia fergusonii B253]
          Length = 319

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|325284717|ref|YP_004264180.1| Ribonucleoside-diphosphate reductase [Deinococcus proteolyticus
           MRP]
 gi|324316206|gb|ADY27320.1| Ribonucleoside-diphosphate reductase [Deinococcus proteolyticus
           MRP]
          Length = 348

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 7/131 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV   E +  I+ DE++H  +   +  +   E                L +    E+AY 
Sbjct: 185 MVSAGEIFNLIIMDEAVHGVYVALLAQEKFAEMNEAEQAYALAWYEETLMKLYRNELAYT 244

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
                   VGL     ++++++  N     +G+E  F+  E NP   +   I  K    +
Sbjct: 245 EMLYAD--VGL-VDEVKKFIRYNCNVLADNLGVERSFEDEEINPI--VRNGIKAKGTTHD 299

Query: 119 FFETRVTEYQQ 129
           FF  +   Y +
Sbjct: 300 FFSAKGNSYAK 310


>gi|307625752|gb|ADN70056.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UM146]
          Length = 319

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      + + +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNQEKISQAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      +   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---SDDVKAFLCYNANKVLMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|270265355|ref|ZP_06193616.1| ribonucleoside-diphosphate reductase 2 subunit beta [Serratia
           odorifera 4Rx13]
 gi|270040759|gb|EFA13862.1| ribonucleoside-diphosphate reductase 2 subunit beta [Serratia
           odorifera 4Rx13]
          Length = 323

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E 
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLEKVDATRRQQVKNFAFDLLQDLYDNEVRYTEEL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VG      + ++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 245 Y--DGVGWT-EDVKTFLHYNANKALMNLGYEALFPPAMAEVNPAILSALSPNADENH--D 299

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 300 FFSGSGSSYVIGKAVNTEDEDWD 322


>gi|218701171|ref|YP_002408800.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI39]
 gi|218371157|emb|CAR18988.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli IAI39]
          Length = 319

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|238759171|ref|ZP_04620339.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia aldovae
           ATCC 35236]
 gi|238702587|gb|EEP95136.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia aldovae
           ATCC 35236]
          Length = 323

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 17/144 (11%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +  +    E +  +  +L +    E+ Y  + 
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLEKVDNARRLEIKNFAFDLLQDLYDNEVRYTEDL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
             K  VG      ++++ + AN+    +G E LF  ++     +S  I      +  +  
Sbjct: 245 YDK--VGWT-EDVKKFLHYNANKALMNLGYEALFPISQAA---VSPAILAALSPNADENH 298

Query: 118 NFFETRVTEYQQGAGL-----KWD 136
           +FF    + Y  G  +      WD
Sbjct: 299 DFFSGSGSSYVIGKAVNTEDEDWD 322


>gi|116333244|ref|YP_794771.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           brevis ATCC 367]
 gi|116098591|gb|ABJ63740.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactobacillus brevis ATCC 367]
          Length = 331

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 3/97 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E      ++ +      L++    E  Y H  
Sbjct: 183 VAEIIKLILRDESVHGTYIGYKFQLGMKELTDAEQQQMKDWMYDFLYQLYDNEEKYTHTL 242

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT 100
                +G        ++++ AN+    +G +PLF  T
Sbjct: 243 Y--DQIGWT-EKVLTFIRYNANKALMNLGQDPLFPDT 276


>gi|81428551|ref|YP_395551.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           sakei subsp. sakei 23K]
 gi|78610193|emb|CAI55242.1| Ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
           sakei subsp. sakei 23K]
          Length = 318

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 6/103 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E      +E Q     +L++    E  Y HE 
Sbjct: 180 VAEIIKLIIRDESVHGTYIGYKFQLGFNELAKAEQEELQNWMYDLLYDLYANEEKYTHEV 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 103
                 G        Y+++ AN+    +G   LF  T    NP
Sbjct: 240 Y--DGTGWT-EEVLTYLRYNANKALMNLGQGALFPDTAEDVNP 279


>gi|293412034|ref|ZP_06654757.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|291468805|gb|EFF11296.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
          Length = 319

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|157371959|ref|YP_001479948.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           proteamaculans 568]
 gi|157323723|gb|ABV42820.1| Ribonucleoside-diphosphate reductase [Serratia proteamaculans 568]
          Length = 323

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E 
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLEKVDAARRQQVKNFAFDLLQDLYDNEVRYTEEL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VG      + ++ + AN+    +G E LF  +    NP     +S   D     +
Sbjct: 245 Y--DGVGWT-EDVKTFLHYNANKALMNLGYEALFPPSMAEVNPAILSALSPNADENH--D 299

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 300 FFSGSGSSYVIGKAVNTEDDDWD 322


>gi|283835589|ref|ZP_06355330.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
 gi|291068801|gb|EFE06910.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
          Length = 319

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKGLAHISESAREELKNFALDLLMELYDNEAQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G E LF       NP   +   +    E+N  
Sbjct: 241 YAETGW---ADDVKAFLCYNANKALMNLGYEALFPPEMAEVNPA--ILAALSPNAEENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|57867410|ref|YP_189075.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis RP62A]
 gi|57638068|gb|AAW54856.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus epidermidis RP62A]
          Length = 340

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 15/126 (11%)

Query: 1   MVGIAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           MV   E  + I+ DE++H +        + ++   E       + +++   +  +    E
Sbjct: 187 MVHSGEIIRKIILDETIHGSGTGYAAQVIFDKFSKEEQE----DIRKELMELFDQLYFNE 242

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 116
           + YA     K  +GL      +Y+Q+  NR    +G E +F     PF  + E       
Sbjct: 243 VEYAASLYDK--LGLT-EDVIRYIQYNGNRALMNLGWETVFN--PEPFNPIVENGLRTDT 297

Query: 117 KN--FF 120
            N  FF
Sbjct: 298 TNHDFF 303


>gi|170684037|ref|YP_001744827.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SMS-3-5]
 gi|170521755|gb|ACB19933.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli SMS-3-5]
          Length = 319

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKKLEKISLAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      +   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|191167101|ref|ZP_03028922.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|260856787|ref|YP_003230678.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|309795135|ref|ZP_07689554.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|331664233|ref|ZP_08365139.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
 gi|190902883|gb|EDV62611.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|257755436|dbj|BAI26938.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|308121106|gb|EFO58368.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|323154887|gb|EFZ41079.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli EPECa14]
 gi|331058164|gb|EGI30145.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
          Length = 319

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|323941488|gb|EGB37671.1| ribonucleotide reductase [Escherichia coli E482]
          Length = 319

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|70926559|ref|XP_735800.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56509782|emb|CAH82994.1| hypothetical protein PC300265.00.0 [Plasmodium chabaudi chabaudi]
          Length = 106

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 4/86 (4%)

Query: 35  HLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLE 94
           HL  K  + +       A  LE  +  E +    + +     +Q++Q++A+     +   
Sbjct: 2   HLNNK-LKYEVLDYFKTAVDLEYNFCVEMLDFDSLKITKDQVKQFLQYLADTMLVNLKYS 60

Query: 95  PLFKYTENPFPW--MSEVIDLKKEKN 118
             +  ++ PF W   S++I  +  KN
Sbjct: 61  KHYN-SKYPFTWKEFSKIIVSENAKN 85


>gi|15803196|ref|NP_289228.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 EDL933]
 gi|15832793|ref|NP_311566.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. Sakai]
 gi|168750919|ref|ZP_02775941.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|168755421|ref|ZP_02780428.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|168762471|ref|ZP_02787478.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|168768767|ref|ZP_02793774.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|168774792|ref|ZP_02799799.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|168778658|ref|ZP_02803665.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|168787931|ref|ZP_02812938.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|168800561|ref|ZP_02825568.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|195938430|ref|ZP_03083812.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808703|ref|ZP_03251040.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208813382|ref|ZP_03254711.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208819985|ref|ZP_03260305.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209400851|ref|YP_002272142.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|217327155|ref|ZP_03443238.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|254794623|ref|YP_003079460.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. TW14359]
 gi|261225973|ref|ZP_05940254.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256769|ref|ZP_05949302.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. FRIK966]
 gi|12517115|gb|AAG57786.1|AE005496_9 ribonucleoside-diphosphate reductase 2, beta chain [Escherichia
           coli O157:H7 str. EDL933]
 gi|13363010|dbj|BAB36962.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           O157:H7 str. Sakai]
 gi|187769524|gb|EDU33368.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|188015002|gb|EDU53124.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|189003218|gb|EDU72204.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|189357305|gb|EDU75724.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|189362069|gb|EDU80488.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|189367242|gb|EDU85658.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|189372097|gb|EDU90513.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|189377142|gb|EDU95558.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|208728504|gb|EDZ78105.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208734659|gb|EDZ83346.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208740108|gb|EDZ87790.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209162251|gb|ACI39684.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|209762240|gb|ACI79432.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|209762242|gb|ACI79433.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|209762246|gb|ACI79435.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|217319522|gb|EEC27947.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|254594023|gb|ACT73384.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|320189007|gb|EFW63666.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC1212]
 gi|320640665|gb|EFX10201.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. G5101]
 gi|326338609|gb|EGD62435.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1044]
 gi|326342863|gb|EGD66631.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1125]
          Length = 319

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|16130590|ref|NP_417162.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|74313247|ref|YP_311666.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sonnei
           Ss046]
 gi|89109469|ref|AP_003249.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli str. K-12 substr. W3110]
 gi|157162127|ref|YP_001459445.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           HS]
 gi|170019072|ref|YP_001724026.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ATCC 8739]
 gi|170082262|ref|YP_001731582.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188492563|ref|ZP_02999833.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|193065983|ref|ZP_03047042.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
 gi|193070996|ref|ZP_03051924.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|194427830|ref|ZP_03060376.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194439440|ref|ZP_03071516.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|209920120|ref|YP_002294204.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SE11]
 gi|218696273|ref|YP_002403940.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           55989]
 gi|238901820|ref|YP_002927616.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|256019542|ref|ZP_05433407.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
 gi|256024812|ref|ZP_05438677.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           4_1_40B]
 gi|260845324|ref|YP_003223102.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|293448994|ref|ZP_06663415.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|300906827|ref|ZP_07124508.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300916824|ref|ZP_07133528.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300922750|ref|ZP_07138839.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|300930529|ref|ZP_07145925.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|300949072|ref|ZP_07163119.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|300957447|ref|ZP_07169660.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|301026690|ref|ZP_07190101.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|301306007|ref|ZP_07212087.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|301327384|ref|ZP_07220633.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|301645345|ref|ZP_07245292.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|307139368|ref|ZP_07498724.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           H736]
 gi|307314435|ref|ZP_07594040.1| Ribonucleoside-diphosphate reductase [Escherichia coli W]
 gi|312973113|ref|ZP_07787286.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 1827-70]
 gi|331643364|ref|ZP_08344495.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
 gi|331669414|ref|ZP_08370260.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331678654|ref|ZP_08379328.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|2507306|sp|P37146|RIR4_ECOLI RecName: Full=Ribonucleoside-diphosphate reductase 2 subunit beta;
           AltName: Full=R2F protein; AltName: Full=Ribonucleotide
           reductase 2
 gi|303325061|pdb|3N37|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli
 gi|303325062|pdb|3N38|A Chain A, Ribonucleotide Reductase Nrdf From Escherichia Coli Soaked
           With Ferrous Ions
 gi|303325063|pdb|3N39|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Nrdi
 gi|303325065|pdb|3N39|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Nrdi
 gi|303325067|pdb|3N3A|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Reduced Nrdi
 gi|303325069|pdb|3N3A|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Reduced Nrdi
 gi|303325071|pdb|3N3B|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Reduced Nrdi With A
           Trapped Peroxide
 gi|303325073|pdb|3N3B|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Reduced Nrdi With A
           Trapped Peroxide
 gi|1789031|gb|AAC75723.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|1800064|dbj|BAA16541.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli str. K12 substr. W3110]
 gi|73856724|gb|AAZ89431.1| ribonucleoside-diphosphate reductase 2, beta chain, frag [Shigella
           sonnei Ss046]
 gi|157067807|gb|ABV07062.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli HS]
 gi|169754000|gb|ACA76699.1| Ribonucleoside-diphosphate reductase [Escherichia coli ATCC 8739]
 gi|169890097|gb|ACB03804.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188487762|gb|EDU62865.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|192926397|gb|EDV81032.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
 gi|192955654|gb|EDV86129.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|194414063|gb|EDX30339.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194421616|gb|EDX37627.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|209762244|gb|ACI79434.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|209913379|dbj|BAG78453.1| ribonucleoside-diphosphate reductase beta subunit [Escherichia coli
           SE11]
 gi|218353005|emb|CAU98821.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli 55989]
 gi|238863480|gb|ACR65478.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|257760471|dbj|BAI31968.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|291322084|gb|EFE61513.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|299879612|gb|EFI87823.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|300315803|gb|EFJ65587.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|300401428|gb|EFJ84966.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300415890|gb|EFJ99200.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300420935|gb|EFK04246.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|300451458|gb|EFK15078.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|300461585|gb|EFK25078.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|300838718|gb|EFK66478.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|300846038|gb|EFK73798.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|301076379|gb|EFK91185.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|306906003|gb|EFN36524.1| Ribonucleoside-diphosphate reductase [Escherichia coli W]
 gi|309703041|emb|CBJ02373.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           ETEC H10407]
 gi|310333055|gb|EFQ00269.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 1827-70]
 gi|315061957|gb|ADT76284.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli W]
 gi|315254452|gb|EFU34420.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 85-1]
 gi|315615063|gb|EFU95700.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 3431]
 gi|320198428|gb|EFW73030.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           EC4100B]
 gi|320656721|gb|EFX24609.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320662264|gb|EFX29661.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320667315|gb|EFX34273.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323173041|gb|EFZ58672.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli LT-68]
 gi|323183202|gb|EFZ68599.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 1357]
 gi|323377462|gb|ADX49730.1| Ribonucleoside-diphosphate reductase [Escherichia coli KO11]
 gi|323935630|gb|EGB31947.1| ribonucleotide reductase [Escherichia coli E1520]
 gi|323946352|gb|EGB42381.1| ribonucleotide reductase [Escherichia coli H120]
 gi|323960578|gb|EGB56205.1| ribonucleotide reductase [Escherichia coli H489]
 gi|323971479|gb|EGB66714.1| ribonucleotide reductase [Escherichia coli TA007]
 gi|324020305|gb|EGB89524.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 117-3]
 gi|324120035|gb|EGC13912.1| ribonucleotide reductase [Escherichia coli E1167]
 gi|331036835|gb|EGI09059.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
 gi|331063082|gb|EGI34995.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331073484|gb|EGI44805.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|332103018|gb|EGJ06364.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
          Length = 319

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|256848140|ref|ZP_05553584.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           coleohominis 101-4-CHN]
 gi|256715200|gb|EEU30177.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           coleohominis 101-4-CHN]
          Length = 333

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          +      ++ +      L+E    E  Y H  
Sbjct: 183 VAEIIKLILRDESVHGTYIGYKFQVGMRQLTEKQQQDMKDWMYNFLYELYDNEGNYTHLL 242

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEKNFF 120
                +G        ++++ AN+    +G +PLF  T    NP   M+ +       +FF
Sbjct: 243 Y--DQIGWT-DDVLTFIRYNANKALMNLGQDPLFPDTASDVNPVV-MNGISTTTSNHDFF 298


>gi|228904848|ref|ZP_04068902.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
 gi|228854862|gb|EEM99466.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
          Length = 343

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 55/140 (39%), Gaps = 18/140 (12%)

Query: 4   IAEQYQYIMRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
             E    I+RDE++H      F  ++      E      +E  +++  +L      E+ Y
Sbjct: 196 SGEIIALILRDEAIHGVTGGIFAQEIYENQLTE---AEQQEVDKEAIQLLEMLYANELDY 252

Query: 60  AHET---MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKK 115
            ++    + K  +        +++++ AN+    +G +  F     NP   +   +  K 
Sbjct: 253 TNDVYAPLGKDMI----EEVNKFLRYNANKAMMNLGYDQYFDDEYVNPI--VQNGLQTKT 306

Query: 116 EK-NFFETRVTEYQQGAGLK 134
           ++ +FF  +   Y +   ++
Sbjct: 307 KQHDFFSVKGNGYVKAINVE 326


>gi|260869355|ref|YP_003235757.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|257765711|dbj|BAI37206.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|323180097|gb|EFZ65649.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 1180]
          Length = 319

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y +E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTNEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|75758223|ref|ZP_00738348.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74494277|gb|EAO57368.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 342

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 55/140 (39%), Gaps = 18/140 (12%)

Query: 4   IAEQYQYIMRDESLHLN----FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
             E    I+RDE++H      F  ++      E      +E  +++  +L      E+ Y
Sbjct: 195 SGEIIALILRDEAIHGVTGGIFAQEIYENQLTE---AEQQEVDKEAIQLLEMLYANELDY 251

Query: 60  AHET---MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT-ENPFPWMSEVIDLKK 115
            ++    + K  +        +++++ AN+    +G +  F     NP   +   +  K 
Sbjct: 252 TNDVYAPLGKDMI----EEVNKFLRYNANKAMMNLGYDQYFDDEYVNPI--VQNGLQTKT 305

Query: 116 EK-NFFETRVTEYQQGAGLK 134
           ++ +FF  +   Y +   ++
Sbjct: 306 KQHDFFSVKGNGYVKAINVE 325


>gi|187734239|ref|YP_001881572.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           CDC 3083-94]
 gi|187431231|gb|ACD10505.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella boydii
           CDC 3083-94]
          Length = 319

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETSW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|323966928|gb|EGB62356.1| ribonucleotide reductase [Escherichia coli M863]
 gi|327251394|gb|EGE63080.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli STEC_7v]
          Length = 319

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISMAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETTW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|323159821|gb|EFZ45793.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli E128010]
          Length = 319

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|260448266|gb|ACX38688.1| Ribonucleoside-diphosphate reductase [Escherichia coli DH1]
 gi|315137289|dbj|BAJ44448.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           DH1]
          Length = 319

 Score = 50.4 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKIFLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|323978713|gb|EGB73795.1| ribonucleotide reductase [Escherichia coli TW10509]
          Length = 319

 Score = 50.4 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISMAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|254037718|ref|ZP_04871776.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           1_1_43]
 gi|226839342|gb|EEH71363.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           1_1_43]
          Length = 319

 Score = 50.4 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|320173468|gb|EFW48667.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae CDC 74-1112]
          Length = 319

 Score = 50.4 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKNFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|269941513|emb|CBI49911.1| ribonucleoside-diphosphate reductase subunit [Staphylococcus aureus
           subsp. aureus TW20]
          Length = 340

 Score = 50.4 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 15/126 (11%)

Query: 1   MVGIAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           MV   E  + I+ DE++H +        +  +   E       + +++   +  +    E
Sbjct: 187 MVHSGEIIRKIILDETIHGSGTGYAAQVIFEKFSKEEQE----DIRKELMELFDQLYFNE 242

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE 116
           + YA     K  +GL      +Y+Q+  NR    +G E +F     PF  + E       
Sbjct: 243 VEYAASLYDK--LGLT-EDVIRYIQYNGNRALMNLGWETVFN--PEPFNPIVENGLRTDT 297

Query: 117 KN--FF 120
            N  FF
Sbjct: 298 TNHDFF 303


>gi|311278369|ref|YP_003940600.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
 gi|308747564|gb|ADO47316.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
          Length = 320

 Score = 50.4 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   + P    +  + ++  +L      E+AY    
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKYQKGLEKIPPARREALRNEAVDLLMNLYENELAYTEAL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
                 G      ++++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 242 Y--AQTGWT-EEVKRFLCYNANKALMNLGYEALFPAEMADVNPA--ILAALSPNADENHD 296

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 297 FFSGSGSSYVMGKTVGTHDEDWD 319


>gi|227505793|ref|ZP_03935842.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
 gi|227197639|gb|EEI77687.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
          Length = 318

 Score = 50.4 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 17/144 (11%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   +      +  +     ++ +    EI Y  + 
Sbjct: 180 TADVIRLIIRDEAVHGYYIGYKYQQAVKQLNPAQQQGLKDSVFDLVFDLYDNEITYTEKI 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
                +G      ++++++ AN+  + +G E LF   E     +   I      D  +  
Sbjct: 240 Y--DALGWT-EDVKRFLRYNANKALNNLGYEGLFPSDECR---VDPAILSSLAPDANETH 293

Query: 118 NFFETRVTEYQQGAGLK-----WD 136
           +FF    + Y  G   +     WD
Sbjct: 294 DFFSGSGSSYVIGKAEETQDDDWD 317


>gi|237785987|ref|YP_002906692.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237758899|gb|ACR18149.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 336

 Score = 50.0 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      + +           ++ +  +L+E    E  Y  + 
Sbjct: 198 TADVIRLIIRDEAVHGYYIGYKYQRGQEALTQSERDGLKEYTFDLLYELYDNETQYTEDL 257

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                +G      ++++++ AN+  + +G E LF   E
Sbjct: 258 Y--DELGWT-EDVKRFLRYNANKALNNLGYEALFPADE 292


>gi|323188442|gb|EFZ73728.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli RN587/1]
          Length = 319

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNLEKISLAQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      +   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---SDDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|238755711|ref|ZP_04617045.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia ruckeri
           ATCC 29473]
 gi|238706078|gb|EEP98461.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia ruckeri
           ATCC 29473]
          Length = 323

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 57/144 (39%), Gaps = 17/144 (11%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +   +  +E +  +  +L +    E+ Y  E 
Sbjct: 185 TADLIRLIIRDEAVHGYYIGYKFQKGLEKVDAVRRQEIKNFTFELLQDLYDNEVRYTEEL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
                VG +    ++++ + AN+    +G E LF   E     +S  I      +  +  
Sbjct: 245 Y--DGVGWS-EDVKKFLHYNANKALMNLGYEALFPANEVT---VSAAILSALSPNADENH 298

Query: 118 NFFETRVTEYQQGAGL-----KWD 136
           +FF    + Y  G  +      WD
Sbjct: 299 DFFSGSGSSYVIGKAVNTEDDDWD 322


>gi|323341317|ref|ZP_08081561.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           ruminis ATCC 25644]
 gi|323091194|gb|EFZ33822.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           ruminis ATCC 25644]
          Length = 317

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 15/124 (12%)

Query: 4   IAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY 59
           +AE  + I+RDES+H  +           +  E       + + +   +L++    E  Y
Sbjct: 180 VAEIIKLILRDESVHGTYIGYKFQIRYRALAEEEQE----KLKFEIVNLLYDLYQNEEKY 235

Query: 60  AHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKE 116
            HE      +G        ++++ AN+    +G EPLF+ T    NP   M+ +      
Sbjct: 236 THELY--DELGWT-EDVGIFLRYNANKALMNLGFEPLFEETATDVNPVV-MNGISTSTSN 291

Query: 117 KNFF 120
            +FF
Sbjct: 292 HDFF 295


>gi|209877300|ref|XP_002140092.1| ribonucleoside-diphosphate reductase beta subunit family protein
           [Cryptosporidium muris RN66]
 gi|209555698|gb|EEA05743.1| ribonucleoside-diphosphate reductase beta subunit family protein
           [Cryptosporidium muris RN66]
          Length = 357

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 11/102 (10%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE     F + +   +K       TK   +   +ML  A  +E  +         + 
Sbjct: 224 IRRDELFQAEFCLSIARSMK-------TKPSNEYIISMLENAITIEKGFIFSIFNLEILE 276

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVID 112
           +       Y+ F A+    ++     F  + NPF   SE+I 
Sbjct: 277 IPREDIVAYLLFSADEILVELKYPRHFNVS-NPF---SELIS 314


>gi|319440834|ref|ZP_07989990.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           variabile DSM 44702]
          Length = 316

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 6/132 (4%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE +H  +                 +  + +   +L +    E AY    
Sbjct: 178 TADIIRLIIRDEVVHGYYIGYKYQVGMAGWSSAEQQAIKDEVFDLLLDLYDNECAYTETL 237

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTEN-PFPWMSEVID--LKKEKNFF 120
                +G      ++++++ AN+  + +G E +F   E    P +   +D    +  +FF
Sbjct: 238 Y--DELGWT-EDVKRFLRYNANKALNNLGYEGVFPQDECRVSPAILASLDPGANENHDFF 294

Query: 121 ETRVTEYQQGAG 132
               + Y  G  
Sbjct: 295 SGSGSAYTIGTA 306


>gi|269861603|ref|XP_002650501.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220066034|gb|EED43552.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 53

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 99  YTENPFPWMSEVIDLKKEKNFFETRVTEYQQG 130
           +  NPF +M E I L+ + NFFE R   YQ+G
Sbjct: 7   HVSNPFDFM-ENISLQGKTNFFERREANYQKG 37


>gi|253772463|ref|YP_003035294.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162613|ref|YP_003045721.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           B str. REL606]
 gi|297519661|ref|ZP_06938047.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           OP50]
 gi|242378238|emb|CAQ33013.1| nrdF, subunit of ribonucleoside-diphosphate reductase 2, beta
           subunit dimer and ribonucleoside-diphosphate reductase 2
           [Escherichia coli BL21(DE3)]
 gi|253323507|gb|ACT28109.1| Ribonucleoside-diphosphate reductase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974514|gb|ACT40185.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           B str. REL606]
 gi|253978681|gb|ACT44351.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           BL21(DE3)]
          Length = 319

 Score = 50.0 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G +PLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYKPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|10957415|ref|NP_051641.1| ribonucleotide-diphosphate reductase subunit beta [Deinococcus
           radiodurans R1]
 gi|6460844|gb|AAF12548.1|AE001826_17 ribonucleoside-diphosphate reductase, beta chain [Deinococcus
           radiodurans R1]
          Length = 354

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 15/135 (11%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL----E 56
           MV   E +  I+ DE+LH  +    +  +  E         Q  ++    +        E
Sbjct: 204 MVSAGEIFNLIILDEALHGVY----VALLAQEKFATMNAAEQADAQAWFDDTLQALYSNE 259

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKK 115
           +AY  +      VGL     +++++F  N     + L   F   + NP   +   I  + 
Sbjct: 260 LAYTEQLYAN--VGLTGE-VKKFIRFNFNVLADNLALPRPFGDEDINPI--VQNGIQARG 314

Query: 116 EK-NFFETRVTEYQQ 129
              +FF  + + Y +
Sbjct: 315 TTHDFFSAKGSSYSK 329


>gi|293394770|ref|ZP_06639061.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           odorifera DSM 4582]
 gi|291422721|gb|EFE95959.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           odorifera DSM 4582]
          Length = 319

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      ++ +  +  +L +    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKFQKGLEQVSATRRQQVKSFAFDLLQDLYDNEVRYTEEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT---ENP--FPWMSEVIDLKKEKN 118
                VG      + ++ + AN+    +G E LF  +    NP     +S   D     +
Sbjct: 241 YDD--VGWT-EDVKTFLHYNANKALMNLGYEALFPPSMAEVNPAILSALSPNADENH--D 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  + 
Sbjct: 296 FFSGSGSSYVMGKAVN 311


>gi|331684294|ref|ZP_08384886.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
 gi|331077909|gb|EGI49115.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
          Length = 319

 Score = 49.6 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+    I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIHLIIRDEAVHGYYIGYKYQKNLEKISQARREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|152964774|ref|YP_001360558.1| ribonucleotide-diphosphate reductase subunit beta [Kineococcus
           radiotolerans SRS30216]
 gi|151359291|gb|ABS02294.1| Ribonucleoside-diphosphate reductase [Kineococcus radiotolerans
           SRS30216]
          Length = 323

 Score = 49.6 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 12/136 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  +L+E    E  Y  + 
Sbjct: 185 TADLVRLIIRDEAVHGYYIGYKFQRGLELVDQAKRDEIKDYAFELLYELYDNECKYTADL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
                VGL     + ++ + AN+    +G E +F         +   I      +  +  
Sbjct: 245 Y--DGVGLT-EDVKTFLHYNANKALMNLGYEGMFPSD---MTKVDPSILSALSPNADENH 298

Query: 118 NFFETRVTEYQQGAGL 133
           +FF    + Y  G  +
Sbjct: 299 DFFSGSGSSYVIGKAV 314


>gi|295398337|ref|ZP_06808379.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
 gi|294973476|gb|EFG49261.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
          Length = 317

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 10/122 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + ++RDES+H  +      Q   E      + F Q   + L E    E A+  E 
Sbjct: 178 LAELIKLVIRDESVHGTYLGYKFRQDFEELTQDEQEAFTQWMYSFLEELLEKEFAFTEEL 237

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT----ENPFPWMSEVIDLKKEK-N 118
             +  +GL A   + ++++ AN+    +G    F+       NP   +   I ++    +
Sbjct: 238 YTE--IGL-AEDIKTFVKYNANKSLQNMGFGIYFENALAKDVNPI--VMNGISIETSNHD 292

Query: 119 FF 120
           FF
Sbjct: 293 FF 294


>gi|251788642|ref|YP_003003363.1| Ribonucleoside-diphosphate reductase [Dickeya zeae Ech1591]
 gi|247537263|gb|ACT05884.1| Ribonucleoside-diphosphate reductase [Dickeya zeae Ech1591]
          Length = 320

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q          ++ Q  +  +L      E+ Y HE 
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKYQQGLKRLSTPEQRDLQLFAYELLQTLYDNEVDYTHEL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
                VG +    + ++ + AN+    +G E LF       NP   +   +    E+N  
Sbjct: 242 Y--DSVGWSGDVIK-FLHYNANKALMNLGYEALFPADMTDVNPA--ILAALSPGAEENHD 296

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 297 FFSGAGSSYVIGKAVE 312


>gi|319948549|ref|ZP_08022680.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea
           P4]
 gi|319437796|gb|EFV92785.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea
           P4]
          Length = 338

 Score = 49.2 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 17/144 (11%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E +  +  +L E    E  Y  + 
Sbjct: 200 TADVIRLIIRDEAVHGYYIGYKYQRGLEHVTQAERDELKDYTFELLFELYDNEADYTEDL 259

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI------DLKKEK 117
                VG      ++++++ AN+    +G E +F   E     +   I      +  +  
Sbjct: 260 Y--DPVGWT-EDVKKFLRYNANKALMNMGYEGMFPKDETD---VDPAILSALSPNADENH 313

Query: 118 NFFETRVTEYQQGAG-----LKWD 136
           +FF    + Y  G         WD
Sbjct: 314 DFFSGSGSSYVMGKAEATEDEDWD 337


>gi|24113980|ref|NP_708490.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 301]
 gi|30064043|ref|NP_838214.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|110806691|ref|YP_690211.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 5 str. 8401]
 gi|24053093|gb|AAN44197.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           flexneri 2a str. 301]
 gi|30042299|gb|AAP18024.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           flexneri 2a str. 2457T]
 gi|110616239|gb|ABF04906.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           flexneri 5 str. 8401]
 gi|281602052|gb|ADA75036.1| Ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           flexneri 2002017]
 gi|313648326|gb|EFS12770.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           flexneri 2a str. 2457T]
          Length = 319

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ +  N+    +G EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNTNKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|71894414|ref|YP_278522.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           synoviae 53]
 gi|71851202|gb|AAZ43811.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma
           synoviae 53]
          Length = 339

 Score = 48.8 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 10/137 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ LH  +      Q   + P     E+++ +  +++E   LE  + 
Sbjct: 198 LPNTSDIIRLILRDKVLHNYYSGYKYRQKVEKLPKEKQAEYKEFTFKIMYELIELEKDFL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
            E       GL A     +  + A +     G E  F     K +   F  +S   D   
Sbjct: 258 RELY--DGFGL-ADEAIAFSLYNAGKFLQNCGYESPFTPEETKISPEVFAQLSARADENH 314

Query: 116 EKNFFETRVTEYQQGAG 132
             +FF    + Y  G  
Sbjct: 315 --DFFSGNGSSYVMGVS 329


>gi|162448128|ref|YP_001621260.1| ribonucleoside-diphosphate reductase subunit beta [Acholeplasma
           laidlawii PG-8A]
 gi|161986235|gb|ABX81884.1| ribonucleoside-diphosphate reductase, beta chain [Acholeplasma
           laidlawii PG-8A]
          Length = 369

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 15/131 (11%)

Query: 5   AEQYQYIMRDESLHL----NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
            E    I+RDES+H         +V      E     T    Q     L E    E    
Sbjct: 223 GEIINLILRDESIHGLYVGRLAQEVFETFSNELQEQLT----QWVHDFLLE-LYHEQNEL 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-N 118
            E++        +   + ++++ AN+    +G +P F+  + NP   +   ++ + +  +
Sbjct: 278 VESIYDAVE--LSHDVKIFVRYNANKALMNLGFDPYFEPEDVNPV--VLNGLNTETKTMD 333

Query: 119 FFETRVTEYQQ 129
            F  +   YQ+
Sbjct: 334 NFSMKGNGYQK 344


>gi|329296713|ref|ZP_08254049.1| ribonucleoside-diphosphate reductase [Plautia stali symbiont]
          Length = 319

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +           E QQ +  +L      E+ Y    
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKALETVDDARRAELQQFAIELLLALYENEVVYTEAL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENP--FPWMSEVIDLKKEKN 118
                VG      + ++ + AN+    +G E L        NP     +S   D     +
Sbjct: 241 YAD--VGWT-EEVKTFLHYNANKALMNLGYEALSPAELTAVNPAILSALSPNADENH--D 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|323167149|gb|EFZ52867.1| ribonucleoside-diphosphate reductase 2 subunit beta domain protein
           [Shigella sonnei 53G]
          Length = 150

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 12  TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 71

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N  
Sbjct: 72  YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADENHD 126

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 127 FFSGSGSSYVMGKAVE 142


>gi|323342959|ref|ZP_08083190.1| ribonucleotide-diphosphate reductase subunit beta [Erysipelothrix
           rhusiopathiae ATCC 19414]
 gi|322463023|gb|EFY08218.1| ribonucleotide-diphosphate reductase subunit beta [Erysipelothrix
           rhusiopathiae ATCC 19414]
          Length = 358

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 52/137 (37%), Gaps = 11/137 (8%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
            E    I+RDES+H  +  ++  ++  +          +   T L      E+       
Sbjct: 217 GEIINLILRDESIHGLYIGNLAMELYRKFDAETQASLYEWLTTYLDAIYEEEVELIEAIY 276

Query: 65  -PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFE 121
            P       +   + ++++ AN+    +G +  ++Y E NP   +   ++ + +  + F 
Sbjct: 277 DPVEL----SHDVKIFVRYNANKAMMNLGFDAYYEYEEVNPV--VLNGLNTETKTMDNFS 330

Query: 122 TRVTEYQ--QGAGLKWD 136
            +   YQ  +   L  D
Sbjct: 331 MKGNGYQKMKSESLHDD 347


>gi|209762238|gb|ACI79431.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|320646030|gb|EFX15007.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. 493-89]
 gi|320651330|gb|EFX19761.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. H 2687]
          Length = 319

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 14/138 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAH 61
            A+  + I+RDE++H  +        K          +E +  +  +L E    E+ Y  
Sbjct: 181 TADLIRLIIRDEAVHGYYIG--YKHQKNMEKISLGQREELKSFAFDLLLELYDNELQYTD 238

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN 118
           E   +      A   + ++ + AN+    +G EPLF       NP   +   +    ++N
Sbjct: 239 ELYAETPW---ADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPA--ILAALSPNADEN 293

Query: 119 --FFETRVTEYQQGAGLK 134
             FF    + Y  G  ++
Sbjct: 294 HDFFSGSGSSYVMGKAVE 311


>gi|146322252|ref|YP_001174719.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis]
 gi|145968743|gb|ABQ00021.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis]
          Length = 316

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 10/122 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + ++RDES+H  +      Q   E      + F     + L E    E AY  E 
Sbjct: 178 LAELIKLVIRDESVHGTYLGYKFRQDFNELSITEQENFTNWMYSFLEELLDNEFAYTEEV 237

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-N 118
             +  +GL     + ++++ AN+    +G +  FK       NP   +   I ++    +
Sbjct: 238 YSE--IGL-VEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPI--VMNGISIETANHD 292

Query: 119 FF 120
           FF
Sbjct: 293 FF 294


>gi|296104353|ref|YP_003614499.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058812|gb|ADF63550.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 319

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +   +  +E +  +  +L +    E++Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKGLEKVSDVRREELKGFALDLLMDLYDNELSYTEEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
                        + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 241 YAGTGW---EEEVKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK-----WD 136
           FF    + Y  G  ++     WD
Sbjct: 296 FFSGSGSSYVMGKAVETEDEDWD 318


>gi|146312797|ref|YP_001177871.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp.
           638]
 gi|145319673|gb|ABP61820.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Enterobacter sp. 638]
          Length = 319

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L +    E++Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKGLEKISEAKREELKGFALDLLMDLYDNELSYTEEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
                        + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 241 YAGTSW---ETDVKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK-----WD 136
           FF    + Y  G  ++     WD
Sbjct: 296 FFSGSGSSYVMGKAVETEDADWD 318


>gi|157159438|ref|YP_001463986.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           E24377A]
 gi|218555224|ref|YP_002388137.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI1]
 gi|300815921|ref|ZP_07096145.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
 gi|157081468|gb|ABV21176.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E24377A]
 gi|218361992|emb|CAQ99598.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli IAI1]
 gi|300531850|gb|EFK52912.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
          Length = 319

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +      A   + ++ + AN+    +  EPLF       NP   +   +    ++N  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLDYEPLFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|171779436|ref|ZP_02920400.1| hypothetical protein STRINF_01281 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282053|gb|EDT47484.1| hypothetical protein STRINF_01281 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 316

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 10/122 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + ++RDES+H  +      Q   E      + F     + L E    E AY  E 
Sbjct: 178 LAELIKLVIRDESVHGTYLGYKFRQDFNELAITEQENFTNWMYSFLEELLDNEFAYTEEV 237

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-N 118
             +  +GL     + ++++ AN+    +G +  FK       NP   +   I ++    +
Sbjct: 238 YSE--IGL-VEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPI--VMNGISIETANHD 292

Query: 119 FF 120
           FF
Sbjct: 293 FF 294


>gi|237729635|ref|ZP_04560116.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
 gi|226908241|gb|EEH94159.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
          Length = 319

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L E    E  Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKGLEHISESAREELKNFAFDLLMELYDNEARYTEEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKN 118
             +          + ++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 241 YAETGW---VDDVKAFLCYNANKALMNLGYEALFPPEMAEVNPTILAALSPNADENH--D 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAVE 311


>gi|209558898|ref|YP_002285370.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes NZ131]
 gi|209540099|gb|ACI60675.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Streptococcus pyogenes NZ131]
          Length = 337

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 10/135 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           E +     +L+E   LE AY 
Sbjct: 196 MPNTSDIIRLILRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
            E      +   A    ++  + A +    +G E  F     + +   F  +S   D   
Sbjct: 256 RELYAGFDL---AEDAIRFSLYNAGKFLQNLGYESPFTDEETRVSPEVFAQLSARADENH 312

Query: 116 EKNFFETRVTEYQQG 130
             +FF    + Y  G
Sbjct: 313 --DFFSGNGSSYVMG 325


>gi|56807592|ref|ZP_00365501.1| COG0208: Ribonucleotide reductase, beta subunit [Streptococcus
           pyogenes M49 591]
          Length = 311

 Score = 47.7 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 10/135 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           E +     +L+E   LE AY 
Sbjct: 170 MPNTSDIIRLILRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYL 229

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
            E      +   A    ++  + A +    +G E  F     + +   F  +S   D   
Sbjct: 230 RELYAGFDL---AEDAIRFSLYNAGKFLQNLGYESPFTDEETRVSPEVFAQLSARADENH 286

Query: 116 EKNFFETRVTEYQQG 130
             +FF    + Y  G
Sbjct: 287 --DFFSGNGSSYVMG 299


>gi|260599071|ref|YP_003211642.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           turicensis z3032]
 gi|260218248|emb|CBA33173.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Cronobacter
           turicensis z3032]
          Length = 320

 Score = 47.7 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   +      +  +  +  ++ E    E+AY    
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKYQQGLAQVDDARRESLKTFALDLMMELYDNELAYTEAL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP--FPWMSEVIDLKKEKN 118
                VG        ++ + AN+    +G E LF       NP     +S   D     +
Sbjct: 242 YRD--VGW-VDDVSAFLCYNANKALMNLGYEALFPPEMAQVNPSILAALSPGADENH--D 296

Query: 119 FFETRVTEYQQGAGLK-----WD 136
           FF    + Y  G  ++     WD
Sbjct: 297 FFSGSGSSYVMGKAVETEDADWD 319


>gi|15674552|ref|NP_268726.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes M1 GAS]
 gi|71910160|ref|YP_281710.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS5005]
 gi|94987981|ref|YP_596082.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS9429]
 gi|94989855|ref|YP_597955.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10270]
 gi|94991863|ref|YP_599962.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS2096]
 gi|13621658|gb|AAK33447.1| putative ribonucleotide reductase 2 [Streptococcus pyogenes M1 GAS]
 gi|71852942|gb|AAZ50965.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS5005]
 gi|94541489|gb|ABF31538.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS9429]
 gi|94543363|gb|ABF33411.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10270]
 gi|94545371|gb|ABF35418.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS2096]
          Length = 337

 Score = 47.7 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 10/135 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           E +     +L+E   LE AY 
Sbjct: 196 MPNTSDIIRLILRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
            E      +   A    ++  + A +    +G E  F     + +   F  +S   D   
Sbjct: 256 RELYAGFDL---AEDAIRFSLYNAGKFLQNLGYESPFTDEETRVSPEVFAQLSARADENH 312

Query: 116 EKNFFETRVTEYQQG 130
             +FF    + Y  G
Sbjct: 313 --DFFSGNGSSYVMG 325


>gi|156932794|ref|YP_001436710.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156531048|gb|ABU75874.1| hypothetical protein ESA_00590 [Cronobacter sakazakii ATCC BAA-894]
          Length = 320

 Score = 47.7 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 13/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      Q   +      +  +  S  ++ E    E+AY    
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKYQQALAQVDDARRESLKTFSLDLMMELYDNELAYTEAL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEK-NF 119
                VG        ++ + AN+    +G E LF       NP   ++ +     E  +F
Sbjct: 242 YRD--VGW-VDDVSAFLCYNANKALMNLGYEALFPPEMAQVNP-SILAALSPGADENHDF 297

Query: 120 FETRVTEYQQGAGLK-----WD 136
           F    + Y  G  ++     WD
Sbjct: 298 FSGSGSSYVMGKAVETEDEDWD 319


>gi|94993745|ref|YP_601843.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10750]
 gi|94547253|gb|ABF37299.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10750]
          Length = 337

 Score = 47.3 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 10/135 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           E +     +L+E   LE AY 
Sbjct: 196 MPNTSDIIRLILRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
            E      +   A    ++  + A +    +G E  F     + +   F  +S   D   
Sbjct: 256 RELYAGFDL---AEDAIRFSLYNAGKFLQNLGYESPFTEEETRVSPEVFAQLSARADENH 312

Query: 116 EKNFFETRVTEYQQG 130
             +FF    + Y  G
Sbjct: 313 --DFFSGNGSSYVMG 325


>gi|19745563|ref|NP_606699.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS8232]
 gi|19747686|gb|AAL97198.1| putative ribonucleotide reductase 2 [Streptococcus pyogenes
           MGAS8232]
          Length = 337

 Score = 47.3 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           E +     +L+E   LE AY 
Sbjct: 196 MPNTSDIIRLILRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E      +   A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 256 RELYAGFDL---AEDAIRFSLYNAGKFLQNLGYDSPFTEEETRISPEVFAQLSARADENH 312

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 313 DFFSGNGSSYVMG 325


>gi|157148214|ref|YP_001455533.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter
           koseri ATCC BAA-895]
 gi|157085419|gb|ABV15097.1| hypothetical protein CKO_04025 [Citrobacter koseri ATCC BAA-895]
          Length = 319

 Score = 47.3 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +       E +  +  +L E    E  Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKGLEKLSESERDELKHFALDLLMELYDNESRYTEEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +            ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 241 YAETGW---VADVNAFLCYNANKALMNLGYEALFPAEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKAIE 311


>gi|71903000|ref|YP_279803.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS6180]
 gi|71802095|gb|AAX71448.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS6180]
          Length = 337

 Score = 47.3 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           E +     +L+E   LE AY 
Sbjct: 196 MPNTSDIIRLILRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E      +   A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 256 RELYAGFDL---AEDAIRFSLYNAGKFLQNLGYDSPFTDEETRISPEVFAQLSARADENH 312

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 313 DFFSGNGSSYVMG 325


>gi|139474322|ref|YP_001129038.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes str. Manfredo]
 gi|134272569|emb|CAM30835.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           pyogenes str. Manfredo]
          Length = 337

 Score = 47.3 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           E +     +L+E   LE AY 
Sbjct: 196 MPNTSDIIRLILRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E      +   A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 256 RELYAGFDL---AEDAIRFSLYNAGKFLQNLGYDSPFTDEETRISPEVFAQLSARADENH 312

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 313 DFFSGNGSSYVMG 325


>gi|21909837|ref|NP_664105.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS315]
 gi|28896468|ref|NP_802818.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes SSI-1]
 gi|50913718|ref|YP_059690.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10394]
 gi|21904023|gb|AAM78908.1| putative ribonucleotide reductase 2 [Streptococcus pyogenes
           MGAS315]
 gi|28811719|dbj|BAC64651.1| putative ribonucleotide reductase 2 [Streptococcus pyogenes SSI-1]
 gi|50902792|gb|AAT86507.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10394]
          Length = 337

 Score = 47.3 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 10/135 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           E +     +L+E   LE AY 
Sbjct: 196 MPNTSDIIRLILRDKVIHNYYSGYKYQQKVARLSPEKQAEMKAFVFDLLYELIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
            E      +   A    ++  + A +    +G +  F     + +   F  +S   D   
Sbjct: 256 RELYAGFDL---AEDAIRFSLYNAGKFLQNLGYDSPFTDEETRVSPEVFAQLSARADENH 312

Query: 116 EKNFFETRVTEYQQG 130
             +FF    + Y  G
Sbjct: 313 --DFFSGNGSSYVMG 325


>gi|328464295|gb|EGF35725.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           helveticus MTCC 5463]
          Length = 335

 Score = 47.3 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 15/146 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +          +       E ++     L +   LE  Y 
Sbjct: 194 LPNTADIIRLILRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYL 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
           HE      +         +  + A +    +G +  F       +   F  +S   D   
Sbjct: 254 HELYGDFDL---VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYVSPEVFAQLSAQADENH 310

Query: 116 EKNFFETRVTEYQQGAGLK-----WD 136
             +FF    + Y  G G +     WD
Sbjct: 311 --DFFSGNGSSYVMGTGEETKDDDWD 334


>gi|293572347|ref|ZP_06683339.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
 gi|291607581|gb|EFF36911.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
          Length = 316

 Score = 47.3 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 10/122 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + ++RDES+H  +      Q   E      + +     + L E    E AY  E 
Sbjct: 178 LAELIKLVIRDESVHGTYLGYKFRQDFNELSITEQENYTNWMYSFLEELLDNEFAYTEEV 237

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK-N 118
             +  +GL     + ++++ AN+    +G +  FK       NP   +   I ++    +
Sbjct: 238 YSE--IGL-VEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPI--VMNGISIETANHD 292

Query: 119 FF 120
           FF
Sbjct: 293 FF 294


>gi|260102934|ref|ZP_05753171.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus helveticus
           DSM 20075]
 gi|111610216|gb|ABH11600.1| ribonucleoside-diphosphate reductase 2 alpha subunit [Lactobacillus
           helveticus CNRZ32]
 gi|260083260|gb|EEW67380.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus helveticus
           DSM 20075]
          Length = 340

 Score = 47.3 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 15/146 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +          +       E ++     L +   LE  Y 
Sbjct: 199 LPNTADIIRLILRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYL 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
           HE      +         +  + A +    +G +  F       +   F  +S   D   
Sbjct: 259 HELYGDFDL---VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYVSPEVFAQLSAQADENH 315

Query: 116 EKNFFETRVTEYQQGAGLK-----WD 136
             +FF    + Y  G G +     WD
Sbjct: 316 --DFFSGNGSSYVMGTGEETKDDDWD 339


>gi|161508077|ref|YP_001578044.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           helveticus DPC 4571]
 gi|160349066|gb|ABX27740.1| ribonucleoside-diphosphate reductase [Lactobacillus helveticus DPC
           4571]
          Length = 340

 Score = 46.9 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 15/146 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +          +       E ++     L +   LE  Y 
Sbjct: 199 LPNTADIIRLILRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYL 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
           HE      +         +  + A +    +G +  F       +   F  +S   D   
Sbjct: 259 HELYGDFDL---VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYISPEVFAQLSAQADENH 315

Query: 116 EKNFFETRVTEYQQGAGLK-----WD 136
             +FF    + Y  G G +     WD
Sbjct: 316 --DFFSGNGSSYVMGTGEETKDDDWD 339


>gi|313892092|ref|ZP_07825688.1| ribonucleoside-diphosphate reductase, beta subunit [Dialister
           microaerophilus UPII 345-E]
 gi|329121529|ref|ZP_08250153.1| ribonucleotide-diphosphate reductase subunit beta [Dialister
           micraerophilus DSM 19965]
 gi|313119484|gb|EFR42680.1| ribonucleoside-diphosphate reductase, beta subunit [Dialister
           microaerophilus UPII 345-E]
 gi|327469444|gb|EGF14914.1| ribonucleotide-diphosphate reductase subunit beta [Dialister
           micraerophilus DSM 19965]
          Length = 338

 Score = 46.9 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 52/144 (36%), Gaps = 11/144 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      Q   +       E ++    ++ E   LE  Y 
Sbjct: 197 LPNTSDMIRLILRDKVIHNYYSGYKYQQKIAKENDARKAEMKKFVFDLMEEEIELEKIYL 256

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKN- 118
            +      +   A    ++  + A +    +G +  F +   +  P +   +  + ++N 
Sbjct: 257 RDLYKGFDI---ADDAIRFSVYNAGKFLQNLGYDSPFSEEETHIAPEVFAQLSARADENH 313

Query: 119 -FFETRVTEYQQGAGLK-----WD 136
            FF    + Y  G   +     WD
Sbjct: 314 DFFSGSGSSYVIGTTEETTDEDWD 337


>gi|293556439|ref|ZP_06675017.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
 gi|291601403|gb|EFF31677.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
          Length = 316

 Score = 46.9 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 10/134 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + ++RDES+H  +      Q   E       EF     T L+E    E AY  E 
Sbjct: 178 LAELIKLVIRDESVHGTYLGYKFRQDFEELTLEEKDEFTNWMYTFLNELLKNEFAYTEEV 237

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT----ENPFPWMSEVIDLKKEK-N 118
             +  +GL     + ++++ AN+    +G    F+       NP   +   I ++    +
Sbjct: 238 YSE--IGL-VEDIKTFVKYNANKSLQNMGFGIYFEDALVNDVNPI--VMNGISIETANHD 292

Query: 119 FFETRVTEYQQGAG 132
           FF      Y  G  
Sbjct: 293 FFSQVGAGYLMGGA 306


>gi|304373441|ref|YP_003856650.1| Ribonucleoside-diphosphate reductase beta chai [Mycoplasma
           hyorhinis HUB-1]
 gi|304309632|gb|ADM22112.1| Ribonucleoside-diphosphate reductase beta chai [Mycoplasma
           hyorhinis HUB-1]
 gi|330723642|gb|AEC46012.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           hyorhinis MCLD]
          Length = 344

 Score = 46.9 bits (111), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 11/144 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   + P    +E ++    +L+E   LE  Y 
Sbjct: 203 LPNTSDIIRLILRDKVIHNYYSGYKYQKKVEKLPLKKQEEMKKFVFDLLYELIDLEKTYL 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
           +E   +  VGL A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 263 NELYSE--VGL-AEEAIKFSVYNAGKFLQNLGYDSPFTEEETRIEPEIFNQLSARADENH 319

Query: 119 -FFETRVTEYQQGAGLK-----WD 136
            FF    + Y  G   +     WD
Sbjct: 320 DFFSGNGSSYVMGVSEETEDEDWD 343


>gi|194246584|ref|YP_002004223.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Phytoplasma mali]
 gi|193806941|emb|CAP18373.1| Ribonucleoside-diphosphate reductase, beta chain [Candidatus
           Phytoplasma mali]
          Length = 348

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 50/128 (39%), Gaps = 7/128 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  +   +   I      L   E  +    +L      +IA     
Sbjct: 207 SGEIINLIIRDESVHGVYIARLALNIYNSFDKLIKDELSKWMYDLLKYFYQEQIALVKSV 266

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKKEK-NFFE 121
             + ++        +++++ AN+    +G  P F+  E NP   +   ++ + +  + F 
Sbjct: 267 YNEHYL---INDVNKFVRYNANKALMNLGFNPYFEKEEVNPV--ILNGLNTETKTMDNFS 321

Query: 122 TRVTEYQQ 129
            +   YQ+
Sbjct: 322 MKGNGYQK 329


>gi|300362837|ref|ZP_07059008.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           gasseri JV-V03]
 gi|300353073|gb|EFJ68950.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           gasseri JV-V03]
          Length = 275

 Score = 46.5 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 15/146 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +          +       E ++     L +   LE  Y 
Sbjct: 134 LPNTADIIRLILRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYL 193

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
           HE      +         +  + A +    +G +  F       +   F  +S   D   
Sbjct: 194 HELYDDFDL---VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYISPEVFAQLSAQADENH 250

Query: 116 EKNFFETRVTEYQQGAGLK-----WD 136
             +FF    + Y  G G +     WD
Sbjct: 251 --DFFSGNGSSYVMGTGEETKDDDWD 274


>gi|32491358|ref|NP_871612.1| ribonucleotide-diphosphate reductase subunit beta [Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis]
 gi|25166565|dbj|BAC24755.1| nrdF [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 324

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 9/138 (6%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            ++  + I+RDE++H  +      +  I       K  +  +  +L++    EI Y   +
Sbjct: 186 TSDLIRLIIRDEAVHGYYIGYKFQKDLISLNEKEKKNIKDFAFNLLYKLYENEINY-SYS 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVI-DLKKEKNF 119
           + K  +     +   ++ + AN+    +G E  F   E   NP   +S +  +  +  +F
Sbjct: 245 LYKDII--PIKNIISFLNYNANKSLMNLGYEQYFPDDESLVNP-DILSALTPNSNENHDF 301

Query: 120 FETRVTEYQQG-AGLKWD 136
           F    + Y  G   L  D
Sbjct: 302 FSGSGSSYVMGKTVLTKD 319


>gi|284931055|gb|ADC30993.1| Ribonucleoside-diphosphate reductase subunit beta [Mycoplasma
           gallisepticum str. F]
          Length = 339

 Score = 46.1 bits (109), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 10/135 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +          + P    +E+++    +L +   LE  + 
Sbjct: 198 LPNTSDIIRLILRDKVIHNYYSGYKYRLKVQKLPKEKQEEYKKFVFEILDKLIELEKDFL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
            E       GL A     +  + A +     G E  F     K +   F  +S   D   
Sbjct: 258 RELY--DGFGL-ADEAIAFSLYNAGKFLQNCGYESPFTPEETKISPEVFAQLSARADENH 314

Query: 116 EKNFFETRVTEYQQG 130
             +FF    + Y  G
Sbjct: 315 --DFFSGNGSSYIMG 327


>gi|184156148|ref|YP_001844488.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum IFO 3956]
 gi|227515317|ref|ZP_03945366.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
 gi|260662379|ref|ZP_05863274.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|183227492|dbj|BAG28008.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum IFO 3956]
 gi|227086331|gb|EEI21643.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
 gi|260553070|gb|EEX26013.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|299783625|gb|ADJ41623.1| Ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum CECT 5716]
          Length = 316

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 12/123 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           ++E  + ++RDES+H  +      Q   E        F+     +L +    E A+    
Sbjct: 178 LSEVIKLVIRDESVHGTYLGYKFQQAFAELTPDEQTRFRAWMDDLLADLLENEFAFTEVV 237

Query: 64  M-PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE----NPFPWMSEVIDLKKEK- 117
             P   V       +Q++++ AN+  + +G   +F +      NP   +   I  +    
Sbjct: 238 YAPIQMV----EDVKQFVRYNANKAMNNMGFAAIFNHAAIEDINPI--VMNGISTETANH 291

Query: 118 NFF 120
           +FF
Sbjct: 292 DFF 294


>gi|161502142|ref|YP_001569254.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160863489|gb|ABX20112.1| hypothetical protein SARI_00165 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 319

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 14/138 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH-- 61
            A+  + I+RDE++H  +          +   +  +E +  +  +L E    E  Y    
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQIALQKQSAIEREELKLFALDLLMELYDNETRYTEAL 240

Query: 62  ETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN 118
                          + ++ + AN+    +G E LF       NP   +   +    ++N
Sbjct: 241 YAETDWV-----DDVKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAALSPNADEN 293

Query: 119 --FFETRVTEYQQGAGLK 134
             FF    + Y  G  ++
Sbjct: 294 HDFFSGSGSSYVMGKAVE 311


>gi|295097265|emb|CBK86355.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 319

 Score = 46.1 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L +    E++Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKGLEKVSAEKREELKGFALDLLMDLYDNELSYTEEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
                        + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 241 YAGTGW---EEDVKAFLCYNANKALMNLGYEALFPPEMAEVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK-----WD 136
           FF    + Y  G  ++     WD
Sbjct: 296 FFSGSGSSYVMGKAVETQDEDWD 318


>gi|82545243|ref|YP_409190.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           Sb227]
 gi|81246654|gb|ABB67362.1| ribonucleoside-diphosphate reductase 2, beta chain, frag [Shigella
           boydii Sb227]
 gi|320186462|gb|EFW61190.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri CDC 796-83]
 gi|332091953|gb|EGI97031.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           boydii 3594-74]
          Length = 304

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 3/96 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +   +      +E +  +  +L E    E+ Y+ E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYSDEL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY 99
             +      A   + ++ + AN+    +G EPLF  
Sbjct: 241 YAETPW---ADDVKAFLCYNANKALMNLGYEPLFPA 273


>gi|221309908|ref|ZP_03591755.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221314231|ref|ZP_03596036.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221319154|ref|ZP_03600448.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221323427|ref|ZP_03604721.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. SMY]
          Length = 123

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 7/96 (7%)

Query: 39  KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 98
           KE    +  +L E    E+ Y  +      VGL AP  ++++++ AN+  + +G +  F+
Sbjct: 16  KELYAWALNLLQELYENELEYTEDVY--DQVGL-APDVKKFIRYNANKALNNLGFDHWFE 72

Query: 99  YTE-NPFPWMSEVIDLKKEK-NFFETRVTEYQQGAG 132
             + NP   +   ++ K +  +FF T+   Y++   
Sbjct: 73  EEDVNPI--VINGLNTKTKSHDFFSTKGNGYKKATV 106


>gi|293380788|ref|ZP_06626833.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus 214-1]
 gi|290922652|gb|EFD99609.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus 214-1]
          Length = 335

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 15/146 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +          +       E ++     L +   LE  Y 
Sbjct: 194 LPNTADIIRLILRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYL 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
           HE      +         +  + A +    +G +  F       +   F  +S   D   
Sbjct: 254 HELYDDFDL---VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYVSPEVFAQLSAQADENH 310

Query: 116 EKNFFETRVTEYQQGAGLK-----WD 136
             +FF    + Y  G G +     WD
Sbjct: 311 --DFFSGNGSSYVMGTGEETTDDDWD 334


>gi|256849455|ref|ZP_05554887.1| ribonucleoside-diphosphate reductase 2 alpha subunit [Lactobacillus
           crispatus MV-1A-US]
 gi|262046124|ref|ZP_06019087.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus MV-3A-US]
 gi|256713571|gb|EEU28560.1| ribonucleoside-diphosphate reductase 2 alpha subunit [Lactobacillus
           crispatus MV-1A-US]
 gi|260573454|gb|EEX30011.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus MV-3A-US]
          Length = 335

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 15/146 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +          +       E ++     L +   LE  Y 
Sbjct: 194 LPNTADIIRLILRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYL 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
           HE      +         +  + A +    +G +  F       +   F  +S   D   
Sbjct: 254 HELYDDFDL---VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYVSPEVFAQLSAQADENH 310

Query: 116 EKNFFETRVTEYQQGAGLK-----WD 136
             +FF    + Y  G G +     WD
Sbjct: 311 --DFFSGNGSSYVMGTGEETKDDDWD 334


>gi|238852996|ref|ZP_04643394.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           gasseri 202-4]
 gi|282851729|ref|ZP_06261093.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           gasseri 224-1]
 gi|238834391|gb|EEQ26630.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           gasseri 202-4]
 gi|282557132|gb|EFB62730.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           gasseri 224-1]
          Length = 335

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 15/146 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +          +       E ++     L +   LE  Y 
Sbjct: 194 LPNTADIIRLILRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYL 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
           HE      +         +  + A +    +G +  F       +   F  +S   D   
Sbjct: 254 HELYDDFDL---VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYVSPEVFAQLSAQADENH 310

Query: 116 EKNFFETRVTEYQQGAGLK-----WD 136
             +FF    + Y  G G +     WD
Sbjct: 311 --DFFSGNGSSYVMGTGEETKDDDWD 334


>gi|227878534|ref|ZP_03996468.1| ribonucleoside-diphosphate reductase [Lactobacillus crispatus
           JV-V01]
 gi|227861868|gb|EEJ69453.1| ribonucleoside-diphosphate reductase [Lactobacillus crispatus
           JV-V01]
          Length = 352

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 15/146 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +          +       E ++     L +   LE  Y 
Sbjct: 211 LPNTADIIRLILRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYL 270

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
           HE      +         +  + A +    +G +  F       +   F  +S   D   
Sbjct: 271 HELYDDFDL---VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYVSPEVFAQLSAQADENH 327

Query: 116 EKNFFETRVTEYQQGAGLK-----WD 136
             +FF    + Y  G G +     WD
Sbjct: 328 --DFFSGNGSSYVMGTGEETTDDDWD 351


>gi|300362830|ref|ZP_07059004.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           gasseri JV-V03]
 gi|300353120|gb|EFJ68994.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           gasseri JV-V03]
          Length = 340

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 15/146 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +          +       E ++     L +   LE  Y 
Sbjct: 199 LPNTADIIRLILRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYL 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
           HE      +         +  + A +    +G +  F       +   F  +S   D   
Sbjct: 259 HELYDDFDL---VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYISPEVFAQLSAQADENH 315

Query: 116 EKNFFETRVTEYQQGAGLK-----WD 136
             +FF    + Y  G G +     WD
Sbjct: 316 --DFFSGNGSSYVMGTGEETKDDDWD 339


>gi|312984313|ref|ZP_07791656.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus CTV-05]
 gi|310894278|gb|EFQ43357.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus CTV-05]
          Length = 335

 Score = 45.8 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 15/146 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +          +       E ++     L +   LE  Y 
Sbjct: 194 LPNTADIIRLILRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYL 253

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
           HE      +         +  + A +    +G +  F       +   F  +S   D   
Sbjct: 254 HELYDDFDL---VDDAIHFSLYNAGKFLQNLGYDTPFTAEETYISPEVFAQLSAQADENH 310

Query: 116 EKNFFETRVTEYQQGAGLK-----WD 136
             +FF    + Y  G G +     WD
Sbjct: 311 --DFFSGNGSSYVMGTGEETKDDDWD 334


>gi|12045084|ref|NP_072895.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           genitalium G37]
 gi|255660230|ref|ZP_05405639.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           genitalium G37]
 gi|1350602|sp|P47471|RIR2_MYCGE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3844832|gb|AAC71450.1| ribonucleoside-diphosphate reductase, beta chain [Mycoplasma
           genitalium G37]
 gi|166078981|gb|ABY79599.1| ribonucleoside-diphosphate reductase, beta chain [synthetic
           Mycoplasma genitalium JCVI-1.0]
          Length = 340

 Score = 45.4 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 49/135 (36%), Gaps = 6/135 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   + P    KE +     +++    LE  Y 
Sbjct: 199 LPNTSDIIRLILRDKVIHNYYSGYKYQRKLEKLPLAKQKEMKAFVFELMYRLIELEKDYL 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E       G+      ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 259 KELYEG--FGI-VDDAIKFSVYNAGKFLQNLGYDSPFTAAETRIKPEIFAQLSARADENH 315

Query: 119 -FFETRVTEYQQGAG 132
            FF    + Y  G  
Sbjct: 316 DFFSGNGSSYVMGVS 330


>gi|31544249|ref|NP_852827.1| ribonucleoside-diphosphate reductase subunit beta [Mycoplasma
           gallisepticum str. R(low)]
 gi|26398734|sp|Q9XC20|RIR2_MYCGA RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|5565932|gb|AAD45275.1|AF152114_3 ribonucleoside-diphosphate reductase beta chain [Mycoplasma
           gallisepticum]
 gi|31541093|gb|AAP56395.1| Ribonucleoside-diphosphate reductase subunit beta [Mycoplasma
           gallisepticum str. R(low)]
 gi|284930288|gb|ADC30227.1| Ribonucleoside-diphosphate reductase subunit beta [Mycoplasma
           gallisepticum str. R(high)]
          Length = 339

 Score = 45.4 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 10/135 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +          + P    +E+++    +L++   LE  + 
Sbjct: 198 LPNTSDIIRLILRDKVIHNYYSGYKYRLKVQKLPKEKQEEYKKFVFEILYKLIELEKDFL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
            E       GL A     +  + A +     G E  F     K +   F  +S   D   
Sbjct: 258 RELY--DGFGL-ADEAIAFSLYNAGKFLQNCGYESPFTPEETKISPEVFAQLSARADENH 314

Query: 116 EKNFFETRVTEYQQG 130
             +FF    + Y  G
Sbjct: 315 --DFFSGNGSSYIMG 327


>gi|197294249|ref|YP_001798790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Phytoplasma australiense]
 gi|171853576|emb|CAM11447.1| Ribonucleotide reductase, beta subunit [Candidatus Phytoplasma
           australiense]
          Length = 344

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 52/135 (38%), Gaps = 6/135 (4%)

Query: 5   AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
            E    I+RDES+H  +   +  ++         KE +      +      ++    E  
Sbjct: 209 GEIINLIIRDESIHGVYIGRLATELYHLFDDDTKKELKTWLDATMKTLYKEQMELVKEVY 268

Query: 65  PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFETR 123
            K  +       ++++++ AN+    +G +  F   EN  P +   ++ + +  + F  +
Sbjct: 269 SK--LSYLEEDVQKFVRYNANKALMNLGFDAFFP-EENVNPVVLNGLNTETKTMDNFSMK 325

Query: 124 VTEYQQ--GAGLKWD 136
              YQ+     LK +
Sbjct: 326 GNGYQKMLSEALKDE 340


>gi|261342124|ref|ZP_05969982.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315455|gb|EFC54393.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
          Length = 319

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L +    E++Y    
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQKGLEIVSEARREELKGFALDLLMDLYDNELSYTEAL 240

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
                        + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 241 YAGSGW---EDEVKAFLCYNANKALMNLGYEALFPPDMADVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK-----WD 136
           FF    + Y  G  ++     WD
Sbjct: 296 FFSGSGSSYVMGKAVETEDEDWD 318


>gi|71034151|ref|XP_766717.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
           strain Muguga]
 gi|68353674|gb|EAN34434.1| ribonucleotide-diphosphate reductase small subunit, putative
           [Theileria parva]
          Length = 326

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 10/90 (11%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMP---KG 67
           + +D  +H  F       ++        K  +     ++ EA  LE  +A++ +P     
Sbjct: 205 VSKDRHIHTRFAHCTFTLLQH-------KMLESDVVQLIKEALKLEYDFANKFLPLSLMA 257

Query: 68  FVGLNAPSCEQYMQFIANRRCHQIGLEPLF 97
              +       YM+++ N      G   L+
Sbjct: 258 ITQMLTDVLRGYMEWVGNNVLMVCGYRTLY 287


>gi|306827912|ref|ZP_07461179.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes ATCC 10782]
 gi|304429831|gb|EFM32873.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes ATCC 10782]
          Length = 337

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 10/135 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           + +     +L+E   LE AY 
Sbjct: 196 MPNTSDIIRLILRDKVIHNYYSGYKYQQKVARLSPEKQAKMKAFVFDLLYELIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
            E      +   A    ++  + A +    +G +  F     + +   F  +S   D   
Sbjct: 256 RELYAGFDL---AEDAIRFSLYNAGKFLQNLGYDSPFTDEETRVSPEVFAQLSARADENH 312

Query: 116 EKNFFETRVTEYQQG 130
             +FF    + Y  G
Sbjct: 313 --DFFSGNGSSYVMG 325


>gi|26553540|ref|NP_757474.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           penetrans HF-2]
 gi|26453546|dbj|BAC43878.1| ribonucleotide diphosphate reductase subunit beta [Mycoplasma
           penetrans HF-2]
          Length = 339

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 50/140 (35%), Gaps = 8/140 (5%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +    +  + I+RD+ +H  +      +   + P     E ++    +L++   LE  + 
Sbjct: 198 LPNTLDIIRLILRDKVIHNYYSGYKYQKKVAKLPPEKQAEMKKFVFDLLYQVIDLEKEFL 257

Query: 61  HETMPKGFVGLN-APSCEQYMQFIANRRCHQIGLEPLFKYTENPFP---WMSEVIDLKKE 116
           +E       G N A    ++  + A +    +G +  F   E       ++       + 
Sbjct: 258 NELY----AGFNIADQAIKFSVYNAGKFLQNLGYDSPFTPEETEIKPEIFVQLSARADEN 313

Query: 117 KNFFETRVTEYQQGAGLKWD 136
            +FF    + Y  G   + D
Sbjct: 314 HDFFSGSGSSYIMGNVEETD 333


>gi|225869986|ref|YP_002745933.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           equi subsp. equi 4047]
 gi|225699390|emb|CAW92836.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           equi subsp. equi 4047]
          Length = 337

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 50/142 (35%), Gaps = 9/142 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           E +     +L++   LE AY 
Sbjct: 196 MPNTSDIIRLILRDKVIHNYYSGYKYQQKVAALSPEKQAEMKAFVFDLLYQLIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E      +   A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 256 RELYDGFDL---ADDAIRFSVYNAGKFLQNLGYDSPFTEEETRISPEVFAQLSARADENH 312

Query: 119 -FFETRVTEYQQGA---GLKWD 136
            FF    + Y  G     +  D
Sbjct: 313 DFFSGNGSSYVMGVTEETIDDD 334


>gi|195977665|ref|YP_002122909.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|195974370|gb|ACG61896.1| ribonucleotide reductase of class Ib (aerobic) beta subunit NrdF
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 337

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           E +     +L++   LE AY 
Sbjct: 196 MPNTSDIIRLILRDKVIHNYYSGYKYQQKVAALSPEKQAEMKAFVFDLLYQLIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E      +   A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 256 RELYDGFDL---ADDAIRFSVYNAGKFLQNLGYDSPFTEEETRISPEVFAQLSARADENH 312

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 313 DFFSGNGSSYVMG 325


>gi|225869037|ref|YP_002744985.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           equi subsp. zooepidemicus]
 gi|225702313|emb|CAX00111.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           equi subsp. zooepidemicus]
          Length = 337

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           E +     +L++   LE AY 
Sbjct: 196 MPNTSDIIRLILRDKVIHNYYSGYKYQQKVAALSPEKQAEMKAFVFDLLYQLIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E      +   A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 256 RELYDGFDL---ADDAIRFSVYNAGKFLQNLGYDSPFTEEETRISPEVFAQLSARADENH 312

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 313 DFFSGNGSSYVMG 325


>gi|322411231|gb|EFY02139.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 337

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 10/135 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           E +     +L+E   LE AY 
Sbjct: 196 MPNTSDIIRLILRDKVIHNYYSGYKYQQKVAGLSPEKQTEMKTFVFDLLYELIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
            E      +   A    ++  + A +    +G E  F     + +   F  +S   D   
Sbjct: 256 KELYDGFDL---AEDAIRFSLYNAGKFLQNLGYESPFTEEETRVSPEVFAQLSARADENH 312

Query: 116 EKNFFETRVTEYQQG 130
             +FF    + Y  G
Sbjct: 313 --DFFSGNGSSYVMG 325


>gi|331703804|ref|YP_004400491.1| ribonucleoside diphosphate reductase 2 betachain [Mycoplasma
           mycoides subsp. capri LC str. 95010]
 gi|256383837|gb|ACU78407.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           mycoides subsp. capri str. GM12]
 gi|256384668|gb|ACU79237.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           mycoides subsp. capri str. GM12]
 gi|296455270|gb|ADH21505.1| ribonucleoside-diphosphate reductase, beta subunit [synthetic
           Mycoplasma mycoides JCVI-syn1.0]
 gi|328802359|emb|CBW54513.1| Ribonucleoside diphosphate reductase 2 betachain [Mycoplasma
           mycoides subsp. capri LC str. 95010]
          Length = 339

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 52/137 (37%), Gaps = 6/137 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   + P     E ++    +L+E   LE AY 
Sbjct: 198 LPNTSDIIRLILRDKVIHNYYSGYKYQKKVAKLPVEKQAEMKEFVFKLLYELIDLETAYL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E      +        ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 258 KELYAGFDI---VDDAIRFSVYNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENH 314

Query: 119 -FFETRVTEYQQGAGLK 134
            FF    + Y  G  ++
Sbjct: 315 DFFSGNGSSYVMGVSVE 331


>gi|16766119|ref|NP_461734.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|167992529|ref|ZP_02573627.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168233769|ref|ZP_02658827.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194469894|ref|ZP_03075878.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197251114|ref|YP_002147708.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|204929699|ref|ZP_03220773.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|238909579|ref|ZP_04653416.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|585861|sp|P17424|RIR4_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 2 subunit beta;
           AltName: Full=R2F protein; AltName: Full=Ribonucleotide
           reductase 2
 gi|4389108|pdb|2R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium (Oxidized)
 gi|4389109|pdb|2R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium (Oxidized)
 gi|4389155|pdb|1R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium
 gi|4389156|pdb|1R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium
 gi|109157246|pdb|2BQ1|I Chain I, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
           Salmonella Typhimurium
 gi|109157247|pdb|2BQ1|J Chain J, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
           Salmonella Typhimurium
 gi|311979|emb|CAA51695.1| ribonucleoside-diphosphate reductase [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|16421357|gb|AAL21693.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|194456258|gb|EDX45097.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197214817|gb|ACH52214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|204321418|gb|EDZ06618.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205329263|gb|EDZ16027.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205332191|gb|EDZ18955.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|261247949|emb|CBG25782.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994924|gb|ACY89809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301159373|emb|CBW18891.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312913831|dbj|BAJ37805.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|321223605|gb|EFX48670.1| Ribonucleotide reductase of class Ib aerobic, beta subunit
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|323131164|gb|ADX18594.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
          Length = 319

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +   +  +E +  +  +L E    EI Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRY-TEA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
           +      +N    + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 240 LYAETGWVN--DVKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKTVE 311


>gi|157310978|ref|YP_001468974.1| putative ribonucleotide reductase [Corynebacterium phage P1201]
 gi|95832126|gb|ABF57526.1| putative ribonucleotide reductase [Corynebacterium phage P1201]
          Length = 237

 Score = 45.0 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 18/138 (13%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + IMRDE +H  +      ++            +++   +     + EI    E 
Sbjct: 100 TADLIRLIMRDEGVHGYYLGYKFQKVMEGALPYERDAVKERVTNLACRLFVNEIPLIEEI 159

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEV---------IDLK 114
                +GL+A   + ++++  N+    +GLE +F         M+ V         +D +
Sbjct: 160 YE--PLGLSAQ-VQTFLRYNLNKAMQNLGLENVFPAE------MTRVEPRILSQLSVDSE 210

Query: 115 KEKNFFETRVTEYQQGAG 132
           +  +FF    + Y  G  
Sbjct: 211 ETHDFFSGSGSSYVIGQA 228


>gi|168238723|ref|ZP_02663781.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|194737146|ref|YP_002115764.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|194712648|gb|ACF91869.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197288484|gb|EDY27861.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
          Length = 319

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +   +  +E +  +  +L E    EI Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRY-TEA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
           +      +N    + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 240 LYAETGWVN--DVKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKTVE 311


>gi|189490606|ref|YP_001957176.1| hypothetical ribonucleotide reductase beta subunit [Pseudomonas
           phage 201phi2-1]
 gi|164609671|gb|ABY63280.1| hypothetical ribonucleotide reductase beta subunit [Pseudomonas
           phage 201phi2-1]
          Length = 386

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 23/125 (18%)

Query: 11  IMRDE-SLHLNFGIDVIN-QIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM--PK 66
           I +DE  +H  FG +VI   +K E   +  ++ + +   +  E  + E+ +        +
Sbjct: 230 IAQDEYEIHAQFGQEVIKALLKTERGLIAYEDTKAECIKLFWEILMSEVNWLIYLFSEGR 289

Query: 67  GFVGLNAPSCEQYMQFIAN---------------RRCHQI---GLEPLFKYTENPFPWMS 108
              G+      Q++ F  N                R   +   G E  F   +NP P+M 
Sbjct: 290 ELPGVTLKKMVQWVLFNCNAAGTFTGHKDGITDEMRAEFLATTGFELEFP-DKNPLPYMV 348

Query: 109 EVIDL 113
           E +DL
Sbjct: 349 EYLDL 353


>gi|322614368|gb|EFY11299.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322621567|gb|EFY18420.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624428|gb|EFY21261.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322626626|gb|EFY23431.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322633514|gb|EFY30256.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322638443|gb|EFY35141.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322639746|gb|EFY36430.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322643792|gb|EFY40342.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649478|gb|EFY45912.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322655932|gb|EFY52232.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322661327|gb|EFY57552.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322662525|gb|EFY58733.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322666899|gb|EFY63074.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322671269|gb|EFY67392.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322677724|gb|EFY73787.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322681449|gb|EFY77479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322683848|gb|EFY79858.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323193763|gb|EFZ78966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323197449|gb|EFZ82586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323203264|gb|EFZ88293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323205210|gb|EFZ90185.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323212777|gb|EFZ97588.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218081|gb|EGA02793.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323221656|gb|EGA06069.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323225124|gb|EGA09375.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323230844|gb|EGA14962.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323234805|gb|EGA18891.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323238844|gb|EGA22894.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323241544|gb|EGA25575.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323248309|gb|EGA32245.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323252925|gb|EGA36759.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323256953|gb|EGA40662.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323260572|gb|EGA44183.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264370|gb|EGA47876.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323269504|gb|EGA52957.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
          Length = 319

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +   +  +E +  +  +L E    EI Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
           +      +N    + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 240 LYAETDWVN--DVKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKTVE 311


>gi|237784654|ref|YP_002905359.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237757566|gb|ACR16816.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 350

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 44/113 (38%), Gaps = 23/113 (20%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +    +P     E Q+ + +++ E   LE  Y+ E 
Sbjct: 196 TADMIRLILRDKAVHGYYSGYKFQRGLDAHPERKN-ELQEFTYSLVDELLNLEKIYSGEL 254

Query: 64  MPKGFVGLNAPS------------------CEQYMQFIANRRCHQIGLEPLFK 98
                 G+ AP+                     ++ + AN+    +G   L++
Sbjct: 255 YG----GITAPNNSHKSAESSFTSRPNFAGVMAFVYYNANKALMNLGYPALYE 303


>gi|14970916|emb|CAC44510.1| putative ribonucleotide reductase small subunit [Sphaerechinus
           granularis]
          Length = 141

 Score = 44.6 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query: 1   MVGIAEQYQYIMRDESLH 18
           M G+    + I RDE LH
Sbjct: 124 MPGLTFSNELISRDEGLH 141


>gi|302190764|ref|ZP_07267018.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           iners AB-1]
 gi|309804064|ref|ZP_07698145.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LactinV 11V1-d]
 gi|309804878|ref|ZP_07698940.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LactinV 09V1-c]
 gi|309807870|ref|ZP_07701802.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LactinV 01V1-a]
 gi|309809732|ref|ZP_07703586.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners SPIN 2503V10-D]
 gi|312871305|ref|ZP_07731403.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 3008A-a]
 gi|312872703|ref|ZP_07732768.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 2062A-h1]
 gi|312873302|ref|ZP_07733357.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 2052A-d]
 gi|312874885|ref|ZP_07734904.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 2053A-b]
 gi|315654122|ref|ZP_07907038.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           iners ATCC 55195]
 gi|325912248|ref|ZP_08174645.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners UPII 143-D]
 gi|325913678|ref|ZP_08176040.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners UPII 60-B]
 gi|329919824|ref|ZP_08276775.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners SPIN 1401G]
 gi|308163832|gb|EFO66098.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LactinV 11V1-d]
 gi|308165817|gb|EFO68038.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LactinV 09V1-c]
 gi|308168972|gb|EFO71058.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LactinV 01V1-a]
 gi|308169911|gb|EFO71950.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners SPIN 2503V10-D]
 gi|311089630|gb|EFQ48055.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 2053A-b]
 gi|311091182|gb|EFQ49571.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 2052A-d]
 gi|311091745|gb|EFQ50124.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 2062A-h1]
 gi|311093319|gb|EFQ51665.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 3008A-a]
 gi|315488818|gb|EFU78464.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           iners ATCC 55195]
 gi|325475907|gb|EGC79076.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners UPII 143-D]
 gi|325477037|gb|EGC80187.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners UPII 60-B]
 gi|328937171|gb|EGG33599.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners SPIN 1401G]
          Length = 337

 Score = 44.6 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +      Q   +       E +     +L++   LE AY 
Sbjct: 196 LPNTADIIRLILRDKVIHNYYSGYKYQQKLAKLAPQRQAEMKDFVFALLYKLIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKN- 118
            E      +   A    ++  + A +    +G +  F +   +  P +   +  + ++N 
Sbjct: 256 RELYKGFDI---AEDAIRFSIYNAGKFLQNLGYDSPFTEAETHIAPEVLAQLSARADENH 312

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 313 DFFSGNGSSYVMG 325


>gi|323467364|gb|ADX71051.1| Ribonucleoside-diphosphate reductase 2 alpha subunit [Lactobacillus
           helveticus H10]
          Length = 340

 Score = 44.6 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 15/146 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +          +       E ++     L +   LE  Y 
Sbjct: 199 LPNTADIIRLILRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFNFLDKLIDLEKKYL 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
           HE      +         +  + A +    +G +  F       +   F  +S   D   
Sbjct: 259 HELYDDFDL---VDDAIHFSLYNAGKFLQNLGYDSPFTAEETYISPEVFAQLSAQADENH 315

Query: 116 EKNFFETRVTEYQQGAGLK-----WD 136
             +FF    + Y  G G +     WD
Sbjct: 316 --DFFSGNGSSYVMGTGEETKDDDWD 339


>gi|238896131|ref|YP_002920867.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238548449|dbj|BAH64800.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 333

 Score = 44.6 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L +    E+AY+ E 
Sbjct: 195 TADLIRLIIRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSREL 254

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +            ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 255 YGESGW---FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPA--ILAALSPNADENHD 309

Query: 119 FFETRVTEYQQG-----AGLKWD 136
           FF    + Y  G     A   WD
Sbjct: 310 FFSGSGSSYVIGKMEETADDDWD 332


>gi|259907588|ref|YP_002647944.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           pyrifoliae Ep1/96]
 gi|224963210|emb|CAX54694.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           pyrifoliae Ep1/96]
 gi|283477430|emb|CAY73346.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           pyrifoliae DSM 12163]
          Length = 319

 Score = 44.6 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I++DE++H  +      +   +   L  +E QQ +  +L E    E+AY  E 
Sbjct: 181 TADLIRLIIKDEAVHGYYIGYKYQKALEKETPLRKEELQQFAIELLLELYENELAY-TEA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
           +  G  G      ++++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 240 LYAGV-GW-QEDVKKFLHYNANKALMNLGYEALFPADMTDVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 296 FFSGSGSSYVMGKAVDTQDEDWD 318


>gi|70606887|ref|YP_255757.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           acidocaldarius DSM 639]
 gi|68567535|gb|AAY80464.1| hypothetical protein Saci_1112 [Sulfolobus acidocaldarius DSM 639]
          Length = 308

 Score = 44.6 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 6/93 (6%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
            G+A+   YI  DES H+ FG  +I ++  E      K   +    +   A  +   ++ 
Sbjct: 197 PGLAKMVNYIATDESRHIAFGTYLIARLIKEGGESVYKAAMEHINYLGPYAVGI---FSE 253

Query: 62  ETMPKGF---VGLNAPSCEQYMQFIANRRCHQI 91
             +P+G    + LN     +Y + + N R   I
Sbjct: 254 PNVPQGVEIPLKLNPEVTVEYAKKLLNVRIQAI 286


>gi|259500785|ref|ZP_05743687.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus iners DSM
           13335]
 gi|259167479|gb|EEW51974.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus iners DSM
           13335]
          Length = 339

 Score = 44.6 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +      Q   +       E +     +L++   LE AY 
Sbjct: 198 LPNTADIIRLILRDKVIHNYYSGYKYQQKLAKLAPQRQAEMKDFVFALLYKLIDLEKAYL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKN- 118
            E      +   A    ++  + A +    +G +  F +   +  P +   +  + ++N 
Sbjct: 258 RELYKGFDI---AEDAIRFSIYNAGKFLQNLGYDSPFTEAETHIAPEVLAQLSARADENH 314

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 315 DFFSGNGSSYVMG 327


>gi|330013348|ref|ZP_08307619.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|328533536|gb|EGF60259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 320

 Score = 44.2 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L +    E+AY+ E 
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSREL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +            ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 242 YGESGW---FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPA--ILAALSPNADENHD 296

Query: 119 FFETRVTEYQQG-----AGLKWD 136
           FF    + Y  G     A   WD
Sbjct: 297 FFSGSGSSYVIGKMEETADDDWD 319


>gi|168262084|ref|ZP_02684057.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|205349275|gb|EDZ35906.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
          Length = 319

 Score = 44.2 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +   +  KE +  +  +L E    EI Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIERKELKLFALDLLMELYDNEICY-TEA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
           +      +N    + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 240 LYAETGWVN--DVKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKTVE 311


>gi|288933942|ref|YP_003438001.1| ribonucleoside-diphosphate reductase [Klebsiella variicola At-22]
 gi|290510980|ref|ZP_06550349.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           1_1_55]
 gi|288888671|gb|ADC56989.1| Ribonucleoside-diphosphate reductase [Klebsiella variicola At-22]
 gi|289775973|gb|EFD83972.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           1_1_55]
          Length = 320

 Score = 44.2 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L +    E+AY+ E 
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSREL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +            ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 242 YGESGW---FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPA--ILAALSPNADENHD 296

Query: 119 FFETRVTEYQQG-----AGLKWD 136
           FF    + Y  G     A   WD
Sbjct: 297 FFSGSGSSYVIGKTEETADDDWD 319


>gi|42561374|ref|NP_975825.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           mycoides subsp. mycoides SC str. PG1]
 gi|42492872|emb|CAE77467.1| ribonucleoside-diphosphate reductase 2 beta chain [Mycoplasma
           mycoides subsp. mycoides SC str. PG1]
 gi|301321363|gb|ADK70006.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           mycoides subsp. mycoides SC str. Gladysdale]
          Length = 339

 Score = 44.2 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 52/137 (37%), Gaps = 6/137 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   + P     E ++    +L+E   LE AY 
Sbjct: 198 LPNTSDIIRLILRDKVIHNYYSGYKYQKKVAKLPVEKQTEMKEFVFKLLYELIDLETAYL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E      +        ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 258 KELYAGFDI---VDDAIRFSVYNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENH 314

Query: 119 -FFETRVTEYQQGAGLK 134
            FF    + Y  G  ++
Sbjct: 315 DFFSGNGSSYVMGVSVE 331


>gi|206577235|ref|YP_002236984.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|206566293|gb|ACI08069.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
          Length = 320

 Score = 44.2 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 10/132 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L +    E+AY+ E 
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSREL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +            ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 242 YGESGW---FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPA--ILAALSPNADENHD 296

Query: 119 FFETRVTEYQQG 130
           FF    + Y  G
Sbjct: 297 FFSGSGSSYVIG 308


>gi|152971534|ref|YP_001336643.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|150956383|gb|ABR78413.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
          Length = 320

 Score = 44.2 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L +    E+AY+ E 
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSREL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +            ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 242 YGESGW---FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPA--ILAALSPNADENHD 296

Query: 119 FFETRVTEYQQG-----AGLKWD 136
           FF    + Y  G     A   WD
Sbjct: 297 FFSGSGSSYVIGKMEETADDDWD 319


>gi|281207436|gb|EFA81619.1| hypothetical protein PPL_05610 [Polysphondylium pallidum PN500]
          Length = 1292

 Score = 44.2 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 7/68 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M  ++E Y +I+ +E  H  FG  + +++         K   +   +++ +A   E    
Sbjct: 203 MPKLSEYYSFIVSNEYTHCEFGRLLYSKLI-------NKLDTEMIESIIRDAVDCEKQIM 255

Query: 61  HETMPKGF 68
                   
Sbjct: 256 ESETGDSI 263


>gi|262043918|ref|ZP_06017006.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038772|gb|EEW39955.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 320

 Score = 44.2 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +          +E +  +  +L +    E+AY+ E 
Sbjct: 182 TADLIRLIIRDEAVHGYYIGYKYQKGLEIVSPGKREELKNFALDLLMDLYDNELAYSREL 241

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
             +            ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 242 YGESGW---FDDVSAFLCYNANKALMNLGYEALFPAEMAAVNPA--ILAALSPNADENHD 296

Query: 119 FFETRVTEYQQG-----AGLKWD 136
           FF    + Y  G     A   WD
Sbjct: 297 FFSGSGSSYVIGKMEETADDDWD 319


>gi|328958551|ref|YP_004375937.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
 gi|328674875|gb|AEB30921.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
          Length = 328

 Score = 44.2 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 35/97 (36%), Gaps = 3/97 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + ++ +ESLH  +          E       E +  +  +  +    E+ Y  + 
Sbjct: 190 VAEIIKLVLTNESLHCFYISHKFQLGFSELSQQEQTELRDWTFDLFVDLVNNELNYIEQI 249

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYT 100
             +          + +++  AN     +G + ++  +
Sbjct: 250 YYRTDW---LEEVKDFIRQQANNALKSLGFDTIYPES 283


>gi|310764903|gb|ADP09853.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia sp.
           Ejp617]
          Length = 319

 Score = 44.2 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I++DE++H  +      +   +   L  +E QQ +  +L E    E+AY  E 
Sbjct: 181 TADLIRLIIKDEAVHGYYIGYKYQKALEKETPLRKEELQQFAIELLLELYENELAY-TEA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
           +  G  G      ++++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 240 LYAGV-GW-QKDVKKFLHYNANKALMNLGYEALFPADMTDVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 296 FFSGSGSSYVMGKAVDTQDEDWD 318


>gi|224584592|ref|YP_002638390.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|224469119|gb|ACN46949.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
          Length = 319

 Score = 43.8 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +   +  +E +  +  +L E    EI Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
           +      +N    + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 240 LYAETGWVN--DVKAFLCYNANKALMNLGYEALFPPEIADVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKTVE 311


>gi|221104331|ref|XP_002154681.1| PREDICTED: similar to ribonucleotide reductase small subunit,
           partial [Hydra magnipapillata]
          Length = 261

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIK 30
           M G+ +    I +DE +H  FG  +   I 
Sbjct: 224 MKGLIQSNNLIAKDEGMHTIFGCVIYTFII 253


>gi|284009251|emb|CBA76360.1| ribonucleoside-diphosphate reductase beta chain [Arsenophonus
           nasoniae]
          Length = 321

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 18/140 (12%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +      +  I+       E +  +  +L      EI Y+   
Sbjct: 183 TADLIRLIIRDEAIHGYYIGYKFQKSLIKYSDKEKDEIKDFAYLLLLNLYENEIKYSESL 242

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI---------DLK 114
                VG      ++++ + AN+    +G E LF  T      M++V          +  
Sbjct: 243 Y--DEVGWT-EDVKKFLHYNANKALMNLGYESLFPET------MTDVSPAILSALSPNAN 293

Query: 115 KEKNFFETRVTEYQQGAGLK 134
           +  +FF    + Y  G  + 
Sbjct: 294 ENHDFFSGSGSSYIIGKTIT 313


>gi|328710829|ref|XP_003244373.1| PREDICTED: hypothetical protein LOC100575936 [Acyrthosiphon pisum]
          Length = 66

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 5/53 (9%)

Query: 77  EQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETR--VTEY 127
           + Y+   A+R   ++G +       +PF    E+   + + NFFE R   T Y
Sbjct: 8   KIYIGDFADRLLKELGFQQFTGRQTHPF---MELTPQQGKTNFFERRLSNTNY 57


>gi|168244605|ref|ZP_02669537.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168464072|ref|ZP_02697989.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194442875|ref|YP_002042053.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194450827|ref|YP_002046771.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194401538|gb|ACF61760.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194409131|gb|ACF69350.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|195633109|gb|EDX51523.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|205336532|gb|EDZ23296.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
          Length = 319

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +   +  +E +  +  +L E    EI Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALNLLMELYDNEIRY-TEA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
           +      +N    + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 240 LYAETGWVN--DVKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKTVE 311


>gi|198241755|ref|YP_002216784.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|197936271|gb|ACH73604.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|326624542|gb|EGE30887.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 319

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +   +  +E +  +  +L E    EI Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
           +      +N    + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 240 LYAETGWVN--DVKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKTVE 311


>gi|62181312|ref|YP_217729.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161615703|ref|YP_001589668.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167552693|ref|ZP_02346445.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|168822877|ref|ZP_02834877.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|197265553|ref|ZP_03165627.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205353758|ref|YP_002227559.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|207858077|ref|YP_002244728.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|62128945|gb|AAX66648.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161365067|gb|ABX68835.1| hypothetical protein SPAB_03488 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197243808|gb|EDY26428.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205273539|emb|CAR38525.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205322691|gb|EDZ10530.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205340791|gb|EDZ27555.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|206709880|emb|CAR34233.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|320087214|emb|CBY96980.1| ribonucleoside-diphosphate reductase beta chain [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|322715798|gb|EFZ07369.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
 gi|326628866|gb|EGE35209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 319

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +   +  +E +  +  +L E    EI Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
           +      +N    + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 240 LYAETGWVN--DVKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKTVE 311


>gi|241895721|ref|ZP_04783017.1| ribonucleotide-diphosphate reductase subunit beta [Weissella
           paramesenteroides ATCC 33313]
 gi|241871088|gb|EER74839.1| ribonucleotide-diphosphate reductase subunit beta [Weissella
           paramesenteroides ATCC 33313]
          Length = 318

 Score = 43.8 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 7/120 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +AE  + I+RDES+H  +          E       E +     +L +    E  Y    
Sbjct: 180 VAEIIKLILRDESVHGTYIGYKFQLGFNELSTDEQNELKTWLYDLLLDLYGNEEKYTKLL 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKNFF 120
                +G    S   ++++ AN+    +G +PLF       NP   M+ +       +FF
Sbjct: 240 Y--DEIGWT-ESVLTFLRYNANKALMNLGQDPLFPDGAEDVNPIV-MNGISTTTSNHDFF 295


>gi|85057306|ref|YP_456222.1| ribonucleotide-diphosphate reductase subunit beta [Aster yellows
           witches'-broom phytoplasma AYWB]
 gi|84789411|gb|ABC65143.1| ribonucleoside-diphosphate reductase beta chain [Aster yellows
           witches'-broom phytoplasma AYWB]
          Length = 350

 Score = 43.5 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 54/128 (42%), Gaps = 7/128 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  +    + ++  E   L+ K  +Q  +T L +            
Sbjct: 215 SGEIINLIIRDESIHGVY----VGRLATELYQLFDKPTKQTLKTWLDDLMQQLYQTKTSL 270

Query: 64  MPKGFVGLN-APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFFE 121
           +   +  LN      +++++ AN+    +G +  F  +EN  P +   ++ + +  + F 
Sbjct: 271 VNAIYHKLNLEDDVNKFVRYNANKALMNLGFDAFFP-SENVNPVIINGLNTETKTMDNFS 329

Query: 122 TRVTEYQQ 129
            +   YQ+
Sbjct: 330 MKGNGYQK 337


>gi|200386806|ref|ZP_03213418.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199603904|gb|EDZ02449.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
          Length = 319

 Score = 43.5 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 10/136 (7%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RDE++H  +          +   +  +E +  +  +L E    EI Y  E 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEICY-TEA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVIDLKKEKN-- 118
           +      +N    + ++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 240 LYAETGWVN--DVKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGLK 134
           FF    + Y  G  ++
Sbjct: 296 FFSGSGSSYVMGKTVE 311


>gi|15829010|ref|NP_326370.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           pulmonis UAB CTIP]
 gi|14089954|emb|CAC13712.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (RIBONUCLEOTIDE
           REDUCTASE) [Mycoplasma pulmonis]
          Length = 341

 Score = 43.5 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 53/133 (39%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   +      KE ++    +L++   LE  Y 
Sbjct: 200 LPNTSDIIRLILRDKVIHNYYSGYKYQKKVEKLSLEKQKEMKEFVFDLLYKLIDLEKKYL 259

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP-WMSEVIDLKKEKN- 118
           +E   +  +GL A    ++  + A +    +G +  F   E      +   +  + ++N 
Sbjct: 260 YELYEE--IGL-AEDAIKFSLYNAGKFLQNLGYDSPFTSEETKIDAEIFSQLSARADENH 316

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 317 DFFSGNGSSYVMG 329


>gi|50365347|ref|YP_053772.1| ribonucleotide-diphosphate reductase subunit beta [Mesoplasma
           florum L1]
 gi|50363903|gb|AAT75888.1| ribonucleoside-diphosphate reductase beta chain [Mesoplasma florum
           L1]
          Length = 340

 Score = 43.1 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 6/135 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   +       E ++    +L+E   LE AY 
Sbjct: 199 LPNTSDIIRLILRDKVIHNYYSGYKYQKKVAKLSPEKQAEMKEFVFKLLYELIDLEKAYL 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E       GL A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 259 KELYED--FGL-ADDAIRFSVYNAGKFLQNLGYDSPFTEEETRIEPEIFTQLSARADENH 315

Query: 119 -FFETRVTEYQQGAG 132
            FF    + Y  G  
Sbjct: 316 DFFSGNGSSYIMGVS 330


>gi|251781888|ref|YP_002996190.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390517|dbj|BAH80976.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|323126699|gb|ADX23996.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 337

 Score = 43.1 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 10/135 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M   ++  + I+RD+ +H  +      Q           E +     +L+E   LE AY 
Sbjct: 196 MSNTSDIIRLILRDKVIHNYYSGYKYQQKVAGLSPEKQAEMKTFVFDLLYELIDLEKAYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
            E      +   A    ++  + A +    +G E  F     + +   F  +S   D   
Sbjct: 256 KELYDGFDL---AEDAIRFSLYNAGKFLQNLGYESPFTEEETRVSPEVFAQLSARADENH 312

Query: 116 EKNFFETRVTEYQQG 130
             +FF    + Y  G
Sbjct: 313 --DFFSGNGSSYVMG 325


>gi|292489180|ref|YP_003532067.1| ribonucleoside-diphosphate reductase 2 subunit beta [Erwinia
           amylovora CFBP1430]
 gi|292900297|ref|YP_003539666.1| ribonucleoside-diphosphate reductase 2 subunit beta [Erwinia
           amylovora ATCC 49946]
 gi|291200145|emb|CBJ47271.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           amylovora ATCC 49946]
 gi|291554614|emb|CBA22274.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           amylovora CFBP1430]
          Length = 319

 Score = 43.1 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I++DE++H  +      +   +      +E QQ +  +L E    E+AY  + 
Sbjct: 181 TADLIRLIIKDEAVHGYYIGYKYQKALEKETPQRKEELQQFAIELLLELYENELAY-TDA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
           +  G  G      ++++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 240 LYSGV-GW-QEDVKKFLHYNANKALMNLGYEALFPAEMTDVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 296 FFSGSGSSYVMGKAVDTEDEDWD 318


>gi|13508061|ref|NP_110010.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           pneumoniae M129]
 gi|2500211|sp|P75461|RIR2_MYCPN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1674208|gb|AAB96162.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma
           pneumoniae M129]
 gi|301633274|gb|ADK86828.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           pneumoniae FH]
          Length = 339

 Score = 43.1 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   +       E ++    +++E   LE AY 
Sbjct: 198 LPNTSDIIRLILRDKVIHNYYSGYKFQRKVEKMSKEKQAEMKRFVFDLMYELIELEKAYL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E       G+      ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 258 KELYEG--FGI-VEDAIKFSIYNAGKFLQNLGYDSPFTEEETRIKPEIFAQLSARADENH 314

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 315 DFFSGNGSSYVMG 327


>gi|300859142|ref|YP_003784125.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686596|gb|ADK29518.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206836|gb|ADL11178.1| Ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
           pseudotuberculosis C231]
 gi|302331398|gb|ADL21592.1| Ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium
           pseudotuberculosis 1002]
 gi|308277088|gb|ADO26987.1| Ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium
           pseudotuberculosis I19]
          Length = 340

 Score = 43.1 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 27/152 (17%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +     P     E +  + +   E   LE  Y+ + 
Sbjct: 196 TADMIRLILRDKAVHGYYSGYKYQRGLDAKPQRK-DEMEDFTYSFCDELLALEKDYSADL 254

Query: 64  M--------PKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDL-- 113
                    P+  +         ++ + A++    +G  P ++        +S  I    
Sbjct: 255 YASVDTLEEPRPTI----DGVMAFVYYNADKALMNLGYAPAYELQA---AHVSPEIIAAL 307

Query: 114 ----KKEKNFFETRVTEYQQGAG-----LKWD 136
                +  +FF    + Y  G         WD
Sbjct: 308 TPESNETHDFFSGSGSSYIIGRAENTTESDWD 339


>gi|297243045|ref|ZP_06926983.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis AMD]
 gi|296889256|gb|EFH27990.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis AMD]
          Length = 364

 Score = 43.1 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 53/139 (38%), Gaps = 6/139 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  A+  + I+RD+++H  +      +          K  ++ +  +L     LE+ Y+
Sbjct: 223 MMNTADMIRLILRDKAIHGYYSGYKFQRGLELRSENDKKNLEKFTMNLLDTLYDLEVEYS 282

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKN- 118
            +                ++++ AN+    +G    + +   +  P +   +    ++N 
Sbjct: 283 GQIYEGFDF---HDDVFDFVRYNANKALMNLGYPAKYSEEETHVSPEILAALSPAADENH 339

Query: 119 -FFETRVTEYQQGAGLKWD 136
            FF    + Y  G  ++ D
Sbjct: 340 DFFSGSGSSYIMGKSVETD 358


>gi|312173339|emb|CBX81594.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           amylovora ATCC BAA-2158]
          Length = 319

 Score = 43.1 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 15/143 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I++DE++H  +      +   +      +E QQ +  +L E    E+AY  + 
Sbjct: 181 TADLIRLIIKDEAVHGYYIGYKYQKALEKETPQRKEELQQFAIELLLELYENELAY-TDA 239

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKY---TENPFPWMSEVIDLKKEKN-- 118
           +  G  G      ++++ + AN+    +G E LF       NP   +   +    ++N  
Sbjct: 240 LYSGV-GW-QEDVKKFLHYNANKALMNLGYEALFPAEMTDVNPA--ILAALSPNADENHD 295

Query: 119 FFETRVTEYQQGAGL-----KWD 136
           FF    + Y  G  +      WD
Sbjct: 296 FFSGSGSSYVMGKAVDTEDEDWD 318


>gi|308235083|ref|ZP_07665820.1| ribonucleoside-diphosphate reductase, beta subunit [Gardnerella
           vaginalis ATCC 14018]
 gi|311115217|ref|YP_003986438.1| ribonucleotide-diphosphate reductase subunit beta [Gardnerella
           vaginalis ATCC 14019]
 gi|310946711|gb|ADP39415.1| ribonucleotide-diphosphate reductase subunit beta [Gardnerella
           vaginalis ATCC 14019]
          Length = 364

 Score = 43.1 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 53/139 (38%), Gaps = 6/139 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  A+  + I+RD+++H  +      +          K  ++ +  +L     LE+ Y+
Sbjct: 223 MMNTADMIRLILRDKAIHGYYSGYKFQRGLELRSENDKKNLEKFTMNLLDTLYDLEVEYS 282

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKN- 118
            +                ++++ AN+    +G    + +   +  P +   +    ++N 
Sbjct: 283 GQIYEGFDF---HDDVFDFVRYNANKALMNLGYPAKYSEEETHVSPEILAALSPAADENH 339

Query: 119 -FFETRVTEYQQGAGLKWD 136
            FF    + Y  G  ++ D
Sbjct: 340 DFFSGSGSSYIMGKSVETD 358


>gi|283782686|ref|YP_003373440.1| ribonucleoside-diphosphate reductase, beta subunit [Gardnerella
           vaginalis 409-05]
 gi|283441437|gb|ADB13903.1| ribonucleoside-diphosphate reductase, beta subunit [Gardnerella
           vaginalis 409-05]
          Length = 359

 Score = 43.1 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 53/139 (38%), Gaps = 6/139 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  A+  + I+RD+++H  +      +          K  ++ +  +L     LE+ Y+
Sbjct: 218 MMNTADMIRLILRDKAIHGYYSGYKFQRGLELRSENDKKNLEKFTMNLLDTLYDLEVEYS 277

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVIDLKKEKN- 118
            +                ++++ AN+    +G    + +   +  P +   +    ++N 
Sbjct: 278 GQIYEGFDF---HDDVFDFVRYNANKALMNLGYPAKYSEEETHVSPEILAALSPAADENH 334

Query: 119 -FFETRVTEYQQGAGLKWD 136
            FF    + Y  G  ++ D
Sbjct: 335 DFFSGSGSSYIMGKSVETD 353


>gi|298253146|ref|ZP_06976938.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis 5-1]
 gi|297532541|gb|EFH71427.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis 5-1]
          Length = 331

 Score = 42.7 bits (100), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 52/139 (37%), Gaps = 6/139 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M+  A+  + I+RD+++H  +      +          K  ++ +  +L     LE+ Y+
Sbjct: 190 MMNTADMIRLILRDKAIHGYYSGYKFQRGLELRSENDKKNLEKFTMNLLDTLYDLEVEYS 249

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-KYTENPFPWMSEVID--LKKEK 117
            +                ++++ AN+    +G    + +   +  P +   +     +  
Sbjct: 250 GQIYEGFDF---HDDVFDFVRYNANKALMNLGYPAKYSEEETHVSPEILAALSPAADENH 306

Query: 118 NFFETRVTEYQQGAGLKWD 136
           +FF    + Y  G  ++ D
Sbjct: 307 DFFSGSGSSYIMGKSVETD 325


>gi|39938541|ref|NP_950307.1| ribonucleotide-diphosphate reductase subunit beta [Onion yellows
           phytoplasma OY-M]
 gi|39721650|dbj|BAD04140.1| ribonucleotide reductase beta subunit [Onion yellows phytoplasma
           OY-M]
          Length = 350

 Score = 42.7 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 55/129 (42%), Gaps = 9/129 (6%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
             E    I+RDES+H  +    + ++  E   L+ K  QQ  +T L +        A  +
Sbjct: 215 SGEIINLIIRDESIHGVY----VGRLATEIYQLFDKPTQQTLKTWLDDLMQQLYQ-AQTS 269

Query: 64  MPKGF-VGLN-APSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEK-NFF 120
           +       LN      +++++ AN+    +G +  F  +EN  P +   ++ + +  + F
Sbjct: 270 LVHAIYHKLNLEDDVNKFVRYNANKALMNLGFDAFFP-SENVNPVIINGLNTETKTMDNF 328

Query: 121 ETRVTEYQQ 129
             +   YQ+
Sbjct: 329 SMKGNGYQK 337


>gi|320539491|ref|ZP_08039160.1| putative truncated ribonucleoside-diphosphate reductase 2, beta
           subunit, ferritin-like protein [Serratia symbiotica str.
           Tucson]
 gi|320030616|gb|EFW12626.1| putative truncated ribonucleoside-diphosphate reductase 2, beta
           subunit, ferritin-like protein [Serratia symbiotica str.
           Tucson]
          Length = 309

 Score = 42.7 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 38/95 (40%), Gaps = 3/95 (3%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A   + I+R E++H  +      +       +  ++ +  +  +LH+    E+ Y  + 
Sbjct: 185 TAHLIRLIIRYEAVHGYYIGYKFQKGLERVDVIRRQQVKNVAFDLLHDLYDNEVCYTQDL 244

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 98
                VG      + ++ + AN+    +G E LF 
Sbjct: 245 Y--DGVGWT-EDVKTFLHYNANKALMNLGYEALFP 276


>gi|281181724|dbj|BAI58041.1| putative ribonucleoside-diphosphate reductase [Edwardsiella tarda]
          Length = 169

 Score = 42.7 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 1   MVGIAEQYQYIMRDESLHL 19
           M G A+  + I RDE+LHL
Sbjct: 148 MEGNAKIIRLIARDEALHL 166


>gi|207112033|ref|ZP_03246195.1| hypothetical protein HpylH_23419 [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 32

 Score = 42.3 bits (99), Expect = 0.020,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 13/32 (40%)

Query: 58 AYAHETMPKGFVGLNAPSCEQYMQFIANRRCH 89
           +A   +     GLN      Y++++ N R  
Sbjct: 1  EWACYVIGNEVPGLNEKMITDYIRYLGNLRWK 32


>gi|83319806|ref|YP_424093.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
 gi|83283692|gb|ABC01624.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
          Length = 339

 Score = 42.3 bits (99), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 52/137 (37%), Gaps = 6/137 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   +       E ++    +L+E   LE AY 
Sbjct: 198 LPNTSDIVRLILRDKVIHNYYSGYKYQKKVAKLSVEKQAEMKEFVFKLLYELIDLETAYL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E      +   A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 258 KELYAGFDI---ADDAIRFSVYNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENH 314

Query: 119 -FFETRVTEYQQGAGLK 134
            FF    + Y  G  ++
Sbjct: 315 DFFSGNGSSYVMGVSVE 331


>gi|328553050|gb|AEB23542.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           amyloliquefaciens TA208]
          Length = 93

 Score = 42.3 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 48  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPW 106
           ML E    E+ Y  +      VGL AP  ++++++ AN+  + +G +  F+  + NP   
Sbjct: 1   MLQELYENELEYTEDVY--DQVGL-APDVKKFIRYNANKALNNLGFDHWFEEEDVNPI-- 55

Query: 107 MSEVIDLKKEK-NFFETRVTEYQQGAG 132
           +   +  K +  +FF  +   Y++   
Sbjct: 56  VINGLSTKTKSHDFFSMKGVGYKKATV 82


>gi|308233466|ref|ZP_07664203.1| ribonucleotide-diphosphate reductase subunit beta [Atopobium
           vaginae DSM 15829]
 gi|328943412|ref|ZP_08240877.1| ribonucleotide-diphosphate reductase subunit beta [Atopobium
           vaginae DSM 15829]
 gi|327491381|gb|EGF23155.1| ribonucleotide-diphosphate reductase subunit beta [Atopobium
           vaginae DSM 15829]
          Length = 339

 Score = 41.9 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 10/137 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      Q   +      +  +     ++++   LE AY 
Sbjct: 198 LPNTSDMIRLILRDKVIHNYYSGYKFQQKVRKLTSDEQQTVKDFVFDLMYQLIDLEKAYL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
            +      +   A    ++  + A +    +G +  F       +   F  +S   D   
Sbjct: 258 QDLYKDFDL---ADDAIRFSLYNAGKFLQNLGYDSPFSEQETYISPEVFAQLSARADENH 314

Query: 116 EKNFFETRVTEYQQGAG 132
             +FF    + Y  G  
Sbjct: 315 --DFFSGSGSSYVIGTS 329


>gi|16761590|ref|NP_457207.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29143070|ref|NP_806412.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|213052490|ref|ZP_03345368.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213424576|ref|ZP_03357365.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
 gi|213584527|ref|ZP_03366353.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
 gi|213650063|ref|ZP_03380116.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
 gi|289824437|ref|ZP_06544026.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25330821|pir||AH0841 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503891|emb|CAD05919.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29138703|gb|AAO70272.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
          Length = 319

 Score = 41.5 bits (97), Expect = 0.034,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 54/146 (36%), Gaps = 30/146 (20%)

Query: 4   IAEQYQYIMRDESLHLNF-------GIDVINQIKIENPHLWTKEFQQKSRT---MLHEAT 53
            A+  + I+RDE++H  +        +  ++ I+ E   L+  +   +         EA 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKHQIALQKLSAIEREELKLFALDLLMELYDNEICYTEAL 240

Query: 54  LLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEV 110
             E  + ++              + ++ + AN+    +G E LF       NP   +   
Sbjct: 241 YAETGWVND-------------VKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAA 285

Query: 111 IDLKKEKN--FFETRVTEYQQGAGLK 134
           +    ++N  FF    + Y  G  ++
Sbjct: 286 LSPNADENHDFFSGSGSSYVMGKTVE 311


>gi|48696469|ref|YP_024511.1| putative ribonucleotide reductase minor subunit [Staphylococcus
           phage K]
 gi|37729163|gb|AAO47530.1| ORF81 [Staphylococcus phage K]
 gi|119658118|gb|ABL87153.1| putative ribonucleotide reductase minor subunit [Staphylococcus
           phage 812]
 gi|182627942|gb|ACB89104.1| gp ORF111 [Staphylococcus phage A5W]
          Length = 349

 Score = 41.5 bits (97), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 17/142 (11%)

Query: 1   MVGIAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           M         I +DE+ H +          N +  E      KE    +  +L      E
Sbjct: 197 MTQSGAIIYKITQDEAYHGSAVGLTAQYDYNLLTEEEKKQADKE----TYELLDILYTNE 252

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKK 115
           +AY H       + L+      Y+Q+  NR    +G E  F     NP   +    ++ +
Sbjct: 253 VAYTHSLY--DPLELS-EDVINYVQYNFNRALQNLGREDYFNPEPYNPI--VENQTNVDR 307

Query: 116 EKN--FFETRVTEYQQGAGLKW 135
            +N  FF  +  +Y++   +K 
Sbjct: 308 LRNVDFFSGK-ADYEKSTNIKD 328


>gi|298247783|ref|ZP_06971588.1| ribonucleotide reductase [Ktedonobacter racemifer DSM 44963]
 gi|297550442|gb|EFH84308.1| ribonucleotide reductase [Ktedonobacter racemifer DSM 44963]
          Length = 293

 Score = 41.5 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTML 49
           M G+ +  QYI RDES H+ +G+ +I+++  ++  LW    + +   + 
Sbjct: 192 MPGLQQGIQYIKRDESRHIAYGVFLISRLVAQDKSLW-PIVEDRMNELF 239


>gi|213023521|ref|ZP_03337968.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 256

 Score = 41.5 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 54/146 (36%), Gaps = 30/146 (20%)

Query: 4   IAEQYQYIMRDESLHLNF-------GIDVINQIKIENPHLWTKEFQQKSRT---MLHEAT 53
            A+  + I+RDE++H  +        +  ++ I+ E   L+  +   +         EA 
Sbjct: 118 TADLIRLIIRDEAVHGYYIGYKHQIALQKLSAIEREELKLFALDLLMELYDNEICYTEAL 177

Query: 54  LLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEV 110
             E  + ++              + ++ + AN+    +G E LF       NP   +   
Sbjct: 178 YAETGWVND-------------VKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAA 222

Query: 111 IDLKKEKN--FFETRVTEYQQGAGLK 134
           +    ++N  FF    + Y  G  ++
Sbjct: 223 LSPNADENHDFFSGSGSSYVMGKTVE 248


>gi|330971158|gb|EGH71224.1| hypothetical protein PSYAR_11719 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 25

 Score = 41.1 bits (96), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/21 (80%), Positives = 19/21 (90%)

Query: 101 ENPFPWMSEVIDLKKEKNFFE 121
            NPFPWMSE+I LKKE+NFFE
Sbjct: 1   TNPFPWMSEIIALKKERNFFE 21


>gi|313665031|ref|YP_004046902.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           leachii PG50]
 gi|312949985|gb|ADR24581.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           leachii PG50]
          Length = 339

 Score = 41.1 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 51/137 (37%), Gaps = 6/137 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   +       E ++    +L+E   LE  Y 
Sbjct: 198 LPNTSDIVRLILRDKVIHNYYSGYKYQKKVAKLSVEKQAEMKEFVFKLLYELIDLETDYL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E      +   A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 258 KELYAGFDI---ADDAIRFSVYNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENH 314

Query: 119 -FFETRVTEYQQGAGLK 134
            FF    + Y  G  ++
Sbjct: 315 DFFSGNGSSYVMGVSVE 331


>gi|66394974|ref|YP_240948.1| ORF025 [Staphylococcus phage G1]
 gi|62636996|gb|AAX92107.1| ORF025 [Staphylococcus phage G1]
          Length = 265

 Score = 41.1 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 17/142 (11%)

Query: 1   MVGIAEQYQYIMRDESLHLNF----GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLE 56
           M         I +DE+ H +          N +  E      KE    +  +L      E
Sbjct: 113 MTQSGAIIYKITQDEAYHGSAVGLTAQYDYNLLTEEEKKQADKE----TYELLDILYTNE 168

Query: 57  IAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKK 115
           +AY H       + L+      Y+Q+  NR    +G E  F     NP   +    ++ +
Sbjct: 169 VAYTHSLY--DPLELS-EDVINYVQYNFNRALQNLGREDYFNPEPYNPI--VENQTNVDR 223

Query: 116 EKN--FFETRVTEYQQGAGLKW 135
            +N  FF  +  +Y++   +K 
Sbjct: 224 LRNVDFFSGK-ADYEKSTNIKD 244


>gi|47200896|emb|CAF87761.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 441

 Score = 41.1 bits (96), Expect = 0.048,   Method: Composition-based stats.
 Identities = 6/23 (26%), Positives = 15/23 (65%)

Query: 63  TMPKGFVGLNAPSCEQYMQFIAN 85
            +P   +G+N    ++Y++F+A+
Sbjct: 419 ALPVKLIGMNCQLMKRYIEFVAD 441


>gi|144575330|gb|AAZ53597.2| ribonucleoside-diphosphate reductase beta chain [Mycoplasma
           hyopneumoniae 7448]
          Length = 314

 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 54/133 (40%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   +       E ++ +  +L++   LE  Y 
Sbjct: 173 LPNTSDIIRLILRDKVIHNYYSGYKFQKKVEKLSPEKQDEIKKFTFDLLYKLIELEKDYL 232

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
           ++   +  VGL A S  ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 233 YDLYSE--VGL-AESAIKFSIYNAGKFLQNLGYDSPFSKEETEIEPEIFSQLSARADENH 289

Query: 119 -FFETRVTEYQQG 130
            FF    + Y   
Sbjct: 290 DFFSGNGSSYVMA 302


>gi|71893573|ref|YP_279019.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           hyopneumoniae J]
 gi|72080562|ref|YP_287620.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           hyopneumoniae 7448]
          Length = 339

 Score = 41.1 bits (96), Expect = 0.049,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 54/133 (40%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   +       E ++ +  +L++   LE  Y 
Sbjct: 198 LPNTSDIIRLILRDKVIHNYYSGYKFQKKVEKLSPEKQDEIKKFTFDLLYKLIELEKDYL 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
           ++   +  VGL A S  ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 258 YDLYSE--VGL-AESAIKFSIYNAGKFLQNLGYDSPFSKEETEIEPEIFSQLSARADENH 314

Query: 119 -FFETRVTEYQQG 130
            FF    + Y   
Sbjct: 315 DFFSGNGSSYVMA 327


>gi|144227519|gb|AAZ44308.2| ribonucleoside-diphosphate reductase beta chain [Mycoplasma
           hyopneumoniae J]
          Length = 353

 Score = 41.1 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 54/133 (40%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   +       E ++ +  +L++   LE  Y 
Sbjct: 212 LPNTSDIIRLILRDKVIHNYYSGYKFQKKVEKLSPEKQDEIKKFTFDLLYKLIELEKDYL 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
           ++   +  VGL A S  ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 272 YDLYSE--VGL-AESAIKFSIYNAGKFLQNLGYDSPFSKEETEIEPEIFSQLSARADENH 328

Query: 119 -FFETRVTEYQQG 130
            FF    + Y   
Sbjct: 329 DFFSGNGSSYVMA 341


>gi|284167352|ref|YP_003405630.1| ribonucleotide reductase [Haloterrigena turkmenica DSM 5511]
 gi|284017007|gb|ADB62957.1| ribonucleotide reductase [Haloterrigena turkmenica DSM 5511]
          Length = 296

 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 6/95 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+   ++Y+ RDE  H++FG+  + ++  +     T          + E   L     
Sbjct: 204 LPGLVNGFRYLRRDEGRHVSFGVTKVRKLVDKGVDPET------IVETIDELVPLVETTI 257

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEP 95
            + +  G +G +       +    +RR  Q+G+ P
Sbjct: 258 DQMVRDGSIGADRNGILNRIDTARDRRLEQVGVVP 292


>gi|260904664|ref|ZP_05912986.1| ribonucleoside-diphosphate reductase beta chain [Brevibacterium
           linens BL2]
          Length = 341

 Score = 41.1 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +          +E ++ +  +L +   LE+AY+ E 
Sbjct: 203 TADMIRLILRDKAVHGYYSGYKYQRGIENQTSARQEEMREFTYELLEDLYELELAYSGEL 262

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 103
                +GL       ++++ AN+    +G    F   E   NP
Sbjct: 263 YE--PLGL-MDDVAVFVRYNANKALMNLGYPARFNSDETQVNP 302


>gi|289810170|ref|ZP_06540799.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 215

 Score = 41.1 bits (96), Expect = 0.056,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 54/146 (36%), Gaps = 30/146 (20%)

Query: 4   IAEQYQYIMRDESLHLNF-------GIDVINQIKIENPHLWTKEFQQKSRT---MLHEAT 53
            A+  + I+RDE++H  +        +  ++ I+ E   L+  +   +         EA 
Sbjct: 77  TADLIRLIIRDEAVHGYYIGYKHQIALQKLSAIEREELKLFALDLLMELYDNEICYTEAL 136

Query: 54  LLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEV 110
             E  + ++              + ++ + AN+    +G E LF       NP   +   
Sbjct: 137 YAETGWVND-------------VKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAA 181

Query: 111 IDLKKEKN--FFETRVTEYQQGAGLK 134
           +    ++N  FF    + Y  G  ++
Sbjct: 182 LSPNADENHDFFSGSGSSYVMGKTVE 207


>gi|213612975|ref|ZP_03370801.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 205

 Score = 40.8 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 54/146 (36%), Gaps = 30/146 (20%)

Query: 4   IAEQYQYIMRDESLHLNF-------GIDVINQIKIENPHLWTKEFQQKSRT---MLHEAT 53
            A+  + I+RDE++H  +        +  ++ I+ E   L+  +   +         EA 
Sbjct: 67  TADLIRLIIRDEAVHGYYIGYKHQIALQKLSAIEREELKLFALDLLMELYDNEICYTEAL 126

Query: 54  LLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEV 110
             E  + ++              + ++ + AN+    +G E LF       NP   +   
Sbjct: 127 YAETGWVND-------------VKAFLCYNANKALMNLGYEALFPPEMADVNPA--ILAA 171

Query: 111 IDLKKEKN--FFETRVTEYQQGAGLK 134
           +    ++N  FF    + Y  G  ++
Sbjct: 172 LSPNADENHDFFSGSGSSYVMGKTVE 197


>gi|312601198|gb|ADQ90453.1| Ribonucleoside-diphosphate reductase beta chain [Mycoplasma
           hyopneumoniae 168]
          Length = 223

 Score = 40.8 bits (95), Expect = 0.072,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 54/133 (40%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   +       E ++ +  +L++   LE  Y 
Sbjct: 82  LPNTSDIIRLILRDKVIHNYYSGYKFQKKVEKLSPEKQDEIKKFTFDLLYKLIELEKDYL 141

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
           ++   +  VGL A S  ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 142 YDLYSE--VGL-AESAIKFSIYNAGKFLQNLGYDSPFSKEETEIEPEIFSQLSARADENH 198

Query: 119 -FFETRVTEYQQG 130
            FF    + Y   
Sbjct: 199 DFFSGNGSSYVMA 211


>gi|255325476|ref|ZP_05366578.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           tuberculostearicum SK141]
 gi|255297414|gb|EET76729.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           tuberculostearicum SK141]
          Length = 362

 Score = 40.4 bits (94), Expect = 0.073,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 13/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +       L  KE    + ++L E   LE+ Y+ E 
Sbjct: 224 TADMIRLILRDKAVHGYYSGYKYQRGLESTTPLRQKEMHDFTISLLEELYALELDYSGEL 283

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NF 119
                +GL       ++++ AN+    +G    F   E   NP   ++ +     E  +F
Sbjct: 284 YE--PLGL-MDDVAVFVRYNANKALMNLGYPDYFPPEETEVNP-EILAALAPGADENHDF 339

Query: 120 FETRVTEYQQGAGLK-----WD 136
           F    + Y  G   +     WD
Sbjct: 340 FSGSGSSYVIGTAEETSDDDWD 361


>gi|66391280|ref|YP_238601.1| ORF025 [Staphylococcus phage Twort]
 gi|62637210|gb|AAX92321.1| ORF025 [Staphylococcus phage Twort]
          Length = 349

 Score = 40.4 bits (94), Expect = 0.085,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 17/137 (12%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           MV        I +DE+ H   G+ V    +++   L T+E Q K+  +++E  LLE+ Y 
Sbjct: 198 MVQSGTTIYKITQDEAYH---GVGVGYTAQLDYQEL-TEEEQSKADALMYE--LLEVLYE 251

Query: 61  HET----MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE-NPFPWMSEVIDLKK 115
           +E     M    +GL      +Y+Q+  NR    +G +  F     NP   ++   ++ K
Sbjct: 252 NEVSYSHMLYDKLGLT-EDVIRYVQYNFNRALANLGFDDYFNPEPFNPI--VNNQTNVDK 308

Query: 116 EKN--FFETRVTEYQQG 130
             N  FF T+  +Y++ 
Sbjct: 309 LSNADFFSTKN-DYKRS 324


>gi|311741268|ref|ZP_07715092.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311303438|gb|EFQ79517.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 341

 Score = 40.4 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 13/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +       L  KE    + ++L E   LE+ Y+ E 
Sbjct: 203 TADMIRLILRDKAVHGYYSGYKYQRGLESTTPLRQKEMHDFTISLLEELYALELDYSGEL 262

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NF 119
                +GL       ++++ AN+    +G    F   E   NP   ++ +     E  +F
Sbjct: 263 YE--PLGL-MDDVAVFVRYNANKALMNLGYPDYFPPEETEVNP-EILAALAPGADENHDF 318

Query: 120 FETRVTEYQQGAGLK-----WD 136
           F    + Y  G   +     WD
Sbjct: 319 FSGSGSSYVIGTAEETSDDDWD 340


>gi|227833718|ref|YP_002835425.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454734|gb|ACP33487.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 341

 Score = 40.4 bits (94), Expect = 0.090,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 13/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +       L  KE    + ++L E   LE+ Y+ E 
Sbjct: 203 TADMIRLILRDKAVHGYYSGYKYQRGLESTTPLRQKEMHDFTISLLEELYALELDYSGEL 262

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NF 119
                +GL       ++++ AN+    +G    F   E   NP   ++ +     E  +F
Sbjct: 263 YE--PLGL-MDDVAVFVRYNANKALMNLGYPDYFPPEETEVNP-EILAALAPGADENHDF 318

Query: 120 FETRVTEYQQGAGLK-----WD 136
           F    + Y  G   +     WD
Sbjct: 319 FSGSGSSYVIGTAEETSDDDWD 340


>gi|156086328|ref|XP_001610573.1| ribonucleoside-diphosphate reductase beta subunit [Babesia bovis
           T2Bo]
 gi|154797826|gb|EDO07005.1| ribonucleoside-diphosphate reductase beta subunit, putative
           [Babesia bovis]
          Length = 329

 Score = 40.4 bits (94), Expect = 0.090,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 7/76 (9%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           + +D S+HL F +  +  +K+       +  ++    +L+ A  LE+AY    +P   +G
Sbjct: 204 VAKDVSIHLKFAMAALEHLKL-------RPTRETVMELLNSAYDLEMAYCRSVLPMDHMG 256

Query: 71  LNAPSCEQYMQFIANR 86
           L+     QY++   N+
Sbjct: 257 LSEYHLSQYIKNNVNQ 272


>gi|294155961|ref|YP_003560345.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           crocodyli MP145]
 gi|291600208|gb|ADE19704.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           crocodyli MP145]
          Length = 340

 Score = 40.0 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 47/133 (35%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   +       E ++    +L+     E  + 
Sbjct: 199 LPNTSDIIRLILRDKVIHNYYSGYKYQKKVAKLSDKRKAELKEFVFELLYRLIDAEKKFL 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            +      +   A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 259 TKLYEGFDL---AEDAIRFSVYNAGKFLQNLGYDSPFTDEETRIEPEIFAQLSARADENH 315

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 316 DFFSGNGSSYVMG 328


>gi|67592960|ref|XP_665685.1| ribonucleotide reductase small subunit [Cryptosporidium hominis
           TU502]
 gi|54656484|gb|EAL35456.1| ribonucleotide reductase small subunit [Cryptosporidium hominis]
          Length = 369

 Score = 40.0 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 8/94 (8%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE   + F    I +       + TK    +   +L +A +LE  +    +    + 
Sbjct: 237 IRRDEQYQVEF-CLSIAE------SMKTKPSNDQVVNLLEQAIMLEKNFIFSIVDPQVLQ 289

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 104
           +       ++ F A+     +     F  + NPF
Sbjct: 290 IEREDIVAFLLFNADEILVDLKYPRQFNVS-NPF 322


>gi|262184725|ref|ZP_06044146.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 306

 Score = 39.6 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 13/142 (9%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +       L  KE    + ++L E   LE+ Y+ E 
Sbjct: 168 TADMIRLILRDKAVHGYYSGYKYQRGLESTTPLRQKEMHDFTISLLEELYALELDYSGEL 227

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NPFPWMSEVIDLKKEK-NF 119
                +GL       ++++ AN+    +G    F   E   NP   ++ +     E  +F
Sbjct: 228 YE--PLGL-MDDVAVFVRYNANKALMNLGYPDYFPPEETEVNP-EILAALAPGADENHDF 283

Query: 120 FETRVTEYQQGAGLK-----WD 136
           F    + Y  G   +     WD
Sbjct: 284 FSGSGSSYVIGTAEETSDDDWD 305


>gi|238618784|ref|YP_002913609.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           islandicus M.16.4]
 gi|238379853|gb|ACR40941.1| ribonucleotide reductase [Sulfolobus islandicus M.16.4]
          Length = 308

 Score = 39.6 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 6/98 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+A+    I  DES H+ FGI +I ++  E      K        +   A  +   ++
Sbjct: 196 LPGLAKMVNLIATDESRHIAFGIYLITRLVKEYGEGVYKAAMDHINYLAPYAIGI---FS 252

Query: 61  HETMPKGF---VGLNAPSCEQYMQFIANRRCHQIGLEP 95
             TMP+       L       Y + + N R   I    
Sbjct: 253 EPTMPQVESLPFNLTNIELVDYAKKLLNTRIDAINRAK 290


>gi|172039808|ref|YP_001799522.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           urealyticum DSM 7109]
 gi|171851112|emb|CAQ04088.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           urealyticum DSM 7109]
          Length = 334

 Score = 39.6 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 4/98 (4%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +    +P     E    +  +L E   LE+ Y+ E 
Sbjct: 197 TADMIRLILRDKAVHGYYSGYKFQRGIERHPE-RAAELSDFTHELLEELYQLELEYSTEL 255

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE 101
                 GL     E+++++ AN+    +G  P++  +E
Sbjct: 256 YE--PFGL-MADVERFVKYNANKALMNLGYTPIYPGSE 290


>gi|227826697|ref|YP_002828476.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           islandicus M.14.25]
 gi|229583861|ref|YP_002842362.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           islandicus M.16.27]
 gi|227458492|gb|ACP37178.1| ribonucleotide reductase [Sulfolobus islandicus M.14.25]
 gi|228018910|gb|ACP54317.1| ribonucleotide reductase [Sulfolobus islandicus M.16.27]
          Length = 308

 Score = 39.6 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 6/98 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+A+    I  DES H+ FGI +I ++  E      K        +   A  +   ++
Sbjct: 196 LPGLAKMVNLIATDESRHIAFGIYLITRLVKEYGEGVYKAAMDHINYLAPYAIGI---FS 252

Query: 61  HETMPKGF---VGLNAPSCEQYMQFIANRRCHQIGLEP 95
             TMP+       L       Y + + N R   I    
Sbjct: 253 EPTMPQVESLPFNLTNIELVDYAKKLLNTRIDAINRAK 290


>gi|54020059|ref|YP_115670.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           hyopneumoniae 232]
 gi|53987232|gb|AAV27433.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma
           hyopneumoniae 232]
          Length = 353

 Score = 39.6 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 54/133 (40%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   +       E ++ +  +L++   LE  Y 
Sbjct: 212 LPNTSDVIRLILRDKVIHNYYSGYKFQKKVEKLSPEKQDEIKKFTFDLLYKLIELEKDYL 271

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
           ++   +  VGL A S  ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 272 YDLYSE--VGL-AESAIKFSIYNAGKFLQNLGYDSPFSKEETEIEPEIFSQLSARADENH 328

Query: 119 -FFETRVTEYQQG 130
            FF    + Y   
Sbjct: 329 DFFSGNGSSYVMA 341


>gi|240047145|ref|YP_002960533.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           conjunctivae HRC/581]
 gi|239984717|emb|CAT04689.1| Ribonucleoside-diphosphate reductase beta chai [Mycoplasma
           conjunctivae]
          Length = 344

 Score = 39.6 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 51/133 (38%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +   +      +E +     +L++   LE  Y 
Sbjct: 203 LPNTSDIIRLILRDKVIHNYYSGYKYQRKVEKLSPEKQQEMKDFVFDLLYKLIDLEKEYL 262

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
           +E   +  +   A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 263 YELYEEVDL---AEPAIRFSVYNAGKFLQNLGYDSPFSEEETRIEPEIFNQLSARADENH 319

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 320 DFFSGNGSSYVMG 332


>gi|15899238|ref|NP_343843.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           solfataricus P2]
 gi|227829337|ref|YP_002831116.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           islandicus L.S.2.15]
 gi|229578110|ref|YP_002836508.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           islandicus Y.G.57.14]
 gi|229583322|ref|YP_002841721.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           islandicus Y.N.15.51]
 gi|284996696|ref|YP_003418463.1| ribonucleotide reductase [Sulfolobus islandicus L.D.8.5]
 gi|13815800|gb|AAK42633.1| Ribonuleotide reductase small subunit, probable (nrdB) [Sulfolobus
           solfataricus P2]
 gi|227455784|gb|ACP34471.1| ribonucleotide reductase [Sulfolobus islandicus L.S.2.15]
 gi|228008824|gb|ACP44586.1| ribonucleotide reductase [Sulfolobus islandicus Y.G.57.14]
 gi|228014038|gb|ACP49799.1| ribonucleotide reductase [Sulfolobus islandicus Y.N.15.51]
 gi|284444591|gb|ADB86093.1| ribonucleotide reductase [Sulfolobus islandicus L.D.8.5]
          Length = 308

 Score = 39.6 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 6/94 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+A+    I  DES H+ FGI +I ++  E      K        +   A  +   ++
Sbjct: 196 LPGLAKMVNLIATDESRHIAFGIYLITRLVKEYGEGVYKAAMDHINYLAPYAIGI---FS 252

Query: 61  HETMPKGF---VGLNAPSCEQYMQFIANRRCHQI 91
             TMP+       L       Y + + N R   I
Sbjct: 253 EPTMPQVESLPFNLTNIELVDYAKKLLNTRIDAI 286


>gi|303232548|ref|ZP_07319234.1| ribonucleoside-diphosphate reductase, beta subunit [Atopobium
           vaginae PB189-T1-4]
 gi|302481335|gb|EFL44409.1| ribonucleoside-diphosphate reductase, beta subunit [Atopobium
           vaginae PB189-T1-4]
          Length = 351

 Score = 39.6 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 6/135 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      Q             ++    +L+    LE  Y 
Sbjct: 210 LPNTSDMIRLILRDKVIHNYYSGYKYQQKLKRLAADEQAAMKEFVFDLLYHLIDLEKTYL 269

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            E      +   A     +  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 270 RELYDGFDL---ADDAIAFSLYNAGKFLQNLGYDSPFTAQETHIEPEVFAQLSARADENH 326

Query: 119 -FFETRVTEYQQGAG 132
            FF    + Y  G  
Sbjct: 327 DFFSGSGSSYVIGTA 341


>gi|126649263|ref|XP_001388304.1| ribonucleotide reductase small subunit [Cryptosporidium parvum Iowa
           II]
 gi|126117398|gb|EAZ51498.1| ribonucleotide reductase small subunit [Cryptosporidium parvum Iowa
           II]
          Length = 339

 Score = 39.6 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 8/94 (8%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE   + F + +   +K       TK    +   +L +A +LE  +    +    + 
Sbjct: 237 IRRDEQYQVEFCLSIAKSMK-------TKPSNDQVVNLLEQAIMLEKNFIFSIVDPQVLQ 289

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 104
           +       ++ F A+     +     F  + NPF
Sbjct: 290 IEREDIVAFLLFNADEILVDLKYPRQFNVS-NPF 322


>gi|223954268|gb|ACN30264.1| UL40 [Anatid herpesvirus 1]
          Length = 46

 Score = 39.2 bits (91), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 91  IGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGLKW 135
           IGL PLF        +    +   ++ NFFE R T Y  G+ L  
Sbjct: 2   IGLAPLFDEPPPKHDFPLAFMATSQQTNFFERRNTTYA-GSVLND 45


>gi|323508655|dbj|BAJ77221.1| cgd6_700 [Cryptosporidium parvum]
          Length = 285

 Score = 39.2 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 8/94 (8%)

Query: 11  IMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVG 70
           I RDE   + F + +   +K       TK    +   +L +A +LE  +    +    + 
Sbjct: 183 IRRDEQYQVEFCLSIAKSMK-------TKPSNDQVVNLLEQAIMLEKNFIFSIVDPQVLQ 235

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF 104
           +       ++ F A+     +     F  + NPF
Sbjct: 236 IEREDIVAFLLFNADEILVDLKYPRQFNVS-NPF 268


>gi|258510152|ref|YP_003183586.1| ribonucleotide reductase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257476878|gb|ACV57197.1| ribonucleotide reductase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 317

 Score = 38.8 bits (90), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 18/119 (15%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----------SRTMLH 50
           + G+ +  + + RDES H+ +G  +++++  EN H+W    ++            + +  
Sbjct: 192 LPGLIQAIRLLQRDESRHIGYGTYLLSRLISENAHIWDVVNRRINLLLPHAIGVVQDLNA 251

Query: 51  EATLLEIAYAHETMP--KGFVGLNAPSCEQY--MQFIAN----RRCHQIGLEPLFKYTE 101
           E    E     E +       GLN      Y   QF       +R     ++ ++ YTE
Sbjct: 252 ELDTEEAQKLAEELGITDVPFGLNPDEFVAYAQKQFATRLGVLQRARGKSVDEIYYYTE 310


>gi|213419183|ref|ZP_03352249.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 305

 Score = 38.8 bits (90), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 26/113 (23%)

Query: 4   IAEQYQYIMRDESLHLNF-------GIDVINQIKIENPHLWTKEFQQKSRT---MLHEAT 53
            A+  + I+RDE++H  +        +  ++ I+ E   L+  +   +         EA 
Sbjct: 181 TADLIRLIIRDEAVHGYYIGYKHQIALQKLSAIEREELKLFALDLLMELYDNEICYTEAL 240

Query: 54  LLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK---YTENP 103
             E  + ++              + ++ + AN+    +G E LF       NP
Sbjct: 241 YAETGWVND-------------VKAFLCYNANKALMNLGYEALFPPEMADVNP 280


>gi|68535290|ref|YP_249995.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           jeikeium K411]
 gi|68262889|emb|CAI36377.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           jeikeium K411]
          Length = 338

 Score = 38.8 bits (90), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 21/148 (14%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +    +P   + E ++ + T++ E   LE  Y+ + 
Sbjct: 196 TADMIRLILRDKAVHGYYSGYKFQRGLEAHPE-RSAELEEFTFTLVEELLELEKEYSGDL 254

Query: 64  MPKGFVGLNA--PSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVI-----DL 113
             +      +       ++ + A++    +G  P ++       P     E+I     D 
Sbjct: 255 YGETLPDEKSLIDGVMAFVHYNADKALMNLGYPPQYEEEAAKTEP-----EIIAALAPDS 309

Query: 114 KKEKNFFETRVTEYQQGAGLK-----WD 136
            +  +FF    + Y  G         WD
Sbjct: 310 NETHDFFSGSGSSYVIGRAESTEEDDWD 337


>gi|328713560|ref|XP_003245116.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
           [Acyrthosiphon pisum]
          Length = 62

 Score = 38.8 bits (90), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 5/65 (7%)

Query: 68  FVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEY 127
            VG +       ++  A+    + G         +PF    E+   + + NFFE R++++
Sbjct: 1   MVGKSCEKIH--IEDFADGLLKESGFLQFTGRQTHPF---MELTSQQGKTNFFERRLSKH 55

Query: 128 QQGAG 132
           Q  + 
Sbjct: 56  QLSSV 60


>gi|323476430|gb|ADX81668.1| ribonucleotide reductase [Sulfolobus islandicus HVE10/4]
          Length = 308

 Score = 38.8 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 6/98 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+A+    I  DES H+ FGI +I ++  E      K        +   A  +   ++
Sbjct: 196 LPGLAKMVNLIATDESRHIAFGIYLITRLVKEYGEGVYKTAMDHINYLAPYAIGI---FS 252

Query: 61  HETMPKGF---VGLNAPSCEQYMQFIANRRCHQIGLEP 95
             TMP+       L       Y + + N R   I    
Sbjct: 253 EPTMPQVESLPFNLTNIELVDYAKKLLNTRIDAINRAK 290


>gi|323473782|gb|ADX84388.1| ribonucleotide reductase [Sulfolobus islandicus REY15A]
          Length = 308

 Score = 38.8 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 6/98 (6%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G+A+    I  DES H+ FGI +I ++  E      K        +   A  +   ++
Sbjct: 196 LPGLAKMVNLIATDESRHIAFGIYLITRLVKEYGEGVYKTAMDHINYLAPYAIGI---FS 252

Query: 61  HETMPKGF---VGLNAPSCEQYMQFIANRRCHQIGLEP 95
             TMP+       L       Y + + N R   I    
Sbjct: 253 EPTMPQVESLPFNLTNIELVDYAKKLLNTRIDAINRAK 290


>gi|25010526|ref|NP_734921.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae NEM316]
 gi|23094879|emb|CAD46097.1| unknown [Streptococcus agalactiae NEM316]
          Length = 336

 Score = 38.8 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      Q   +       E +     +L++   LE AY 
Sbjct: 195 LPNTSDIIRLILRDKVIHNYYSGYKYQQKVAKLSVEKQAEMKTFVFDLLYQLIDLEKAYL 254

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
           +E      +   A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 255 YELYDGFDL---AEDAIRFSNYNAGKFLQNLGYDSPFTEEETRISPEVFAQLSARADENH 311

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 312 DFFSGNGSSYIMG 324


>gi|312865062|ref|ZP_07725290.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
 gi|311099173|gb|EFQ57389.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
          Length = 318

 Score = 38.4 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA-HE 62
           +    + ++R+ESLH  +    +  +  E      K+F+  +R  + +    E       
Sbjct: 183 LGLMLEMVIRNESLHCYYLGHKVKLLLTEVDQDEAKDFENWARDFVDKLVQQEEDLIEDY 242

Query: 63  TMPKGFVGLNAPSCEQYMQFIANRRCHQIGL-EPLFKYTE 101
            +      L      Q     AN      GL + ++ + +
Sbjct: 243 FLLDDAKSLAKDLLHQ----EANHILENFGLGQSVYPFVQ 278


>gi|260578497|ref|ZP_05846410.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium jeikeium ATCC 43734]
 gi|258603378|gb|EEW16642.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium jeikeium ATCC 43734]
          Length = 338

 Score = 38.4 bits (89), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 21/148 (14%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +    +P   + E ++ +  ++ E   LE  Y+ + 
Sbjct: 196 TADMIRLILRDKAVHGYYSGYKFQRGLEAHPE-RSAELEEFTFALVEELLELEKEYSGDL 254

Query: 64  MPKGFVGLNA--PSCEQYMQFIANRRCHQIGLEPLFK---YTENPFPWMSEVI-----DL 113
                    +       ++ + A++    +G  P ++       P     E+I     D 
Sbjct: 255 YGGTLPDEKSLIDGVMAFVHYNADKALMNLGYPPQYEEEAAKTEP-----EIIAALAPDS 309

Query: 114 KKEKNFFETRVTEYQQGAGLK-----WD 136
            +  +FF    + Y  G         WD
Sbjct: 310 NETHDFFSGSGSSYVIGRAESTEEDDWD 337


>gi|122892861|gb|ABM67449.1| NrdB [Xanthomonas campestris]
 gi|122892863|gb|ABM67450.1| NrdB [Xanthomonas campestris]
 gi|122892865|gb|ABM67451.1| NrdB [Xanthomonas campestris]
 gi|122892867|gb|ABM67452.1| NrdB [Xanthomonas campestris]
 gi|122892869|gb|ABM67453.1| NrdB [Xanthomonas campestris]
 gi|122892871|gb|ABM67454.1| NrdB [Xanthomonas campestris]
 gi|122892873|gb|ABM67455.1| NrdB [Xanthomonas campestris]
 gi|122892875|gb|ABM67456.1| NrdB [Xanthomonas campestris]
 gi|122892877|gb|ABM67457.1| NrdB [Xanthomonas campestris]
 gi|122892879|gb|ABM67458.1| NrdB [Xanthomonas campestris]
 gi|122892881|gb|ABM67459.1| NrdB [Xanthomonas campestris]
 gi|122892883|gb|ABM67460.1| NrdB [Xanthomonas campestris]
 gi|122892885|gb|ABM67461.1| NrdB [Xanthomonas campestris]
 gi|122892887|gb|ABM67462.1| NrdB [Xanthomonas campestris]
 gi|122892889|gb|ABM67463.1| NrdB [Xanthomonas campestris]
 gi|122892891|gb|ABM67464.1| NrdB [Xanthomonas campestris]
 gi|122892893|gb|ABM67465.1| NrdB [Xanthomonas campestris]
 gi|122892895|gb|ABM67466.1| NrdB [Xanthomonas campestris]
 gi|122892897|gb|ABM67467.1| NrdB [Xanthomonas campestris]
 gi|122892899|gb|ABM67468.1| NrdB [Xanthomonas campestris]
 gi|122892901|gb|ABM67469.1| NrdB [Xanthomonas campestris]
 gi|122892903|gb|ABM67470.1| NrdB [Xanthomonas campestris]
 gi|122892905|gb|ABM67471.1| NrdB [Xanthomonas campestris]
 gi|122892907|gb|ABM67472.1| NrdB [Xanthomonas campestris]
 gi|122892909|gb|ABM67473.1| NrdB [Xanthomonas campestris]
 gi|122892911|gb|ABM67474.1| NrdB [Xanthomonas campestris]
 gi|122892913|gb|ABM67475.1| NrdB [Xanthomonas campestris]
 gi|122892915|gb|ABM67476.1| NrdB [Xanthomonas campestris]
 gi|122892917|gb|ABM67477.1| NrdB [Xanthomonas campestris]
 gi|122892919|gb|ABM67478.1| NrdB [Xanthomonas campestris]
 gi|122892921|gb|ABM67479.1| NrdB [Xanthomonas campestris]
 gi|122892923|gb|ABM67480.1| NrdB [Xanthomonas campestris]
 gi|122892925|gb|ABM67481.1| NrdB [Xanthomonas campestris]
 gi|122892927|gb|ABM67482.1| NrdB [Xanthomonas campestris]
 gi|122892929|gb|ABM67483.1| NrdB [Xanthomonas campestris]
 gi|122892931|gb|ABM67484.1| NrdB [Xanthomonas campestris]
 gi|122892933|gb|ABM67485.1| NrdB [Xanthomonas campestris]
 gi|122892935|gb|ABM67486.1| NrdB [Xanthomonas campestris]
 gi|122892937|gb|ABM67487.1| NrdB [Xanthomonas campestris]
          Length = 175

 Score = 38.1 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 10/22 (45%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG 22
           M G  +   +I RDE  H  F 
Sbjct: 152 MTGTGKIISFINRDELAHSKFI 173


>gi|293363858|ref|ZP_06610594.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           alligatoris A21JP2]
 gi|292552348|gb|EFF41122.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           alligatoris A21JP2]
          Length = 340

 Score = 38.1 bits (88), Expect = 0.46,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 46/133 (34%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      +           E +     +L +  + E  + 
Sbjct: 199 LPNTSDIIRLILRDKVIHNYYSGYKYQKKVARLSEARKAEMKTFVFELLDKLIVAEKKFL 258

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
            +      +   A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 259 TKLYEGFDL---ADDAIRFSVYNAGKFLQNLGYDSPFTEEETRIEPEIFAQLSARADENH 315

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 316 DFFSGNGSSYVMG 328


>gi|66957902|gb|AAY59065.1| ribonucleotide reductase small subunit [Tortoise herpesvirus]
          Length = 215

 Score = 37.7 bits (87), Expect = 0.49,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 7   QYQYIMRDESLHLNFGIDVINQIKIENPHLWTKE 40
               I RDE++H      + N    ++  + T E
Sbjct: 180 SNDLISRDEAIHTQASCCIFNNYLKDH-EMPTDE 212


>gi|284174067|ref|ZP_06388036.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           solfataricus 98/2]
 gi|261600997|gb|ACX90600.1| ribonucleotide reductase [Sulfolobus solfataricus 98/2]
          Length = 308

 Score = 37.7 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPH 35
           + G+A+    I  DES H+ FG+ +I ++  E+  
Sbjct: 196 LPGLAKMINLIATDESRHIAFGVYLIARLVKEHGE 230


>gi|34763895|ref|ZP_00144797.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27886329|gb|EAA23602.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 245

 Score = 37.7 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGI 23
           MVG ++  + I RDE  H+    
Sbjct: 208 MVGTSDIIRLINRDELSHVVLFR 230


>gi|306819415|ref|ZP_07453122.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307701705|ref|ZP_07638721.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
 gi|304647707|gb|EFM45025.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307613208|gb|EFN92461.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
          Length = 333

 Score = 37.3 bits (86), Expect = 0.64,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 12/141 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +    +P     E +  +  +L +   LE+ Y+ E 
Sbjct: 196 TADMIRLILRDKAVHGYYSGYKYQRGLDLHPE-RAAEMEDFTFQLLDDLYELELKYSGEI 254

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEK-NFF 120
                 GL       ++++ AN+    +G    F  + TE     ++ +    +E  +FF
Sbjct: 255 YE--PTGL-MDDVAVFVRYNANKAMMNLGYPTRFAPEETEVKADILAALAPGSEETHDFF 311

Query: 121 ETRVTEYQQGAGLK-----WD 136
               + Y  G+        WD
Sbjct: 312 SGSGSSYVIGSAESTSDEDWD 332


>gi|254992907|ref|ZP_05275097.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J2-064]
          Length = 229

 Score = 37.3 bits (86), Expect = 0.65,   Method: Composition-based stats.
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query: 1   MVGIAEQYQYIMRDESLHLNF 21
           M G  +   +I RDE  H  F
Sbjct: 209 MTGTGKIISFINRDELAHSKF 229


>gi|22536601|ref|NP_687452.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae 2603V/R]
 gi|76788476|ref|YP_329136.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae A909]
 gi|76798641|ref|ZP_00780867.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 18RS21]
 gi|77406064|ref|ZP_00783140.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae H36B]
 gi|77407720|ref|ZP_00784475.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae COH1]
 gi|77411308|ref|ZP_00787657.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae CJB111]
 gi|77414130|ref|ZP_00790296.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 515]
 gi|22533438|gb|AAM99324.1|AE014211_1 ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           agalactiae 2603V/R]
 gi|76563533|gb|ABA46117.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           agalactiae A909]
 gi|76586006|gb|EAO62538.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 18RS21]
 gi|77159800|gb|EAO70945.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 515]
 gi|77162644|gb|EAO73606.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae CJB111]
 gi|77173719|gb|EAO76833.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae COH1]
 gi|77175344|gb|EAO78137.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae H36B]
 gi|319744439|gb|EFV96796.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae ATCC 13813]
          Length = 336

 Score = 37.3 bits (86), Expect = 0.65,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 6/133 (4%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +      Q   +       E +     +L++   LE AY 
Sbjct: 195 LPNTSDIIRLILRDKVIHNYYSGYKYQQKVAKLSVEKQAEMKTFVFDLLYQLIDLEKAYL 254

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPF-PWMSEVIDLKKEKN- 118
           +E      +   A    ++  + A +    +G +  F   E    P +   +  + ++N 
Sbjct: 255 YELYDGFDL---AEDAIRFSIYNAGKFLQNLGYDSPFTEEETRISPEVFAQLSARADENH 311

Query: 119 -FFETRVTEYQQG 130
            FF    + Y  G
Sbjct: 312 DFFSGNGSSYIMG 324


>gi|269976951|ref|ZP_06183925.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
 gi|269934782|gb|EEZ91342.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
          Length = 333

 Score = 37.3 bits (86), Expect = 0.66,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 12/141 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +    +P     E +  +  +L +   LE+ Y+ E 
Sbjct: 196 TADMIRLILRDKAVHGYYSGYKYQRGLDLHPERV-AEMEDFTFQLLDDLYELELKYSGEI 254

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEK-NFF 120
                 GL       ++++ AN+    +G    F  + TE     ++ +    +E  +FF
Sbjct: 255 YE--PTGL-MDDVAVFVRYNANKAMMNLGYPTRFAPEETEVKADILAALAPGSEETHDFF 311

Query: 121 ETRVTEYQQGAGLK-----WD 136
               + Y  G+        WD
Sbjct: 312 SGSGSSYVIGSAESTSDEDWD 332


>gi|227876139|ref|ZP_03994257.1| ribonucleoside-diphosphate reductase [Mobiluncus mulieris ATCC
           35243]
 gi|227843295|gb|EEJ53486.1| ribonucleoside-diphosphate reductase [Mobiluncus mulieris ATCC
           35243]
          Length = 333

 Score = 37.3 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 12/141 (8%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +    +P     E +  +  +L +   LE+ Y+ E 
Sbjct: 196 TADMIRLILRDKAVHGYYSGYKYQRGLDLHPE-RAAEMEDFTFQLLDDLYELELKYSGEI 254

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF--KYTENPFPWMSEVIDLKKEK-NFF 120
                 GL       ++++ AN+    +G    F  + TE     ++ +    +E  +FF
Sbjct: 255 YE--PTGL-MDDVAVFVRYNANKAMMNLGYPTRFAPEETEVKADILAALAPGSEETHDFF 311

Query: 121 ETRVTEYQQGAGLK-----WD 136
               + Y  G+        WD
Sbjct: 312 SGSGSSYVIGSAESTSDEDWD 332


>gi|32709427|gb|AAP86732.1| NrdB [Enterobacteria phage RB3]
          Length = 258

 Score = 36.9 bits (85), Expect = 0.97,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 1   MVGIAEQYQYIMRDESLHLNFG 22
           M G A+  ++I RDE LHL   
Sbjct: 237 MEGNAKIMKFIARDEQLHLKGT 258


>gi|171779438|ref|ZP_02920402.1| hypothetical protein STRINF_01283 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282055|gb|EDT47486.1| hypothetical protein STRINF_01283 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 317

 Score = 36.5 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 3/102 (2%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +    + I+R+ESLH  +    I  +  E+     + F+      ++    L I    + 
Sbjct: 183 LGSMLEMIIRNESLHCFYFSHKIKLLLKESDLQEVERFKAWGYETVNHFVKLGINLIGDF 242

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFP 105
                  + A +        AN     IGL+  F +      
Sbjct: 243 YYLKESKIIAKNLILQE---ANNILMGIGLKEQFNFNAEVLK 281


>gi|162450799|ref|YP_001613166.1| Acyl-[acyl-carrier protein] desaturase [Sorangium cellulosum 'So ce
           56']
 gi|161161381|emb|CAN92686.1| Probable Acyl-[acyl-carrier protein] desaturase [Sorangium
           cellulosum 'So ce 56']
          Length = 291

 Score = 36.5 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 6   EQYQYIMRDESLHLNFGIDVINQIKIEN 33
             Y YI RDE  H  F   VI  +  E+
Sbjct: 162 TIYDYIARDEIAHCRFYQSVIKVLLEED 189


>gi|218291056|ref|ZP_03495088.1| ribonucleotide reductase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239010|gb|EED06216.1| ribonucleotide reductase [Alicyclobacillus acidocaldarius LAA1]
          Length = 317

 Score = 36.5 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 18/119 (15%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQK----------SRTMLH 50
           + G+ +  + + RDES H+ +G  +++++  EN ++W    ++            + +  
Sbjct: 192 LPGLIQAIRLLQRDESRHIGYGTYLLSRLISENEYIWDVVNRRTNLLLPHAIGVVQDLNA 251

Query: 51  EATLLEIAYAHETMP--KGFVGLNAPSCEQY--MQFIAN----RRCHQIGLEPLFKYTE 101
           E    E     E +       GLN      Y   QF       +R     ++ ++ YTE
Sbjct: 252 ELDTEEAQKLAEELGITDVPFGLNPDEFVAYAQKQFATRLGVLQRARGKSVDEIYYYTE 310


>gi|148656105|ref|YP_001276310.1| ribonucleotide-diphosphate reductase subunit beta [Roseiflexus sp.
           RS-1]
 gi|148568215|gb|ABQ90360.1| ribonucleotide reductase [Roseiflexus sp. RS-1]
          Length = 297

 Score = 36.1 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 41/91 (45%), Gaps = 2/91 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +    + +DES H+ +G+ +++++    P LW    ++ +  +++   +++ A+A
Sbjct: 187 MPGTRKGIGLLKQDESRHIAYGVYLLSRLINAEPRLWDVIVERMNELVVYAMGVIDDAFA 246

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQI 91
                    GL+      +      RR  +I
Sbjct: 247 CY--EVVPFGLSHDDFMHFAMGQFQRRLDRI 275


>gi|146322251|ref|YP_001174720.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis]
 gi|145968742|gb|ABQ00020.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis]
          Length = 317

 Score = 36.1 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 37/113 (32%), Gaps = 25/113 (22%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +    + I+R+ESLH  +    +  +  E+     + F+  S   ++    L        
Sbjct: 183 LGTMLEMIIRNESLHCFYFSHKVKLLLKESDPKEVERFKAWSYETVNHFVKL-------- 234

Query: 64  MPKGFVGLNAPSCEQYMQFI-----------ANRRCHQIGLEPLFKYTENPFP 105
                 GLN      Y++             AN     IGL+  F + +    
Sbjct: 235 ------GLNIIDDFYYLKESKKIAKNLILQEANNILMGIGLKEQFGFNDEVLK 281


>gi|254993837|ref|ZP_05276027.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J2-064]
          Length = 48

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 98  KYTENPFPWMSEVID--LKKEKNFFETRVTEYQQ 129
            +++N   W+    D   + + +FFE R + Y++
Sbjct: 5   GHSDNTMTWIKAYADNFTETKTDFFEMRNSSYKK 38


>gi|320450740|ref|YP_004202836.1| ribonucleoside-diphosphate reductase subunit beta [Thermus
           scotoductus SA-01]
 gi|320150909|gb|ADW22287.1| ribonucleoside-diphosphate reductase, subunit beta [Thermus
           scotoductus SA-01]
          Length = 299

 Score = 36.1 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 6/83 (7%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           + G  E  ++I RDES H+ +GI +I +    NP L+    +++  T+L  A  +     
Sbjct: 188 LPGTLEGIRHIQRDESRHIAYGIYLIARHVAANPELF-PVVERRMSTLLPYALGV----V 242

Query: 61  HETMPKGFVGLNAPS-CEQYMQF 82
            +       G        +++Q+
Sbjct: 243 QDIFQAYPEGFPLKLDMNEFIQY 265


>gi|329575047|gb|EGG56599.1| hypothetical protein HMPREF9520_01787 [Enterococcus faecalis
           TX1467]
          Length = 116

 Score = 36.1 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 7/85 (8%)

Query: 39  KEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFK 98
            + +     +L+E    E  Y  E      +G      + ++++ AN+    +G++PLF 
Sbjct: 9   DKLKDWMYNLLYELYENEERYTEELYDD--LGWT-EEVKTFLRYNANKALMNLGMDPLFA 65

Query: 99  YTE---NPFPWMSEVIDLKKEKNFF 120
            T    NP   M+ +       +FF
Sbjct: 66  DTANDVNPIV-MNGISTGTSNHDFF 89


>gi|70607897|ref|YP_256767.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           acidocaldarius DSM 639]
 gi|68568545|gb|AAY81474.1| ribonucleoside-diphosphate reductase [Sulfolobus acidocaldarius DSM
           639]
          Length = 314

 Score = 35.7 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPH 35
           M G+++    I  DES H+ +G  +I ++ +EN  
Sbjct: 200 MPGLSKTVNLIATDESRHIAYGTYLITRLIVENGE 234


>gi|328700623|ref|XP_003241331.1| PREDICTED: hypothetical protein LOC100573065 [Acyrthosiphon pisum]
          Length = 50

 Score = 35.7 bits (82), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 114 KKEKNFFETRVTEYQQGAG 132
           + E NFFE RV  YQ+ + 
Sbjct: 14  RGETNFFEKRVCYYQKASV 32


>gi|293556438|ref|ZP_06675016.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
 gi|291601402|gb|EFF31676.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
          Length = 317

 Score = 35.7 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 11/102 (10%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
           +      I+R+ESLH  +    I  +  E      KEF+     ++     L I   ++ 
Sbjct: 183 LGSMLGMIVRNESLHCYYLNHKIRLLLRETKLEQVKEFKNWGVYIVDYFVELAIRLINDF 242

Query: 64  MPKGFVGLNAPSCEQY----MQFIANRRCHQIGLEPLFKYTE 101
                   N  + +      ++  AN     IGL   ++  E
Sbjct: 243 -------YNLENSKTVAINLVKQEANHILTGIGLNKAYQIDE 277


>gi|295695705|ref|YP_003588943.1| ribonucleotide reductase [Bacillus tusciae DSM 2912]
 gi|295411307|gb|ADG05799.1| ribonucleotide reductase [Bacillus tusciae DSM 2912]
          Length = 296

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 7/81 (8%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G+ +  +Y+ RDES H+ +G  +++++  EN ++W K    K   +L  A  +     
Sbjct: 186 MPGLLKAVEYLKRDESRHIGYGTYLLSRLIAENENVW-KTINNKMGELLPYAIGV----V 240

Query: 61  HETMPKGFV--GLNAPSCEQY 79
           +E + +G    GL+     QY
Sbjct: 241 NELLGEGPHPFGLDPEEFVQY 261


>gi|326803224|ref|YP_004321042.1| ribonucleoside-diphosphate reductase, beta subunit [Aerococcus
           urinae ACS-120-V-Col10a]
 gi|326650868|gb|AEA01051.1| ribonucleoside-diphosphate reductase, beta subunit [Aerococcus
           urinae ACS-120-V-Col10a]
          Length = 337

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 15/146 (10%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   ++  + I+RD+ +H  +          +       E +Q    +L +   LE  Y 
Sbjct: 196 LPNTSDIIRLILRDKVIHNFYSGYKYQLKVAKLSPEKQAEMKQFVFDLLDKMIGLEKTYL 255

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLF-----KYTENPFPWMSEVIDLKK 115
           H+       GL A    ++  + A +    +G E  F     +     F  +S   D   
Sbjct: 256 HQLY--DGFGL-ADEAIRFSLYNAGKFLQNLGYESPFTKEETRIAPEVFAQLSARADENH 312

Query: 116 EKNFFETRVTEYQQGAGLK-----WD 136
             +FF    + Y  G   +     WD
Sbjct: 313 --DFFSGSGSSYIIGTSEETLDEDWD 336


>gi|260174332|ref|ZP_05760744.1| hypothetical protein BacD2_20921 [Bacteroides sp. D2]
          Length = 153

 Score = 35.7 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 48  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIA-NRRCHQIGLEPLFKYTE 101
           +  E   ++  +     P    G +      Y +F+A NRR  +IG+E  ++  +
Sbjct: 97  VCSEEKQVDYCFQCSHFPCENTGFDEHL---YKRFVAINRRMQEIGIEKYYEEVK 148


>gi|315922600|ref|ZP_07918840.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696475|gb|EFS33310.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 150

 Score = 35.4 bits (81), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 48  MLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIA-NRRCHQIGLEPLFKYTE 101
           +  E   ++  +     P    G +      Y +F+A NRR  +IG+E  ++  +
Sbjct: 94  VCSEEKQVDYCFQCSHFPCENTGFDEHL---YKRFVAINRRMQEIGIEKYYEEVK 145


>gi|20804010|emb|CAD31587.1| PUTATIVE METHYLASPARTATE AMMONIA-LYASE PROTEIN [Mesorhizobium loti
           R7A]
          Length = 423

 Score = 35.4 bits (81), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 22/86 (25%)

Query: 45  SRTMLHEATLLEIAYAHETMPKGFV------GLNAPSCEQYMQFIANRRCHQIGLEPLFK 98
              M+ +A         + +P G +      G+N  +  ++++++A RR  +IG      
Sbjct: 186 VDKMILKAV--------DVLPHGLINSRQKFGINGQTFMEFVKWVA-RRTREIGCPGYHP 236

Query: 99  YTENPFP---WMSEVIDL--KKEKNF 119
                F    W+ + I L  +   +F
Sbjct: 237 VLH--FDVYGWIGQEIGLEPQNIADF 260


>gi|156743708|ref|YP_001433837.1| ribonucleotide-diphosphate reductase subunit beta [Roseiflexus
           castenholzii DSM 13941]
 gi|156235036|gb|ABU59819.1| ribonucleotide reductase [Roseiflexus castenholzii DSM 13941]
          Length = 295

 Score = 35.4 bits (81), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 42/91 (46%), Gaps = 2/91 (2%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           M G  +    + +DES H+ +G+ +++++    P LW    ++ +  +++   +++ A+A
Sbjct: 188 MPGTRKGIGLLKQDESRHIAYGVYLLSRLINAEPRLWDVVVERMNELVVYAMGVIDDAFA 247

Query: 61  HETMPKGFVGLNAPSCEQYMQFIANRRCHQI 91
                    GL+     Q+      RR  +I
Sbjct: 248 CY--EVVPFGLSHDDFMQFAMGQFERRLDRI 276


>gi|308178758|ref|YP_003918164.1| ribonucleoside-diphosphate reductase subunit beta [Arthrobacter
           arilaitensis Re117]
 gi|307746221|emb|CBT77193.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter
           arilaitensis Re117]
          Length = 341

 Score = 35.4 bits (81), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 6/103 (5%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHET 63
            A+  + I+RD+++H  +      +          +  ++ +  +L E   LE+ Y+ E 
Sbjct: 203 TADMIRLILRDKAVHGYYSGYKYQRGLETQSPATQENMREFTYALLEELYELELQYSGEL 262

Query: 64  MPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPLFKYTE---NP 103
                +GL       ++++ AN+    +G    F   E   NP
Sbjct: 263 YE--PLGL-MDDVAVFVRYNANKALMNLGYPARFTPEETNVNP 302


>gi|256844583|ref|ZP_05550068.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus 125-2-CHN]
 gi|256613124|gb|EEU18328.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus 125-2-CHN]
          Length = 276

 Score = 35.4 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +          +       E ++     L +   LE  Y 
Sbjct: 200 LPNTADIIRLILRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYL 259

Query: 61  HET 63
           HE 
Sbjct: 260 HEL 262


>gi|256843983|ref|ZP_05549470.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus 125-2-CHN]
 gi|256613888|gb|EEU19090.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus 125-2-CHN]
          Length = 287

 Score = 35.4 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%)

Query: 1   MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYA 60
           +   A+  + I+RD+ +H  +          +       E ++     L +   LE  Y 
Sbjct: 211 LPNTADIIRLILRDKVIHNYYSGYKYQLAVKKLAPAKQAEMKKFVFDFLDKLIDLEKKYL 270

Query: 61  HET 63
           HE 
Sbjct: 271 HEL 273


>gi|145552288|ref|XP_001461820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124429656|emb|CAK94447.1| unnamed protein product [Paramecium tetraurelia]
          Length = 479

 Score = 35.4 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 7/80 (8%)

Query: 8   YQYIMRDESLHLN-FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK 66
             +I  DE++HLN    ++I+ + I+     +K  ++K+ +M  E T     ++ + +P+
Sbjct: 355 IGWIYNDENIHLNILSTNLISGVCIDR----SKNLEKKNYSMFQEKTTFTYKFSAKHIPE 410

Query: 67  GFVGLNAPSCEQYMQFIANR 86
                +    +  ++FI+NR
Sbjct: 411 APP--SQSFMQHQIEFISNR 428


>gi|301111656|ref|XP_002904907.1| FtsJ methyltransferase domain-containing protein, putative
           [Phytophthora infestans T30-4]
 gi|262095237|gb|EEY53289.1| FtsJ methyltransferase domain-containing protein, putative
           [Phytophthora infestans T30-4]
          Length = 348

 Score = 35.4 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 6/55 (10%)

Query: 69  VGLNAPSCEQYMQFIANRRCHQIGLEP-LFKYTENPFPWMSEVIDLKKEKNFFET 122
           +G N    E+   ++AN    ++ LE   F   E+     S+    +   N FE 
Sbjct: 42  LGKNCKEVEKQQNYVANSLLQELQLEKNKFNELES-----SQFFSARAATNAFEK 91


>gi|197106670|ref|YP_002132047.1| predicted transcriptional regulator [Phenylobacterium zucineum
           HLK1]
 gi|196480090|gb|ACG79618.1| predicted transcriptional regulator [Phenylobacterium zucineum
           HLK1]
          Length = 479

 Score = 35.4 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 14/82 (17%)

Query: 47  TMLHE--ATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGL--EPLFKYTEN 102
            M  +      E+A   ++ P    G++      Y  ++  RR  ++G    P     EN
Sbjct: 89  QMFRDLGVARHEVAEVADSAP----GVSEAIVRLYRAYLDQRRLSELGQVGRPEEGAFEN 144

Query: 103 ----PFPWMSEVIDLKKEKNFF 120
               P  W+ + I  + +KN+F
Sbjct: 145 SVVTPSDWVRDYI--QAQKNYF 164


>gi|260793066|ref|XP_002591534.1| hypothetical protein BRAFLDRAFT_60457 [Branchiostoma floridae]
 gi|229276741|gb|EEN47545.1| hypothetical protein BRAFLDRAFT_60457 [Branchiostoma floridae]
          Length = 659

 Score = 35.0 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 14/86 (16%)

Query: 6   EQYQYIMRDESL-HLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETM 64
              +Y    ESL HL FG  +      EN      E ++    +L  +  L + +A    
Sbjct: 57  FSMEYFS--ESLAHLWFGCLLGMMAFTENESFRYDEKEEVMNILLMTSVGLSLFWAM--- 111

Query: 65  PKGFVGLNAPSCEQYMQFIANRRCHQ 90
                         Y+++ +N   + 
Sbjct: 112 --------VERTCNYIKYTSNLLTNS 129


>gi|297161055|gb|ADI10767.1| acyl-(acyl-carrier-protein) desaturase [Streptomyces
           bingchenggensis BCW-1]
          Length = 272

 Score = 35.0 bits (80), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 26/75 (34%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAH 61
             +AE  +YI RDE+ H +F    +     E+     K+     +     A  L   Y  
Sbjct: 160 PVMAEVCRYIARDEAAHADFYRRTLQACLQEDYEGTLKDIAHVVKEFKMPAYDLLPDYDK 219

Query: 62  ETMPKGFVGLNAPSC 76
                  +G++    
Sbjct: 220 RLAVMQVIGIDREVF 234


>gi|254477923|ref|ZP_05091308.1| oligopeptide/dipeptide ABC transporter, permease protein
          [Ruegeria sp. R11]
 gi|214028508|gb|EEB69344.1| oligopeptide/dipeptide ABC transporter, permease protein
          [Ruegeria sp. R11]
          Length = 326

 Score = 35.0 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 11/78 (14%)

Query: 21 FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM 80
          F I +I     +N        ++     + E    ++        +  +GLN     QY+
Sbjct: 17 FAISLIGFAIQDN---LGDPLRELVGQSVSEEVRQQL--------RDELGLNDSFMTQYI 65

Query: 81 QFIANRRCHQIGLEPLFK 98
          +F+ N     +G    FK
Sbjct: 66 RFLGNVLQGDLGTSYFFK 83


>gi|293570202|ref|ZP_06681272.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
 gi|291609715|gb|EFF38975.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
          Length = 317

 Score = 34.6 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 22/52 (42%)

Query: 4   IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL 55
           +    + I+R+ESLH  +    +  +  E+     + F+  S   ++    L
Sbjct: 183 LGTMLEMIIRNESLHCFYFSHKVKLLLKESDPKEVERFKAWSYETVNHFVKL 234


>gi|322707634|gb|EFY99212.1| fungal specific transcription factor domain protein [Metarhizium
           anisopliae ARSEF 23]
          Length = 512

 Score = 34.6 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 18/52 (34%), Gaps = 10/52 (19%)

Query: 45  SRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQIGLEPL 96
           + +M  E T  E  +A        +G+N                 ++G +P+
Sbjct: 147 AESMCDEVTEAEKLFARALAQARLIGMNKKDFAD----------AEVGFDPV 188


>gi|327399293|ref|YP_004340162.1| AAA ATPase [Hippea maritima DSM 10411]
 gi|327181922|gb|AEA34103.1| AAA ATPase [Hippea maritima DSM 10411]
          Length = 282

 Score = 34.6 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 27/105 (25%)

Query: 2   VGIAEQYQ--YIMRDESLHLNF---------------GIDVINQIKIENPHLWTKEFQQK 44
           VG+ +  +   I+ DES H++F                  ++  + +    L  K  Q K
Sbjct: 114 VGLYKSNKNALIIVDESQHMSFESMEMLRQISNIEMENAKLVQILLVGQSELINKLNQDK 173

Query: 45  SRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRCH 89
            R +        +AY          GL+    + Y++F  N+   
Sbjct: 174 YRQIKQR-----VAYWVY-----LKGLSLEETKAYIEFRTNQALK 208


>gi|327440682|dbj|BAK17047.1| ribonucleotide reductase, beta subunit [Solibacillus silvestris
           StLB046]
          Length = 294

 Score = 34.6 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 2   VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHE 51
            G     + + RDE  H+ FG  +I ++  ENP L   E  ++ +  L E
Sbjct: 185 PGFISGIRNVKRDEGRHIGFGTFLIQRLISENPEL---ELFERVQQRLQE 231


>gi|229542954|ref|ZP_04432014.1| Na+/H+ antiporter [Bacillus coagulans 36D1]
 gi|229327374|gb|EEN93049.1| Na+/H+ antiporter [Bacillus coagulans 36D1]
          Length = 679

 Score = 34.6 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 20  NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQY 79
           +   ++++Q+K E   + + EF++       +A   E  Y +  M    +  +      +
Sbjct: 459 DNYQNMLHQLKAEESEIDSLEFKRIETETRMKALEAETEYINALMKSKRI--DQEMAFLF 516

Query: 80  MQFI 83
           +++I
Sbjct: 517 LEYI 520


>gi|259649436|dbj|BAI41598.1| phage terminase large subunit [Lactobacillus rhamnosus GG]
          Length = 446

 Score = 34.2 bits (78), Expect = 5.5,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 97  FKYTENPFPWMSEVID-LKKEKNFF 120
           +   +NP+ W++E ID ++ + +FF
Sbjct: 166 YNPPKNPYDWINEWIDSVRGDPDFF 190


>gi|258508120|ref|YP_003170871.1| phage-related terminase large subunit [Lactobacillus rhamnosus GG]
 gi|257148047|emb|CAR87020.1| Phage-related terminase, large subunit [Lactobacillus rhamnosus GG]
          Length = 453

 Score = 34.2 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 97  FKYTENPFPWMSEVID-LKKEKNFF 120
           +   +NP+ W++E ID ++ + +FF
Sbjct: 173 YNPPKNPYDWINEWIDSVRGDPDFF 197


>gi|15242638|ref|NP_198845.1| metal-dependent phosphohydrolase HD domain-containing protein
           [Arabidopsis thaliana]
 gi|332007147|gb|AED94530.1| metal-dependent phosphohydrolase HD domain-containing protein
           [Arabidopsis thaliana]
          Length = 448

 Score = 34.2 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 37/101 (36%), Gaps = 10/101 (9%)

Query: 18  HLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATL-------LEIAYAHETMPKGFVG 70
           H    I++I+ I   +      +  ++ + M+  +T         E  + ++ +  G  G
Sbjct: 139 HELMSINMIDYIVDTHHIDVDAKMLKRVKDMILASTEVSELKGNAEKRFLYDIVANGRNG 198

Query: 71  LNAPSCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVI 111
           ++      Y+  + + R   +G    F+    P   +   I
Sbjct: 199 IDVDKF-DYI--VRDSRACGLGCNFQFQRLTEPMRVIDNEI 236


>gi|268320098|ref|YP_003293754.1| ribonucleoside-diphosphate reductase beta chain [Lactobacillus
           johnsonii FI9785]
 gi|262398473|emb|CAX67487.1| ribonucleoside-diphosphate reductase beta chain [Lactobacillus
           johnsonii FI9785]
          Length = 313

 Score = 34.2 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 31/102 (30%), Gaps = 10/102 (9%)

Query: 21  FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM 80
           F  D     K E   +           +       E+++         +       E Y+
Sbjct: 204 FRRDFFKLSKKEQNKVH-----DWVYDLCDNLYDNELSHIKLLYQNTDL---EDKVEHYI 255

Query: 81  QFIANRRCHQIGLEPLFKYTENPFPWM--SEVIDLKKEKNFF 120
            +  N+    +G EP +         +  + +++    K+FF
Sbjct: 256 HYTLNKALMNLGQEPKYPENVETLDPILTTGLMESAMIKDFF 297


>gi|157414325|ref|YP_001481581.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81116]
 gi|157385289|gb|ABV51604.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81116]
          Length = 769

 Score = 34.2 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 19  LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 74
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 75  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKANN 610


>gi|47210379|emb|CAF95574.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2307

 Score = 34.2 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 32/85 (37%), Gaps = 4/85 (4%)

Query: 30  KIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM----QFIAN 85
           K E        ++++ + ++  A  LE    H+         N     +Y+    +    
Sbjct: 557 KHEAIETDIAAYEERVQAVVAVARELEAERYHDIKRVAARKENVLRLWEYLLELLKARRR 616

Query: 86  RRCHQIGLEPLFKYTENPFPWMSEV 110
           R    +GL+ LF+   +   WM E+
Sbjct: 617 RLEKNLGLQRLFQEMLHIMDWMDEM 641


>gi|328768069|gb|EGF78116.1| hypothetical protein BATDEDRAFT_37293 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 356

 Score = 33.8 bits (77), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 8/80 (10%)

Query: 36  LWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGL-------NAPSCEQYMQFIANRRC 88
           L  +   Q    M   A   E     +        +          + +  ++F+ +   
Sbjct: 239 LVRRADTQLVHLMARAAVAAEHTLIDDVFNLSTGNILLCGKIVPKEALKGRIEFLTDMCL 298

Query: 89  HQIGLEPLFKYTENPFPWMS 108
             +G   ++ + ++P PW+S
Sbjct: 299 TTMGYPAMY-HVQDPIPWIS 317


>gi|3695371|gb|AAC62775.1| DNA gyrase subunit B [Campylobacter jejuni]
          Length = 685

 Score = 33.8 bits (77), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 19  LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 74
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 477 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 533

Query: 75  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 534 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 581


>gi|307746967|gb|ADN90237.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni M1]
 gi|315931303|gb|EFV10272.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 327]
          Length = 769

 Score = 33.8 bits (77), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 19  LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 74
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 75  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|205355744|ref|ZP_03222514.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346521|gb|EDZ33154.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 769

 Score = 33.8 bits (77), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 19  LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 74
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 75  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|114800441|ref|YP_760279.1| hypothetical protein HNE_1568 [Hyphomonas neptunium ATCC 15444]
 gi|114740615|gb|ABI78740.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
          Length = 370

 Score = 33.8 bits (77), Expect = 7.1,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 6   EQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRT---MLHE---ATLLEIAY 59
           +    +MRDE  H+ FG++ +       P    +E  Q +     ++ E   +T++E  +
Sbjct: 229 QILHLVMRDEGRHVAFGVNYLEDWIKALPEEQIEERAQFAFEACAIMRERLFSTIVEEEF 288

Query: 60  AHE 62
             +
Sbjct: 289 GFD 291


>gi|153951349|ref|YP_001397276.1| DNA gyrase subunit B [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938795|gb|ABS43536.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. doylei 269.97]
          Length = 769

 Score = 33.8 bits (77), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 19  LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 74
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 75  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|86153959|ref|ZP_01072161.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842497|gb|EAQ59710.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 769

 Score = 33.8 bits (77), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 19  LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 74
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 75  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|88597733|ref|ZP_01100966.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218561696|ref|YP_002343475.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|9297098|sp|O87667|GYRB_CAMJE RecName: Full=DNA gyrase subunit B
 gi|88190037|gb|EAQ94013.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359402|emb|CAL34184.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284925306|gb|ADC27658.1| DNA gyrase B subunit [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315928458|gb|EFV07770.1| DNA gyrase B subunit [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315930330|gb|EFV09418.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 305]
          Length = 769

 Score = 33.8 bits (77), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 19  LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 74
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 75  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|148926822|ref|ZP_01810501.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145844547|gb|EDK21654.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 769

 Score = 33.8 bits (77), Expect = 7.2,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 19  LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 74
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 75  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|119476050|ref|ZP_01616402.1| 3-hydroxybutyryl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
 gi|119450677|gb|EAW31911.1| 3-hydroxybutyryl-CoA dehydrogenase [marine gamma proteobacterium
           HTCC2143]
          Length = 495

 Score = 33.8 bits (77), Expect = 7.3,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 6/76 (7%)

Query: 22  GIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQ 81
            I +  ++ +E  H+  KE +      L EA   E  +    +  G         +  ++
Sbjct: 165 AIAIYTELGMEALHIK-KEIEAFVADRLLEAVWRESLWL---IKDGIA--TTEEIDDAIR 218

Query: 82  FIANRRCHQIGLEPLF 97
           F    R  Q+GL   +
Sbjct: 219 FGFGLRWAQMGLFETY 234


>gi|57236917|ref|YP_178032.1| DNA gyrase subunit B [Campylobacter jejuni RM1221]
 gi|57165721|gb|AAW34500.1| DNA gyrase, B subunit [Campylobacter jejuni RM1221]
          Length = 769

 Score = 33.8 bits (77), Expect = 7.3,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 19  LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 74
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 75  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|86150547|ref|ZP_01068771.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|86152360|ref|ZP_01070570.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 260.94]
 gi|121612557|ref|YP_999722.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167004699|ref|ZP_02270457.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni 81-176]
 gi|315123619|ref|YP_004065623.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85838999|gb|EAQ56264.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85840657|gb|EAQ57909.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 260.94]
 gi|87249029|gb|EAQ71991.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 81-176]
 gi|315017341|gb|ADT65434.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 769

 Score = 33.8 bits (77), Expect = 7.3,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 19  LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 74
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 75  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|48094245|gb|AAT40430.1| DNA gyrase subunit B [Campylobacter jejuni]
 gi|315057444|gb|ADT71773.1| DNA gyrase subunit B [Campylobacter jejuni subsp. jejuni S3]
          Length = 769

 Score = 33.8 bits (77), Expect = 7.5,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 19  LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 74
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVANGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 75  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|283956181|ref|ZP_06373666.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792335|gb|EFC31119.1| DNA gyrase, B subunit [Campylobacter jejuni subsp. jejuni 1336]
          Length = 769

 Score = 33.8 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)

Query: 19  LNFGIDVINQIKIENPHLWTKE----FQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAP 74
           L F    +N++         +     +++  + +  +    E A +   +  G  GLN  
Sbjct: 506 LTFFFRFMNELVTNGHIYLAQPPLYLYKKAKKQIYLKD---EKALSEYLIETGIEGLNYE 562

Query: 75  -----SCEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKN 118
                  + Y++ +A  R     LE  F        +M E  +L K  N
Sbjct: 563 GIGMNDLKDYLKIVAAYRAILKDLEKRFNVIS-VIRYMIENSNLVKGNN 610


>gi|229489433|ref|ZP_04383296.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
           erythropolis SK121]
 gi|229323530|gb|EEN89288.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
           erythropolis SK121]
          Length = 318

 Score = 33.8 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%)

Query: 1   MVGIAEQYQYIMRDESLHL---NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI 57
           + G+ +  + I  DE  H+    F       +  ++ +      QQ+   ++  A  + I
Sbjct: 193 LPGMQQLVRKIGDDERRHMAWGTFTCR--RHVAADDHNW--DVVQQRMGELMPMALGM-I 247

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQI 91
            + ++       GL+     +Y    A RR   I
Sbjct: 248 NWVNDQFEVQPFGLDNQEFLEYAADRAQRRLSAI 281


>gi|226305446|ref|YP_002765406.1| hypothetical protein RER_19590 [Rhodococcus erythropolis PR4]
 gi|226184563|dbj|BAH32667.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 318

 Score = 33.4 bits (76), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 8/94 (8%)

Query: 1   MVGIAEQYQYIMRDESLHL---NFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI 57
           + G+ +  + I  DE  H+    F       +  ++ +      QQ+   ++  A  + I
Sbjct: 193 LPGMQQLVRKIGDDERRHMAWGTFTCR--RHVAADDHNW--DVVQQRMGELMPMALGM-I 247

Query: 58  AYAHETMPKGFVGLNAPSCEQYMQFIANRRCHQI 91
            + ++       GL+     +Y    A RR   I
Sbjct: 248 NWVNDQFEVQPFGLDNQEFLEYAADRAQRRLSAI 281


>gi|228989769|ref|ZP_04149749.1| Von Willebrand factor type A domain protein [Bacillus
           pseudomycoides DSM 12442]
 gi|228769916|gb|EEM18499.1| Von Willebrand factor type A domain protein [Bacillus
           pseudomycoides DSM 12442]
          Length = 627

 Score = 33.4 bits (76), Expect = 9.2,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 7/82 (8%)

Query: 5   AEQYQYIMRDESLHLN-FGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL----EIAY 59
             Q + I R  + H +         +  +   ++  E+ ++   +LHEA       +  Y
Sbjct: 141 GSQNE-INRVRNYHGDRLFCLCYLSLTSDKYEMFNNEYFEQIEAILHEAFQARNTEDTMY 199

Query: 60  AHETMPKGFVG-LNAPSCEQYM 80
             E +     G L       Y 
Sbjct: 200 IVEKIRYRLEGFLENDMINNYF 221


>gi|169611452|ref|XP_001799144.1| hypothetical protein SNOG_08839 [Phaeosphaeria nodorum SN15]
 gi|160702294|gb|EAT84007.2| hypothetical protein SNOG_08839 [Phaeosphaeria nodorum SN15]
          Length = 831

 Score = 33.4 bits (76), Expect = 9.2,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 22/47 (46%)

Query: 42  QQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFIANRRC 88
           + + R ++ EA     A+   T+    +GLNA       +++++ + 
Sbjct: 102 RNRVRRIVAEAYDAGQAWIVVTLVGAAIGLNAAILNIVTEWLSDIKL 148


>gi|167772152|ref|ZP_02444205.1| hypothetical protein ANACOL_03527 [Anaerotruncus colihominis DSM
           17241]
 gi|167665950|gb|EDS10080.1| hypothetical protein ANACOL_03527 [Anaerotruncus colihominis DSM
           17241]
          Length = 745

 Score = 33.4 bits (76), Expect = 9.4,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 4/81 (4%)

Query: 23  IDVINQIKIENPHLWTKEFQQKSRTMLHEATLL--EIAYAHETMPKGFVGLNAPSCEQYM 80
             V  Q+  +   L   E   +    + +A  +  E     E +P   +G          
Sbjct: 376 RRVFRQLNKKKEKLHLLEGLSRILLDIDKAVRIVRETQEEREVVPNLMIGFGIDEV--QA 433

Query: 81  QFIANRRCHQIGLEPLFKYTE 101
           +++A  R  Q+  E + K TE
Sbjct: 434 EYVAEIRLRQLNREHILKRTE 454


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.314    0.183    0.654 

Lambda     K      H
   0.267   0.0561    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,360,442,771
Number of Sequences: 13984884
Number of extensions: 162036771
Number of successful extensions: 365463
Number of sequences better than 10.0: 2570
Number of HSP's better than 10.0 without gapping: 3485
Number of HSP's successfully gapped in prelim test: 837
Number of HSP's that attempted gapping in prelim test: 355770
Number of HSP's gapped (non-prelim): 4635
length of query: 136
length of database: 4,792,584,752
effective HSP length: 101
effective length of query: 35
effective length of database: 3,380,111,468
effective search space: 118303901380
effective search space used: 118303901380
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 77 (33.8 bits)