HHsearch alignment for GI: peg_753 and conserved domain: PRK05673
>PRK05673 dnaE DNA polymerase III subunit alpha; Validated.
Probab=100.00 E-value=0 Score=2557.46 Aligned_cols=1014 Identities=50% Similarity=0.822 Sum_probs=973.1
Q ss_pred CCCCHHHHHHCHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCC
Q ss_conf 98813343314447644329989999999978998899811651774999999999769963899999985476643344
Q 537021.9.peg.7 8 SPSFVHLQVHSSYSLLEGALSLNNILDKIAADQQPAIAITDTNNLFSALEFSQKACAAGIQPIIGCQLDIDMQDNLKMTN 87 (1033)
Q Consensus 8 ~~~FvhLh~hS~ySlldg~~~~e~LV~~A~~~G~~AiAITD~~nl~Gav~F~~ackk~gIKPIiG~E~~v~~~~~~~~~~ 87 (1033)
T Consensus 1 ~~~FvhLhvhS~ySlLdg~~~~~eLv~~A~~~G~~AlAiTD~~nl~Gav~F~~aak~~gIKPIiG~e~~v~~~~~~~~~- 79 (1143)
T PRK05673 1 DPRFVHLHVHSEYSLLDGAAKIKPLVKKAAELGMPAVALTDHGNLFGAVEFYKAAKGAGIKPIIGCEAYVAPEDKDDVS- 79 (1143)
T ss_pred CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCC-
T ss_conf 9982100337637120316699999999998599989997277050599999999986998378889997268533455-
Q ss_pred CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCHHHH
Q ss_conf 56566667753999956968999999999899732487787400789998634898899819767967888877997899
Q 537021.9.peg.7 88 QGKTPFPTVPSIVLLVSTAEGYQRLIELVSRMYLLDQGKQSVRICLSWLQEIGTEGLIMLTGGSSGPIDRAFFFNSSQVA 167 (1033)
Q Consensus 88 ~~~~~~~~~~~lvlLAkN~~Gy~nL~kL~S~a~~~~~~~~~p~i~~~~L~e~~~egLIvlsg~~~g~i~~~l~~~~~~~a 167 (1033)
T Consensus 80 ----~~~~~~hLvlLAkN~~GY~NL~kL~S~a~~~g~~~~~Prid~e~L~~-~~eGLI~lsgc~~g~i~~~l~~~~~~~A 154 (1143)
T PRK05673 80 ----GGGAYTHLTLLAKNETGYRNLMKLSSRAYLEGQRYYRPRIDREWLAE-HSEGLIALSGCPSGEVGTALLAGNYEEA 154 (1143)
T ss_pred ----CCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH-HCCCEEEECCCCCCHHHHHHHCCCHHHH
T ss_conf ----67877508999589999999999999999706578888358999987-0699699618865669999866999999
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCHHH-HHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99999998765986899994399115-89999999999981898998088300787889999876688469857653100
Q 537021.9.peg.7 168 EKRLLTFKKLFGDRLYVNLQRHRGYD-RYRESQVVQLAYTHELPLVATNNSLFLSEEDYEAHDVLMAVAHSTVVSQKDRP 246 (1033)
Q Consensus 168 ~~~l~~l~~~Fgd~~ylEl~~~~~~e-~~~~~~l~~lA~~~~iPlVaTndv~Y~~~~D~~~h~iL~aI~~~~~l~~~~~~ 246 (1033)
T Consensus 155 ~~~~~~l~~iFgd~fylElq~hg~~~~~~~~~~L~~lA~~~~iplVATndvhYl~~eD~~~hdvL~aI~~g~~l~d~~r~ 234 (1143)
T PRK05673 155 EEAAAFYQEIFGDRFYLELQRHGLPDEERVEHALLELAKELGLPLVATNDVHFLTPEDFEAHEALLCIAEGKTLDDPKRF 234 (1143)
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 99999999876986899984489827999999999999982999899688651786368999999999769900436200
Q ss_pred CC-CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 24-53432343478875122035899878864111000133221023455575688776898899987654103420124
Q 537021.9.peg.7 247 RV-TPDHYLKNRSEMVSIFSDLPEALENTVEIARRCSFILQVHAPILPRFIEKECDDIQKEEENELRNKAVAGLEVRLAQ 325 (1033)
Q Consensus 247 ~~-~~~~yLks~eEM~~~f~~~peAi~NT~~IAe~c~~~l~~~~~~lP~f~~p~~~~~~~~~~~~Lr~l~~~Gl~~R~~~ 325 (1033)
T Consensus 235 ~~~~~e~yLKS~eEM~~lF~d~PeAl~NT~~IAe~C~~~l~~~~~~lP~f~~p~g----~~~~~~L~~l~~~Gl~~R~~~ 310 (1143)
T PRK05673 235 KFYSPEQYLKSPEEMAELFADLPEALENTVEIAERCNVTVRLGKPFLPNFPTPEG----MTEEDYLRKEAKEGLEERLAF 310 (1143)
T ss_pred CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHH
T ss_conf 0377221689999999997536999999999984403640557777998889999----999999999999999998530
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCHHH
Q ss_conf 64324578389999988778989860630557888999998510476433444420466776554403756333231056
Q 537021.9.peg.7 326 GAIAKGYHAQDYRQRLDFELNVIARMKFSGYFLIVADFIQWAKKNNIPVGPGRGSGAGSVTAYALTITDIDPLRFSLLFE 405 (1033)
Q Consensus 326 ~~~~~~~~~~~y~~RLe~EL~vI~~~gf~~YFLiV~Div~~ak~~gI~vGpGRGSAagSLVaY~LgIT~VDPi~~~LlFE 405 (1033)
T Consensus 311 ~~~--~~~~~~y~~RL~~EL~vI~~mgf~~YFLIV~D~v~~Ar~~gI~vGpGRGSaAgSLVaY~LgIT~VDPi~~~LlFE 388 (1143)
T PRK05673 311 LFP--ADEREEYRERLEYELDVIIQMGFPGYFLIVADFIKWAKDNGIPVGPGRGSGAGSLVAYALGITDLDPLRYDLLFE 388 (1143)
T ss_pred CCC--CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHH
T ss_conf 588--411199999999999999868984658999999999995388757887753889999983787658211665486
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 76210014578753336568789999999830380215542207787788999999975279988988654310145898
Q 537021.9.peg.7 406 RFLNPDRMSMPDFDIDFCQDRRDEVIRYVQNKYGHERVAQIITFGSLQAKAALRDVGRALQMPYSQVDRLCKLIPNDPAH 485 (1033)
Q Consensus 406 RFLnp~R~~~PDIDiDf~~~~R~~vi~y~~~kyG~~~va~i~t~~t~~~k~aird~~r~~g~~~~~~~~~~~~i~~~~~~ 485 (1033)
T Consensus 389 RFLnpeR~smPDIDiDf~~~rR~eVi~Yv~~kYG~~~VAqI~Tf~t~~ak~AiRDv~Rvlg~~~~~~d~iak~ip~~~~~ 468 (1143)
T PRK05673 389 RFLNPERVSMPDFDIDFCQDRRDEVIDYVAEKYGRDAVAQIITFGTMKAKAVIRDVGRVLGMPYGFVDRITKLIPPDPGK 468 (1143)
T ss_pred HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
T ss_conf 61571014788766554223189999999998564757888546677787899999998689999999998527766789
Q ss_pred CCCHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHEECCCCCCCCCEEEEEECHHHHH
Q ss_conf 24434452298878864307420268898720112210024474403352566666200123676886688510213343
Q 537021.9.peg.7 486 PVSLQAIADDSRFREARLADPSVDRLLEISQKLEGLYRHASTHAAGIVIGDRPLSQLVPMYRDVRSDLPVTQFNMKWIEK 565 (1033)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~leg~~r~~~~Ha~Gvvi~~~~l~~~~p~~~~~~~~~~~~q~d~~~~e~ 565 (1033)
T Consensus 469 ~tl~~a~~~~~~l~~~~~~~~~~~~l~~~a~~leG~~r~~~~Ha~GvVis~~~l~~~~Pl~~~~~~~~~~tq~d~~~~e~ 548 (1143)
T PRK05673 469 ITLAKAYEEEPELRELYESDPEVKRLIDMARKLEGLTRNAGVHAAGVVISPTPLTDFVPLYKDPKSGMPVTQFDMKDVEA 548 (1143)
T ss_pred CCHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCEEEEECHHHHHH
T ss_conf 88999987499999888549889999999999848854335678838951776222067677588995578721898997
Q ss_pred HCCCHHHHHHHCCHHHHHHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHCCCHHHHHH
Q ss_conf 11232135654178999999998874-02543433234435889987620141012211453478888771740488887
Q 537021.9.peg.7 566 AGLIKFDFLGLKTLTLLQKSLDFLAQ-RGVKVDLSLIPFDDHETYHLLTTKGTLGIFQLESSGMRQALEGMQPDCIEDII 644 (1033)
Q Consensus 566 ~gl~K~D~Lgl~~L~~i~~~~~~i~~-~~~~~d~~~ip~~D~~~~~l~~~g~t~GvFQ~es~~~~~~l~~~~p~~~~dl~ 644 (1033)
T Consensus 549 ~GllK~D~Lgl~~Lt~i~~~~~~i~~~~~~~~d~~~ipldD~~t~~ll~~g~T~GvFQ~ES~g~~~~l~~l~P~~f~dlv 628 (1143)
T PRK05673 549 AGLVKFDFLGLRTLTIIDWALKLIKKRGGIDVDLAAIPLDDKKTYELLQRGETLGVFQLESRGMRDLLKRLKPDCFEDII 628 (1143)
T ss_pred CCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
T ss_conf 48841003234607899999999998349988865578873999999845785773113576799989755999899978
Q ss_pred HHHHHCCCHHHHH--HHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
Q ss_conf 6654114113420--03688850465785026966733410335530012568988788632684130788976201211
Q 537021.9.peg.7 645 ALVSLYRPGPIDN--IVVYNNRKNGKEKIVSIHPLIDPMLKETQGVIIYQEQVMQIAQLLSGYSLSEADVLRRAMGKKIK 722 (1033)
Q Consensus 645 ~~~al~RPGp~~~--~~~yi~rk~g~e~~~~~hp~l~~iL~~T~Gv~vyQEQvm~ia~~~ag~~~~ead~lRra~~kk~~ 722 (1033)
T Consensus 629 a~~aL~RPGP~~~~~i~~yi~rk~g~e~i~y~hp~l~~iL~~TyGv~vyQEQvM~ia~~~agfslgeAD~lRram~KK~~ 708 (1143)
T PRK05673 629 ALVALYRPGPMESGMIPDFIDRKHGREEIEYPHPELEPILKETYGIIVYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKP 708 (1143)
T ss_pred HHHHHCCCCCHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCH
T ss_conf 88741067742530371789964799763068778998862237778739999999999737987888999987611356
Q ss_pred CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 01677878999998624999999999999999750001331014788899999999997302666777510023542025
Q 537021.9.peg.7 723 EEMDKQKERFISGASKNGISKTIAVNIFELLAKFADYGFNKSHAAAYAVISYQTAWMKTHYPVEFLAASMTLEMDNVEKI 802 (1033)
Q Consensus 723 ~~~~~~~~~f~~g~~~~g~~~~~a~~i~~~i~~f~~Y~FnksHa~aya~~~y~~aylK~~yP~eF~aa~L~~~~~~~~~~ 802 (1033)
T Consensus 709 ~~m~~~~~~F~~ga~~~G~~~~~a~~i~~~i~~Fa~YgFnkSHa~aYa~iayqtAyLKahyP~eF~aalL~~~~~~~~k~ 788 (1143)
T PRK05673 709 EEMAKQREIFVEGAKKNGIDKELADKIFDLLEKFAGYGFNKSHAAAYALVSYQTAYLKAHYPAEFMAALLTSDMDNTDKV 788 (1143)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHH
T ss_conf 78999999999989876999999999999999771435574235899999999999856586999999974077884679
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHH
Q ss_conf 89998888636850355233421003531986985026858969899999999983799999789997348247998999
Q 537021.9.peg.7 803 KKFCQDARQFNIQIMPPSVNTPCVDFKVGDNRIYYSLAAIKGVGTTTARHIMEASADKPFDSLEDFCSRVDSKKLNRRVL 882 (1033)
Q Consensus 803 ~~~i~e~~~~gi~vl~PdIN~S~~~f~~~~~~Ir~Gl~~Ikgvg~~~~~~Ive~r~~g~f~sl~df~~rv~~~~~nk~~l 882 (1033)
T Consensus 789 ~~~i~ea~~~gi~vlppdin~S~~~f~~~~~~Ir~gL~~Ikgvg~~~~~~Iv~~R~~g~f~s~~Df~~Rv~~~~~nk~~l 868 (1143)
T PRK05673 789 AVYLDECRRMGIKVLPPDVNESLYRFTVVGGDIRYGLGAIKGVGEGAVEAIVEAREKGPFKDLFDFCARVDLKKVNKRVL 868 (1143)
T ss_pred HHHHHHHHHCCCCEECCEECCCCCCCEECCCEEEEHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHH
T ss_conf 99999999879917587431356873653998987167506787999999999863499999899999823112699999
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEE
Q ss_conf 98886767234790389999989999999998865431277786666555565577666899998889998578872621
Q 537021.9.peg.7 883 ESLVFAGALDCFGYSRMQLLQSLDNIQKYAQWVEKNRTNKHENIFAHEKGTFSDKITLEKFSVENSSVRFENEQRVLGFY 962 (1033)
Q Consensus 883 e~Li~aGAfD~~~~~R~~ll~~i~~~~~~~~~~~~~~~~~q~~LF~~~~~~~~~~~~~~~~~~~~~~e~l~~E~e~LGf~ 962 (1033)
T Consensus 869 e~Li~aGAfD~~~~~R~~ll~~~~~~~~~~~~~~~~~~~gq~~LF~~~~~~~~~~~~~~~~~e~~~~e~l~~E~e~lG~y 948 (1143)
T PRK05673 869 ESLIKAGAFDSLGPNRAALLASLEDAIDAADQHAKAEASGQFDLFGVEPEAEDVEQSLPDVPEWPDKERLAGERETLGLY 948 (1143)
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99997798200160199999969999999999757775487222445555555567778999999778999999984707
Q ss_pred ECCCCHHHHHHHHHHCCCCCHHHHHCCCCCC-EEEEEEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEECC
Q ss_conf 1638558999999874897688985055898-8999999961121015888769999998497049999539
Q 537021.9.peg.7 963 FSGHPLDVYKPILRKMGIKGYEESVATIRGN-NIRLAAMVVSKQQKKTRKGSRIGWVTFSEPAKEYEANFFP 1033 (1033)
Q Consensus 963 lS~HPl~~~~~~l~~~~~~~~~~~~~~~~g~-~v~iaG~V~~i~~~~TKkG~~mafltleD~~g~~e~~iFP 1033 (1033)
T Consensus 949 lS~HPl~~~~~~l~~~~~~~~~~l~~~~~~~~~v~vaG~v~~~~~~~TkkG~~maf~tleD~tg~~e~vvfp 1020 (1143)
T PRK05673 949 LSGHPLDGYEDELRRLVVTRLADLEPAERGKVAVTVAGLIVSVRVRVTKRGNKMAIVTLEDRSGRIEVMLFS 1020 (1143)
T ss_pred CCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEEEEEECCCCEEEEECH
T ss_conf 663818899999998578669998505489849999999989785117998989999999899848999979