HHsearch alignment for GI: peg_753 and conserved domain: PRK06826
>PRK06826 dnaE DNA polymerase III DnaE; Reviewed.
Probab=100.00 E-value=0 Score=2513.79 Aligned_cols=1007 Identities=40% Similarity=0.686 Sum_probs=963.4
Q ss_pred CCCCHHHHHHCHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCC
Q ss_conf 98813343314447644329989999999978998899811651774999999999769963899999985476643344
Q 537021.9.peg.7 8 SPSFVHLQVHSSYSLLEGALSLNNILDKIAADQQPAIAITDTNNLFSALEFSQKACAAGIQPIIGCQLDIDMQDNLKMTN 87 (1033)
Q Consensus 8 ~~~FvhLh~hS~ySlldg~~~~e~LV~~A~~~G~~AiAITD~~nl~Gav~F~~ackk~gIKPIiG~E~~v~~~~~~~~~~ 87 (1033)
T Consensus 3 ~~~FvhLhvhS~YSlLdga~~i~eLv~~Ake~G~~AlALTD~~nl~Gav~Fy~aakk~GIKPIIG~E~~v~~~~~~~k~- 81 (1157)
T PRK06826 3 KKSFVHLHVHTEYSLLDGSGKIKDLIKRAKELGMKSIAITDHGVMYGVVDFYKAAKKQGIKPIIGCEVYVAPRSMHDKE- 81 (1157)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCC-
T ss_conf 9983121566637110506599999999998599989997388586899999999987998144558996687411256-
Q ss_pred CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCHHHH
Q ss_conf 56566667753999956968999999999899732487787400789998634898899819767967888877997899
Q 537021.9.peg.7 88 QGKTPFPTVPSIVLLVSTAEGYQRLIELVSRMYLLDQGKQSVRICLSWLQEIGTEGLIMLTGGSSGPIDRAFFFNSSQVA 167 (1033)
Q Consensus 88 ~~~~~~~~~~~lvlLAkN~~Gy~nL~kL~S~a~~~~~~~~~p~i~~~~L~e~~~egLIvlsg~~~g~i~~~l~~~~~~~a 167 (1033)
T Consensus 82 --~~~~~~~~~LvLLAkN~~GY~nL~kL~S~a~~e-g~~~kPrid~~~L~~-~~eGLI~lsgcl~G~i~~~ll~~~~e~A 157 (1157)
T PRK06826 82 --PDIDNETYHLVLLAKNEIGYKNLMKIVSKASIE-GFYYKPRVDHELLKE-HSEGLIALSACLAGEVQSLILKGNYEKA 157 (1157)
T ss_pred --CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHH-CCCCCEEECCCCCCHHHHHHHCCCHHHH
T ss_conf --677787523999958999999999999999871-786788789999996-0799699358754538898856999999
Q ss_pred HHHHHHHHHHCC-CCEEEEEECCCHHHH-HHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 999999987659-868999943991158-999999999998189899808830078788999987668846985765310
Q 537021.9.peg.7 168 EKRLLTFKKLFG-DRLYVNLQRHRGYDR-YRESQVVQLAYTHELPLVATNNSLFLSEEDYEAHDVLMAVAHSTVVSQKDR 245 (1033)
Q Consensus 168 ~~~l~~l~~~Fg-d~~ylEl~~~~~~e~-~~~~~l~~lA~~~~iPlVaTndv~Y~~~~D~~~h~iL~aI~~~~~l~~~~~ 245 (1033)
T Consensus 158 ~~~~~~l~~iFg~d~fyLElq~~g~~~~~~~n~~l~~lA~~~~iplVATndvhYl~~eD~~~hdvL~cI~~g~tl~d~~r 237 (1157)
T PRK06826 158 KEAALFYKDIFGKENFYLELQDHGIPEQKKVNEELIKLSKELGIPLVATNDVHYIRKEDAKAHDVLLCIQTGKTVDDENR 237 (1157)
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999999985889699997218986899999999999998499989978866578736999999999867996052740
Q ss_pred CCC-CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 024-5343234347887512203589987886411100013322102345557568877689889998765410342012
Q 537021.9.peg.7 246 PRV-TPDHYLKNRSEMVSIFSDLPEALENTVEIARRCSFILQVHAPILPRFIEKECDDIQKEEENELRNKAVAGLEVRLA 324 (1033)
Q Consensus 246 ~~~-~~~~yLks~eEM~~~f~~~peAi~NT~~IAe~c~~~l~~~~~~lP~f~~p~~~~~~~~~~~~Lr~l~~~Gl~~R~~ 324 (1033)
T Consensus 238 ~~~~~~e~yLKs~~EM~~lF~d~peAl~NT~~IA~rC~~~l~~~~~~lP~~~~p~g----~~~~~~L~~l~~~Gl~~r~~ 313 (1157)
T PRK06826 238 MRFPSDEFYLKSPEEMYELFSYVPEALENTVKIAEECNVEFEFGESKLPKFPLPEG----VDPYEYLRELCYEGLIKRYE 313 (1157)
T ss_pred CCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHCC
T ss_conf 01787334679999999874015999999999997331013568878987778889----99899999999977887527
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCHH
Q ss_conf 46432457838999998877898986063055788899999851047643344442046677655440375633323105
Q 537021.9.peg.7 325 QGAIAKGYHAQDYRQRLDFELNVIARMKFSGYFLIVADFIQWAKKNNIPVGPGRGSGAGSVTAYALTITDIDPLRFSLLF 404 (1033)
Q Consensus 325 ~~~~~~~~~~~~y~~RLe~EL~vI~~~gf~~YFLiV~Div~~ak~~gI~vGpGRGSAagSLVaY~LgIT~VDPi~~~LlF 404 (1033)
T Consensus 314 ~-------~~~~~~~Rl~~EL~vI~~~gf~~YFLIV~D~i~~Ar~~gI~vGpGRGSaAgSlVaY~LgIT~vDPi~y~LlF 386 (1157)
T PRK06826 314 N-------PSEELIERLEYELSVIKQMGYVDYFLIVWDFIKFAKENGIPVGPGRGSAAGSLVAYTLGITKIDPIKYNLLF 386 (1157)
T ss_pred C-------CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCCCCHHHCCCCH
T ss_conf 9-------989999999999999985187712368999999998668323688772898999998077624802138769
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
Q ss_conf 67621001457875333656878999999983038021554220778778899999997527998898865431014589
Q 537021.9.peg.7 405 ERFLNPDRMSMPDFDIDFCQDRRDEVIRYVQNKYGHERVAQIITFGSLQAKAALRDVGRALQMPYSQVDRLCKLIPNDPA 484 (1033)
Q Consensus 405 ERFLnp~R~~~PDIDiDf~~~~R~~vi~y~~~kyG~~~va~i~t~~t~~~k~aird~~r~~g~~~~~~~~~~~~i~~~~~ 484 (1033)
T Consensus 387 ERFLnpeR~~mPDIDiDf~~~~R~~vi~yv~~kyG~~~va~i~Tf~t~~~k~airdv~rvlg~~~~~~d~~~k~ip~~~~ 466 (1157)
T PRK06826 387 ERFLNPERVSMPDIDSDFCYERRQEVIDYVVEKYGKDNVAQIITFGTMAARAAIRDVGRALNYPYAEVDRIAKMIPTVLG 466 (1157)
T ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
T ss_conf 98717566788987666650127999999999848555898732000268899999889859999999789873787679
Q ss_pred CCCCHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHEECCCCCCCCCEEEEEECHHHH
Q ss_conf 82443445229887886430742026889872011221002447440335256666620012367688668851021334
Q 537021.9.peg.7 485 HPVSLQAIADDSRFREARLADPSVDRLLEISQKLEGLYRHASTHAAGIVIGDRPLSQLVPMYRDVRSDLPVTQFNMKWIE 564 (1033)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~leg~~r~~~~Ha~Gvvi~~~~l~~~~p~~~~~~~~~~~~q~d~~~~e 564 (1033)
T Consensus 467 ~~l~-~a~~~~~~l~~~~~~~~~~~~~~~~a~~leg~~r~~~~Ha~Gvvi~~~~l~~~~Pl~~~--~~~~~tq~d~~~~e 543 (1157)
T PRK06826 467 ITIE-KALELNPELKELYENDERVKELIDTARALEGMPRHASTHAAGVVIASEPLVEYVPLQKN--EDSIVTQFTMTTLE 543 (1157)
T ss_pred CCHH-HHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHCCCEECC--CCCEEEEEEHHHHH
T ss_conf 9889-99751988998874598899999999997176245577777179606551111780128--98726542678898
Q ss_pred HHCCCHHHHHHHCCHHHHHHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHCCCHHHHH
Q ss_conf 311232135654178999999998874-0254343323443588998762014101221145347888877174048888
Q 537021.9.peg.7 565 KAGLIKFDFLGLKTLTLLQKSLDFLAQ-RGVKVDLSLIPFDDHETYHLLTTKGTLGIFQLESSGMRQALEGMQPDCIEDI 643 (1033)
Q Consensus 565 ~~gl~K~D~Lgl~~L~~i~~~~~~i~~-~~~~~d~~~ip~~D~~~~~l~~~g~t~GvFQ~es~~~~~~l~~~~p~~~~dl 643 (1033)
T Consensus 544 ~~GllK~D~Lgl~~Lt~i~~~~~~i~~~~~~~~d~~~ipldD~~t~~ll~~g~t~GvFQ~Es~g~~~~l~~~~P~~f~dl 623 (1157)
T PRK06826 544 ELGLLKMDFLGLRTLTVIRDAVELIKKNRGIDIDLDKIDYDDKEVYKMIGEGKTVGVFQLESAGMTSFMKELKPDSLEDI 623 (1157)
T ss_pred HCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHH
T ss_conf 73880022004674899999999999833997671457856699999983667377376677279999986599979998
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
Q ss_conf 76654114113420036888504657850269667334103355300125689887886326841307889762012110
Q 537021.9.peg.7 644 IALVSLYRPGPIDNIVVYNNRKNGKEKIVSIHPLIDPMLKETQGVIIYQEQVMQIAQLLSGYSLSEADVLRRAMGKKIKE 723 (1033)
Q Consensus 644 ~~~~al~RPGp~~~~~~yi~rk~g~e~~~~~hp~l~~iL~~T~Gv~vyQEQvm~ia~~~ag~~~~ead~lRra~~kk~~~ 723 (1033)
T Consensus 624 ~a~~aL~RPGp~~~i~~yi~rk~g~~~v~y~hp~l~~iL~~TyGv~vyQEQvM~ia~~~agfs~~eaD~lRram~KK~~~ 703 (1157)
T PRK06826 624 IAGISLYRPGPMDEIPRYIANKNNPEKIEYLHPKLEPILSVTYGCIVYQEQVMQIVRDLAGYSMGRSDLVRRAMSKKKHD 703 (1157)
T ss_pred HHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHH
T ss_conf 86573037750002468998546986777887899976501167796789999999998369867789999870667488
Q ss_pred HHHHHHHHHH------------HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1677878999------------9986249999999999999997500013310147888999999999973026667775
Q 537021.9.peg.7 724 EMDKQKERFI------------SGASKNGISKTIAVNIFELLAKFADYGFNKSHAAAYAVISYQTAWMKTHYPVEFLAAS 791 (1033)
Q Consensus 724 ~~~~~~~~f~------------~g~~~~g~~~~~a~~i~~~i~~f~~Y~FnksHa~aya~~~y~~aylK~~yP~eF~aa~ 791 (1033)
T Consensus 704 ~~~~~~~~F~~g~~~~~~~~~v~g~~~~g~~~~~a~~i~~~i~~Fa~YgFnkSHa~aYa~iay~~AylK~hyP~ef~aa~ 783 (1157)
T PRK06826 704 VMEEERKNFIYGIVDENGNVEVPGCIRNGIDEEVANKIFDSMMDFASYAFNKSHAAAYAVVAYQTAYLKRYYPVEFMAAL 783 (1157)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 99999998650330234567776798869999999999999999723255743236859999999999862879999998
Q ss_pred HCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEHHHHCCCCHHHHHHHHHHH-HCCCCCCHHHHHH
Q ss_conf 100235420258999888863685035523342100353198698502685896989999999998-3799999789997
Q 537021.9.peg.7 792 MTLEMDNVEKIKKFCQDARQFNIQIMPPSVNTPCVDFKVGDNRIYYSLAAIKGVGTTTARHIMEAS-ADKPFDSLEDFCS 870 (1033)
Q Consensus 792 L~~~~~~~~~~~~~i~e~~~~gi~vl~PdIN~S~~~f~~~~~~Ir~Gl~~Ikgvg~~~~~~Ive~r-~~g~f~sl~df~~ 870 (1033)
T Consensus 784 l~~~~~~~~k~~~~~~e~~~~gi~vlpPdIn~S~~~f~~~~~~Ir~gl~~Ikgvg~~~~~~I~~~R~~~G~f~s~~Df~~ 863 (1157)
T PRK06826 784 LNSVMGNSDKVAFYIEECKRLGIEVLPPDINESYSKFTVKGNKIRFGLAAVKNVGENAIDNIVKAREKKGKFTSLVDFCN 863 (1157)
T ss_pred HHHCCCCCCHHHHHHHHHHHCCCEEECCEECCCCCCEEEECCEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 65436895068999999998799597973311388138879978875566268888899999999987799999899998
Q ss_pred HCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC--CCCCCCCCCCCCCCH
Q ss_conf 348247998999988867672347903899999899999999988654312777866665555--655776668999988
Q 537021.9.peg.7 871 RVDSKKLNRRVLESLVFAGALDCFGYSRMQLLQSLDNIQKYAQWVEKNRTNKHENIFAHEKGT--FSDKITLEKFSVENS 948 (1033)
Q Consensus 871 rv~~~~~nk~~le~Li~aGAfD~~~~~R~~ll~~i~~~~~~~~~~~~~~~~~q~~LF~~~~~~--~~~~~~~~~~~~~~~ 948 (1033)
T Consensus 864 Rv~~~~~nk~~lE~Li~aGAfD~~g~~R~~ll~~l~~~l~~~~~~~~~~~~gq~~LF~~~~~~~~~~~~~~~p~~~e~~~ 943 (1157)
T PRK06826 864 RVDTSIINKRAVESLIKAGAFDSFGVYRSQLLAVYEKILDSISKQKKNNIEGQISLFDDIMDMEESSIEIKYPNIKEFDK 943 (1157)
T ss_pred HHCCCCCCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 72542169999999986584222020199999999999999999878655587563346655655555567889999998
Q ss_pred HHHHHHHHHHHCEEECCCCHHHHHHHHHHCCCCCHHHHH---------CCCCCCEEEEEEEEEEEEEECCCCCCEEEEEE
Q ss_conf 899985788726211638558999999874897688985---------05589889999999611210158887699999
Q 537021.9.peg.7 949 SVRFENEQRVLGFYFSGHPLDVYKPILRKMGIKGYEESV---------ATIRGNNIRLAAMVVSKQQKKTRKGSRIGWVT 1019 (1033)
Q Consensus 949 ~e~l~~E~e~LGf~lS~HPl~~~~~~l~~~~~~~~~~~~---------~~~~g~~v~iaG~V~~i~~~~TKkG~~maflt 1019 (1033)
T Consensus 944 ~e~L~~Eke~lG~ylS~HPl~~y~~~l~~~~~~~~~~l~~~~~~~~~~~~~~g~~V~vaG~i~~~k~~~TkkG~~maf~t 1023 (1157)
T PRK06826 944 KELLAMEKEMLGLYISGHPLEEYEELLKKQTSHKIADIISSEELEGNSELKDGDRVIVGGIITEVKRKVTRNNDMMAFIT 1023 (1157)
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEEEE
T ss_conf 89999989872017661718899999987178339997520011110136899889999999887753179999789999
Q ss_pred EECCCCEEEEEECC
Q ss_conf 98497049999539
Q 537021.9.peg.7 1020 FSEPAKEYEANFFP 1033 (1033)
Q Consensus 1020 leD~~g~~e~~iFP 1033 (1033)
T Consensus 1024 leD~tG~~e~vvFp 1037 (1157)
T PRK06826 1024 LEDLYGTIEVIVFP 1037 (1157)
T ss_pred EEECCCCEEEEECH
T ss_conf 99689868999988