HHsearch alignment for GI: peg_753 and conserved domain: PRK07373

>PRK07373 DNA polymerase III subunit alpha; Reviewed.
Probab=100.00  E-value=0  Score=628.36  Aligned_cols=276  Identities=30%  Similarity=0.524  Sum_probs=261.7

Q ss_pred             HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEEEE
Q ss_conf             00133101478889999999999730266677751002354202589998888636850355233421003531986985
Q 537021.9.peg.7  758 DYGFNKSHAAAYAVISYQTAWMKTHYPVEFLAASMTLEMDNVEKIKKFCQDARQFNIQIMPPSVNTPCVDFKVGDNRIYY  837 (1033)
Q Consensus       758 ~Y~FnksHa~aya~~~y~~aylK~~yP~eF~aa~L~~~~~~~~~~~~~i~e~~~~gi~vl~PdIN~S~~~f~~~~~~Ir~  837 (1033)
T Consensus        35 ~~~FNKSHsaAYaliaYqtAyLKahYP~eFmAA~Lss~~~n~dKi~~~i~e~r~~gI~vlpPdIN~S~~~F~~~~~~Irf  114 (447)
T PRK07373         35 SNCFNKSHSTAYAYVTYQTAYLKANYPVEYMAALLTANSGDQDKVQKYIENCQKMGIEVEPPDINRSGVDFTPVGDKILF  114 (447)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCEECCCEEEE
T ss_conf             07778789999999999999987438499999970478788468999999999879919898111467862898984998


Q ss_pred             EHHHHCCCCHHHHHHHHHHH-HCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             02685896989999999998-37999997899973482479989999888676723479038999998999999999886
Q 537021.9.peg.7  838 SLAAIKGVGTTTARHIMEAS-ADKPFDSLEDFCSRVDSKKLNRRVLESLVFAGALDCFGYSRMQLLQSLDNIQKYAQWVE  916 (1033)
Q Consensus       838 Gl~~Ikgvg~~~~~~Ive~r-~~g~f~sl~df~~rv~~~~~nk~~le~Li~aGAfD~~~~~R~~ll~~i~~~~~~~~~~~  916 (1033)
T Consensus       115 GL~AIKgVG~~ai~~Iv~eR~~~G~F~sl~DF~~Rvd~~~vNkr~lEsLIkaGAfD~~g~nRa~Ll~~ld~al~~a~~~~  194 (447)
T PRK07373        115 GLSAVRNLGEGAIEAILKAREEGGEFKSLADFCDRVDLRVVNRRALESLIYCGAFDKIEANRHQLIKDLELVIDWAQSRA  194 (447)
T ss_pred             EHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             73774487599999999999866997669999975452214999999999708464433419999997999999999988


Q ss_pred             HHHHCCCCCCCCCCC--------CCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEECCCCHHHHHHHHHHCCCCCHHHHHC
Q ss_conf             543127778666655--------556557766689999888999857887262116385589999998748976889850
Q 537021.9.peg.7  917 KNRTNKHENIFAHEK--------GTFSDKITLEKFSVENSSVRFENEQRVLGFYFSGHPLDVYKPILRKMGIKGYEESVA  988 (1033)
Q Consensus       917 ~~~~~~q~~LF~~~~--------~~~~~~~~~~~~~~~~~~e~l~~E~e~LGf~lS~HPl~~~~~~l~~~~~~~~~~~~~  988 (1033)
T Consensus       195 ~~~~~gQ~~LF~~~~~~~~~~~~~~~~~~p~~~~v~ew~~~ekL~~EKE~LGfYlSgHPL~~y~~~~~~~~~~~~~~l~~  274 (447)
T PRK07373        195 KDRASGQLNLFDLLGSTSNGDANSAFDTAPKAPPVADFPLQEKLKLEKELLGFYVSEHPLKSLQRPAPLLSPINLSQLEE  274 (447)
T ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCHHHHHH
T ss_conf             99875984522223556555443222246778876679988899877887506862073789999988838713899640


Q ss_pred             CCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEECC
Q ss_conf             558988999999961121015888769999998497049999539
Q 537021.9.peg.7  989 TIRGNNIRLAAMVVSKQQKKTRKGSRIGWVTFSEPAKEYEANFFP 1033 (1033)
Q Consensus       989 ~~~g~~v~iaG~V~~i~~~~TKkG~~mafltleD~~g~~e~~iFP 1033 (1033)
T Consensus       275 ~~~~~~V~~~g~I~~vr~~~TKkG~~MAfvtLeD~tG~iEvvvFp  319 (447)
T PRK07373        275 QKERTKVSAVVMLNGVKKIVTKKGDPMAFLQLEDLSGQSEAVVFP  319 (447)
T ss_pred             CCCCCEEEEEEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEEEH
T ss_conf             248978999999999999870489659999999789748999808