HHsearch alignment for GI: peg_753 and conserved domain: PRK09532
>PRK09532 DNA polymerase III subunit alpha; Reviewed.
Probab=100.00 E-value=0 Score=2002.77 Aligned_cols=798 Identities=39% Similarity=0.649 Sum_probs=754.8
Q ss_pred CCHHHHHHCHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCC
Q ss_conf 81334331444764432998999999997899889981165177499999999976996389999998547664334456
Q 537021.9.peg.7 10 SFVHLQVHSSYSLLEGALSLNNILDKIAADQQPAIAITDTNNLFSALEFSQKACAAGIQPIIGCQLDIDMQDNLKMTNQG 89 (1033)
Q Consensus 10 ~FvhLh~hS~ySlldg~~~~e~LV~~A~~~G~~AiAITD~~nl~Gav~F~~ackk~gIKPIiG~E~~v~~~~~~~~~~~~ 89 (1033)
T Consensus 2 sFvhLh~hS~yS~L~Ga~~~~eLv~~A~elG~~AlALTD~~~l~Gav~F~~a~~~~gIkPIiG~el~v~~~~~~~~---- 77 (874)
T PRK09532 2 SFVGLHIHSDYSLLDGASQLPALIDRAIELGMPAIALTDHGVMYGAIELLKVCRNKGIKPIIGNEMYVINGDIEKQ---- 77 (874)
T ss_pred CCCCCCCCCCCCHHCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCC----
T ss_conf 2215254663723063619999999999849999988508968899999999997799864562899717874444----
Q ss_pred CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCC----CCCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCHH
Q ss_conf 56666775399995696899999999989973248----77874007899986348988998197679678888779978
Q 537021.9.peg.7 90 KTPFPTVPSIVLLVSTAEGYQRLIELVSRMYLLDQ----GKQSVRICLSWLQEIGTEGLIMLTGGSSGPIDRAFFFNSSQ 165 (1033)
Q Consensus 90 ~~~~~~~~~lvlLAkN~~Gy~nL~kL~S~a~~~~~----~~~~p~i~~~~L~e~~~egLIvlsg~~~g~i~~~l~~~~~~ 165 (1033)
T Consensus 78 --~~~~~~hlvLLAkN~~GY~NL~kL~S~a~l~g~~~k~~~~~P~id~e~L~~-~~egLI~ls~cl~gev~~~ll~~~~~ 154 (874)
T PRK09532 78 --KRHRKYHQVVLAKNTQGYKNLVKLTTISHLQGFQGKGIFARPCINKELLEQ-YHEGLIVTSACLGGEIPQAILAGRPD 154 (874)
T ss_pred --CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH-CCCCEEEECCCCCCHHHHHHHCCCHH
T ss_conf --556677779972887999999999999987143578650577589999985-47994994587666277998679999
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCHHHH-HHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999999987659868999943991158-99999999999818989980883007878899998766884698576531
Q 537021.9.peg.7 166 VAEKRLLTFKKLFGDRLYVNLQRHRGYDR-YRESQVVQLAYTHELPLVATNNSLFLSEEDYEAHDVLMAVAHSTVVSQKD 244 (1033)
Q Consensus 166 ~a~~~l~~l~~~Fgd~~ylEl~~~~~~e~-~~~~~l~~lA~~~~iPlVaTndv~Y~~~~D~~~h~iL~aI~~~~~l~~~~ 244 (1033)
T Consensus 155 ~a~~~~~~~~~iFg~~~ylEiq~hg~~~~~~~n~~L~~lA~~~~iplVATndvhY~~~~D~~~~dvL~cI~~g~~l~~~~ 234 (874)
T PRK09532 155 AARKVAKWYKDLFGDDFYLEIQDHGSQEDRIVNVEIVKIARELGIKIVATNDSHFISCYDVEAHDALLCIQTGKLITEDK 234 (874)
T ss_pred HHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEECCCCEECCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999998648878999974898588999999999999819998861865015754536999998886098644212
Q ss_pred CCCCCCCCCCCCHHHHHHHCCH------HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 0024534323434788751220------3589987886411100013322102345557568877689889998765410
Q 537021.9.peg.7 245 RPRVTPDHYLKNRSEMVSIFSD------LPEALENTVEIARRCSFILQVHAPILPRFIEKECDDIQKEEENELRNKAVAG 318 (1033)
Q Consensus 245 ~~~~~~~~yLks~eEM~~~f~~------~peAi~NT~~IAe~c~~~l~~~~~~lP~f~~p~~~~~~~~~~~~Lr~l~~~G 318 (1033)
T Consensus 235 r~~~~~~~ylks~~EM~~lF~d~~~~~~~~eAl~NT~~IA~~c~~~~~~~~~~lP~f~~p~g----~t~~~~L~~l~~~G 310 (874)
T PRK09532 235 RLRYSGTEYLKSAEEMRLLFRDHLPDDVIAEAIANTLEVADKIEPYNILGEPRIPNYPVPSG----HTADTYVEEVAWQG 310 (874)
T ss_pred CCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC----CCHHHHHHHHHHHH
T ss_conf 23688878688999999987641441348999997899998710013128866888778789----98689999999975
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH
Q ss_conf 34201246432457838999998877898986063055788899999851047643344442046677655440375633
Q 537021.9.peg.7 319 LEVRLAQGAIAKGYHAQDYRQRLDFELNVIARMKFSGYFLIVADFIQWAKKNNIPVGPGRGSGAGSVTAYALTITDIDPL 398 (1033)
Q Consensus 319 l~~R~~~~~~~~~~~~~~y~~RLe~EL~vI~~~gf~~YFLiV~Div~~ak~~gI~vGpGRGSAagSLVaY~LgIT~VDPi 398 (1033)
T Consensus 311 l~~R~~~~~--~~~~~~~y~~RL~~EL~vI~~mgf~~YFLIV~D~v~~Ar~~gI~vGpGRGSaAGSLVaY~LgIT~VDPi 388 (874)
T PRK09532 311 LLERLKCKS--RAEVEPVYKERLEYELKMLQQMGFSTYFLVVWDYIKYARDNNIPVGPGRGSAAGSLVAYCLGITNIDPV 388 (874)
T ss_pred HHHHCCCCC--CCCCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 998706555--334779999999999999985487754149999999999769711578761143499997068767824
Q ss_pred HCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 32310567621001457875333656878999999983038021554220778778899999997527998898865431
Q 537021.9.peg.7 399 RFSLLFERFLNPDRMSMPDFDIDFCQDRRDEVIRYVQNKYGHERVAQIITFGSLQAKAALRDVGRALQMPYSQVDRLCKL 478 (1033)
Q Consensus 399 ~~~LlFERFLnp~R~~~PDIDiDf~~~~R~~vi~y~~~kyG~~~va~i~t~~t~~~k~aird~~r~~g~~~~~~~~~~~~ 478 (1033)
T Consensus 389 ~~~LLFERFLNpeR~smPDIDiDF~~~rReeVI~Yv~~KYG~~~VAqI~Tf~t~~ak~aiRDvgRvlg~p~~~~d~lak~ 468 (874)
T PRK09532 389 HHGLLFERFLNPERKSMPDIDTDFCIERRDEMIKYVTEKYGEDRVAQIITFNRMTSKAVLKDVARVLDIPYGEADKMAKL 468 (874)
T ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf 26755220378877889998751770029999999997858577899985234243689999999849988899999963
Q ss_pred CCCCCCCCCCHHHH----HCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHEECCCCCCCCCE
Q ss_conf 01458982443445----22988788643074202688987201122100244744033525666662001236768866
Q 537021.9.peg.7 479 IPNDPAHPVSLQAI----ADDSRFREARLADPSVDRLLEISQKLEGLYRHASTHAAGIVIGDRPLSQLVPMYRDVRSDLP 554 (1033)
Q Consensus 479 i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~a~~leg~~r~~~~Ha~Gvvi~~~~l~~~~p~~~~~~~~~~ 554 (1033)
T Consensus 469 ip~~~g~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~a~~LeGlpR~~s~HAaGvVIs~~pL~~~vPl~~~~-~g~~ 547 (874)
T PRK09532 469 IPVSRGKPTKLKVMISDETPEPEFKEKYDNDPRVRRWLDMAIRIEGTNKTFGVHAAGVVISSEPLDEIVPLQKNN-DGAV 547 (874)
T ss_pred CCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEECC-CCCE
T ss_conf 874468852377875225759899976415899999999999883474420025660585277744226624779-8981
Q ss_pred EEEEECHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHH-HCCCCCCCCCCCCH-------------------HHHHHHHHC
Q ss_conf 8851021334311232135654178999999998874-02543433234435-------------------889987620
Q 537021.9.peg.7 555 VTQFNMKWIEKAGLIKFDFLGLKTLTLLQKSLDFLAQ-RGVKVDLSLIPFDD-------------------HETYHLLTT 614 (1033)
Q Consensus 555 ~~q~d~~~~e~~gl~K~D~Lgl~~L~~i~~~~~~i~~-~~~~~d~~~ip~~D-------------------~~~~~l~~~ 614 (1033)
T Consensus 548 vtQ~d~~d~E~~GLlK~D~LGL~~Lt~I~~a~~lI~~~~g~~~dl~~ip~dD~~~~~~~~~~~~~~ip~dd~~t~~ll~~ 627 (874)
T PRK09532 548 ITQYFMEDLESLGLLKMDFLGLKNLTMIQKTADLIKENRGQRIDLDQLPLDERKALEIIAKGEAKKLPKDVQKTHQLLER 627 (874)
T ss_pred EEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHC
T ss_conf 36615765998499643720557688999999999983189878532885421121012333211367650899999863
Q ss_pred CCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHH--HHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHH
Q ss_conf 1410122114534788887717404888876654114113420--03688850465785026966733410335530012
Q 537021.9.peg.7 615 KGTLGIFQLESSGMRQALEGMQPDCIEDIIALVSLYRPGPIDN--IVVYNNRKNGKEKIVSIHPLIDPMLKETQGVIIYQ 692 (1033)
Q Consensus 615 g~t~GvFQ~es~~~~~~l~~~~p~~~~dl~~~~al~RPGp~~~--~~~yi~rk~g~e~~~~~hp~l~~iL~~T~Gv~vyQ 692 (1033)
T Consensus 628 g~T~GvFQ~ES~gm~~~l~~lkP~~f~Dlva~~ALyRPGP~~~gmi~~yi~rk~g~e~v~y~hp~Le~IL~~TyGV~vYQ 707 (874)
T PRK09532 628 GDLEGIFQLESSGMKQIVRDLKPSNIEDISSILALYRPGPLDAGLIPKFINRKHGREPIDYQHQLLEPILNETYGVLVYQ 707 (874)
T ss_pred CCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEH
T ss_conf 88558998568899999997699979998999874277877778548999851899888889978998744578756549
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 56898878863268413078897620121101677878999998624999999999999999750001331014788899
Q 537021.9.peg.7 693 EQVMQIAQLLSGYSLSEADVLRRAMGKKIKEEMDKQKERFISGASKNGISKTIAVNIFELLAKFADYGFNKSHAAAYAVI 772 (1033)
Q Consensus 693 EQvm~ia~~~ag~~~~ead~lRra~~kk~~~~~~~~~~~f~~g~~~~g~~~~~a~~i~~~i~~f~~Y~FnksHa~aya~~ 772 (1033)
T Consensus 708 EQVMqia~~~AGfslgeAD~LRRAm~KK~~~~m~~~r~~Fi~ga~~~G~~~~~a~~if~~i~~Fa~Y~~--s~~~~~~~~ 785 (874)
T PRK09532 708 EQIMKMAQDLAGYSLGEADLLRRAMGKKKISEMQKHREKFIDGAAKNGVPKKIAENLFDQMVKFAEYCL--SYDTEVLTV 785 (874)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHH--HHHHHHHHH
T ss_conf 999999999978992899999998727988999999999999999869999999999999998736199--999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 999999997302666777510023542025899988886368503552334
Q 537021.9.peg.7 773 SYQTAWMKTHYPVEFLAASMTLEMDNVEKIKKFCQDARQFNIQIMPPSVNT 823 (1033)
Q Consensus 773 ~y~~aylK~~yP~eF~aa~L~~~~~~~~~~~~~i~e~~~~gi~vl~PdIN~ 823 (1033)
T Consensus 786 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (874)
T PRK09532 786 EYGPLPIGKIVEENIECTVYSVDPNGFVYTQPIAQWHQRGEQEVFEYELED 836 (874)
T ss_pred HHHHHHHHHHCCHHHEEEECCCCCCCEECCCHHHHHHHHCCEEEEEEECCC
T ss_conf 753677632141322332224578862035333678871870489876158