HHsearch alignment for GI: peg_753 and conserved domain: cd04492
>cd04492 YhaM_OBF_like YhaM_OBF_like: A subfamily of OB folds similar to that found in Bacillus subtilis YhaM and Staphylococcus aureus cmp-binding factor-1 (SaCBF1). Both these proteins are 3'-to-5'exoribonucleases. YhaM requires Mn2+ or Co2+ for activity and is inactive in the presence of Mg2+. YhaM also has a Mn2+ dependent 3'-to-5'single-stranded DNA exonuclease activity. SaCBF is also a double-stranded DNA binding protein, binding specifically to cmp, the replication enhancer found in S. aureus plasmid pT181. Proteins in this group combine an N-terminal OB fold with a C-terminal HD domain. The HD domain is found in metal-dependent phosphohydrolases.
Probab=93.97 E-value=0.094 Score=33.32 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=31.5
Q ss_pred EEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEC
Q ss_conf 9996112101588876999999849704999953
Q 537021.9.peg.7 999 AMVVSKQQKKTRKGSRIGWVTFSEPAKEYEANFF 1032 (1033)
Q Consensus 999 G~V~~i~~~~TKkG~~mafltleD~~g~~e~~iF 1032 (1033)
T Consensus 4 fli~~~~~~~tk~G~~Yl~l~L~D~tG~I~ak~W 37 (83)
T cd04492 4 FLIKSKELRTAKNGKPYLALTLQDKTGEIEAKLW 37 (83)
T ss_pred EEEEEHHHHCCCCCCCEEEEEEECCCCEEEEEEC
T ss_conf 9999801000579991789999878876888885