HHsearch results for GI: peg_753 and protein with PDBid: 3bz1_U
>3bz1_U Photosystem II 12 kDa extrinsic protein; electron transport photosystem, membrane complex, transmembrane alpha-helix; HET: CLA PHO HEM PL9 BCR DGD LHG SQD LMG LMT; 2.90A {Thermosynechococcus elongatus} PDB: 2axt_U* 3bz2_U* 3kzi_U* 3a0b_U* 3a0h_U*
Probab=93.32 E-value=0.066 Score=32.82 Aligned_cols=54 Identities=22% Similarity=0.295 Sum_probs=41.7
Q ss_pred CCCCCCCCEEEEECCCEEEEEHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 5523342100353198698502685896989999999998379999978999734824799899998886
Q 537021.9.peg.7 818 PPSVNTPCVDFKVGDNRIYYSLAAIKGVGTTTARHIMEASADKPFDSLEDFCSRVDSKKLNRRVLESLVF 887 (1033)
Q Consensus 818 ~PdIN~S~~~f~~~~~~Ir~Gl~~Ikgvg~~~~~~Ive~r~~g~f~sl~df~~rv~~~~~nk~~le~Li~ 887 (1033)
+.|||... ..-|..|+|||...+++||+ +|||+|++|+... +++..+.++.+-.
T Consensus 24 kidlN~As----------~~eL~~lpGig~~~A~~Iv~---~gpf~s~~dL~~V---~Gig~~~~e~ik~ 77 (104)
T 3bz1_U 24 KIDLNNTN----------IAAFIQYRGLYPTLAKLIVK---NAPYESVEDVLNI---PGLTERQKQILRE 77 (104)
T ss_dssp BEETTSSC----------GGGGGGSTTTTHHHHHHHHH---SCCCSSGGGGGGC---TTCCHHHHHHHHH
T ss_pred CEECCCCC----------HHHHHHCCCCCHHHHHHHHH---CCCCCCHHHHHCC---CCCCHHHHHHHHH
T ss_conf 35784089----------99996589979999999997---4997989999638---9989999999998