BLAST/PSIBLAST alignment of GI: peg_753 and GI: 15888619 at iteration 1
>gi|15888619|ref|NP_354300.1| DNA polymerase III subunit alpha [Agrobacterium tumefaciens str. C58] Length = 1167
>gi|15156343|gb|AAK87085.1| DNA polymerase III, alpha chain [Agrobacterium tumefaciens str. C58] Length = 1167
Score = 1343 bits (3477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/1033 (62%), Positives = 803/1033 (77%), Gaps = 7/1033 (0%)
Query: 7 KSPSFVHLQVHSSYSLLEGALSLNNILDKIAADQQPAIAITDTNNLFSALEFSQKACAAG 66
K+P FVHL+VHS+YSLLEGAL L I+ K D QPAIAITDTNNLF ALEFS+KA G
Sbjct: 16 KTPGFVHLRVHSAYSLLEGALPLKKIMSKAVGDGQPAIAITDTNNLFVALEFSEKARDEG 75
Query: 67 IQPIIGCQLDIDMQDNLKMTNQGKTPFPTVPSIVLLVSTAEGYQRLIELVSRMYLLDQG- 125
+QPIIGCQL IDMQD + + +P+IVLL + AEGY+RL++LVSR YL +G
Sbjct: 76 LQPIIGCQLSIDMQDAAEDRRNHNSHLQKLPAIVLLAANAEGYERLVDLVSRAYLDGEGG 135
Query: 126 KQSVRICLSWLQEIGTEGLIMLTGGSSGPIDRAFFFNSSQVAEKRLLTFKKLFGDRLYVN 185
SV I +WL+E GLI LTG S GP+D A + A++RLLT K LFGDRLY+
Sbjct: 136 SHSVHITRAWLEEASNAGLIALTGASGGPVDMALKEGHAAQAKERLLTLKSLFGDRLYIE 195
Query: 186 LQRHRGYDRYRESQVVQLAYTHELPLVATNNSLFLSEEDYEAHDVLMAVAHSTVVSQKDR 245
LQR GYDR E +++ LAY H++PLVATN + F S+ DYEAHD LMAVAH+ +VS R
Sbjct: 196 LQRQSGYDRSHERRLIGLAYEHDIPLVATNEAFFPSKADYEAHDALMAVAHNAIVSDDSR 255
Query: 246 PRVTPDHYLKNRSEMVSIFSDLPEALENTVEIARRCSFILQVHAPILPRFIEKECD--DI 303
R+TPDHYLK+R EM ++F+DLPEALENTVEIA RCS++L+ PILPRF D
Sbjct: 256 FRLTPDHYLKSRDEMTALFADLPEALENTVEIALRCSYVLKKRGPILPRFTGASDDPEAA 315
Query: 304 QKEEENELRNKAVAGLEVRLAQGAIAKGYHAQDYRQRLDFELNVIARMKFSGYFLIVADF 363
++ E ELR +AV GL+ RL+ +A GY QDYR+RLDFEL VI+RMKF GYFLIVADF
Sbjct: 316 ERAETEELRRQAVEGLDQRLSALGMAPGYTEQDYRERLDFELGVISRMKFPGYFLIVADF 375
Query: 364 IQWAKKNNIPVGPGRGSGAGSVTAYALTITDIDPLRFSLLFERFLNPDRMSMPDFDIDFC 423
I+WAK+ +IPVGPGRGSGAGS+ AYALTITD+DPLRFSLLFERFLNP+R+SMPDFDIDFC
Sbjct: 376 IKWAKQQDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPERVSMPDFDIDFC 435
Query: 424 QDRRDEVIRYVQNKYGHERVAQIITFGSLQAKAALRDVGRALQMPYSQVDRLCKLIPNDP 483
QDRR+EVIRYVQ KYG E+VAQIITFGSLQA+AALRDVGR L+MPY QVD++CKL+PN+P
Sbjct: 436 QDRREEVIRYVQRKYGREQVAQIITFGSLQARAALRDVGRVLEMPYGQVDKICKLVPNNP 495
Query: 484 AHPVSL-QAIADDSRFREARLADPSVDRLLEISQKLEGLYRHASTHAAGIVIGDRPLSQL 542
A+P L +AI ++ R +E +P V RLL+I+QK+EGLYRHASTHAAGIVIGDRPLS+L
Sbjct: 496 ANPTPLSKAIEEEPRLQEEADKEPVVARLLDIAQKIEGLYRHASTHAAGIVIGDRPLSKL 555
Query: 543 VPMYRDVRSDLPVTQFNMKWIEKAGLIKFDFLGLKTLTLLQKSLDFLAQRGVKVDLSLIP 602
VPMYRD RSD+PVTQFNMKW+E AGL+KFDFLGLKTLT+L+ ++DF+A+RG+KVDL+ IP
Sbjct: 556 VPMYRDPRSDMPVTQFNMKWVESAGLVKFDFLGLKTLTVLKVAVDFVAKRGIKVDLAAIP 615
Query: 603 FDDHETYHLLTTKGTLGIFQLESSGMRQALEGMQPDCIEDIIALVSLYRPGPIDNIVVYN 662
+D +TY +L+ T+G+FQ+ES+GMR+AL GM+PDCIEDIIALV+LYRPGP++NI VYN
Sbjct: 616 LEDAKTYEMLSRGETIGVFQVESAGMRKALIGMRPDCIEDIIALVALYRPGPMENIPVYN 675
Query: 663 NRKNGKEKIVSIHPLIDPMLKETQGVIIYQEQVMQIAQLLSGYSLSEADVLRRAMGKKIK 722
RK+G+E++ SIHP ID +LKETQGVI+YQEQVMQIAQ+LSGYSL EAD+LRRAMGKKIK
Sbjct: 676 ARKHGEEELESIHPTIDHLLKETQGVIVYQEQVMQIAQVLSGYSLGEADLLRRAMGKKIK 735
Query: 723 EEMDKQKERFISGASKNGISKTIAVNIFELLAKFADYGFNKSHAAAYAVISYQTAWMKTH 782
EEMD+Q+ERF+ GA KNG+SK A IF+LLAKFA+YGFNKSHAAAYA++SYQTA+MK H
Sbjct: 736 EEMDQQRERFVDGAIKNGVSKPQANTIFDLLAKFANYGFNKSHAAAYAIVSYQTAYMKAH 795
Query: 783 YPVEFLAASMTLEMDNVEKIKKFCQDARQFNIQIMPPSVNTPCVDFKVGDNRIYYSLAAI 842
YPVEFLAASMTL+M N EK+ F QDA + I+++ PSV T F+ G+NRIYYSLAAI
Sbjct: 796 YPVEFLAASMTLDMANTEKLNDFRQDAGRLGIEVVAPSVQTSFRQFETGENRIYYSLAAI 855
Query: 843 KGVGTTTARHIMEASADKPFDSLEDFCSRVDSKKLNRRVLESLVFAGALDCFGYSRMQLL 902
KGVG HI++ +KPF SLEDFC R+D K++NRRVLESL+ AGA DCFG R +L+
Sbjct: 856 KGVGEGAVEHIVQVRGEKPFTSLEDFCLRIDPKQINRRVLESLINAGAFDCFGRDRAELI 915
Query: 903 QSLDNIQKYAQWVEKNRTNKHENIFAHEKGTFSDKITLEKFSVENSSVRFENEQRVLGFY 962
LD I YAQ + NRT ++F GT +K+ L F S + E +VLGFY
Sbjct: 916 GGLDRIIGYAQMAQNNRTIGQSDMFGSGGGTGPEKLILPAFQSWLPSEKLIREYQVLGFY 975
Query: 963 FSGHPLDVYKPILRKMGIKGYEE-SVATIRGNNI--RLAAMVVSKQQKKTRKGSRIGWVT 1019
+ HPLD Y+P+L K+ ++ + + S A +G + RLA V KQ++KTR G+++G VT
Sbjct: 976 LTAHPLDTYRPLLEKLRVQNFADFSAAVKQGASTVGRLAGTVTGKQERKTRTGNKMGIVT 1035
Query: 1020 FSEPAKEYEANFF 1032
FS+ + +YEA F
Sbjct: 1036 FSDASGQYEAVLF 1048