HHsearch alignment for GI: peg_754 and conserved domain: PRK05673
>PRK05673 dnaE DNA polymerase III subunit alpha; Validated.
Probab=99.35 E-value=5e-11 Score=89.39 Aligned_cols=146 Identities=18% Similarity=0.206 Sum_probs=121.9
Q ss_pred CCCHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEE
Q ss_conf 87110028667614898501344333235553102787522105899999878752499828999841001677764269
Q 537021.9.peg.7 10 NNRKGKKKPDGNHDFLFLEDCYDHAIEMKLQEAEEDPNFLSLQEQQQLEEEKPRLLREKKPYIIVVSQEDKLSLQRDSIR 89 (184)
Q Consensus 10 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~LLe~gkpvii~VsAe~rle~eg~~LR 89 (184)
T Consensus 989 ~~~~~~~TkkG~~-maf------------~tleD~tg~~e~vvfp~~~~~~~-~~l~~~~~~~v~G~v~~~--~~~~~l~ 1052 (1143)
T PRK05673 989 VSVRVRVTKRGNK-MAI------------VTLEDRSGRIEVMLFSEALEEYR-DLLEEDRIVVVKGQVSFD--DFGLRLT 1052 (1143)
T ss_pred EEEEECCCCCCCE-EEE------------EEEEECCCCEEEEECHHHHHHHH-HHHCCCCEEEEEEEEEEE--CCEEEEE
T ss_conf 8978511799898-999------------99998998489999799999999-985269879999999960--9868999
Q ss_pred EEECCCHHHHHHHHCCCEEEEEECCCH----HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECC-CCCC--CH
Q ss_conf 865041589997320110999738015----7899999611221037888713999974898547999668-9707--89
Q 537021.9.peg.7 90 LLWVESLEKKSMEMLDSLRVYLQDRSP----LREIHKYFENRQTQNYDKQGKIGLIFLRSQGKIEIEITLD-HYPI--SP 162 (184)
Q Consensus 90 i~~vepLD~aAa~~~kgLRIfVrD~~p----L~sI~s~Le~~~~~~~~G~G~V~Lvli~~~~~~EVEI~Lp-~f~V--SP 162 (184)
T Consensus 1053 ~~~i~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~l~~-----~~G~~~v~l~~~~~--~~~~~~~l~~~~~v~~~~ 1125 (1143)
T PRK05673 1053 AREVMDLDEAREKYARPLRISLDDRQLTDQLLERLKQVLEP-----GPGTVPVHLYYQDG--DAEAELRLGDRWRVSPSD 1125 (1143)
T ss_pred EEECCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH-----CCCCCEEEEEEECC--CEEEEEECCCCCEECCCH
T ss_conf 99740489998625871799970354798999999999970-----98998699999769--827999869985277799
Q ss_pred HHHHHHHHCCCHHEHH
Q ss_conf 8999874064621110
Q 537021.9.peg.7 163 EIAFDLEHITGITKVV 178 (184)
Q Consensus 163 qIagALKsIpGVl~Ve 178 (184)
T Consensus 1126 ~l~~~l~~l~G~~nv~ 1141 (1143)
T PRK05673 1126 ELLGDLKALLGVECVE 1141 (1143)
T ss_pred HHHHHHHHHHCCCCEE
T ss_conf 9999999850976589