Query 537021.9.peg.759_1 Match_columns 58 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Wed May 25 03:31:16 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_759.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1lnsa2 b.18.1.13 (A:551-763) 12.9 14 0.00099 17.3 -0.9 13 31-43 18-30 (213) 2 d2nysa1 b.136.1.2 (A:3-119) Un 6.0 62 0.0045 14.0 0.2 33 10-42 24-63 (117) 3 d1v0aa1 b.18.1.30 (A:4-170) En 5.2 1.1E+02 0.0079 12.7 1.1 12 16-27 107-118 (167) 4 d1rwsa_ d.15.3.2 (A:) Hypothet 4.6 71 0.0052 13.7 -0.2 14 8-21 7-20 (68) 5 d1bg1a2 b.2.5.5 (A:322-575) ST 3.8 1.2E+02 0.0089 12.5 0.5 13 37-49 111-123 (254) 6 d1nvpc_ b.56.1.1 (C:) Large ch 3.5 1.1E+02 0.0082 12.7 0.0 10 10-19 38-47 (47) 7 d1bf5a2 b.2.5.5 (A:317-568) ST 3.3 1.5E+02 0.011 12.1 0.5 13 37-49 110-122 (252) 8 d1tkea2 d.67.1.1 (A:63-224) Th 3.1 77 0.0056 13.5 -1.1 15 37-51 25-39 (162) 9 d2je8a4 b.18.1.5 (A:28-219) Be 3.0 1.8E+02 0.013 11.7 0.7 8 19-26 183-190 (192) 10 d1j5wa_ d.104.1.1 (A:) Glycyl- 3.0 1.9E+02 0.014 11.5 2.1 21 12-32 41-61 (281) No 1 >d1lnsa2 b.18.1.13 (A:551-763) X-Prolyl dipeptidyl aminopeptidase PepX {Lactococcus lactis [TaxId: 1358]} Probab=12.88 E-value=14 Score=17.28 Aligned_cols=13 Identities=46% Similarity=0.925 Sum_probs=6.3 Q ss_pred CHHHCCCCCCEEE Q ss_conf 2010039863279 Q 537021.9.peg.7 31 TDFKNHYPDEKFA 43 (58) Q Consensus 31 tdfknhypdekfa 43 (58) +.|.|||+++.|+ T Consensus 18 ~~~~~~~~~~~f~ 30 (213) T d1lnsa2 18 AQFDNNYDDETFK 30 (213) T ss_dssp EEEESCCCHHHHH T ss_pred EECCCCCCHHHHH T ss_conf 7320249989998 No 2 >d2nysa1 b.136.1.2 (A:3-119) Uncharacterized protein AGR_C_3712p {Agrobacterium tumefaciens [TaxId: 358]} Probab=5.97 E-value=62 Score=13.96 Aligned_cols=33 Identities=18% Similarity=0.346 Sum_probs=23.4 Q ss_pred EECCCCCEEE-EEEEEEECCC------CCHHHCCCCCCEE Q ss_conf 1010574246-6899995588------5201003986327 Q 537021.9.peg.7 10 IRRTTGEIEW-QEVYIEFSPT------PTDFKNHYPDEKF 42 (58) Q Consensus 10 irrttgeiew-qevyiefspt------ptdfknhypdekf 42 (58) .-...|.+.+ ...||.|... |...+..||+|-- T Consensus 24 ~v~~~G~Lpg~hHfyITF~T~~~gV~ip~~L~~~YPeEMT 63 (117) T d2nysa1 24 EVAATGRLPGDHHFFITFLTGAPGVRISQHLKSKYAEQMT 63 (117) T ss_dssp HHHHHSSCCTTCCEEEEEESSSTTCBCCHHHHHHSSSEEE T ss_pred HHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCE T ss_conf 9997497999848999997499996789999961987159 No 3 >d1v0aa1 b.18.1.30 (A:4-170) Endoglucanase H {Clostridium thermocellum [TaxId: 1515]} Probab=5.19 E-value=1.1e+02 Score=12.74 Aligned_cols=12 Identities=33% Similarity=0.828 Sum_probs=9.3 Q ss_pred CEEEEEEEEEEC Q ss_conf 424668999955 Q 537021.9.peg.7 16 EIEWQEVYIEFS 27 (58) Q Consensus 16 eiewqevyiefs 27 (58) .-+||+|.|.|+ T Consensus 107 ~~~W~~V~IPF~ 118 (167) T d1v0aa1 107 DSSWKTIEIPFS 118 (167) T ss_dssp CSSCEEEEEEGG T ss_pred CCCCEEEEEEHH T ss_conf 896599998889 No 4 >d1rwsa_ d.15.3.2 (A:) Hypothetical protein PF1061 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Probab=4.56 E-value=71 Score=13.68 Aligned_cols=14 Identities=43% Similarity=0.805 Sum_probs=10.0 Q ss_pred HHEECCCCCEEEEE Q ss_conf 01101057424668 Q 537021.9.peg.7 8 LLIRRTTGEIEWQE 21 (58) Q Consensus 8 llirrttgeiewqe 21 (58) ++.|..-.||||++ T Consensus 7 v~~r~~~reiE~~~ 20 (68) T d1rwsa_ 7 VIGRNIEKEIEWRE 20 (68) T ss_dssp STTCCCCCCCCCCS T ss_pred EECCCCEEEEEECC T ss_conf 96588505888338 No 5 >d1bg1a2 b.2.5.5 (A:322-575) STAT3b {Mouse (Mus musculus) [TaxId: 10090]} Probab=3.79 E-value=1.2e+02 Score=12.49 Aligned_cols=13 Identities=31% Similarity=0.309 Sum_probs=9.9 Q ss_pred CCCCEEEEEEECH Q ss_conf 9863279999944 Q 537021.9.peg.7 37 YPDEKFAIFFLNE 49 (58) Q Consensus 37 ypdekfaifflne 49 (58) --||||+|+|--+ T Consensus 111 VtEEk~~l~F~t~ 123 (254) T d1bg1a2 111 VTEELHLITFETE 123 (254) T ss_dssp GGGCCBCEEEEEE T ss_pred EHHHEEEEEEEEE T ss_conf 0030102678889 No 6 >d1nvpc_ b.56.1.1 (C:) Large chain TOA1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Probab=3.45 E-value=1.1e+02 Score=12.67 Aligned_cols=10 Identities=30% Similarity=0.993 Sum_probs=4.9 Q ss_pred EECCCCCEEE Q ss_conf 1010574246 Q 537021.9.peg.7 10 IRRTTGEIEW 19 (58) Q Consensus 10 irrttgeiew 19 (58) ..+.+||.|| T Consensus 38 F~ka~gE~eW 47 (47) T d1nvpc_ 38 FSKAIGDAEW 47 (47) T ss_dssp EEEEEEEEEC T ss_pred EEEEEEEECC T ss_conf 9840066639 No 7 >d1bf5a2 b.2.5.5 (A:317-568) STAT-1, DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]} Probab=3.31 E-value=1.5e+02 Score=12.06 Aligned_cols=13 Identities=15% Similarity=0.273 Sum_probs=10.0 Q ss_pred CCCCEEEEEEECH Q ss_conf 9863279999944 Q 537021.9.peg.7 37 YPDEKFAIFFLNE 49 (58) Q Consensus 37 ypdekfaifflne 49 (58) --||||+|.|--+ T Consensus 110 VtEEk~~l~F~t~ 122 (252) T d1bf5a2 110 VTEELHSLSFETQ 122 (252) T ss_dssp CSCCCBCEEEEEE T ss_pred HHHHEEEEEEEEE T ss_conf 0030112676778 No 8 >d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Escherichia coli [TaxId: 562]} Probab=3.08 E-value=77 Score=13.51 Aligned_cols=15 Identities=33% Similarity=0.521 Sum_probs=5.1 Q ss_pred CCCCEEEEEEECHHH Q ss_conf 986327999994466 Q 537021.9.peg.7 37 YPDEKFAIFFLNEEG 51 (58) Q Consensus 37 ypdekfaifflneeg 51 (58) ||+-|+++-..++.| T Consensus 25 ~p~~kl~~g~~~~~G 39 (162) T d1tkea2 25 WPHTKMAIGPVIDNG 39 (162) T ss_dssp STTCEECCCCEETTE T ss_pred CCCCEEEECCCCCCE T ss_conf 799699852432876 No 9 >d2je8a4 b.18.1.5 (A:28-219) Beta-mannosidase {Bacteroides thetaiotaomicron [TaxId: 818]} Probab=3.01 E-value=1.8e+02 Score=11.66 Aligned_cols=8 Identities=38% Similarity=1.120 Sum_probs=0.0 Q ss_pred EEEEEEEE Q ss_conf 66899995 Q 537021.9.peg.7 19 WQEVYIEF 26 (58) Q Consensus 19 wqevyief 26 (58) ||.|++|+ T Consensus 183 wr~V~Le~ 190 (192) T d2je8a4 183 WRPVTLRF 190 (192) T ss_dssp CSCEEEEE T ss_pred CCCEEEEE T ss_conf 78889999 No 10 >d1j5wa_ d.104.1.1 (A:) Glycyl-tRNA synthetase (GlyRS) alpha chain {Thermotoga maritima [TaxId: 2336]} Probab=2.97 E-value=1.9e+02 Score=11.54 Aligned_cols=21 Identities=29% Similarity=0.525 Sum_probs=0.0 Q ss_pred CCCCCEEEEEEEEEECCCCCH Q ss_conf 105742466899995588520 Q 537021.9.peg.7 12 RTTGEIEWQEVYIEFSPTPTD 32 (58) Q Consensus 12 rttgeiewqevyiefsptptd 32 (58) |.-|.-.|.-.|++-|-.|+| T Consensus 41 r~lgp~pw~~ayvqpsrRP~D 61 (281) T d1j5wa_ 41 GSLRKGPWKVAYVQPSRRPTD 61 (281) T ss_dssp GGGCSSCEEEEEEEEEECCC- T ss_pred HHCCCCCCCCCCCCCCCCCCC T ss_conf 404998753234355668865 Done!