Query 537021.9.peg.786_1 Match_columns 38 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 33803 Date Tue May 24 23:51:32 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_786.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 >1co6_A Protein (cytochrome C2 32.5 3.4 1E-04 21.7 -2.6 10 2-11 12-21 (43) 2 >1kxl_A Cell division control 18.9 82 0.0024 14.8 2.8 29 10-38 28-56 (150) 3 >2jqo_A Hypothetical protein Y 18.6 58 0.0017 15.5 1.6 13 22-34 72-84 (108) 4 >1p32_A Mitochondrial matrix p 16.8 82 0.0024 14.8 2.0 16 17-32 16-31 (145) 5 >2d9t_A Tudor domain-containin 11.7 1.3E+02 0.0039 13.7 2.2 21 16-36 30-50 (78) 6 >2h85_A Putative ORF1AB polypr 9.7 1.5E+02 0.0043 13.5 1.5 13 21-33 21-33 (34) 7 >2zx2_A CSL3; lectin, rhamnose 9.4 1.6E+02 0.0048 13.3 2.8 23 16-38 9-31 (98) 8 >2zx2_A CSL3; lectin, rhamnose 7.1 2.1E+02 0.0061 12.8 2.5 23 16-38 11-33 (97) 9 >1i25_A Huwentoxin-II, HWTX-II 6.9 1.3E+02 0.004 13.7 0.3 10 16-25 17-26 (37) 10 >1lfk_A OXYB, P450 monooxygena 6.7 1.4E+02 0.0041 13.6 0.3 16 6-21 82-97 (125) No 1 >>1co6_A Protein (cytochrome C2); electron transport(heme protein); HET: HEM; 1.60A {Rhodopseudomonas viridis} (A:1-13,A:78-107) Probab=32.49 E-value=3.4 Score=21.65 Aligned_cols=10 Identities=70% Similarity=1.242 Sum_probs=8.2 Q ss_pred CEEEEEEEEE Q ss_conf 0279999978 Q 537021.9.peg.7 2 QCKMVFLDVK 11 (38) Q Consensus 2 qckmvfldvk 11 (38) ||||+|..|| T Consensus 12 qckmifagvk 21 (43) T 1co6_A 12 QCKMIFAGVK 21 (43) T ss_dssp HHSCCCCCCC T ss_pred HCCCCCCCCC T ss_conf 5677888999 No 2 >>1kxl_A Cell division control protein 13; DNA-binding domain, telomere, single-stranded DNA, OB fold, cell cycle; NMR {Saccharomyces cerevisiae} (A:1-150) Probab=18.94 E-value=82 Score=14.78 Aligned_cols=29 Identities=24% Similarity=0.342 Sum_probs=23.1 Q ss_pred EEEEEEEEEEEECCCCEEEEEEEEEECCC Q ss_conf 78610587531137637899975101159 Q 537021.9.peg.7 10 VKVAGYQIKKKECKGEKIKVFFADFTRKS 38 (38) Q Consensus 10 vkvagyqikkkeckgekikvffadftrks 38 (38) +.+-|+-+--+--+|...+.-|.|||..+ T Consensus 28 ~t~fglLVs~~~~~~~~~~fvFTDFT~N~ 56 (150) T 1kxl_A 28 ITMFGMLVSCSFDKPAFISFVFSDFTKND 56 (150) T ss_dssp EEECCCCCEEECCCTTEEEEEECCSSCCC T ss_pred EEEEEEEEEEECCCCCEEEEEEEECCCCC T ss_conf 47778678860489957999984346686 No 3 >>2jqo_A Hypothetical protein YOBA; OB-fold, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Bacillus subtilis} (A:) Probab=18.56 E-value=58 Score=15.53 Aligned_cols=13 Identities=54% Similarity=0.782 Sum_probs=9.4 Q ss_pred CCCCEEEEEEEEE Q ss_conf 3763789997510 Q 537021.9.peg.7 22 CKGEKIKVFFADF 34 (38) Q Consensus 22 ckgekikvffadf 34 (38) -.|.||||+|... T Consensus 72 KtG~KIKVW~sqi 84 (108) T 2jqo_A 72 KRGEKIKVWFHTR 84 (108) T ss_dssp CTTEEEEEEEEEE T ss_pred CCCCEEEEEHHHH T ss_conf 0698899835734 No 4 >>1p32_A Mitochondrial matrix protein, SF2P32; 2.25A {Homo sapiens} (A:31-175) Probab=16.78 E-value=82 Score=14.76 Aligned_cols=16 Identities=38% Similarity=0.480 Sum_probs=12.9 Q ss_pred EEEEECCCCEEEEEEE Q ss_conf 7531137637899975 Q 537021.9.peg.7 17 IKKKECKGEKIKVFFA 32 (38) Q Consensus 17 ikkkeckgekikvffa 32 (38) +-+|++.+|+|+|.|- T Consensus 16 ~L~r~~~~E~I~V~f~ 31 (145) T 1p32_A 16 KLVRKVAGEKITVTFN 31 (145) T ss_dssp EEEEEETTEEEEEEEE T ss_pred EEEEECCCCEEEEEEE T ss_conf 9999719934999998 No 5 >>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} (A:) Probab=11.67 E-value=1.3e+02 Score=13.75 Aligned_cols=21 Identities=19% Similarity=0.366 Sum_probs=14.7 Q ss_pred EEEEEECCCCEEEEEEEEEEC Q ss_conf 875311376378999751011 Q 537021.9.peg.7 16 QIKKKECKGEKIKVFFADFTR 36 (38) Q Consensus 16 qikkkeckgekikvffadftr 36 (38) +|....-.++++.|||-||.. T Consensus 30 ~I~~i~~~~~~~~V~fvDyG~ 50 (78) T 2d9t_A 30 EVEALHSSGMTAVVKFTDYGN 50 (78) T ss_dssp EEEEECSSSSEEEEEETTTTE T ss_pred EEEEECCCCCEEEEEEEECCC T ss_conf 999964899989999996898 No 6 >>2h85_A Putative ORF1AB polyprotein; endoribonuclease, RNA, NSP, viral protein; 2.60A {Sars coronavirus} (A:314-347) Probab=9.74 E-value=1.5e+02 Score=13.54 Aligned_cols=13 Identities=23% Similarity=0.705 Sum_probs=10.8 Q ss_pred ECCCCEEEEEEEE Q ss_conf 1376378999751 Q 537021.9.peg.7 21 ECKGEKIKVFFAD 33 (38) Q Consensus 21 eckgekikvffad 33 (38) =|+.+||..|+.. T Consensus 21 WCkd~kv~TFYPq 33 (34) T 2h85_A 21 WCKDGHVETFYPK 33 (34) T ss_dssp EEETTEEEEEEEC T ss_pred EECCCCCCEECCC T ss_conf 9537970055134 No 7 >>2zx2_A CSL3; lectin, rhamnose, innate immunity, immune system, sugar binding protein; HET: RAM; 1.80A {Oncorhynchus keta} PDB: 2zx1_A 2zx0_A* 2zx3_A* 2zx4_A* (A:1-98) Probab=9.39 E-value=1.6e+02 Score=13.32 Aligned_cols=23 Identities=26% Similarity=0.475 Sum_probs=18.1 Q ss_pred EEEEEECCCCEEEEEEEEEECCC Q ss_conf 87531137637899975101159 Q 537021.9.peg.7 16 QIKKKECKGEKIKVFFADFTRKS 38 (38) Q Consensus 16 qikkkeckgekikvffadftrks 38 (38) +...-.|.|..|.|..|.|-|.+ T Consensus 9 ~~~~L~C~~~~I~I~~A~YGR~~ 31 (98) T 2zx2_A 9 SDALLQCDGAKIHIKRANYGRRQ 31 (98) T ss_dssp SEEEEECTTSEEEEEEEEEEBSC T ss_pred CCEEEECCCCEEEEEEEECCCCC T ss_conf 98699769979999985658888 No 8 >>2zx2_A CSL3; lectin, rhamnose, innate immunity, immune system, sugar binding protein; HET: RAM; 1.80A {Oncorhynchus keta} PDB: 2zx1_A 2zx0_A* 2zx3_A* 2zx4_A* (A:99-195) Probab=7.13 E-value=2.1e+02 Score=12.79 Aligned_cols=23 Identities=17% Similarity=0.359 Sum_probs=18.1 Q ss_pred EEEEEECCCCEEEEEEEEEECCC Q ss_conf 87531137637899975101159 Q 537021.9.peg.7 16 QIKKKECKGEKIKVFFADFTRKS 38 (38) Q Consensus 16 qikkkeckgekikvffadftrks 38 (38) +-..-.|.+..|.|.+|-|-|.+ T Consensus 11 ~~~~L~C~~g~I~I~~A~YGR~~ 33 (97) T 2zx2_A 11 SDSQLLCDRGEIRIQRANYGRRQ 33 (97) T ss_dssp SEEEEECSSSCEEEEEEEEEBSC T ss_pred CCCEEEEECCEEEEEEECCCCCC T ss_conf 86275673898999995537756 No 9 >>1i25_A Huwentoxin-II, HWTX-II; neurotoxin, insecticidal toxin, disulfide bonds; NMR {Ornithoctonus huwena} (A:) Probab=6.87 E-value=1.3e+02 Score=13.71 Aligned_cols=10 Identities=60% Similarity=0.999 Sum_probs=7.0 Q ss_pred EEEEEECCCC Q ss_conf 8753113763 Q 537021.9.peg.7 16 QIKKKECKGE 25 (38) Q Consensus 16 qikkkeckge 25 (38) .-|+|+|+|. T Consensus 17 ~ck~kkc~gg 26 (37) T 1i25_A 17 PCKKKKCKGG 26 (37) T ss_dssp BCBCCCCCTT T ss_pred CCCCCCCCCC T ss_conf 3300337777 No 10 >>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} (A:1-75,A:285-334) Probab=6.69 E-value=1.4e+02 Score=13.63 Aligned_cols=16 Identities=38% Similarity=0.490 Sum_probs=11.7 Q ss_pred EEEEEEEEEEEEEEEE Q ss_conf 9999786105875311 Q 537021.9.peg.7 6 VFLDVKVAGYQIKKKE 21 (38) Q Consensus 6 vfldvkvagyqikkke 21 (38) .--|+.+.||.|++.+ T Consensus 82 a~eDv~i~G~~IpkG~ 97 (125) T 1lfk_A 82 AREDLTLAGQEIKKGD 97 (125) T ss_dssp ESSCEEETTEEECTTC T ss_pred CCCCEEECCCCCCCCC T ss_conf 4577366384556798 Done!