Query 537021.9.peg.786_1
Match_columns 38
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 23785
Date Tue May 24 23:43:21 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_786.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kxl_A Cell division control p 14.8 74 0.0031 14.2 2.8 28 10-37 28-55 (199)
2 2jqo_A Hypothetical protein YO 12.3 75 0.0032 14.2 1.6 12 23-34 73-84 (108)
3 1x88_A Kinesin-like protein KI 11.2 50 0.0021 15.1 0.4 11 19-29 2-12 (359)
4 2d9t_A Tudor domain-containing 9.1 1.2E+02 0.0049 13.3 2.2 13 23-35 37-49 (78)
5 1g5v_A SurviVal motor neuron p 5.2 1.9E+02 0.008 12.2 2.3 20 17-36 32-51 (88)
6 1hul_A Interleukin-5; cytokine 4.2 1.3E+02 0.0053 13.1 -0.4 13 17-29 77-89 (108)
7 2zx2_A CSL3; lectin, rhamnose, 4.0 2.3E+02 0.0099 11.7 2.8 19 19-37 112-130 (195)
8 2hx6_A Ribonuclease, GP61.9; a 3.7 1.9E+02 0.008 12.2 0.2 11 1-11 129-139 (153)
9 1wjv_A Cell growth regulating 3.1 2.1E+02 0.0087 12.0 -0.2 20 2-21 5-24 (79)
10 1i25_A Huwentoxin-II, HWTX-II; 2.9 2.8E+02 0.012 11.4 0.3 7 18-24 19-25 (37)
No 1
>1kxl_A Cell division control protein 13; DNA-binding domain, telomere, single-stranded DNA, OB fold, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: b.40.4.3 PDB: 1s40_A
Probab=14.80 E-value=74 Score=14.24 Aligned_cols=28 Identities=25% Similarity=0.348 Sum_probs=22.5
Q ss_pred EEEEEEEEEEEECCCCEEEEEEEEEECC
Q ss_conf 7861058753113763789997510115
Q 537021.9.peg.7 10 VKVAGYQIKKKECKGEKIKVFFADFTRK 37 (38)
Q Consensus 10 vkvagyqikkkeckgekikvffadftrk 37 (38)
+.+-|+-+--+--+|..+++-|.|||..
T Consensus 28 ~t~fglLVs~~~~~~~~~~fvFTDFT~N 55 (199)
T 1kxl_A 28 ITMFGMLVSCSFDKPAFISFVFSDFTKN 55 (199)
T ss_dssp EEECCCCCEEECCCTTEEEEEECCSSCC
T ss_pred EEEEEEEEEEECCCCCEEEEEEEECCCC
T ss_conf 4777867886048995799998434668
No 2
>2jqo_A Hypothetical protein YOBA; OB-fold, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Bacillus subtilis}
Probab=12.28 E-value=75 Score=14.21 Aligned_cols=12 Identities=58% Similarity=0.924 Sum_probs=9.4
Q ss_pred CCCEEEEEEEEE
Q ss_conf 763789997510
Q 537021.9.peg.7 23 KGEKIKVFFADF 34 (38)
Q Consensus 23 kgekikvffadf 34 (38)
.|.||||+|...
T Consensus 73 ~G~KIKVW~S~i 84 (108)
T 2jqo_A 73 RGEKIKVWFHTR 84 (108)
T ss_dssp TTEEEEEEEEEE
T ss_pred CCCEEEEEHHHH
T ss_conf 688899855744
No 3
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* 2fky_A* 2fl2_A* 2fl6_A* 2ieh_A* 2q2y_A* 2q2z_A* ...
Probab=11.22 E-value=50 Score=15.06 Aligned_cols=11 Identities=64% Similarity=0.839 Sum_probs=3.9
Q ss_pred EEECCCCEEEE
Q ss_conf 31137637899
Q 537021.9.peg.7 19 KKECKGEKIKV 29 (38)
Q Consensus 19 kkeckgekikv 29 (38)
|+|-||+.|+|
T Consensus 2 ~~~~~~~nIkV 12 (359)
T 1x88_A 2 KKEEKGKNIQV 12 (359)
T ss_dssp -------CCEE
T ss_pred CCCCCCCCEEE
T ss_conf 75569996899
No 4
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=9.09 E-value=1.2e+02 Score=13.25 Aligned_cols=13 Identities=31% Similarity=0.480 Sum_probs=10.5
Q ss_pred CCCEEEEEEEEEE
Q ss_conf 7637899975101
Q 537021.9.peg.7 23 KGEKIKVFFADFT 35 (38)
Q Consensus 23 kgekikvffadft 35 (38)
.+.++.|||-||-
T Consensus 37 ~~~~~~V~fvDYG 49 (78)
T 2d9t_A 37 SGMTAVVKFTDYG 49 (78)
T ss_dssp SSSEEEEEETTTT
T ss_pred CCCEEEEEEEECC
T ss_conf 8998999999089
No 5
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=5.17 E-value=1.9e+02 Score=12.19 Aligned_cols=20 Identities=20% Similarity=0.338 Sum_probs=13.6
Q ss_pred EEEEECCCCEEEEEEEEEEC
Q ss_conf 75311376378999751011
Q 537021.9.peg.7 17 IKKKECKGEKIKVFFADFTR 36 (38)
Q Consensus 17 ikkkeckgekikvffadftr 36 (38)
|..-...+....|||-||-.
T Consensus 32 I~~i~~~~~~~~V~fvDYGn 51 (88)
T 1g5v_A 32 IASIDFKRETCVVVYTGYGN 51 (88)
T ss_dssp EEEEETTTTEEEEEETTTCC
T ss_pred EEEECCCCCEEEEEEEECCC
T ss_conf 99853789969999992699
No 6
>1hul_A Interleukin-5; cytokine; 2.40A {Homo sapiens} SCOP: a.26.1.2 PDB: 3b5k_A
Probab=4.18 E-value=1.3e+02 Score=13.08 Aligned_cols=13 Identities=38% Similarity=0.621 Sum_probs=9.8
Q ss_pred EEEEECCCCEEEE
Q ss_conf 7531137637899
Q 537021.9.peg.7 17 IKKKECKGEKIKV 29 (38)
Q Consensus 17 ikkkeckgekikv 29 (38)
..||+|.||.-+|
T Consensus 77 ~QkkkCg~eRr~V 89 (108)
T 1hul_A 77 GQKKKCGEERRRV 89 (108)
T ss_dssp HHHHTTSSEEEEH
T ss_pred HHHHHCCHHHHHH
T ss_conf 8886443057639
No 7
>2zx2_A CSL3; lectin, rhamnose, innate immunity, immune system, sugar binding protein; HET: RAM; 1.80A {Oncorhynchus keta} PDB: 2zx1_A 2zx0_A* 2zx3_A* 2zx4_A*
Probab=4.05 E-value=2.3e+02 Score=11.74 Aligned_cols=19 Identities=21% Similarity=0.492 Sum_probs=11.5
Q ss_pred EEECCCCEEEEEEEEEECC
Q ss_conf 3113763789997510115
Q 537021.9.peg.7 19 KKECKGEKIKVFFADFTRK 37 (38)
Q Consensus 19 kkeckgekikvffadftrk 37 (38)
.-.|.+.+|.+.+|.|-|.
T Consensus 112 ~L~C~~~~I~I~~A~YGR~ 130 (195)
T 2zx2_A 112 QLLCDRGEIRIQRANYGRR 130 (195)
T ss_dssp EEECSSSCEEEEEEEEEBS
T ss_pred EEEEECCEEEEEEEEECCC
T ss_conf 7276089789988772574
No 8
>2hx6_A Ribonuclease, GP61.9; alpha/beta fold, hydrolase; NMR {Enterobacteria phage T4}
Probab=3.71 E-value=1.9e+02 Score=12.19 Aligned_cols=11 Identities=36% Similarity=0.999 Sum_probs=6.6
Q ss_pred CCEEEEEEEEE
Q ss_conf 90279999978
Q 537021.9.peg.7 1 LQCKMVFLDVK 11 (38)
Q Consensus 1 lqckmvfldvk 11 (38)
|||.|.+..-+
T Consensus 129 L~CRMaivNsr 139 (153)
T 2hx6_A 129 LQCRMAIINSR 139 (153)
T ss_dssp EEEEEEEECCS
T ss_pred CEEEEEEEECC
T ss_conf 35889997055
No 9
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2
Probab=3.06 E-value=2.1e+02 Score=12.01 Aligned_cols=20 Identities=30% Similarity=0.509 Sum_probs=15.1
Q ss_pred CEEEEEEEEEEEEEEEEEEE
Q ss_conf 02799999786105875311
Q 537021.9.peg.7 2 QCKMVFLDVKVAGYQIKKKE 21 (38)
Q Consensus 2 qckmvfldvkvagyqikkke 21 (38)
.|+||+..-..-|--+||+.
T Consensus 5 ~~~MV~F~C~~CgdtlKK~k 24 (79)
T 1wjv_A 5 SSGMVFFTCNACGESVKKIQ 24 (79)
T ss_dssp SCCCCEEEESSSCCEEETTH
T ss_pred CCEEEEEECCCCCCEECCCC
T ss_conf 66325888887878712201
No 10
>1i25_A Huwentoxin-II, HWTX-II; neurotoxin, insecticidal toxin, disulfide bonds; NMR {Ornithoctonus huwena} SCOP: g.3.6.2
Probab=2.89 E-value=2.8e+02 Score=11.38 Aligned_cols=7 Identities=86% Similarity=1.526 Sum_probs=0.0
Q ss_pred EEEECCC
Q ss_conf 5311376
Q 537021.9.peg.7 18 KKKECKG 24 (38)
Q Consensus 18 kkkeckg 24 (38)
|.|+|+|
T Consensus 19 k~kk~kg 25 (37)
T 1i25_A 19 KKKKCKG 25 (37)
T ss_dssp BCCCCCT
T ss_pred CCCCCCC
T ss_conf 7666887
Done!