Query 537021.9.peg.786_1 Match_columns 38 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Tue May 24 23:32:08 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_786.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1i25a_ g.3.6.2 (A:) Huwentoxi 7.5 48 0.0035 14.0 0.3 10 16-25 17-26 (37) 2 d1mhna_ b.34.9.1 (A:) Survival 7.5 80 0.0058 12.9 2.3 21 16-36 24-44 (59) 3 d2d9ta1 b.34.9.1 (A:8-67) Tudo 6.3 94 0.0068 12.5 2.2 20 17-36 24-43 (60) 4 d1p32a_ d.25.1.1 (A:) Acidic m 5.4 1.1E+02 0.0077 12.3 2.0 14 19-32 48-61 (209) 5 d1kxla_ b.40.4.3 (A:) CDC13 ss 5.3 1.1E+02 0.0079 12.2 2.8 28 10-37 24-51 (187) 6 d1jnia_ a.138.1.3 (A:) Peripla 5.1 50 0.0036 13.9 -0.7 11 11-21 9-19 (68) 7 d1hula_ a.26.1.2 (A:) Interleu 5.0 58 0.0043 13.6 -0.4 13 17-29 77-89 (108) 8 d2asba2 d.52.3.1 (A:184-262) T 4.9 1.1E+02 0.0083 12.1 1.0 11 20-30 65-75 (79) 9 d2h85a2 d.294.1.2 (A:191-345) 4.5 1.2E+02 0.0091 11.9 1.3 10 22-31 143-152 (155) 10 d2cnza1 b.2.3.2 (A:22-144) Saf 3.7 1.4E+02 0.01 11.6 1.8 9 8-16 114-122 (123) No 1 >d1i25a_ g.3.6.2 (A:) Huwentoxin-II {Chinese bird spider (Selenocosmia huwena) [TaxId: 29017]} Probab=7.54 E-value=48 Score=13.97 Aligned_cols=10 Identities=60% Similarity=0.999 Sum_probs=6.9 Q ss_pred EEEEEECCCC Q ss_conf 8753113763 Q 537021.9.peg.7 16 QIKKKECKGE 25 (38) Q Consensus 16 qikkkeckge 25 (38) .-|+|+|+|. T Consensus 17 pck~kkc~gg 26 (37) T d1i25a_ 17 PCKKKKCKGG 26 (37) T ss_dssp BCBCCCCCTT T ss_pred CCCCCCCCCC T ss_conf 7763417777 No 2 >d1mhna_ b.34.9.1 (A:) Survival motor neuron protein 1, smn {Human (Homo sapiens) [TaxId: 9606]} Probab=7.53 E-value=80 Score=12.89 Aligned_cols=21 Identities=19% Similarity=0.322 Sum_probs=14.1 Q ss_pred EEEEEECCCCEEEEEEEEEEC Q ss_conf 875311376378999751011 Q 537021.9.peg.7 16 QIKKKECKGEKIKVFFADFTR 36 (38) Q Consensus 16 qikkkeckgekikvffadftr 36 (38) .|..-.-.+.+..|+|-||-. T Consensus 24 ~I~~v~~~~~~~~V~fvDYGn 44 (59) T d1mhna_ 24 TIASIDFKRETCVVVYTGYGN 44 (59) T ss_dssp EEEEEETTTTEEEEEETTTTE T ss_pred EEEEECCCCCEEEEEEEECCC T ss_conf 999974889999999980899 No 3 >d2d9ta1 b.34.9.1 (A:8-67) Tudor domain-containing protein 3, TDRD3 {Mouse (Mus musculus) [TaxId: 10090]} Probab=6.26 E-value=94 Score=12.54 Aligned_cols=20 Identities=20% Similarity=0.356 Sum_probs=13.6 Q ss_pred EEEEECCCCEEEEEEEEEEC Q ss_conf 75311376378999751011 Q 537021.9.peg.7 17 IKKKECKGEKIKVFFADFTR 36 (38) Q Consensus 17 ikkkeckgekikvffadftr 36 (38) |.+....+....|+|-||-. T Consensus 24 I~~i~~~~~~~~V~fvDYGn 43 (60) T d2d9ta1 24 VEALHSSGMTAVVKFTDYGN 43 (60) T ss_dssp EEEECSSSSEEEEEETTTTE T ss_pred EEEECCCCCEEEEEEECCCC T ss_conf 99982789999999987999 No 4 >d1p32a_ d.25.1.1 (A:) Acidic mitochondrial matrix protein p32 {Human (Homo sapiens) [TaxId: 9606]} Probab=5.39 E-value=1.1e+02 Score=12.27 Aligned_cols=14 Identities=43% Similarity=0.648 Sum_probs=10.6 Q ss_pred EEECCCCEEEEEEE Q ss_conf 31137637899975 Q 537021.9.peg.7 19 KKECKGEKIKVFFA 32 (38) Q Consensus 19 kkeckgekikvffa 32 (38) .|+..+|+|.|.|- T Consensus 48 ~R~~~~E~I~V~f~ 61 (209) T d1p32a_ 48 VRKVAGEKITVTFN 61 (209) T ss_dssp EEEETTEEEEEEEE T ss_pred EEECCCCEEEEEEE T ss_conf 99629915999997 No 5 >d1kxla_ b.40.4.3 (A:) CDC13 ssDNA-binding domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=5.26 E-value=1.1e+02 Score=12.22 Aligned_cols=28 Identities=25% Similarity=0.348 Sum_probs=22.3 Q ss_pred EEEEEEEEEEEECCCCEEEEEEEEEECC Q ss_conf 7861058753113763789997510115 Q 537021.9.peg.7 10 VKVAGYQIKKKECKGEKIKVFFADFTRK 37 (38) Q Consensus 10 vkvagyqikkkeckgekikvffadftrk 37 (38) +.+-|+-+--+--.|..+..-|.|||.. T Consensus 24 ~tv~GmLvscs~d~~s~~~fvFTDFT~N 51 (187) T d1kxla_ 24 ITMFGMLVSCSFDKPAFISFVFSDFTKN 51 (187) T ss_dssp EEECCCCCEEECCCTTEEEEEECCSSCC T ss_pred EEEEEEEEEEEECCCCEEEEEEEECCCC T ss_conf 2567767899837996799998324568 No 6 >d1jnia_ a.138.1.3 (A:) Periplasmic nitrate reductase subunit NapB {Haemophilus influenzae [TaxId: 727]} Probab=5.13 E-value=50 Score=13.91 Aligned_cols=11 Identities=45% Similarity=0.670 Sum_probs=7.8 Q ss_pred EEEEEEEEEEE Q ss_conf 86105875311 Q 537021.9.peg.7 11 KVAGYQIKKKE 21 (38) Q Consensus 11 kvagyqikkke 21 (38) ++.||||.++. T Consensus 9 ~i~gy~It~~~ 19 (68) T d1jnia_ 9 SVANYQVTKNV 19 (68) T ss_dssp CCTTCCEETTE T ss_pred CCCCCEECCCC T ss_conf 35686521799 No 7 >d1hula_ a.26.1.2 (A:) Interleukin-5 {Human (Homo sapiens) [TaxId: 9606]} Probab=4.99 E-value=58 Score=13.56 Aligned_cols=13 Identities=38% Similarity=0.621 Sum_probs=10.1 Q ss_pred EEEEECCCCEEEE Q ss_conf 7531137637899 Q 537021.9.peg.7 17 IKKKECKGEKIKV 29 (38) Q Consensus 17 ikkkeckgekikv 29 (38) ..||+|.||.-+| T Consensus 77 ~qkkkCg~eRr~V 89 (108) T d1hula_ 77 GQKKKCGEERRRV 89 (108) T ss_dssp HHHHTTSSEEEEH T ss_pred HHHHHCCHHHHHH T ss_conf 8887444068769 No 8 >d2asba2 d.52.3.1 (A:184-262) Transcription factor NusA, C-terminal domains {Mycobacterium tuberculosis [TaxId: 1773]} Probab=4.90 E-value=1.1e+02 Score=12.12 Aligned_cols=11 Identities=45% Similarity=0.736 Sum_probs=7.8 Q ss_pred EECCCCEEEEE Q ss_conf 11376378999 Q 537021.9.peg.7 20 KECKGEKIKVF 30 (38) Q Consensus 20 keckgekikvf 30 (38) +|..||||.+. T Consensus 65 ~eL~gEkIDii 75 (79) T d2asba2 65 SELSGEKIDII 75 (79) T ss_dssp HHTTTCEEEEE T ss_pred HHHCCCEEEEE T ss_conf 98589648899 No 9 >d2h85a2 d.294.1.2 (A:191-345) Nsp15, C-terminal domain {SARS coronavirus [TaxId: 227859]} Probab=4.48 E-value=1.2e+02 Score=11.93 Aligned_cols=10 Identities=30% Similarity=1.032 Sum_probs=0.0 Q ss_pred CCCCEEEEEE Q ss_conf 3763789997 Q 537021.9.peg.7 22 CKGEKIKVFF 31 (38) Q Consensus 22 ckgekikvff 31 (38) |++++|+.|+ T Consensus 143 ~~d~~i~TfY 152 (155) T d2h85a2 143 CKDGHVETFY 152 (155) T ss_dssp EETTEEEEEE T ss_pred ECCCCCCEEE T ss_conf 6489611670 No 10 >d2cnza1 b.2.3.2 (A:22-144) SafA pilus subunit {Salmonella typhimurium [TaxId: 90371]} Probab=3.75 E-value=1.4e+02 Score=11.61 Aligned_cols=9 Identities=44% Similarity=0.951 Sum_probs=0.0 Q ss_pred EEEEEEEEE Q ss_conf 997861058 Q 537021.9.peg.7 8 LDVKVAGYQ 16 (38) Q Consensus 8 ldvkvagyq 16 (38) +.+.|+||| T Consensus 114 vTl~va~YQ 122 (123) T d2cnza1 114 ITLDVVGYQ 122 (123) T ss_dssp EEEEEEEEE T ss_pred EEEEEEEEC T ss_conf 699876006 Done!