HHsearch alignment for GI: peg_788 and conserved domain: PRK10814
>PRK10814 outer membrane-specific lipoprotein transporter subunit LolC; Provisional.
Probab=100.00 E-value=0 Score=346.02 Aligned_cols=260 Identities=22% Similarity=0.423 Sum_probs=225.7
Q ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHH
Q ss_conf 42347999999875225545468999999999999999999999999876999996311102453000000000121366
Q 537021.9.peg.7 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQF 82 (270)
Q Consensus 3 m~~~~~~~iA~R~l~~~k~r~~~~~is~ls~lgI~igv~~li~~lsv~~G~~~~i~~~i~~~~~~i~i~~~~~~~~~~~~ 82 (270)
T Consensus 1 m~~~~~~fIA~RYl~~kk~~~~~~~is~iSilGI~iGvaaLivvlSV~nGf~~~i~~~i~~~~phi~i~~~~g~-~~~~~ 79 (396)
T PRK10814 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGS-LNPQQ 79 (396)
T ss_pred CCCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC-CCHHH
T ss_conf 98619999999975446778723799999999999999999999999972899999998585688899658998-89899
Q ss_pred HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHC
Q ss_conf 65554226410346654200111112223322101112431000001200110027754211112342101345455421
Q 537021.9.peg.7 83 IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGI 162 (270)
Q Consensus 83 ~~~~l~~~~~V~~~~p~i~~~~~i~~~~~~~~~v~i~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiG~~lA~~L~l 162 (270)
T Consensus 80 ~~~~~~~~~~v~~~sp~i~~~~~l~~-~~~~~~~~l~Gvd~~~~~~l~~~~--~~~~~~~~~~~~~~iiiG~~lA~~L~v 156 (396)
T PRK10814 80 LPESAVKLDGVNRVAPLTTGDVVLQS-ARSVAVGVMLGIDPAQKDPLTPYL--VNVKQTDLEPGKYNVILGEQLAGQLGV 156 (396)
T ss_pred HHHHHHHCCCCCEEEEEEECCCEEEC-CCCEEEEEEEEECHHHHHHHHHHH--HCCCHHHCCCCCCCEEECHHHHHHCCC
T ss_conf 89998708786268666531301313-785147999987678765788988--507365403899728985899986399
Q ss_pred CCCCEEEECCCCCC-CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHCCCC-CCEEEEEEEECCHHHHHHH
Q ss_conf 33320231134421-000122110000122102331024455516898548899971899-8710799995698899999
Q 537021.9.peg.7 163 SIGDKINILSPYGD-VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240 (270)
Q Consensus 163 ~vGD~i~l~~~~~~-~~~~~~~~~~~~f~V~GI~~sg~~~~D~~~v~~~l~~~q~l~~~~-~~~~~i~i~l~d~~~~~~~ 240 (270)
T Consensus 157 ~~Gd~i~l~~p~~~~~~~~g~~p~~~~f~V~GiF~~g-~e~D~~~v~~~l~~a~~ll~~~~~~is~i~i~l~d~~~~~~~ 235 (396)
T PRK10814 157 NRGDQIRLMVPSASQFTPMGRIPSQRLFNVIGTFAAN-SEVDGYQMLVNIQDASRLMRYPAGNITGWRLWLDEPLKVDSL 235 (396)
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECC-CCCCCEEEEECHHHHHHHHCCCCCCEEEEEEEECCHHHHHHH
T ss_conf 8798899993688766756668633789999986226-633460799649999998466878714899995787668999
Q ss_pred HHHHHHHCCCCEEEEEHHHHHHHHHHHHCC
Q ss_conf 999998619985999689988989998609
Q 537021.9.peg.7 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270 (270)
Q Consensus 241 ~~~i~~~l~~~~~v~~w~e~~~~lf~ai~~ 270 (270)
T Consensus 236 ~~---~~l~~~~~~~~w~e~n~~lf~al~~ 262 (396)
T PRK10814 236 SQ---QTLPEGTKWQDWRERKGELFQAVRM 262 (396)
T ss_pred HH---HHCCCCCEEEEHHHHHHHHHHHHHH
T ss_conf 99---7544575474799989999999999