HHsearch alignment for GI: peg_788 and conserved domain: TIGR02212

>TIGR02212 lolCE lipoprotein releasing system, transmembrane protein, LolC/E family; InterPro: IPR011925 This entry describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC .; GO: 0006810 transport, 0009276 1-2nm peptidoglycan-based cell wall, 0016021 integral to membrane.
Probab=100.00  E-value=0  Score=432.26  Aligned_cols=263  Identities=35%  Similarity=0.598  Sum_probs=251.5

Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC-CCCCHHHHH
Q ss_conf             4799999987522554546899999999999999999999999987699999631110245300000000-012136665
Q 537021.9.peg.7    6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY-PLVDYQFIA   84 (270)
Q Consensus         6 ~~~~~iA~R~l~~~k~r~~~~~is~ls~lgI~igv~~li~~lsv~~G~~~~i~~~i~~~~~~i~i~~~~~-~~~~~~~~~   84 (270)
T Consensus         1 ~~~l~Ig~RY~RAk~~n~F~s~I~~~S~iGI~LGVaaLIvVlSVMNGFe~eL~~riLg~~PH~~~~~~~~~~~~~~~~~~   80 (414)
T TIGR02212         1 PLSLFIGLRYLRAKRRNRFVSFISLFSIIGIALGVAALIVVLSVMNGFERELRQRILGVIPHAIIESKQNAPISDWQELL   80 (414)
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCHHHHH
T ss_conf             92367877777752058864511688999999988886666666666799882074101261888347898998989999


Q ss_pred             HHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCHHHHHHHHHCC
Q ss_conf             55422641034665420011111222332210111243100000120011002775421111-23421013454554213
Q 537021.9.peg.7   85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR-GKGVIIGKDLARNLGIS  163 (270)
Q Consensus        85 ~~l~~~~~V~~~~p~i~~~~~i~~~~~~~~~v~i~Gv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~iiiG~~lA~~L~l~  163 (270)
T Consensus        81 ~~~~~~pgv~~aaP~v~~~~lv~~-~~~~~~~~V~Gv~~~~~~~~~~~~~~~~~g~~~~f~~G~~~iiiG~~lA~~LgV~  159 (414)
T TIGR02212        81 ETIEKNPGVKAAAPIVSGQALVQS-AGKVSGVQVRGVDPSDEDKLSAISNNVKQGALKKFKPGEYNIIIGEQLAEKLGVS  159 (414)
T ss_pred             HHHHHCCCCEEEEEEEEEEEEEEE-CCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHCCCC
T ss_conf             999728980688546641489982-7834599985566033454555320102455445568852788715889845899


Q ss_pred             CCCEEEECCCC-CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHCCCC-CCEEEEEEEECCHHHHHHHH
Q ss_conf             33202311344-21000122110000122102331024455516898548899971899-87107999956988999999
Q 537021.9.peg.7  164 IGDKINILSPY-GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH  241 (270)
Q Consensus       164 vGD~i~l~~~~-~~~~~~~~~~~~~~f~V~GI~~sg~~~~D~~~v~~~l~~~q~l~~~~-~~~~~i~i~l~d~~~~~~~~  241 (270)
T Consensus       160 ~GD~~~li~p~~~~~t~~G~~P~~k~f~V~giF~~gm~e~D~~~~l~p~~dA~~f~~~~~~~v~g~~lk~~Dp~~a~~l~  239 (414)
T TIGR02212       160 VGDKVTLISPENSNVTPFGEIPRQKRFTVIGIFSTGMGEVDGYLALMPLEDAQRFLRYGPDQVTGLRLKLDDPFQADALA  239 (414)
T ss_pred             CCCEEEEEECCCCCCCEEECCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHH
T ss_conf             89779999828975210001450466899999970110320566750189999860899763306899823865315689


Q ss_pred             HHHHHHCCCCEEEEEHHHHHHHHHHHHCC
Q ss_conf             99998619985999689988989998609
Q 537021.9.peg.7  242 ENIVRILGNGVVVIDWQQRYQIFFSCYES  270 (270)
Q Consensus       242 ~~i~~~l~~~~~v~~w~e~~~~lf~ai~~  270 (270)
T Consensus       240 ~~~~~~~~-~~~~~dW~~~~g~~F~A~~~  267 (414)
T TIGR02212       240 QQVQPELG-ELYVRDWRDQNGELFSAIQM  267 (414)
T ss_pred             HHHHHHHC-CEEEECHHHHHHHHHHHHHH
T ss_conf             99988604-24320056653558999999