HHsearch alignment for GI: peg_788 and conserved domain: TIGR02212
>TIGR02212 lolCE lipoprotein releasing system, transmembrane protein, LolC/E family; InterPro: IPR011925 This entry describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC .; GO: 0006810 transport, 0009276 1-2nm peptidoglycan-based cell wall, 0016021 integral to membrane.
Probab=100.00 E-value=0 Score=432.26 Aligned_cols=263 Identities=35% Similarity=0.598 Sum_probs=251.5
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC-CCCCHHHHH
Q ss_conf 4799999987522554546899999999999999999999999987699999631110245300000000-012136665
Q 537021.9.peg.7 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY-PLVDYQFIA 84 (270)
Q Consensus 6 ~~~~~iA~R~l~~~k~r~~~~~is~ls~lgI~igv~~li~~lsv~~G~~~~i~~~i~~~~~~i~i~~~~~-~~~~~~~~~ 84 (270)
T Consensus 1 ~~~l~Ig~RY~RAk~~n~F~s~I~~~S~iGI~LGVaaLIvVlSVMNGFe~eL~~riLg~~PH~~~~~~~~~~~~~~~~~~ 80 (414)
T TIGR02212 1 PLSLFIGLRYLRAKRRNRFVSFISLFSIIGIALGVAALIVVLSVMNGFERELRQRILGVIPHAIIESKQNAPISDWQELL 80 (414)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCCCCCCCHHHHH
T ss_conf 92367877777752058864511688999999988886666666666799882074101261888347898998989999
Q ss_pred HHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC-CCCCCCHHHHHHHHHCC
Q ss_conf 55422641034665420011111222332210111243100000120011002775421111-23421013454554213
Q 537021.9.peg.7 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR-GKGVIIGKDLARNLGIS 163 (270)
Q Consensus 85 ~~l~~~~~V~~~~p~i~~~~~i~~~~~~~~~v~i~Gv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~iiiG~~lA~~L~l~ 163 (270)
T Consensus 81 ~~~~~~pgv~~aaP~v~~~~lv~~-~~~~~~~~V~Gv~~~~~~~~~~~~~~~~~g~~~~f~~G~~~iiiG~~lA~~LgV~ 159 (414)
T TIGR02212 81 ETIEKNPGVKAAAPIVSGQALVQS-AGKVSGVQVRGVDPSDEDKLSAISNNVKQGALKKFKPGEYNIIIGEQLAEKLGVS 159 (414)
T ss_pred HHHHHCCCCEEEEEEEEEEEEEEE-CCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHCCCC
T ss_conf 999728980688546641489982-7834599985566033454555320102455445568852788715889845899
Q ss_pred CCCEEEECCCC-CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHCCCC-CCEEEEEEEECCHHHHHHHH
Q ss_conf 33202311344-21000122110000122102331024455516898548899971899-87107999956988999999
Q 537021.9.peg.7 164 IGDKINILSPY-GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241 (270)
Q Consensus 164 vGD~i~l~~~~-~~~~~~~~~~~~~~f~V~GI~~sg~~~~D~~~v~~~l~~~q~l~~~~-~~~~~i~i~l~d~~~~~~~~ 241 (270)
T Consensus 160 ~GD~~~li~p~~~~~t~~G~~P~~k~f~V~giF~~gm~e~D~~~~l~p~~dA~~f~~~~~~~v~g~~lk~~Dp~~a~~l~ 239 (414)
T TIGR02212 160 VGDKVTLISPENSNVTPFGEIPRQKRFTVIGIFSTGMGEVDGYLALMPLEDAQRFLRYGPDQVTGLRLKLDDPFQADALA 239 (414)
T ss_pred CCCEEEEEECCCCCCCEEECCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHH
T ss_conf 89779999828975210001450466899999970110320566750189999860899763306899823865315689
Q ss_pred HHHHHHCCCCEEEEEHHHHHHHHHHHHCC
Q ss_conf 99998619985999689988989998609
Q 537021.9.peg.7 242 ENIVRILGNGVVVIDWQQRYQIFFSCYES 270 (270)
Q Consensus 242 ~~i~~~l~~~~~v~~w~e~~~~lf~ai~~ 270 (270)
T Consensus 240 ~~~~~~~~-~~~~~dW~~~~g~~F~A~~~ 267 (414)
T TIGR02212 240 QQVQPELG-ELYVRDWRDQNGELFSAIQM 267 (414)
T ss_pred HHHHHHHC-CEEEECHHHHHHHHHHHHHH
T ss_conf 99988604-24320056653558999999