>TIGR03434 ADOP Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.

Probab=99.90 E-value=7.8e-23 Score=134.49 Aligned_cols=126 Identities=20% Similarity=0.309 Sum_probs=101.1 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 99999999999999999999999999999999980755222203688898765323345667887531000000001200 Q 537021.9.peg.7 3 VILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKFFL 82 (143) Q Consensus 3 ii~~~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~~~ 82 (143) T Consensus 276 ~~~~liLliA~iN~~NL~~ar~~~R~rEigirkalGA~r~ql~~q~l~Es~ll~~~a~~lgl~l~~~~~~~~~~~~~--- 352 (803) T TIGR03434 276 GAVGLVLLIACANVANLLLARAAARQREIAVRLALGAGRGRLVRQLLTESLLLALAGGALGLLLAYWGLRLLLALLP--- 352 (803) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--- T ss_conf 99999999999999999999999999999999997969899999999999999999999999999999999999742--- Q ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC Q ss_conf 026851368002233105704406999999999999999999999999829999998218 Q 537021.9.peg.7 83 HTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASRIDPVKVLRG 142 (143) Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~lr~ 142 (143) T Consensus 353 ~~~~~---------~--~~~~~~~~~l~~~~~~~l~~~llag~~PA~~~s~~~p~~~Lk~ 401 (803) T TIGR03434 353 ASLPR---------L--AEISLDGRVLLFALALSLLTGLLFGLAPALQATRSDLAEALKE 401 (803) T ss_pred HCCCC---------H--HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH T ss_conf 20431---------1--0046678999999999999999999999999816788999875

HHsearch alignment for GI: peg_789 and conserved domain: TIGR03434