RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= 537021.9.peg.80_1
         (37 letters)



>gnl|CDD|179938 PRK05105, PRK05105, O-succinylbenzoate synthase; Provisional.
          Length = 322

 Score = 24.4 bits (54), Expect = 7.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)

Query: 4   RKFTLLKAIGF 14
           R +TL KA  F
Sbjct: 166 RGWTLEKAQQF 176


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.337    0.147    0.433 

Gapped
Lambda     K      H
   0.267   0.0651    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 561,381
Number of extensions: 16390
Number of successful extensions: 56
Number of sequences better than 10.0: 1
Number of HSP's gapped: 56
Number of HSP's successfully gapped: 4
Length of query: 37
Length of database: 5,994,473
Length adjustment: 11
Effective length of query: 26
Effective length of database: 5,756,785
Effective search space: 149676410
Effective search space used: 149676410
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 50 (23.2 bits)