Query 537021.9.peg.804_1
Match_columns 39
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 33803
Date Tue May 24 23:32:13 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_804.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2v6e_A Protelemorase; hairpin 6.7 1.3E+02 0.0039 14.0 0.2 18 8-25 6-23 (121)
2 >1w96_A ACC, acetyl-coenzyme A 5.9 2.5E+02 0.0073 12.6 1.3 24 15-38 16-39 (66)
3 >1ehi_A LMDDL2, D-alanine:D-la 5.8 2.5E+02 0.0075 12.5 1.3 27 12-38 20-46 (71)
4 >2pvp_A D-alanine-D-alanine li 4.9 2.9E+02 0.0086 12.2 1.4 27 12-38 17-43 (67)
5 >1kzy_C Tumor suppressor P53-b 4.6 3.1E+02 0.009 12.1 1.7 17 4-20 19-35 (80)
6 >2e7j_A SEP-tRNA:Cys-tRNA synt 4.6 1.5E+02 0.0045 13.6 -0.5 15 7-21 47-61 (66)
7 >3hun_A Penicillin-binding pro 4.1 2.2E+02 0.0066 12.8 0.0 23 1-23 22-47 (221)
8 >2i3o_A Gamma-glutamyltransfer 3.9 3.5E+02 0.01 11.8 1.5 16 2-17 29-44 (61)
9 >1odo_A Putative cytochrome P4 3.5 3.8E+02 0.011 11.6 0.8 13 6-18 70-82 (83)
10 >1r4p_B Sltii B subunit, shiga 3.4 3.5E+02 0.01 11.8 0.5 6 24-29 52-57 (70)
No 1
>>2v6e_A Protelemorase; hairpin telomere, hydrolase, resolvase, protelomerase, DNA distortion; 3.20A {Klebsiella phage PHIKO2} (A:101-221)
Probab=6.74 E-value=1.3e+02 Score=13.96 Aligned_cols=18 Identities=17% Similarity=0.381 Sum_probs=13.7
Q ss_pred HHHHHHHHHCCCCCEEEC
Q ss_conf 999999981884003423
Q 537021.9.peg.8 8 GLSIILMIAGYPAFAYKT 25 (39)
Q Consensus 8 glsiilmiagypafaykt 25 (39)
.-||+-|-.-||+|+|--
T Consensus 6 ~~sI~~lsnKYPl~se~l 23 (121)
T 2v6e_A 6 EKNVIKLSEKYPLYSEEL 23 (121)
T ss_dssp HHHHHHHHHHCSTTHHHH
T ss_pred HHHHHHHHHCCCHHHHHH
T ss_conf 889999985071489998
No 2
>>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} (A:217-282)
Probab=5.93 E-value=2.5e+02 Score=12.56 Aligned_cols=24 Identities=17% Similarity=0.335 Sum_probs=19.7
Q ss_pred HHCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 818840034236323322464346
Q 537021.9.peg.8 15 IAGYPAFAYKTNTCHGYGTHGCKN 38 (39)
Q Consensus 15 iagypafayktntchgygthgckn 38 (39)
--|||...--++...|.|..-|++
T Consensus 16 ~ig~PvVvKP~~~~gs~gv~~v~~ 39 (66)
T 1w96_A 16 RIGFPVMIKASEGGGGKGIRQVER 39 (66)
T ss_dssp HHCSSEEEEETTCCTTTTEEEECS
T ss_pred HCCCCEEEEECCCCCCCEEEEECC
T ss_conf 569878986235567852589737
No 3
>>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} (A:150-220)
Probab=5.80 E-value=2.5e+02 Score=12.52 Aligned_cols=27 Identities=22% Similarity=0.233 Sum_probs=21.2
Q ss_pred HHHHHCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 999818840034236323322464346
Q 537021.9.peg.8 12 ILMIAGYPAFAYKTNTCHGYGTHGCKN 38 (39)
Q Consensus 12 ilmiagypafayktntchgygthgckn 38 (39)
+.---|||.+.--.+...|.|..-|+|
T Consensus 20 ~~~~lg~PvvvKP~~~~~s~Gv~~v~~ 46 (71)
T 1ehi_A 20 IVAELGNIVFVKAANQGSSVGISRVTN 46 (71)
T ss_dssp HHHHHCSCEEEEESSCCTTTTEEEECS
T ss_pred HHHHHCCCEEEECCCCCCCCCCEEECC
T ss_conf 999729924981687898888558668
No 4
>>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori SS1} (A:164-230)
Probab=4.93 E-value=2.9e+02 Score=12.21 Aligned_cols=27 Identities=22% Similarity=0.265 Sum_probs=21.5
Q ss_pred HHHHHCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 999818840034236323322464346
Q 537021.9.peg.8 12 ILMIAGYPAFAYKTNTCHGYGTHGCKN 38 (39)
Q Consensus 12 ilmiagypafayktntchgygthgckn 38 (39)
+.-.-|||.+.--.+...|-|..-|+|
T Consensus 17 ~~~~~g~PvvvKP~~~~~s~Gv~~v~~ 43 (67)
T 2pvp_A 17 DLMNFNFPFIVKPSNAGSSLGVNVVKE 43 (67)
T ss_dssp HHCCSCSCEEEEESSCCTTTTCEEESS
T ss_pred HHCCCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 531368976987402266753311332
No 5
>>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} (C:152-231)
Probab=4.62 E-value=3.1e+02 Score=12.09 Aligned_cols=17 Identities=41% Similarity=0.440 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHCCCC
Q ss_conf 67789999999818840
Q 537021.9.peg.8 4 NFFLGLSIILMIAGYPA 20 (39)
Q Consensus 4 nfflglsiilmiagypa 20 (39)
||.---+-|||++|--.
T Consensus 19 ~f~elW~eiLm~gGa~s 35 (80)
T 1kzy_C 19 NFLELWSEILMTGGAAS 35 (80)
T ss_dssp TTHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHCCCEE
T ss_conf 37999999999879989
No 6
>>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics, NPPSFA; HET: PLP; 2.40A {Archaeoglobus fulgidus} (A:19-42,A:228-269)
Probab=4.60 E-value=1.5e+02 Score=13.62 Aligned_cols=15 Identities=33% Similarity=0.700 Sum_probs=10.3
Q ss_pred HHHHHHHHHHCCCCC
Q ss_conf 899999998188400
Q 537021.9.peg.8 7 LGLSIILMIAGYPAF 21 (39)
Q Consensus 7 lglsiilmiagypaf 21 (39)
.|..|+-|+|.+|..
T Consensus 47 ~G~~i~tlmASFP~V 61 (66)
T 2e7j_A 47 RGATIITLMASFPHV 61 (66)
T ss_dssp CSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 035689999999999
No 7
>>3hun_A Penicillin-binding protein 4; ampicillin, beta-lactamase, serine type D-Ala, D-Ala-carboxypeptidase, hydrolase; HET: ZZ7; 2.00A {Staphylococcus aureus} PDB: 3hum_A* (A:1-94,A:210-336)
Probab=4.10 E-value=2.2e+02 Score=12.81 Aligned_cols=23 Identities=22% Similarity=0.135 Sum_probs=14.4
Q ss_pred CHHHHHHHHHHHHH---HHCCCCCEE
Q ss_conf 90467789999999---818840034
Q 537021.9.peg.8 1 MFRNFFLGLSIILM---IAGYPAFAY 23 (39)
Q Consensus 1 mfrnfflglsiilm---iagypafay 23 (39)
||+.+|....+|++ +--..++|-
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~a~ 47 (221)
T 3hun_A 22 AMKNLISIIIILCLTLSIMTPYAQAT 47 (221)
T ss_dssp -------------------------C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 19999999999999999731676640
No 8
>>2i3o_A Gamma-glutamyltransferase related protein; structural genomics, PSI, protein structure initiative; 2.03A {Thermoplasma acidophilum} (A:128-141,A:186-232)
Probab=3.90 E-value=3.5e+02 Score=11.78 Aligned_cols=16 Identities=44% Similarity=0.767 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 0467789999999818
Q 537021.9.peg.8 2 FRNFFLGLSIILMIAG 17 (39)
Q Consensus 2 frnfflglsiilmiag 17 (39)
||.|+-|--.-..|||
T Consensus 29 frsfydgsladiiiag 44 (61)
T 2i3o_A 29 FRSFYDGSLADIIIAG 44 (61)
T ss_dssp TTHHHHSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 4665421566543102
No 9
>>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} (A:163-245)
Probab=3.52 E-value=3.8e+02 Score=11.64 Aligned_cols=13 Identities=23% Similarity=0.575 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 7899999998188
Q 537021.9.peg.8 6 FLGLSIILMIAGY 18 (39)
Q Consensus 6 flglsiilmiagy 18 (39)
..+..+.+++||+
T Consensus 70 i~~~~~~ll~AG~ 82 (83)
T 1odo_A 70 LRDTLLLMISAGY 82 (83)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999986364
No 10
>>1r4p_B Sltii B subunit, shiga-like toxin type II B subunit; AB5 toxin; HET: 1PS; 1.77A {Escherichia coli} (B:)
Probab=3.42 E-value=3.5e+02 Score=11.79 Aligned_cols=6 Identities=50% Similarity=1.110 Sum_probs=0.0
Q ss_pred ECCCCC
Q ss_conf 236323
Q 537021.9.peg.8 24 KTNTCH 29 (39)
Q Consensus 24 ktntch 29 (39)
|+||||
T Consensus 52 ksntc~ 57 (70)
T 1r4p_B 52 KSSTCE 57 (70)
T ss_dssp ECSCCC
T ss_pred EECCCC
T ss_conf 842225
Done!