RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= 537021.9.peg.813_1 (41 letters) >gnl|CDD|38837 KOG3631, KOG3631, KOG3631, Alpha-parvin and related focal adhesion proteins [Cytoskeleton]. Length = 365 Score = 26.5 bits (58), Expect = 1.6 Identities = 10/35 (28%), Positives = 16/35 (45%) Query: 4 TNISGNHPFNAKIRIFSFVPPKASHHKSIFFSFVN 38 T++ G +A +F P K + K +FVN Sbjct: 233 TDLDGRPERDAFDTLFDHAPDKLNVVKKSLITFVN 267 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.331 0.140 0.443 Gapped Lambda K H 0.267 0.0559 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 524,730 Number of extensions: 15410 Number of successful extensions: 51 Number of sequences better than 10.0: 1 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 2 Length of query: 41 Length of database: 6,263,737 Length adjustment: 15 Effective length of query: 26 Effective length of database: 5,939,602 Effective search space: 154429652 Effective search space used: 154429652 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (22.0 bits) S2: 51 (23.8 bits)