HHSEARCH alignment of GI: peg_816 and SCOP domain: d1oi0a_

Alignment
>d1oi0a_ c.97.3.1 (A:) Hypothetical protein AF2198 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.82  E-value=0.0041  Score=37.07  Aligned_cols=51  Identities=24%  Similarity=0.425  Sum_probs=38.4

Q ss_pred             HHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEC----CCCEEEHHHCC
Q ss_conf             97319689999556898988147789999999999976498899799985----99599745258
Q 537021.9.peg.8   35 LELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIG----KDAFVSFKGLR   95 (97)
Q Consensus        35 l~~~A~~vilaHNHPsG~~~PS~~Di~~T~~l~~a~~~l~i~llDHiIv~----~~~~~S~re~g   95 (97)
                      ...+-.-+-+.|-||+|.+.||+.|++.-       +..|+   =|+|++    .++|-.|+..|
T Consensus        59 ~~~~~~ivgi~HSHP~~~a~PS~~D~~~~-------~~~g~---~~~Ivs~p~~~~~~~~~~~~G  113 (121)
T d1oi0a_          59 LPIGMKVFGTVHSHPSPSCRPSEEDLSLF-------TRFGK---YHIIVCYPYDENSWKCYNRKG  113 (121)
T ss_dssp             --CCCEEEEEEEEESSSCCSCCHHHHHHH-------HHSCS---EEEEEETTCCTTCEEEEETTS
T ss_pred             HHCCCEEEEEEEECCCCCCCCCHHHHHHH-------HCCCC---EEEEEECCCCCCCEEEEECCC
T ss_conf             31587699999726899997698999742-------50698---899996788988899994898


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: JAB1/MPN domain
family: JAB1/MPN domain
domain: Hypothetical protein AF2198
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]