BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 537021.9.peg.816_1
         (97 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|315122683|ref|YP_004063172.1| DNA repair protein RadC [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496085|gb|ADR52684.1| DNA repair protein RadC [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 237

 Score =  177 bits (449), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 84/97 (86%), Positives = 92/97 (94%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+KH++LIADE+QSRGTIDHVPVY+REIV RCLELSA+SIILVHNHPSGNPNPS+ADI
Sbjct: 141 LFLNKHDVLIADEIQSRGTIDHVPVYLREIVYRCLELSASSIILVHNHPSGNPNPSNADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MTQNII+TL PLNI VHDHIIIGKD FVSFKGLRII
Sbjct: 201 GMTQNIISTLTPLNITVHDHIIIGKDEFVSFKGLRII 237


>gi|159184835|ref|NP_354601.2| DNA repair protein RadC [Agrobacterium tumefaciens str. C58]
 gi|25009015|sp|Q8UEZ6|Y1607_AGRT5 RecName: Full=UPF0758 protein Atu1607
 gi|159140119|gb|AAK87386.2| DNA repair protein [Agrobacterium tumefaciens str. C58]
          Length = 280

 Score =  150 bits (379), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ +GT+DH PVY REIV+R LELS+T++IL+HNHPSG+P PS ADI
Sbjct: 184 LFLDKRNVLIADEVQGQGTVDHTPVYPREIVRRALELSSTALILIHNHPSGDPTPSRADI 243

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II T  PL I VHDHIIIGKD   SFKGLR+I
Sbjct: 244 EMTKTIIDTAKPLGITVHDHIIIGKDGHASFKGLRLI 280


>gi|325292997|ref|YP_004278861.1| DNA repair protein RadC [Agrobacterium sp. H13-3]
 gi|325060850|gb|ADY64541.1| DNA repair protein RadC [Agrobacterium sp. H13-3]
          Length = 281

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 68/97 (70%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ +GT+DH PVY RE+V+R LELS+T++IL+HNHPSG+P PS ADI
Sbjct: 185 LFLDKRNVLIADEVQGQGTVDHTPVYPREVVRRALELSSTALILIHNHPSGDPTPSRADI 244

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II T  PL I VHDHIIIGKD   SFKGLR+I
Sbjct: 245 EMTKTIIDTAKPLGIAVHDHIIIGKDGHASFKGLRLI 281


>gi|170744786|ref|YP_001773441.1| DNA repair protein RadC [Methylobacterium sp. 4-46]
 gi|168199060|gb|ACA21007.1| DNA repair protein RadC [Methylobacterium sp. 4-46]
          Length = 247

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 81/97 (83%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P+PS ADI
Sbjct: 151 LFLDKRNRLIADEVQGRGTVDHTPVYPREVVRRALELSATALILVHNHPSGDPSPSQADI 210

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++I+    PL I+VHDHII+G+D   SFKGL++I
Sbjct: 211 RMTRDIVGAAEPLGIVVHDHIIVGRDGHASFKGLKLI 247


>gi|222148674|ref|YP_002549631.1| DNA repair protein RadC [Agrobacterium vitis S4]
 gi|221735660|gb|ACM36623.1| DNA repair protein [Agrobacterium vitis S4]
          Length = 278

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 182 LFLDKRNTLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 241

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II T  PL I VHDH+IIGK    S KGLR+I
Sbjct: 242 EMTKTIIDTAKPLGITVHDHVIIGKQGHASLKGLRLI 278


>gi|220927247|ref|YP_002502549.1| DNA repair protein RadC [Methylobacterium nodulans ORS 2060]
 gi|219951854|gb|ACL62246.1| DNA repair protein RadC [Methylobacterium nodulans ORS 2060]
          Length = 242

 Score =  147 bits (370), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 64/97 (65%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 146 LFLDKRNRLIADEVQGRGTVDHTPVYPREVVRRALELSATALILVHNHPSGDPTPSQADI 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++I+    PL I+VHDHI++G++   SFKGL++I
Sbjct: 206 RMTRDIVGAAEPLGIVVHDHIVVGREGHASFKGLKLI 242


>gi|86357475|ref|YP_469367.1| DNA repair protein RadC [Rhizobium etli CFN 42]
 gi|123512146|sp|Q2K946|Y1848_RHIEC RecName: Full=UPF0758 protein RHE_CH01848
 gi|86281577|gb|ABC90640.1| DNA repair protein [Rhizobium etli CFN 42]
          Length = 274

 Score =  146 bits (369), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274


>gi|90419162|ref|ZP_01227072.1| DNA repair protein [Aurantimonas manganoxydans SI85-9A1]
 gi|90336099|gb|EAS49840.1| DNA repair protein [Aurantimonas manganoxydans SI85-9A1]
          Length = 257

 Score =  146 bits (369), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 161 LFLDKKNALIADEVQGTGTVDHTPVYTREVVKRGLELSATAIILVHNHPSGDPTPSRADI 220

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II T  PL I VHDHIIIGK+   S KGLR+I
Sbjct: 221 EMTRTIIDTAKPLGIAVHDHIIIGKNGHASLKGLRLI 257


>gi|218510678|ref|ZP_03508556.1| DNA repair protein RadC [Rhizobium etli Brasil 5]
          Length = 274

 Score =  146 bits (368), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274


>gi|190891537|ref|YP_001978079.1| DNA repair protein [Rhizobium etli CIAT 652]
 gi|226736627|sp|B3PXW5|Y1935_RHIE6 RecName: Full=UPF0758 protein RHECIAT_CH0001935
 gi|190696816|gb|ACE90901.1| DNA repair protein [Rhizobium etli CIAT 652]
          Length = 274

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274


>gi|218672510|ref|ZP_03522179.1| DNA repair protein RadC [Rhizobium etli GR56]
          Length = 274

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274


>gi|218515385|ref|ZP_03512225.1| DNA repair protein RadC [Rhizobium etli 8C-3]
          Length = 274

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274


>gi|209549111|ref|YP_002281028.1| DNA repair protein RadC [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226736629|sp|B5ZMI0|Y1511_RHILW RecName: Full=UPF0758 protein Rleg2_1511
 gi|209534867|gb|ACI54802.1| DNA repair protein RadC [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 275

 Score =  145 bits (367), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/97 (69%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 179 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAMILVHNHPSGDPTPSRADI 238

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDH+IIGKD  VS KGL++I
Sbjct: 239 DMTKVIIEAAKALDITVHDHVIIGKDGHVSLKGLKLI 275


>gi|116251828|ref|YP_767666.1| DNA repair protein RadC [Rhizobium leguminosarum bv. viciae 3841]
 gi|226736628|sp|Q1MHK3|Y2068_RHIL3 RecName: Full=UPF0758 protein RL2068
 gi|115256476|emb|CAK07560.1| putative DNA repair protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 275

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/97 (69%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+++LVHNHPSG+P PS ADI
Sbjct: 179 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAMVLVHNHPSGDPTPSRADI 238

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 239 DMTKVIIDAAKALDITVHDHIIIGKDGHVSLKGLKLI 275


>gi|188581415|ref|YP_001924860.1| DNA repair protein RadC [Methylobacterium populi BJ001]
 gi|179344913|gb|ACB80325.1| DNA repair protein RadC [Methylobacterium populi BJ001]
          Length = 246

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 62/97 (63%), Positives = 79/97 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ RGT+DH PVY RE+ +R LEL+AT+IIL HNHPSG+P PS ADI
Sbjct: 150 LFLDRRNHLIADEVQGRGTVDHTPVYPREVARRALELAATAIILAHNHPSGDPTPSGADI 209

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I++ L+PL I+VHDH+I+G+D   S KGL++I
Sbjct: 210 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 246


>gi|241204438|ref|YP_002975534.1| DNA repair protein RadC [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858328|gb|ACS55995.1| DNA repair protein RadC [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 275

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/97 (69%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 179 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATALILVHNHPSGDPTPSRADI 238

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDH+IIGKD  VS KGL++I
Sbjct: 239 DMTKVIIDAAKALDITVHDHVIIGKDGHVSLKGLKLI 275


>gi|218682712|ref|ZP_03530313.1| DNA repair protein RadC [Rhizobium etli CIAT 894]
          Length = 278

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 182 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAMILVHNHPSGDPTPSRADI 241

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDH+IIGKD  VS KGL+++
Sbjct: 242 DMTKVIIDAAKALDITVHDHVIIGKDGHVSLKGLKLM 278


>gi|327192095|gb|EGE59073.1| DNA repair protein RadC [Rhizobium etli CNPAF512]
          Length = 274

 Score =  144 bits (362), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/97 (70%), Positives = 79/97 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEV  RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 178 LFLDKRNVLIADEVHGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274


>gi|254561399|ref|YP_003068494.1| DNA repair protein RadC [Methylobacterium extorquens DM4]
 gi|254268677|emb|CAX24636.1| DNA repair protein RadC [Methylobacterium extorquens DM4]
          Length = 248

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 61/97 (62%), Positives = 79/97 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ RGT+DH PVY RE+ +R LEL++T+IIL HNHPSG+P PS ADI
Sbjct: 152 LFLDRRNHLIADEVQGRGTVDHTPVYPREVARRALELASTAIILAHNHPSGDPAPSGADI 211

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I++ L+PL I+VHDH+I+G+D   S KGL++I
Sbjct: 212 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 248


>gi|163851630|ref|YP_001639673.1| DNA repair protein RadC [Methylobacterium extorquens PA1]
 gi|163663235|gb|ABY30602.1| DNA repair protein RadC [Methylobacterium extorquens PA1]
          Length = 248

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 61/97 (62%), Positives = 79/97 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ RGT+DH PVY RE+ +R LEL++T+IIL HNHPSG+P PS ADI
Sbjct: 152 LFLDRRNHLIADEVQGRGTVDHTPVYPREVARRALELASTAIILAHNHPSGDPAPSGADI 211

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I++ L+PL I+VHDH+I+G+D   S KGL++I
Sbjct: 212 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 248


>gi|163759426|ref|ZP_02166511.1| DNA repair protein RadC [Hoeflea phototrophica DFL-43]
 gi|162283023|gb|EDQ33309.1| DNA repair protein RadC [Hoeflea phototrophica DFL-43]
          Length = 290

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 194 LFLDKKNALIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 253

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II T  PL I VHDHIIIG+D   S KG++++
Sbjct: 254 EMTKLIIETARPLGITVHDHIIIGRDGHASLKGMKLV 290


>gi|328543235|ref|YP_004303344.1| DNA repair protein RadC [Polymorphum gilvum SL003B-26A1]
 gi|326412981|gb|ADZ70044.1| DNA repair protein RadC [Polymorphum gilvum SL003B-26A1]
          Length = 236

 Score =  142 bits (358), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/97 (65%), Positives = 79/97 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY RE+++R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 140 LFLDKRNGLIADEVQQRGTVDHTPVYPREVIRRALELSATAVILVHNHPSGDPTPSRADI 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I+    PL I VHDHII+G++  VSF+GL++I
Sbjct: 200 QMTRQIVDIAKPLGIEVHDHIIVGREGQVSFRGLQLI 236


>gi|227821958|ref|YP_002825929.1| DNA repair protein RadC [Sinorhizobium fredii NGR234]
 gi|254789656|sp|C3MBW4|Y1397_RHISN RecName: Full=UPF0758 protein NGR_c13970
 gi|227340958|gb|ACP25176.1| DNA repair protein RadC [Sinorhizobium fredii NGR234]
          Length = 263

 Score =  142 bits (358), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ +GTIDH PVY RE+V+R LELSAT++IL HNHPSG+P PS ADI
Sbjct: 167 LFLDKRNALIADEVQQQGTIDHTPVYPREVVKRALELSATALILAHNHPSGDPTPSRADI 226

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I     PL I VHDH+IIGKD  VS KGLR+ 
Sbjct: 227 EMTKLIAEAAKPLGITVHDHVIIGKDGHVSMKGLRLF 263


>gi|300024876|ref|YP_003757487.1| DNA repair protein RadC [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526697|gb|ADJ25166.1| DNA repair protein RadC [Hyphomicrobium denitrificans ATCC 51888]
          Length = 254

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY+RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 158 LFLDKKNALIADEVQGRGTVDHTPVYVREVVKRALELSATAIILVHNHPSGDPTPSRADI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ II    PL + VHDH+I+G+    S K LR+I
Sbjct: 218 DVTKQIIDAAKPLGVTVHDHVIVGRHGHASLKALRLI 254


>gi|15965481|ref|NP_385834.1| DNA repair protein RadC [Sinorhizobium meliloti 1021]
 gi|307302602|ref|ZP_07582358.1| DNA repair protein RadC [Sinorhizobium meliloti BL225C]
 gi|307318449|ref|ZP_07597883.1| DNA repair protein RadC [Sinorhizobium meliloti AK83]
 gi|25009036|sp|Q92PL6|Y1728_RHIME RecName: Full=UPF0758 protein R01728
 gi|15074662|emb|CAC46307.1| Probable DNA repair protein [Sinorhizobium meliloti 1021]
 gi|306895789|gb|EFN26541.1| DNA repair protein RadC [Sinorhizobium meliloti AK83]
 gi|306902966|gb|EFN33557.1| DNA repair protein RadC [Sinorhizobium meliloti BL225C]
          Length = 262

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ +GTIDH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 166 LFLDKRNTLIADEVQQQGTIDHTPVYPREVVKRALELSATALILVHNHPSGDPTPSRADI 225

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ I     PL I +HDH+IIGKD  VS KGLR+ 
Sbjct: 226 DMTKLIAEAAKPLGIALHDHVIIGKDGHVSLKGLRLF 262


>gi|218530437|ref|YP_002421253.1| DNA repair protein RadC [Methylobacterium chloromethanicum CM4]
 gi|218522740|gb|ACK83325.1| DNA repair protein RadC [Methylobacterium chloromethanicum CM4]
          Length = 248

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 61/97 (62%), Positives = 79/97 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ RGT+DH PVY R + +R LEL++T+IILVHNHPSG+P PS ADI
Sbjct: 152 LFLDRRNHLIADEVQGRGTVDHTPVYPRGVARRALELASTAIILVHNHPSGDPAPSKADI 211

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I++ L+PL I+VHDH+I+G+D   S KGL++I
Sbjct: 212 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 248


>gi|170747019|ref|YP_001753279.1| DNA repair protein RadC [Methylobacterium radiotolerans JCM 2831]
 gi|170653541|gb|ACB22596.1| DNA repair protein RadC [Methylobacterium radiotolerans JCM 2831]
          Length = 248

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 62/97 (63%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY RE+ +R LELSAT+IIL HNHPSG+P PS AD+
Sbjct: 152 LFLDKRNHLIADEVQGRGTVDHTPVYPREVARRALELSATAIILAHNHPSGDPAPSAADV 211

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I+  L PL I+VHDH+I+G++   S KGL++I
Sbjct: 212 AMTREIVAVLAPLKIVVHDHVILGRNGHASLKGLKLI 248


>gi|114704379|ref|ZP_01437287.1| DNA repair protein RadC [Fulvimarina pelagi HTCC2506]
 gi|114539164|gb|EAU42284.1| DNA repair protein RadC [Fulvimarina pelagi HTCC2506]
          Length = 252

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 78/97 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY RE+V+R LEL+AT++ILVHNHPSG+P PS ADI
Sbjct: 156 LFLDKKNALIADEVQGRGTVDHTPVYPREVVRRALELNATALILVHNHPSGDPTPSRADI 215

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I TT  PL I +HDH+I+GK+   S +GL++I
Sbjct: 216 EMTRMIETTAKPLGISLHDHVIVGKNGHASLRGLKLI 252


>gi|85713454|ref|ZP_01044444.1| DNA repair protein RadC [Nitrobacter sp. Nb-311A]
 gi|85699358|gb|EAQ37225.1| DNA repair protein RadC [Nitrobacter sp. Nb-311A]
          Length = 236

 Score =  139 bits (351), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 78/97 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+II+VHNHPSG+P PS ADI
Sbjct: 140 LFLDKRNQLIADEVQQVGTVDHTPVYPREVVKRALELSATAIIMVHNHPSGDPTPSQADI 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++II   +PL I VHDHII+GK+   S KGLR+I
Sbjct: 200 QMTRSIIDISSPLGISVHDHIIVGKNGHASLKGLRLI 236


>gi|240138796|ref|YP_002963269.1| DNA repair protein RadC [Methylobacterium extorquens AM1]
 gi|240008766|gb|ACS39992.1| DNA repair protein RadC [Methylobacterium extorquens AM1]
          Length = 248

 Score =  139 bits (351), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 60/97 (61%), Positives = 78/97 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEV  RGT+DH PVY RE+ +R LEL++T+IIL HNHPSG+P PS ADI
Sbjct: 152 LFLDRRNHLIADEVLGRGTVDHTPVYPREVARRALELASTAIILAHNHPSGDPAPSKADI 211

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I++ L+PL I+VHDH+I+G+D   S KGL++I
Sbjct: 212 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 248


>gi|192288820|ref|YP_001989425.1| DNA repair protein RadC [Rhodopseudomonas palustris TIE-1]
 gi|192282569|gb|ACE98949.1| DNA repair protein RadC [Rhodopseudomonas palustris TIE-1]
          Length = 239

 Score =  139 bits (351), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 64/97 (65%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI
Sbjct: 143 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRGLELSATAVIMVHNHPSGDPTPSQADI 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++I+    PL I VHDHII+GK+   S KGLR+I
Sbjct: 203 QMTKSIVAIAEPLGIAVHDHIIVGKNGHASLKGLRLI 239


>gi|39933462|ref|NP_945738.1| DNA repair protein RadC [Rhodopseudomonas palustris CGA009]
 gi|39647308|emb|CAE25829.1| possible DNA repair protein RadC [Rhodopseudomonas palustris
           CGA009]
          Length = 241

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/97 (65%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI
Sbjct: 145 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRGLELSATAVIMVHNHPSGDPTPSQADI 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++I+    PL I VHDHII+GK+   S KGLR+I
Sbjct: 205 QMTKSIVAIAEPLGIAVHDHIIVGKNGHASLKGLRLI 241


>gi|316931615|ref|YP_004106597.1| DNA repair protein RadC [Rhodopseudomonas palustris DX-1]
 gi|315599329|gb|ADU41864.1| DNA repair protein RadC [Rhodopseudomonas palustris DX-1]
          Length = 237

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI
Sbjct: 141 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRGLELSATAVIMVHNHPSGDPTPSQADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++I+    PL I VHDHII+GK+   S KGL++I
Sbjct: 201 QMTKSIVAIAEPLGIAVHDHIIVGKNGHASLKGLKLI 237


>gi|150396672|ref|YP_001327139.1| DNA repair protein RadC [Sinorhizobium medicae WSM419]
 gi|226736631|sp|A6U9H4|Y1459_SINMW RecName: Full=UPF0758 protein Smed_1459
 gi|150028187|gb|ABR60304.1| DNA repair protein RadC [Sinorhizobium medicae WSM419]
          Length = 260

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/97 (67%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ +GTIDH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 164 LFLDKRNTLIADEVQQQGTIDHTPVYPREVVKRALELSATALILVHNHPSGDPTPSCADI 223

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I     PL I +HDH+IIGKD  VS KGL++ 
Sbjct: 224 EMTKLIAEAAKPLGIALHDHVIIGKDGHVSLKGLQLF 260


>gi|260459829|ref|ZP_05808083.1| DNA repair protein RadC [Mesorhizobium opportunistum WSM2075]
 gi|259034631|gb|EEW35888.1| DNA repair protein RadC [Mesorhizobium opportunistum WSM2075]
          Length = 253

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/97 (68%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI DEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 157 LFLDKKNTLIVDEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II T  PL I VHDHIIIG+    S KGL +I
Sbjct: 217 EMTKQIIDTAKPLGIAVHDHIIIGRKGHASMKGLLLI 253


>gi|75674533|ref|YP_316954.1| DNA repair protein RadC [Nitrobacter winogradskyi Nb-255]
 gi|74419403|gb|ABA03602.1| DNA repair protein RadC [Nitrobacter winogradskyi Nb-255]
          Length = 236

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/97 (67%), Positives = 78/97 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GTIDH PVY RE+V+R LELSAT+II+VHNHPSG+P PS ADI
Sbjct: 140 LFLDKRNQLIADEVQQVGTIDHTPVYPREVVKRALELSATAIIMVHNHPSGDPTPSQADI 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++I+   +PL I VHDHII+GK+   S KGLR++
Sbjct: 200 QMTKSIVDISSPLGISVHDHIIVGKNGHSSLKGLRLM 236


>gi|91974634|ref|YP_567293.1| DNA repair protein RadC [Rhodopseudomonas palustris BisB5]
 gi|91681090|gb|ABE37392.1| DNA repair protein RadC [Rhodopseudomonas palustris BisB5]
          Length = 239

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 62/97 (63%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI
Sbjct: 143 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQADI 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I+    PL + VHDHII+GK+   S KGL++I
Sbjct: 203 QMTRTIVAIAEPLGVSVHDHIIVGKNGHASLKGLKLI 239


>gi|153009239|ref|YP_001370454.1| DNA repair protein RadC [Ochrobactrum anthropi ATCC 49188]
 gi|229470322|sp|A6X071|Y1909_OCHA4 RecName: Full=UPF0758 protein Oant_1909
 gi|151561127|gb|ABS14625.1| DNA repair protein RadC [Ochrobactrum anthropi ATCC 49188]
          Length = 249

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     LNI VHDH+I+GK    SF+GL +I
Sbjct: 213 DMTKQLVNAAKALNITVHDHVIVGKHGHASFRGLGLI 249


>gi|115522133|ref|YP_779044.1| DNA repair protein RadC [Rhodopseudomonas palustris BisA53]
 gi|115516080|gb|ABJ04064.1| DNA repair protein RadC [Rhodopseudomonas palustris BisA53]
          Length = 238

 Score =  137 bits (346), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GTIDH PVY REIV+R LELSA++I++VHNHPSG+P PS +DI
Sbjct: 142 LFLDKRNQLIADELQQVGTIDHTPVYPREIVKRALELSASAIVMVHNHPSGDPTPSQSDI 201

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II   +PL I VHDHII+GK+   S KGL++I
Sbjct: 202 QMTKQIIAIADPLGIAVHDHIIVGKNGHASLKGLKLI 238


>gi|110633807|ref|YP_674015.1| DNA repair protein RadC [Mesorhizobium sp. BNC1]
 gi|110284791|gb|ABG62850.1| DNA repair protein RadC [Chelativorans sp. BNC1]
          Length = 251

 Score =  137 bits (346), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI DE Q  GT+DH PVY RE+V+R LELSA++IILVHNHPSG+P PS ADI
Sbjct: 155 LFLDKKNALIKDECQQTGTVDHTPVYPREVVKRALELSASAIILVHNHPSGDPTPSRADI 214

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I +T  PL I VHDHIIIGK    S KG+R+ 
Sbjct: 215 EMTKLIASTAEPLGITVHDHIIIGKKGHASMKGMRLF 251


>gi|86747826|ref|YP_484322.1| DNA repair protein RadC [Rhodopseudomonas palustris HaA2]
 gi|123004659|sp|Q2J299|Y700_RHOP2 RecName: Full=UPF0758 protein RPB_0700
 gi|86570854|gb|ABD05411.1| DNA repair protein RadC [Rhodopseudomonas palustris HaA2]
          Length = 250

 Score =  137 bits (345), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 61/97 (62%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI
Sbjct: 154 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQADI 213

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I+    PL + VHDHII+GK+   S KGL++ 
Sbjct: 214 QMTKTIVAIAEPLGVAVHDHIIVGKNGHASLKGLKLF 250


>gi|90422099|ref|YP_530469.1| DNA repair protein RadC [Rhodopseudomonas palustris BisB18]
 gi|90104113|gb|ABD86150.1| DNA repair protein RadC [Rhodopseudomonas palustris BisB18]
          Length = 242

 Score =  137 bits (345), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 65/97 (67%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GTIDH PVY REIV+R LELSAT+II+VHNHPSG+P PS +DI
Sbjct: 146 LFLDKRNQLIADELQQVGTIDHTPVYPREIVKRALELSATAIIMVHNHPSGDPTPSQSDI 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II    PL I VHDHII+GK    S KGL++I
Sbjct: 206 TMTKQIIDIAKPLGIAVHDHIIVGKHGHASLKGLKLI 242


>gi|319783917|ref|YP_004143393.1| DNA repair protein RadC [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169805|gb|ADV13343.1| DNA repair protein RadC [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 253

 Score =  136 bits (343), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 64/97 (65%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+++R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 157 LFLDKKNALIADEVQQTGTVDHTPVYPREVIKRALELSATAIILVHNHPSGDPTPSRADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II     L I VHDHIIIG+  + S KGL +I
Sbjct: 217 EMTKEIIDAGKRLGIAVHDHIIIGRKGYASMKGLLLI 253


>gi|254719330|ref|ZP_05181141.1| DNA repair protein RadC [Brucella sp. 83/13]
 gi|265984331|ref|ZP_06097066.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306839105|ref|ZP_07471922.1| DNA repair protein RadC [Brucella sp. NF 2653]
 gi|264662923|gb|EEZ33184.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306405652|gb|EFM61914.1| DNA repair protein RadC [Brucella sp. NF 2653]
          Length = 249

 Score =  136 bits (343), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     LNI VHDH+IIGK    S + LR+I
Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLRSLRLI 249


>gi|225852775|ref|YP_002733008.1| DNA repair protein RadC [Brucella melitensis ATCC 23457]
 gi|256263739|ref|ZP_05466271.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|254764429|sp|C0RJP6|Y1330_BRUMB RecName: Full=UPF0758 protein BMEA_A1330
 gi|225641140|gb|ACO01054.1| DNA repair protein RadC [Brucella melitensis ATCC 23457]
 gi|263093798|gb|EEZ17803.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|326409305|gb|ADZ66370.1| DNA repair protein RadC [Brucella melitensis M28]
 gi|326539014|gb|ADZ87229.1| DNA repair protein RadC [Brucella melitensis M5-90]
          Length = 249

 Score =  136 bits (343), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     LNI VHDH+IIGK    S + LR+I
Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLRSLRLI 249


>gi|17987001|ref|NP_539635.1| DNA repair protein RadC [Brucella melitensis bv. 1 str. 16M]
 gi|23502159|ref|NP_698286.1| DNA repair protein RadC [Brucella suis 1330]
 gi|62290189|ref|YP_221982.1| DNA repair protein RadC [Brucella abortus bv. 1 str. 9-941]
 gi|82700110|ref|YP_414684.1| DNA repair protein RadC [Brucella melitensis biovar Abortus 2308]
 gi|161619234|ref|YP_001593121.1| DNA repair protein RadC [Brucella canis ATCC 23365]
 gi|189024423|ref|YP_001935191.1| DNA repair protein RadC [Brucella abortus S19]
 gi|225627749|ref|ZP_03785786.1| DNA repair protein RadC [Brucella ceti str. Cudo]
 gi|237815696|ref|ZP_04594693.1| DNA repair protein RadC [Brucella abortus str. 2308 A]
 gi|254689493|ref|ZP_05152747.1| DNA repair protein RadC [Brucella abortus bv. 6 str. 870]
 gi|254693980|ref|ZP_05155808.1| DNA repair protein RadC [Brucella abortus bv. 3 str. Tulya]
 gi|254697631|ref|ZP_05159459.1| DNA repair protein RadC [Brucella abortus bv. 2 str. 86/8/59]
 gi|254702017|ref|ZP_05163845.1| DNA repair protein RadC [Brucella suis bv. 5 str. 513]
 gi|254704558|ref|ZP_05166386.1| DNA repair protein RadC [Brucella suis bv. 3 str. 686]
 gi|254710344|ref|ZP_05172155.1| DNA repair protein RadC [Brucella pinnipedialis B2/94]
 gi|254714340|ref|ZP_05176151.1| DNA repair protein RadC [Brucella ceti M644/93/1]
 gi|254717239|ref|ZP_05179050.1| DNA repair protein RadC [Brucella ceti M13/05/1]
 gi|254730521|ref|ZP_05189099.1| DNA repair protein RadC [Brucella abortus bv. 4 str. 292]
 gi|256031838|ref|ZP_05445452.1| DNA repair protein RadC [Brucella pinnipedialis M292/94/1]
 gi|256044923|ref|ZP_05447826.1| DNA repair protein RadC [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061358|ref|ZP_05451502.1| DNA repair protein RadC [Brucella neotomae 5K33]
 gi|256113838|ref|ZP_05454631.1| DNA repair protein RadC [Brucella melitensis bv. 3 str. Ether]
 gi|256257741|ref|ZP_05463277.1| DNA repair protein RadC [Brucella abortus bv. 9 str. C68]
 gi|256369702|ref|YP_003107212.1| DNA repair protein RadC [Brucella microti CCM 4915]
 gi|260168972|ref|ZP_05755783.1| DNA repair protein RadC [Brucella sp. F5/99]
 gi|260546732|ref|ZP_05822471.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260565477|ref|ZP_05835961.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260566199|ref|ZP_05836669.1| DNA repair protein RadC [Brucella suis bv. 4 str. 40]
 gi|260755015|ref|ZP_05867363.1| DNA repair protein RadC [Brucella abortus bv. 6 str. 870]
 gi|260758231|ref|ZP_05870579.1| DNA repair protein RadC [Brucella abortus bv. 4 str. 292]
 gi|260762058|ref|ZP_05874401.1| DNA repair protein RadC [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884026|ref|ZP_05895640.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261214271|ref|ZP_05928552.1| DNA repair protein RadC [Brucella abortus bv. 3 str. Tulya]
 gi|261219056|ref|ZP_05933337.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261317907|ref|ZP_05957104.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261322116|ref|ZP_05961313.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261325359|ref|ZP_05964556.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261752583|ref|ZP_05996292.1| DNA repair protein RadC [Brucella suis bv. 5 str. 513]
 gi|261755242|ref|ZP_05998951.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|261758465|ref|ZP_06002174.1| DNA repair protein RadC [Brucella sp. F5/99]
 gi|265988936|ref|ZP_06101493.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265991349|ref|ZP_06103906.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265995186|ref|ZP_06107743.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|294852618|ref|ZP_06793291.1| DNA repair protein radC [Brucella sp. NVSL 07-0026]
 gi|297248579|ref|ZP_06932297.1| DNA repair protein radC [Brucella abortus bv. 5 str. B3196]
 gi|306840253|ref|ZP_07473027.1| DNA repair protein RadC [Brucella sp. BO2]
 gi|306844186|ref|ZP_07476779.1| DNA repair protein RadC [Brucella sp. BO1]
 gi|54039000|sp|P65956|Y1283_BRUSU RecName: Full=UPF0758 protein BR1283
 gi|54041782|sp|P65955|Y718_BRUME RecName: Full=UPF0758 protein BMEI0718
 gi|73913733|sp|Q57CL3|Y1284_BRUAB RecName: Full=UPF0758 protein BruAb1_1284
 gi|123547434|sp|Q2YRF9|Y1301_BRUA2 RecName: Full=UPF0758 protein BAB1_1301
 gi|238687216|sp|A9M5U5|Y1306_BRUC2 RecName: Full=UPF0758 protein BCAN_A1306
 gi|238689385|sp|B2S6C0|Y1214_BRUA1 RecName: Full=UPF0758 protein BAbS19_I12140
 gi|17982652|gb|AAL51899.1| DNA repair protein radc homolog [Brucella melitensis bv. 1 str.
           16M]
 gi|23348123|gb|AAN30201.1| DNA repair protein RadC [Brucella suis 1330]
 gi|62196321|gb|AAX74621.1| RadC, DNA repair protein RadC [Brucella abortus bv. 1 str. 9-941]
 gi|82616211|emb|CAJ11257.1| DNA repair protein RadC [Brucella melitensis biovar Abortus 2308]
 gi|161336045|gb|ABX62350.1| DNA repair protein RadC [Brucella canis ATCC 23365]
 gi|189019995|gb|ACD72717.1| DNA repair protein RadC [Brucella abortus S19]
 gi|225617754|gb|EEH14799.1| DNA repair protein RadC [Brucella ceti str. Cudo]
 gi|237788994|gb|EEP63205.1| DNA repair protein RadC [Brucella abortus str. 2308 A]
 gi|255999864|gb|ACU48263.1| DNA repair protein RadC [Brucella microti CCM 4915]
 gi|260095782|gb|EEW79659.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260151545|gb|EEW86639.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260155717|gb|EEW90797.1| DNA repair protein RadC [Brucella suis bv. 4 str. 40]
 gi|260668549|gb|EEX55489.1| DNA repair protein RadC [Brucella abortus bv. 4 str. 292]
 gi|260672490|gb|EEX59311.1| DNA repair protein RadC [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675123|gb|EEX61944.1| DNA repair protein RadC [Brucella abortus bv. 6 str. 870]
 gi|260873554|gb|EEX80623.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260915878|gb|EEX82739.1| DNA repair protein RadC [Brucella abortus bv. 3 str. Tulya]
 gi|260924145|gb|EEX90713.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261294806|gb|EEX98302.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261297130|gb|EEY00627.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261301339|gb|EEY04836.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261738449|gb|EEY26445.1| DNA repair protein RadC [Brucella sp. F5/99]
 gi|261742336|gb|EEY30262.1| DNA repair protein RadC [Brucella suis bv. 5 str. 513]
 gi|261744995|gb|EEY32921.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262766299|gb|EEZ12088.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263002133|gb|EEZ14708.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|264661133|gb|EEZ31394.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|294821207|gb|EFG38206.1| DNA repair protein radC [Brucella sp. NVSL 07-0026]
 gi|297175748|gb|EFH35095.1| DNA repair protein radC [Brucella abortus bv. 5 str. B3196]
 gi|306275461|gb|EFM57198.1| DNA repair protein RadC [Brucella sp. BO1]
 gi|306289780|gb|EFM60962.1| DNA repair protein RadC [Brucella sp. BO2]
          Length = 249

 Score =  136 bits (343), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     LNI VHDH+IIGK    S + LR+I
Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLRSLRLI 249


>gi|92116052|ref|YP_575781.1| DNA repair protein RadC [Nitrobacter hamburgensis X14]
 gi|91798946|gb|ABE61321.1| DNA repair protein RadC [Nitrobacter hamburgensis X14]
          Length = 254

 Score =  136 bits (343), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 64/97 (65%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI DE+Q  GT+DH PVY RE+V+R LELSAT+II+VHNHPSG+P PS ADI
Sbjct: 158 LFLDKRNQLIVDELQQVGTVDHTPVYPREVVKRALELSATAIIMVHNHPSGDPTPSQADI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++II    PL I VHDHII+GK+   S KGLR+I
Sbjct: 218 QMTKSIIDISKPLGISVHDHIIVGKNGHASLKGLRLI 254


>gi|163843546|ref|YP_001627950.1| DNA repair protein RadC [Brucella suis ATCC 23445]
 gi|163674269|gb|ABY38380.1| DNA repair protein RadC [Brucella suis ATCC 23445]
          Length = 249

 Score =  136 bits (343), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     LNI VHDH+IIGK    S + LR+I
Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLRSLRLI 249


>gi|239832168|ref|ZP_04680497.1| DNA repair protein RadC [Ochrobactrum intermedium LMG 3301]
 gi|239824435|gb|EEQ96003.1| DNA repair protein RadC [Ochrobactrum intermedium LMG 3301]
          Length = 249

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/97 (62%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N +IADEVQ  GT+D+ PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKMIADEVQQTGTVDYTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     LNI VHDH+I+GK    SF+GL +I
Sbjct: 213 DMTRQLVNAAKALNITVHDHVIVGKHGHASFRGLGLI 249


>gi|323136973|ref|ZP_08072053.1| DNA repair protein RadC [Methylocystis sp. ATCC 49242]
 gi|322397734|gb|EFY00256.1| DNA repair protein RadC [Methylocystis sp. ATCC 49242]
          Length = 244

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 60/97 (61%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GTIDH PVY RE+V+R LEL A+++IL HNHPSG+P PS ADI
Sbjct: 148 LFLDKRNALIADEVQGVGTIDHTPVYPREVVRRALELGASALILAHNHPSGDPTPSAADI 207

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++II    P  I VHDH+I+G++   SF+GL++I
Sbjct: 208 RMTKDIIAIAQPFGIAVHDHLIVGRNGQASFRGLKLI 244


>gi|209966646|ref|YP_002299561.1| DNA repair protein RadC, putative [Rhodospirillum centenum SW]
 gi|209960112|gb|ACJ00749.1| DNA repair protein RadC, putative [Rhodospirillum centenum SW]
          Length = 259

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/97 (62%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ RGT+DH PVY RE+V+R LEL+AT++ILVHNHPSG+P PS ADI
Sbjct: 163 LFLDRKNTLIADEVQQRGTVDHTPVYPREVVKRALELNATALILVHNHPSGDPTPSRADI 222

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II     L ++VHDH+IIGK   VSFK + ++
Sbjct: 223 EMTKQIIQAATALGVVVHDHVIIGKGRHVSFKSIGLM 259


>gi|254470509|ref|ZP_05083913.1| DNA repair protein RadC [Pseudovibrio sp. JE062]
 gi|211960820|gb|EEA96016.1| DNA repair protein RadC [Pseudovibrio sp. JE062]
          Length = 275

 Score =  135 bits (341), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+ +R LELSA +IILVHNHPSG+P PS  DI
Sbjct: 179 LFLDKKNRLIADEVQQTGTVDHTPVYPREVTKRALELSACAIILVHNHPSGDPTPSRQDI 238

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I +TL PL I++HDHIII     VSF+GL++I
Sbjct: 239 EMTTKIASTLEPLGIVLHDHIIIAGSGHVSFRGLQLI 275


>gi|158425828|ref|YP_001527120.1| DNA repair protein RadC [Azorhizobium caulinodans ORS 571]
 gi|158332717|dbj|BAF90202.1| DNA repair protein [Azorhizobium caulinodans ORS 571]
          Length = 234

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 62/97 (63%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEV   GT+DH PVY RE+V+R LELSA+++IL HNHPSG+P PS ADI
Sbjct: 138 LFLDKRNQLIADEVVQTGTVDHAPVYPREVVKRALELSASALILCHNHPSGDPTPSRADI 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II    PL I +HDHII+GK+   S KGLR+I
Sbjct: 198 DMTRKIIDVAKPLGIELHDHIIVGKEGHASLKGLRLI 234


>gi|154253040|ref|YP_001413864.1| DNA repair protein RadC [Parvibaculum lavamentivorans DS-1]
 gi|154156990|gb|ABS64207.1| DNA repair protein RadC [Parvibaculum lavamentivorans DS-1]
          Length = 230

 Score =  134 bits (337), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADEVQ +GT+DH PVY RE+V+R LEL+A+++ILVHNHPSG+P PS AD+
Sbjct: 134 LFLDRKNVLIADEVQQKGTVDHTPVYPREVVKRALELNASALILVHNHPSGDPTPSTADV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I+ T  PL I VHDH+++GK    SF+ L +I
Sbjct: 194 EMTRQIVNTAKPLGIEVHDHLVVGKGRHASFRTLGLI 230


>gi|118593437|ref|ZP_01550817.1| DNA repair protein RadC [Stappia aggregata IAM 12614]
 gi|118433916|gb|EAV40574.1| DNA repair protein RadC [Stappia aggregata IAM 12614]
          Length = 237

 Score =  134 bits (336), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 62/97 (63%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+++R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 141 LFLDKKNALIADEVQQTGTVDHTPVYPREVIRRALELSATALILVHNHPSGDPTPSRADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I+    PL I VHDHII+G  + VSF+ L++I
Sbjct: 201 QMTKKIVDIAGPLGIEVHDHIIVGLRSNVSFRSLQLI 237


>gi|288957329|ref|YP_003447670.1| DNA repair protein [Azospirillum sp. B510]
 gi|288909637|dbj|BAI71126.1| DNA repair protein [Azospirillum sp. B510]
          Length = 249

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 59/98 (60%), Positives = 75/98 (76%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ RGTIDH PVY RE+V+R LELSA ++ILVHNHPSG+P PS ADI
Sbjct: 152 LFLDRRNTLIADEVQQRGTIDHTPVYPREVVKRALELSAAAVILVHNHPSGDPTPSRADI 211

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRII 97
            MT+ I+   N + +++HDH++IGK     SFK  R++
Sbjct: 212 EMTKEIVRAANAVGLVIHDHLVIGKGGRHTSFKAQRLL 249


>gi|254503230|ref|ZP_05115381.1| DNA repair protein RadC [Labrenzia alexandrii DFL-11]
 gi|222439301|gb|EEE45980.1| DNA repair protein RadC [Labrenzia alexandrii DFL-11]
          Length = 237

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 61/97 (62%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GT+DH PVY RE+V+R LE  AT+IILVHNHPSG+P PS ADI
Sbjct: 141 LFLDKKNGLIADELQQTGTVDHTPVYPREVVRRALEHGATAIILVHNHPSGDPTPSRADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ ++    PL I +HDHII+G  + VSFKGL++I
Sbjct: 201 QMTRQLVDIAKPLGIEIHDHIIVGLRSQVSFKGLQLI 237


>gi|146337832|ref|YP_001202880.1| DNA repair protein RadC [Bradyrhizobium sp. ORS278]
 gi|146190638|emb|CAL74640.1| DNA repair protein RadC homolog [Bradyrhizobium sp. ORS278]
          Length = 237

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 71/92 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+++R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 141 LFLDKRNQLIADEVQQTGTVDHTPVYPREVIKRALELSATAIILVHNHPSGDPTPSQADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT+ I+    PL I VHDHII+G++   S K
Sbjct: 201 RMTKTIVEIAKPLGITVHDHIIVGRNGHTSLK 232


>gi|254466524|ref|ZP_05079935.1| DNA repair protein RadC [Rhodobacterales bacterium Y4I]
 gi|206687432|gb|EDZ47914.1| DNA repair protein RadC [Rhodobacterales bacterium Y4I]
          Length = 254

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 74/93 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q+RGT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PSD+DI
Sbjct: 158 LFLDRKNVLIADEEQARGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSDSDI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  I+  L  L I +HDH+IIGK   +SF+ 
Sbjct: 218 GMTDQILAALTALGITLHDHLIIGKSTELSFRA 250


>gi|197104531|ref|YP_002129908.1| DNA repair protein [Phenylobacterium zucineum HLK1]
 gi|196477951|gb|ACG77479.1| DNA repair protein [Phenylobacterium zucineum HLK1]
          Length = 243

 Score =  130 bits (328), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N L+ADEV + GT+DH PVY RE+V+R LELSA+++ILVHNHPSG+P PS AD+
Sbjct: 147 LFLDKKNQLLADEVMNHGTVDHAPVYPREVVRRALELSASALILVHNHPSGDPTPSSADV 206

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     L I VHDH+++G+D   SFK L ++
Sbjct: 207 DMTRQVVDAARALRIAVHDHLVVGRDGVASFKALGLM 243


>gi|296444788|ref|ZP_06886751.1| DNA repair protein RadC [Methylosinus trichosporium OB3b]
 gi|296257736|gb|EFH04800.1| DNA repair protein RadC [Methylosinus trichosporium OB3b]
          Length = 241

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LEL +T++IL HNHPSG+P PS AD+
Sbjct: 145 LFLDKRNALIADEVQGVGTVDHTPVYPREVVRRALELGSTALILAHNHPSGDPTPSTADV 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT +II    P  I VHDH+I+G++   S KGL++I
Sbjct: 205 RMTLDIIAIAQPFGIAVHDHLIVGRNGHSSLKGLKLI 241


>gi|83858758|ref|ZP_00952280.1| DNA repair protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853581|gb|EAP91433.1| DNA repair protein [Oceanicaulis alexandrii HTCC2633]
          Length = 213

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 56/97 (57%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LDK N L+ADE Q+RGT+DH PVY RE+V+R L L A+++ILVHNHPSG+P PS ADI
Sbjct: 117 LYLDKKNRLVADEHQARGTVDHAPVYPREVVKRALALDASALILVHNHPSGDPTPSHADI 176

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +I+   P NI+VHDH++IG++   SFK L ++
Sbjct: 177 EMTKLVISAAKPFNIVVHDHLVIGRERTASFKSLGLL 213


>gi|307945547|ref|ZP_07660883.1| putative DNA repair RadC-like protein [Roseibium sp. TrichSKD4]
 gi|307771420|gb|EFO30645.1| putative DNA repair RadC-like protein [Roseibium sp. TrichSKD4]
          Length = 237

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+++R LEL +T+++L+HNHPSG+P PS ADI
Sbjct: 141 LFLDKKNGLIADEVQQEGTVDHTPVYPREVIRRALELQSTALVLIHNHPSGDPTPSRADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ ++    PL I +HDHII+ + A VSF+G++++
Sbjct: 201 QMTRQLVEIAKPLGIEIHDHIIVARGAHVSFRGMQLM 237


>gi|148560082|ref|YP_001259197.1| DNA repair protein RadC [Brucella ovis ATCC 25840]
 gi|254706546|ref|ZP_05168374.1| DNA repair protein RadC [Brucella pinnipedialis M163/99/10]
 gi|256160029|ref|ZP_05457727.1| DNA repair protein RadC [Brucella ceti M490/95/1]
 gi|256255238|ref|ZP_05460774.1| DNA repair protein RadC [Brucella ceti B1/94]
 gi|261222434|ref|ZP_05936715.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261314006|ref|ZP_05953203.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|265998402|ref|ZP_06110959.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|148371339|gb|ABQ61318.1| DNA repair protein RadC [Brucella ovis ATCC 25840]
 gi|260921018|gb|EEX87671.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261303032|gb|EEY06529.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|262553009|gb|EEZ08860.1| conserved hypothetical protein [Brucella ceti M490/95/1]
          Length = 246

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 60/92 (65%), Positives = 71/92 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MT+ ++     LNI VHDH+IIGK    S +
Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLR 244


>gi|302384219|ref|YP_003820042.1| DNA repair protein RadC [Brevundimonas subvibrioides ATCC 15264]
 gi|302194847|gb|ADL02419.1| DNA repair protein RadC [Brevundimonas subvibrioides ATCC 15264]
          Length = 249

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI DEVQ+RGT+DH PVY RE+V+R LE++A ++ILVHNHPSG+P PS ADI
Sbjct: 153 LYLDNRNQLILDEVQNRGTVDHAPVYPREVVRRGLEVNAKAMILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MTQ II    PLN+ VHDH+I+G++   SFK L ++
Sbjct: 213 DMTQQIIRAARPLNVEVHDHLIVGREGVTSFKQLGLM 249


>gi|254419835|ref|ZP_05033559.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
 gi|196186012|gb|EDX80988.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
          Length = 243

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 56/97 (57%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LDK N LI DEVQ+RGT+DH PVY RE+V+R LELSA+++ILVHNHPSG+P PS ADI
Sbjct: 147 LYLDKKNQLILDEVQNRGTVDHAPVYPREVVRRALELSASALILVHNHPSGDPTPSRADI 206

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     LN+ VHDH+++G+D   SFK L ++
Sbjct: 207 EITKQVVQAGRALNVEVHDHLVVGRDGVASFKQLGLM 243


>gi|329891298|ref|ZP_08269641.1| DNA repair protein RadC family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328846599|gb|EGF96163.1| DNA repair protein RadC family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 243

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LDK N LI DE+Q+RGT+DH PVY RE+V+R LELSA+++I+VHNHPSG+P PS ADI
Sbjct: 147 LYLDKKNQLILDEIQNRGTVDHAPVYPREVVRRALELSASAMIIVHNHPSGDPTPSRADI 206

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ +I     L++ VHDH+I+G++   SFK L ++
Sbjct: 207 DMTKQVIEAARALSVQVHDHLIVGREGVASFKQLGLM 243


>gi|77464752|ref|YP_354256.1| DNA repair protein RadC [Rhodobacter sphaeroides 2.4.1]
 gi|77389170|gb|ABA80355.1| DNA repair protein [Rhodobacter sphaeroides 2.4.1]
          Length = 254

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 75/93 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PSD D+
Sbjct: 158 LYLDRKNVLIADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSDQDV 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  I    + L I++HDH++IG+   VSF+G
Sbjct: 218 AMTAQIQEAASTLGIVLHDHLVIGRGREVSFRG 250


>gi|312113065|ref|YP_004010661.1| DNA repair protein RadC [Rhodomicrobium vannielii ATCC 17100]
 gi|311218194|gb|ADP69562.1| DNA repair protein RadC [Rhodomicrobium vannielii ATCC 17100]
          Length = 253

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 58/92 (63%), Positives = 71/92 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQSRGTIDH  VY RE+V+R LELSA+++IL HNHPSG+P PS ADI
Sbjct: 157 LFLDRRNKLIADEVQSRGTIDHTSVYTREVVKRALELSASAVILAHNHPSGDPTPSRADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT+ I    + L + VHDHII+G+D  +S K
Sbjct: 217 EMTKEIAEVGSKLGVTVHDHIILGRDGHLSLK 248


>gi|89067385|ref|ZP_01154898.1| DNA repair protein RadC [Oceanicola granulosus HTCC2516]
 gi|89046954|gb|EAR53008.1| DNA repair protein RadC [Oceanicola granulosus HTCC2516]
          Length = 255

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 75/93 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+L+ADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 159 LFLDRKNVLVADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSQADI 218

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           +MT  I    + L I++HDHI+IG+   +SF+ 
Sbjct: 219 DMTAQIARAADALGILLHDHIVIGRSRELSFRA 251


>gi|217978231|ref|YP_002362378.1| DNA repair protein RadC [Methylocella silvestris BL2]
 gi|217503607|gb|ACK51016.1| DNA repair protein RadC [Methylocella silvestris BL2]
          Length = 238

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/97 (61%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY REI++R LELSA ++ILVHNHPSG+P PS  DI
Sbjct: 142 LFLDKKNFLIADEVQGVGTVDHAPVYPREIMRRALELSACALILVHNHPSGDPEPSTEDI 201

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  II    PL I VHDH++IGK    S K +R+I
Sbjct: 202 YLTHQIIAVGKPLKITVHDHLVIGKHGHASLKEMRLI 238


>gi|260429142|ref|ZP_05783119.1| DNA repair protein RadC [Citreicella sp. SE45]
 gi|260419765|gb|EEX13018.1| DNA repair protein RadC [Citreicella sp. SE45]
          Length = 254

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 56/92 (60%), Positives = 75/92 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE+Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 158 LFLDRKNVLIADELQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSQADI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MT  I    + L I +HDH++IGK   +SF+
Sbjct: 218 DMTAQIQVAADALGITLHDHLVIGKSRELSFR 249


>gi|126734464|ref|ZP_01750211.1| DNA repair protein RadC [Roseobacter sp. CCS2]
 gi|126717330|gb|EBA14194.1| DNA repair protein RadC [Roseobacter sp. CCS2]
          Length = 255

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 73/94 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +IADE Q++GT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PSDADI
Sbjct: 155 LFLDTKNTVIADEEQAKGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSDADI 214

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            MT+ I      L IIVHDH+IIGK    SF+ L
Sbjct: 215 QMTRQIDAAAKSLGIIVHDHLIIGKSNETSFRAL 248


>gi|114762078|ref|ZP_01441546.1| DNA repair protein RadC [Pelagibaca bermudensis HTCC2601]
 gi|114545102|gb|EAU48105.1| DNA repair protein RadC [Roseovarius sp. HTCC2601]
          Length = 253

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 73/93 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 157 LFLDRKNVLIADEAQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSGADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT+ I      L I +HDH++IG+   +SF+ 
Sbjct: 217 EMTEQIRIAAEALGITLHDHLVIGRSRELSFRA 249


>gi|221640666|ref|YP_002526928.1| DNA repair protein RadC [Rhodobacter sphaeroides KD131]
 gi|221161447|gb|ACM02427.1| DNA repair protein [Rhodobacter sphaeroides KD131]
          Length = 254

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 74/93 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PSD D+
Sbjct: 158 LYLDRKNVLIADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSDQDV 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  I      L I++HDH++IG+   VSF+G
Sbjct: 218 AMTAQIQEAAATLGIVLHDHLVIGRGREVSFRG 250


>gi|319408552|emb|CBI82205.1| DNA repair protein RadC [Bartonella schoenbuchensis R1]
          Length = 264

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 59/97 (60%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N L++DEVQ  GTIDH PVY RE+V R LELSA+ +ILVHNHPSG+  PSDADI
Sbjct: 168 LFLDKKNGLLSDEVQQTGTIDHTPVYPREVVSRALELSASGLILVHNHPSGDATPSDADI 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +    N L II+HDH+II ++ + SFK L++I
Sbjct: 228 SMTYRLKDIANALGIILHDHLIIARNDYTSFKALKLI 264


>gi|86136816|ref|ZP_01055394.1| DNA repair protein RadC [Roseobacter sp. MED193]
 gi|85826140|gb|EAQ46337.1| DNA repair protein RadC [Roseobacter sp. MED193]
          Length = 258

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 56/92 (60%), Positives = 74/92 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADE Q+RGT+DHVPVY RE+ +R L+L+A+++ILVHNHPSG+P PS +DI
Sbjct: 162 LFLDRKNCLIADEEQARGTVDHVPVYPREVAKRALDLNASALILVHNHPSGDPTPSASDI 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MT  I   L PL + +HDH+IIG DA +SF+
Sbjct: 222 DMTGRINQALTPLGVTLHDHLIIGSDAELSFR 253


>gi|49474229|ref|YP_032271.1| DNA repair protein radC [Bartonella quintana str. Toulouse]
 gi|49239733|emb|CAF26115.1| DNA repair protein radC [Bartonella quintana str. Toulouse]
          Length = 264

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N L+ADEVQ  GTIDH PVY RE++ R L+LSA+ +ILVHNHPSG+ +PS+ADI
Sbjct: 168 LFLDKKNGLLADEVQQTGTIDHTPVYPREVISRALQLSASGLILVHNHPSGDSSPSEADI 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +    N L I VHDH+IIG++ + SFK L+ I
Sbjct: 228 TMTHRLKDAANALGITVHDHLIIGRNNYTSFKALKFI 264


>gi|119385035|ref|YP_916091.1| DNA repair protein RadC [Paracoccus denitrificans PD1222]
 gi|171704472|sp|A1B4F1|Y2304_PARDP RecName: Full=UPF0758 protein Pden_2304
 gi|119374802|gb|ABL70395.1| DNA repair protein RadC [Paracoccus denitrificans PD1222]
          Length = 263

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/92 (60%), Positives = 73/92 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LIADE Q+RGT+DHVPVY REI++R LELSA+++ILVHNHPSG+P PS ADI
Sbjct: 167 LYLDRKNVLIADEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQADI 226

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT  I+     + I VHDH+IIG+   +SF+
Sbjct: 227 GMTNRIVAAAEVMGIAVHDHLIIGRSRELSFR 258


>gi|85705707|ref|ZP_01036804.1| DNA repair protein RadC [Roseovarius sp. 217]
 gi|85669697|gb|EAQ24561.1| DNA repair protein RadC [Roseovarius sp. 217]
          Length = 251

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 55/92 (59%), Positives = 74/92 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            +LD+ NILIADE Q+RGT+DHVPVY RE+V+R L+L+A+++IL HNHPSG+P PS ADI
Sbjct: 155 FYLDRKNILIADEEQARGTVDHVPVYPREVVKRALQLNASALILAHNHPSGDPTPSAADI 214

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MT+ + T    L + +HDHI+IGK A VSF+
Sbjct: 215 DMTRQLQTAAEALGLALHDHIVIGKSAEVSFR 246


>gi|319404226|emb|CBI77819.1| DNA repair protein RadC [Bartonella rochalimae ATCC BAA-1498]
          Length = 264

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI+DEVQ  GTIDH PVY RE++ R LELSA+ +IL+HNHPSGN +PS ADI
Sbjct: 168 LFLDKRNGLISDEVQQTGTIDHTPVYPREVISRALELSASGLILIHNHPSGNASPSKADI 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +    N L I +HDHIII ++ + SFK L++I
Sbjct: 228 SMTYRLKDAANALEITIHDHIIIARNNYTSFKELKLI 264


>gi|295688455|ref|YP_003592148.1| DNA repair protein RadC [Caulobacter segnis ATCC 21756]
 gi|295430358|gb|ADG09530.1| DNA repair protein RadC [Caulobacter segnis ATCC 21756]
          Length = 256

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEV +RGT+DH PVY RE+++R LELS+++II+VHNHPSG+P PS  DI
Sbjct: 160 LFLDKKNQLIADEVMNRGTVDHAPVYPREVMRRALELSSSNIIIVHNHPSGDPTPSRPDI 219

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ I+     L I VHDH+++G++   SFK L ++
Sbjct: 220 DMTKQIVEAGKALKIAVHDHLVVGREGVASFKALGLM 256


>gi|319407236|emb|CBI80875.1| DNA repair protein RadC [Bartonella sp. 1-1C]
          Length = 264

 Score =  126 bits (317), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI+DEVQ  GTIDH PVY RE++ R LELSA+ +IL+HNHPSGN +PS ADI
Sbjct: 168 LFLDKRNGLISDEVQQTGTIDHTPVYPREVISRALELSASGLILIHNHPSGNASPSKADI 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +    N L I +HDHIII ++ + SFK L++I
Sbjct: 228 SMTYRLKDAANALEITIHDHIIIARNNYTSFKELKLI 264


>gi|319898913|ref|YP_004159006.1| DNA repair protein RadC [Bartonella clarridgeiae 73]
 gi|319402877|emb|CBI76428.1| DNA repair protein RadC [Bartonella clarridgeiae 73]
          Length = 261

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI+DEVQ  GTIDH PVY RE++ R LELSA+ +IL+HNHPSGN +PS ADI
Sbjct: 165 LFLDKRNGLISDEVQQTGTIDHTPVYPREVISRALELSASGLILIHNHPSGNASPSKADI 224

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +    N L I +HDHIII ++ + SFK L++I
Sbjct: 225 SMTYRLKDAANALEITIHDHIIIARNNYTSFKELKLI 261


>gi|240850644|ref|YP_002972044.1| DNA repair protein RadC [Bartonella grahamii as4aup]
 gi|240267767|gb|ACS51355.1| DNA repair protein RadC [Bartonella grahamii as4aup]
          Length = 264

 Score =  126 bits (317), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 59/97 (60%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N L+ADEVQ  GTIDH PVY RE++ R LELSA+ +ILVHNHPSG+  PSDADI
Sbjct: 168 LFLDKKNGLLADEVQQTGTIDHTPVYPREVISRALELSASGLILVHNHPSGDSTPSDADI 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +    N L II+HDH+II ++   SFK L++I
Sbjct: 228 TMTYRLKDAANALGIIIHDHLIIARNNHTSFKALKLI 264


>gi|149202958|ref|ZP_01879929.1| DNA repair protein RadC [Roseovarius sp. TM1035]
 gi|149143504|gb|EDM31540.1| DNA repair protein RadC [Roseovarius sp. TM1035]
          Length = 251

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/92 (60%), Positives = 74/92 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            +LD+ NILIADE Q+RGTIDHVPVY RE+V+R L L+A+++ILVHNHPSG+P PS ADI
Sbjct: 155 FYLDRKNILIADEEQARGTIDHVPVYPREVVKRALHLNASALILVHNHPSGDPTPSAADI 214

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MT+ + T    L + +HDHI+IGK + VSF+
Sbjct: 215 SMTRQVQTAAEALGLTLHDHIVIGKSSEVSFR 246


>gi|126732884|ref|ZP_01748675.1| DNA repair protein RadC [Sagittula stellata E-37]
 gi|126706660|gb|EBA05734.1| DNA repair protein RadC [Sagittula stellata E-37]
          Length = 252

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/92 (59%), Positives = 74/92 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 156 LYLDRKNVLIADERQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSAADI 215

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MT  I      + I+VHDH++IGK   +SF+
Sbjct: 216 DMTVQIQAAAEVMGIVVHDHLVIGKSRELSFR 247


>gi|3024521|sp|P72255|Y2304_RHOCA RecName: Full=UPF0758 protein
 gi|1658114|gb|AAB18255.1| RadC [Rhodobacter capsulatus]
          Length = 214

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 72/93 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL A+++ILVHNHPSG+P PS ADI
Sbjct: 118 LFLDRKNLLIADEEQARGTVDHVPVYPREVVKRALELDASALILVHNHPSGDPTPSQADI 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  I      L +++HDH++IGK   +SF+ 
Sbjct: 178 AMTDQIRHAAEALGLVLHDHLVIGKGRELSFRA 210


>gi|294675779|ref|YP_003576394.1| DNA repair protein RadC [Rhodobacter capsulatus SB 1003]
 gi|294474599|gb|ADE83987.1| DNA repair protein RadC [Rhodobacter capsulatus SB 1003]
          Length = 254

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 72/93 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL A+++ILVHNHPSG+P PS ADI
Sbjct: 158 LFLDRKNLLIADEEQARGTVDHVPVYPREVVKRALELDASALILVHNHPSGDPTPSQADI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  I      L +++HDH++IGK   +SF+ 
Sbjct: 218 AMTDQIRHAAEALGLVLHDHLVIGKGRELSFRA 250


>gi|144897615|emb|CAM74479.1| DNA repair protein RadC [Magnetospirillum gryphiswaldense MSR-1]
          Length = 237

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 75/93 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE+Q +GT+DH P+Y RE+V+R L+L+A++II+VHNHPSG+P PS ADI
Sbjct: 141 LFLDRKNVLIADELQGQGTVDHTPLYPREVVKRALDLNASAIIMVHNHPSGDPAPSRADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           +MT+ +   L  + I+VHDH+IIG+   VSFK 
Sbjct: 201 DMTKMVANALKGVGIVVHDHLIIGRKGHVSFKA 233


>gi|99079849|ref|YP_612003.1| DNA repair protein RadC [Ruegeria sp. TM1040]
 gi|99036129|gb|ABF62741.1| DNA repair protein RadC [Ruegeria sp. TM1040]
          Length = 258

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/92 (59%), Positives = 73/92 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ NILIADE Q+RGT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 162 LYLDRKNILIADEEQARGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQADI 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT+ +   L  L+I +HDH+IIG    +SF+
Sbjct: 222 GMTRKVGAALGALDITLHDHLIIGASDELSFR 253


>gi|254513496|ref|ZP_05125561.1| DNA repair protein RadC [Rhodobacteraceae bacterium KLH11]
 gi|221532500|gb|EEE35496.1| DNA repair protein RadC [Rhodobacteraceae bacterium KLH11]
          Length = 312

 Score =  125 bits (313), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/91 (59%), Positives = 73/91 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LI+DE Q++GT+DHVPVY REIV+R LEL+A+S+ILVHNHPSG+P PS +DI
Sbjct: 213 LYLDRKNVLISDEEQAKGTVDHVPVYPREIVKRALELNASSLILVHNHPSGDPTPSRSDI 272

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT  ++   + L I++HDH+IIGK    SF
Sbjct: 273 EMTDRVLDACDTLGILIHDHVIIGKKEEYSF 303


>gi|260576196|ref|ZP_05844189.1| DNA repair protein RadC [Rhodobacter sp. SW2]
 gi|259021676|gb|EEW24979.1| DNA repair protein RadC [Rhodobacter sp. SW2]
          Length = 256

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 75/93 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q++GT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS+ADI
Sbjct: 160 LFLDRKNVLIADEAQAKGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSEADI 219

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           ++T  I      L I ++DH+IIGKD  +SF+ 
Sbjct: 220 SVTMQIQDAAATLGITLYDHLIIGKDRELSFRA 252


>gi|163745060|ref|ZP_02152420.1| DNA repair protein RadC [Oceanibulbus indolifex HEL-45]
 gi|161381878|gb|EDQ06287.1| DNA repair protein RadC [Oceanibulbus indolifex HEL-45]
          Length = 237

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 54/92 (58%), Positives = 75/92 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ NILIADE Q++GT+DHVPVY RE+ +R LEL+A++IILVHNHPSG+P+PS +DI
Sbjct: 141 LYLDRKNILIADEEQAKGTVDHVPVYPREVAKRALELNASAIILVHNHPSGDPSPSRSDI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MT  + T  + L + +HDH+IIGK   +SF+
Sbjct: 201 DMTHQVATACDALGLTLHDHLIIGKSRELSFR 232


>gi|319405664|emb|CBI79287.1| DNA repair protein RadC [Bartonella sp. AR 15-3]
          Length = 264

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/97 (58%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI+DEVQ  GTIDH PVY RE++ R L+LSA+ +IL+HNHPSGN +PS ADI
Sbjct: 168 LFLDKRNGLISDEVQQTGTIDHTPVYPREVISRALQLSASGLILIHNHPSGNASPSKADI 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +    N L I +HDHIII ++ + SFK L++I
Sbjct: 228 SMTHRLKDAANALEITIHDHIIIARNNYTSFKELKLI 264


>gi|146278797|ref|YP_001168956.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17025]
 gi|145557038|gb|ABP71651.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17025]
          Length = 261

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 74/93 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS+ DI
Sbjct: 165 LFLDRKNVLIADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSEQDI 224

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  I      L I++HDH+I+G++  +SF+ 
Sbjct: 225 AMTGQIQDAAATLGIVLHDHLIVGRERELSFRA 257


>gi|163743881|ref|ZP_02151252.1| DNA repair protein RadC [Phaeobacter gallaeciensis 2.10]
 gi|161382822|gb|EDQ07220.1| DNA repair protein RadC [Phaeobacter gallaeciensis 2.10]
          Length = 254

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 74/93 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LIADE Q++GT+DHVPVY REI +R LE+SA+++ILVHNHPSG+P PS +DI
Sbjct: 158 LYLDRKNTLIADEEQAKGTVDHVPVYPREIAKRALEISASALILVHNHPSGDPTPSPSDI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  +   L  L+I++HDH+IIGK + +SF+ 
Sbjct: 218 EMTDRVARALAALDIVLHDHLIIGKSSELSFRS 250


>gi|163737937|ref|ZP_02145353.1| DNA repair protein RadC [Phaeobacter gallaeciensis BS107]
 gi|161388553|gb|EDQ12906.1| DNA repair protein RadC [Phaeobacter gallaeciensis BS107]
          Length = 254

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 74/93 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LIADE Q++GT+DHVPVY REI +R LE+SA+++ILVHNHPSG+P PS +DI
Sbjct: 158 LYLDRKNTLIADEEQAKGTVDHVPVYPREIAKRALEISASALILVHNHPSGDPTPSPSDI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  +   L  L+I++HDH+IIGK + +SF+ 
Sbjct: 218 EMTDRVARALAALDIVLHDHLIIGKSSELSFRS 250


>gi|296533048|ref|ZP_06895694.1| DNA repair protein RadC [Roseomonas cervicalis ATCC 49957]
 gi|296266634|gb|EFH12613.1| DNA repair protein RadC [Roseomonas cervicalis ATCC 49957]
          Length = 252

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 68/93 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIADE Q+RGT++H PVY RE+V+RCLEL AT++ILVHNHPSG+P PS ADI
Sbjct: 156 LFLDSRNRLIADEAQARGTVNHTPVYPREVVKRCLELQATALILVHNHPSGDPTPSAADI 215

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  I      L I +HDH+I+G    +SF+ 
Sbjct: 216 EMTAEIRAAAATLGIALHDHLIVGNGRHLSFRA 248


>gi|163868311|ref|YP_001609520.1| DNA repair protein RadC [Bartonella tribocorum CIP 105476]
 gi|161017967|emb|CAK01525.1| DNA repair protein RadC [Bartonella tribocorum CIP 105476]
          Length = 270

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 70/97 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N L+ADEVQ  GTIDH PVY RE++ R LELSA+ +ILVHNHPSG+  PSDADI
Sbjct: 174 LFLDKKNGLLADEVQQTGTIDHTPVYPREVISRALELSASGLILVHNHPSGDSTPSDADI 233

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +    N L I +HDH+II +    SFK L++I
Sbjct: 234 TMTYRLKDAANALGITIHDHLIIARHNHTSFKALKLI 270


>gi|254477756|ref|ZP_05091142.1| DNA repair protein RadC [Ruegeria sp. R11]
 gi|214031999|gb|EEB72834.1| DNA repair protein RadC [Ruegeria sp. R11]
          Length = 251

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 55/92 (59%), Positives = 75/92 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADE Q++GT+DHVPVY REI ++ LEL+A+++ILVHNHPSG+P+PS +DI
Sbjct: 155 LFLDRKNCLIADEEQAKGTVDHVPVYPREIAKQALELNASALILVHNHPSGDPSPSASDI 214

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT  I+  L+ L I +HDH+IIGK + +SF+
Sbjct: 215 AMTDRILQALDALGITLHDHLIIGKSSELSFR 246


>gi|254454766|ref|ZP_05068203.1| DNA repair protein RadC [Octadecabacter antarcticus 238]
 gi|198269172|gb|EDY93442.1| DNA repair protein RadC [Octadecabacter antarcticus 238]
          Length = 265

 Score =  123 bits (309), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q  GT+DHVPVY RE+V+R LEL+A+S+ILVHNHPSG+P PS+ DI
Sbjct: 169 LFLDRKNVLIADEAQGNGTVDHVPVYPREVVKRALELNASSLILVHNHPSGDPTPSNEDI 228

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      LNI +HDH+IIG+   +SFK   +I
Sbjct: 229 AMTMQIHDAAKALNISLHDHLIIGRSRELSFKSQGLI 265


>gi|163734801|ref|ZP_02142239.1| DNA repair protein RadC [Roseobacter litoralis Och 149]
 gi|161391906|gb|EDQ16237.1| DNA repair protein RadC [Roseobacter litoralis Och 149]
          Length = 314

 Score =  123 bits (309), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 52/92 (56%), Positives = 72/92 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N++IADE Q++GT+DHVPVY RE+ +R LEL+A++IILVHNHPSG+P+PS  DI
Sbjct: 217 LFLDRKNVIIADEEQAKGTVDHVPVYPREVAKRALELNASAIILVHNHPSGDPSPSSQDI 276

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT  + +    + + +HDH+IIGK+   SFK
Sbjct: 277 AMTDQVSSACLAIGVTIHDHVIIGKETEFSFK 308


>gi|89052777|ref|YP_508228.1| DNA repair protein RadC [Jannaschia sp. CCS1]
 gi|88862326|gb|ABD53203.1| DNA repair protein RadC [Jannaschia sp. CCS1]
          Length = 257

 Score =  123 bits (308), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 52/93 (55%), Positives = 73/93 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+L+ADE Q+ GT+DHVPVY RE+++R LEL+AT++ILVHNHPSG+P PS+AD+
Sbjct: 161 LYLDRKNVLVADEAQADGTVDHVPVYPREVIKRALELNATALILVHNHPSGDPTPSEADV 220

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  I    +  NI +HDH++IGK   +SF+ 
Sbjct: 221 QMTMAIRDAADVFNIAIHDHLVIGKARELSFRA 253


>gi|110680841|ref|YP_683848.1| DNA repair protein RadC [Roseobacter denitrificans OCh 114]
 gi|109456957|gb|ABG33162.1| DNA repair protein RadC [Roseobacter denitrificans OCh 114]
          Length = 301

 Score =  123 bits (308), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 52/92 (56%), Positives = 72/92 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N++IADE Q++GT+DHVPVY RE+ +R LEL+A++IILVHNHPSG+P+PS  DI
Sbjct: 204 LFLDRKNVIIADEEQAKGTVDHVPVYPREVAKRALELNASAIILVHNHPSGDPSPSTQDI 263

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT  + +    + + +HDH+IIGK+   SFK
Sbjct: 264 TMTDQVSSACLAIGVTIHDHVIIGKEREFSFK 295


>gi|254441970|ref|ZP_05055456.1| DNA repair protein RadC [Octadecabacter antarcticus 307]
 gi|198250592|gb|EDY74914.1| DNA repair protein RadC [Octadecabacter antarcticus 307]
          Length = 189

 Score =  123 bits (308), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q  GT+DHVPVY RE+V+R LEL+A+S+ILVHNHPSG+P PS+ DI
Sbjct: 93  LFLDRKNVLIADEAQGNGTVDHVPVYPREVVKRALELNASSLILVHNHPSGDPTPSNEDI 152

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      LNI +HDH+IIG+   +SFK   +I
Sbjct: 153 AMTMQIHDAAKALNISLHDHLIIGRSRELSFKSQGLI 189


>gi|254439250|ref|ZP_05052744.1| DNA repair protein RadC [Octadecabacter antarcticus 307]
 gi|198254696|gb|EDY79010.1| DNA repair protein RadC [Octadecabacter antarcticus 307]
          Length = 266

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q  GT+DHVPVY RE+V+R LEL+A+S+ILVHNHPSG+P PS+ DI
Sbjct: 170 LFLDRKNVLIADEAQGNGTVDHVPVYPREVVKRALELNASSLILVHNHPSGDPTPSNEDI 229

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      LNI +HDH+IIG+   +SFK   +I
Sbjct: 230 AMTMQIHDAAKALNISLHDHLIIGRSRELSFKSQGLI 266


>gi|182679809|ref|YP_001833955.1| DNA repair protein RadC [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182635692|gb|ACB96466.1| DNA repair protein RadC [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 241

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/97 (58%), Positives = 70/97 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ  GT+DH PVY REI++R LEL A +IILVHNHPSG+P PS  D+
Sbjct: 145 LFLDRKNGLIADEVQGIGTVDHAPVYPREIIRRALELGACAIILVHNHPSGDPTPSKEDV 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I+     + I VHDH+IIGK    S K L++I
Sbjct: 205 QITQQIVALGKAMQISVHDHLIIGKQGHASLKSLQLI 241


>gi|56694982|ref|YP_165328.1| DNA repair protein RadC [Ruegeria pomeroyi DSS-3]
 gi|73913740|sp|Q5LWK3|Y054_SILPO RecName: Full=UPF0758 protein SPO0054
 gi|56676719|gb|AAV93385.1| DNA repair protein RadC [Ruegeria pomeroyi DSS-3]
          Length = 224

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 52/93 (55%), Positives = 72/93 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            +LD+ N+LIADE Q+RGT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS +DI
Sbjct: 128 FYLDRKNVLIADEEQARGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           +MT  I +    L + +HDH+IIGK   +SF+ 
Sbjct: 188 DMTARIRSACEALGLTLHDHLIIGKSVELSFRA 220


>gi|254488973|ref|ZP_05102178.1| DNA repair protein RadC [Roseobacter sp. GAI101]
 gi|214045842|gb|EEB86480.1| DNA repair protein RadC [Roseobacter sp. GAI101]
          Length = 252

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 52/92 (56%), Positives = 72/92 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N++I DE Q +GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 156 LYLDRKNVIIGDEEQGKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQADI 215

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MTQ I+     L + +HDH+IIGK   +SF+
Sbjct: 216 DMTQQILGACTALGLTLHDHLIIGKSRELSFR 247


>gi|49475599|ref|YP_033640.1| DNA repair protein radC [Bartonella henselae str. Houston-1]
 gi|49238406|emb|CAF27633.1| DNA repair protein radC [Bartonella henselae str. Houston-1]
          Length = 264

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 56/97 (57%), Positives = 70/97 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N L+ADEVQ  GTIDH PVY RE++ R L+LSA+ +ILVHNHPSG+  PS AD+
Sbjct: 168 LFLDKKNGLLADEVQQTGTIDHTPVYPREVISRALQLSASGLILVHNHPSGDATPSKADV 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +    N L I VHDH+II ++ + SFK L+ I
Sbjct: 228 TMTYRLKDAANALGITVHDHLIIARNNYTSFKELKFI 264


>gi|254292990|ref|YP_003059013.1| DNA repair protein RadC [Hirschia baltica ATCC 49814]
 gi|254041521|gb|ACT58316.1| DNA repair protein RadC [Hirschia baltica ATCC 49814]
          Length = 272

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 56/97 (57%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIADE QS+GTI+H PVY RE+ +R LELSA+++ILVHNHPSG+P PS ADI
Sbjct: 176 LFLDHKNQLIADERQSQGTINHAPVYPRELAKRALELSASALILVHNHPSGDPTPSRADI 235

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ I+    PL I +HDH+I+GK    S K   +I
Sbjct: 236 DVTREIMDAFEPLEITIHDHLIVGKKGITSLKAKNLI 272


>gi|167621616|ref|YP_001672124.1| DNA repair protein RadC [Caulobacter sp. K31]
 gi|167351739|gb|ABZ74465.1| DNA repair protein RadC [Caulobacter sp. K31]
          Length = 253

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+ + GT+DH PVY RE+V+R LE+SA+++ILVHNHPSG+  PS ADI
Sbjct: 157 LFLDKKNQLIADEILNHGTVDHAPVYPREVVRRALEVSASAVILVHNHPSGDQTPSSADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ ++     L I VHDH+I+G+    SFK L +I
Sbjct: 217 EMTKKVVDAARTLGIAVHDHVIVGRAEVASFKALGLI 253


>gi|84514871|ref|ZP_01002234.1| DNA repair protein RadC [Loktanella vestfoldensis SKA53]
 gi|84511030|gb|EAQ07484.1| DNA repair protein RadC [Loktanella vestfoldensis SKA53]
          Length = 220

 Score =  122 bits (306), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 70/93 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N+LIADE Q++GT+DHVPVY RE+V+R LEL+A S+ILVHNHPSG+P PS ADI
Sbjct: 124 LFLDTKNVLIADEEQAKGTLDHVPVYPREVVKRALELNAASMILVHNHPSGDPTPSQADI 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT+ I      + I VHDH+IIGK   +S + 
Sbjct: 184 TMTRQISDAAGTMGITVHDHLIIGKSCEISLRA 216


>gi|259417142|ref|ZP_05741061.1| DNA repair protein RadC [Silicibacter sp. TrichCH4B]
 gi|259346048|gb|EEW57862.1| DNA repair protein RadC [Silicibacter sp. TrichCH4B]
          Length = 271

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 53/92 (57%), Positives = 72/92 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LIADE Q RGT+DHVPVY RE+ +R LEL+++++ILVHNHPSG+P PS ADI
Sbjct: 175 LYLDRKNVLIADEEQGRGTVDHVPVYPREVAKRALELNSSALILVHNHPSGDPTPSQADI 234

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT+ +   L+ L I +HDH+IIG    +SF+
Sbjct: 235 AMTRKVEAALDALGITLHDHLIIGASDELSFR 266


>gi|84500637|ref|ZP_00998886.1| DNA repair protein [Oceanicola batsensis HTCC2597]
 gi|84391590|gb|EAQ03922.1| DNA repair protein [Oceanicola batsensis HTCC2597]
          Length = 251

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 73/93 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+L+ADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 155 LFLDRKNVLVADEPQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSPADI 214

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           +MT  +    + L I VHDH++IG+    SF+ 
Sbjct: 215 DMTAQVAAAADALGITVHDHLVIGRATEFSFRA 247


>gi|329889720|ref|ZP_08268063.1| hypothetical protein BDIM_14090 [Brevundimonas diminuta ATCC
          11568]
 gi|328845021|gb|EGF94585.1| hypothetical protein BDIM_14090 [Brevundimonas diminuta ATCC
          11568]
          Length = 98

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 52/97 (53%), Positives = 75/97 (77%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          L+LDK NIL+ +E ++ GT+DH PVY+RE+V+R LELSA+++ILVHNHPSG+P PS ADI
Sbjct: 2  LYLDKRNILMREEHRADGTVDHAPVYVREVVRRALELSASAMILVHNHPSGDPTPSRADI 61

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           MT+ +I      +I VHDH+++G++   SF+ L +I
Sbjct: 62 EMTRRVIEAARVFDIQVHDHVVVGREGEQSFRALGLI 98


>gi|315500042|ref|YP_004088845.1| DNA repair protein radc [Asticcacaulis excentricus CB 48]
 gi|315418054|gb|ADU14694.1| DNA repair protein RadC [Asticcacaulis excentricus CB 48]
          Length = 244

 Score =  121 bits (304), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/92 (58%), Positives = 70/92 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+ + GT+DH P Y REI++R LELSA+S+ILVHNHPSG+P PS  DI
Sbjct: 148 LFLDKKNQLIADEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDI 207

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MT+  I    PL I +HDH+I+G++  +S K
Sbjct: 208 DMTKANIAAGKPLKIAIHDHLIVGREGVLSMK 239


>gi|126738441|ref|ZP_01754146.1| DNA repair protein RadC [Roseobacter sp. SK209-2-6]
 gi|126720240|gb|EBA16946.1| DNA repair protein RadC [Roseobacter sp. SK209-2-6]
          Length = 258

 Score =  121 bits (304), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 72/93 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADE Q+ GT+DHVPVY RE+V+R LE +A ++ILVHNHPSG+P+PS +DI
Sbjct: 162 LFLDRKNRLIADEEQAEGTVDHVPVYPREVVKRALEHNACALILVHNHPSGDPSPSQSDI 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  I   L+PL I +HDH+IIG  A +SF+ 
Sbjct: 222 EMTDRIHRALHPLGIALHDHLIIGSSAELSFRS 254


>gi|254511714|ref|ZP_05123781.1| DNA repair protein RadC [Rhodobacteraceae bacterium KLH11]
 gi|221535425|gb|EEE38413.1| DNA repair protein RadC [Rhodobacteraceae bacterium KLH11]
          Length = 251

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 52/92 (56%), Positives = 73/92 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            +LD+ N+LIADE Q++GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS +DI
Sbjct: 155 FYLDRKNVLIADEEQAKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQSDI 214

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MT  I    + L + +HDH+IIGK A +SF+
Sbjct: 215 DMTNRIQDACSALGLTLHDHLIIGKSAELSFR 246


>gi|126724639|ref|ZP_01740482.1| DNA repair protein RadC [Rhodobacterales bacterium HTCC2150]
 gi|126705803|gb|EBA04893.1| DNA repair protein RadC [Rhodobacterales bacterium HTCC2150]
          Length = 253

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 56/97 (57%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LI DE   RGT+DHVPVY RE+ +R LE+SA+++ILVHNHPSG+P PS  DI
Sbjct: 157 LFLDRKNVLITDEALGRGTVDHVPVYPREVAKRGLEVSASAVILVHNHPSGDPTPSGPDI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MTQ I   L  L I +HDH+IIGK   +SF+   +I
Sbjct: 217 QMTQEIDNALTTLGIKLHDHLIIGKFGEISFRAEGLI 253


>gi|83941929|ref|ZP_00954391.1| DNA repair protein RadC [Sulfitobacter sp. EE-36]
 gi|83847749|gb|EAP85624.1| DNA repair protein RadC [Sulfitobacter sp. EE-36]
          Length = 253

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 51/92 (55%), Positives = 72/92 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD+ N++I DE Q +GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 157 IYLDRKNVVIGDEEQGKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MTQ I    + L + +HDH+IIGK   +SF+
Sbjct: 217 DMTQQIFAACSALGLTLHDHLIIGKSRELSFR 248


>gi|83855405|ref|ZP_00948935.1| DNA repair protein RadC [Sulfitobacter sp. NAS-14.1]
 gi|83843248|gb|EAP82415.1| DNA repair protein RadC [Sulfitobacter sp. NAS-14.1]
          Length = 253

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 51/92 (55%), Positives = 71/92 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD+ N++I DE Q +GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 157 IYLDRKNVVIGDEEQGKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MTQ I    + L + +HDH+IIGK   +SF+
Sbjct: 217 GMTQQIFAACSALGLTLHDHLIIGKSRELSFR 248


>gi|310817115|ref|YP_003965079.1| DNA repair protein RadC [Ketogulonicigenium vulgare Y25]
 gi|308755850|gb|ADO43779.1| DNA repair protein RadC [Ketogulonicigenium vulgare Y25]
          Length = 252

 Score =  121 bits (303), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 73/93 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ NILIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS  DI
Sbjct: 156 LFLDRKNILIADEAQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSPQDI 215

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T+ I   L  L + +HDH++IG+   +SF+ 
Sbjct: 216 AITKQIDEGLRVLGLTLHDHLVIGRAREISFRA 248


>gi|149912934|ref|ZP_01901468.1| DNA repair protein RadC [Roseobacter sp. AzwK-3b]
 gi|149813340|gb|EDM73166.1| DNA repair protein RadC [Roseobacter sp. AzwK-3b]
          Length = 254

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 53/93 (56%), Positives = 72/93 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            +LD+ NILIADE Q+ GT+DHVPVY RE+V+R L L+A+++ILVHNHPSG+P PS++DI
Sbjct: 158 FYLDRKNILIADEAQANGTVDHVPVYPREVVKRALHLNASALILVHNHPSGDPTPSESDI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           +MT  I T    L + +HDH+IIGK   +SF+ 
Sbjct: 218 HMTHQIQTAAQALGLTLHDHLIIGKSCEISFRA 250


>gi|159046109|ref|YP_001534903.1| DNA repair protein RadC [Dinoroseobacter shibae DFL 12]
 gi|157913869|gb|ABV95302.1| DNA repair protein RadC [Dinoroseobacter shibae DFL 12]
          Length = 254

 Score =  120 bits (301), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 70/93 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N+LIADE Q+RGT+DHVPVY REI +R LEL+A+++ILVHNHPSG+P PS+ DI
Sbjct: 158 LYLDNKNVLIADEAQARGTVDHVPVYPREIAKRALELNASALILVHNHPSGDPTPSEQDI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  I      L + +HDH++IGK   VSF+ 
Sbjct: 218 TMTYAIRDAAEVLGLRLHDHLVIGKSREVSFRA 250


>gi|84684609|ref|ZP_01012510.1| DNA repair protein RadC [Maritimibacter alkaliphilus HTCC2654]
 gi|84667588|gb|EAQ14057.1| DNA repair protein RadC [Rhodobacterales bacterium HTCC2654]
          Length = 257

 Score =  120 bits (300), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 54/92 (58%), Positives = 71/92 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LIADE  + GT+ HVPVY REIV+R LELSA+++ILVHNHPSG+P+PS  DI
Sbjct: 160 LYLDRKNTLIADEAAAEGTVGHVPVYPREIVKRALELSASALILVHNHPSGDPSPSRDDI 219

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MT+ + +    L I +HDHIIIGK   VS++
Sbjct: 220 DMTERVRSAAAALEITLHDHIIIGKSREVSYR 251


>gi|83950724|ref|ZP_00959457.1| DNA repair protein RadC [Roseovarius nubinhibens ISM]
 gi|83838623|gb|EAP77919.1| DNA repair protein RadC [Roseovarius nubinhibens ISM]
          Length = 250

 Score =  120 bits (300), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 68/93 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            FLD  N LIADE Q+RGT+DHVPVY RE+V+R L L+AT++ILVHNHPSG+P PS +DI
Sbjct: 154 FFLDTKNTLIADEDQARGTVDHVPVYPREVVKRALALNATALILVHNHPSGDPTPSQSDI 213

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  I      L I +HDHIIIGK   +SF+ 
Sbjct: 214 AMTAQIAQAAGSLGITLHDHIIIGKSRELSFRA 246


>gi|254419921|ref|ZP_05033645.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
 gi|196186098|gb|EDX81074.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
          Length = 228

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 50/97 (51%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+L+ DE  + GT+DH PVY RE+V+R LELSA+++ILVHNHPSG+P PS ADI
Sbjct: 132 LYLDRRNLLLKDEWVADGTVDHAPVYPREVVRRALELSASAMILVHNHPSGDPAPSRADI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ ++       + VHDH+++G++   SFK L +I
Sbjct: 192 EMTRRVVDAARVFGLDVHDHLVVGREGTASFKSLGLI 228


>gi|329851338|ref|ZP_08266095.1| DNA repair protein RadC family protein [Asticcacaulis biprosthecum
           C19]
 gi|328840184|gb|EGF89756.1| DNA repair protein RadC family protein [Asticcacaulis biprosthecum
           C19]
          Length = 243

 Score =  120 bits (300), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 53/97 (54%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK   LIADE+   GT+DH P Y REI++R LELSA+S+ILVHNHPSG+P+ S  DI
Sbjct: 147 LFLDKKYQLIADEIMGYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPSASPGDI 206

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ I+    PL I VHDH+I+G++  +S    R++
Sbjct: 207 DMTRQIVKAGEPLRIKVHDHLIVGREGVLSMSQQRLM 243


>gi|304391571|ref|ZP_07373513.1| putative DNA repair protein RadC-like protein [Ahrensia sp. R2A130]
 gi|303295800|gb|EFL90158.1| putative DNA repair protein RadC-like protein [Ahrensia sp. R2A130]
          Length = 259

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/97 (55%), Positives = 70/97 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K N L+ DE    GT+DH P Y REIV+R LE+ AT++ILVHNHPSG+P PS ADI
Sbjct: 163 LYLNKQNGLMDDEEMQEGTVDHTPAYPREIVRRALEVGATAVILVHNHPSGDPTPSRADI 222

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I T+   +NI VHDHIIIG+D   S K L++ 
Sbjct: 223 ELTRQINTSCQTMNIAVHDHIIIGRDTHTSMKALQLF 259


>gi|254418550|ref|ZP_05032274.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
 gi|196184727|gb|EDX79703.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
          Length = 205

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/97 (53%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+ DE  + GT+DH PVY RE+V+R LELSA+++ILVHNHPSG+P PS ADI
Sbjct: 109 LYLDHRNTLLRDEWVAEGTVDHAPVYPREVVRRALELSASAMILVHNHPSGDPTPSHADI 168

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ ++     L++ VHDH++IG+    SFK L +I
Sbjct: 169 EMTRKVVNAAEALSLKVHDHLVIGRAGTASFKALGLI 205


>gi|163733013|ref|ZP_02140457.1| DNA repair protein RadC [Roseobacter litoralis Och 149]
 gi|161393548|gb|EDQ17873.1| DNA repair protein RadC [Roseobacter litoralis Och 149]
          Length = 253

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/93 (55%), Positives = 71/93 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N +IADE Q++GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS +DI
Sbjct: 157 LFLDRKNTVIADEEQAKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQSDI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           +MT  I      L + +HDH+IIGK   +SF+ 
Sbjct: 217 SMTDQINAACQTLGLTLHDHLIIGKSTELSFRA 249


>gi|89053211|ref|YP_508662.1| DNA repair protein RadC [Jannaschia sp. CCS1]
 gi|88862760|gb|ABD53637.1| DNA repair protein RadC [Jannaschia sp. CCS1]
          Length = 273

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/93 (55%), Positives = 72/93 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N+LIADE    GT+DHVPVY RE+ +R LEL+AT+IILVHNHPSG+P PS ADI
Sbjct: 177 LYLNRRNVLIADEAVGTGTVDHVPVYPREVAKRSLELNATAIILVHNHPSGDPTPSQADI 236

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           ++TQ +    + + ++VHDH+IIGK +  SF+ 
Sbjct: 237 DVTQAVQLACDAIGVVVHDHVIIGKQSETSFRA 269


>gi|121602861|ref|YP_989118.1| RadC family DNA repair protein [Bartonella bacilliformis KC583]
 gi|120615038|gb|ABM45639.1| DNA repair protein, RadC family [Bartonella bacilliformis KC583]
          Length = 265

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK + L++DEVQ  GTID  PVY RE+V R LELSA+ IILVHNHPSG+ +PS  DI
Sbjct: 169 LFLDKKHGLLSDEVQQTGTIDRTPVYPREVVSRALELSASGIILVHNHPSGDASPSQEDI 228

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +    N L+I +HDH+II ++ ++SFK L++I
Sbjct: 229 SMTYRLKDVANALDITLHDHLIIARNDYISFKALKLI 265


>gi|260432018|ref|ZP_05785989.1| DNA repair protein RadC [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415846|gb|EEX09105.1| DNA repair protein RadC [Silicibacter lacuscaerulensis ITI-1157]
          Length = 251

 Score =  118 bits (296), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 51/92 (55%), Positives = 71/92 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            +LD+ N+LIADE Q++GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS +DI
Sbjct: 155 FYLDRKNVLIADEEQAKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQSDI 214

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MT  I      L + +HDH+IIGK   +SF+
Sbjct: 215 DMTNRINDACAALGLTLHDHLIIGKSTELSFR 246


>gi|296535628|ref|ZP_06897807.1| DNA repair protein RadC [Roseomonas cervicalis ATCC 49957]
 gi|296264052|gb|EFH10498.1| DNA repair protein RadC [Roseomonas cervicalis ATCC 49957]
          Length = 297

 Score =  118 bits (295), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/92 (56%), Positives = 67/92 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIADE Q+RGT++H PVY RE+++R LEL AT++ILVHNHPSG+P PS ADI
Sbjct: 201 LFLDSKNRLIADEAQARGTVNHTPVYPREVLRRALELHATALILVHNHPSGDPTPSSADI 260

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT  I       ++++HDH+IIG     SF+
Sbjct: 261 EMTGEIRRAAQVFSVVLHDHLIIGNGRHFSFR 292


>gi|46202447|ref|ZP_00053202.2| COG2003: DNA repair proteins [Magnetospirillum magnetotacticum
           MS-1]
          Length = 128

 Score =  117 bits (292), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 49/97 (50%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ  GT+DH P+Y RE+V+R L L A++I++VHNHPSG+P PS AD+
Sbjct: 32  LFLDRKNTLIADEVQQTGTVDHTPLYPREVVKRALALHASAIVMVHNHPSGDPKPSRADM 91

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +   L  + I +HDH+++G+    SFK + ++
Sbjct: 92  EMTRAVKDALAAVGIALHDHVVVGRKGHSSFKAMGLL 128


>gi|326403686|ref|YP_004283768.1| DNA repair protein RadC [Acidiphilium multivorum AIU301]
 gi|325050548|dbj|BAJ80886.1| DNA repair protein RadC [Acidiphilium multivorum AIU301]
          Length = 255

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 53/97 (54%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQS GT++H P+Y RE+++R LE  AT+IILVHNHPSG+P PS  D+
Sbjct: 159 LFLDQRNRLIADEVQSVGTVNHTPLYPRELIRRALEHHATAIILVHNHPSGDPTPSPEDV 218

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I    + L+I++HDH+I+G   +VS K L ++
Sbjct: 219 AMTREIKQAASTLSIVLHDHVIVGNGKWVSLKRLGLL 255


>gi|148260493|ref|YP_001234620.1| DNA repair protein RadC [Acidiphilium cryptum JF-5]
 gi|146402174|gb|ABQ30701.1| DNA repair protein RadC [Acidiphilium cryptum JF-5]
          Length = 255

 Score =  117 bits (292), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 53/97 (54%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQS GT++H P+Y RE+++R LE  AT+IILVHNHPSG+P PS  D+
Sbjct: 159 LFLDQRNRLIADEVQSVGTVNHTPLYPRELIRRALEHHATAIILVHNHPSGDPTPSPEDV 218

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I    + L+I++HDH+I+G   +VS K L ++
Sbjct: 219 AMTREIKQAASTLSIVLHDHVIVGNGKWVSLKRLGLL 255


>gi|126464466|ref|YP_001045579.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17029]
 gi|126106277|gb|ABN78807.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17029]
          Length = 138

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 51/93 (54%), Positives = 69/93 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N++IADE  S GT+ HVPVY RE+ +R LEL+A+++IL+HNHPSG+P PS  DI
Sbjct: 42  LFLDSKNVVIADEALSSGTVAHVPVYPREVAKRALELNASAVILIHNHPSGDPTPSTEDI 101

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT  I +    + + VHDHI+IG++A VSF+ 
Sbjct: 102 EMTFQIASACEAIEVRVHDHIVIGREAEVSFRA 134


>gi|114569594|ref|YP_756274.1| DNA repair protein RadC [Maricaulis maris MCS10]
 gi|114340056|gb|ABI65336.1| DNA repair protein RadC [Maricaulis maris MCS10]
          Length = 226

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/97 (54%), Positives = 68/97 (70%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEV   GTIDH PVY RE+V+  L   A++IILVHNHPSG+  PS ADI
Sbjct: 130 LFLDRKNKLIADEVLGEGTIDHAPVYPREVVKSALAHEASAIILVHNHPSGDATPSQADI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ ++    P  I VHDH++IG++   SFK L ++
Sbjct: 190 EMTRTLMEICKPFEIAVHDHLVIGRENTASFKTLGLM 226


>gi|148261604|ref|YP_001235731.1| DNA repair protein RadC [Acidiphilium cryptum JF-5]
 gi|146403285|gb|ABQ31812.1| DNA repair protein RadC [Acidiphilium cryptum JF-5]
          Length = 246

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 71/92 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N L+ADEV SRGT++H  VY+RE+V+R +E  AT++ILVHNHPSG+P+PS  D+
Sbjct: 145 IYLDNRNRLLADEVASRGTVNHTQVYVREVVRRAIETRATALILVHNHPSGDPSPSRDDV 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT+ +   +  L+I +HDH+IIGK  ++SF+
Sbjct: 205 EMTREVQRAVALLDITLHDHVIIGKAGWLSFR 236


>gi|163793591|ref|ZP_02187566.1| DNA repair protein RadC [alpha proteobacterium BAL199]
 gi|159181393|gb|EDP65908.1| DNA repair protein RadC [alpha proteobacterium BAL199]
          Length = 229

 Score =  114 bits (286), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 69/92 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LI DE Q RGT+DH P+Y RE+V+R LEL A+++I+VHNHPSG+P PS ADI
Sbjct: 133 LYLDRKNRLIRDERQGRGTVDHTPLYPREVVKRALELGASAVIVVHNHPSGDPTPSQADI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +   L+ L +I+HDH+I+ +    SF+
Sbjct: 193 VVTRQLGEALSTLGLILHDHLIVARGGHTSFR 224


>gi|326405093|ref|YP_004285175.1| hypothetical protein ACMV_29460 [Acidiphilium multivorum AIU301]
 gi|325051955|dbj|BAJ82293.1| hypothetical protein ACMV_29460 [Acidiphilium multivorum AIU301]
          Length = 266

 Score =  114 bits (285), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 48/92 (52%), Positives = 71/92 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N L+ADEV SRGT++H  VY+RE+V+R +E  AT++ILVHNHPSG+P+PS  D+
Sbjct: 165 IYLDNRNRLLADEVASRGTVNHTQVYVREVVRRAIETRATALILVHNHPSGDPSPSRDDV 224

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT+ +   +  L+I +HDH+IIGK  ++SF+
Sbjct: 225 EMTREVQRAVALLDITLHDHVIIGKAGWLSFR 256


>gi|157827698|ref|YP_001496762.1| DNA repair protein RadC [Rickettsia bellii OSU 85-389]
 gi|157803002|gb|ABV79725.1| DNA repair protein RadC [Rickettsia bellii OSU 85-389]
          Length = 249

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 70/93 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NILIADEV S+GTID   VY REI++R L   A++IILVHNHPSG+P+PS ADI
Sbjct: 153 LFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           +MT  I+     +NIIVHDH+II  + + SFK 
Sbjct: 213 DMTNIIVDMCKTINIIVHDHVIISNNKYFSFKS 245


>gi|255262247|ref|ZP_05341589.1| DNA repair protein RadC [Thalassiobium sp. R2A62]
 gi|255104582|gb|EET47256.1| DNA repair protein RadC [Thalassiobium sp. R2A62]
          Length = 190

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/93 (54%), Positives = 71/93 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LIADE  ++GT+ HVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS++DI
Sbjct: 94  LYLDRKNTLIADEQLAKGTVVHVPVYPREVVKRALELNASALILVHNHPSGDPTPSESDI 153

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           +MT  I      L++ +HDH+II K   +SFK 
Sbjct: 154 SMTVQIDQAARALDVTLHDHLIISKSRELSFKS 186


>gi|83956247|ref|ZP_00964688.1| DNA repair protein [Sulfitobacter sp. NAS-14.1]
 gi|83839468|gb|EAP78649.1| DNA repair protein [Sulfitobacter sp. NAS-14.1]
          Length = 146

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 49/94 (52%), Positives = 72/94 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N +IADE+ S GT+DHVPVY RE+++R L L+A+++IL+HNHPSG+P PS+AD+
Sbjct: 50  LYLDRKNRIIADELLSTGTVDHVPVYPREVIKRALMLNASALILIHNHPSGDPTPSEADL 109

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           +MT+ I      L + +HDHII+G    +S +GL
Sbjct: 110 SMTKEIQKGCKYLGLTLHDHIIVGAGTELSLRGL 143


>gi|56551559|ref|YP_162398.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761310|ref|ZP_04759398.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|56543133|gb|AAV89287.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241374217|gb|EER63714.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 227

 Score =  111 bits (277), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 47/97 (48%), Positives = 69/97 (71%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD HN LI DE+ S G++D  PVY+RE+++R +EL +  +ILVHNHPSG+ +PS+ADI
Sbjct: 131 LHLDNHNRLIRDEILSEGSVDQAPVYVREVIRRAIELCSVGLILVHNHPSGDASPSEADI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++I+    PL I +HDH+II      S +GL ++
Sbjct: 191 QLTRSIVAAARPLKIYLHDHVIISSSGACSLRGLGLL 227


>gi|260752842|ref|YP_003225735.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552205|gb|ACV75151.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 227

 Score =  111 bits (277), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 47/97 (48%), Positives = 69/97 (71%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD HN LI DE+ S G++D  PVY+RE+++R +EL +  +ILVHNHPSG+ +PS+ADI
Sbjct: 131 LHLDNHNRLIRDEILSEGSVDQAPVYVREVIRRAIELCSVGLILVHNHPSGDASPSEADI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++I+    PL I +HDH+II      S +GL ++
Sbjct: 191 QLTRSIVAAARPLKIYLHDHVIISSSGACSLRGLGLL 227


>gi|254420570|ref|ZP_05034294.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
 gi|196186747|gb|EDX81723.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
          Length = 192

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ NIL+ DE+ + G++DH PVY RE+++R LELSA+++IL+HNHPSG+P PS ADI
Sbjct: 96  LYLDRRNILMRDELVADGSVDHAPVYPREVIRRALELSASALILLHNHPSGDPAPSQADI 155

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++       + VHDH+I+G++   S + L ++
Sbjct: 156 VVTKQVVDAAKLFGLQVHDHLIVGREGTASLRALGLV 192


>gi|304320238|ref|YP_003853881.1| DNA repair protein RadC [Parvularcula bermudensis HTCC2503]
 gi|303299140|gb|ADM08739.1| DNA repair protein RadC [Parvularcula bermudensis HTCC2503]
          Length = 245

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 46/97 (47%), Positives = 69/97 (71%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N+LIADEV   GT++  PVY RE+V+R L L A+++IL+HNHPSG+P PS ADI
Sbjct: 149 LYLNAKNVLIADEVHGSGTVNQTPVYPREVVKRALHLDASALILIHNHPSGDPTPSTADI 208

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++     + + VHDH++IG++   SFK L ++
Sbjct: 209 KVTAQLVAAAATVGVTVHDHLVIGREGHASFKSLGLL 245


>gi|91204972|ref|YP_537327.1| DNA repair protein RadC [Rickettsia bellii RML369-C]
 gi|91068516|gb|ABE04238.1| DNA repair protein RadC [Rickettsia bellii RML369-C]
          Length = 249

 Score =  110 bits (276), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 69/93 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NILIADEV S+GTID   VY REI++R L   A++IILVHNHPSG+P+PS A I
Sbjct: 153 LFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKAGI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           +MT  I+     +NIIVHDH+II  + + SFK 
Sbjct: 213 DMTNIIVDMCKTINIIVHDHVIISNNKYFSFKS 245


>gi|255292379|dbj|BAH89498.1| DNA repair protein RadC [uncultured bacterium]
          Length = 146

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 71/94 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N +IADE+ S GT+DHVPVY RE+++R L L+A+++IL+HNHPSG+P PS+AD+
Sbjct: 50  LYLDRKNRIIADELLSTGTVDHVPVYPREVIKRALMLNASALILIHNHPSGDPTPSEADL 109

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           +MT+ I      L + +HDHII+G    +S + L
Sbjct: 110 SMTKEIQKGCKYLGLTMHDHIIVGAGTELSLRAL 143


>gi|114328318|ref|YP_745475.1| DNA repair protein radC [Granulibacter bethesdensis CGDNIH1]
 gi|114316492|gb|ABI62552.1| DNA repair protein radC [Granulibacter bethesdensis CGDNIH1]
          Length = 271

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 49/92 (53%), Positives = 68/92 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIADE+ + GT++H PVY RE+V+R LEL AT++I+VHNHPSG+P PS  DI
Sbjct: 175 LFLDNRNQLIADEILAHGTVNHAPVYPREVVKRALELHATALIVVHNHPSGDPTPSAEDI 234

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT+ +      L++ +HDH+IIG+  + SF+
Sbjct: 235 RMTRELREAGRLLSLDLHDHVIIGRHGWSSFR 266


>gi|58040815|ref|YP_192779.1| DNA repair protein RadC [Gluconobacter oxydans 621H]
 gi|58003229|gb|AAW62123.1| DNA repair protein RadC [Gluconobacter oxydans 621H]
          Length = 216

 Score =  110 bits (274), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 46/92 (50%), Positives = 66/92 (71%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N LIADE Q+RGT++H PVY RE+ +R +E+ AT+++LVHNHPSG+P PS+AD+
Sbjct: 120 LFLNEKNSLIADEAQARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEADL 179

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT  +   L  + + + DH IIG     SF+
Sbjct: 180 QMTMQVQAALEVVGVTIADHFIIGNGRHTSFR 211


>gi|85707304|ref|ZP_01038388.1| DNA repair protein RadC [Roseovarius sp. 217]
 gi|85668185|gb|EAQ23062.1| DNA repair protein RadC [Roseovarius sp. 217]
          Length = 146

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 71/94 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N +IADE+ S GT+DHVPVY RE+++R L L+A+++IL+HNHPSG+P PS+AD+
Sbjct: 50  LYLDRKNRIIADELLSTGTVDHVPVYPREVIKRALMLNASALILIHNHPSGDPTPSEADL 109

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           +MT+ I      L + +HDHII+G    +S + L
Sbjct: 110 SMTKEIQKGCKYLGLTLHDHIIVGAGTELSLRAL 143


>gi|254501417|ref|ZP_05113568.1| DNA repair protein RadC [Labrenzia alexandrii DFL-11]
 gi|222437488|gb|EEE44167.1| DNA repair protein RadC [Labrenzia alexandrii DFL-11]
          Length = 228

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/97 (51%), Positives = 70/97 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K + +IADEV   GT+DH PVY RE+++R L L A+++ILVHNHPSG+P PS  DI
Sbjct: 132 LFLNKKHGVIADEVMQEGTVDHTPVYPRELMRRALILQASALILVHNHPSGDPTPSRPDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  ++    PL I ++DHII+ +   VSFKG+ ++
Sbjct: 192 EMTAQLVDIAKPLGIEINDHIIVARGLAVSFKGMNLL 228


>gi|218458578|ref|ZP_03498669.1| DNA repair protein RadC [Rhizobium etli Kim 5]
          Length = 261

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/63 (77%), Positives = 56/63 (88%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 199 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 258

Query: 61  NMT 63
           +MT
Sbjct: 259 DMT 261


>gi|83592071|ref|YP_425823.1| DNA repair protein RadC [Rhodospirillum rubrum ATCC 11170]
 gi|83574985|gb|ABC21536.1| DNA repair protein RadC [Rhodospirillum rubrum ATCC 11170]
          Length = 243

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/92 (53%), Positives = 65/92 (70%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIADE+Q  GTI+H PVY RE+ +R LEL A +II+VHNHPSG+P PS AD 
Sbjct: 147 LFLDNRNRLIADELQQTGTINHTPVYPREVARRALELHAAAIIMVHNHPSGDPAPSAADQ 206

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MT  +   L  + + +HDHI++ +   VSF+
Sbjct: 207 DMTLQVRDALRAVGVGLHDHIVVARGGHVSFR 238


>gi|148284968|ref|YP_001249058.1| DNA repair protein [Orientia tsutsugamushi str. Boryong]
 gi|146740407|emb|CAM80876.1| DNA repair protein [Orientia tsutsugamushi str. Boryong]
          Length = 226

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 52/93 (55%), Positives = 64/93 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NI+IADE+   GT+D  PVY REIV+R L   A++IILVHNHPSG P PS  DI
Sbjct: 130 LFLNKKNIIIADELHGIGTVDQTPVYPREIVKRALFHEASAIILVHNHPSGTPKPSAIDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T  I+      +IIVHDH+II  + F SFK 
Sbjct: 190 EITTKIVEACKTFSIIVHDHVIICSNNFFSFKS 222


>gi|189184090|ref|YP_001937875.1| DNA repair protein RadC [Orientia tsutsugamushi str. Ikeda]
 gi|189180861|dbj|BAG40641.1| DNA repair protein RadC [Orientia tsutsugamushi str. Ikeda]
          Length = 226

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 52/93 (55%), Positives = 64/93 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NI+IADE+   GT+D  PVY REIV+R L   A++IILVHNHPSG P PS  DI
Sbjct: 130 LFLNKKNIIIADELHGIGTVDQTPVYPREIVKRALFHEASAIILVHNHPSGTPKPSAIDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T  I+      +IIVHDH+II  + F SFK 
Sbjct: 190 EITTKIVEACKTFSIIVHDHVIICSNNFFSFKS 222


>gi|119384282|ref|YP_915338.1| DNA repair protein RadC [Paracoccus denitrificans PD1222]
 gi|119374049|gb|ABL69642.1| DNA repair protein RadC [Paracoccus denitrificans PD1222]
          Length = 162

 Score =  105 bits (263), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 66/93 (70%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LI+DE  + GT+DHVPVY RE+++RCL L+A+++I+VHNHP+G+P PS AD 
Sbjct: 66  LYLDRRNRLISDECLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHPAGDPEPSAADF 125

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT+ I      L +I+HDHII G     S + 
Sbjct: 126 AMTKEIRNASASLGVILHDHIITGAGRETSLRA 158


>gi|148557370|ref|YP_001264952.1| DNA repair protein RadC [Sphingomonas wittichii RW1]
 gi|148502560|gb|ABQ70814.1| DNA repair protein RadC [Sphingomonas wittichii RW1]
          Length = 230

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 66/97 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N+L+ DE+ S G++D   VY+REI++R LEL + ++I+VHNHPSG+P PS  D+
Sbjct: 134 LHLNSKNVLVRDELVSEGSVDQAAVYVREIIRRALELGSAALIIVHNHPSGDPQPSRQDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I    PL I +HDH+++G     S + L +I
Sbjct: 194 ELTRELIAAAKPLGIAIHDHVVVGTRGQASLRALGLI 230


>gi|126730724|ref|ZP_01746534.1| DNA repair protein RadC [Sagittula stellata E-37]
 gi|126708890|gb|EBA07946.1| DNA repair protein RadC [Sagittula stellata E-37]
          Length = 146

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 46/94 (48%), Positives = 68/94 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            +LD+ N +I+DE+ S GT+DHVPVY RE+++R L L+A +++L+HNHPSG+P PSDADI
Sbjct: 50  FYLDRKNRIISDELLSIGTVDHVPVYPREVIKRALMLNACALVLIHNHPSGDPTPSDADI 109

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           +M + I      L + +HDHII+G    +S + L
Sbjct: 110 SMIKEIQKGCRYLGLTLHDHIIVGAGTELSLRAL 143


>gi|167621854|ref|YP_001676639.1| DNA repair protein RadC [Caulobacter sp. K31]
 gi|167351595|gb|ABZ74325.1| DNA repair protein RadC [Caulobacter sp. K31]
          Length = 223

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 45/93 (48%), Positives = 64/93 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N L++ E    G++DH PVY RE+++R LEL+ +++IL HNHPSG+P PS  DI
Sbjct: 127 LFLDRRNQLLSAERLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT+ +I     L I +HDH+I+   A VSF+ 
Sbjct: 187 EMTKTLIEAGKALQIQIHDHMIVAGGAVVSFRA 219


>gi|260427275|ref|ZP_05781254.1| DNA repair protein RadC [Citreicella sp. SE45]
 gi|260421767|gb|EEX15018.1| DNA repair protein RadC [Citreicella sp. SE45]
          Length = 139

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 45/93 (48%), Positives = 66/93 (70%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LI+DE  + GT+DHVPVY RE+++RCL L+A+++I+VHNH +G+P PS AD+
Sbjct: 43  LYLDRRNRLISDECLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHSAGDPEPSAADL 102

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            MT+ +      L +I+HDHII G     S + 
Sbjct: 103 EMTKEVQIACASLGVILHDHIITGAGRETSLRA 135


>gi|126463593|ref|YP_001044707.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17029]
 gi|126105257|gb|ABN77935.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17029]
          Length = 223

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 57/66 (86%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PSD D+
Sbjct: 158 LYLDRKNVLIADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSDQDV 217

Query: 61  NMTQNI 66
            MT  I
Sbjct: 218 AMTAQI 223


>gi|103486559|ref|YP_616120.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256]
 gi|98976636|gb|ABF52787.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256]
          Length = 272

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 68/97 (70%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N+LI DE+ S G+ID   +Y+RE+++R LEL A++II+VHNHPSG+P PS  DI
Sbjct: 176 LYLNSRNMLIRDELASEGSIDQSAIYVREVIRRALELGASAIIIVHNHPSGSPEPSRQDI 235

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      L I++HDHII+    + SF+ L ++
Sbjct: 236 AVTREIAEAGTRLGIVLHDHIIVAGSDYRSFRALGLL 272


>gi|326387170|ref|ZP_08208780.1| DNA repair protein RadC [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208351|gb|EGD59158.1| DNA repair protein RadC [Novosphingobium nitrogenifigens DSM 19370]
          Length = 301

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/97 (49%), Positives = 67/97 (69%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N L+ D+V S GT+D   +Y REI+ + + + A S+ILVHNHPSG+P PS ADI
Sbjct: 205 LYLNVQNRLLLDQVVSDGTLDESAIYTREIIGKAMAIGAASLILVHNHPSGSPQPSRADI 264

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +I     LNI+VHDH+IIG++  VS K   +I
Sbjct: 265 QVTQKVIEAGRHLNIVVHDHVIIGREGHVSLKAKGLI 301


>gi|162147769|ref|YP_001602230.1| putative DNA repair protein radC [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209542391|ref|YP_002274620.1| DNA repair protein RadC [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786346|emb|CAP55928.1| putative DNA repair protein radC [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209530068|gb|ACI50005.1| DNA repair protein RadC [Gluconacetobacter diazotrophicus PAl 5]
          Length = 221

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/92 (50%), Positives = 63/92 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+   LIADEV ++GTID  PVY RE+++R ++L A+ +ILVHNHP  NP PS  DI
Sbjct: 125 LFLDRGTRLIADEVLAQGTIDQTPVYPREVMRRAIQLKASELILVHNHPGWNPTPSREDI 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT+ +      L + V DH+I+G  A +SF+
Sbjct: 185 AMTRRLAQIATVLGLTVRDHVIVGNGASISFR 216


>gi|114767352|ref|ZP_01446159.1| DNA repair protein RadC [Pelagibaca bermudensis HTCC2601]
 gi|114540556|gb|EAU43631.1| DNA repair protein RadC [Roseovarius sp. HTCC2601]
          Length = 168

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/84 (52%), Positives = 64/84 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD+ N LI D++ SRG+IDHVPVY+ E+++  L L A+++IL HNHPSG+P PS ADI
Sbjct: 67  LLLDRKNKLIRDKIMSRGSIDHVPVYVSEVMRSALVLDASALILCHNHPSGDPQPSQADI 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           +MT+ I+     ++I +HDH+I+G
Sbjct: 127 DMTRKIVDACRVMDITLHDHLIVG 150


>gi|87199332|ref|YP_496589.1| DNA repair protein RadC [Novosphingobium aromaticivorans DSM 12444]
 gi|87135013|gb|ABD25755.1| DNA repair protein RadC [Novosphingobium aromaticivorans DSM 12444]
          Length = 245

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 67/97 (69%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N+LI D + S GT+D  P+Y RE++++ +++ A ++ILVHNHPSG+P PS ADI
Sbjct: 149 LYLNSQNMLILDHLVSEGTLDESPIYTREVIRKAMDVGAAAMILVHNHPSGSPKPSRADI 208

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++     + + VHDHI+IG++   S K   +I
Sbjct: 209 QVTQKVMEAARLMGMTVHDHIVIGREGHTSLKAQGLI 245


>gi|332188698|ref|ZP_08390412.1| DNA repair RadC family protein [Sphingomonas sp. S17]
 gi|332011262|gb|EGI53353.1| DNA repair RadC family protein [Sphingomonas sp. S17]
          Length = 229

 Score =  101 bits (251), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/97 (47%), Positives = 66/97 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N+LI DE+   G+ID  PVYIRE+++R ++  + ++ILVHNHPSG+P+PS ADI
Sbjct: 133 LHLNTRNMLIRDELMGEGSIDQAPVYIREVIRRAIDFGSAALILVHNHPSGDPSPSRADI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ I      L I VHDH+IIG    VS +   +I
Sbjct: 193 DVTRAIAEAGKRLGITVHDHLIIGTSGHVSLRAQGLI 229


>gi|197105875|ref|YP_002131252.1| DNA repair protein RadC [Phenylobacterium zucineum HLK1]
 gi|196479295|gb|ACG78823.1| DNA repair protein RadC [Phenylobacterium zucineum HLK1]
          Length = 256

 Score =  100 bits (250), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD      +DE   RGT+DH PVY+RE+++  L   A +++LVHNHPSG+P PS AD+
Sbjct: 159 IFLDASGAWSSDEELGRGTVDHAPVYVREVMREALRRDAAALVLVHNHPSGDPTPSAADV 218

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I    + L + V DH+++G     SF+ L ++
Sbjct: 219 QVTSEIAAAASALGMSVKDHLVVGSHGVASFQALGLL 255


>gi|258542143|ref|YP_003187576.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01]
 gi|256633221|dbj|BAH99196.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01]
 gi|256636280|dbj|BAI02249.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-03]
 gi|256639333|dbj|BAI05295.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-07]
 gi|256642389|dbj|BAI08344.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-22]
 gi|256645444|dbj|BAI11392.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-26]
 gi|256648497|dbj|BAI14438.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-32]
 gi|256651550|dbj|BAI17484.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654541|dbj|BAI20468.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-12]
          Length = 249

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/92 (50%), Positives = 63/92 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + L+AD+V  +GT+DH PVY REIV R L+L+AT ++LVHNHPSG+P PS  D+
Sbjct: 153 LFLNDKHELLADDVMGQGTVDHTPVYPREIVARALQLNATMLVLVHNHPSGDPTPSADDV 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT  I      +NI V DHII+  +  +S +
Sbjct: 213 VMTTQICGAAKIMNIHVWDHIIVAGEKLLSMR 244


>gi|149184792|ref|ZP_01863110.1| hypothetical protein ED21_28778 [Erythrobacter sp. SD-21]
 gi|148832112|gb|EDL50545.1| hypothetical protein ED21_28778 [Erythrobacter sp. SD-21]
          Length = 232

 Score = 97.1 bits (240), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 65/97 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI D + + G+ID   ++ RE+++R  ++ A+++ILVHNHPSG+P PS ADI
Sbjct: 136 LYLDTRNRLIDDHLAAEGSIDEAAIHPREVIRRAFDVGASALILVHNHPSGDPEPSRADI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      LNI VHDH+I+G+ + VS +   +I
Sbjct: 196 QITARIAEAGRLLNITVHDHVIVGRGSHVSLRAKGLI 232


>gi|329113315|ref|ZP_08242096.1| DNA repair protein RadC [Acetobacter pomorum DM001]
 gi|326697140|gb|EGE48800.1| DNA repair protein RadC [Acetobacter pomorum DM001]
          Length = 254

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 62/92 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ + L+ D+V  +GT+DH PVY REIV R L+L AT ++LVHNHPSG+P PS  D+
Sbjct: 158 LFLNEKHQLLVDDVMGQGTVDHTPVYPREIVSRALQLKATILVLVHNHPSGDPTPSADDV 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT  I      +NI V DHII+  +  +S +
Sbjct: 218 VMTTQICGAAKIMNIHVWDHIIVAGEKLLSMR 249


>gi|88606961|ref|YP_504859.1| DNA repair protein RadC [Anaplasma phagocytophilum HZ]
 gi|88598024|gb|ABD43494.1| DNA repair protein RadC [Anaplasma phagocytophilum HZ]
          Length = 232

 Score = 95.9 bits (237), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/92 (47%), Positives = 62/92 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   LIADEVQS GT+D  P+YIRE++++ L   A  I++ HNHPSG+P PS ADI
Sbjct: 136 LYLNKRYSLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPSKADI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N+T  +    N ++I + DH+I+      SFK
Sbjct: 196 NVTNKLRIACNSMDIELVDHVIVTSKRHYSFK 227


>gi|70608421|gb|AAZ04485.1| DNA repair protein RadC [Acetobacter aceti]
          Length = 147

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/92 (47%), Positives = 61/92 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + L+AD++  +GT+DH PVY REIV R L+L AT ++LVHNHPSG+P PS  D+
Sbjct: 51  LFLNDQHQLLADDIMGQGTVDHTPVYPREIVARALQLKATLLVLVHNHPSGDPTPSADDV 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT  I      +NI V DHII+  +  +  +
Sbjct: 111 VMTNQICGAAKIMNIHVWDHIIVAGEKLLCMR 142


>gi|85859097|ref|YP_461299.1| DNA repair protein [Syntrophus aciditrophicus SB]
 gi|85722188|gb|ABC77131.1| DNA repair protein [Syntrophus aciditrophicus SB]
          Length = 308

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/92 (46%), Positives = 64/92 (69%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +IA E   +G ++   VY R++++R L   ++++ILVHNHPSG   PSDADI
Sbjct: 210 LYLDTQNRIIAFETIQKGIVNQAVVYPRQVIERALSHKSSALILVHNHPSGFVKPSDADI 269

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ I  T   L+I+VHDH+IIG++ F SF+
Sbjct: 270 RLTRTITDTAKLLDIMVHDHLIIGENRFFSFR 301


>gi|330993528|ref|ZP_08317463.1| UPF0758 protein [Gluconacetobacter sp. SXCC-1]
 gi|329759558|gb|EGG76067.1| UPF0758 protein [Gluconacetobacter sp. SXCC-1]
          Length = 223

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/92 (47%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+   L+ADE+   GT++H PVY REI++R L L A  ++L HNHP+G   PS ADI
Sbjct: 126 LFLDEGFHLLADELMGTGTVNHSPVYPREIMRRALRLGAARLVLAHNHPAGRAEPSGADI 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT  I      + + VHDHII+G    +SF+
Sbjct: 186 EMTLRIAQLGRLMRVEVHDHIIVGNGRTLSFR 217


>gi|307294409|ref|ZP_07574253.1| DNA repair protein RadC [Sphingobium chlorophenolicum L-1]
 gi|306880560|gb|EFN11777.1| DNA repair protein RadC [Sphingobium chlorophenolicum L-1]
          Length = 245

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N+LI DE    G+ID   +Y RE+++R ++L + ++ILVHNHPSG+P PS  DI
Sbjct: 149 LHLNSRNMLIRDEHMGDGSIDQAAIYTREVIRRAIDLGSAALILVHNHPSGSPEPSRQDI 208

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      LNI VHDHIIIG     S +   +I
Sbjct: 209 EITRQIAEAGKRLNIAVHDHIIIGAQGHTSLRAKGLI 245


>gi|294084235|ref|YP_003550993.1| DNA repair protein RadC [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663808|gb|ADE38909.1| DNA repair protein RadC [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 247

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/94 (52%), Positives = 60/94 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LIA+E  S+GT+D  PVY+RE+V   L+  A S ILVHNHPSG   PS ADI
Sbjct: 151 LCLDNQNRLIAEETLSKGTVDQTPVYVREVVNAALKHHAQSSILVHNHPSGEAEPSRADI 210

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            MT  I   LN ++I +HDH+I+     VS K L
Sbjct: 211 EMTLAIQDALNIMSINLHDHLIVAGKQCVSLKTL 244


>gi|296283428|ref|ZP_06861426.1| hypothetical protein CbatJ_07394 [Citromicrobium bathyomarinum
           JL354]
          Length = 236

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/97 (47%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+ D     G+ID   ++ RE+++R L+L A ++ILVHNHPSGNP PS ADI
Sbjct: 140 LYLDTKNRLVQDHHVGDGSIDEASIHPREVIRRGLDLGAAALILVHNHPSGNPEPSRADI 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L I VHDH+IIG+  +VS K   +I
Sbjct: 200 AVTLRIAEAGRLLGIAVHDHVIIGQGRYVSLKAKGLI 236


>gi|294012255|ref|YP_003545715.1| DNA repair protein RadC [Sphingobium japonicum UT26S]
 gi|292675585|dbj|BAI97103.1| DNA repair protein RadC [Sphingobium japonicum UT26S]
          Length = 231

 Score = 94.0 bits (232), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N+LI DE    G+ID   +Y RE+++R ++L + ++ILVHNHPSG+P PS  DI
Sbjct: 135 LHLNSRNMLIRDEHMGDGSIDQAAIYAREVIRRAIDLGSAALILVHNHPSGSPEPSRQDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      LNI VHDHIIIG     S +   +I
Sbjct: 195 EITRQIAEAGKRLNIAVHDHIIIGTQGHSSLRAKGLI 231


>gi|260890567|ref|ZP_05901830.1| DNA repair protein RadC [Leptotrichia hofstadii F0254]
 gi|260859809|gb|EEX74309.1| DNA repair protein RadC [Leptotrichia hofstadii F0254]
          Length = 239

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N L+ +E   RGTID   VYIRE++++ LE +A S+ILVHNHP+G+  PSD+DI
Sbjct: 143 LFLNTQNELLKEEELFRGTIDRSTVYIRELIKKILEYNAKSVILVHNHPAGSLRPSDSDI 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      L I + DH+II +  + SF
Sbjct: 203 RLTKKVKEVFESLEIRLLDHLIISEKGYFSF 233


>gi|85374339|ref|YP_458401.1| hypothetical protein ELI_07560 [Erythrobacter litoralis HTCC2594]
 gi|84787422|gb|ABC63604.1| hypothetical protein ELI_07560 [Erythrobacter litoralis HTCC2594]
          Length = 236

 Score = 93.6 bits (231), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 63/97 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LI D     G+ID   ++ RE+++R L++ AT++ILVHNHPSGNP PS AD+
Sbjct: 140 LYLNAQNRLIQDHHVGDGSIDEAAIHPREVIKRGLDIGATALILVHNHPSGNPEPSRADV 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L I VHDH+I+G++  VS +   +I
Sbjct: 200 QITTRIAEAGRLLGITVHDHVIVGREGHVSLRAKGLI 236


>gi|94498367|ref|ZP_01304925.1| hypothetical protein SKA58_11765 [Sphingomonas sp. SKA58]
 gi|94422122|gb|EAT07165.1| hypothetical protein SKA58_11765 [Sphingomonas sp. SKA58]
          Length = 231

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 62/92 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N+LI D+    G+ID   +Y RE+++R ++L + ++ILVHNHPSG+P+PS  DI
Sbjct: 135 LHLNSRNMLIRDDHMGDGSIDQAAIYTREVIRRAIDLGSAALILVHNHPSGDPSPSRQDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ II     LNI VHDH+II     VS +
Sbjct: 195 DVTRQIIDAGKRLNISVHDHVIIAGQGHVSLR 226


>gi|310778318|ref|YP_003966651.1| DNA repair protein RadC [Ilyobacter polytropus DSM 2926]
 gi|309747641|gb|ADO82303.1| DNA repair protein RadC [Ilyobacter polytropus DSM 2926]
          Length = 225

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 62/96 (64%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N L+ +E   +GTID   VY R IV++ L+  A S+I  HNHPSGN NPS ADI
Sbjct: 129 IFLDTANNLLCEETLFKGTIDRSGVYPRNIVEKVLKHGAKSVIFAHNHPSGNLNPSKADI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           + T  I   LN + I V DH+II +D++ SF  KGL
Sbjct: 189 DFTDKITKVLNAIEIRVLDHMIITRDSYFSFLEKGL 224


>gi|85708932|ref|ZP_01039998.1| DNA repair protein RadC [Erythrobacter sp. NAP1]
 gi|85690466|gb|EAQ30469.1| DNA repair protein RadC [Erythrobacter sp. NAP1]
          Length = 272

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 64/97 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI D     G+ID   ++ RE+++R +++ A+++ILVHNHPSG+P PS AD+
Sbjct: 176 LYLDAKNRLIDDHHVGDGSIDEAAIHPREVIRRAMDVGASALILVHNHPSGSPEPSRADV 235

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I      L + +HDH+I+G++  VS +   +I
Sbjct: 236 QITQKIAEAGRLLGVTLHDHVIVGREGHVSLRAKGLI 272


>gi|15893201|ref|NP_360915.1| putative DNA repair protein (RadC) [Rickettsia conorii str. Malish
           7]
 gi|15620416|gb|AAL03816.1| DNA repair protein (RadC)-like protein [Rickettsia conorii str.
           Malish 7]
          Length = 122

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 58/77 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NILIADEV S+GTID   VY REI++R L   A+S+ILVH+HPSG+P PS A+I
Sbjct: 36  LFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASSLILVHHHPSGSPEPSKANI 95

Query: 61  NMTQNIITTLNPLNIIV 77
           +MT  I+     +NIIV
Sbjct: 96  HMTNKIVEKCQTINIIV 112


>gi|157829113|ref|YP_001495355.1| hypothetical protein A1G_07030 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933837|ref|YP_001650626.1| DNA repair protein [Rickettsia rickettsii str. Iowa]
 gi|157801594|gb|ABV76847.1| hypothetical protein A1G_07030 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908924|gb|ABY73220.1| DNA repair protein [Rickettsia rickettsii str. Iowa]
          Length = 122

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 58/77 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NILIADEV S+GTID   VY REI++R L   A+S+ILVH+HPSG+P PS  +I
Sbjct: 36  LFLNKKNILIADEVLSQGTIDQATVYPREIIKRALFNEASSLILVHHHPSGSPEPSKTNI 95

Query: 61  NMTQNIITTLNPLNIIV 77
           +MT  I+ T   +NIIV
Sbjct: 96  HMTNKIVETCQTVNIIV 112


>gi|253583728|ref|ZP_04860926.1| DNA repair protein RadC [Fusobacterium varium ATCC 27725]
 gi|251834300|gb|EES62863.1| DNA repair protein RadC [Fusobacterium varium ATCC 27725]
          Length = 229

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/91 (50%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N LIA E    GTID   VY REIV+R ++  A S++  HNHPSGN +PS  DI
Sbjct: 131 LFLNSANNLIASETLFYGTIDKSAVYPREIVERVIKNGAKSVVFAHNHPSGNISPSKQDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ++  +L  L+I + DHIII KD++ SF
Sbjct: 191 ELTQHMYDSLKTLDIRLIDHIIITKDSYFSF 221


>gi|296115179|ref|ZP_06833820.1| DNA repair protein RadC [Gluconacetobacter hansenii ATCC 23769]
 gi|295978280|gb|EFG85017.1| DNA repair protein RadC [Gluconacetobacter hansenii ATCC 23769]
          Length = 230

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    LI D V   GT+D  PVY RE+++R L+L A  +IL HNHPSG+P PS  DI
Sbjct: 129 LFLDAEYRLIEDRVMGVGTVDQAPVYPREVMRRALDLDARILILAHNHPSGDPMPSATDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT +I    + + I +HDH ++G    +SF+ + +I
Sbjct: 189 QMTLHIQQVASVMGIHLHDHFVVGNGRSISFRRMGLI 225


>gi|34581128|ref|ZP_00142608.1| hypothetical DNA repair protein (RadC) [Rickettsia sibirica 246]
 gi|28262513|gb|EAA26017.1| hypothetical DNA repair protein (RadC) [Rickettsia sibirica 246]
          Length = 122

 Score = 91.3 bits (225), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 58/77 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NILIADEV S+ TID   VY REI++R L   A+S+ILVH+HPSG+P PS A+I
Sbjct: 36  LFLNKKNILIADEVLSQETIDQAAVYPREIIKRALFNEASSLILVHHHPSGSPEPSKANI 95

Query: 61  NMTQNIITTLNPLNIIV 77
           +MT  I+ T   +NIIV
Sbjct: 96  HMTNKIVETCQTVNIIV 112


>gi|254995210|ref|ZP_05277400.1| DNA repair protein (radC) [Anaplasma marginale str. Mississippi]
          Length = 230

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 63/92 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   +IADE+Q+ GTID  P+Y+RE+V++ L   A+ I++ HNHPSG+P PS ADI
Sbjct: 134 LYLNKKYRIIADEIQNTGTIDEAPLYVREVVKKSLLHDASYIVVSHNHPSGDPKPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T  +      +NI++ DH+II      SFK
Sbjct: 194 HITNRLQEACCSMNIVLVDHVIITPKRHYSFK 225


>gi|56417029|ref|YP_154103.1| DNA repair protein [Anaplasma marginale str. St. Maries]
 gi|222475397|ref|YP_002563814.1| DNA repair protein (radC) [Anaplasma marginale str. Florida]
 gi|255003383|ref|ZP_05278347.1| DNA repair protein (radC) [Anaplasma marginale str. Puerto Rico]
 gi|255004504|ref|ZP_05279305.1| DNA repair protein (radC) [Anaplasma marginale str. Virginia]
 gi|56388261|gb|AAV86848.1| DNA repair protein [Anaplasma marginale str. St. Maries]
 gi|222419535|gb|ACM49558.1| DNA repair protein (radC) [Anaplasma marginale str. Florida]
          Length = 230

 Score = 90.9 bits (224), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 63/92 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   +IADE+Q+ GTID  P+Y+RE+V++ L   A+ I++ HNHPSG+P PS ADI
Sbjct: 134 LYLNKKYRIIADEIQNTGTIDETPLYVREVVKKSLLHDASYIVVSHNHPSGDPKPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T  +      +NI++ DH+II      SFK
Sbjct: 194 HITNRLQEACCSMNIVLVDHVIITPKRHYSFK 225


>gi|269958556|ref|YP_003328343.1| DNA repair protein RadC [Anaplasma centrale str. Israel]
 gi|269848385|gb|ACZ49029.1| DNA repair protein RadC [Anaplasma centrale str. Israel]
          Length = 230

 Score = 90.5 bits (223), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 63/92 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   +IADE+Q+ GTID  P+Y+RE+V++ L   A+ I++ HNHPSG+P PS ADI
Sbjct: 134 LYLNKKYRVIADEIQNTGTIDETPLYVREVVKKSLLHDASYIVVSHNHPSGDPKPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T  +      +NI++ DH+II      SFK
Sbjct: 194 HITNRLQEACCSMNIVLVDHVIITPKRHYSFK 225


>gi|73667265|ref|YP_303281.1| DNA repair protein RadC [Ehrlichia canis str. Jake]
 gi|72394406|gb|AAZ68683.1| DNA repair protein RadC [Ehrlichia canis str. Jake]
          Length = 230

 Score = 90.5 bits (223), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 61/92 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+    L+ADE Q  GT++  P+YIRE++++ L L ATSII+ HNHPSG+  PS ADI
Sbjct: 134 LYLNTKYKLLADETQDVGTVNQTPLYIREVIKKSLSLGATSIIIAHNHPSGDARPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T  +  T N + I + DH+I+  +   SFK
Sbjct: 194 EITNQLAITCNNIGITLIDHVIVTSNDHYSFK 225


>gi|58617393|ref|YP_196592.1| DNA repair protein radC-like protein [Ehrlichia ruminantium str.
           Gardel]
 gi|58417005|emb|CAI28118.1| DNA repair protein radC homolog [Ehrlichia ruminantium str. Gardel]
          Length = 230

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 61/92 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+    L+ADE+Q  GT++  P+YIRE++++ L L ATSII+ HNHPSG+  PS ADI
Sbjct: 134 LYLNTKFKLLADEIQDVGTVNQTPLYIREVIKKSLLLGATSIIIAHNHPSGDATPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T  +    N + I + DH+I+  +   SFK
Sbjct: 194 EVTNQLAIACNNMGITLIDHVIVTSNTHYSFK 225


>gi|42520237|ref|NP_966152.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42409975|gb|AAS14086.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 224

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 69/97 (71%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++++K   LIA+++Q+ GT+D  P+Y+REI++R L + +TSI++ HNHPSG+  PS++DI
Sbjct: 128 IYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSGDTQPSNSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DHIII   ++ SFK  R++
Sbjct: 188 SLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 224


>gi|68171315|ref|ZP_00544714.1| DNA repair protein RadC [Ehrlichia chaffeensis str. Sapulpa]
 gi|88658430|ref|YP_507183.1| DNA repair protein RadC [Ehrlichia chaffeensis str. Arkansas]
 gi|67999266|gb|EAM85917.1| DNA repair protein RadC [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599887|gb|ABD45356.1| DNA repair protein RadC [Ehrlichia chaffeensis str. Arkansas]
          Length = 230

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 61/92 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+    L+ADE Q  GT++  P+Y+REI+++ L L ATSII+ HNHPSG+  PS ADI
Sbjct: 134 LYLNTKYKLLADETQDVGTVNQTPLYVREIIKKSLFLEATSIIIAHNHPSGDAKPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T  +    + + I + DH+I+  +A  SFK
Sbjct: 194 EITNQLARACSDVGITLIDHVIVTSNAHYSFK 225


>gi|257469304|ref|ZP_05633398.1| DNA repair protein radC [Fusobacterium ulcerans ATCC 49185]
 gi|317063551|ref|ZP_07928036.1| DNA repair protein radC [Fusobacterium ulcerans ATCC 49185]
 gi|313689227|gb|EFS26062.1| DNA repair protein radC [Fusobacterium ulcerans ATCC 49185]
          Length = 229

 Score = 89.4 bits (220), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/91 (49%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N LIA E    GTID   VY REIV+R +   A S++  HNHPSGN +PS  DI
Sbjct: 131 LFLNSANNLIASETLFYGTIDKSAVYPREIVERTIRNGAKSVVFAHNHPSGNISPSKQDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ++  +L  L+I + DHIII K+++ SF
Sbjct: 191 ELTQHMYDSLKTLDIRLIDHIIITKNSYFSF 221


>gi|260774468|ref|ZP_05883382.1| DNA repair protein RadC [Vibrio metschnikovii CIP 69.14]
 gi|260610595|gb|EEX35800.1| DNA repair protein RadC [Vibrio metschnikovii CIP 69.14]
          Length = 224

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  EV   GTID   VY RE+V+R L+L+A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIQGEVLFEGTIDAASVYPREVVKRALQLNAAALILAHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ ++  L  ++I V DH +IG    VSF
Sbjct: 188 RITQRLVDALQLVDIRVLDHFVIGDGEVVSF 218


>gi|257126874|ref|YP_003164988.1| DNA repair protein RadC [Leptotrichia buccalis C-1013-b]
 gi|257050813|gb|ACV39997.1| DNA repair protein RadC [Leptotrichia buccalis C-1013-b]
          Length = 240

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N L+ +E    GTID   +YIRE++++ LE +A S+ILVHNHP+G+  PSD+DI
Sbjct: 144 LFLNTQNELMKEEELFYGTIDRSTIYIRELIKKILEYNAKSVILVHNHPAGSLKPSDSDI 203

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      + I + DH+II +  + SF
Sbjct: 204 LLTKKVKEVFESMEIRLLDHLIISEQGYFSF 234


>gi|99034812|ref|ZP_01314730.1| hypothetical protein Wendoof_01000450 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 116

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 69/97 (71%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++++K   LIA+++++ GT+D  P+Y+REI++R L + +TSI++ HNHPSG+  PS++DI
Sbjct: 20  IYMNKKYRLIAEDLENIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSGDTQPSNSDI 79

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DHIII   ++ SFK  R++
Sbjct: 80  SLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 116


>gi|254463516|ref|ZP_05076932.1| DNA repair protein RadC [Rhodobacterales bacterium HTCC2083]
 gi|206680105|gb|EDZ44592.1| DNA repair protein RadC [Rhodobacteraceae bacterium HTCC2083]
          Length = 253

 Score = 87.8 bits (216), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/91 (56%), Positives = 69/91 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N+LIADE    GT+DHVPVY RE+++R LEL++ +IILVHNHPSG+P+PS +DI
Sbjct: 157 LFLNRRNMLIADETLGVGTVDHVPVYPREVLKRALELNSCAIILVHNHPSGDPSPSSSDI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT+ I    + L+I +HDH+IIG     SF
Sbjct: 217 EMTKLIKQAADSLSITLHDHLIIGATGETSF 247


>gi|291288346|ref|YP_003505162.1| DNA repair protein RadC [Denitrovibrio acetiphilus DSM 12809]
 gi|290885506|gb|ADD69206.1| DNA repair protein RadC [Denitrovibrio acetiphilus DSM 12809]
          Length = 221

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD +  L+  E   +GT+D + VY REI +R +   AT +I+ HNHPSGN +PS+ DI
Sbjct: 125 LFLDVNKKLLGFENLFKGTVDRLAVYPREIAERAITSKATHVIVAHNHPSGNMSPSETDI 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +I  L  L+I + DHIII    F SFK  ++I
Sbjct: 185 TLTDKLIKALAALDINLADHIIITTKGFYSFKREQVI 221


>gi|57239372|ref|YP_180508.1| DNA repair protein radC-like protein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579339|ref|YP_197551.1| DNA repair protein radC-like protein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161451|emb|CAH58376.1| DNA repair protein RadC [Ehrlichia ruminantium str. Welgevonden]
 gi|58417965|emb|CAI27169.1| DNA repair protein radC homolog [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 230

 Score = 87.4 bits (215), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 61/92 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+    L+ADE+Q  GT++  P+YIRE++++ L L ATSII+ HNHPSG+  PS ADI
Sbjct: 134 LYLNTKFKLLADEIQDVGTVNQTPLYIREVIKKSLLLGATSIIIAHNHPSGDATPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T  +    + + I + DH+I+  +   SFK
Sbjct: 194 EVTNQLAIACHNMGITLIDHVIVTSNTHYSFK 225


>gi|254516157|ref|ZP_05128217.1| DNA repair protein RadC [gamma proteobacterium NOR5-3]
 gi|219675879|gb|EED32245.1| DNA repair protein RadC [gamma proteobacterium NOR5-3]
          Length = 132

 Score = 87.0 bits (214), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 45/84 (53%), Positives = 57/84 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGTID   VY R +V+R LEL+A ++IL HNHPSG PNPS AD 
Sbjct: 36  LFLDSQHRLIAFERLFRGTIDGASVYPRVVVKRALELNAAALILTHNHPSGLPNPSSADS 95

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +TQ +   L  ++I V DHI++G
Sbjct: 96  KITQRLQDALALVDIRVLDHIVVG 119


>gi|213019650|ref|ZP_03335455.1| DNA repair protein RadC [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212994691|gb|EEB55334.1| DNA repair protein RadC [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 118

 Score = 87.0 bits (214), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 67/97 (69%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++++K   LIA+++Q+ GT+D  P+Y+REI++R L + +TSI++ HNHPSG+  PS +D+
Sbjct: 20  IYMNKRYRLIAEDLQNFGTVDQTPIYVREIIRRALLIGSTSIVISHNHPSGDIQPSSSDM 79

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I + DHIII   ++ SFK  R++
Sbjct: 80  FLTRQLAEACKSIGIELIDHIIITFSSYFSFKENRLL 116


>gi|37678469|ref|NP_933078.1| DNA repair protein RadC [Vibrio vulnificus YJ016]
 gi|320157667|ref|YP_004190046.1| DNA repair protein RadC [Vibrio vulnificus MO6-24/O]
 gi|326423775|ref|NP_759802.2| DNA repair protein RadC [Vibrio vulnificus CMCP6]
 gi|32129962|sp|Q8DDY0|Y825_VIBVU RecName: Full=UPF0758 protein VV1_0825
 gi|54036231|sp|Q7MPS7|Y285_VIBVY RecName: Full=UPF0758 protein VV0285
 gi|37197209|dbj|BAC93049.1| DNA repair protein [Vibrio vulnificus YJ016]
 gi|319932979|gb|ADV87843.1| DNA repair protein RadC [Vibrio vulnificus MO6-24/O]
 gi|319999137|gb|AAO09329.2| DNA repair protein RadC [Vibrio vulnificus CMCP6]
          Length = 224

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I DEV   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQNRVIKDEVMFEGTIDAASVYPREVVKRALHYNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  ++I V DH ++G    VSF
Sbjct: 188 RITRRLSDALGLVDIRVLDHFVVGDGEVVSF 218


>gi|83649010|ref|YP_437445.1| DNA repair protein [Hahella chejuensis KCTC 2396]
 gi|83637053|gb|ABC33020.1| DNA repair protein [Hahella chejuensis KCTC 2396]
          Length = 207

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 43/87 (49%), Positives = 58/87 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI+ E    GTID   VY REIV+R L L+A ++IL HNHPSG   PS ADI
Sbjct: 108 MFLDNQNRLISFEKLFYGTIDQASVYPREIVKRALMLNAAAVILAHNHPSGMSEPSVADI 167

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA 87
            MT+ + ++L  +++ V DHI++G D 
Sbjct: 168 AMTKTVKSSLALIDVRVLDHIVVGSDG 194


>gi|328954004|ref|YP_004371338.1| DNA repair protein RadC [Desulfobacca acetoxidans DSM 11109]
 gi|328454328|gb|AEB10157.1| DNA repair protein RadC [Desulfobacca acetoxidans DSM 11109]
          Length = 230

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +IA+E    GT+D   VY R++++  L+  AT +ILVHNHPSG   PS AD 
Sbjct: 134 IFLNSQNEVIAEETIQEGTVDQTVVYPRKVLEAALKHKATGLILVHNHPSGRLTPSTADR 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II    PL I VHDH+II K    S 
Sbjct: 194 ELTRAIIQAAQPLAITVHDHLIISKQGHYSM 224


>gi|58697136|ref|ZP_00372568.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|225630223|ref|YP_002727014.1| DNA repair protein RadC [Wolbachia sp. wRi]
 gi|58536565|gb|EAL59914.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|225592204|gb|ACN95223.1| DNA repair protein RadC [Wolbachia sp. wRi]
          Length = 224

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 68/97 (70%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++++K   LIA+++Q+ GT+D  P+Y+REI++R L + +TSI++ HNHPS +  PS++DI
Sbjct: 128 IYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPSNSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DHIII   ++ SFK  R++
Sbjct: 188 SLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 224


>gi|58698852|ref|ZP_00373725.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534631|gb|EAL58757.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 225

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 68/97 (70%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++++K   LIA+++Q+ GT+D  P+Y+REI++R L + +TSI++ HNHPS +  PS++DI
Sbjct: 129 IYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPSNSDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DHIII   ++ SFK  R++
Sbjct: 189 SLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 225


>gi|269103917|ref|ZP_06156614.1| DNA repair protein RadC [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163815|gb|EEZ42311.1| DNA repair protein RadC [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 224

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/91 (50%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTID   VY REIV+R LEL+A + IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVICGEALFFGTIDSASVYPREIVKRSLELNAAAAILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ I   L  ++I V DH +IG    VSF
Sbjct: 188 RITQKISDALALVDIRVLDHFVIGDGELVSF 218


>gi|268325704|emb|CBH39292.1| probable DNA repair protein radC homolog [uncultured archaeon]
          Length = 330

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/91 (46%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N  I DE    GT++   VY REIV+  +  +A S+I VHNHPSG+P PS +D 
Sbjct: 215 IFLDSANQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDR 274

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+++I   N + I V DHIIIG + + SF
Sbjct: 275 AITEDLIYACNLVQITVLDHIIIGDNVYFSF 305


>gi|260779661|ref|ZP_05888551.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604470|gb|EEX30774.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450]
          Length = 220

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DEV   GTID   +Y RE+V+R LE +A ++IL HNHPSG   PS AD 
Sbjct: 124 LFLDNQHRVIKDEVMFEGTIDAASIYPREVVKRALEHNAAALILAHNHPSGVAEPSQADR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ I   L  ++I + DH ++G    +SF
Sbjct: 184 RITQRISDALALVDIRILDHFVVGDGDVISF 214


>gi|54307423|ref|YP_128443.1| DNA repair protein RadC [Photobacterium profundum SS9]
 gi|54036225|sp|Q6LVN4|Y202_PHOPR RecName: Full=UPF0758 protein PBPRA0202
 gi|46911843|emb|CAG18641.1| putative DNA repair protein RadC [Photobacterium profundum SS9]
          Length = 224

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA EV   GTI+   VY REIV+R LE +A ++IL HNHPSG   PS +D+
Sbjct: 128 LFLDNQHRVIAGEVLFEGTINSAAVYPREIVKRSLEFNAVALILAHNHPSGVAEPSQSDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I   L  ++I V DH I+G    VSF
Sbjct: 188 RITRTISDALALVDIRVLDHFIVGDGEIVSF 218


>gi|331005821|ref|ZP_08329177.1| DNA repair protein [gamma proteobacterium IMCC1989]
 gi|330420360|gb|EGG94670.1| DNA repair protein [gamma proteobacterium IMCC1989]
          Length = 169

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + +I  E+   GTID   VY RE+V+  L+ +A +IIL HNHPSG+P PS AD 
Sbjct: 73  IYLDSQHGIIDFEILFHGTIDAASVYPREVVKSALKYNAAAIILAHNHPSGSPEPSSADK 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  IIT L  ++I V DH+I+G    +SF  L ++
Sbjct: 133 RITDQIITALKTVDIRVLDHLIVGGTQSISFAELGLL 169


>gi|90580921|ref|ZP_01236723.1| DNA repair protein RadC [Vibrio angustum S14]
 gi|90437992|gb|EAS63181.1| DNA repair protein RadC [Vibrio angustum S14]
          Length = 224

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  EV   GTID   VY RE+V+R LEL+A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVITGEVLFEGTIDCASVYPREVVKRSLELNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I  +L  ++I V DH ++G    +SF
Sbjct: 188 RITRKISDSLALVDIRVLDHFVVGDGEIISF 218


>gi|307546416|ref|YP_003898895.1| DNA repair protein RadC [Halomonas elongata DSM 2581]
 gi|307218440|emb|CBV43710.1| DNA repair protein RadC [Halomonas elongata DSM 2581]
          Length = 224

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   RGT+D   VY RE+ +R LEL A ++I  HNHPSG   PSDAD 
Sbjct: 128 LFLDSQHRVIRYESLFRGTLDSASVYPREVARRALELGAGALIFAHNHPSGVAEPSDADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L    + V DH ++G    VSF  +GL
Sbjct: 188 RITERLRQALELFEVRVLDHFVVGDGEVVSFAERGL 223


>gi|317154521|ref|YP_004122569.1| DNA repair protein RadC [Desulfovibrio aespoeensis Aspo-2]
 gi|316944772|gb|ADU63823.1| DNA repair protein RadC [Desulfovibrio aespoeensis Aspo-2]
          Length = 227

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           F+D  N +IA E  S+GT+D  PV+ REI+   L L A ++IL HNHP G+P PS  D++
Sbjct: 132 FMDSKNRVIAWEQVSKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPTPSREDLD 191

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           +T+ I  T   L I + DHII+    + SF
Sbjct: 192 LTRRIRDTAQGLGIRILDHIIVTDHEYYSF 221


>gi|269123054|ref|YP_003305631.1| DNA repair protein RadC [Streptobacillus moniliformis DSM 12112]
 gi|268314380|gb|ACZ00754.1| DNA repair protein RadC [Streptobacillus moniliformis DSM 12112]
          Length = 211

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+ +  N+LI DE    GTID   VY+REIV+  L+ +A SII+VHNHPSGN  PS+ D 
Sbjct: 115 LYFNTKNVLIKDENIFYGTIDKSVVYVREIVKNILKYNAKSIIIVHNHPSGNLEPSNDDR 174

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II  L  +++ + DHIII    + SF
Sbjct: 175 CLTKKIIDVLKLIDVRLSDHIIISNKGYYSF 205


>gi|237730257|ref|ZP_04560738.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226905796|gb|EEH91714.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 158

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LIA E    GTI+   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 62  LYLDNQNQLIAHETLFSGTINRTEVYPREVVKRALYFNAAAVILAHNHPSGETTPSQADK 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  ++I V DH+I+G     SF
Sbjct: 122 ALTQRLTQVLQLVDIRVPDHLIVGGRQIYSF 152


>gi|88813088|ref|ZP_01128330.1| DNA repair protein RadC [Nitrococcus mobilis Nb-231]
 gi|88789721|gb|EAR20846.1| DNA repair protein RadC [Nitrococcus mobilis Nb-231]
          Length = 224

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGTID   VY RE+V+R LE +A ++I+ HNHPSG   PS AD 
Sbjct: 128 LFLDNRNRLIAFEELFRGTIDAASVYPREVVRRALERNAAALIVAHNHPSGVSEPSRADA 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  ++I + DH ++G    VS   +GL
Sbjct: 188 MLTQRLREALALVDIRLLDHFVVGDSEVVSLAERGL 223


>gi|323527115|ref|YP_004229268.1| DNA repair protein RadC [Burkholderia sp. CCGE1001]
 gi|323384117|gb|ADX56208.1| DNA repair protein RadC [Burkholderia sp. CCGE1001]
          Length = 254

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  +RGT+  + VY REIV+R L L+A S+I+ HNHPSG   PS +D 
Sbjct: 158 LFLDARHRLIRSEESARGTLTRMAVYPREIVRRALALNAASLIVAHNHPSGAVQPSASDC 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH++IG D+  SF
Sbjct: 218 RLTRTLREALALIDVQLVDHLVIGADSVYSF 248


>gi|319943236|ref|ZP_08017519.1| DNA repair protein RadC [Lautropia mirabilis ATCC 51599]
 gi|319743778|gb|EFV96182.1| DNA repair protein RadC [Lautropia mirabilis ATCC 51599]
          Length = 278

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + LI  ++  RGT++   VY RE+++  L+L+A ++IL HNHPSG+P PSDAD+
Sbjct: 182 LFLNSQHRLITADMMFRGTVNQTAVYPREVLKHALKLNAAAVILSHNHPSGHPEPSDADL 241

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ +   L  ++I V DHII+      SF
Sbjct: 242 SLTRTLQAVLGQVDIRVLDHIIVAGSQQYSF 272


>gi|237736412|ref|ZP_04566893.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
 gi|229421454|gb|EEO36501.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
          Length = 154

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N LIA++    GTID   VY R +++  L  ++  +IL HNHPSGN  PS  DI
Sbjct: 58  LFLNNANKLIAEKTLFYGTIDKSAVYPRVVLEEVLRYNSAGVILAHNHPSGNLRPSKQDI 117

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +   L  +N++V DH+IIG D + SF+
Sbjct: 118 QLTEALQELLEKINVMVLDHMIIGDDEYFSFR 149


>gi|170693582|ref|ZP_02884740.1| DNA repair protein RadC [Burkholderia graminis C4D1M]
 gi|170141364|gb|EDT09534.1| DNA repair protein RadC [Burkholderia graminis C4D1M]
          Length = 254

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  +RGT+  + VY REIV+R L L+A S+I+ HNHPSG   PS +D 
Sbjct: 158 LFLDARHRLIRSEESARGTLTRMAVYPREIVRRALALNAASLIVAHNHPSGAVQPSASDC 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ +   L  +++ + DH++IG D+  SF
Sbjct: 218 SLTRTLREALALIDVQLVDHLVIGADSVYSF 248


>gi|262040687|ref|ZP_06013925.1| DNA repair protein RadC [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042051|gb|EEW43084.1| DNA repair protein RadC [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 221

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++++A ++IL HNHPSG+P PS AD 
Sbjct: 125 IFLDNQNRVLKHSRLFSGTLSHVEVHPREIVREAIKVNAAAVILAHNHPSGSPEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I     + I V DH++IG+ A+VSF
Sbjct: 185 LITERVIKCCRFMEIRVLDHLVIGRGAYVSF 215


>gi|268325239|emb|CBH38827.1| probable DNA repair protein radC homolog [uncultured archaeon]
          Length = 329

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N  I DE    GT++   VY REIV+  +  +A S+I VHNHPSG+P PS +D 
Sbjct: 214 IFLDSANQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDR 273

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T++++   N + I V DHIIIG + + SF
Sbjct: 274 AITEDLVYACNLVQITVLDHIIIGDNVYFSF 304


>gi|152972484|ref|YP_001337630.1| DNA repair protein RadC [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238897079|ref|YP_002921825.1| DNA repair protein RadC [Klebsiella pneumoniae NTUH-K2044]
 gi|329996935|ref|ZP_08302632.1| DNA repair protein RadC [Klebsiella sp. MS 92-3]
 gi|166218784|sp|A6TFM9|Y3939_KLEP7 RecName: Full=UPF0758 protein KPN78578_39390
 gi|150957333|gb|ABR79363.1| DNA repair protein RadC [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238549407|dbj|BAH65758.1| DNA repair protein [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|328539225|gb|EGF65254.1| DNA repair protein RadC [Klebsiella sp. MS 92-3]
          Length = 221

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++++A ++IL HNHPSG+P PS AD 
Sbjct: 125 IFLDNQNRVLKHSRLFSGTLSHVEVHPREIVREAIKVNAAAVILAHNHPSGSPEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I     + I V DH++IG+ A+VSF
Sbjct: 185 LITERVIKCCRFMEIRVLDHLVIGRGAYVSF 215


>gi|317403649|gb|EFV84137.1| hypothetical protein HMPREF0005_02879 [Achromobacter xylosoxidans
           C54]
          Length = 149

 Score = 84.3 bits (207), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D    L++ E    GT+D  PVY RE+ +R L L+A ++++ HNHPSGN  PS+ADI
Sbjct: 52  LFMDSQLRLLSAEPLFYGTLDQAPVYPREVARRALMLNAAALVIAHNHPSGNHTPSNADI 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT ++   L   +I + DH ++G     SF  L ++
Sbjct: 112 RMTTSLREALGLFDIRLLDHFVVGAGKMTSFAELGLM 148


>gi|255019864|ref|ZP_05291939.1| DNA repair protein RadC [Acidithiobacillus caldus ATCC 51756]
 gi|254970644|gb|EET28131.1| DNA repair protein RadC [Acidithiobacillus caldus ATCC 51756]
          Length = 224

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 2/93 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           LFLD +H +L  +E+  +GTID   VY+RE+ +R LEL+A ++I+ HNHPSG   PS AD
Sbjct: 128 LFLDNRHRVLRFEEL-FQGTIDAASVYVREVAKRALELNAAALIVAHNHPSGVAEPSLAD 186

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             +TQ +   L  L+I + DH ++G+   VS +
Sbjct: 187 RQLTQRLEQALELLDIRLLDHFVVGETQAVSLR 219


>gi|294340312|emb|CAZ88693.1| DNA repair protein radC [Thiomonas sp. 3As]
          Length = 226

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E  SRGT+    VY RE+V+  L L+A ++IL HNHPSG   PS AD 
Sbjct: 130 LFLDSQHQLIASEELSRGTLASTSVYPREVVKAALRLNAGALILAHNHPSGLAEPSAADR 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ + + L  +++ V DH+++ + + VSF  +GL
Sbjct: 190 ALTQTLKSALALVDVRVLDHLVVTRHSVVSFAERGL 225


>gi|283856582|ref|YP_003377816.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775591|gb|ADB28982.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 169

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI       GTID  PVY RE+V+  L L+A ++IL HNHPSGNP PS AD 
Sbjct: 73  LFLDTRHRLIEYREMFHGTIDSAPVYPREVVKEALRLNAAAVILSHNHPSGNPEPSQADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  +++ V DH+I+      SF  +GL
Sbjct: 133 VLTQRLKKALGLVDMRVLDHVIVAGSTTESFAERGL 168


>gi|242239772|ref|YP_002987953.1| DNA repair protein RadC [Dickeya dadantii Ech703]
 gi|242131829|gb|ACS86131.1| DNA repair protein RadC [Dickeya dadantii Ech703]
          Length = 169

 Score = 84.3 bits (207), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD H+ LI       GTID   VY RE+V+  L L+A ++IL HNHPSGNP PS AD 
Sbjct: 73  LFLDTHHQLIEYREMFHGTIDSASVYPREVVKEALRLNAAAVILSHNHPSGNPEPSSADK 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  + +   DH+I+     VSF  +GL
Sbjct: 133 ALTQRLKEALGLVEVRTLDHVIVAGADTVSFAERGL 168


>gi|307730752|ref|YP_003907976.1| DNA repair protein RadC [Burkholderia sp. CCGE1003]
 gi|307585287|gb|ADN58685.1| DNA repair protein RadC [Burkholderia sp. CCGE1003]
          Length = 214

 Score = 84.3 bits (207), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  +RGT+  + VY REIV+R L L+A S+I+ HNHPSG   PS +D 
Sbjct: 118 LFLDARHRLIRSEESARGTLTRMAVYPREIVRRALALNAASLIVAHNHPSGAVQPSASDC 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+++   L  +++ + DH++IG +   SF
Sbjct: 178 SLTRSLREALALIDVQLVDHLVIGAEGVYSF 208


>gi|298529740|ref|ZP_07017143.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511176|gb|EFI35079.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1]
          Length = 238

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + +D  N LI  E  SRGT+D  PV+ REI+   LE  A+ +IL+HNHP G+P+PS  D 
Sbjct: 142 IMVDNKNRLIDFEKMSRGTVDQAPVFPREILTVALEKRASGVILLHNHPGGDPHPSFQDR 201

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ I      L + + DH+II +D+F SF+
Sbjct: 202 ELTRKIREVSTALGVRLLDHVIISEDSFFSFQ 233


>gi|92115088|ref|YP_575016.1| DNA repair protein RadC [Chromohalobacter salexigens DSM 3043]
 gi|122419198|sp|Q1QT91|Y2972_CHRSD RecName: Full=UPF0758 protein Csal_2972
 gi|91798178|gb|ABE60317.1| DNA replication and repair protein RadC [Chromohalobacter
           salexigens DSM 3043]
          Length = 224

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E  S+GT+D   VY RE+ +R L L+A ++I  HNHPSG   PSDAD 
Sbjct: 128 LFLDTQHRVIRFETLSKGTLDSASVYPREVSRRALALNAGALIFAHNHPSGVAEPSDADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L   +I V DH ++G    VSF
Sbjct: 188 RITQRLSDALGLFDIRVLDHFVVGDGEVVSF 218


>gi|262273497|ref|ZP_06051311.1| DNA repair protein RadC [Grimontia hollisae CIP 101886]
 gi|262222475|gb|EEY73786.1| DNA repair protein RadC [Grimontia hollisae CIP 101886]
          Length = 224

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N  IADE+   GTI+   VY RE+V+R LEL A ++IL HNHPSG   PS+AD 
Sbjct: 128 LYLDNQNRPIADEILFEGTINTAGVYPREVVKRSLELGANAVILAHNHPSGIAEPSNADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T  I   L  ++I + DH++IG    VSF
Sbjct: 188 HITHRIGDALALVDIRLLDHMVIGDGDVVSF 218


>gi|103487967|ref|YP_617528.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256]
 gi|98978044|gb|ABF54195.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256]
          Length = 354

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/84 (48%), Positives = 54/84 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    LIADE   +GTI HV +Y R I +R +EL A +IILVHNHPSG+P PS+AD+
Sbjct: 124 LFLDPARRLIADEQLQQGTIGHVAIYPRTIFRRAVELDAAAIILVHNHPSGDPTPSEADV 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
             T  +      L I + +HI++ 
Sbjct: 184 ATTARLAAIGRALEIQLLEHIVVA 207


>gi|227354791|ref|ZP_03839208.1| DNA repair protein [Proteus mirabilis ATCC 29906]
 gi|227165109|gb|EEI49940.1| DNA repair protein [Proteus mirabilis ATCC 29906]
          Length = 165

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I  E   +GT+D V V+ REI+++ ++ +A SIIL HNHPSG   PS AD 
Sbjct: 69  LFLDNQNQMIDCEEMFKGTVDRVEVHPREIIRQSIKKNAASIILAHNHPSGLSEPSLADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT+ I T    + I V DH+++G D  VSF
Sbjct: 129 QMTEKIFTACQLVGIKVLDHLVVGHDNCVSF 159


>gi|288933007|ref|YP_003437066.1| DNA repair protein RadC [Klebsiella variicola At-22]
 gi|290511800|ref|ZP_06551168.1| DNA repair protein RadC [Klebsiella sp. 1_1_55]
 gi|288887736|gb|ADC56054.1| DNA repair protein RadC [Klebsiella variicola At-22]
 gi|289775590|gb|EFD83590.1| DNA repair protein RadC [Klebsiella sp. 1_1_55]
          Length = 221

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++++A ++IL HNHPSG+P PS AD 
Sbjct: 125 IFLDNQNRVLKHSRLFSGTLSHVEVHPREIVREAIKVNAAAVILAHNHPSGSPEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++     + I V DH++IG+ A+VSF
Sbjct: 185 LITERVVKCCRFMEIRVLDHLVIGRGAYVSF 215


>gi|206579335|ref|YP_002236000.1| DNA repair protein RadC [Klebsiella pneumoniae 342]
 gi|238054489|sp|B5XTG5|Y116_KLEP3 RecName: Full=UPF0758 protein KPK_0116
 gi|206568393|gb|ACI10169.1| DNA repair protein RadC [Klebsiella pneumoniae 342]
          Length = 221

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++++A ++IL HNHPSG+P PS AD 
Sbjct: 125 IFLDNQNRVLKHSRLFSGTLSHVEVHPREIVREAIKVNAAAVILAHNHPSGSPEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++     + I V DH++IG+ A+VSF
Sbjct: 185 LITERVVKCCRFMEIRVLDHLVIGRGAYVSF 215


>gi|218708245|ref|YP_002415866.1| DNA repair protein RadC [Vibrio splendidus LGP32]
 gi|254789669|sp|B7VHK2|Y182_VIBSL RecName: Full=UPF0758 protein VS_0182
 gi|218321264|emb|CAV17214.1| DNA repair protein radC homolog [Vibrio splendidus LGP32]
          Length = 224

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I DEV   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQNRVIKDEVMFEGTIDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  ++I + DH ++G    +SF
Sbjct: 188 RITRRLTDALALVDIRILDHFVVGDGEVISF 218


>gi|16128232|ref|NP_414781.1| CP4-6 prophage; predicted DNA repair protein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89107120|ref|AP_000900.1| predicted DNA repair protein [Escherichia coli str. K-12 substr.
           W3110]
 gi|170079872|ref|YP_001729192.1| CP4-6 prophage; DNA repair protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|238899635|ref|YP_002925431.1| CP4-6 prophage; putative DNA repair protein [Escherichia coli
           BW2952]
 gi|3025218|sp|Q47685|YKFG_ECOLI RecName: Full=UPF0758 protein ykfG
 gi|1552815|gb|AAB08667.1| similar to E. coli ORF_o160, also similar to radC [Escherichia
           coli]
 gi|2367100|gb|AAC73350.1| CP4-6 prophage; predicted DNA repair protein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|4902982|dbj|BAA77916.1| predicted DNA repair protein [Escherichia coli str. K12 substr.
           W3110]
 gi|169887707|gb|ACB01414.1| CP4-6 prophage; predicted DNA repair protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|238860643|gb|ACR62641.1| CP4-6 prophage; predicted DNA repair protein [Escherichia coli
           BW2952]
 gi|260450557|gb|ACX40979.1| DNA repair protein RadC [Escherichia coli DH1]
 gi|315134932|dbj|BAJ42091.1| CP4-6 prophage; putative DNA repair protein [Escherichia coli DH1]
          Length = 158

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LIA E    GTI+   V+ RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 62  LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ ++  L  ++I V DH+I+G     SF
Sbjct: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152


>gi|13471076|ref|NP_102645.1| DNA repair protein RadC [Mesorhizobium loti MAFF303099]
 gi|14021820|dbj|BAB48431.1| DNA repair protein; RadC [Mesorhizobium loti MAFF303099]
          Length = 179

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 38/50 (76%), Positives = 43/50 (86%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHP+
Sbjct: 117 LFLDKKNALIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPT 166


>gi|330447140|ref|ZP_08310790.1| DNA repair RadC family protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491331|dbj|GAA05287.1| DNA repair RadC family protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 224

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTID   VY RE+V+R LEL+A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVINGETLFEGTIDCASVYPREVVKRSLELNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I  +L  ++I V DH +IG    VSF
Sbjct: 188 RITRKISDSLALVDIRVLDHFVIGDGEIVSF 218


>gi|27383284|ref|NP_774813.1| DNA repair protein [Bradyrhizobium japonicum USDA 110]
 gi|27356458|dbj|BAC53438.1| radC [Bradyrhizobium japonicum USDA 110]
          Length = 206

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 37/53 (69%), Positives = 45/53 (84%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53
           LFLDK N LIADEVQ  GT+DH PVY RE+++R LELSAT++ILVHNHP+ +P
Sbjct: 144 LFLDKRNQLIADEVQQTGTVDHTPVYPREVIKRALELSATALILVHNHPTTHP 196


>gi|325277161|ref|ZP_08142806.1| DNA repair protein RadC [Pseudomonas sp. TJI-51]
 gi|324097699|gb|EGB95900.1| DNA repair protein RadC [Pseudomonas sp. TJI-51]
          Length = 165

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +IA E   RGT+D   VY REIV+  LE +A +IILVHNHPSG+P PS AD 
Sbjct: 69  LMLDSRHRVIAFEEVFRGTLDGASVYPREIVKIALEHNAAAIILVHNHPSGDPEPSQADR 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           N+T  +   LN + +   DH+++G++  VS 
Sbjct: 129 NLTTKLQDALNLVGVRTLDHVVVGQEDCVSL 159


>gi|262039133|ref|ZP_06012461.1| DNA repair protein RadC [Leptotrichia goodfellowii F0264]
 gi|261746842|gb|EEY34353.1| DNA repair protein RadC [Leptotrichia goodfellowii F0264]
          Length = 224

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N LI +E   +GT+D   +Y+RE++++ L+ +A S+ILVHNHPSG+  PS +DI
Sbjct: 128 LFLNTQNELIREEELFQGTLDRSTIYVRELMKKVLKYNAKSVILVHNHPSGSLKPSQSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I + DHIII +  + SF
Sbjct: 188 ILTKKIKEIFENVEIRLLDHIIISEKGYFSF 218


>gi|281357981|ref|ZP_06244466.1| DNA repair protein RadC [Victivallis vadensis ATCC BAA-548]
 gi|281315639|gb|EFA99667.1| DNA repair protein RadC [Victivallis vadensis ATCC BAA-548]
          Length = 227

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N L+  +V   GT+D   VY RE++++ +   AT++IL HNHP+G   PS ADI
Sbjct: 132 LFLNAQNHLLCFDVIP-GTVDRATVYAREVLEKAINTKATAVILAHNHPTGICEPSPADI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L P+ I++HDHII+    + SF   R++
Sbjct: 191 KLTNTIRQVLQPVGILLHDHIIVAPSCYFSFASRRML 227


>gi|120609194|ref|YP_968872.1| DNA repair protein RadC [Acidovorax citrulli AAC00-1]
 gi|120587658|gb|ABM31098.1| DNA repair protein RadC [Acidovorax citrulli AAC00-1]
          Length = 167

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N  IA E   RGTI+   VY R IV+R ++L+A+S+ILVHNHPSG    SDAD 
Sbjct: 71  VFLDCQNRAIAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADR 130

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I  +L  +++ V DH+I+G     SF
Sbjct: 131 GLTERICASLGLIDVRVVDHVIVGSGTPYSF 161


>gi|152977701|ref|YP_001343330.1| DNA repair protein RadC [Actinobacillus succinogenes 130Z]
 gi|171472902|sp|A6VK98|Y013_ACTSZ RecName: Full=UPF0758 protein Asuc_0013
 gi|150839424|gb|ABR73395.1| DNA repair protein RadC [Actinobacillus succinogenes 130Z]
          Length = 220

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E   RGTI+   VY REI++  L  +A ++IL HNHPSG+  PS +D 
Sbjct: 124 LFLDNQHRLIKKEDMFRGTINAASVYPREIIKTALYCNAAALILAHNHPSGSAEPSASDK 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT+ I      + I V DH +IGK  + SF
Sbjct: 184 QMTKRIQAAAELMEIRVLDHFVIGKGCYFSF 214


>gi|312598047|gb|ADQ89981.1| DNA-repair protein [Proteus mirabilis]
          Length = 223

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I  E   +GT+D V V+ REI+++ ++ +A SIIL HNHPSG   PS AD 
Sbjct: 127 LFLDNQNQMIDCEEMFKGTVDRVEVHPREIIRQSIKKNAASIILAHNHPSGLSEPSLADK 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I T    + I V DH+++G D+ VSF
Sbjct: 187 QITEKIFTACQLVGIKVLDHLVVGHDSCVSF 217


>gi|312882919|ref|ZP_07742651.1| DNA repair protein RadC [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369438|gb|EFP96958.1| DNA repair protein RadC [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 224

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +++ E    GTID   VY RE+V+R LE++A +IIL HNHPSG   PS +D 
Sbjct: 128 IFLDSQHRVLSCESLFFGTIDCASVYPREVVKRSLEMNAAAIILAHNHPSGVAEPSQSDR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I+  +  ++I V DH ++G   FVSF
Sbjct: 188 RITRKIVDAMGLVDIRVLDHFVVGDGEFVSF 218


>gi|254490370|ref|ZP_05103559.1| DNA repair protein RadC [Methylophaga thiooxidans DMS010]
 gi|224464503|gb|EEF80763.1| DNA repair protein RadC [Methylophaga thiooxydans DMS010]
          Length = 224

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 61/94 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E   RGTID   VY RE+V++ L+ +A ++I  HNHPSG   PS ADI
Sbjct: 128 LFLDNQHRMIAFEELFRGTIDGASVYPREVVKQALQHNAAAVIFAHNHPSGVAEPSQADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ + + L  ++I V DHII+G D  +S   L
Sbjct: 188 HITRRLKSALELVDIRVLDHIIVGDDEPISMAQL 221


>gi|296104052|ref|YP_003614198.1| putative DNA repair protein [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295058511|gb|ADF63249.1| putative DNA repair protein [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 158

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LIA E    GTI+   V+ RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 62  LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ ++  L  ++I V DH+I+G     SF
Sbjct: 122 ALTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152


>gi|153802336|ref|ZP_01956922.1| DNA repair protein [Vibrio cholerae MZO-3]
 gi|124122109|gb|EAY40852.1| DNA repair protein [Vibrio cholerae MZO-3]
 gi|172051601|emb|CAQ34996.1| hypothetical protein [Photobacterium damselae subsp. piscicida]
 gi|259156591|gb|ACV96534.1| DNA repair protein RadC [Vibrio fluvialis Ind1]
          Length = 165

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GT+D   VY RE+ +R LEL+A ++ILVHNHPSG+P PS+AD 
Sbjct: 69  LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNAAAVILVHNHPSGDPEPSEADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L+ ++I   DH+++  +  VS 
Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSL 159


>gi|254850972|ref|ZP_05240322.1| DNA repair protein [Vibrio cholerae MO10]
 gi|21885298|gb|AAL59704.1| putative DNA repair radC [Vibrio cholerae]
 gi|254846677|gb|EET25091.1| DNA repair protein [Vibrio cholerae MO10]
 gi|259156323|gb|ACV96269.1| DNA repair protein RadC [Vibrio cholerae Ind4]
 gi|259156536|gb|ACV96480.1| DNA repair protein RadC [Vibrio cholerae Mex1]
          Length = 165

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GT+D   VY RE+ +R LEL+A ++ILVHNHPSG+P PS+AD 
Sbjct: 69  LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNAAAVILVHNHPSGDPEPSEADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L+ ++I   DH+++  +  VS 
Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSL 159


>gi|153822298|ref|ZP_01974965.1| DNA repair protein [Vibrio cholerae B33]
 gi|229509083|ref|ZP_04398570.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229608755|ref|YP_002879403.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|255743769|ref|ZP_05417727.1| DNA repair protein RadC [Vibrio cholera CIRS 101]
 gi|126520194|gb|EAZ77417.1| DNA repair protein [Vibrio cholerae B33]
 gi|229353840|gb|EEO18775.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229371410|gb|ACQ61833.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|255738630|gb|EET94017.1| DNA repair protein RadC [Vibrio cholera CIRS 101]
 gi|259156144|gb|ACV96092.1| DNA repair protein RadC [Providencia alcalifaciens Ban1]
 gi|259156276|gb|ACV96223.1| DNA repair protein RadC [Vibrio cholerae Ban5]
 gi|259156401|gb|ACV96346.1| DNA repair protein RadC [Vibrio cholerae Ind5]
          Length = 165

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GT+D   VY RE+ +R LEL+A ++ILVHNHPSG+P PS+AD 
Sbjct: 69  LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNAAAVILVHNHPSGDPEPSEADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L+ ++I   DH+++  +  VS 
Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSL 159


>gi|300916723|ref|ZP_07133437.1| putative DNA repair protein RadC [Escherichia coli MS 115-1]
 gi|300415989|gb|EFJ99299.1| putative DNA repair protein RadC [Escherichia coli MS 115-1]
          Length = 158

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LIA E    GTI+   V+ RE+V+R L  +A ++ILVHNHPSG   PS AD 
Sbjct: 62  LYLDNQNQLIAHETLFSGTINRTEVHPREVVKRALHFNAAAVILVHNHPSGETTPSQADK 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  ++I + DH+I+G     SF
Sbjct: 122 ALTQRLTQVLQLVDIRIPDHLIVGGRQIYSF 152


>gi|257463623|ref|ZP_05628014.1| DNA repair protein radC [Fusobacterium sp. D12]
 gi|317061175|ref|ZP_07925660.1| DNA repair protein radC [Fusobacterium sp. D12]
 gi|313686851|gb|EFS23686.1| DNA repair protein radC [Fusobacterium sp. D12]
          Length = 227

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N L+  E   RG+ID   VY REI+++ L+  A S+I  HNHPSG   PS  DI
Sbjct: 131 LFLNTANRLLCSEELFRGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGRTQPSRQDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L   ++++ +HII+ K ++ SF
Sbjct: 191 ELTREMKEALKLFDVLLLEHIIVSKHSYFSF 221


>gi|188992506|ref|YP_001904516.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167734266|emb|CAP52476.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris]
          Length = 159

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/92 (47%), Positives = 62/92 (67%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H+IL A+ + S GTID   ++ R + +R LEL+A ++IL HNHPSGNP PS+AD
Sbjct: 63  VFLDNQHHILAAEHLFS-GTIDGCEIHPRVVAKRALELNAAAVILFHNHPSGNPEPSEAD 121

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +TQ +   L  L+I V DH++IG    VS 
Sbjct: 122 RKVTQRLQEALGLLDIRVLDHLVIGGQKSVSL 153


>gi|311278018|ref|YP_003940249.1| DNA repair protein RadC [Enterobacter cloacae SCF1]
 gi|308747213|gb|ADO46965.1| DNA repair protein RadC [Enterobacter cloacae SCF1]
          Length = 160

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LIA E+   G+I    V+ RE+V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 64  LYLNQQNQLIAHEILFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ ++  L  ++I V DH+I+G    +SF
Sbjct: 124 TITQRLVQALQLIDIRVPDHLIVGGSQILSF 154


>gi|209517442|ref|ZP_03266283.1| DNA repair protein RadC [Burkholderia sp. H160]
 gi|209502096|gb|EEA02111.1| DNA repair protein RadC [Burkholderia sp. H160]
          Length = 283

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  +RG++  + VY REIV+R L  +A S+I+ HNHPSG   PS AD 
Sbjct: 180 LFLDARHRLIRCEESARGSLTRMAVYPREIVRRALAANAASLIVAHNHPSGAVEPSAADC 239

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++TQ +   L  +++ + DH++IG D+  SF
Sbjct: 240 HLTQTLRDALALVDVQLIDHLVIGADSVYSF 270


>gi|290477301|ref|YP_003470222.1| putative associated with replication fork, DNA repair protein
           [Xenorhabdus bovienii SS-2004]
 gi|289176655|emb|CBJ83464.1| putative associated with replication fork, DNA repair protein
           [Xenorhabdus bovienii SS-2004]
          Length = 230

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL   N +I  +   +GTI+ V V+ REIV++ ++++A SIIL HNHPSGNP PS AD 
Sbjct: 134 LFLTNQNKVICHDEMFKGTINKVEVHPREIVKQAVKVNAASIILAHNHPSGNPEPSLADK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II     + + V DHI+IGK   VSF
Sbjct: 194 LVTEKIIDACELVGVKVLDHIVIGKQHCVSF 224


>gi|193063615|ref|ZP_03044703.1| DNA repair protein RadC [Escherichia coli E22]
 gi|192930602|gb|EDV83208.1| DNA repair protein RadC [Escherichia coli E22]
          Length = 161

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    G+++HV V+ RE+V+  L  +A +++L HNHPSG+P PS  D 
Sbjct: 65  LYLDNQHRLLESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDR 124

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           N+T  +   L  +++   DH+++G+D  VSF
Sbjct: 125 NITGRLKEALELVDVKTLDHLVVGRDGIVSF 155


>gi|20095187|gb|AAM08053.1| hypothetical protein [Providencia rettgeri]
          Length = 165

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GT+D   VY RE+ +R LEL+A ++ILVHNHPSG+P PS+AD 
Sbjct: 69  LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNAAAVILVHNHPSGDPEPSEADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L+ ++I   DH+++  +  VS 
Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVAYEGCVSL 159


>gi|171769881|sp|A7MQ95|Y4094_ENTS8 RecName: Full=UPF0758 protein ESA_04094
          Length = 230

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I       GT+ HV V+ REIV+  + L+A  IIL HNHPSG   PS AD 
Sbjct: 134 IFLDSQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I+ +   ++I V DH++IG+  +VSF
Sbjct: 194 MVTERIVKSCQLVDIRVLDHLVIGRGEYVSF 224


>gi|156936195|ref|YP_001440111.1| hypothetical protein ESA_04094 [Cronobacter sakazakii ATCC BAA-894]
 gi|156534449|gb|ABU79275.1| hypothetical protein ESA_04094 [Cronobacter sakazakii ATCC BAA-894]
          Length = 255

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I       GT+ HV V+ REIV+  + L+A  IIL HNHPSG   PS AD 
Sbjct: 159 IFLDSQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADK 218

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I+ +   ++I V DH++IG+  +VSF
Sbjct: 219 MVTERIVKSCQLVDIRVLDHLVIGRGEYVSF 249


>gi|156972975|ref|YP_001443882.1| DNA repair protein RadC [Vibrio harveyi ATCC BAA-1116]
 gi|166218799|sp|A7MSP7|Y653_VIBHB RecName: Full=UPF0758 protein VIBHAR_00653
 gi|156524569|gb|ABU69655.1| hypothetical protein VIBHAR_00653 [Vibrio harveyi ATCC BAA-1116]
          Length = 224

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I  L  ++I + DH +IG    VSF
Sbjct: 188 RITRRLIDALGLVDIRILDHFVIGDGESVSF 218


>gi|17547339|ref|NP_520741.1| hypothetical protein RSc2620 [Ralstonia solanacearum GMI1000]
 gi|17429642|emb|CAD16327.1| probable dna repair radc-like protein [Ralstonia solanacearum
           GMI1000]
          Length = 169

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D  + LI      RGTID   VY RE+V+  L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 73  LFMDTQHRLIEYAEMFRGTIDGASVYPRELVKEALRLNAAAVIVSHNHPSGNPEPSGADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  +++ V DH+I+      SF  +GL
Sbjct: 133 ALTQRLKEALGLVDVRVLDHVIVAGTDTTSFAERGL 168


>gi|315651397|ref|ZP_07904422.1| DNA repair protein RadC [Eubacterium saburreum DSM 3986]
 gi|315486356|gb|EFU76713.1| DNA repair protein RadC [Eubacterium saburreum DSM 3986]
          Length = 236

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 65/97 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD     I+D V S GT++   V +REI+   L+  A ++IL+HNHPSG+P+PS ADI
Sbjct: 140 VFLDTRQRPISDMVISVGTVNSSLVSVREILIESLKHLAVNVILLHNHPSGDPSPSKADI 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+NI   LN + I + DHI+IG + + SFK   II
Sbjct: 200 DITKNINNALNSIGIELIDHIVIGDNCYYSFKEQGII 236


>gi|327480970|gb|AEA84280.1| RadC family DNA repair protein [Pseudomonas stutzeri DSM 4166]
          Length = 168

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A ++I  HNHPSGNP PS AD 
Sbjct: 72  LFLDAKHRLIQYVEMFRGTIDSASVYPREVVKEALRLNAAAVIFAHNHPSGNPEPSQADK 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  +++   DH+I+     VSF  +GL
Sbjct: 132 VLTQRLKEALALVDVRSLDHVIVAGQRTVSFAERGL 167


>gi|237736936|ref|ZP_04567417.1| DNA repair protein radC [Fusobacterium mortiferum ATCC 9817]
 gi|229420798|gb|EEO35845.1| DNA repair protein radC [Fusobacterium mortiferum ATCC 9817]
          Length = 225

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  NIL+  E    GTID   VY REI+++ ++  A  +I  HNHPSGN  PS  DI
Sbjct: 129 IFLNNFNILVGSETLFVGTIDKSAVYPREILEKVIQYKAKGVIFAHNHPSGNLRPSKQDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+++   L  +++ + +HIII KD + SF
Sbjct: 189 QITEHMQEVLEMIDVKLLEHIIITKDGYFSF 219


>gi|218888170|ref|YP_002437491.1| DNA repair protein RadC [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218759124|gb|ACL10023.1| DNA repair protein RadC [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 225

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD  N L+A E  SRGT++   VY REI++  L   A SIILVHNHP GNP+PS  DI 
Sbjct: 130 LLDTQNRLVAWERASRGTVNASVVYPREILELALRHKAASIILVHNHPGGNPSPSAGDIE 189

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +T+ +  +   + + + DH+I+  DA  S K
Sbjct: 190 ITRQLELSAKAIGMRLLDHVIVTDDACYSLK 220


>gi|134093935|ref|YP_001099010.1| putative DNA repair protein; putative CP4-6 prophage [Herminiimonas
           arsenicoxydans]
 gi|133737838|emb|CAL60883.1| putative DNA repair protein RadC [Herminiimonas arsenicoxydans]
          Length = 175

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  N +IA E    GTI    VY R IVQR + L+A S+IL HNHPSG+  PSDAD 
Sbjct: 78  VFMDTQNRVIAYEPLFFGTIHQTSVYPRVIVQRAMSLNAASMILAHNHPSGSTQPSDADK 137

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  + + L  +++ V DH IIG++   SF
Sbjct: 138 QLTNRLKSLLESIDVRVLDHFIIGEEGTFSF 168


>gi|283852530|ref|ZP_06369798.1| DNA repair protein RadC [Desulfovibrio sp. FW1012B]
 gi|283572138|gb|EFC20130.1| DNA repair protein RadC [Desulfovibrio sp. FW1012B]
          Length = 228

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 57/91 (62%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            +D  N LI  E  S+GTID   VY RE++   L  +A+ +ILVHNHPSG+P PS  DI+
Sbjct: 133 LVDTKNRLIGWEQVSKGTIDQAAVYPREVLGVALRHNASGMILVHNHPSGDPRPSVQDID 192

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            T+ I T    +++ V DH+++  D F SF+
Sbjct: 193 FTRRIRTAAREIDLRVLDHLVVTDDRFFSFQ 223


>gi|222112697|ref|YP_002554961.1| DNA repair protein Radc [Acidovorax ebreus TPSY]
 gi|221732141|gb|ACM34961.1| DNA repair protein RadC [Acidovorax ebreus TPSY]
          Length = 169

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 73  LFLDSQHRLIEYTEMFRGTIDSASVYPRELVKEALRLNAAAVIVSHNHPSGNPEPSAADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +  +L  +++   DHI++   +  SF  +GL
Sbjct: 133 ALTQRLKESLALVDVRTLDHIVVTGSSTTSFAERGL 168


>gi|224540956|ref|ZP_03681495.1| hypothetical protein CATMIT_00107 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526107|gb|EEF95212.1| hypothetical protein CATMIT_00107 [Catenibacterium mitsuokai DSM
           15897]
          Length = 226

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 61/96 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD HN LIA++    G+++   V  REI +  L  +  SII VHNHPSG+ +PS  DI
Sbjct: 126 MILDNHNRLIAEKTLFIGSVNMSIVSAREIFREALAFNGVSIICVHNHPSGDAHPSSEDI 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           +MTQ ++     +N+ + DHIIIG++ + SFK  ++
Sbjct: 186 SMTQKLVDLGKMMNVDIVDHIIIGRNQYYSFKAEKV 221


>gi|187939929|gb|ACD39066.1| RadC family DNA repair protein [Pseudomonas aeruginosa]
          Length = 169

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 73  LFLDTQHRLIEYSELFRGTIDSASVYPRELVKEALRLNAAAVIVSHNHPSGNPEPSGADK 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  +++   DHII+   + +SF  +GL
Sbjct: 133 VLTQRLREALALVDVRTLDHIIVAGGSTISFAERGL 168


>gi|229529171|ref|ZP_04418561.1| DNA repair protein RadC [Vibrio cholerae 12129(1)]
 gi|229530051|ref|ZP_04419441.1| DNA repair protein RadC [Vibrio cholerae 12129(1)]
 gi|254285246|ref|ZP_04960211.1| DNA repair protein RadC, putative [Vibrio cholerae AM-19226]
 gi|258620000|ref|ZP_05715040.1| RadC-like protein [Vibrio mimicus VM573]
 gi|150424518|gb|EDN16454.1| DNA repair protein RadC, putative [Vibrio cholerae AM-19226]
 gi|229332945|gb|EEN98431.1| DNA repair protein RadC [Vibrio cholerae 12129(1)]
 gi|229333825|gb|EEN99311.1| DNA repair protein RadC [Vibrio cholerae 12129(1)]
 gi|258587733|gb|EEW12442.1| RadC-like protein [Vibrio mimicus VM573]
          Length = 158

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ ++I V DH+++GK + VSF
Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSF 152


>gi|260847121|ref|YP_003224899.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
 gi|257762268|dbj|BAI33765.1| predicted DNA repair protein [Escherichia coli O103:H2 str. 12009]
          Length = 180

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    G+++HV V+ RE+V+  L  +A +++L HNHPSG+P PS  D 
Sbjct: 84  LYLDNQHRLLESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDR 143

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           N+T  +   L  +++   DH+++G+D  VSF
Sbjct: 144 NITGRLKEALELVDVKTLDHLVVGRDGIVSF 174


>gi|311281126|ref|YP_003943357.1| DNA repair protein RadC [Enterobacter cloacae SCF1]
 gi|308750321|gb|ADO50073.1| DNA repair protein RadC [Enterobacter cloacae SCF1]
          Length = 160

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LIA E    G+I    V+ RE+V+R L  +A ++IL HNHPSG+ +PS AD 
Sbjct: 64  LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALHFNAAAVILAHNHPSGDTSPSQADK 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ ++  L  ++I V DH+I+G    +SF
Sbjct: 124 TITQRLVQALQLVDIRVPDHLIVGGTQILSF 154


>gi|260599935|ref|YP_003212506.1| DNA repair protein radC [Cronobacter turicensis z3032]
 gi|260219112|emb|CBA34467.1| DNA repair protein radC homolog [Cronobacter turicensis z3032]
          Length = 220

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I       GT+ HV V+ REIV+  + L+A +IIL HNHPSG+  PS AD 
Sbjct: 124 IFLDSQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAAIILAHNHPSGHAEPSRADK 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I+     ++I V DH++IG+  +VSF
Sbjct: 184 MVTERIVKCCQLVDIRVLDHLVIGRGEYVSF 214


>gi|188025517|ref|ZP_02997537.1| hypothetical protein PROSTU_00686 [Providencia stuartii ATCC 25827]
 gi|188025584|ref|ZP_02997572.1| hypothetical protein PROSTU_00936 [Providencia stuartii ATCC 25827]
 gi|282600132|ref|ZP_05973133.2| DNA repair protein RadC [Providencia rustigianii DSM 4541]
 gi|188022915|gb|EDU60955.1| hypothetical protein PROSTU_00936 [Providencia stuartii ATCC 25827]
 gi|188023263|gb|EDU61303.1| hypothetical protein PROSTU_00686 [Providencia stuartii ATCC 25827]
 gi|282566538|gb|EFB72073.1| DNA repair protein RadC [Providencia rustigianii DSM 4541]
          Length = 166

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LI+ E    G+I    VY RE+V+R L  +A ++I  HNHPSG+  PS AD 
Sbjct: 70  LYLNQQNQLISSETLFAGSISSTQVYPREVVKRALHFNAAAVIFAHNHPSGDITPSQADK 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++TQ +I  L  + + V DH+IIG     SF
Sbjct: 130 SITQQLIKALQLIEVRVLDHLIIGGQQIFSF 160


>gi|262402819|ref|ZP_06079380.1| DNA repair protein RadC [Vibrio sp. RC586]
 gi|262351601|gb|EEZ00734.1| DNA repair protein RadC [Vibrio sp. RC586]
          Length = 158

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ ++I V DH+++GK + VSF
Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSF 152


>gi|330503754|ref|YP_004380623.1| DNA repair protein RadC [Pseudomonas mendocina NK-01]
 gi|328918040|gb|AEB58871.1| DNA repair protein RadC [Pseudomonas mendocina NK-01]
          Length = 168

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A ++   HNHPSGNP PS AD 
Sbjct: 72  LFLDAKHRLIQYVEMFRGTIDSASVYPREVVKEALRLNAAAVFFAHNHPSGNPEPSQADK 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++   DHII+     VSF  L ++
Sbjct: 132 VLTQRLKEALALVDVRSLDHIIVAGQRTVSFAELGLL 168


>gi|33151902|ref|NP_873255.1| DNA repair protein RadC [Haemophilus ducreyi 35000HP]
 gi|38372438|sp|Q7VN51|Y732_HAEDU RecName: Full=UPF0758 protein HD_0732
 gi|33148123|gb|AAP95644.1| DNA repair protein [Haemophilus ducreyi 35000HP]
          Length = 223

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  E    GTI+   V+ REI++  L+ +A +II+ HNHPSGN   S AD 
Sbjct: 124 LFLDNQNRLIKKEKMFYGTINQATVHPREIIKEALKCNAAAIIVAHNHPSGNCTASQADR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +TQ I    + + +   DHII+GK ++ SF+  R 
Sbjct: 184 QLTQKIKAACHLVEVRFVDHIIVGKGSYFSFEEERF 219


>gi|15641789|ref|NP_231421.1| DNA repair protein RadC, putative [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121585864|ref|ZP_01675658.1| DNA repair protein RadC, putative [Vibrio cholerae 2740-80]
 gi|147674352|ref|YP_001217326.1| putative DNA repair protein RadC [Vibrio cholerae O395]
 gi|153817804|ref|ZP_01970471.1| DNA repair protein RadC, putative [Vibrio cholerae NCTC 8457]
 gi|153821150|ref|ZP_01973817.1| DNA repair protein RadC, putative [Vibrio cholerae B33]
 gi|153828539|ref|ZP_01981206.1| putative DNA repair protein RadC [Vibrio cholerae 623-39]
 gi|227081931|ref|YP_002810482.1| putative DNA repair protein RadC [Vibrio cholerae M66-2]
 gi|229508112|ref|ZP_04397617.1| DNA repair protein RadC [Vibrio cholerae BX 330286]
 gi|229511649|ref|ZP_04401128.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229518788|ref|ZP_04408231.1| DNA repair protein RadC [Vibrio cholerae RC9]
 gi|229607673|ref|YP_002878321.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|255744800|ref|ZP_05418750.1| DNA repair protein RadC [Vibrio cholera CIRS 101]
 gi|262161917|ref|ZP_06030935.1| DNA repair protein RadC [Vibrio cholerae INDRE 91/1]
 gi|262169785|ref|ZP_06037476.1| DNA repair protein RadC [Vibrio cholerae RC27]
 gi|13432022|sp|Q9KR57|Y1786_VIBCH RecName: Full=UPF0758 protein VC_1786
 gi|9656311|gb|AAF94935.1| DNA repair protein RadC, putative [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121550002|gb|EAX60020.1| DNA repair protein RadC, putative [Vibrio cholerae 2740-80]
 gi|126511624|gb|EAZ74218.1| DNA repair protein RadC, putative [Vibrio cholerae NCTC 8457]
 gi|126521346|gb|EAZ78569.1| DNA repair protein RadC, putative [Vibrio cholerae B33]
 gi|146316235|gb|ABQ20774.1| putative DNA repair protein RadC [Vibrio cholerae O395]
 gi|148875934|gb|EDL74069.1| putative DNA repair protein RadC [Vibrio cholerae 623-39]
 gi|227009819|gb|ACP06031.1| putative DNA repair protein RadC [Vibrio cholerae M66-2]
 gi|227013686|gb|ACP09896.1| putative DNA repair protein RadC [Vibrio cholerae O395]
 gi|229343477|gb|EEO08452.1| DNA repair protein RadC [Vibrio cholerae RC9]
 gi|229351614|gb|EEO16555.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229355617|gb|EEO20538.1| DNA repair protein RadC [Vibrio cholerae BX 330286]
 gi|229370328|gb|ACQ60751.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|255737271|gb|EET92666.1| DNA repair protein RadC [Vibrio cholera CIRS 101]
 gi|262022019|gb|EEY40729.1| DNA repair protein RadC [Vibrio cholerae RC27]
 gi|262028649|gb|EEY47304.1| DNA repair protein RadC [Vibrio cholerae INDRE 91/1]
          Length = 158

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ ++I V DH+++GK + VSF
Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSF 152


>gi|23010157|ref|ZP_00050945.1| COG2003: DNA repair proteins [Magnetospirillum magnetotacticum
           MS-1]
          Length = 208

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/50 (70%), Positives = 42/50 (84%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLD+ N LIADEVQ RGT+DH PVY RE+ +R LELS+T+IIL HNHP+
Sbjct: 149 LFLDRRNHLIADEVQGRGTVDHTPVYTREVARRALELSSTAIILAHNHPT 198


>gi|304559927|gb|ADM42591.1| DNA repair protein RadC family protein [Edwardsiella tarda FL6-60]
          Length = 161

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    G+++HV V+ RE+V+  L  +A +++L HNHPSG+P PS AD 
Sbjct: 65  LYLDNLHCLLESETLFAGSVNHVQVHPREVVKSALRFNAAAVVLAHNHPSGDPEPSKADR 124

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I   L  +++   DH+++G+D  VSF
Sbjct: 125 QLTDRIKEVLGLVDVKTLDHLVVGQDGIVSF 155


>gi|153214270|ref|ZP_01949287.1| DNA repair protein RadC, putative [Vibrio cholerae 1587]
 gi|124115418|gb|EAY34238.1| DNA repair protein RadC, putative [Vibrio cholerae 1587]
          Length = 158

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ ++I V DH+++GK + VSF
Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSF 152


>gi|297581219|ref|ZP_06943143.1| DNA repair protein [Vibrio cholerae RC385]
 gi|297534535|gb|EFH73372.1| DNA repair protein [Vibrio cholerae RC385]
          Length = 169

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 74  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 133

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ ++I V DH+++GK + VSF
Sbjct: 134 RITQRLKDALSLVDIRVLDHVVVGKSS-VSF 163


>gi|121727688|ref|ZP_01680783.1| DNA repair protein RadC, putative [Vibrio cholerae V52]
 gi|298498145|ref|ZP_07007952.1| DNA repair protein [Vibrio cholerae MAK 757]
 gi|121629985|gb|EAX62393.1| DNA repair protein RadC, putative [Vibrio cholerae V52]
 gi|297542478|gb|EFH78528.1| DNA repair protein [Vibrio cholerae MAK 757]
          Length = 169

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 74  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 133

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ ++I V DH+++GK + VSF
Sbjct: 134 RITQRLKDALSLVDIRVLDHVVVGKSS-VSF 163


>gi|269959366|ref|ZP_06173749.1| DNA repair protein RadC [Vibrio harveyi 1DA3]
 gi|269835803|gb|EEZ89879.1| DNA repair protein RadC [Vibrio harveyi 1DA3]
          Length = 224

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I  L  ++I + DH +IG    VSF
Sbjct: 188 RITRRLIDALALVDIRILDHFVIGDGESVSF 218


>gi|260902399|ref|ZP_05910794.1| DNA repair protein RadC [Vibrio parahaemolyticus AQ4037]
 gi|308110861|gb|EFO48401.1| DNA repair protein RadC [Vibrio parahaemolyticus AQ4037]
          Length = 224

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I  L  ++I + DH +IG    VSF
Sbjct: 188 RITRRLIDALALVDIRILDHFVIGDGESVSF 218


>gi|28896958|ref|NP_796563.1| DNA repair protein RadC [Vibrio parahaemolyticus RIMD 2210633]
 gi|260877858|ref|ZP_05890213.1| DNA repair protein RadC [Vibrio parahaemolyticus AN-5034]
 gi|260898016|ref|ZP_05906512.1| DNA repair protein RadC [Vibrio parahaemolyticus Peru-466]
 gi|31076907|sp|Q87T86|Y184_VIBPA RecName: Full=UPF0758 protein VP0184
 gi|28805166|dbj|BAC58447.1| DNA repair protein RadC [Vibrio parahaemolyticus RIMD 2210633]
 gi|308089340|gb|EFO39035.1| DNA repair protein RadC [Vibrio parahaemolyticus Peru-466]
 gi|308089972|gb|EFO39667.1| DNA repair protein RadC [Vibrio parahaemolyticus AN-5034]
 gi|328471754|gb|EGF42631.1| hypothetical protein VP10329_01325 [Vibrio parahaemolyticus 10329]
          Length = 224

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I  L  ++I + DH +IG    VSF
Sbjct: 188 RITRRLIDALALVDIRILDHFVIGDGESVSF 218


>gi|254427947|ref|ZP_05041654.1| DNA repair protein RadC [Alcanivorax sp. DG881]
 gi|196194116|gb|EDX89075.1| DNA repair protein RadC [Alcanivorax sp. DG881]
          Length = 224

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GTID   VY RE+V+R +E +A ++IL HNHPSG   PS +D 
Sbjct: 128 LFLDNKHRLIAFEKLFQGTIDAAAVYPREVVRRAMEHNAAAVILAHNHPSGVAEPSQSDH 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  + + V DH++IG   +VS 
Sbjct: 188 AITRRLVEALGLVEVRVLDHLVIGDGGWVSL 218


>gi|194469241|ref|ZP_03075225.1| DNA repair protein, RadC family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205358755|ref|ZP_02658774.2| DNA repair protein, RadC family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194455605|gb|EDX44444.1| DNA repair protein, RadC family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205332230|gb|EDZ18994.1| DNA repair protein, RadC family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 160

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LIA E    G+I    V+ RE+V+R L  +A ++IL HNHPSG+ +PS AD 
Sbjct: 64  LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTSPSQADK 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ ++  L  ++I V DH+I+G    +SF
Sbjct: 124 TITQRLVQALQLVDIRVPDHLIVGGTQILSF 154


>gi|152979886|ref|YP_001354241.1| DNA repair protein RadC [Janthinobacterium sp. Marseille]
 gi|166218783|sp|A6T144|Y2551_JANMA RecName: Full=UPF0758 protein mma_2551
 gi|151279963|gb|ABR88373.1| DNA repair protein [Janthinobacterium sp. Marseille]
          Length = 224

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGT+ H  VY REIV+  L  +A S+IL HNHPSG+  PS AD 
Sbjct: 128 LFLDVKNRLIACEELFRGTLTHTSVYPREIVKEALTHNAASVILAHNHPSGSSEPSAADH 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++TQ +   L  +++ V DH ++G     SF
Sbjct: 188 SLTQALKQALALIDVRVLDHFVVGGKNVYSF 218


>gi|148258571|ref|YP_001243156.1| DNA repair protein RadC [Bradyrhizobium sp. BTAi1]
 gi|146410744|gb|ABQ39250.1| DNA repair protein RadC [Bradyrhizobium sp. BTAi1]
          Length = 203

 Score = 82.0 bits (201), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/50 (74%), Positives = 43/50 (86%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLDK N LIADEVQ  GT+DH PVY RE+++R LELSAT+IILVHNHP+
Sbjct: 141 LFLDKRNQLIADEVQQTGTVDHTPVYPREVIKRALELSATAIILVHNHPT 190


>gi|229515195|ref|ZP_04404655.1| DNA repair protein RadC [Vibrio cholerae TMA 21]
 gi|229347900|gb|EEO12859.1| DNA repair protein RadC [Vibrio cholerae TMA 21]
          Length = 158

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFTHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ ++I V DH+++GK + VSF
Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSF 152


>gi|209886704|ref|YP_002290561.1| DNA repair protein RadC [Oligotropha carboxidovorans OM5]
 gi|209874900|gb|ACI94696.1| DNA repair protein RadC [Oligotropha carboxidovorans OM5]
          Length = 205

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/52 (71%), Positives = 44/52 (84%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52
           LFLDK N LIADE+Q  GT+DH PVY RE+V+R LELSAT+IILVHNHP+ +
Sbjct: 143 LFLDKRNQLIADELQQVGTVDHTPVYPREVVKRALELSATAIILVHNHPTSS 194


>gi|229520275|ref|ZP_04409701.1| DNA repair protein RadC [Vibrio cholerae TM 11079-80]
 gi|229342641|gb|EEO07633.1| DNA repair protein RadC [Vibrio cholerae TM 11079-80]
          Length = 158

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ ++I V DH+++GK + VSF
Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSF 152


>gi|163803269|ref|ZP_02197148.1| DNA repair protein RadC [Vibrio sp. AND4]
 gi|159172906|gb|EDP57744.1| DNA repair protein RadC [Vibrio sp. AND4]
          Length = 224

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I  L  ++I + DH +IG    VSF
Sbjct: 188 RITRRLIDALALVDIRILDHFVIGDGESVSF 218


>gi|323495229|ref|ZP_08100311.1| hypothetical protein VIBR0546_16286 [Vibrio brasiliensis LMG 20546]
 gi|323310489|gb|EGA63671.1| hypothetical protein VIBR0546_16286 [Vibrio brasiliensis LMG 20546]
          Length = 222

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GTID   VY RE+V+R LE +A ++IL HNHPSG   PS +D 
Sbjct: 126 LFLDNQHRVICGEPLFQGTIDAASVYPREVVKRALEHNAAALILAHNHPSGIAEPSQSDR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II  L+ ++I V DH ++G    VSF
Sbjct: 186 RITRRIIDALDLVDIRVLDHFVVGDGEIVSF 216


>gi|197286286|ref|YP_002152158.1| plasmid-related DNA repair protein [Proteus mirabilis HI4320]
 gi|194683773|emb|CAR44822.1| putative plasmid-related DNA repair protein [Proteus mirabilis
           HI4320]
          Length = 165

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GT+D   VY RE+ +R LE +A ++ILVHNHPSG+P PS+AD 
Sbjct: 69  LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALEFNAAAVILVHNHPSGDPEPSEADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L+ ++I   DH+++  +  VS 
Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSL 159


>gi|52549653|gb|AAU83502.1| DNA repair proteins [uncultured archaeon GZfos29E12]
          Length = 403

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/92 (44%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  ++ S GT+D+  V+ RE+ +  ++ SA  +ILVHNHPSG+P PS+ D+
Sbjct: 308 LLLDSKNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVILVHNHPSGDPEPSENDV 367

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +TQ I    N LNI V DH+II +  + + K
Sbjct: 368 EITQKIAKAGNILNIKVLDHVIIAEKGWDNIK 399


>gi|167832541|gb|ACA01849.1| DNA repair protein RadC [Vibrio cholerae]
          Length = 169

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 74  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 133

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ ++I V DH+++GK + VSF
Sbjct: 134 RITQRLKDALSLVDIRVLDHVVVGKSS-VSF 163


>gi|197286970|ref|YP_002152842.1| DNA repair protein [Proteus mirabilis HI4320]
 gi|194684457|emb|CAR46202.1| DNA repair protein [Proteus mirabilis HI4320]
 gi|301072223|gb|ADK56077.1| RadC [Proteus mirabilis]
 gi|301072245|gb|ADK56098.1| RadC [Proteus mirabilis]
 gi|312598063|gb|ADQ89996.1| DNA-repair protein [Proteus mirabilis]
          Length = 223

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I  E   +GT+D V V+ REI+++ ++ +A SIIL HNHPSG   PS AD 
Sbjct: 127 LFLDNQNQMIDCEEMFKGTVDRVEVHPREIIRQSIKKNAASIILAHNHPSGLSEPSLADK 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I T    + I V DH+++G D  VSF
Sbjct: 187 QITEKIFTACQLVGIKVLDHLVVGHDNCVSF 217


>gi|170684134|ref|YP_001742412.1| RadC family DNA repair protein [Escherichia coli SMS-3-5]
 gi|170521852|gb|ACB20030.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5]
          Length = 159

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LIA E    G+I    V+ RE+V+R L  +A ++IL HNHPSG+ +PS AD 
Sbjct: 63  LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTSPSKADK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ ++  L  ++I V DH+I+G    +SF
Sbjct: 123 TITQRLVQALQLVDIRVPDHLIVGGTQILSF 153


>gi|301631360|ref|XP_002944759.1| PREDICTED: UPF0758 protein Veis_1654-like [Xenopus (Silurana)
           tropicalis]
          Length = 225

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+VQR L   AT+++L HNHPSG+  PS AD 
Sbjct: 129 LFLDSQNRLLAMEELFRGTLTQTSVYPREVVQRALHHQATAVVLAHNHPSGSVQPSRADE 188

Query: 61  NMTQNIITTLNPLNIIVHDHIII--GKDAFVSFKGL 94
            +TQ +   L  +++ V DH+I+  G+   ++ +GL
Sbjct: 189 ALTQTLKAALALIDVRVLDHVIVAPGQALSMAEQGL 224


>gi|264679954|ref|YP_003279863.1| DNA repair protein RadC [Comamonas testosteroni CNB-2]
 gi|262210469|gb|ACY34567.1| DNA repair protein RadC [Comamonas testosteroni CNB-2]
          Length = 230

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V R L   A ++IL HNHPSGN  PS AD 
Sbjct: 134 LFLDSQNRLLALEEMFRGTLTQTSVYPREVVLRALHHQAGAVILAHNHPSGNVQPSSADS 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  +++ V DHII+G  A  S 
Sbjct: 194 ALTATLKAALALIDVRVLDHIIVGPGAACSM 224


>gi|110833075|ref|YP_691934.1| DNA repair protein RadC-like protein [Alcanivorax borkumensis SK2]
 gi|123050781|sp|Q0VT58|Y214_ALCBS RecName: Full=UPF0758 protein ABO_0214
 gi|110646186|emb|CAL15662.1| DNA repair protein RadC homolog [Alcanivorax borkumensis SK2]
          Length = 224

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GTID   VY RE+V+R +E +A ++IL HNHPSG   PS +D 
Sbjct: 128 LFLDNKHRLIAFEKLFQGTIDAAAVYPREVVRRAMEHNAAAVILAHNHPSGVAEPSQSDH 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  + + V DH++IG   +VS 
Sbjct: 188 AITRRLVEALGLVEVRVLDHLVIGDGGWVSL 218


>gi|296136107|ref|YP_003643349.1| DNA repair protein RadC [Thiomonas intermedia K12]
 gi|295796229|gb|ADG31019.1| DNA repair protein RadC [Thiomonas intermedia K12]
          Length = 226

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E  SRGT+    VY RE+V+  L L+A ++IL HNHPSG   PS AD 
Sbjct: 130 LFLDNQHQLIASEELSRGTLASTSVYPREVVKAALRLNAGALILAHNHPSGLAEPSAADR 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  +++ V DH+++ +   VSF  +GL
Sbjct: 190 ALTQTLKAALALVDVRVLDHLVVTRHNVVSFAERGL 225


>gi|254784439|ref|YP_003071867.1| DNA repair protein RadC [Teredinibacter turnerae T7901]
 gi|259551909|sp|C5BLG5|Y184_TERTT RecName: Full=UPF0758 protein TERTU_0184
 gi|237685002|gb|ACR12266.1| DNA repair protein RadC [Teredinibacter turnerae T7901]
          Length = 224

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L++ ++   GTID   VY RE+V++CL  +A ++I  HNHPSG   PS+AD 
Sbjct: 128 LFLDSQHRLLSFDILFNGTIDGAAVYPREVVKKCLAHNAAAVIFAHNHPSGVAEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  L+I   DHI++G+   VSF
Sbjct: 188 QITDRLCRALQLLDIRTLDHIVVGEGDAVSF 218


>gi|254361402|ref|ZP_04977543.1| DNA repair protein RadC [Mannheimia haemolytica PHL213]
 gi|153092908|gb|EDN73939.1| DNA repair protein RadC [Mannheimia haemolytica PHL213]
          Length = 241

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 62/96 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  E    GTI+   V+ REI++R L+ +A +II+ HNHPSG+  PS++D 
Sbjct: 132 LFLDNQNRLIYKEKMFFGTINQTAVHPREIIKRALKYNAAAIIVAHNHPSGSCLPSESDR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ I      ++I   DHII+GK+ + SF+  ++
Sbjct: 192 SLTKKIEMACELVDIRFVDHIIVGKEKYFSFEEEKL 227


>gi|312795310|ref|YP_004028232.1| DNA repair protein radC [Burkholderia rhizoxinica HKI 454]
 gi|312167085|emb|CBW74088.1| DNA repair protein radC [Burkholderia rhizoxinica HKI 454]
          Length = 239

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    +I  E  SRG++ H  VY RE+V+R LE +A ++I+ HNHPSG   PS AD+
Sbjct: 143 LFLDTRLRMIHAEELSRGSLSHAAVYPREVVRRALETNAAALIIAHNHPSGAAQPSAADL 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           +MT+ +   L  ++I + DH I+  D  +S 
Sbjct: 203 SMTRTLKNALCLMDIKLLDHFIVTSDTILSL 233


>gi|323702262|ref|ZP_08113928.1| DNA repair protein RadC [Desulfotomaculum nigrificans DSM 574]
 gi|323532752|gb|EGB22625.1| DNA repair protein RadC [Desulfotomaculum nigrificans DSM 574]
          Length = 241

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA EV S GT++   V+ RE+ +R +  SA SIILVHNHPSG+P PS  DI
Sbjct: 145 VLLNIKNQVIAKEVVSIGTLNSSMVHPRELFKRAIRRSAASIILVHNHPSGDPTPSQEDI 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + + + DHI+IG + FVS K   +I
Sbjct: 205 TITKRLMEAGEIIGVQILDHIVIGFEQFVSLKAKGLI 241


>gi|308271126|emb|CBX27735.1| DNA repair protein radC homolog [uncultured Desulfobacterium sp.]
          Length = 243

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I  E   +G++    VY RE+ +  L+  A ++I  HNHPSG+P PS  DI
Sbjct: 133 IFLDAKNKVIRTETLFKGSLTSSSVYPREVAKAALDYHAAALIFAHNHPSGDPAPSPEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I     + +IVH+HIIIG + + SF
Sbjct: 193 AVTRQLIFACKVMGVIVHEHIIIGDNKYFSF 223


>gi|187929782|ref|YP_001900269.1| DNA repair protein RadC [Ralstonia pickettii 12J]
 gi|238691809|sp|B2UAP0|Y2712_RALPJ RecName: Full=UPF0758 protein Rpic_2712
 gi|187726672|gb|ACD27837.1| DNA repair protein RadC [Ralstonia pickettii 12J]
          Length = 224

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            FLD  + LIA E   RGT+    VY REI +R L  +A ++IL HNHP+GN  PS++D+
Sbjct: 128 FFLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  L++IV DH+I+G++    F
Sbjct: 188 ILTRELCRALAMLDVIVLDHMIVGRNHVYGF 218


>gi|307258076|ref|ZP_07539828.1| hypothetical protein appser10_20560 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306863439|gb|EFM95370.1| hypothetical protein appser10_20560 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 223

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI  E    GTI+   VY REI++  L+ +A +II+ HNHPSGN  PS++D 
Sbjct: 124 MFLDNQNRLIKKEKMFYGTINQATVYPREIIKEALKCNAAAIIVAHNHPSGNCTPSESDR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    + + I   DHI++GK  + SF+
Sbjct: 184 ALTKKLEMACDLVGIRFVDHIVVGKGDYFSFE 215


>gi|53729025|ref|ZP_00134298.2| COG2003: DNA repair proteins [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126209424|ref|YP_001054649.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae L20]
 gi|165977413|ref|YP_001653006.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|190151327|ref|YP_001969852.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|303250352|ref|ZP_07336551.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303251745|ref|ZP_07337916.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307246909|ref|ZP_07528974.1| hypothetical protein appser1_20990 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307249045|ref|ZP_07531053.1| hypothetical protein appser2_20080 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307251244|ref|ZP_07533165.1| hypothetical protein appser4_20050 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307253661|ref|ZP_07535528.1| hypothetical protein appser6_21530 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307255891|ref|ZP_07537692.1| hypothetical protein appser9_21120 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307260344|ref|ZP_07542051.1| hypothetical protein appser11_21250 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307262474|ref|ZP_07544119.1| hypothetical protein appser12_20140 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|307264682|ref|ZP_07546262.1| hypothetical protein appser13_20670 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|166218771|sp|A3N3Q8|Y1970_ACTP2 RecName: Full=UPF0758 protein APL_1970
 gi|238687531|sp|B0BTZ5|Y2017_ACTPJ RecName: Full=UPF0758 protein APJL_2017
 gi|238692412|sp|B3H340|Y2058_ACTP7 RecName: Full=UPF0758 protein APP7_2058
 gi|126098216|gb|ABN75044.1| DNA repair protein RadC-like protein [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165877514|gb|ABY70562.1| DNA repair protein [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|189916458|gb|ACE62710.1| DNA repair protein RadC-like protein [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649175|gb|EFL79360.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302650822|gb|EFL80979.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306852194|gb|EFM84434.1| hypothetical protein appser1_20990 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306854503|gb|EFM86698.1| hypothetical protein appser2_20080 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306856760|gb|EFM88895.1| hypothetical protein appser4_20050 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858897|gb|EFM90943.1| hypothetical protein appser6_21530 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306861159|gb|EFM93152.1| hypothetical protein appser9_21120 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306865595|gb|EFM97476.1| hypothetical protein appser11_21250 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306867851|gb|EFM99682.1| hypothetical protein appser12_20140 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306869994|gb|EFN01758.1| hypothetical protein appser13_20670 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 220

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI  E    GTI+   VY REI++  L+ +A +II+ HNHPSGN  PS++D 
Sbjct: 124 MFLDNQNRLIKKEKMFYGTINQATVYPREIIKEALKCNAAAIIVAHNHPSGNCTPSESDR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    + + I   DHI++GK  + SF+
Sbjct: 184 ALTKKLEMACDLVGIRFVDHIVVGKGDYFSFE 215


>gi|257465859|ref|ZP_05630170.1| DNA repair protein radC [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917016|ref|ZP_07913256.1| DNA repair protein radC [Fusobacterium gonidiaformans ATCC 25563]
 gi|313690891|gb|EFS27726.1| DNA repair protein radC [Fusobacterium gonidiaformans ATCC 25563]
          Length = 227

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N L+  E   +G+ID   VY REI+++ L+  A S+I  HNHPSGN  PS  DI
Sbjct: 131 LFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGNTQPSRQDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L   ++++ +HII+ K ++ SF
Sbjct: 191 ALTKEMKDALRMFDVLLIEHIIVSKHSYFSF 221


>gi|257452349|ref|ZP_05617648.1| DNA repair protein radC [Fusobacterium sp. 3_1_5R]
 gi|317058892|ref|ZP_07923377.1| DNA repair protein radC [Fusobacterium sp. 3_1_5R]
 gi|313684568|gb|EFS21403.1| DNA repair protein radC [Fusobacterium sp. 3_1_5R]
          Length = 227

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N L+  E   +G+ID   VY REI+++ L+  A S+I  HNHPSGN  PS  DI
Sbjct: 131 LFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGNTQPSRQDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L   ++++ +HII+ K ++ SF
Sbjct: 191 ALTKEMKDALRMFDVLLIEHIIVSKHSYFSF 221


>gi|271498728|ref|YP_003331753.1| DNA repair protein RadC [Dickeya dadantii Ech586]
 gi|270342283|gb|ACZ75048.1| DNA repair protein RadC [Dickeya dadantii Ech586]
          Length = 221

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  +    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 125 MFLDNQHRVICHQEMFAGTISRVEVHPREIVREALKVNAAALILAHNHPSGRAEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ I+     + I V DH++IG+  +VSF
Sbjct: 185 SITEKIVQACQLMEIRVLDHLVIGRGEYVSF 215


>gi|258511792|ref|YP_003185226.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478518|gb|ACV58837.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 233

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 61/93 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + ++A++  S G++D   V+ REI +R + +SA+SI+ +HNHPSG+P+PS  DI
Sbjct: 133 LLLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSPSPEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T+ ++     L I V DHI+IG   FVS + 
Sbjct: 193 AVTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRA 225


>gi|258590906|emb|CBE67201.1| DNA repair protein radC homolog [NC10 bacterium 'Dutch sediment']
          Length = 236

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 57/96 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           F++  N + A E   RGT+D   VY+R++++R L   A+  +L HNHPSG+P PS  D  
Sbjct: 141 FVNSKNAVTATECLQRGTVDQSVVYVRKVIERALVHKASGFLLAHNHPSGDPTPSPQDRE 200

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +TQ + T    + +   DH++IG  A  SFK + ++
Sbjct: 201 ITQALKTAAATVGVRFLDHLVIGDGAPFSFKAVGLL 236


>gi|218290834|ref|ZP_03494903.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius LAA1]
 gi|218239192|gb|EED06393.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius LAA1]
          Length = 233

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 61/93 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + ++A++  S G++D   V+ REI +R + +SA+SI+ +HNHPSG+P+PS  DI
Sbjct: 133 LLLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSPSPEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T+ ++     L I V DHI+IG   FVS + 
Sbjct: 193 AVTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRA 225


>gi|190572468|ref|YP_001970313.1| DNA repair protein RadC [Stenotrophomonas maltophilia K279a]
 gi|229485565|sp|B2FJW1|Y399_STRMK RecName: Full=UPF0758 protein Smlt0399
 gi|190010390|emb|CAQ43998.1| putative DNA repair protein RadC [Stenotrophomonas maltophilia
           K279a]
          Length = 234

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E    GTI+  PVY RE+V+R L  +A ++IL HNHPSG+P PS AD 
Sbjct: 129 LFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSSADT 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  +   L  +++ + DH ++G+   VSF  +GL
Sbjct: 189 RITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGL 224


>gi|241663908|ref|YP_002982268.1| DNA repair protein RadC [Ralstonia pickettii 12D]
 gi|240865935|gb|ACS63596.1| DNA repair protein RadC [Ralstonia pickettii 12D]
          Length = 224

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            FLD  + LIA E   RGT+    VY REI +R L  +A ++IL HNHP+GN  PS++D+
Sbjct: 128 FFLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  L++IV DH+I+G++    F
Sbjct: 188 ILTRELCRALAMLDVIVLDHMIVGRNHVYGF 218


>gi|194364059|ref|YP_002026669.1| DNA repair protein RadC [Stenotrophomonas maltophilia R551-3]
 gi|238693502|sp|B4STE3|Y281_STRM5 RecName: Full=UPF0758 protein Smal_0281
 gi|194346863|gb|ACF49986.1| DNA repair protein RadC [Stenotrophomonas maltophilia R551-3]
          Length = 234

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E    GTI+  PVY RE+V+R L  +A ++IL HNHPSG+P PS AD 
Sbjct: 129 LFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSSADT 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  +   L  +++ + DH ++G+   VSF  +GL
Sbjct: 189 RITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGL 224


>gi|269137424|ref|YP_003294124.1| DNA repair protein [Edwardsiella tarda EIB202]
 gi|267983084|gb|ACY82913.1| DNA repair protein [Edwardsiella tarda EIB202]
 gi|304557498|gb|ADM40162.1| DNA repair protein RadC [Edwardsiella tarda FL6-60]
          Length = 228

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTI+ V VY REIV+  L+L+A ++IL HNHPSGNP PS AD 
Sbjct: 132 LFLDNQHRVIRSEQMFSGTINCVDVYPREIVREALKLNAVALILAHNHPSGNPEPSVADR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      ++I V DH++IG    VSF
Sbjct: 192 LLTERVAKACALVDIQVLDHMVIGHGQRVSF 222


>gi|167855900|ref|ZP_02478650.1| DNA repair protein RadC [Haemophilus parasuis 29755]
 gi|167852988|gb|EDS24252.1| DNA repair protein RadC [Haemophilus parasuis 29755]
          Length = 238

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI  E    GTI+   V+ REI++  L+ +A +I++ HNHPSGN NPS+AD 
Sbjct: 126 IFLDNQNRLIKTEKMFYGTINQASVHPREIIKEALKCNAAAILVAHNHPSGNCNPSEADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ I    + ++I   DHII+GK  + SF+
Sbjct: 186 FLTRKIEMACDLVDIRFVDHIIVGKGDYFSFE 217


>gi|21243995|ref|NP_643577.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|21109610|gb|AAM38113.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 187

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I+ E    GT+D   V+ R + +R LELSA ++IL HNHPSGNP PS+AD 
Sbjct: 91  VFLDNQHHIISTEHLFTGTVDGCDVHPRVVAKRALELSAAAVILFHNHPSGNPEPSEADR 150

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L+ L+I V DH++IG    VS 
Sbjct: 151 KVTERLKQALSLLDIRVLDHLVIGGQQHVSL 181


>gi|219872082|ref|YP_002476457.1| DNA repair protein RadC [Haemophilus parasuis SH0165]
 gi|219692286|gb|ACL33509.1| DNA repair protein RadC [Haemophilus parasuis SH0165]
          Length = 197

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI  E    GTI+   V+ REI++  L+ +A +I++ HNHPSGN NPS+AD 
Sbjct: 85  IFLDNQNRLIKTEKMFYGTINQASVHPREIIKEALKCNAAAILVAHNHPSGNCNPSEADR 144

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ I    + ++I   DHII+GK  + SF+
Sbjct: 145 FLTRKIEMACDLVDIRFVDHIIVGKGDYFSFE 176


>gi|254522249|ref|ZP_05134304.1| DNA repair protein [Stenotrophomonas sp. SKA14]
 gi|219719840|gb|EED38365.1| DNA repair protein [Stenotrophomonas sp. SKA14]
          Length = 246

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E    GTI+  PVY RE+V+R L  +A ++IL HNHPSG+P PS AD 
Sbjct: 141 LFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSGADT 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  +++ + DH ++G+   VSF
Sbjct: 201 RITDELQQALALVDVRLLDHFVVGEGRPVSF 231


>gi|16130559|ref|NP_417131.1| CP4-57 prophage; predicted DNA repair protein [Escherichia coli
           str. K-12 substr. MG1655]
 gi|89109442|ref|AP_003222.1| predicted DNA repair protein [Escherichia coli str. K-12 substr.
           W3110]
 gi|170082243|ref|YP_001731563.1| CP4-57 prophage; DNA repair protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|238901798|ref|YP_002927594.1| CP4-57 prophage; putative DNA repair protein [Escherichia coli
           BW2952]
 gi|1723637|sp|P52140|YFJY_ECOLI RecName: Full=UPF0758 protein yfjY
 gi|1033138|gb|AAA79812.1| ORF_o160 [Escherichia coli str. K-12 substr. MG1655]
 gi|1788997|gb|AAC75692.1| CP4-57 prophage; predicted DNA repair protein [Escherichia coli
           str. K-12 substr. MG1655]
 gi|1800034|dbj|BAA16512.1| predicted DNA repair protein [Escherichia coli str. K12 substr.
           W3110]
 gi|169890078|gb|ACB03785.1| CP4-57 prophage; predicted DNA repair protein [Escherichia coli
           str. K-12 substr. DH10B]
 gi|238860625|gb|ACR62623.1| CP4-57 prophage; predicted DNA repair protein [Escherichia coli
           BW2952]
 gi|260448288|gb|ACX38710.1| DNA repair protein RadC [Escherichia coli DH1]
 gi|315137260|dbj|BAJ44419.1| CP4-57 prophage; putative DNA repair protein [Escherichia coli DH1]
          Length = 160

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LIA E    G+I    V+ RE+V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 64  LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ ++  L  ++I V DH+I+G     SF
Sbjct: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSF 154


>gi|299132649|ref|ZP_07025844.1| DNA repair protein RadC [Afipia sp. 1NLS2]
 gi|298592786|gb|EFI52986.1| DNA repair protein RadC [Afipia sp. 1NLS2]
          Length = 205

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/50 (74%), Positives = 43/50 (86%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLDK N LIADE+Q  GT+DH PVY RE+V+R LELSAT+IILVHNHP+
Sbjct: 143 LFLDKRNQLIADELQQVGTVDHTPVYPREVVKRALELSATAIILVHNHPT 192


>gi|238783986|ref|ZP_04628002.1| DNA repair protein radC [Yersinia bercovieri ATCC 43970]
 gi|238715094|gb|EEQ07090.1| DNA repair protein radC [Yersinia bercovieri ATCC 43970]
          Length = 249

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 153 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKANAAALILAHNHPSGRAEPSQADR 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MTQ +I   + L+I V DH+++G+   VSF
Sbjct: 213 LMTQQVIKACSLLDIRVLDHLVVGRGECVSF 243


>gi|158929981|gb|ABW82962.1| DNA repair protein [uncultured bacterium pEAF66]
          Length = 224

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 56/84 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L++ +   RGT+ H  VY RE+V+  L  +A S++L HNHPSG P PS+AD+
Sbjct: 128 LFLDVKNRLLSSQEMFRGTLTHTSVYPREVVKAALARNAASVLLAHNHPSGAPEPSEADL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T++++  L  +++ V DH ++ 
Sbjct: 188 ILTRSLVQALALVDVRVLDHFVVA 211


>gi|56476855|ref|YP_158444.1| RadC family DNA repair protein [Aromatoleum aromaticum EbN1]
 gi|56312898|emb|CAI07543.1| DNA repair protein similar to radC-family [Aromatoleum aromaticum
           EbN1]
          Length = 164

 Score = 81.3 bits (199), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   +GT+D   VY R +VQR L L+A+++IL H HPSGN  PS AD 
Sbjct: 68  VFLDNQHQVLAFEPLFKGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ + + L  +++ V DH I+GK +  SF
Sbjct: 128 AITERLKSALATVDVRVLDHFIVGKGSPYSF 158


>gi|323699098|ref|ZP_08111010.1| DNA repair protein RadC [Desulfovibrio sp. ND132]
 gi|323459030|gb|EGB14895.1| DNA repair protein RadC [Desulfovibrio desulfuricans ND132]
          Length = 229

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++A E  S+GT +   ++ REI    L+L AT++ILVHNHP G  +PS ADI
Sbjct: 133 VFLDTKNRVMAWEQMSKGTTNATAIFPREIAAAALKLEATNVILVHNHPGGGSDPSGADI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  ++     L+I V DHII+    + SF
Sbjct: 193 LLTDKVVEACASLDIAVRDHIIVTDHDYYSF 223


>gi|121594529|ref|YP_986425.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|120606609|gb|ABM42349.1| DNA repair protein RadC [Acidovorax sp. JS42]
          Length = 164

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   +GT+D   VY R +VQR L L+A+++IL H HPSGN  PS AD 
Sbjct: 68  VFLDNQHQVLAFEPLFKGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ + + L  +++ V DH I+GK +  SF
Sbjct: 128 AITERLKSALATVDVRVLDHFIVGKGSPYSF 158


>gi|239909102|ref|YP_002955844.1| DNA repair protein RadC [Desulfovibrio magneticus RS-1]
 gi|239798969|dbj|BAH77958.1| DNA repair protein RadC [Desulfovibrio magneticus RS-1]
          Length = 228

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            +D  N L+  E  S+GT+D   VY RE++   L  +A+ +ILVHNHP  +P PS  D+ 
Sbjct: 133 LVDTKNRLVGWERVSKGTVDQAAVYPREVIAMALRYNASGVILVHNHPGADPKPSAEDMA 192

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            T+ I+     ++I V DH+++ ++ F SF+ 
Sbjct: 193 FTRRIVAAAREMDIRVLDHLVVTENRFFSFQA 224


>gi|124267582|ref|YP_001021586.1| DNA repair protein [Methylibium petroleiphilum PM1]
 gi|124260357|gb|ABM95351.1| DNA repair protein [Methylibium petroleiphilum PM1]
          Length = 164

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   +GT+D   VY R +VQR L L+A+++IL H HPSGN  PS AD 
Sbjct: 68  VFLDNQHQVLAFEPLFKGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ + + L  +++ V DH I+GK +  SF
Sbjct: 128 AITERLKSALATVDVRVLDHFIVGKGSPYSF 158


>gi|254241654|ref|ZP_04934976.1| DNA repair protein RadC [Pseudomonas aeruginosa 2192]
 gi|126195032|gb|EAZ59095.1| DNA repair protein RadC [Pseudomonas aeruginosa 2192]
          Length = 169

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D  + LI      RGTID   VY RE V+  L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 73  LFMDTQHRLIEYAEMFRGTIDGASVYPRERVKEALRLNAAAVIVSHNHPSGNPEPSGADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  +++ V DH+I+      SF  +GL
Sbjct: 133 ALTQRLKEALGLVDVRVLDHVIVAGTDTTSFAERGL 168


>gi|237807914|ref|YP_002892354.1| DNA repair protein RadC [Tolumonas auensis DSM 9187]
 gi|237500175|gb|ACQ92768.1| DNA repair protein RadC [Tolumonas auensis DSM 9187]
          Length = 165

 Score = 80.9 bits (198), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 63/96 (65%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   RGT++   ++ RE+V+R L ++A ++I VHNHPSG P PS+AD 
Sbjct: 69  LFLDNQHRIICFEELFRGTLNVTNIHPREVVKRALAVNAAAVIFVHNHPSGEPEPSEADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  +  TLN +++ V DHI++G  A +S   +GL
Sbjct: 129 KITVQLRETLNLIDVRVLDHIVVGAKACISMAERGL 164


>gi|190570883|ref|YP_001975241.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190571715|ref|YP_001976073.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019311|ref|ZP_03335118.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|213019396|ref|ZP_03335202.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357155|emb|CAQ54567.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190357987|emb|CAQ55450.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212994818|gb|EEB55460.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995420|gb|EEB56061.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 222

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 1/92 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LDK N LI DEV   GTID V +  R++V++ L + A SIIL HNHP G+  PS+ D 
Sbjct: 127 IYLDKQNRLIRDEVYF-GTIDEVHLSERKVVKKALSMEAASIILSHNHPGGSLEPSEDDK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT+ +++    + I + DHII+    + SFK
Sbjct: 186 VMTRELVSACQGVGIELEDHIIMTDKGYCSFK 217


>gi|301644226|ref|ZP_07244233.1| DNA repair protein RadC family protein [Escherichia coli MS 146-1]
 gi|301077423|gb|EFK92229.1| DNA repair protein RadC family protein [Escherichia coli MS 146-1]
          Length = 161

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    G++ HV V+ RE+V+  L  +A +++L HNHPSG+P PS  D 
Sbjct: 65  LYLDNQHRLLESETLFAGSVYHVQVHPREVVKSALRFNAAAVVLAHNHPSGDPEPSKVDR 124

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT  +   L  +++   DH+++G+D  VSF
Sbjct: 125 QMTDKLKEVLGLVDVKTLDHLVVGQDGIVSF 155


>gi|261210491|ref|ZP_05924785.1| DNA repair protein RadC [Vibrio sp. RC341]
 gi|260840549|gb|EEX67115.1| DNA repair protein RadC [Vibrio sp. RC341]
          Length = 224

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  + I V DH +IG    VSF
Sbjct: 188 RITDRLRDALGLVEIRVLDHFVIGDGEVVSF 218


>gi|322382581|ref|ZP_08056459.1| RadC-like protein [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153436|gb|EFX45843.1| RadC-like protein [Paenibacillus larvae subsp. larvae B-3650]
          Length = 209

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 60/92 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++A E  S G+++   V+ RE+ +  ++ S+ SII VHNHPSGNP PS  DI
Sbjct: 113 LFLNTKNQVLAKETMSIGSLNASIVHPREVFRAAIKRSSASIICVHNHPSGNPTPSLDDI 172

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++TQ +I     + I V DHIIIG  A+VS K
Sbjct: 173 DITQRLIEAGAIIGIDVLDHIIIGDKAYVSLK 204


>gi|262168070|ref|ZP_06035769.1| DNA repair protein RadC [Vibrio cholerae RC27]
 gi|262023603|gb|EEY42305.1| DNA repair protein RadC [Vibrio cholerae RC27]
          Length = 151

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 55  LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 114

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  + I V DH ++G    VSF
Sbjct: 115 RITDRLRDALGLVEIRVLDHFVVGDGEVVSF 145


>gi|209693807|ref|YP_002261735.1| DNA repair protein RadC [Aliivibrio salmonicida LFI1238]
 gi|238058401|sp|B6EPP3|Y192_ALISL RecName: Full=UPF0758 protein VSAL_I0192
 gi|208007758|emb|CAQ77877.1| DNA repair protein RadC [Aliivibrio salmonicida LFI1238]
          Length = 224

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  EV   GTID   VY RE+V+R ++ +A +IIL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVLKGEVLFEGTIDAAAVYPREVVKRSIDYNAAAIILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I   +  ++I V DH +IG    VSF
Sbjct: 188 RITKRISDAVELVDIRVLDHFVIGDGEIVSF 218


>gi|309781502|ref|ZP_07676238.1| DNA repair protein RadC [Ralstonia sp. 5_7_47FAA]
 gi|308919915|gb|EFP65576.1| DNA repair protein RadC [Ralstonia sp. 5_7_47FAA]
          Length = 224

 Score = 80.5 bits (197), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            FLD  + LIA E   RGT+    VY REI +R L  +A ++IL HNHP+GN  PS++D+
Sbjct: 128 FFLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  L++IV DH+I+G++    F
Sbjct: 188 ILTRELRRALAMLDVIVLDHMIVGRNHVYGF 218


>gi|262163757|ref|ZP_06031497.1| DNA repair protein RadC [Vibrio mimicus VM223]
 gi|262027737|gb|EEY46402.1| DNA repair protein RadC [Vibrio mimicus VM223]
          Length = 224

 Score = 80.5 bits (197), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L+ + I V DH ++G    VSF
Sbjct: 188 RITDRLRDALSLVEIRVLDHFVVGDGEVVSF 218


>gi|209917488|ref|YP_002291572.1| hypothetical protein ECSE_0297 [Escherichia coli SE11]
 gi|209910747|dbj|BAG75821.1| hypothetical phage protein [Escherichia coli SE11]
          Length = 180

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    G+I+HV V+ RE+V+  L  +A +++L HNHPSG+P PS  D 
Sbjct: 84  LYLDNQHRLLESETLFAGSINHVQVHPREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDR 143

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           N+T  +   L  +++   DH++IG D  VSF
Sbjct: 144 NITGRLKEALALVDVNTLDHLVIGSDGIVSF 174


>gi|258620577|ref|ZP_05715614.1| DNA repair protein RadC [Vibrio mimicus VM573]
 gi|258625887|ref|ZP_05720762.1| DNA repair protein RadC [Vibrio mimicus VM603]
 gi|258581851|gb|EEW06725.1| DNA repair protein RadC [Vibrio mimicus VM603]
 gi|258587092|gb|EEW11804.1| DNA repair protein RadC [Vibrio mimicus VM573]
          Length = 224

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L+ + I V DH ++G    VSF
Sbjct: 188 RITDRLRDALSLVEIRVLDHFVVGDGEVVSF 218


>gi|153800833|ref|ZP_01955419.1| DNA repair protein RadC [Vibrio cholerae MZO-3]
 gi|153825955|ref|ZP_01978622.1| DNA repair protein RadC [Vibrio cholerae MZO-2]
 gi|153831399|ref|ZP_01984066.1| DNA repair protein RadC [Vibrio cholerae 623-39]
 gi|229521064|ref|ZP_04410485.1| DNA repair protein RadC [Vibrio cholerae TM 11079-80]
 gi|229527280|ref|ZP_04416673.1| DNA repair protein RadC [Vibrio cholerae 12129(1)]
 gi|262404954|ref|ZP_06081506.1| DNA repair protein RadC [Vibrio sp. RC586]
 gi|297581670|ref|ZP_06943592.1| DNA repair protein RadC [Vibrio cholerae RC385]
 gi|124123664|gb|EAY42407.1| DNA repair protein RadC [Vibrio cholerae MZO-3]
 gi|148873120|gb|EDL71255.1| DNA repair protein RadC [Vibrio cholerae 623-39]
 gi|149740363|gb|EDM54499.1| DNA repair protein RadC [Vibrio cholerae MZO-2]
 gi|229335288|gb|EEO00772.1| DNA repair protein RadC [Vibrio cholerae 12129(1)]
 gi|229341949|gb|EEO06950.1| DNA repair protein RadC [Vibrio cholerae TM 11079-80]
 gi|262348793|gb|EEY97934.1| DNA repair protein RadC [Vibrio sp. RC586]
 gi|297534077|gb|EFH72916.1| DNA repair protein RadC [Vibrio cholerae RC385]
 gi|327483097|gb|AEA77504.1| DNA repair protein RadC [Vibrio cholerae LMA3894-4]
          Length = 224

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  + I V DH ++G    VSF
Sbjct: 188 RITDRLRDALGLVEIRVLDHFVVGDGEVVSF 218


>gi|91784962|ref|YP_560168.1| DNA repair protein RadC [Burkholderia xenovorans LB400]
 gi|123168147|sp|Q13UX3|Y3578_BURXL RecName: Full=UPF0758 protein Bxeno_A3578
 gi|91688916|gb|ABE32116.1| DNA replication and repair protein RadC [Burkholderia xenovorans
           LB400]
          Length = 253

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  ++GT+  + VY REIV+R L L+A S+I+ HNHPSG   PS +D 
Sbjct: 157 LFLDARHRLIRCEESAQGTLTRMAVYPREIVRRALSLNAASLIVAHNHPSGAVQPSASDC 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  +++ + DH++IG D+  SF
Sbjct: 217 RLTHTLRDALTLIDVQLVDHLVIGTDSVYSF 247


>gi|296157154|ref|ZP_06839990.1| DNA repair protein RadC [Burkholderia sp. Ch1-1]
 gi|295892490|gb|EFG72272.1| DNA repair protein RadC [Burkholderia sp. Ch1-1]
          Length = 253

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  ++GT+  + VY REIV+R L L+A S+I+ HNHPSG   PS +D 
Sbjct: 157 LFLDARHRLIRCEESAQGTLTRMAVYPREIVRRALSLNAASLIVAHNHPSGAVQPSASDC 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  +++ + DH++IG D+  SF
Sbjct: 217 RLTHTLRDALTLIDVQLVDHLVIGTDSVYSF 247


>gi|262172690|ref|ZP_06040368.1| DNA repair protein RadC [Vibrio mimicus MB-451]
 gi|261893766|gb|EEY39752.1| DNA repair protein RadC [Vibrio mimicus MB-451]
          Length = 224

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHNNAAAVILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L+ + I V DH ++G    VSF
Sbjct: 188 RITDRLRDALSLVEIRVLDHFVVGDGEVVSF 218


>gi|262392595|ref|YP_003284449.1| DNA repair protein RadC [Vibrio sp. Ex25]
 gi|262336189|gb|ACY49984.1| DNA repair protein RadC [Vibrio sp. Ex25]
          Length = 224

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  ++I + DH +IG    VSF
Sbjct: 188 RITRRLTDALALVDIRILDHFVIGDGESVSF 218


>gi|217969374|ref|YP_002354608.1| DNA repair protein RadC [Thauera sp. MZ1T]
 gi|217506701|gb|ACK53712.1| DNA repair protein RadC [Thauera sp. MZ1T]
          Length = 164

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   +GT+D   VY R +VQR L L+A+++IL H HPSGN  PS AD 
Sbjct: 68  VFLDNQHQVLAFEPLFQGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ + + L  +++ V DH I+GK +  SF
Sbjct: 128 AITERLKSALATVDVRVLDHFIVGKGSPYSF 158


>gi|15640247|ref|NP_229874.1| DNA repair protein RadC [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|147674401|ref|YP_001218476.1| DNA repair protein RadC [Vibrio cholerae O395]
 gi|153820026|ref|ZP_01972693.1| DNA repair protein RadC [Vibrio cholerae NCTC 8457]
 gi|227080437|ref|YP_002808988.1| DNA repair protein RadC [Vibrio cholerae M66-2]
 gi|229506982|ref|ZP_04396490.1| DNA repair protein RadC [Vibrio cholerae BX 330286]
 gi|229509352|ref|ZP_04398835.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229516299|ref|ZP_04405747.1| DNA repair protein RadC [Vibrio cholerae RC9]
 gi|229606490|ref|YP_002877138.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|254851346|ref|ZP_05240696.1| DNA repair protein RadC [Vibrio cholerae MO10]
 gi|255744029|ref|ZP_05417983.1| DNA repair protein RadC [Vibrio cholera CIRS 101]
 gi|298500859|ref|ZP_07010661.1| DNA repair protein RadC [Vibrio cholerae MAK 757]
 gi|13431812|sp|Q9KVC9|Y217_VIBCH RecName: Full=UPF0758 protein VC_0217
 gi|172047481|sp|A5F402|Y3797_VIBC3 RecName: Full=UPF0758 protein VC0395_A2597/VC395_0249
 gi|254789668|sp|C3LQH9|Y205_VIBCM RecName: Full=UPF0758 protein VCM66_0205
 gi|9654624|gb|AAF93393.1| DNA repair protein RadC [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126509430|gb|EAZ72024.1| DNA repair protein RadC [Vibrio cholerae NCTC 8457]
 gi|146316284|gb|ABQ20823.1| DNA repair protein RadC [Vibrio cholerae O395]
 gi|227008325|gb|ACP04537.1| DNA repair protein RadC [Vibrio cholerae M66-2]
 gi|227012064|gb|ACP08274.1| DNA repair protein RadC [Vibrio cholerae O395]
 gi|229346725|gb|EEO11695.1| DNA repair protein RadC [Vibrio cholerae RC9]
 gi|229353667|gb|EEO18604.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229356087|gb|EEO21006.1| DNA repair protein RadC [Vibrio cholerae BX 330286]
 gi|229369145|gb|ACQ59568.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|254847051|gb|EET25465.1| DNA repair protein RadC [Vibrio cholerae MO10]
 gi|255738294|gb|EET93685.1| DNA repair protein RadC [Vibrio cholera CIRS 101]
 gi|297540363|gb|EFH76422.1| DNA repair protein RadC [Vibrio cholerae MAK 757]
          Length = 224

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  + I V DH ++G    VSF
Sbjct: 188 RITDRLRDALGLVEIRVLDHFVVGDGEVVSF 218


>gi|269965912|ref|ZP_06180005.1| DNA repair protein RadC [Vibrio alginolyticus 40B]
 gi|269829465|gb|EEZ83706.1| DNA repair protein RadC [Vibrio alginolyticus 40B]
          Length = 214

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 118 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  ++I + DH +IG    VSF
Sbjct: 178 RITRRLTDALALVDIRILDHFVIGDGESVSF 208


>gi|320666351|gb|EFX33350.1| hypothetical protein ECOSU61_04303 [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 222

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +N+ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMNLRVLDHIVIGRGEYVSF 216


>gi|229524831|ref|ZP_04414236.1| DNA repair protein RadC [Vibrio cholerae bv. albensis VL426]
 gi|229338412|gb|EEO03429.1| DNA repair protein RadC [Vibrio cholerae bv. albensis VL426]
          Length = 224

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  + I V DH ++G    VSF
Sbjct: 188 RITGRLRDALGLVEIRVLDHFVVGDGEVVSF 218


>gi|192360376|ref|YP_001983975.1| DNA repair protein RadC [Cellvibrio japonicus Ueda107]
 gi|238692434|sp|B3PG68|Y3522_CELJU RecName: Full=UPF0758 protein CJA_3522
 gi|190686541|gb|ACE84219.1| DNA repair protein RadC [Cellvibrio japonicus Ueda107]
          Length = 224

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   +GTID   VY RE+V++ L  +A ++I  HNHPSG   PS ADI
Sbjct: 128 LFLDNQNRLIAYEELFQGTIDGANVYPREVVKQALAHNAAAVIFAHNHPSGLAEPSQADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  ++I V DH+++G    VS 
Sbjct: 188 RITRRLQEALGLVDIRVLDHLVVGDGELVSL 218


>gi|299531454|ref|ZP_07044862.1| DNA repair protein RadC [Comamonas testosteroni S44]
 gi|298720617|gb|EFI61566.1| DNA repair protein RadC [Comamonas testosteroni S44]
          Length = 230

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V R L   A ++IL HNHPSG+  PS AD 
Sbjct: 134 LFLDSQNRLLALEEMFRGTLTQTSVYPREVVLRALHHQAGAVILAHNHPSGSVQPSSADR 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T  +   L  +++ V DHII+G  A  S 
Sbjct: 194 SLTNTLKAALALIDVRVLDHIIVGPGAACSM 224


>gi|260770727|ref|ZP_05879657.1| DNA repair protein RadC [Vibrio furnissii CIP 102972]
 gi|260614308|gb|EEX39497.1| DNA repair protein RadC [Vibrio furnissii CIP 102972]
 gi|315178477|gb|ADT85391.1| DNA repair protein RadC [Vibrio furnissii NCTC 11218]
          Length = 224

 Score = 80.5 bits (197), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DEV   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS +D 
Sbjct: 128 LFLDNQHRVIRDEVLFEGTIDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSTSDR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  ++I V DH ++G    VSF
Sbjct: 188 RITRRLTDALALVDIRVLDHFVVGDGEVVSF 218


>gi|295677432|ref|YP_003605956.1| DNA repair protein RadC [Burkholderia sp. CCGE1002]
 gi|295437275|gb|ADG16445.1| DNA repair protein RadC [Burkholderia sp. CCGE1002]
          Length = 303

 Score = 80.1 bits (196), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  +RG++  + VY REIV+R L  +A S+I+ HNHPSG   PS +D 
Sbjct: 180 LFLDARHRLIRCEESARGSLTRMAVYPREIVRRALAANAASLIVAHNHPSGAVEPSASDC 239

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ + DH++IG D+  SF
Sbjct: 240 RLTQTLRDALALVDVQLIDHLVIGADSVYSF 270


>gi|326318501|ref|YP_004236173.1| DNA repair protein RadC [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375337|gb|ADX47606.1| DNA repair protein RadC [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 237

 Score = 80.1 bits (196), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGT+    VY RE+V R L   A +++LVHNHPSG   PS AD 
Sbjct: 141 LFLDSQNGLIAMEEMFRGTLSQASVYPREVVVRALHHHAAAVVLVHNHPSGQVQPSRADE 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+++   L  ++I V DHII+   A +S 
Sbjct: 201 TLTRSLTDALRLVDIRVLDHIIVAPGASLSM 231


>gi|153214714|ref|ZP_01949559.1| DNA repair protein RadC [Vibrio cholerae 1587]
 gi|124115150|gb|EAY33970.1| DNA repair protein RadC [Vibrio cholerae 1587]
          Length = 109

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 13  LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 72

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  + I V DH ++G    VSF
Sbjct: 73  RITDRLRDALGLVEIRVLDHFVVGDGEVVSF 103


>gi|167465896|ref|ZP_02330985.1| RadC [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 145

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 60/92 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++A E  S G+++   V+ RE+ +  ++ S+ SII VHNHPSGNP PS  DI
Sbjct: 49  LFLNTKNQVLAKETMSIGSLNASIVHPREVFRAAIKRSSASIICVHNHPSGNPTPSLDDI 108

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++TQ +I     + I V DHIIIG  A+VS K
Sbjct: 109 DITQRLIEAGAIIGIDVLDHIIIGDKAYVSLK 140


>gi|146306213|ref|YP_001186678.1| DNA repair protein RadC [Pseudomonas mendocina ymp]
 gi|145574414|gb|ABP83946.1| DNA repair protein RadC [Pseudomonas mendocina ymp]
          Length = 165

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I+ E   RGT+D   VY RE+V+  L  +A ++ILVHNHPSG+P+PS ADI
Sbjct: 69  LLLDSKHRVISFEELFRGTLDAASVYPREVVKTVLAHNAAAVILVHNHPSGDPSPSQADI 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +     DH I+G +  VS 
Sbjct: 129 RLTQTLKNALVMVGTTTLDHFIVGSEGIVSL 159


>gi|82703257|ref|YP_412823.1| DNA repair protein RadC [Nitrosospira multiformis ATCC 25196]
 gi|123544109|sp|Q2Y740|Y2138_NITMU RecName: Full=UPF0758 protein Nmul_A2138
 gi|82411322|gb|ABB75431.1| DNA replication and repair protein RadC [Nitrosospira multiformis
           ATCC 25196]
          Length = 224

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +IA E   +GT+    VY RE+V+R L  +A ++I  HNHPSG   PS AD 
Sbjct: 128 IFLDARNRVIATEELFQGTLTQTSVYPREVVKRALHHNAAAVIFAHNHPSGAAEPSHADA 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ++   L  +++ V DH I+G+ A +SF
Sbjct: 188 VLTQSLKQALLLVDVRVLDHFIVGRGATLSF 218


>gi|197334055|ref|YP_002154894.1| DNA repair protein RadC [Vibrio fischeri MJ11]
 gi|238690291|sp|B5FFF6|Y123_VIBFM RecName: Full=UPF0758 protein VFMJ11_0123
 gi|197315545|gb|ACH64992.1| DNA repair protein RadC [Vibrio fischeri MJ11]
          Length = 224

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+   GTID   VY RE+V+R ++ +A +IIL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVLKGEILFEGTIDAAAVYPREVVKRSIDYNAAAIILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I   +  ++I V DH +IG    VSF
Sbjct: 188 RITKRISDAVELVDIRVLDHFVIGDGEIVSF 218


>gi|238918036|ref|YP_002931550.1| DNA repair protein RadC [Edwardsiella ictaluri 93-146]
 gi|238867604|gb|ACR67315.1| DNA repair protein RadC [Edwardsiella ictaluri 93-146]
          Length = 228

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTI+ V VY REIV+  L+L+A ++IL HNHPSGNP PS AD 
Sbjct: 132 LFLDNQHRVIRSEQMFSGTINCVDVYPREIVREALKLNAVALILAHNHPSGNPEPSVADR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +      ++I V DH++IG    VSF
Sbjct: 192 LLTDRVAKACALVDIQVLDHMVIGHGQRVSF 222


>gi|222110476|ref|YP_002552740.1| DNA repair protein Radc [Acidovorax ebreus TPSY]
 gi|221729920|gb|ACM32740.1| DNA repair protein RadC [Acidovorax ebreus TPSY]
          Length = 168

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A +++  HNHPSG+P PS AD 
Sbjct: 72  LFLDSQHRLIEYVELFRGTIDQASVYPREVVKEALRLNAAAVVFSHNHPSGSPEPSQADR 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++   DHI++G     SF
Sbjct: 132 VLTQRLKEALALVDVRTLDHIVVGGAVTTSF 162


>gi|188025457|ref|ZP_02958709.2| hypothetical protein PROSTU_00459 [Providencia stuartii ATCC 25827]
 gi|188023530|gb|EDU61570.1| hypothetical protein PROSTU_00459 [Providencia stuartii ATCC 25827]
          Length = 222

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + +I+ E   RGTI+ V V+ REI++  ++++A++IIL HNHPSGNP PSDAD 
Sbjct: 126 LFLNNQHQIISYEELFRGTINRVEVHPREIIRFAMKMNASAIILAHNHPSGNPEPSDADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I      + I + DH ++G    VSF
Sbjct: 186 QVTFRIKEACTLMGIKLLDHFVVGHKNCVSF 216


>gi|253991844|ref|YP_003043200.1| DNA repair protein RadC [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253783294|emb|CAQ86459.1| dna repair protein radc [Photorhabdus asymbiotica]
          Length = 230

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  E   +GTI+ V V+ REIV+  ++++A+SIIL HNHPSG+  PS AD 
Sbjct: 134 LFLNNQNKVICHEEMFKGTINKVEVHPREIVRSAIKVNASSIILAHNHPSGHAEPSLADK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +I   N + I V DH++IG+   VSF
Sbjct: 194 IVTDKVIDACNLVGIQVLDHLVIGRQCCVSF 224


>gi|313109023|ref|ZP_07794996.1| RadC-like protein [Pseudomonas aeruginosa 39016]
 gi|310881498|gb|EFQ40092.1| RadC-like protein [Pseudomonas aeruginosa 39016]
          Length = 169

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D  + LI       GTID   VY RE+V+  L L+A ++++ HNHPSGNP PS AD 
Sbjct: 73  LFMDTRHRLIEYREMFHGTIDGASVYPREVVKEALRLNAAAVVVSHNHPSGNPEPSAADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DHII+  +   SF
Sbjct: 133 ALTQRLKEALGLVDVRVLDHIIVAGNETASF 163


>gi|330824402|ref|YP_004387705.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
 gi|329309774|gb|AEB84189.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
          Length = 164

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   +GT+D   VY R +VQR L L+A+++IL H HPSGN  PS AD 
Sbjct: 68  VFLDNQHQVLAFEPLFKGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ + + L  ++  V DH I+GK +  SF
Sbjct: 128 AITERLKSALATVDARVLDHFIVGKGSPYSF 158


>gi|221065434|ref|ZP_03541539.1| DNA repair protein RadC [Comamonas testosteroni KF-1]
 gi|220710457|gb|EED65825.1| DNA repair protein RadC [Comamonas testosteroni KF-1]
          Length = 230

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V R L   A ++IL HNHPSG+  PS AD 
Sbjct: 134 LFLDSQNRLLALEEMFRGTLTQTSVYPREVVLRALHHHAGAVILAHNHPSGSVQPSSADC 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  +++ V DHII+G  A  S 
Sbjct: 194 ALTATLKAALALIDVRVLDHIIVGPGAACSM 224


>gi|187251767|ref|YP_001876249.1| DNA repair protein RadC [Elusimicrobium minutum Pei191]
 gi|186971927|gb|ACC98912.1| DNA repair protein RadC [Elusimicrobium minutum Pei191]
          Length = 228

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 56/93 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  EV S G ID   +  R++V+  L+  A  I+LVHNHPSG+P+PS  DI
Sbjct: 132 IYLTVRNTVIGTEVLSVGAIDRASISPRKVVEGALKAKAVGIVLVHNHPSGDPSPSMEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           + T+ +      L I+VHDHII+ +  + S + 
Sbjct: 192 SFTKEVAQAARILGIMVHDHIIVVRGGYYSMRA 224


>gi|255292016|dbj|BAH90499.1| DNA repair protein RadC [uncultured bacterium]
 gi|255292877|dbj|BAH89977.1| DNA repair protein RadC [uncultured bacterium]
 gi|255292945|dbj|BAH90043.1| DNA repair protein RadC [uncultured bacterium]
 gi|255293215|dbj|BAH90305.1| DNA repair protein RadC [uncultured bacterium]
          Length = 169

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D  + LI      RGTID   VY RE+V+  L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 73  LFMDTQHRLIEYAEMFRGTIDSASVYPRELVKEALRLNAAAVIISHNHPSGNPEPSQADK 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L  +++   DHII+      SF  +GL
Sbjct: 133 VLTRQLKEVLALVDVRTLDHIIVAGTTTTSFAERGL 168


>gi|121606228|ref|YP_983557.1| DNA repair protein RadC [Polaromonas naphthalenivorans CJ2]
 gi|171769297|sp|A1VSK8|Y3339_POLNA RecName: Full=UPF0758 protein Pnap_3339
 gi|120595197|gb|ABM38636.1| DNA replication and repair protein RadC [Polaromonas
           naphthalenivorans CJ2]
          Length = 224

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGT+    VY RE+V R L L+A S++L HNHPSG   PS AD 
Sbjct: 128 LFLDSQHRLIALEELFRGTLTQTSVYPREVVIRALALNAASVVLAHNHPSGAAQPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + T L  +++ V DH ++     VS   + ++
Sbjct: 188 MLTQTLKTALALVDVRVLDHFVVTASLAVSMAEMGLV 224


>gi|317493871|ref|ZP_07952288.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918198|gb|EFV39540.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 159

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LIA E    G+I    V+ RE+V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 63  LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSLADK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ+++  L  ++I V DH+I+G    +SF
Sbjct: 123 TITQHLVQALQLVDIRVPDHLIVGGAQILSF 153


>gi|83643512|ref|YP_431947.1| DNA repair protein [Hahella chejuensis KCTC 2396]
 gi|83631555|gb|ABC27522.1| DNA repair protein [Hahella chejuensis KCTC 2396]
          Length = 146

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  +   RGT D   +++REI ++ L L+A ++IL HNHPS N  PS ADI
Sbjct: 50  MFLDNQHRVIEFDAMFRGTFDKATIHVREIAKKALLLNAAAVILSHNHPSQNSTPSQADI 109

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I  +LN   + V DH+IIG     SF
Sbjct: 110 RITEEIKKSLNFFEVRVLDHVIIGGTNKYSF 140


>gi|88858999|ref|ZP_01133640.1| associated with replication fork DNA repair protein
           [Pseudoalteromonas tunicata D2]
 gi|88819225|gb|EAR29039.1| associated with replication fork DNA repair protein
           [Pseudoalteromonas tunicata D2]
          Length = 245

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  ++   GTI+   VY RE+V+  L+++A ++I  HNHPSG   PS AD 
Sbjct: 149 LFLDNQNRLICQKILFYGTINAAAVYPREVVKEVLKMNANAVIFAHNHPSGIAEPSQADQ 208

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L+ +++ V DH+I+G +  VSF  +GL
Sbjct: 209 VITRKLTQALSLIDVAVLDHLIVGGNQVVSFAERGL 244


>gi|134095642|ref|YP_001100717.1| DNA repair protein RadC [Herminiimonas arsenicoxydans]
 gi|166218782|sp|A4G7V9|Y2468_HERAR RecName: Full=UPF0758 protein HEAR2468
 gi|133739545|emb|CAL62596.1| DNA repair protein RadC homolog [Herminiimonas arsenicoxydans]
          Length = 224

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  +   RGT+ H  VY REIV+  L  +A S+IL HNHPSG P PS AD 
Sbjct: 128 LFLDVKNRLIVCDEMFRGTLTHTSVYPREIVKAALGHNAASVILAHNHPSGTPEPSAADQ 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DH ++      SF
Sbjct: 188 TLTQALKQALMLIDVRVLDHFVVAGKQVYSF 218


>gi|261494189|ref|ZP_05990691.1| DNA repair protein RadC [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495585|ref|ZP_05992031.1| DNA repair protein RadC [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308692|gb|EEY09949.1| DNA repair protein RadC [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310170|gb|EEY11371.1| DNA repair protein RadC [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 245

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  E    GTI+   V+ REI++R L+ +A +II+ HNHPSG+  PS++D 
Sbjct: 136 LFLDNQNRLIYKEKMFFGTINQTAVHPREIIKRALKYNAAAIIVAHNHPSGSCLPSESDR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ I      ++I   DHII+GK  + SF+
Sbjct: 196 SLTKKIEMACELVDIRFVDHIIVGKGDYFSFE 227


>gi|238898968|ref|YP_002924650.1| associated with replication fork, possible DNA repair protein
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229466728|gb|ACQ68502.1| associated with replication fork, possible DNA repair protein
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 222

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I+ E    GTID V V+ RE++++ L ++A +IIL HNHPSG P PS AD 
Sbjct: 126 LFLNNKNRVISYEELFSGTIDTVEVHPREVLRKALTVNAAAIILAHNHPSGEPEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  II     L+I V DHI+IG    VSF
Sbjct: 186 LITTQIIEASALLDIRVLDHIVIGHGKCVSF 216


>gi|172046847|sp|Q12EY8|Y948_POLSJ RecName: Full=UPF0758 protein Bpro_0948
          Length = 224

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGT+    VY RE+V R L L+A S++L HNHPSG   PS AD 
Sbjct: 128 LFLDSQHRLIALEELFRGTLTQTSVYPREVVVRALALNAASVVLAHNHPSGAATPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + + L  +++ V DH ++     VS   L ++
Sbjct: 188 ALTQTLKSALALVDVRVLDHFVVTSTQAVSMAELGLL 224


>gi|238798215|ref|ZP_04641701.1| DNA repair protein, RadC family [Yersinia mollaretii ATCC 43969]
 gi|238717952|gb|EEQ09782.1| DNA repair protein, RadC family [Yersinia mollaretii ATCC 43969]
          Length = 157

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 57/94 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+A E  S GT +   VY RE+V R L     ++++ HNHP+G+P PS AD 
Sbjct: 59  LFLDNRHRLMASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADR 118

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T  ++  LN ++I V DH+IIG+   VS   L
Sbjct: 119 TLTARLVNALNMVDIRVLDHLIIGESEPVSLAEL 152


>gi|238756176|ref|ZP_04617495.1| DNA repair protein, RadC family [Yersinia ruckeri ATCC 29473]
 gi|238705591|gb|EEP97989.1| DNA repair protein, RadC family [Yersinia ruckeri ATCC 29473]
          Length = 157

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 57/94 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+A E  S GT +   VY RE+V R L     ++++ HNHP+G+P PS AD 
Sbjct: 59  LFLDNRHRLMASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADR 118

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T  ++  LN ++I V DH+IIG+   VS   L
Sbjct: 119 TLTARLVNALNMVDIRVLDHLIIGESEPVSLAEL 152


>gi|294637895|ref|ZP_06716164.1| DNA repair protein RadC [Edwardsiella tarda ATCC 23685]
 gi|291088921|gb|EFE21482.1| DNA repair protein RadC [Edwardsiella tarda ATCC 23685]
          Length = 227

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTI+ V VY REIV+  L+L+A ++IL HNHPSGNP PS AD 
Sbjct: 131 LFLDNQHRVIRSEQMFSGTINCVDVYPREIVREALKLNAVALILAHNHPSGNPEPSVADR 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +      ++I V DH++IG    VSF
Sbjct: 191 LLTARVAKACALVDIQVLDHMVIGCGQRVSF 221


>gi|120597983|ref|YP_962557.1| DNA repair protein RadC [Shewanella sp. W3-18-1]
 gi|120558076|gb|ABM24003.1| DNA repair protein RadC [Shewanella sp. W3-18-1]
          Length = 165

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GT+D   VY RE+ +R LEL+  ++ILVHNHPSG+P PS++D 
Sbjct: 69  LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNVAAVILVHNHPSGDPEPSESDK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L+ ++I   DH+++  +  VS 
Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSL 159


>gi|298292919|ref|YP_003694858.1| DNA repair protein RadC [Starkeya novella DSM 506]
 gi|296929430|gb|ADH90239.1| DNA repair protein RadC [Starkeya novella DSM 506]
          Length = 217

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/50 (68%), Positives = 43/50 (86%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLDK N LI DEVQ RGT+DH PVY RE+V+R LE++A+++ILVHNHP+
Sbjct: 155 LFLDKRNQLILDEVQQRGTVDHTPVYPREVVKRALEVAASAVILVHNHPT 204


>gi|237739010|ref|ZP_04569491.1| DNA repair protein radC [Fusobacterium sp. 2_1_31]
 gi|229423610|gb|EEO38657.1| DNA repair protein radC [Fusobacterium sp. 2_1_31]
          Length = 242

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +IA E  S GT+D   +Y REI +R +  +A SII+ HNHPSGN  PS  DI
Sbjct: 146 IYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNTCPSKCDI 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T  I   L     ++ +HIII +D++ SF
Sbjct: 206 DITNEIAKGLKNFGALLLEHIIITRDSYFSF 236


>gi|153948236|ref|YP_001399737.1| RadC family DNA repair protein [Yersinia pseudotuberculosis IP
           31758]
 gi|152959731|gb|ABS47192.1| DNA repair protein, RadC family [Yersinia pseudotuberculosis IP
           31758]
          Length = 162

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 57/94 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+A E  S GT +   VY RE+V R L     ++++ HNHP+G+P PS AD 
Sbjct: 64  LFLDNRHRLMASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADR 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T  ++  LN ++I V DH+IIG+   VS   L
Sbjct: 124 TLTAQLVNALNMVDIRVLDHLIIGESEPVSLAEL 157


>gi|50119543|ref|YP_048710.1| putative DNA repair protein [Pectobacterium atrosepticum SCRI1043]
 gi|49610069|emb|CAG73509.1| putative DNA repair protein [Pectobacterium atrosepticum SCRI1043]
          Length = 137

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N LIA E    GTI+ V V+  E+V+R + L+A ++I  HNHPSGN  PS+AD 
Sbjct: 41  MFLNNQNRLIACEFLFAGTINSVEVHPHEVVRRAVLLNAAAVIFAHNHPSGNAEPSNADR 100

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L+ + + V DHII+G    VSF
Sbjct: 101 QITEKLTNALSLIEVRVLDHIIVGHGEIVSF 131


>gi|188990452|ref|YP_001902462.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167732212|emb|CAP50404.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris]
          Length = 159

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E    GTID   V+ R + +R LELSA ++IL HNHPSGNP PS+AD 
Sbjct: 63  LFLDTQHQVLTTEHLFTGTIDGCDVHPRVVARRALELSAAAVILFHNHPSGNPEPSEADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  L+I + DH++IG     S 
Sbjct: 123 KVTERLKQALGLLDIRLLDHLVIGGRQHTSL 153


>gi|254517357|ref|ZP_05129414.1| DNA repair protein RadC [gamma proteobacterium NOR5-3]
 gi|219674195|gb|EED30564.1| DNA repair protein RadC [gamma proteobacterium NOR5-3]
          Length = 177

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL   +  I+ E+Q RG+ID   VY R IV+RCLEL+A ++ILVHNHPSG   PS AD 
Sbjct: 81  LFLTAQHHAISFEIQFRGSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADR 140

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  +++ V DH+I+      SF
Sbjct: 141 QITVRLQRALELIDVRVVDHLIVSAGDATSF 171


>gi|267995990|gb|ACY90875.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
          Length = 279

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L    + S GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD
Sbjct: 183 IFLDAQHRVLQHSRLFS-GTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKAD 241

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +I     ++I V DH+IIG+  +VSF
Sbjct: 242 KLITERVIKCCQFMDIRVLDHLIIGRGEYVSF 273


>gi|303245835|ref|ZP_07332117.1| DNA repair protein RadC [Desulfovibrio fructosovorans JJ]
 gi|302492618|gb|EFL52486.1| DNA repair protein RadC [Desulfovibrio fructosovorans JJ]
          Length = 228

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 56/92 (60%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            +D  N LI  E  S+GT+D   VY RE++   L   A+ +ILVHNHPSG+P PS  D+ 
Sbjct: 133 LVDTKNRLIGWEQVSKGTVDQAAVYPREVLGVALRHKASGMILVHNHPSGDPRPSTEDVE 192

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            T+ I +    +++ + DH+++ ++ F SF+ 
Sbjct: 193 FTRRIKSAAREIDLRLLDHLVVTENRFFSFQA 224


>gi|213418639|ref|ZP_03351705.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 167

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L    + S GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD
Sbjct: 71  IFLDAQHRVLQHSRLFS-GTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKAD 129

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +I     ++I V DH+IIG+  +VSF
Sbjct: 130 KLITERVIKCCQFMDIRVLDHLIIGRGEYVSF 161


>gi|260220445|emb|CBA27989.1| DNA repair protein radC homolog [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 239

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V R L   A +++L HNHPSG+  PS AD 
Sbjct: 143 LFLDSQNKLLAMEELFRGTLTQTSVYPREVVIRALHHGAAAVVLAHNHPSGSVQPSRADE 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DHII+G    +S 
Sbjct: 203 ALTQTLKAALALVDVRVLDHIIVGPGQALSM 233


>gi|310643582|ref|YP_003948340.1| DNA repair protein radc [Paenibacillus polymyxa SC2]
 gi|309248532|gb|ADO58099.1| DNA repair protein RadC [Paenibacillus polymyxa SC2]
          Length = 230

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +IA E  S G+++   V+ RE+ +  ++ S+ SII  HNHPSG+P PS  D+
Sbjct: 134 LFLNTKNHVIAQETLSMGSLNSAIVHPREVFRAAIKCSSASIICAHNHPSGDPKPSPEDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++   N + I V DHI+IG   FVS K
Sbjct: 194 QLTRRLMEAGNIVGIDVLDHIVIGDGTFVSLK 225


>gi|331001793|ref|ZP_08325315.1| hypothetical protein HMPREF0491_00177 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412767|gb|EGG92150.1| hypothetical protein HMPREF0491_00177 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 229

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 65/97 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD     I+D V S GT++   V +REI+   L+  A ++IL+HNHPSG+P+PS ADI
Sbjct: 133 IFLDTKQKPISDMVISVGTVNASLVSVREILIESLKHLAVNVILLHNHPSGDPSPSKADI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T++I   L+ + I + DHI+IG + + SFK   II
Sbjct: 193 DITKDINKALDSIGIELVDHIVIGDNCYYSFKEQGII 229


>gi|308070402|ref|YP_003872007.1| DNA repair protein radC [Paenibacillus polymyxa E681]
 gi|305859681|gb|ADM71469.1| DNA repair protein radC [Paenibacillus polymyxa E681]
          Length = 230

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +IA E  S G+++   V+ RE+ +  ++ S+ SII  HNHPSG+P PS  D+
Sbjct: 134 LFLNTKNHVIAQETLSMGSLNSAIVHPREVFRAAIKCSSASIICAHNHPSGDPKPSPEDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++   N + I V DHI+IG   FVS K
Sbjct: 194 QLTRRLMEAGNIVGIDVLDHIVIGDGTFVSLK 225


>gi|238020847|ref|ZP_04601273.1| hypothetical protein GCWU000324_00742 [Kingella oralis ATCC 51147]
 gi|237867827|gb|EEP68833.1| hypothetical protein GCWU000324_00742 [Kingella oralis ATCC 51147]
          Length = 230

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD +N L+A E  +RGT+     Y REI +  L+  A ++I  HNHPSG+  PS AD 
Sbjct: 128 LFLDANNHLLAAEEIARGTLSESVAYPREIARFALQHHAAAVIFAHNHPSGSLKPSPADF 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             TQ +   L  L+I++ DHII+   A VSF
Sbjct: 188 AFTQRLHAALALLDIVLLDHIIVTAAATVSF 218


>gi|194445201|ref|YP_002042979.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|238693551|sp|B4SXE0|YICR_SALNS RecName: Full=UPF0758 protein yicR
 gi|194403864|gb|ACF64086.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
          Length = 221

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L    + S GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD
Sbjct: 125 IFLDAQHRVLQHSRLFS-GTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKAD 183

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +I     ++I V DH+IIG+  +VSF
Sbjct: 184 KLITERVIKCCQFMDIRVLDHLIIGRGEYVSF 215


>gi|260877938|ref|ZP_05890293.1| DNA repair protein [Vibrio parahaemolyticus AN-5034]
 gi|308089871|gb|EFO39566.1| DNA repair protein [Vibrio parahaemolyticus AN-5034]
          Length = 157

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 62/91 (68%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I  +   +GTID   VY RE+V+  LE++A ++IL HNHPSG+P+PS AD 
Sbjct: 62  LLLDNQHRVIEFKSLFKGTIDSASVYPREVVKSVLEVNAAAVILAHNHPSGDPSPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I  L  +++ V DHI++G+ + VSF
Sbjct: 122 RITRKLIDALALVDVRVLDHIVVGESS-VSF 151


>gi|238760452|ref|ZP_04621590.1| DNA repair protein radC [Yersinia aldovae ATCC 35236]
 gi|238701347|gb|EEP93926.1| DNA repair protein radC [Yersinia aldovae ATCC 35236]
          Length = 222

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT  +I   + L+I V DH+++G+   VSF
Sbjct: 186 LMTTQVIKACSLLDIRVLDHLVVGRGECVSF 216


>gi|261248877|emb|CBG26731.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
          Length = 221

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L    + S GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD
Sbjct: 125 IFLDAQHRVLQHSRLFS-GTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKAD 183

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +I     ++I V DH+IIG+  +VSF
Sbjct: 184 KLITERVIKCCQFMDIRVLDHLIIGRGEYVSF 215


>gi|261250535|ref|ZP_05943110.1| DNA repair protein RadC [Vibrio orientalis CIP 102891]
 gi|260939104|gb|EEX95091.1| DNA repair protein RadC [Vibrio orientalis CIP 102891]
          Length = 222

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GTID   VY RE+V+R LE +A ++IL HNHPSG   PS +D 
Sbjct: 126 LFLDNQHRVICGEPLFQGTIDAASVYPREVVKRSLEHNAAALILAHNHPSGVAEPSQSDR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I   L  ++I V DH ++G    VSF
Sbjct: 186 RITRRITDALALVDIRVLDHFVVGDGEIVSF 216


>gi|204928480|ref|ZP_03219679.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204321913|gb|EDZ07111.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 221

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L    + S GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD
Sbjct: 125 IFLDAQHRVLQHSRLFS-GTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKAD 183

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +I     ++I V DH+IIG+  +VSF
Sbjct: 184 KLITERVIKCCQFMDIRVLDHLIIGRGEYVSF 215


>gi|89902021|ref|YP_524492.1| DNA repair protein RadC [Rhodoferax ferrireducens T118]
 gi|122478527|sp|Q21TE2|Y3252_RHOFD RecName: Full=UPF0758 protein Rfer_3252
 gi|89346758|gb|ABD70961.1| DNA repair protein RadC [Rhodoferax ferrireducens T118]
          Length = 234

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V R L   A+S++L HNHPSG   PS AD 
Sbjct: 138 LFLDVQNRLLALEELFRGTLTQTSVYPREVVLRALHHQASSVVLAHNHPSGTVQPSRADE 197

Query: 61  NMTQNIITTLNPLNIIVHDHIII--GKDAFVSFKGL 94
            +TQ + TTL  +++ V DH+I+  G+   ++ +GL
Sbjct: 198 MLTQTLKTTLALIDVRVLDHVIVAPGEALSMAERGL 233


>gi|322835042|ref|YP_004215069.1| DNA repair protein RadC [Rahnella sp. Y9602]
 gi|321170243|gb|ADW75942.1| DNA repair protein RadC [Rahnella sp. Y9602]
          Length = 226

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTI HV VY REIV+  ++++A ++IL HNHPSG   PS  D 
Sbjct: 130 LFLDNQHRVIRHEEMFAGTIGHVEVYPREIVRGAMKVNAAALILAHNHPSGRAEPSLMDR 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II     L I V DH+++G    VSF
Sbjct: 190 KVTEQIIRACQLLEIRVLDHLVVGHGETVSF 220


>gi|294783990|ref|ZP_06749312.1| DNA repair protein RadC [Fusobacterium sp. 1_1_41FAA]
 gi|294479802|gb|EFG27581.1| DNA repair protein RadC [Fusobacterium sp. 1_1_41FAA]
          Length = 236

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +IA E  S GT+D   +Y REI +R +  +A SII+ HNHPSGN  PS  DI
Sbjct: 140 IYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNTCPSKCDI 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T  I   L     ++ +HIII +D++ SF
Sbjct: 200 DITNEIAKGLKNFGALLLEHIIITRDSYFSF 230


>gi|158522926|ref|YP_001530796.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3]
 gi|158511752|gb|ABW68719.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3]
          Length = 167

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N ++A E    G++    VY REI++R + L ++++++ HNHP+G+P PS  D 
Sbjct: 55  LYLDTKNRILAMEKMFTGSLSSTAVYPREIIKRVIALKSSAVVITHNHPTGDPGPSVEDT 114

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++  L  +N+ +HDHII+G + + SF    +I
Sbjct: 115 RITIRLLVALKSMNVDLHDHIIVG-EGYYSFADAGVI 150


>gi|326625474|gb|EGE31819.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 221

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L    + S GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD
Sbjct: 125 IFLDAQHRVLQHSRLFS-GTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKAD 183

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +I     ++I V DH+IIG+  +VSF
Sbjct: 184 KLITERVIKCCQFMDIRVLDHLIIGRGEYVSF 215


>gi|254522631|ref|ZP_05134686.1| DNA repair protein RadC [Stenotrophomonas sp. SKA14]
 gi|313107555|ref|ZP_07793740.1| hypothetical protein PA39016_001030004 [Pseudomonas aeruginosa
           39016]
 gi|219720222|gb|EED38747.1| DNA repair protein RadC [Stenotrophomonas sp. SKA14]
 gi|310880242|gb|EFQ38836.1| hypothetical protein PA39016_001030004 [Pseudomonas aeruginosa
           39016]
          Length = 164

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINSTSVYPRVVVQRVLELKAAAVVFAHQHPSGISEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DHII+G+ A  SF
Sbjct: 128 MLTQQLQAALALIDVRVLDHIIVGQGAPFSF 158


>gi|238916926|ref|YP_002930443.1| DNA repair protein RadC [Eubacterium eligens ATCC 27750]
 gi|238872286|gb|ACR71996.1| DNA repair protein RadC [Eubacterium eligens ATCC 27750]
          Length = 230

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    LI D+V S GT     V +REI +  L+  A S++L+HNHPSGNP+PS  D+
Sbjct: 133 VMLDNRCRLIRDKVLSVGTSTGSMVSVREIFKEALDNRAASVVLLHNHPSGNPSPSREDM 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++++     + I + DHI+IG +++ SFK ++ I
Sbjct: 193 KVTRSVMEAGKIIGIELLDHIVIGDNSYFSFKQMQYI 229


>gi|91786850|ref|YP_547802.1| DNA repair protein RadC [Polaromonas sp. JS666]
 gi|91696075|gb|ABE42904.1| DNA replication and repair protein RadC [Polaromonas sp. JS666]
          Length = 244

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGT+    VY RE+V R L L+A S++L HNHPSG   PS AD 
Sbjct: 148 LFLDSQHRLIALEELFRGTLTQTSVYPREVVVRALALNAASVVLAHNHPSGAATPSRADE 207

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + + L  +++ V DH ++     VS   L ++
Sbjct: 208 ALTQTLKSALALVDVRVLDHFVVTSTQAVSMAELGLL 244


>gi|330807440|ref|YP_004351902.1| Putative DNA repair protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375548|gb|AEA66898.1| Putative DNA repair protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 165

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGT+D   VY RE+V+  LE +A ++ILVHNHPSG+P PS AD 
Sbjct: 69  LMLDAKHRVIGFRELFRGTLDGASVYPREVVKIALEHNAAAVILVHNHPSGDPEPSQADY 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   LN +   + DH+++G D  VS 
Sbjct: 129 ALTTTLKNALNMVGTRILDHVVVGHDGCVSL 159


>gi|56415619|ref|YP_152694.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197364546|ref|YP_002144183.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|73913739|sp|Q5PC30|YICR_SALPA RecName: Full=UPF0758 protein yicR
 gi|238690754|sp|B5BI12|YICR_SALPK RecName: Full=UPF0758 protein yicR
 gi|56129876|gb|AAV79382.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197096023|emb|CAR61610.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 221

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L    + S GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD
Sbjct: 125 IFLDVQHRVLQHSRLFS-GTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKAD 183

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +I     ++I V DH+IIG+  +VSF
Sbjct: 184 KLITERVIKCCQFMDIRVLDHLIIGRGEYVSF 215


>gi|16762580|ref|NP_458197.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16767014|ref|NP_462629.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29144069|ref|NP_807411.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62182222|ref|YP_218639.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|167549023|ref|ZP_02342782.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168235334|ref|ZP_02660392.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168241908|ref|ZP_02666840.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168260517|ref|ZP_02682490.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168464963|ref|ZP_02698855.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168818441|ref|ZP_02830441.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194447446|ref|YP_002047761.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194471766|ref|ZP_03077750.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194738096|ref|YP_002116664.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251672|ref|YP_002148661.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197264351|ref|ZP_03164425.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|198244011|ref|YP_002217690.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200388196|ref|ZP_03214808.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205354669|ref|YP_002228470.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858966|ref|YP_002245617.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213161281|ref|ZP_03346991.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213582558|ref|ZP_03364384.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213615654|ref|ZP_03371480.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213647926|ref|ZP_03377979.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213855129|ref|ZP_03383369.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|224585529|ref|YP_002639328.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238910236|ref|ZP_04654073.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289809998|ref|ZP_06540627.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
 gi|289824121|ref|ZP_06543718.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|54039003|sp|P65961|YICR_SALTI RecName: Full=UPF0758 protein yicR
 gi|54041784|sp|P65960|YICR_SALTY RecName: Full=UPF0758 protein yicR
 gi|73913738|sp|Q57IA4|YICR_SALCH RecName: Full=UPF0758 protein yicR
 gi|238689782|sp|B4TZY0|YICR_SALSV RecName: Full=UPF0758 protein yicR
 gi|238689997|sp|B5EXE3|YICR_SALA4 RecName: Full=UPF0758 protein yicR
 gi|238690228|sp|B4T9C3|YICR_SALHS RecName: Full=UPF0758 protein yicR
 gi|238690333|sp|B5FM62|YICR_SALDC RecName: Full=UPF0758 protein yicR
 gi|238690466|sp|B5R5G2|YICR_SALEP RecName: Full=UPF0758 protein yicR
 gi|238690538|sp|B5RGE9|YICR_SALG2 RecName: Full=UPF0758 protein yicR
 gi|254789657|sp|C0Q1X1|YICR_SALPC RecName: Full=UPF0758 protein yicR
 gi|25322100|pir||AD0971 probable DNA repair protein radC [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16422297|gb|AAL22588.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16504885|emb|CAD03264.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139706|gb|AAO71271.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62129855|gb|AAX67558.1| putative DNA repair protein, associated with replication forks
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|194405750|gb|ACF65969.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194458130|gb|EDX46969.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194713598|gb|ACF92819.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195632438|gb|EDX50922.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197215375|gb|ACH52772.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197242606|gb|EDY25226.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197291464|gb|EDY30816.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197938527|gb|ACH75860.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199605294|gb|EDZ03839.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205274450|emb|CAR39482.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205325640|gb|EDZ13479.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205338909|gb|EDZ25673.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205344387|gb|EDZ31151.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205350173|gb|EDZ36804.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206710769|emb|CAR35130.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224470057|gb|ACN47887.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|301160266|emb|CBW19789.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914755|dbj|BAJ38729.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320088149|emb|CBY97911.1| DNA repair protein radC homolog [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321226782|gb|EFX51832.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322612895|gb|EFY09847.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618960|gb|EFY15847.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625263|gb|EFY22090.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322630070|gb|EFY26843.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322634261|gb|EFY30996.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635838|gb|EFY32547.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322643024|gb|EFY39601.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322645048|gb|EFY41579.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649852|gb|EFY46275.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653059|gb|EFY49394.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322661122|gb|EFY57350.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662389|gb|EFY58602.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322667267|gb|EFY63433.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674356|gb|EFY70449.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322678436|gb|EFY74497.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322680942|gb|EFY76976.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687122|gb|EFY83095.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322716710|gb|EFZ08281.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323132089|gb|ADX19519.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323195846|gb|EFZ81018.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198237|gb|EFZ83343.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323200855|gb|EFZ85925.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323206609|gb|EFZ91567.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210478|gb|EFZ95364.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216234|gb|EGA00962.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323220457|gb|EGA04911.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225320|gb|EGA09554.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323228434|gb|EGA12565.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323234255|gb|EGA18343.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323237240|gb|EGA21307.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244759|gb|EGA28763.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323245866|gb|EGA29856.1| hypothetical protein SEEM9199_16688 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323250951|gb|EGA34827.1| hypothetical protein SEEM8282_21207 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323257301|gb|EGA41000.1| hypothetical protein SEEM8283_22649 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262225|gb|EGA45786.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264564|gb|EGA48068.1| hypothetical protein SEEM8285_13785 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323268854|gb|EGA52312.1| hypothetical protein SEEM8287_17174 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326629808|gb|EGE36151.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 221

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L    + S GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD
Sbjct: 125 IFLDAQHRVLQHSRLFS-GTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKAD 183

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +I     ++I V DH+IIG+  +VSF
Sbjct: 184 KLITERVIKCCQFMDIRVLDHLIIGRGEYVSF 215


>gi|88705880|ref|ZP_01103589.1| radC-like protein yeeS [Congregibacter litoralis KT71]
 gi|88699951|gb|EAQ97061.1| radC-like protein yeeS [Congregibacter litoralis KT71]
          Length = 169

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A ++I  HNHPSGNP PS AD 
Sbjct: 73  LFLDSQHRLIEYTEMFRGTIDSASVYPREVVKEALRLNAAAVIFSHNHPSGNPEPSRADE 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L  +++   DH+I+      SF  +GL
Sbjct: 133 AITKRLKEALALVDVRTLDHVIVAGSDTTSFAERGL 168


>gi|300721251|ref|YP_003710521.1| hypothetical protein XNC1_0176 [Xenorhabdus nematophila ATCC 19061]
 gi|297627738|emb|CBJ88264.1| putative associated with replication fork, DNA repair protein
           [Xenorhabdus nematophila ATCC 19061]
          Length = 230

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L   N +I  +   +GTI+ V ++ REIV+  ++++A SIIL HNHPSGNP PS AD 
Sbjct: 134 LCLTNQNKVICHDEMFKGTINKVEIHPREIVKLAVKVNAASIILAHNHPSGNPEPSLADK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II   + + + V DHI+IGK   VSF
Sbjct: 194 VVTEKIIEACDLVGVKVLDHIVIGKQYCVSF 224


>gi|37528674|ref|NP_932019.1| DNA repair protein RadC [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|54036232|sp|Q7MY28|Y4865_PHOLL RecName: Full=UPF0758 protein plu4865
 gi|36788113|emb|CAE17237.1| DNA repair protein [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 230

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  E   +GTI+ V V+ REIV+  ++++A+S+IL HNHPSG+  PS AD 
Sbjct: 134 LFLNNQNRVICHEEMFKGTINKVEVHPREIVRSAIKVNASSVILAHNHPSGHAEPSLADK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +I   N + + V DH++IG+   VSF
Sbjct: 194 IVTDKVIDACNLVGVKVLDHLVIGRQCCVSF 224


>gi|154246894|ref|YP_001417852.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2]
 gi|154160979|gb|ABS68195.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2]
          Length = 106

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 5/94 (5%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D HN     + QSR    H+  ++ +++    +    S  ++HNHPSG+P PS ADI+MT
Sbjct: 18  DHHNSAPNADPQSR---HHLWNHLEKML--AFQYDKASRRMMHNHPSGDPTPSRADIDMT 72

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + II    PL I VHDHII+GKD   S KGLR+I
Sbjct: 73  RKIIDVAKPLGIEVHDHIIVGKDGHASLKGLRLI 106


>gi|238790648|ref|ZP_04634412.1| DNA repair protein RadC [Yersinia frederiksenii ATCC 33641]
 gi|238721253|gb|EEQ12929.1| DNA repair protein RadC [Yersinia frederiksenii ATCC 33641]
          Length = 194

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + LI  E  S GT++   VY REIV+  L  +  ++IL HNHPSG P PS+ D 
Sbjct: 98  MHLDNQHRLIHCETASLGTLNQTAVYPREIVKTALYHNTAAVILAHNHPSGIPEPSNYDR 157

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT  + T LN +++ V DHI++G+ A VSF
Sbjct: 158 QMTDRVRTALNLIDVKVLDHIVLGQGAQVSF 188


>gi|238750954|ref|ZP_04612451.1| radC-like protein yeeS [Yersinia rohdei ATCC 43380]
 gi|238710868|gb|EEQ03089.1| radC-like protein yeeS [Yersinia rohdei ATCC 43380]
          Length = 159

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N L+A E    GTI H  V+ RE+V+R L  +A ++I  HNHPSG   PS AD 
Sbjct: 63  LYLNNQNQLLAHETLFTGTISHTEVHPREVVKRALYFNAAAVIFAHNHPSGEVAPSQADK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ ++  L  + I V DH+I+G     SF
Sbjct: 123 AITQRLVQALMLVEIRVPDHLIVGGRQIFSF 153


>gi|260888418|ref|ZP_05899681.1| DNA repair protein RadC [Selenomonas sputigena ATCC 35185]
 gi|330838268|ref|YP_004412848.1| DNA repair protein RadC [Selenomonas sputigena ATCC 35185]
 gi|260861954|gb|EEX76454.1| DNA repair protein RadC [Selenomonas sputigena ATCC 35185]
 gi|329746032|gb|AEB99388.1| DNA repair protein RadC [Selenomonas sputigena ATCC 35185]
          Length = 229

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N ++A +  S GT+    V+ RE+ Q  +E SA ++ILVHNHPSG+P PS  DI
Sbjct: 132 LLLNAKNHILALKTISVGTLTSSVVHPREVFQAAIEQSAAAVILVHNHPSGDPAPSGEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++     ++I V DH+I+G D F+S K
Sbjct: 192 AVTRRMVEAGEIMDIPVLDHVIVGYDKFISLK 223


>gi|329896524|ref|ZP_08271582.1| DNA repair protein RadC [gamma proteobacterium IMCC3088]
 gi|328921741|gb|EGG29114.1| DNA repair protein RadC [gamma proteobacterium IMCC3088]
          Length = 210

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N ++  +    GT+D   VY REIV   L++ A +II+ HNHPSG+  PSDAD 
Sbjct: 114 LYLDVRNQVLKVDTLFSGTVDAASVYPREIVSTALQVGAVNIIIAHNHPSGSSQPSDADH 173

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  ++I + DH+++G+  F SF
Sbjct: 174 RVTEKVRQALGLVDICLLDHLVLGQGEFFSF 204


>gi|121593658|ref|YP_985554.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|121593791|ref|YP_985687.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|120605738|gb|ABM41478.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|120605871|gb|ABM41611.1| DNA repair protein RadC [Acidovorax sp. JS42]
          Length = 164

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL+A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINSTSVYPRVVVQRVLELNAAAVVFAHQHPSGITEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DHIIIG+ A  SF
Sbjct: 128 MLTQQLQAALALIDVRVLDHIIIGQGAPFSF 158


>gi|290488|gb|AAA61991.1| differs from radC sequence in X63366; similar to S. aureus putative
           25 kD protein [Escherichia coli]
          Length = 224

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 218


>gi|322515256|ref|ZP_08068254.1| DNA repair protein RadC [Actinobacillus ureae ATCC 25976]
 gi|322118761|gb|EFX90967.1| DNA repair protein RadC [Actinobacillus ureae ATCC 25976]
          Length = 224

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI  E    GTI+   VY REI++  L+ +A +II+ HNHPSG+  PS++D 
Sbjct: 124 MFLDNQNRLIKKEKMFYGTINQATVYPREIIKEALKCNAAAIIVAHNHPSGHCTPSESDR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ I    + + I   DHI++GK  + SF+
Sbjct: 184 ILTKKIEMACDLVEIRFVDHIVVGKGDYFSFE 215


>gi|170766630|ref|ZP_02901083.1| DNA repair protein RadC [Escherichia albertii TW07627]
 gi|170124068|gb|EDS92999.1| DNA repair protein RadC [Escherichia albertii TW07627]
          Length = 250

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L    + S GT++HV V+ REIV+  ++++A+++IL HNHPSG   PS AD
Sbjct: 126 IFLDSQHRVLTHSRLFS-GTLNHVEVHPREIVREAIKINASALILAHNHPSGCAEPSKAD 184

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ II +   + + V DHI+IG+  +VSF
Sbjct: 185 KLITERIIKSCQFMELRVLDHIVIGRGEYVSF 216


>gi|170293827|gb|ACB12963.1| RadC [Aquabacterium sp. PL1F5]
          Length = 198

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD   +LI  E   RGT+    VY RE+V+  L  +A +++L HNHPSG  +PS AD 
Sbjct: 102 LYLDAQQVLIEAEELFRGTLTQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADE 161

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ + ++L  +++ V DH I+G D  +SF
Sbjct: 162 LLTQTLKSSLMMVDVRVLDHFIVGGDRVLSF 192


>gi|325479032|gb|EGC82133.1| DNA repair protein RadC [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 227

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N++I+ E  S G +    V  RE+ +  ++ SA S+IL+HNHPSGNP PS  D 
Sbjct: 131 ILLDSKNVIISTETISVGDLSSTIVNPREVFKPAIKKSAKSVILIHNHPSGNPAPSMEDY 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ +    + L+I V DHIIIG+D F SFK
Sbjct: 191 HITKRLKEAGDILDIGVLDHIIIGRDDFYSFK 222


>gi|251791518|ref|YP_003006239.1| DNA repair protein RadC [Dickeya zeae Ech1591]
 gi|247540139|gb|ACT08760.1| DNA repair protein RadC [Dickeya zeae Ech1591]
          Length = 221

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  +    GTI  V V+ REIV+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 125 MFLDNQHRVIRHQEMFAGTISSVEVHPREIVREALRANAAALILAHNHPSGRAEPSKADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T  I+     L+I V DH++IG+  +VSF
Sbjct: 185 SITGKIVQACQLLDIRVLDHLVIGRGEYVSF 215


>gi|161505736|ref|YP_001572848.1| DNA repair protein RadC [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189029401|sp|A9MKN7|YICR_SALAR RecName: Full=UPF0758 protein yicR
 gi|160867083|gb|ABX23706.1| hypothetical protein SARI_03912 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 221

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 62/92 (67%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L    + S GT+ HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD
Sbjct: 125 IFLDAQHRVLQHSRLFS-GTLSHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKAD 183

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            ++T  +I     ++I V DH+IIG+  +VSF
Sbjct: 184 KHITDRVIKCCQFMDIRVLDHLIIGRGEYVSF 215


>gi|59710733|ref|YP_203509.1| DNA repair protein RadC [Vibrio fischeri ES114]
 gi|71648820|sp|Q5E8M5|Y126_VIBF1 RecName: Full=UPF0758 protein VF_0126
 gi|59478834|gb|AAW84621.1| protein associated with replication fork, possible DNA repair
           protein [Vibrio fischeri ES114]
          Length = 224

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+   GTID   VY RE+V+R ++ +A +IIL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVLKGEILFEGTIDVAAVYPREVVKRSIDYNAAAIILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I   +  ++I V DH +IG    VSF
Sbjct: 188 RITKRISDAVELVDIRVLDHFVIGDGEIVSF 218


>gi|285017189|ref|YP_003374900.1| DNA repair protein radc [Xanthomonas albilineans GPE PC73]
 gi|283472407|emb|CBA14912.1| probable dna repair protein radc [Xanthomonas albilineans]
          Length = 224

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E   +GT+D   V+ RE+V+R L L+A +II+ HNHPSGNP PS AD 
Sbjct: 128 LFLDTRHRWLAFEELFQGTVDWTEVHPREVVRRALTLNAAAIIIGHNHPSGNPEPSSADF 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L+ +++ + DH IIG    +S 
Sbjct: 188 AVTERLRKALDLIDVRLLDHFIIGDGMPISL 218


>gi|300927932|ref|ZP_07143491.1| DNA repair protein RadC [Escherichia coli MS 187-1]
 gi|300464024|gb|EFK27517.1| DNA repair protein RadC [Escherichia coli MS 187-1]
          Length = 224

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGKYVSF 218


>gi|238750801|ref|ZP_04612299.1| DNA repair protein radC [Yersinia rohdei ATCC 43380]
 gi|238710945|gb|EEQ03165.1| DNA repair protein radC [Yersinia rohdei ATCC 43380]
          Length = 235

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 139 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT  ++   + L+I V DH+++G+   VSF
Sbjct: 199 LMTTQVVKACSLLDIRVLDHLVVGRGECVSF 229


>gi|282600469|ref|ZP_05974415.2| DNA repair protein RadC [Providencia rustigianii DSM 4541]
 gi|282565170|gb|EFB70705.1| DNA repair protein RadC [Providencia rustigianii DSM 4541]
          Length = 234

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +I  E   +GT++ V V+ REI++  ++++A+SIIL HNHPSGNP PS AD 
Sbjct: 138 IFLNNQNQIICHEEMFKGTVNRVEVHPREILRFAMKMNASSIILAHNHPSGNPEPSIADK 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I +  + + I + DH ++G    VSF
Sbjct: 198 QVTERIHSACSIMGIKLLDHFVVGHKHCVSF 228


>gi|89110373|ref|AP_004153.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli str. K-12 substr. W3110]
 gi|162135914|ref|NP_418095.4| conserved protein, UPF0758 family; not radC [Escherichia coli str.
           K-12 substr. MG1655]
 gi|170083146|ref|YP_001732466.1| protein associated with replication fork, DNA repair protein
           [Escherichia coli str. K-12 substr. DH10B]
 gi|238902729|ref|YP_002928525.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli BW2952]
 gi|6686314|sp|P25531|YICR_ECOLI RecName: Full=UPF0758 protein yicR
 gi|229485552|sp|B1X972|YICR_ECODH RecName: Full=UPF0758 protein yicR
 gi|259551860|sp|C4ZXN0|YICR_ECOBW RecName: Full=UPF0758 protein yicR
 gi|85676404|dbj|BAE77654.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli str. K12 substr. W3110]
 gi|87082300|gb|AAC76662.2| conserved protein, UPF0758 family; not radC [Escherichia coli str.
           K-12 substr. MG1655]
 gi|169890981|gb|ACB04688.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|238863294|gb|ACR65292.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli BW2952]
 gi|260447343|gb|ACX37765.1| DNA repair protein RadC [Escherichia coli DH1]
 gi|315138220|dbj|BAJ45379.1| DNA repair protein RadC [Escherichia coli DH1]
          Length = 222

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|213029140|ref|ZP_03343587.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 129

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L    + S GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD
Sbjct: 33  IFLDAQHRVLQHSRLFS-GTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKAD 91

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +I     ++I V DH+IIG+  +VSF
Sbjct: 92  KLITERVIKCCQFMDIRVLDHLIIGRGEYVSF 123


>gi|253771521|ref|YP_003034352.1| DNA repair protein RadC [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254163566|ref|YP_003046674.1| DNA repair protein RadC [Escherichia coli B str. REL606]
 gi|297521446|ref|ZP_06939832.1| DNA repair protein RadC [Escherichia coli OP50]
 gi|242379162|emb|CAQ33964.1| hypothetical protein B21_03447 [Escherichia coli BL21(DE3)]
 gi|253322565|gb|ACT27167.1| DNA repair protein RadC [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975467|gb|ACT41138.1| DNA repair protein RadC [Escherichia coli B str. REL606]
 gi|253979623|gb|ACT45293.1| DNA repair protein RadC [Escherichia coli BL21(DE3)]
          Length = 222

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGKYVSF 216


>gi|152983064|ref|YP_001352677.1| DNA repair protein RadC [Janthinobacterium sp. Marseille]
 gi|151283141|gb|ABR91551.1| DNA repair protein RadC [Janthinobacterium sp. Marseille]
          Length = 190

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  + ++A E    GTI    VY R IVQR + L+A S+IL HNHPSG+ +PS+AD 
Sbjct: 93  VFMDTQHRVLAYEPLFFGTIHQTSVYPRAIVQRAMSLNAASMILAHNHPSGSTHPSEADK 152

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  + + L  +++ V DH IIG++   SF
Sbjct: 153 QLTNRLKSLLESIDVRVLDHFIIGEEGTFSF 183


>gi|110807685|ref|YP_691205.1| DNA repair protein RadC [Shigella flexneri 5 str. 8401]
 gi|110617233|gb|ABF05900.1| DNA repair protein [Shigella flexneri 5 str. 8401]
          Length = 209

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 113 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 172

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 173 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 203


>gi|46447399|ref|YP_008764.1| putative DNA repair protein radC [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|81697594|sp|Q6MAB0|Y1765_PARUW RecName: Full=UPF0758 protein pc1765
 gi|46401040|emb|CAF24489.1| putative DNA repair protein radC [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 231

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F D    LI  EV S G++    V+ RE+    +   A S+I+VHNHPSG+P PS+ D+
Sbjct: 133 IFQDTKGYLITYEVISIGSLSQTLVHPREVFYSAIRHKAASLIVVHNHPSGDPMPSNQDL 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +TQ ++     L I + DH+IIGK+++VSFK
Sbjct: 193 KLTQILLEGSRLLGIPLRDHLIIGKNSYVSFK 224


>gi|332112547|gb|EGJ12340.1| hypothetical protein RBXJA2T_18503 [Rubrivivax benzoatilyticus JA2]
          Length = 225

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GT+    VY RE+ +R L L+A ++IL HNHPSG   PS AD 
Sbjct: 129 LFLDSQHRLIVMEEMFHGTLTQTSVYPREVARRALALNAGAVILAHNHPSGVAEPSRADE 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  L++ V DH+++G+   VS 
Sbjct: 189 FLTQTLRQALQLLDVRVLDHLVVGRGQVVSM 219


>gi|260870368|ref|YP_003236770.1| protein associated with replication fork [Escherichia coli O111:H-
           str. 11128]
 gi|257766724|dbj|BAI38219.1| protein associated with replication fork [Escherichia coli O111:H-
           str. 11128]
          Length = 222

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|188495548|ref|ZP_03002818.1| DNA repair protein RadC [Escherichia coli 53638]
 gi|188490747|gb|EDU65850.1| DNA repair protein RadC [Escherichia coli 53638]
          Length = 222

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|113460290|ref|YP_718349.1| DNA repair protein RadC [Haemophilus somnus 129PT]
 gi|170719078|ref|YP_001783364.1| DNA repair protein RadC [Haemophilus somnus 2336]
 gi|123031084|sp|Q0I0X9|Y144_HAES1 RecName: Full=UPF0758 protein HS_0144
 gi|189029396|sp|B0UUW7|Y009_HAES2 RecName: Full=UPF0758 protein HSM_0009
 gi|112822333|gb|ABI24422.1| DNA repair protein [Haemophilus somnus 129PT]
 gi|168827207|gb|ACA32578.1| DNA repair protein RadC [Haemophilus somnus 2336]
          Length = 222

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS AD 
Sbjct: 126 LFLDNQHRLIKKEEMFLGTINQANVYPREIIKTALFCNAAALILAHNHPSGVSTPSMADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT+NI      + I V DH IIGK  + SF
Sbjct: 186 KMTENIKQLSELMEIRVLDHFIIGKGNYFSF 216


>gi|257066807|ref|YP_003153063.1| DNA repair protein RadC [Anaerococcus prevotii DSM 20548]
 gi|256798687|gb|ACV29342.1| DNA repair protein RadC [Anaerococcus prevotii DSM 20548]
          Length = 228

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N++IA EV S G +    V  RE+ +  ++ SA S+ILVHNHPSGNP PS  D 
Sbjct: 132 ILLDSKNVIIAKEVISIGDLGSTVVNPREVFKPAIKKSAKSMILVHNHPSGNPKPSTEDF 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T  +    + L+I V DHI+IG  ++ SFK
Sbjct: 192 LITDRLAEAGDILDIKVLDHIVIGNSSYYSFK 223


>gi|209921109|ref|YP_002295193.1| DNA repair protein RadC [Escherichia coli SE11]
 gi|300815123|ref|ZP_07095348.1| DNA repair protein RadC [Escherichia coli MS 107-1]
 gi|209914368|dbj|BAG79442.1| DNA repair protein [Escherichia coli SE11]
 gi|300532015|gb|EFK53077.1| DNA repair protein RadC [Escherichia coli MS 107-1]
          Length = 224

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 218


>gi|323179392|gb|EFZ64959.1| DNA repair protein radC [Escherichia coli 1180]
          Length = 224

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 218


>gi|300919795|ref|ZP_07136270.1| DNA repair protein RadC [Escherichia coli MS 115-1]
 gi|300413148|gb|EFJ96458.1| DNA repair protein RadC [Escherichia coli MS 115-1]
          Length = 224

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 218


>gi|193070384|ref|ZP_03051326.1| DNA repair protein RadC [Escherichia coli E110019]
 gi|192956323|gb|EDV86784.1| DNA repair protein RadC [Escherichia coli E110019]
          Length = 222

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|110643879|ref|YP_671609.1| DNA repair protein RadC [Escherichia coli 536]
 gi|170018132|ref|YP_001723086.1| DNA repair protein RadC [Escherichia coli ATCC 8739]
 gi|110345471|gb|ABG71708.1| DNA repair protein RadC [Escherichia coli 536]
 gi|169753060|gb|ACA75759.1| DNA repair protein RadC [Escherichia coli ATCC 8739]
 gi|307555737|gb|ADN48512.1| DNA repair protein [Escherichia coli ABU 83972]
          Length = 214

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 118 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 178 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 208


>gi|293413072|ref|ZP_06655740.1| radC [Escherichia coli B354]
 gi|291468719|gb|EFF11212.1| radC [Escherichia coli B354]
          Length = 224

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 218


>gi|293417099|ref|ZP_06659726.1| DNA repair protein RadC [Escherichia coli B185]
 gi|291431130|gb|EFF04123.1| DNA repair protein RadC [Escherichia coli B185]
          Length = 224

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 218


>gi|194431265|ref|ZP_03063558.1| DNA repair protein RadC [Shigella dysenteriae 1012]
 gi|194420720|gb|EDX36796.1| DNA repair protein RadC [Shigella dysenteriae 1012]
 gi|332084498|gb|EGI89693.1| DNA repair protein radC [Shigella dysenteriae 155-74]
          Length = 222

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|82546001|ref|YP_409948.1| DNA repair protein RadC [Shigella boydii Sb227]
 gi|293463962|ref|ZP_06664376.1| DNA repair protein RadC [Escherichia coli B088]
 gi|300822408|ref|ZP_07102548.1| DNA repair protein RadC [Escherichia coli MS 119-7]
 gi|301325320|ref|ZP_07218827.1| DNA repair protein RadC [Escherichia coli MS 78-1]
 gi|301644304|ref|ZP_07244306.1| DNA repair protein RadC [Escherichia coli MS 146-1]
 gi|331644356|ref|ZP_08345485.1| DNA repair protein RadC [Escherichia coli H736]
 gi|331655270|ref|ZP_08356269.1| DNA repair protein RadC [Escherichia coli M718]
 gi|331675118|ref|ZP_08375875.1| DNA repair protein RadC [Escherichia coli TA280]
 gi|331679729|ref|ZP_08380399.1| DNA repair protein RadC [Escherichia coli H591]
 gi|81247412|gb|ABB68120.1| DNA repair protein [Shigella boydii Sb227]
 gi|291321594|gb|EFE61030.1| DNA repair protein RadC [Escherichia coli B088]
 gi|300525055|gb|EFK46124.1| DNA repair protein RadC [Escherichia coli MS 119-7]
 gi|300847847|gb|EFK75607.1| DNA repair protein RadC [Escherichia coli MS 78-1]
 gi|301077342|gb|EFK92148.1| DNA repair protein RadC [Escherichia coli MS 146-1]
 gi|315618659|gb|EFU99245.1| DNA repair protein radC [Escherichia coli 3431]
 gi|323160754|gb|EFZ46690.1| DNA repair protein radC [Escherichia coli E128010]
 gi|331036650|gb|EGI08876.1| DNA repair protein RadC [Escherichia coli H736]
 gi|331047285|gb|EGI19363.1| DNA repair protein RadC [Escherichia coli M718]
 gi|331068027|gb|EGI39425.1| DNA repair protein RadC [Escherichia coli TA280]
 gi|331072901|gb|EGI44226.1| DNA repair protein RadC [Escherichia coli H591]
 gi|332089352|gb|EGI94456.1| DNA repair protein radC [Shigella boydii 3594-74]
 gi|332104944|gb|EGJ08290.1| DNA repair protein RadC [Shigella sp. D9]
          Length = 224

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 218


>gi|330909700|gb|EGH38214.1| DNA repair protein RadC [Escherichia coli AA86]
          Length = 226

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 130 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 190 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 220


>gi|157163119|ref|YP_001460437.1| DNA repair protein RadC [Escherichia coli HS]
 gi|166918666|sp|A8A6A0|YICR_ECOHS RecName: Full=UPF0758 protein yicR
 gi|157068799|gb|ABV08054.1| DNA repair protein RadC [Escherichia coli HS]
          Length = 222

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|15804179|ref|NP_290218.1| DNA repair protein RadC [Escherichia coli O157:H7 EDL933]
 gi|15833767|ref|NP_312540.1| DNA repair protein RadC [Escherichia coli O157:H7 str. Sakai]
 gi|26250284|ref|NP_756324.1| DNA repair protein RadC [Escherichia coli CFT073]
 gi|91213155|ref|YP_543141.1| DNA repair protein RadC [Escherichia coli UTI89]
 gi|117625910|ref|YP_859233.1| DNA repair protein RadC [Escherichia coli APEC O1]
 gi|161485825|ref|NP_709417.3| DNA repair protein RadC [Shigella flexneri 2a str. 301]
 gi|161486390|ref|NP_839257.2| DNA repair protein RadC [Shigella flexneri 2a str. 2457T]
 gi|227883806|ref|ZP_04001611.1| DNA repair protein RadC [Escherichia coli 83972]
 gi|237703409|ref|ZP_04533890.1| DNA repair protein radC [Escherichia sp. 3_2_53FAA]
 gi|254038838|ref|ZP_04872890.1| DNA repair protein radC [Escherichia sp. 1_1_43]
 gi|291285009|ref|YP_003501827.1| DNA repair protein [Escherichia coli O55:H7 str. CB9615]
 gi|300898572|ref|ZP_07116903.1| DNA repair protein RadC [Escherichia coli MS 198-1]
 gi|300907679|ref|ZP_07125307.1| DNA repair protein RadC [Escherichia coli MS 84-1]
 gi|300939237|ref|ZP_07153917.1| DNA repair protein RadC [Escherichia coli MS 21-1]
 gi|300983482|ref|ZP_07176629.1| DNA repair protein RadC [Escherichia coli MS 200-1]
 gi|300984962|ref|ZP_07177214.1| DNA repair protein RadC [Escherichia coli MS 45-1]
 gi|301018967|ref|ZP_07183190.1| DNA repair protein RadC [Escherichia coli MS 69-1]
 gi|301047427|ref|ZP_07194507.1| DNA repair protein RadC [Escherichia coli MS 185-1]
 gi|301303871|ref|ZP_07209990.1| DNA repair protein RadC [Escherichia coli MS 124-1]
 gi|309797621|ref|ZP_07692009.1| DNA repair protein RadC [Escherichia coli MS 145-7]
 gi|312972077|ref|ZP_07786251.1| DNA repair protein radC [Escherichia coli 1827-70]
 gi|331649453|ref|ZP_08350539.1| DNA repair protein RadC [Escherichia coli M605]
 gi|12518394|gb|AAG58782.1|AE005591_6 DNA repair protein [Escherichia coli O157:H7 str. EDL933]
 gi|26110714|gb|AAN82898.1|AE016769_13 DNA repair protein radC [Escherichia coli CFT073]
 gi|13363988|dbj|BAB37936.1| DNA repair protein [Escherichia coli O157:H7 str. Sakai]
 gi|91074729|gb|ABE09610.1| DNA repair protein [Escherichia coli UTI89]
 gi|115515034|gb|ABJ03109.1| DNA repair protein RadC [Escherichia coli APEC O1]
 gi|209754638|gb|ACI75631.1| DNA repair protein [Escherichia coli]
 gi|209754640|gb|ACI75632.1| DNA repair protein [Escherichia coli]
 gi|209754642|gb|ACI75633.1| DNA repair protein [Escherichia coli]
 gi|209754644|gb|ACI75634.1| DNA repair protein [Escherichia coli]
 gi|209754646|gb|ACI75635.1| DNA repair protein [Escherichia coli]
 gi|226838803|gb|EEH70830.1| DNA repair protein radC [Escherichia sp. 1_1_43]
 gi|226902673|gb|EEH88932.1| DNA repair protein radC [Escherichia sp. 3_2_53FAA]
 gi|227839084|gb|EEJ49550.1| DNA repair protein RadC [Escherichia coli 83972]
 gi|281603001|gb|ADA75985.1| DNA repair protein [Shigella flexneri 2002017]
 gi|290764882|gb|ADD58843.1| DNA repair protein [Escherichia coli O55:H7 str. CB9615]
 gi|300300701|gb|EFJ57086.1| DNA repair protein RadC [Escherichia coli MS 185-1]
 gi|300306946|gb|EFJ61466.1| DNA repair protein RadC [Escherichia coli MS 200-1]
 gi|300357758|gb|EFJ73628.1| DNA repair protein RadC [Escherichia coli MS 198-1]
 gi|300399461|gb|EFJ82999.1| DNA repair protein RadC [Escherichia coli MS 69-1]
 gi|300400615|gb|EFJ84153.1| DNA repair protein RadC [Escherichia coli MS 84-1]
 gi|300408242|gb|EFJ91780.1| DNA repair protein RadC [Escherichia coli MS 45-1]
 gi|300455879|gb|EFK19372.1| DNA repair protein RadC [Escherichia coli MS 21-1]
 gi|300840834|gb|EFK68594.1| DNA repair protein RadC [Escherichia coli MS 124-1]
 gi|308118808|gb|EFO56070.1| DNA repair protein RadC [Escherichia coli MS 145-7]
 gi|310334454|gb|EFQ00659.1| DNA repair protein radC [Escherichia coli 1827-70]
 gi|315254024|gb|EFU33992.1| DNA repair protein RadC [Escherichia coli MS 85-1]
 gi|315285375|gb|EFU44820.1| DNA repair protein RadC [Escherichia coli MS 110-3]
 gi|315292975|gb|EFU52327.1| DNA repair protein RadC [Escherichia coli MS 153-1]
 gi|323189454|gb|EFZ74735.1| DNA repair protein radC [Escherichia coli RN587/1]
 gi|324008143|gb|EGB77362.1| DNA repair protein RadC [Escherichia coli MS 57-2]
 gi|324012728|gb|EGB81947.1| DNA repair protein RadC [Escherichia coli MS 60-1]
 gi|325499444|gb|EGC97303.1| DNA repair protein RadC [Escherichia fergusonii ECD227]
 gi|331041951|gb|EGI14095.1| DNA repair protein RadC [Escherichia coli M605]
          Length = 224

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 218


>gi|331685301|ref|ZP_08385887.1| DNA repair protein RadC [Escherichia coli H299]
 gi|331077672|gb|EGI48884.1| DNA repair protein RadC [Escherichia coli H299]
          Length = 222

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|324019747|gb|EGB88966.1| DNA repair protein RadC [Escherichia coli MS 117-3]
          Length = 215

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 119 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 178

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 179 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 209


>gi|163855388|ref|YP_001629686.1| DNA repair protein radC-like protein [Bordetella petrii DSM 12804]
 gi|163259116|emb|CAP41415.1| DNA repair protein radC homolog [Bordetella petrii]
          Length = 164

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL+A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINSTSVYPRVVVQRVLELNAAAVVFAHQHPSGISEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DHII+G+ A  SF
Sbjct: 128 MLTQQLQAALALIDVRVLDHIIVGQGAPFSF 158


>gi|323944091|gb|EGB40171.1| DNA repair protein RadC [Escherichia coli H120]
          Length = 222

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|315297033|gb|EFU56313.1| DNA repair protein RadC [Escherichia coli MS 16-3]
          Length = 224

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 218


>gi|218691922|ref|YP_002400134.1| DNA repair protein RadC [Escherichia coli ED1a]
 gi|254789651|sp|B7N279|YICR_ECO81 RecName: Full=UPF0758 protein yicR
 gi|218429486|emb|CAR10450.2| protein associated with replication fork, putative DNA repair
           protein [Escherichia coli ED1a]
 gi|222035346|emb|CAP78091.1| DNA repair protein radC [Escherichia coli LF82]
 gi|281180684|dbj|BAI57014.1| DNA repair protein [Escherichia coli SE15]
 gi|312948199|gb|ADR29026.1| DNA repair protein RadC [Escherichia coli O83:H1 str. NRG 857C]
          Length = 222

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|157155076|ref|YP_001465118.1| DNA repair protein RadC [Escherichia coli E24377A]
 gi|168748714|ref|ZP_02773736.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4113]
 gi|168753462|ref|ZP_02778469.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4401]
 gi|168759735|ref|ZP_02784742.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4501]
 gi|168766058|ref|ZP_02791065.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4486]
 gi|168772396|ref|ZP_02797403.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4196]
 gi|168779793|ref|ZP_02804800.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4076]
 gi|168785514|ref|ZP_02810521.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC869]
 gi|168798583|ref|ZP_02823590.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC508]
 gi|170682096|ref|YP_001745938.1| DNA repair protein RadC [Escherichia coli SMS-3-5]
 gi|191167799|ref|ZP_03029605.1| DNA repair protein RadC [Escherichia coli B7A]
 gi|191170534|ref|ZP_03032087.1| DNA repair protein RadC [Escherichia coli F11]
 gi|194435617|ref|ZP_03067720.1| DNA repair protein RadC [Escherichia coli 101-1]
 gi|195936199|ref|ZP_03081581.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4024]
 gi|208807607|ref|ZP_03249944.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4206]
 gi|208814077|ref|ZP_03255406.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4045]
 gi|208819041|ref|ZP_03259361.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4042]
 gi|209399382|ref|YP_002273116.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4115]
 gi|215488917|ref|YP_002331348.1| DNA repair protein RadC [Escherichia coli O127:H6 str. E2348/69]
 gi|217325841|ref|ZP_03441925.1| DNA repair protein RadC [Escherichia coli O157:H7 str. TW14588]
 gi|218551166|ref|YP_002384957.1| DNA repair protein RadC [Escherichia fergusonii ATCC 35469]
 gi|218556201|ref|YP_002389114.1| DNA repair protein RadC [Escherichia coli IAI1]
 gi|218560710|ref|YP_002393623.1| DNA repair protein RadC [Escherichia coli S88]
 gi|218702404|ref|YP_002410033.1| DNA repair protein RadC [Escherichia coli IAI39]
 gi|218707272|ref|YP_002414791.1| DNA repair protein RadC [Escherichia coli UMN026]
 gi|254795593|ref|YP_003080430.1| DNA repair protein RadC [Escherichia coli O157:H7 str. TW14359]
 gi|260857967|ref|YP_003231858.1| protein associated with replication fork [Escherichia coli O26:H11
           str. 11368]
 gi|261224179|ref|ZP_05938460.1| DNA repair protein RadC [Escherichia coli O157:H7 str. FRIK2000]
 gi|261254790|ref|ZP_05947323.1| DNA repair protein RadC [Escherichia coli O157:H7 str. FRIK966]
 gi|293407261|ref|ZP_06651185.1| radC [Escherichia coli FVEC1412]
 gi|298383007|ref|ZP_06992602.1| DNA repair protein RadC [Escherichia coli FVEC1302]
 gi|306816014|ref|ZP_07450152.1| DNA repair protein RadC [Escherichia coli NC101]
 gi|307314277|ref|ZP_07593885.1| DNA repair protein RadC [Escherichia coli W]
 gi|312968021|ref|ZP_07782232.1| DNA repair protein radC [Escherichia coli 2362-75]
 gi|331659958|ref|ZP_08360896.1| DNA repair protein RadC [Escherichia coli TA206]
 gi|331665263|ref|ZP_08366164.1| DNA repair protein RadC [Escherichia coli TA143]
 gi|54039001|sp|P65958|YICR_ECO57 RecName: Full=UPF0758 protein yicR
 gi|54039002|sp|P65959|YICR_SHIFL RecName: Full=UPF0758 protein yicR
 gi|54041783|sp|P65957|YICR_ECOL6 RecName: Full=UPF0758 protein yicR
 gi|166918665|sp|A7ZTI9|YICR_ECO24 RecName: Full=UPF0758 protein yicR
 gi|171704420|sp|A1AHG9|YICR_ECOK1 RecName: Full=UPF0758 protein yicR
 gi|172045688|sp|Q0SYG5|YICR_SHIF8 RecName: Full=UPF0758 protein yicR
 gi|172045855|sp|Q0TBH1|YICR_ECOL5 RecName: Full=UPF0758 protein yicR
 gi|172046244|sp|Q1R4V4|YICR_ECOUT RecName: Full=UPF0758 protein yicR
 gi|226736620|sp|B7MFJ9|YICR_ECO45 RecName: Full=UPF0758 protein yicR
 gi|226736621|sp|B7NPZ9|YICR_ECO7I RecName: Full=UPF0758 protein yicR
 gi|226736622|sp|B7M4C3|YICR_ECO8A RecName: Full=UPF0758 protein yicR
 gi|226736623|sp|B7NEU2|YICR_ECOLU RecName: Full=UPF0758 protein yicR
 gi|226736624|sp|B1LK75|YICR_ECOSM RecName: Full=UPF0758 protein yicR
 gi|226736625|sp|B7LVJ9|YICR_ESCF3 RecName: Full=UPF0758 protein yicR
 gi|238054488|sp|B5YWD6|YICR_ECO5E RecName: Full=UPF0758 protein yicR
 gi|254789649|sp|B7ULJ3|YICR_ECO27 RecName: Full=UPF0758 protein yicR
 gi|30043347|gb|AAP19068.1| DNA repair protein [Shigella flexneri 2a str. 2457T]
 gi|56383942|gb|AAN45124.2| DNA repair protein [Shigella flexneri 2a str. 301]
 gi|157077106|gb|ABV16814.1| DNA repair protein RadC [Escherichia coli E24377A]
 gi|170519814|gb|ACB17992.1| DNA repair protein RadC [Escherichia coli SMS-3-5]
 gi|187771513|gb|EDU35357.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4196]
 gi|188016882|gb|EDU55004.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4113]
 gi|189002388|gb|EDU71374.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4076]
 gi|189359101|gb|EDU77520.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4401]
 gi|189364789|gb|EDU83208.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4486]
 gi|189369603|gb|EDU88019.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4501]
 gi|189374591|gb|EDU93007.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC869]
 gi|189378726|gb|EDU97142.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC508]
 gi|190902142|gb|EDV61885.1| DNA repair protein RadC [Escherichia coli B7A]
 gi|190909342|gb|EDV68928.1| DNA repair protein RadC [Escherichia coli F11]
 gi|194425160|gb|EDX41144.1| DNA repair protein RadC [Escherichia coli 101-1]
 gi|208727408|gb|EDZ77009.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4206]
 gi|208735354|gb|EDZ84041.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4045]
 gi|208739164|gb|EDZ86846.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4042]
 gi|209160782|gb|ACI38215.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4115]
 gi|215266989|emb|CAS11434.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli O127:H6 str. E2348/69]
 gi|217322062|gb|EEC30486.1| DNA repair protein RadC [Escherichia coli O157:H7 str. TW14588]
 gi|218358707|emb|CAQ91363.1| protein associated with replication fork, putative DNA repair
           protein [Escherichia fergusonii ATCC 35469]
 gi|218362969|emb|CAR00606.1| protein associated with replication fork, putative DNA repair
           protein [Escherichia coli IAI1]
 gi|218367479|emb|CAR05261.1| protein associated with replication fork, putative DNA repair
           protein [Escherichia coli S88]
 gi|218372390|emb|CAR20264.1| protein associated with replication fork, putative DNA repair
           protein [Escherichia coli IAI39]
 gi|218434369|emb|CAR15294.1| protein associated with replication fork, putative DNA repair
           protein [Escherichia coli UMN026]
 gi|254594993|gb|ACT74354.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|257756616|dbj|BAI28118.1| protein associated with replication fork [Escherichia coli O26:H11
           str. 11368]
 gi|284923671|emb|CBG36768.1| DNA repair protein [Escherichia coli 042]
 gi|291426072|gb|EFE99106.1| radC [Escherichia coli FVEC1412]
 gi|294489934|gb|ADE88690.1| DNA repair protein RadC [Escherichia coli IHE3034]
 gi|298276843|gb|EFI18361.1| DNA repair protein RadC [Escherichia coli FVEC1302]
 gi|305850410|gb|EFM50867.1| DNA repair protein RadC [Escherichia coli NC101]
 gi|306906100|gb|EFN36619.1| DNA repair protein RadC [Escherichia coli W]
 gi|307628711|gb|ADN73015.1| DNA repair protein RadC [Escherichia coli UM146]
 gi|309704040|emb|CBJ03386.1| DNA repair protein [Escherichia coli ETEC H10407]
 gi|312287280|gb|EFR15189.1| DNA repair protein radC [Escherichia coli 2362-75]
 gi|313647488|gb|EFS11938.1| DNA repair protein radC [Shigella flexneri 2a str. 2457T]
 gi|315062926|gb|ADT77253.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli W]
 gi|320191311|gb|EFW65961.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC1212]
 gi|320193855|gb|EFW68488.1| DNA repair protein RadC [Escherichia coli WV_060327]
 gi|320201337|gb|EFW75918.1| DNA repair protein RadC [Escherichia coli EC4100B]
 gi|320639545|gb|EFX09153.1| hypothetical protein ECO5101_20865 [Escherichia coli O157:H7 str.
           G5101]
 gi|320644984|gb|EFX14014.1| hypothetical protein ECO9389_10227 [Escherichia coli O157:H- str.
           493-89]
 gi|320650251|gb|EFX18740.1| hypothetical protein ECO2687_12698 [Escherichia coli O157:H- str. H
           2687]
 gi|320655603|gb|EFX23531.1| hypothetical protein ECO7815_06054 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661337|gb|EFX28761.1| hypothetical protein ECO5905_11396 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|323155289|gb|EFZ41472.1| DNA repair protein radC [Escherichia coli EPECa14]
 gi|323376481|gb|ADX48749.1| DNA repair protein RadC [Escherichia coli KO11]
 gi|323939603|gb|EGB35809.1| DNA repair protein RadC [Escherichia coli E482]
 gi|323949877|gb|EGB45761.1| DNA repair protein RadC [Escherichia coli H252]
 gi|323954822|gb|EGB50602.1| DNA repair protein RadC [Escherichia coli H263]
 gi|323959886|gb|EGB55534.1| DNA repair protein RadC [Escherichia coli H489]
 gi|323965904|gb|EGB61352.1| DNA repair protein RadC [Escherichia coli M863]
 gi|323971280|gb|EGB66525.1| DNA repair protein RadC [Escherichia coli TA007]
 gi|323975142|gb|EGB70247.1| DNA repair protein RadC [Escherichia coli TW10509]
 gi|324111532|gb|EGC05513.1| DNA repair protein RadC [Escherichia fergusonii B253]
 gi|326337363|gb|EGD61198.1| DNA repair protein RadC [Escherichia coli O157:H7 str. 1044]
 gi|326339888|gb|EGD63695.1| DNA repair protein RadC [Escherichia coli O157:H7 str. 1125]
 gi|327250764|gb|EGE62466.1| DNA repair protein radC [Escherichia coli STEC_7v]
 gi|331053173|gb|EGI25206.1| DNA repair protein RadC [Escherichia coli TA206]
 gi|331057773|gb|EGI29759.1| DNA repair protein RadC [Escherichia coli TA143]
          Length = 222

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|312963850|ref|ZP_07778321.1| hypothetical protein PFWH6_5769 [Pseudomonas fluorescens WH6]
 gi|311281885|gb|EFQ60495.1| hypothetical protein PFWH6_5769 [Pseudomonas fluorescens WH6]
          Length = 224

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 54/84 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E  S+GTID   VY R++V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDSRHRVLGFEALSQGTIDTALVYPRQVVKRALAYNAAALILCHNHPSGVAQPSAADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            MT+ +   L  +++ V DHII+G
Sbjct: 188 KMTKTLQKALEVVDVRVLDHIIVG 211


>gi|123440463|ref|YP_001004457.1| DNA repair protein RadC [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166218800|sp|A1JHX2|Y063_YERE8 RecName: Full=UPF0758 protein YE0063
 gi|122087424|emb|CAL10205.1| putative DNA repair protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 222

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V ++ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEIHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT  +I   + L+I V DH+++G+   VSF
Sbjct: 186 LMTTQVIKACSLLDIRVLDHLVVGRGECVSF 216


>gi|332084818|gb|EGI90001.1| DNA repair protein radC [Shigella boydii 5216-82]
          Length = 188

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 92  IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 151

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 152 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 182


>gi|193063880|ref|ZP_03044967.1| DNA repair protein RadC [Escherichia coli E22]
 gi|218697359|ref|YP_002405026.1| DNA repair protein RadC [Escherichia coli 55989]
 gi|256021358|ref|ZP_05435223.1| DNA repair protein RadC [Shigella sp. D9]
 gi|256025632|ref|ZP_05439497.1| DNA repair protein RadC [Escherichia sp. 4_1_40B]
 gi|260846597|ref|YP_003224375.1| protein associated with replication fork [Escherichia coli O103:H2
           str. 12009]
 gi|307140336|ref|ZP_07499692.1| DNA repair protein RadC [Escherichia coli H736]
 gi|172046624|sp|Q31UY8|YICR_SHIBS RecName: Full=UPF0758 protein yicR
 gi|254789650|sp|B7L757|YICR_ECO55 RecName: Full=UPF0758 protein yicR
 gi|192930595|gb|EDV83202.1| DNA repair protein RadC [Escherichia coli E22]
 gi|218354091|emb|CAV00643.1| protein associated with replication fork, putative DNA repair
           protein [Escherichia coli 55989]
 gi|257761744|dbj|BAI33241.1| protein associated with replication fork [Escherichia coli O103:H2
           str. 12009]
 gi|320176303|gb|EFW51363.1| DNA repair protein RadC [Shigella dysenteriae CDC 74-1112]
 gi|320186822|gb|EFW61542.1| DNA repair protein RadC [Shigella flexneri CDC 796-83]
 gi|323182666|gb|EFZ68069.1| DNA repair protein radC [Escherichia coli 1357]
 gi|323934817|gb|EGB31199.1| DNA repair protein RadC [Escherichia coli E1520]
 gi|324116023|gb|EGC09949.1| DNA repair protein RadC [Escherichia coli E1167]
          Length = 222

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|332159686|ref|YP_004296263.1| DNA repair protein RadC [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|318603785|emb|CBY25283.1| DNA repair protein RadC [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325663916|gb|ADZ40560.1| DNA repair protein RadC [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330859989|emb|CBX70317.1| DNA repair protein radC homolog [Yersinia enterocolitica W22703]
          Length = 222

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V ++ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEIHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT  +I   + L+I V DH+++G+   VSF
Sbjct: 186 LMTTQVIKACSLLDIRVLDHLVVGRGECVSF 216


>gi|323166879|gb|EFZ52618.1| DNA repair radC domain protein [Shigella sonnei 53G]
          Length = 171

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 75  IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 134

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 135 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 165


>gi|224370717|ref|YP_002604881.1| RadC3 [Desulfobacterium autotrophicum HRM2]
 gi|223693434|gb|ACN16717.1| RadC3 [Desulfobacterium autotrophicum HRM2]
          Length = 279

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++A E+   G++    VY RE++ + LE  A ++I  HNHPSG  +PS  D+
Sbjct: 171 IFLDAKNRVLASEILFEGSLSSSAVYPREVIAKALEHRAAALIFAHNHPSGETSPSPEDL 230

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L    I VH+H+I G + F SF    II
Sbjct: 231 AITRRLFFALAHAGITVHEHLITGGERFYSFADQGII 267


>gi|157149255|ref|YP_001456574.1| DNA repair protein RadC [Citrobacter koseri ATCC BAA-895]
 gi|166218775|sp|A8ARM5|Y5095_CITK8 RecName: Full=UPF0758 protein CKO_05095
 gi|157086460|gb|ABV16138.1| hypothetical protein CKO_05095 [Citrobacter koseri ATCC BAA-895]
          Length = 220

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++L+A+++IL HNHPSG   PS AD 
Sbjct: 124 IFLDARHRVIKHSRLFSGTLNHVEVHPREIIREAIKLNASAVILAHNHPSGCAEPSKADK 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++     ++I V DH++IG+  +VSF
Sbjct: 184 LITERVVKCCQFMDIRVLDHLVIGRGEYVSF 214


>gi|256027337|ref|ZP_05441171.1| DNA repair protein radC [Fusobacterium sp. D11]
 gi|289765306|ref|ZP_06524684.1| DNA repair protein radC [Fusobacterium sp. D11]
 gi|289716861|gb|EFD80873.1| DNA repair protein radC [Fusobacterium sp. D11]
          Length = 232

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI +R + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSAGTLDRSSVYPREIYKRVISLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I   L     ++ +HIII K+++ SF
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSF 226


>gi|323173231|gb|EFZ58860.1| DNA repair protein radC [Escherichia coli LT-68]
          Length = 214

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 118 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   + + V DHI+IG+  +VSF
Sbjct: 178 LITERIIKSCQFMELRVLDHIVIGRGEYVSF 208


>gi|262065984|ref|ZP_06025596.1| DNA repair protein RadC [Fusobacterium periodonticum ATCC 33693]
 gi|291380341|gb|EFE87859.1| DNA repair protein RadC [Fusobacterium periodonticum ATCC 33693]
          Length = 237

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N ++A E  S GT+D   +Y REI +R +  +A SII+ HNHPSGN +PS  DI
Sbjct: 141 IYLSSSNEVLAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNISPSKCDI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T  I   L     ++ +HIII +D++ SF
Sbjct: 201 DITNEIAKGLKNFGALLIEHIIITRDSYFSF 231


>gi|238790651|ref|ZP_04634415.1| DNA repair protein, RadC family [Yersinia frederiksenii ATCC 33641]
 gi|238721256|gb|EEQ12932.1| DNA repair protein, RadC family [Yersinia frederiksenii ATCC 33641]
          Length = 157

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 57/94 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+A E  S GT +   VY RE+V R L     ++++ HNHP+G+P PS AD 
Sbjct: 59  LYLDNRHRLMASETMSIGTFNATTVYPREVVIRALHHHCAAVVIAHNHPAGDPTPSQADR 118

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T  ++  LN ++I V DH+IIG+   VS   L
Sbjct: 119 TLTTRLVNALNMVDIRVLDHLIIGESEPVSLAEL 152


>gi|238794329|ref|ZP_04637941.1| radC-like protein yeeS [Yersinia intermedia ATCC 29909]
 gi|238726323|gb|EEQ17865.1| radC-like protein yeeS [Yersinia intermedia ATCC 29909]
          Length = 159

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N L+A E    GT+ H  V+ RE+V+R L  +A ++I  HNHPSG   PS AD 
Sbjct: 63  LYLNNQNQLLAHETLFTGTLSHTEVHPREVVKRALYFNAAAVIFAHNHPSGEVAPSQADK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ ++  L  + I V DH+I+G     SF
Sbjct: 123 AITQRLVQALMLVEIRVPDHLIVGGRQIFSF 153


>gi|120612416|ref|YP_972094.1| DNA repair protein RadC [Acidovorax citrulli AAC00-1]
 gi|171769198|sp|A1TTN2|Y3773_ACIAC RecName: Full=UPF0758 protein Aave_3773
 gi|120590880|gb|ABM34320.1| DNA replication and repair protein RadC [Acidovorax citrulli
           AAC00-1]
          Length = 237

 Score = 78.6 bits (192), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGT+    VY RE+V R L   A +++LVHNHPSG   PS AD 
Sbjct: 141 LFLDSQNGLIAMEEMFRGTLSQASVYPREVVVRALHHHAAAVVLVHNHPSGQVQPSRADE 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+++   L  +++ V DHII+   + +S 
Sbjct: 201 TLTRSLTDALRLVDVRVLDHIIVAPGSSLSM 231


>gi|187925122|ref|YP_001896764.1| DNA repair protein RadC [Burkholderia phytofirmans PsJN]
 gi|238689615|sp|B2T6H6|Y3148_BURPP RecName: Full=UPF0758 protein Bphyt_3148
 gi|187716316|gb|ACD17540.1| DNA repair protein RadC [Burkholderia phytofirmans PsJN]
          Length = 259

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  ++GT+  + VY REIV+R L L+A S+I+ HNHPSG   PS +D 
Sbjct: 163 LFLDARHRLIHCEESAQGTLTRMAVYPREIVRRALSLNAASLIVAHNHPSGAVQPSASDC 222

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  +++ + DH+++G D+  SF
Sbjct: 223 RLTHTLRDALTLIDVQLVDHLVVGVDSVYSF 253


>gi|238798812|ref|ZP_04642281.1| DNA repair protein radC [Yersinia mollaretii ATCC 43969]
 gi|238717320|gb|EEQ09167.1| DNA repair protein radC [Yersinia mollaretii ATCC 43969]
          Length = 222

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT  +I   + L+I V DH+++G+   VSF
Sbjct: 186 LMTTQVIKACSILDIRVLDHLVVGRGECVSF 216


>gi|319764035|ref|YP_004127972.1| DNA repair protein radc [Alicycliphilus denitrificans BC]
 gi|330823690|ref|YP_004386993.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
 gi|317118596|gb|ADV01085.1| DNA repair protein RadC [Alicycliphilus denitrificans BC]
 gi|329309062|gb|AEB83477.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
          Length = 237

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGT+    VY RE+V R L   A +++L HNHPSG+  PS AD 
Sbjct: 141 LFLDGQNRLIAMEELFRGTLTQTSVYPREVVLRALHHHAAAVVLAHNHPSGSVQPSRADE 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DH+I+   A +S 
Sbjct: 201 ALTQTLKAALALVDVRVLDHVIVAPGAALSM 231


>gi|291546142|emb|CBL19250.1| DNA replication and repair protein RadC [Ruminococcus sp. SR1/5]
          Length = 235

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD HN L  +++ SRGT++   +  RE+    ++  A ++ILVHNHP G+P+PS AD+
Sbjct: 135 MMLDGHNHLSGEQLLSRGTVNATLITPREVFVEAVKYRAVNLILVHNHPGGDPSPSQADL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ I      L I + DHIIIG   +VSF+
Sbjct: 195 DVTERIYHCGELLGIHLLDHIIIGDHRYVSFR 226


>gi|221064731|ref|ZP_03540836.1| DNA repair protein RadC [Comamonas testosteroni KF-1]
 gi|319764685|ref|YP_004128622.1| DNA repair protein radc [Alicycliphilus denitrificans BC]
 gi|220709754|gb|EED65122.1| DNA repair protein RadC [Comamonas testosteroni KF-1]
 gi|317119246|gb|ADV01735.1| DNA repair protein RadC [Alicycliphilus denitrificans BC]
          Length = 164

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL+A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSLHQVLAYEPLFRGTINATSVYPRVVVQRVLELNAAAVVFAHQHPSGVSEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DHII+G+ A  SF
Sbjct: 128 MLTQQLQAALALIDVRVLDHIIVGQGAPFSF 158


>gi|293376482|ref|ZP_06622711.1| DNA repair protein RadC [Turicibacter sanguinis PC909]
 gi|325842026|ref|ZP_08167563.1| DNA repair protein RadC [Turicibacter sp. HGF1]
 gi|292644904|gb|EFF62985.1| DNA repair protein RadC [Turicibacter sanguinis PC909]
 gi|325489748|gb|EGC92104.1| DNA repair protein RadC [Turicibacter sp. HGF1]
          Length = 223

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I+ +    G+++   V+ RE+ +  ++ SA S+I  HNHPSG+P PS+ DI
Sbjct: 127 LFLDTKNYIISKKTIFIGSLNKAIVHPREVFKEAIKRSAASVICAHNHPSGDPTPSEQDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T  +      + I V DH+IIG D FVS K
Sbjct: 187 GLTHRLYEAGELIGIKVLDHLIIGDDQFVSLK 218


>gi|238789557|ref|ZP_04633341.1| DNA repair protein radC [Yersinia frederiksenii ATCC 33641]
 gi|238722310|gb|EEQ13966.1| DNA repair protein radC [Yersinia frederiksenii ATCC 33641]
          Length = 235

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 139 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVRAALKVNAAALILAHNHPSGKAEPSQADR 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT  ++   + L+I V DH+++G+   VSF
Sbjct: 199 LMTTQVVKACSLLDIRVLDHLVVGRGECVSF 229


>gi|21242914|ref|NP_642496.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108411|gb|AAM37032.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 169

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   V+ RE+V+  L  +A ++IL HNHPSG+P PS AD 
Sbjct: 73  LFLDTQHRLIEYTEMFRGTIDSASVHPREVVKEALRTNAAAVILAHNHPSGHPEPSTADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L  +++   DHII+   A  SF  +GL
Sbjct: 133 ALTRQLKAALELVDVRTLDHIIVAGGANTSFAERGL 168


>gi|288942684|ref|YP_003444924.1| DNA repair protein RadC [Allochromatium vinosum DSM 180]
 gi|288898056|gb|ADC63892.1| DNA repair protein RadC [Allochromatium vinosum DSM 180]
          Length = 224

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 60/92 (65%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           LFLD +H +++ +E+  RGTID   V+ RE+V+R ++ +A ++I  HNHPSG   PS AD
Sbjct: 128 LFLDNRHRVIVYEEL-FRGTIDGASVHPREVVRRVIQTNAAAVIFAHNHPSGVAEPSQAD 186

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           + +TQ +   L  +++ V DHII+G     SF
Sbjct: 187 LRITQRLKEALALIDVRVLDHIIVGDGDGTSF 218


>gi|206578396|ref|YP_002240722.1| DNA repair protein, RadC family [Klebsiella pneumoniae 342]
 gi|206567454|gb|ACI09230.1| DNA repair protein, RadC family [Klebsiella pneumoniae 342]
          Length = 161

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  + L+  E    G+I+HV V+ RE+V+  L  +A +++L HNHPSG+P PS  D 
Sbjct: 65  LYLNNQHCLLESETLFAGSINHVQVHPREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDR 124

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           N+T  +   L  +++   DH++IG +  VSF
Sbjct: 125 NITGRLKEALALVDVNTLDHLVIGSEGIVSF 155


>gi|161616810|ref|YP_001590774.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|161366174|gb|ABX69942.1| hypothetical protein SPAB_04629 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 279

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 62/92 (67%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L    + S GT++HV V+ REIV+  ++ +A+++IL HNHPSG   PS AD
Sbjct: 183 IFLDAQHRVLQHSRLFS-GTLNHVEVHPREIVREAIKFNASAVILAHNHPSGCAEPSKAD 241

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +I     ++I V DH+IIG+  +VSF
Sbjct: 242 KLITERVIKCCQFMDIRVLDHLIIGRGEYVSF 273


>gi|146309768|ref|YP_001174842.1| DNA repair protein RadC [Enterobacter sp. 638]
 gi|166918667|sp|A4W511|Y101_ENT38 RecName: Full=UPF0758 protein Ent638_0101
 gi|145316644|gb|ABP58791.1| DNA replication and repair protein RadC [Enterobacter sp. 638]
          Length = 221

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT+ HV V+ REIV+  ++++A ++IL HNHPSG   PS AD 
Sbjct: 125 IFLDNQHRVVKHSRMFSGTLRHVEVHPREIVREAIKVNAAAVILAHNHPSGCAEPSKADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ II     ++I V DH IIG+  +VSF
Sbjct: 185 DITERIIKCCQFMDIHVLDHFIIGRGEYVSF 215


>gi|292493862|ref|YP_003529301.1| DNA repair protein RadC [Nitrosococcus halophilus Nc4]
 gi|291582457|gb|ADE16914.1| DNA repair protein RadC [Nitrosococcus halophilus Nc4]
          Length = 224

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A E   RGTID   V+ RE+++R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNRHRVLAFEELFRGTIDGASVHPREVIKRALAHNAAAVILAHNHPSGVAEPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +  TL  ++I V DHII+G    +SF  +GL
Sbjct: 188 LITQRLKETLALVDIRVLDHIIVGDGETLSFAERGL 223


>gi|82779128|ref|YP_405477.1| DNA repair protein RadC [Shigella dysenteriae Sd197]
 gi|81243276|gb|ABB63986.1| DNA repair protein [Shigella dysenteriae Sd197]
          Length = 224

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRIFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 218


>gi|307133081|ref|YP_003885097.1| protein associated with replication fork, putative DNA repair
           protein [Dickeya dadantii 3937]
 gi|306530610|gb|ADN00541.1| protein associated with replication fork, possible DNA repair
           protein [Dickeya dadantii 3937]
          Length = 232

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  +    GTI  V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 136 MFLDNQHRVIRHQEMFAGTISSVEVHPREIVREALKANAAALILAHNHPSGRAEPSQADR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T  I      L+I V DH++IG+  +VSF
Sbjct: 196 SITGKIAQACQLLDIRVLDHLVIGRGEYVSF 226


>gi|56459745|ref|YP_155026.1| RadC family protein [Idiomarina loihiensis L2TR]
 gi|56178755|gb|AAV81477.1| RadC family protein [Idiomarina loihiensis L2TR]
          Length = 158

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 3/96 (3%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD+    I       GTI+   VY RE+V+  LE  A+S++L HNHPSG   PS+ADI
Sbjct: 63  IFLDEKGHFIEYRELFYGTINAASVYPREVVRAALETKASSLVLSHNHPSGEAEPSNADI 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L  +++ V DHI++GK+  VSF  +GL
Sbjct: 123 RLTERLQKALAVIDVEVKDHIVVGKEC-VSFSERGL 157


>gi|149376403|ref|ZP_01894165.1| DNA repair protein RadC [Marinobacter algicola DG893]
 gi|149359244|gb|EDM47706.1| DNA repair protein RadC [Marinobacter algicola DG893]
          Length = 224

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +   RGTID   VY RE+V++ LE +A ++I  HNHPSG   PS +DI
Sbjct: 128 LFLDNRHRVIRYQELFRGTIDGAAVYPREVVRQALEFNAAAVIFAHNHPSGVAEPSQSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           ++T+ +   L  ++I V DH+++G    +S   +GL
Sbjct: 188 SLTRRLKEALGLVDIRVLDHMVVGHGEVISLAERGL 223


>gi|42665|emb|CAA44966.1| radC [Escherichia coli K-12]
 gi|42667|emb|CAA44967.1| radC [Escherichia coli K-12]
 gi|383570|prf||1903291A radC gene
 gi|444279|prf||1906333A radC gene
          Length = 99

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 3  IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 62

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 63 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 93


>gi|161525489|ref|YP_001580501.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616]
 gi|189349783|ref|YP_001945411.1| DNA repair protein [Burkholderia multivorans ATCC 17616]
 gi|160342918|gb|ABX16004.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616]
 gi|189333805|dbj|BAG42875.1| DNA repair protein [Burkholderia multivorans ATCC 17616]
          Length = 169

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   V+ RE+V+  L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 73  LFLDTRHRLIDYAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            MT  +   L  +++   DHII+      SF  +GL
Sbjct: 133 AMTSQLRQALALVDVRTLDHIIVAGGTTTSFAERGL 168


>gi|309784385|ref|ZP_07679024.1| DNA repair protein radC [Shigella dysenteriae 1617]
 gi|172046622|sp|Q329L9|YICR_SHIDS RecName: Full=UPF0758 protein yicR
 gi|308927892|gb|EFP73360.1| DNA repair protein radC [Shigella dysenteriae 1617]
          Length = 222

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRIFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|251793907|ref|YP_003008639.1| DNA repair protein RadC [Aggregatibacter aphrophilus NJ8700]
 gi|247535306|gb|ACS98552.1| DNA repair protein RadC [Aggregatibacter aphrophilus NJ8700]
          Length = 219

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 123 LFLDTQHRLIKQENLFLGTINQAMVYPREIIKEALACNAAALILAHNHPSGVAEPSFSDR 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           N+TQ I      + I V DH +IG+  + SF
Sbjct: 183 NITQKIKQAAELMEIRVLDHFVIGRGCYFSF 213


>gi|242237618|ref|YP_002985799.1| DNA repair protein RadC [Dickeya dadantii Ech703]
 gi|242129675|gb|ACS83977.1| DNA repair protein RadC [Dickeya dadantii Ech703]
          Length = 221

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  +    GTI+ V V+ RE+V+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 125 MFLDNQHHVIRYQEMFAGTINSVEVHPREVVREALKSNAAALILAHNHPSGRAEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T++I+     L I V DH++IG+  +VSF
Sbjct: 185 RITEHIVNACRLLEIRVLDHLVIGRGEYVSF 215


>gi|158320795|ref|YP_001513302.1| DNA repair protein RadC [Alkaliphilus oremlandii OhILAs]
 gi|172048007|sp|A8MHM4|Y1766_ALKOO RecName: Full=UPF0758 protein Clos_1766
 gi|158140994|gb|ABW19306.1| DNA repair protein RadC [Alkaliphilus oremlandii OhILAs]
          Length = 232

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 63/97 (64%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L   KH+I IA E  S G+++   V+ RE+  R ++ S+++IIL HNHPSG+PNPS  DI
Sbjct: 137 LLTTKHDI-IAIENISVGSLNASIVHPREVFNRAIKRSSSAIILAHNHPSGDPNPSGEDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ +I   N + I V DHIIIG   + S K  ++I
Sbjct: 196 NITKRLIEAGNIIGISVLDHIIIGDGVYFSMKEHKLI 232


>gi|260494432|ref|ZP_05814562.1| DNA repair protein radC [Fusobacterium sp. 3_1_33]
 gi|260197594|gb|EEW95111.1| DNA repair protein radC [Fusobacterium sp. 3_1_33]
          Length = 232

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI +R + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSTGTLDRSSVYPREIYKRVINLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I   L     ++ +HIII K+++ SF
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSF 226


>gi|237728935|ref|ZP_04559416.1| DNA repair protein radC [Citrobacter sp. 30_2]
 gi|226909557|gb|EEH95475.1| DNA repair protein radC [Citrobacter sp. 30_2]
          Length = 234

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  + +I       GT+ HV V+ REIV+  ++++A+++IL HNHPSG   PS AD 
Sbjct: 138 IFMDSQHRVIKHSKLFSGTLSHVEVHPREIVREAIKMNASAVILAHNHPSGCAEPSKADK 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++     ++I V DH++IG+  +VSF
Sbjct: 198 LITERVVKCCQFMDIRVLDHLVIGRGEYVSF 228


>gi|108763923|ref|YP_630190.1| DNA repair protein RadC [Myxococcus xanthus DK 1622]
 gi|108467803|gb|ABF92988.1| DNA repair protein RadC [Myxococcus xanthus DK 1622]
          Length = 241

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  +  N+L+ D   + GT++  PV  RE+    L   ATSI+L HNHPSG+P PS  D+
Sbjct: 127 LCFNARNVLVHDARVAEGTMNTCPVDPREVFAAALTSRATSIVLAHNHPSGDPEPSVQDL 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T++++     LNI V DH+++G   +VS 
Sbjct: 187 GLTRHLVAGAQLLNIKVLDHVVMGDGGYVSM 217


>gi|300923422|ref|ZP_07139463.1| DNA repair protein RadC domain protein [Escherichia coli MS 182-1]
 gi|300420332|gb|EFK03643.1| DNA repair protein RadC domain protein [Escherichia coli MS 182-1]
          Length = 128

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 32  IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 91

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 92  LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 122


>gi|237744553|ref|ZP_04575034.1| DNA repair protein radC [Fusobacterium sp. 7_1]
 gi|229431782|gb|EEO41994.1| DNA repair protein radC [Fusobacterium sp. 7_1]
          Length = 232

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI +R + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSTGTLDRSSVYPREIYKRVINLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I   L     ++ +HIII K+++ SF
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSF 226


>gi|114776910|ref|ZP_01451953.1| DNA repair protein RadC [Mariprofundus ferrooxydans PV-1]
 gi|114552996|gb|EAU55427.1| DNA repair protein RadC [Mariprofundus ferrooxydans PV-1]
          Length = 261

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 54/92 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F D+ + L+  ++   GT+D   VY R +++R LEL A  +IL HNHP G P+ S+ DI
Sbjct: 165 MFTDQQHRLLTTQILFEGTVDRTAVYPRNLMKRALELDARGMILFHNHPGGTPHASNEDI 224

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +     PL + + DH +I     +SF+
Sbjct: 225 ELTRRMAEACAPLELKILDHFLIADKEVLSFR 256


>gi|223041556|ref|ZP_03611757.1| DNA repair protein RadC-like protein [Actinobacillus minor 202]
 gi|223017651|gb|EEF16061.1| DNA repair protein RadC-like protein [Actinobacillus minor 202]
          Length = 221

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  E    GTI+   V+ RE+++  L+ +A +II+ HNHPSG   PS+AD 
Sbjct: 123 LFLDNQNRLIRTEKMFFGTINQASVHPREVIKAALKCNAAAIIIAHNHPSGECTPSEADR 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ I    + ++I   DHII+GK  + SF+
Sbjct: 183 HLTRRIEMACSLVDIRFVDHIIVGKGDYFSFE 214


>gi|295095223|emb|CBK84313.1| DNA replication and repair protein RadC [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 221

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++++A  +IL HNHPSG   PS AD 
Sbjct: 125 IFLDNKNRVLKHTRLFSGTLSHVEVHPREIVREAIKVNAAGVILAHNHPSGCAEPSRADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II     ++I V DH+IIG+  ++SF
Sbjct: 185 AITERIIKCCQFMDIRVLDHLIIGRGEYISF 215


>gi|91228537|ref|ZP_01262458.1| DNA repair protein RadC [Vibrio alginolyticus 12G01]
 gi|91187913|gb|EAS74224.1| DNA repair protein RadC [Vibrio alginolyticus 12G01]
          Length = 155

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 3/96 (3%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + LIA E    GTID   VY RE+++  L+++A ++I  HNHPSG+  PS AD 
Sbjct: 60  MFLDNQHRLIAFEELFFGTIDSASVYPREVLKAALKINAAALIFAHNHPSGDATPSQADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  ++I V DHI++G D+ +SF  +GL
Sbjct: 120 QITQRLKEALALVDIRVLDHIVVG-DSAISFAERGL 154


>gi|160897347|ref|YP_001562929.1| DNA repair protein RadC [Delftia acidovorans SPH-1]
 gi|238687206|sp|A9BYK1|Y1904_DELAS RecName: Full=UPF0758 protein Daci_1904
 gi|160362931|gb|ABX34544.1| DNA repair protein RadC [Delftia acidovorans SPH-1]
          Length = 226

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 54/93 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGT+    VY RE+V R L   A ++IL HNHPSG    S AD 
Sbjct: 130 LFLDGQHRLIALEEMFRGTLTRTSVYPREVVLRALHHHAGAVILAHNHPSGQVQASAADK 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +TQN+   L  ++I V DH+I+   A +S  G
Sbjct: 190 AVTQNLQAALRLVDIQVLDHVIVAPGASLSMAG 222


>gi|134298847|ref|YP_001112343.1| DNA repair protein RadC [Desulfotomaculum reducens MI-1]
 gi|134051547|gb|ABO49518.1| DNA replication and repair protein RadC [Desulfotomaculum reducens
           MI-1]
          Length = 231

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I  E  S GT++   V+ RE+ ++ +  SA ++ILVHNHPSG+P PS  DI
Sbjct: 135 LLLNTKNHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +I     + I V DHI++G D F S K   +I
Sbjct: 195 SLTKRLIEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231


>gi|21228893|ref|NP_634815.1| DNA repair protein RadC [Methanosarcina mazei Go1]
 gi|25009023|sp|Q8PTC5|Y2791_METMA RecName: Full=UPF0758 protein MM_2791
 gi|20907423|gb|AAM32487.1| DNA repair protein [Methanosarcina mazei Go1]
          Length = 229

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 60/92 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N ++ +EV S G+++   V+ RE+ +  L  S+ S+I+VHNHPSG+P+PS  DI
Sbjct: 132 LYLDTKNQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMVHNHPSGDPSPSREDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++     L I + DHIIIG   +VS K
Sbjct: 192 MVTEKLVEGGKLLGIDILDHIIIGDGRYVSLK 223


>gi|294495396|ref|YP_003541889.1| DNA replication and repair protein RadC [Methanohalophilus mahii
           DSM 5219]
 gi|292666395|gb|ADE36244.1| DNA replication and repair protein RadC [Methanohalophilus mahii
           DSM 5219]
          Length = 229

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++ +EV S G+++   V+ RE+ +  L  SA S+IL HNHPSG+P PS  DI
Sbjct: 132 LHLDTKNQVLREEVVSIGSLNANIVHPREVFKSALLESAASVILTHNHPSGDPTPSREDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N+T+ ++     L I V DH+IIG+  FVS K
Sbjct: 192 NITRKLVDGGKILGIDVLDHVIIGEGKFVSLK 223


>gi|261820014|ref|YP_003258120.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163]
 gi|261604027|gb|ACX86513.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163]
          Length = 158

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N LI+ E    GTI+ V V+  E+ ++ + L+A ++I  HNHPSGN  PS+AD 
Sbjct: 62  LFLNNQNRLISCEFLFAGTINSVEVHPGEVARQAIRLNAAAVIFAHNHPSGNAEPSNADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L+ + I V DH+++G    VSF
Sbjct: 122 KITEKLVNALSLIEIRVLDHVVVGHGEIVSF 152


>gi|107102082|ref|ZP_01366000.1| hypothetical protein PaerPA_01003131 [Pseudomonas aeruginosa PACS2]
 gi|134095214|ref|YP_001100289.1| RadC family DNA repair protein [Herminiimonas arsenicoxydans]
 gi|133739117|emb|CAL62166.1| putative DNA repair protein RadC [Herminiimonas arsenicoxydans]
          Length = 164

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPMFRGTINSTAVYPRVVVQRVLELKAAAVVFAHQHPSGVTEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DHII+G+    SF
Sbjct: 128 ALTQQLQAALALIDVRVLDHIIVGQGIPYSF 158


>gi|160871642|ref|ZP_02061774.1| DNA repair protein RadC [Rickettsiella grylli]
 gi|159120441|gb|EDP45779.1| DNA repair protein RadC [Rickettsiella grylli]
          Length = 224

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 56/93 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  I  +    G+I+   VY RE++++  + +A ++IL HNHPSGN  PSDAD 
Sbjct: 128 LFLDNTHRFIFFKELFHGSINEATVYPRELIRQVYQHNAAAVILAHNHPSGNAKPSDADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +TQ I T L  +++ + DHIIIG     SF  
Sbjct: 188 RLTQEIKTILTAIDVRLLDHIIIGSGCITSFAA 220


>gi|317484766|ref|ZP_07943665.1| DNA repair protein RadC [Bilophila wadsworthia 3_1_6]
 gi|316923973|gb|EFV45160.1| DNA repair protein RadC [Bilophila wadsworthia 3_1_6]
          Length = 226

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 52/90 (57%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           +D  N L+  E  +RGT+  VP Y R+I++R L+  A+   LVHNHP G P  S  DI M
Sbjct: 132 VDAQNRLLTWERLARGTVGMVPCYPRDILERVLQRKASGFFLVHNHPGGTPKASPEDIEM 191

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           T+NI      + + + DH+I+G  A  S +
Sbjct: 192 TRNIQRIATSMGLRLLDHLIVGDGACYSIR 221


>gi|120556469|ref|YP_960820.1| DNA repair protein RadC [Marinobacter aquaeolei VT8]
 gi|166218785|sp|A1U6L4|Y3564_MARAV RecName: Full=UPF0758 protein Maqu_3564
 gi|120326318|gb|ABM20633.1| DNA replication and repair protein RadC [Marinobacter aquaeolei
           VT8]
          Length = 224

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I      RGTID   VY RE+V++ LE +A ++I  HNHPSG   PS ADI
Sbjct: 128 LFLDNRHRVIQYRELFRGTIDGAAVYPREVVRQALEDNAAAVIFAHNHPSGVAEPSQADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           ++T+ +   L  ++I V DH++IG    +S   +GL
Sbjct: 188 SLTRRLKEALGLVDIRVLDHMVIGHGEVISLAERGL 223


>gi|310765969|gb|ADP10919.1| DNA repair protein RadC [Erwinia sp. Ejp617]
          Length = 223

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            F ++H ++   E+ S GT++ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 128 FFDNQHRVIHTSEMFS-GTLNSVEVHPREIVREALKRNAAALILAHNHPSGLAEPSRADR 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++TQ I+   + +NI V DH++IG+  +VSF
Sbjct: 187 DITQQIVHACSLMNIRVLDHMVIGRGEYVSF 217


>gi|291086416|ref|ZP_06571500.1| DNA repair protein RadC [Citrobacter youngae ATCC 29220]
 gi|291068199|gb|EFE06308.1| DNA repair protein RadC [Citrobacter youngae ATCC 29220]
          Length = 215

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  + +I       GT+ HV V+ REIV+  ++++A+++IL HNHPSG   PS AD 
Sbjct: 119 IFMDSQHHVIKHSKLFSGTLSHVEVHPREIVREAIKMNASAVILAHNHPSGCAEPSKADK 178

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++     ++I V DH+IIG+  +VSF
Sbjct: 179 LITERVVKCCQFMDIRVLDHLIIGRGEYVSF 209


>gi|170719373|ref|YP_001747061.1| DNA repair protein RadC [Pseudomonas putida W619]
 gi|229485561|sp|B1J4M1|Y186_PSEPW RecName: Full=UPF0758 protein PputW619_0186
 gi|169757376|gb|ACA70692.1| DNA repair protein RadC [Pseudomonas putida W619]
          Length = 226

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 55/84 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   +Y RE+V+R L  +A ++IL HNHPSGN  PS  D+
Sbjct: 128 LFLDSKHRPLAFEILFRGTIDRASIYPREVVRRSLMHNAAALILCHNHPSGNSEPSQDDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           +MT  +   L  +++ V DHII+G
Sbjct: 188 HMTLALKRGLALIDVRVLDHIIVG 211


>gi|240948237|ref|ZP_04752623.1| DNA repair protein RadC [Actinobacillus minor NM305]
 gi|240297276|gb|EER47817.1| DNA repair protein RadC [Actinobacillus minor NM305]
          Length = 221

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  E    GTI+   V+ RE+++  L+ +A +II+ HNHPSG   PS+AD 
Sbjct: 123 LFLDNQNRLIRTEKMFFGTINQASVHPREVIKAALKCNAAAIIIAHNHPSGECTPSEADR 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ I      ++I   DHII+GK  + SF+
Sbjct: 183 HLTRRIEMACGLVDIRFVDHIIVGKGDYFSFE 214


>gi|259906759|ref|YP_002647115.1| DNA repair protein RadC [Erwinia pyrifoliae Ep1/96]
 gi|224962381|emb|CAX53836.1| DNA repair protein RadC [Erwinia pyrifoliae Ep1/96]
 gi|283476545|emb|CAY72373.1| Glutaredoxin 3 [Erwinia pyrifoliae DSM 12163]
          Length = 223

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            F ++H ++   E+ S GT++ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 128 FFDNQHRVIHTSEMFS-GTLNSVEVHPREIVREALKRNAAALILAHNHPSGLAEPSRADR 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++TQ I+   + +NI V DH++IG+  +VSF
Sbjct: 187 DITQQIVHACSLMNIRVLDHMVIGRGEYVSF 217


>gi|121595744|ref|YP_987640.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|171769520|sp|A1WBD9|Y3450_ACISJ RecName: Full=UPF0758 protein Ajs_3450
 gi|120607824|gb|ABM43564.1| DNA replication and repair protein RadC [Acidovorax sp. JS42]
          Length = 238

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGT+    VY RE+V R L   A +++L HNHPSG+  PS AD 
Sbjct: 142 LFLDSGNRLIAMEELFRGTLTQTSVYPREVVLRALHHHAAAVVLAHNHPSGSVQPSRADE 201

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DH+I+   A +S 
Sbjct: 202 ALTQTLKAALALVDVRVLDHVIVAPGAALSM 232


>gi|311696212|gb|ADP99085.1| DNA repair protein RadC-like protein [marine bacterium HP15]
          Length = 224

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I      RGTID   VY RE+V++ LE +A ++I  HNHPSG   PS ADI
Sbjct: 128 LFLDNRHRVIQYRELFRGTIDGAAVYPREVVRQALEDNAAAVIFAHNHPSGVAEPSQADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           ++T+ +   L  ++I V DH+++G    VS   +GL
Sbjct: 188 SLTRRLKEALGLVDIRVLDHMVVGHGEVVSLAERGL 223


>gi|220932261|ref|YP_002509169.1| DNA repair protein RadC [Halothermothrix orenii H 168]
 gi|219993571|gb|ACL70174.1| DNA repair protein RadC [Halothermothrix orenii H 168]
          Length = 228

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +  D  N LIA    SRG +    V+ RE+ +  +  S+ ++ILVHNHPSG+P+PSD DI
Sbjct: 132 ILFDIKNQLIAISEISRGGLSSSIVHPREVFKEAIRRSSAAVILVHNHPSGDPSPSDEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N+T+ ++ +   L + V DHIIIG   ++S K
Sbjct: 192 NVTRRLVDSGKILGVDVLDHIIIGDGVYLSMK 223


>gi|222111947|ref|YP_002554211.1| DNA repair protein Radc [Acidovorax ebreus TPSY]
 gi|254789648|sp|B9MEH2|Y2777_DIAST RecName: Full=UPF0758 protein Dtpsy_2777
 gi|221731391|gb|ACM34211.1| DNA repair protein RadC [Acidovorax ebreus TPSY]
          Length = 238

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGT+    VY RE+V R L   A +++L HNHPSG+  PS AD 
Sbjct: 142 LFLDSGNRLIAMEELFRGTLTQTSVYPREVVLRALHHHAAAVVLAHNHPSGSVQPSRADE 201

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DH+I+   A +S 
Sbjct: 202 ALTQTLKAALALVDVRVLDHVIVAPGAALSM 232


>gi|300310517|ref|YP_003774609.1| DNA repair RadC-like protein [Herbaspirillum seropedicae SmR1]
 gi|300073302|gb|ADJ62701.1| DNA repair RadC-like protein [Herbaspirillum seropedicae SmR1]
          Length = 224

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  E   +GT+    VY RE+++  L  +A S+IL HNHPSG+P PSD D+
Sbjct: 128 LFLDVRNKLIGTEELFKGTLTQSAVYPREVIKAALRHNAASVILAHNHPSGDPEPSDHDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  ++I + DH ++      SF
Sbjct: 188 RLTAALDEALQMMDIRLLDHFVVAGTRLYSF 218


>gi|300815950|ref|ZP_07096174.1| putative DNA repair protein RadC [Escherichia coli MS 107-1]
 gi|300531879|gb|EFK52941.1| putative DNA repair protein RadC [Escherichia coli MS 107-1]
          Length = 163

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIADE    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIADETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGNQVFSF 157


>gi|294663924|ref|ZP_06729354.1| DNA repair protein radC [Xanthomonas fuscans subsp. aurantifolii
          str. ICPB 10535]
 gi|292606302|gb|EFF49523.1| DNA repair protein radC [Xanthomonas fuscans subsp. aurantifolii
          str. ICPB 10535]
          Length = 105

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 2/92 (2%)

Query: 1  LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
          +FLD KH+IL  + + S GTID   V+ R + +R L+L+A ++IL HNHPSGNP PS+AD
Sbjct: 9  VFLDNKHHILATEHLFS-GTIDGCDVHPRVVAKRALDLNAVAVILFHNHPSGNPEPSEAD 67

Query: 60 INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ++   L  L+I V DH++IG     S 
Sbjct: 68 RKVTQHLQEALGLLDIRVLDHLVIGGRQHTSL 99


>gi|119898338|ref|YP_933551.1| DNA repair protein [Azoarcus sp. BH72]
 gi|119670751|emb|CAL94664.1| DNA repair protein [Azoarcus sp. BH72]
          Length = 196

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI  E   RGT+    VY REI++R LEL A  +I  H HPSG   PS AD 
Sbjct: 100 LYLDAQNRLIRAEEAFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADE 159

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  + + L  +++ V DHI++  D  VSF
Sbjct: 160 VLTNMLKSALTLVDVRVLDHIVVAGDRAVSF 190


>gi|50119106|ref|YP_048273.1| DNA repair protein RadC [Pectobacterium atrosepticum SCRI1043]
 gi|73913734|sp|Q6DAV7|Y145_ERWCT RecName: Full=UPF0758 protein ECA0145
 gi|49609632|emb|CAG73065.1| DNA repair protein [Pectobacterium atrosepticum SCRI1043]
          Length = 221

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI+ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 125 LFLDNQHHVIRHQEMFVGTINSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I+     L I V DH++IG   FVSF
Sbjct: 185 AITEQIVKACLLLEIRVLDHLVIGHGEFVSF 215


>gi|300948028|ref|ZP_07162169.1| DNA repair protein RadC [Escherichia coli MS 116-1]
 gi|300954468|ref|ZP_07166918.1| DNA repair protein RadC [Escherichia coli MS 175-1]
 gi|300318547|gb|EFJ68331.1| DNA repair protein RadC [Escherichia coli MS 175-1]
 gi|300452423|gb|EFK16043.1| DNA repair protein RadC [Escherichia coli MS 116-1]
          Length = 224

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHCRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 218


>gi|301028397|ref|ZP_07191643.1| DNA repair protein RadC [Escherichia coli MS 196-1]
 gi|299878508|gb|EFI86719.1| DNA repair protein RadC [Escherichia coli MS 196-1]
          Length = 222

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHCRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|296100494|ref|YP_003610640.1| DNA repair protein RadC [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295054953|gb|ADF59691.1| DNA repair protein RadC [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 222

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++L+A  +IL HNHPSG   PS AD 
Sbjct: 126 IFLDNRNRVLKHSHLFSGTLSHVEVHPREIVREAIKLNAAGVILAHNHPSGCAEPSRADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I+     ++I V DH+IIG+  ++SF
Sbjct: 186 EITDRIVKCCQFMDIRVLDHLIIGRGEYLSF 216


>gi|83649174|ref|YP_437609.1| DNA repair protein [Hahella chejuensis KCTC 2396]
 gi|83637217|gb|ABC33184.1| DNA repair protein [Hahella chejuensis KCTC 2396]
          Length = 123

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  ++  RGT +   V+ REI ++ L L+A ++IL HNHPS N  PS  DI
Sbjct: 27  LFLDNQHRVIEFDLMFRGTYNESTVHTREIAKKALSLNAAAVILAHNHPSQNARPSQRDI 86

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +  TL+ L + V DH+IIG     SF
Sbjct: 87  RLTREVKRTLDLLEVRVLDHVIIGGMEEFSF 117


>gi|121594972|ref|YP_986868.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|120607052|gb|ABM42792.1| DNA repair protein RadC [Acidovorax sp. JS42]
          Length = 168

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI       GTID   V+ RE+V++ L L+A ++++ HNHPSG+P PS AD 
Sbjct: 72  LFLDTRHRLIDYVEMFHGTIDSAEVHPREVVKQALRLNAAAVVVSHNHPSGSPEPSAADR 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  +++ V DHII+  +A  SF  +GL
Sbjct: 132 ALTQRLREALGLVDVRVLDHIIVAGNATASFAERGL 167


>gi|323497063|ref|ZP_08102086.1| hypothetical protein VISI1226_16688 [Vibrio sinaloensis DSM 21326]
 gi|323317907|gb|EGA70895.1| hypothetical protein VISI1226_16688 [Vibrio sinaloensis DSM 21326]
          Length = 214

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + +I+ E   +GTID   VY RE+V+R LE +A ++I+ HNHPSG   PS +D 
Sbjct: 118 LYLDNQHRVISGESLFQGTIDAASVYPREVVKRSLEHNAAAVIIAHNHPSGVAEPSQSDR 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I   L  ++I + DH ++G    VSF
Sbjct: 178 RITRRISDALALVDIRILDHFVVGDGEIVSF 208


>gi|317050107|ref|YP_004117755.1| DNA repair protein RadC [Pantoea sp. At-9b]
 gi|316951724|gb|ADU71199.1| DNA repair protein RadC [Pantoea sp. At-9b]
          Length = 218

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           LFLD +H++L A ++ S G+I+ V V+ REIV+  L+L+A ++IL HNHPSG   PS AD
Sbjct: 122 LFLDNQHHVLQAQKMFS-GSINSVEVHPREIVREALKLNAAAVILAHNHPSGVAEPSRAD 180

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T  I    + +NI + DH++IG   F SF
Sbjct: 181 REITDKISKACSLMNIRLLDHLVIGHGEFTSF 212


>gi|241767328|ref|ZP_04765050.1| DNA repair protein RadC [Acidovorax delafieldii 2AN]
 gi|241361963|gb|EER58149.1| DNA repair protein RadC [Acidovorax delafieldii 2AN]
          Length = 237

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V R L   A +++L HNHPSG+  PS AD 
Sbjct: 141 LFLDSQNRLLAMEELFRGTLTQTSVYPREVVLRALHHQAAAVVLAHNHPSGSVAPSRADE 200

Query: 61  NMTQNIITTLNPLNIIVHDHIII--GKDAFVSFKGL 94
            +T  + TTL  +++ V DH+I+  G+   ++ KGL
Sbjct: 201 ALTHTLKTTLALVDVRVLDHVIVAPGQALSMAEKGL 236


>gi|146280868|ref|YP_001171021.1| DNA repair protein RadC [Pseudomonas stutzeri A1501]
 gi|166218790|sp|A4VGS8|Y473_PSEU5 RecName: Full=UPF0758 protein PST_0473
 gi|145569073|gb|ABP78179.1| DNA repair protein RadC [Pseudomonas stutzeri A1501]
          Length = 224

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 53/84 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV   GTID   VY R++V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDAKHRVLAFEVLFHGTIDGASVYPRQVVKRALAQNAAAVILTHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +TQ +   L  +++ V DH I+G
Sbjct: 188 QLTQRLKDALALIDVRVLDHFIVG 211


>gi|256544878|ref|ZP_05472249.1| DNA repair protein RadC [Anaerococcus vaginalis ATCC 51170]
 gi|256399377|gb|EEU12983.1| DNA repair protein RadC [Anaerococcus vaginalis ATCC 51170]
          Length = 226

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N++I+ E+ S G ++   V  RE     ++ SA S+I VHNHPSGNPNPS  D 
Sbjct: 130 ILLDTKNVIISKELISTGDLNSSIVNPRECFISAVKKSANSVIFVHNHPSGNPNPSCNDK 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++     L+I V DHIIIG + + SF+   II
Sbjct: 190 EITQRLVQAGEILDIKVLDHIIIGNNKYFSFRQENII 226


>gi|327479136|gb|AEA82446.1| DNA repair protein RadC [Pseudomonas stutzeri DSM 4166]
          Length = 224

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 53/84 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV   GTID   VY R++V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDAKHRVLAFEVLFHGTIDGASVYPRQVVKRALAQNAAAVILTHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +TQ +   L  +++ V DH I+G
Sbjct: 188 QLTQRLKDALALIDVRVLDHFIVG 211


>gi|254805054|ref|YP_003083275.1| DNA repair protein RadC [Neisseria meningitidis alpha14]
 gi|254668596|emb|CBA06141.1| DNA repair protein RadC [Neisseria meningitidis alpha14]
          Length = 225

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQSVCSFRQLGLM 224


>gi|217973526|ref|YP_002358277.1| DNA repair protein RadC [Shewanella baltica OS223]
 gi|217498661|gb|ACK46854.1| DNA repair protein RadC [Shewanella baltica OS223]
          Length = 160

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI+ E    GTID   VY RE+V+  L  +A ++I  HNHPSG P PS+AD 
Sbjct: 64  LLLDSQHRLISCEELFFGTIDAASVYPREVVKIVLHRNAAAVIFAHNHPSGMPEPSEADK 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ + T L+ +++ V DH ++G    VSF
Sbjct: 124 RITERLKTALSTIDVSVLDHFVVGHQDVVSF 154


>gi|15676925|ref|NP_274072.1| DNA repair protein RadC [Neisseria meningitidis MC58]
 gi|304387460|ref|ZP_07369651.1| DNA repair protein RadC [Neisseria meningitidis ATCC 13091]
 gi|13431810|sp|Q9JZI3|Y1038_NEIMB RecName: Full=UPF0758 protein NMB1038
 gi|7226278|gb|AAF41437.1| DNA repair protein RadC [Neisseria meningitidis MC58]
 gi|304338553|gb|EFM04672.1| DNA repair protein RadC [Neisseria meningitidis ATCC 13091]
 gi|308389364|gb|ADO31684.1| putative DNA repair protein [Neisseria meningitidis alpha710]
 gi|325128326|gb|EGC51210.1| DNA repair protein RadC [Neisseria meningitidis N1568]
 gi|325130285|gb|EGC53052.1| DNA repair protein RadC [Neisseria meningitidis OX99.30304]
 gi|325202038|gb|ADY97492.1| DNA repair protein RadC [Neisseria meningitidis M01-240149]
 gi|325204253|gb|ADY99706.1| DNA repair protein RadC [Neisseria meningitidis M01-240355]
 gi|325208209|gb|ADZ03661.1| DNA repair protein RadC [Neisseria meningitidis NZ-05/33]
          Length = 225

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQSVCSFRQLGLM 224


>gi|94311291|ref|YP_584501.1| DNA repair protein RadC [Cupriavidus metallidurans CH34]
 gi|254241444|ref|ZP_04934766.1| hypothetical protein PA2G_02139 [Pseudomonas aeruginosa 2192]
 gi|24461569|gb|AAN62140.1|AF440523_47 putative DNA repair protein RadC [Pseudomonas aeruginosa]
 gi|93355143|gb|ABF09232.1| DNA binding protein, possibly associated to lesions [Cupriavidus
           metallidurans CH34]
 gi|126194822|gb|EAZ58885.1| hypothetical protein PA2G_02139 [Pseudomonas aeruginosa 2192]
          Length = 164

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR L+L+A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINATSVYPRVVVQRVLQLNAAAVVFAHQHPSGISEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DHII+G+ A  SF
Sbjct: 128 MLTQQLQAALALIDVRVLDHIIVGQGAPFSF 158


>gi|78048960|ref|YP_365135.1| RadC family DNA repair protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78037390|emb|CAJ25135.1| RadC family DNA repair protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 187

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD KH IL A E    GTID   V+ R + +R L+L+A ++IL HNHPSGNP PS+AD
Sbjct: 91  VFLDIKHQIL-ATEHLFFGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEAD 149

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +   L+ L+I V DH++IG    +S 
Sbjct: 150 RKVTERLQKALSLLDIRVLDHLVIGGRQHISL 181


>gi|299065959|emb|CBJ37140.1| DNA repair protein radC homolog, associated with replication fork
           [Ralstonia solanacearum CMR15]
          Length = 224

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GT+    VY REI +R L  +A+++IL HNHP+G+  PS++D+
Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALHHNASALILSHNHPTGHVEPSESDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  L++ V DH+I+G+    SF
Sbjct: 188 MLTRELCRALALLDVRVLDHMIVGRAEVYSF 218


>gi|254038104|ref|ZP_04872162.1| YeeS protein [Escherichia sp. 1_1_43]
 gi|226839728|gb|EEH71749.1| YeeS protein [Escherichia sp. 1_1_43]
          Length = 163

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD+
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADL 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 157


>gi|225419747|ref|ZP_03762050.1| hypothetical protein CLOSTASPAR_06085 [Clostridium asparagiforme
           DSM 15981]
 gi|225041614|gb|EEG51860.1| hypothetical protein CLOSTASPAR_06085 [Clostridium asparagiforme
           DSM 15981]
          Length = 231

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    L+ D + SRGT++   +  RE++   L   A +++LVHNHPSG+P PS  DI
Sbjct: 135 MFLDTKQALLKDVLLSRGTVNASVLSPREVLIEALRCRAVTMVLVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N+T+ I      + I + DHI+IG   ++SF+
Sbjct: 195 NLTRRICEAGGLVGIPLIDHIVIGDLRYLSFR 226


>gi|325136246|gb|EGC58854.1| DNA repair protein RadC [Neisseria meningitidis M0579]
          Length = 225

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQSVCSFRQLGLM 224


>gi|88608186|ref|YP_506123.1| DNA repair protein RadC [Neorickettsia sennetsu str. Miyayama]
 gi|88600355|gb|ABD45823.1| DNA repair protein RadC [Neorickettsia sennetsu str. Miyayama]
          Length = 236

 Score = 77.0 bits (188), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K   LI + VQ  G  DH P+ +REI+++CL   A+++++ HNHPSGNP PS  D+
Sbjct: 140 LFLNKKYTLIREYVQELGAADHTPLCMREIIKKCLTCGASAMVIAHNHPSGNPLPSQEDL 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +      +++ + DH I+      SF
Sbjct: 200 LITGKLKKICQKVDVQLVDHFIVTPHDHFSF 230


>gi|20090827|ref|NP_616902.1| DNA repair protein RadC [Methanosarcina acetivorans C2A]
 gi|25009026|sp|Q8TPD4|Y1979_METAC RecName: Full=UPF0758 protein MA_1979
 gi|19915895|gb|AAM05382.1| DNA repair protein [Methanosarcina acetivorans C2A]
          Length = 229

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 60/92 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N ++ +EV S G+++   V+ RE+ +  L  S+ S+I+VHNHPSG+P+PS  DI
Sbjct: 132 LYLDTKNQILKEEVVSIGSLNASIVHPREVFKSALLESSASVIMVHNHPSGDPSPSREDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++     L I + DHIIIG   +VS K
Sbjct: 192 MVTEKLVEGGKLLGIDILDHIIIGDGRYVSLK 223


>gi|238794408|ref|ZP_04638019.1| DNA repair protein radC [Yersinia intermedia ATCC 29909]
 gi|238726309|gb|EEQ17852.1| DNA repair protein radC [Yersinia intermedia ATCC 29909]
          Length = 222

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +I   + L+I V DH+++G+   VSF
Sbjct: 186 LITTQVIKACSLLDIRVLDHLVVGRGECVSF 216


>gi|300703309|ref|YP_003744911.1| DNA repair protein RadC fork [Ralstonia solanacearum CFBP2957]
 gi|299070972|emb|CBJ42281.1| DNA repair protein radC homolog, associated with replication fork
           [Ralstonia solanacearum CFBP2957]
          Length = 224

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GT+    VY REI +R L  +A+++IL HNHP+G+  PS++D+
Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALYHNASAVILSHNHPTGHVEPSESDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L+ L++ V DH+I+G+    SF
Sbjct: 188 ILTRELCRALSLLDVRVLDHMIVGRAEVYSF 218


>gi|325928297|ref|ZP_08189499.1| DNA replication and repair protein RadC [Xanthomonas perforans
           91-118]
 gi|325541334|gb|EGD12874.1| DNA replication and repair protein RadC [Xanthomonas perforans
           91-118]
          Length = 243

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 146 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++ +L  ++I + DH +IG    VSF
Sbjct: 206 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSF 236


>gi|124266851|ref|YP_001020855.1| hypothetical protein Mpe_A1658 [Methylibium petroleiphilum PM1]
 gi|124259626|gb|ABM94620.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 169

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA +   RGT+    VY RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 73  LFLDAQHRIIALKQMFRGTVTQTSVYPREVVKEALACNAAAVILAHNHPSGAAEPSRADE 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + T L  +++ V DH+++      SF  L ++
Sbjct: 133 FLTQTLKTALALVDVRVLDHLVVAGAEVRSFAELGLL 169


>gi|195183362|dbj|BAG66899.1| predicted protein [Escherichia coli O111:H-]
          Length = 163

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYYNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 157


>gi|153870452|ref|ZP_01999852.1| DNA repair protein RadC [Beggiatoa sp. PS]
 gi|152073088|gb|EDN70154.1| DNA repair protein RadC [Beggiatoa sp. PS]
          Length = 242

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTID   VY RE+V+  L+ +A ++IL HNHPSG   PS+ADI
Sbjct: 146 LFLDNKHRVIKFEELFYGTIDGASVYPREVVKHTLQWNAAALILAHNHPSGVAEPSEADI 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++TQ +   L+ +++ V DH +IG    VS 
Sbjct: 206 SITQRLREALSLIDVRVLDHFVIGDGYCVSL 236


>gi|294666100|ref|ZP_06731358.1| DNA repair protein RadC [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604114|gb|EFF47507.1| DNA repair protein RadC [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 225

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++ +L  ++I + DH +IG    VSF
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSF 218


>gi|194426516|ref|ZP_03059070.1| DNA repair protein, RadC family [Escherichia coli B171]
 gi|194415255|gb|EDX31523.1| DNA repair protein, RadC family [Escherichia coli B171]
 gi|323158205|gb|EFZ44297.1| DNA repair protein RadC family protein [Escherichia coli E128010]
          Length = 158

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYYNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|78046671|ref|YP_362846.1| RadC family DNA repair protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78035101|emb|CAJ22746.1| RadC family DNA repair protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 159

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD KH+IL  + + + GT D   V+ R + +R LEL+A ++IL HNHPSGNP PS+AD
Sbjct: 63  VFLDTKHHILATEHLFT-GTTDACEVHSRVVAKRALELNAVAVILFHNHPSGNPEPSEAD 121

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +   L  L+I V DH++IG     S 
Sbjct: 122 RKVTKRLEQALGLLDIRVLDHLVIGGRQHTSL 153


>gi|21244634|ref|NP_644216.1| DNA repair protein RadC [Xanthomonas axonopodis pv. citri str. 306]
 gi|25009022|sp|Q8PFR3|Y3915_XANAC RecName: Full=UPF0758 protein XAC3915
 gi|21110318|gb|AAM38752.1| DNA repair protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 225

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++ +L  ++I + DH +IG    VSF
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSF 218


>gi|191165826|ref|ZP_03027664.1| DNA repair protein RadC [Escherichia coli B7A]
 gi|190904150|gb|EDV63861.1| DNA repair protein RadC [Escherichia coli B7A]
          Length = 157

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+  E    GTI+   V+ REIV+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T NI+ TL+ +N+ V DH IIG    +SF
Sbjct: 121 LITTNIVKTLDLVNVRVLDHFIIGAGDVLSF 151


>gi|251788567|ref|YP_003003288.1| DNA repair protein RadC [Dickeya zeae Ech1591]
 gi|271498985|ref|YP_003332010.1| DNA repair protein RadC [Dickeya dadantii Ech586]
 gi|247537188|gb|ACT05809.1| DNA repair protein RadC [Dickeya zeae Ech1591]
 gi|270342540|gb|ACZ75305.1| DNA repair protein RadC [Dickeya dadantii Ech586]
          Length = 157

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E+ + G+I+HV + IREIV+  L  +A ++IL HNHPSG+  PS  D 
Sbjct: 61  LFLDNQHRLIDREIMALGSINHVDIPIREIVKAALRHNAAAVILAHNHPSGHAEPSTPDR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ + + L  ++I   DH++IG +  VSF
Sbjct: 121 ALTERLKSALELVDIRTLDHLVIGGNQVVSF 151


>gi|134095055|ref|YP_001100130.1| putative DNA repair protein in putative prophage region (radC-like)
           [Herminiimonas arsenicoxydans]
 gi|133738958|emb|CAL62006.1| Putative DNA repair protein RadC-like [Herminiimonas
           arsenicoxydans]
          Length = 166

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+ +  LE +A ++IL HNHPSG P PS ADI
Sbjct: 70  LLLDTQHKIIGFHEMFRGTIDSTSVYPREVAKLALEHNAAAVILTHNHPSGEPTPSQADI 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I +L  + + V DHI++      S 
Sbjct: 130 KLTKVLIESLALIGVRVLDHIVVSSQGCASL 160


>gi|296313679|ref|ZP_06863620.1| DNA repair protein RadC [Neisseria polysaccharea ATCC 43768]
 gi|296839740|gb|EFH23678.1| DNA repair protein RadC [Neisseria polysaccharea ATCC 43768]
          Length = 225

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVTENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSRSVCSFRQLGLM 224


>gi|207721439|ref|YP_002251880.1| DNA repair protein RadC [Ralstonia solanacearum MolK2]
 gi|207742580|ref|YP_002258972.1| dna repair protein radc homolog [Ralstonia solanacearum IPO1609]
 gi|206586599|emb|CAQ17186.1| dna repair protein radc homolog [Ralstonia solanacearum MolK2]
 gi|206593974|emb|CAQ60901.1| dna repair protein radc homolog [Ralstonia solanacearum IPO1609]
          Length = 224

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GT+    VY REI +R L  +A+++IL HNHP+G+  PS++D+
Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALYHNASALILSHNHPTGHVEPSESDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L+ L++ V DH+I+G+    SF
Sbjct: 188 ILTRELCRALSLLDVRVLDHMIVGRAEVYSF 218


>gi|78049584|ref|YP_365759.1| DNA repair protein RadC [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|123583963|sp|Q3BNA4|Y4028_XANC5 RecName: Full=UPF0758 protein XCV4028
 gi|78038014|emb|CAJ25759.1| DNA repair protein RadC [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 225

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++ +L  ++I + DH +IG    VSF
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSF 218


>gi|90408646|ref|ZP_01216799.1| DNA repair protein RadC [Psychromonas sp. CNPT3]
 gi|90310253|gb|EAS38385.1| DNA repair protein RadC [Psychromonas sp. CNPT3]
          Length = 157

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 64/96 (66%), Gaps = 3/96 (3%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  + LI  +    GTID   +Y RE+++  L+L+A+++IL HNHPSG+  PSDADI
Sbjct: 62  MFLNSRHQLIEYKEIFHGTIDSAHIYPREMLKAVLKLNASTVILAHNHPSGSSVPSDADI 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  +++ V DH+I+G+ A  SF  KGL
Sbjct: 122 AITQRLTKALELIDVRVLDHVIVGETA-TSFAEKGL 156


>gi|188532227|ref|YP_001906024.1| DNA repair protein RadC [Erwinia tasmaniensis Et1/99]
 gi|188027269|emb|CAO95112.1| DNA repair protein RadC [Erwinia tasmaniensis Et1/99]
          Length = 223

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            F ++H ++   E+ S GT++ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 128 FFDNQHRVIHTSEMFS-GTLNSVEVHPREIVREALKRNAAALILAHNHPSGLAEPSRADR 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++TQ I+     +NI V DH++IG+  +VSF
Sbjct: 187 DITQQIVHACALMNIRVLDHMVIGRGEYVSF 217


>gi|330431915|gb|AEC16974.1| DNA repair protein RadC [Gallibacterium anatis UMN179]
          Length = 221

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + LI  E   +GTI+   V+ REI++  L+ +A +IIL HNHPSG   PS  DI
Sbjct: 122 LFLNNQHYLIEKETLFQGTINSTQVHPREIIKSALKYNAAAIILAHNHPSGITTPSKEDI 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ I      +++ V DH+IIGK+   SF  KGL
Sbjct: 182 AVTEQIQQACKLIDVRVLDHLIIGKNQVFSFCEKGL 217


>gi|283787728|ref|YP_003367593.1| DNA repair protein [Citrobacter rodentium ICC168]
 gi|282951182|emb|CBG90875.1| DNA repair protein [Citrobacter rodentium ICC168]
          Length = 221

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT+ HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 125 IFLDTQHKVIKHSRLFSGTLSHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I     ++I V DH++IG+  +VSF
Sbjct: 185 LITERVIKCCQFMDIRVLDHLVIGRGEYVSF 215


>gi|119475390|ref|ZP_01615743.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2143]
 gi|119451593|gb|EAW32826.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2143]
          Length = 224

 Score = 76.6 bits (187), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA +    GTID   +Y RE+V+ C++ +A ++I  HNHPSG   PS AD 
Sbjct: 128 LFLDSQHRVIAFDTLFYGTIDAACIYPREVVRCCMQHNAAAVIFAHNHPSGIAEPSQADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +I  L  +++ V DH ++G    VSF  +GL
Sbjct: 188 QITRRLIDALVLIDVRVLDHFVVGDGVLVSFAERGL 223


>gi|17547163|ref|NP_520565.1| DNA repair protein RadC [Ralstonia solanacearum GMI1000]
 gi|25009031|sp|Q8XWN0|Y2444_RALSO RecName: Full=UPF0758 protein RSc2444
 gi|17429465|emb|CAD16151.1| probable dna repair protein radc homolog [Ralstonia solanacearum
           GMI1000]
          Length = 224

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GT+    VY REI +R L  +A+++IL HNHP+G+  PS++D+
Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALHHNASALILSHNHPTGHVEPSESDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  L++ V DH+I+G+    SF
Sbjct: 188 VLTRELCRALALLDVRVLDHMIVGRAEVYSF 218


>gi|188992052|ref|YP_001904062.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris str. B100]
 gi|325915422|ref|ZP_08177736.1| DNA repair protein radc [Xanthomonas vesicatoria ATCC 35937]
 gi|167733812|emb|CAP52018.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris]
 gi|325538304|gb|EGD09986.1| DNA repair protein radc [Xanthomonas vesicatoria ATCC 35937]
          Length = 159

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  +++I+ E    GTID   V+ R + +  LEL+A ++IL HNHPSGNP PS AD 
Sbjct: 63  VFLDNQHLIISTEHLFSGTIDGCEVHPRVVAKLALELNAVAVILFHNHPSGNPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  L+I V DH++IG    VS 
Sbjct: 123 QVTKRLQEALGLLDIRVIDHLVIGGRQHVSL 153


>gi|209947531|ref|YP_002291028.1| putative DNA repair-like protein [Haemophilus influenzae]
 gi|51507273|emb|CAF29022.1| putative DNA repair-like protein [Haemophilus influenzae]
          Length = 156

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ + LI  EV  +G++  + V IREI+++ L+L+A++II+ HNHP+GN  PSDAD 
Sbjct: 60  LFLDRMHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      + I + DH I+   A   F
Sbjct: 120 YITKRLKEACELMEIKLLDHFIVSGSASFCF 150


>gi|212712581|ref|ZP_03320709.1| hypothetical protein PROVALCAL_03676 [Providencia alcalifaciens DSM
           30120]
 gi|212684797|gb|EEB44325.1| hypothetical protein PROVALCAL_03676 [Providencia alcalifaciens DSM
           30120]
          Length = 221

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + +I  E   +GTI+ V V+ REI++  + ++A++I+L HNHPSGNP PS AD 
Sbjct: 125 LFLNNQHQVICHEEMFKGTINRVEVHPREILRFAMRMNASAIVLAHNHPSGNPEPSMADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I    + + I + DH ++G  + +SF
Sbjct: 185 YVTEQIQGACDVMGIKLLDHFVVGHKSCISF 215


>gi|313899428|ref|ZP_07832938.1| DNA repair protein RadC [Clostridium sp. HGF2]
 gi|312955716|gb|EFR37374.1| DNA repair protein RadC [Clostridium sp. HGF2]
          Length = 229

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N LI+  V   GT+ +  V+ REI +  ++L    I+ VHNHPSG+P PS ADI
Sbjct: 128 LFLNQKNQLISSRVMFVGTLTNASVHPREIFREAMQLGCAKILCVHNHPSGDPQPSSADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           ++T++I        I + DHII+ ++ + SF  KGL
Sbjct: 188 SLTRSIEECGVMTAIPLMDHIIVSRNTYFSFAQKGL 223


>gi|309776893|ref|ZP_07671863.1| DNA repair protein RadC [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915304|gb|EFP61074.1| DNA repair protein RadC [Erysipelotrichaceae bacterium 3_1_53]
          Length = 229

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N LIA  V   GT+ +  V+ REI +  ++L    I+ VHNHPSG+P PS ADI
Sbjct: 128 LFLNQKNQLIASRVMFVGTLTNASVHPREIFKEAMQLGCAKILCVHNHPSGDPQPSSADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           ++T++I        I + DHII+ ++ + SF  KG+
Sbjct: 188 SLTKSIEECGVMTAIPLIDHIIVSRNTYFSFAQKGM 223


>gi|154253862|ref|YP_001414686.1| DNA repair protein RadC [Parvibaculum lavamentivorans DS-1]
 gi|154157812|gb|ABS65029.1| DNA repair protein RadC [Parvibaculum lavamentivorans DS-1]
          Length = 164

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  + ++A E   RGTI+   V+ R IVQR LEL+A ++IL H HPSG   PS AD 
Sbjct: 68  VFMDSLHQVLAYEPMFRGTINSATVHARVIVQRALELNAAAVILSHQHPSGATEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DHII+G+    SF
Sbjct: 128 ALTQQLQAALALIDVRVLDHIIVGQGIPYSF 158


>gi|121634962|ref|YP_975207.1| DNA repair protein RadC [Neisseria meningitidis FAM18]
 gi|166218786|sp|A1KU78|Y1174_NEIMF RecName: Full=UPF0758 protein NMC1174
 gi|120866668|emb|CAM10420.1| putative DNA repair protein [Neisseria meningitidis FAM18]
 gi|325132546|gb|EGC55239.1| DNA repair protein RadC [Neisseria meningitidis M6190]
 gi|325198403|gb|ADY93859.1| DNA repair protein RadC [Neisseria meningitidis G2136]
          Length = 225

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQSVRSFRQLGLM 224


>gi|321272297|gb|ADW80182.1| putative DNA repair protein RadC [Wolbachia endosymbiont wVitA of
           Nasonia vitripennis phage WOVitA1]
 gi|321272349|gb|ADW80230.1| putative DNA repair protein RadC [Wolbachia endosymbiont wVitB of
           Nasonia vitripennis phage WOVitB]
          Length = 221

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++ D+   L  +EV + GT+D VP YIRE+ ++ L   ATSII+ HNHP G   PSD D 
Sbjct: 126 IYFDQKCRLKGEEVFT-GTVDKVPFYIREVTRKALIRKATSIIISHNHPEGRLKPSDEDE 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+++      + I + DHIII    + SFK
Sbjct: 185 AVTKDLAKACQTIGIRLMDHIIITSVGYFSFK 216


>gi|254515838|ref|ZP_05127898.1| DNA repair protein RadC family [gamma proteobacterium NOR5-3]
 gi|219675560|gb|EED31926.1| DNA repair protein RadC family [gamma proteobacterium NOR5-3]
          Length = 224

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           LFLD +H +L  D++   GT+D   VY RE+V R L+  A +IIL HNHPSG   PS AD
Sbjct: 128 LFLDSQHRLLHCDDL-FLGTLDGAAVYPREVVVRALQYRAAAIILAHNHPSGLTQPSTAD 186

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +TQ +   L  +++ V DH+I+G+    SF
Sbjct: 187 RRITQRLCDALALVDVPVLDHVIVGRGKCYSF 218


>gi|15801143|ref|NP_287160.1| RadC family DNA repair protein [Escherichia coli O157:H7 EDL933]
 gi|12514552|gb|AAG55772.1|AE005313_7 putative DNA repair protein, RADC family [Escherichia coli O157:H7
           str. EDL933]
          Length = 158

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETXFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|229593348|ref|YP_002875467.1| DNA repair protein RadC [Pseudomonas fluorescens SBW25]
 gi|259551894|sp|C3K471|Y5982_PSEFS RecName: Full=UPF0758 protein PFLU_5982
 gi|229365214|emb|CAY53505.1| DNA repair protein [Pseudomonas fluorescens SBW25]
          Length = 224

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 55/84 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E  S+GTID   VY R++V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 128 LFLDSRHRVLGFEALSQGTIDAAMVYPRQVVKRALAYNAAALILCHNHPSGSLEPSAADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T+ +   L  +++ V DHII+G
Sbjct: 188 KLTKLLQKALEVVDVRVLDHIIVG 211


>gi|167035736|ref|YP_001670967.1| DNA repair protein RadC [Pseudomonas putida GB-1]
 gi|166862224|gb|ABZ00632.1| DNA repair protein RadC [Pseudomonas putida GB-1]
          Length = 162

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGT+D   VY RE+V+  LE +A ++I+VHNHPSG+P PS AD 
Sbjct: 66  LLLDSKHRVIGFRELFRGTLDGASVYPREVVKIALEHNAAAVIMVHNHPSGDPEPSQADR 125

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   LN +   + DH+++G +  VS 
Sbjct: 126 TLTTTLKNALNMVGTRILDHVVVGHEGCVSL 156


>gi|254478306|ref|ZP_05091686.1| DNA repair protein RadC [Carboxydibrachium pacificum DSM 12653]
 gi|214035771|gb|EEB76465.1| DNA repair protein RadC [Carboxydibrachium pacificum DSM 12653]
          Length = 228

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E SA+SIILVHNHPSG+P PS  D+
Sbjct: 134 VMLNVKNKIIAIETISIGSLNTSIVHPREVFKAAIERSASSIILVHNHPSGDPTPSRGDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++   N L I V DH+IIG    +S K
Sbjct: 194 EVTKRLVEAGNILGIKVLDHVIIGDGRGISLK 225


>gi|77163771|ref|YP_342296.1| DNA repair protein RadC [Nitrosococcus oceani ATCC 19707]
 gi|123595151|sp|Q3JEI0|Y236_NITOC RecName: Full=UPF0758 protein Noc_0236
 gi|76882085|gb|ABA56766.1| DNA replication and repair protein RadC [Nitrosococcus oceani ATCC
           19707]
          Length = 224

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A E   RGTID   V+ RE+++R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNRHRVLAFEELFRGTIDGASVHPREVLKRALAHNAAAVILAHNHPSGVAEPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  ++I V DHII+G    +SF  +GL
Sbjct: 188 CITQRLKEALALVDIRVLDHIIVGDGETLSFAERGL 223


>gi|145639535|ref|ZP_01795139.1| putative DNA repair radC-like protein [Haemophilus influenzae
           PittII]
 gi|145271326|gb|EDK11239.1| putative DNA repair radC-like protein [Haemophilus influenzae
           PittII]
          Length = 156

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ + LI  EV  +G++  + V IREI+++ L+L+A++II+ HNHP+GN  PSDAD 
Sbjct: 60  LFLDRTHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      + I + DH I+   A   F
Sbjct: 120 YVTKRLKEACELMEIKLLDHFIVSGSASFCF 150


>gi|222839521|gb|EEE77858.1| predicted protein [Populus trichocarpa]
          Length = 226

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 54/93 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGT+    VY RE+V R L   A ++IL HNHPSG    S AD 
Sbjct: 130 LFLDSQHRLIALEEMFRGTLTRTSVYPREVVLRALHHHAGAVILAHNHPSGQVQASAADK 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +TQ++   L  ++I V DH+I+   A +S  G
Sbjct: 190 AVTQSLQAALGLVDIQVLDHVIVAPGASLSMAG 222


>gi|94499761|ref|ZP_01306297.1| DNA repair protein RadC [Oceanobacter sp. RED65]
 gi|94427962|gb|EAT12936.1| DNA repair protein RadC [Oceanobacter sp. RED65]
          Length = 223

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LIA E   RGTID   VY RE+V++ L  +A ++I  HNHPSG   PSD+DI
Sbjct: 128 LYLDNQHRLIAFEELFRGTIDGASVYPREVVKQVLAHNAAAVIFAHNHPSGIAEPSDSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DH ++G D  +SF
Sbjct: 188 RITKRLQDALALVDVRVLDHFVVG-DEVISF 217


>gi|325138320|gb|EGC60889.1| DNA repair protein RadC [Neisseria meningitidis ES14902]
 gi|325142461|gb|EGC64865.1| DNA repair protein RadC [Neisseria meningitidis 961-5945]
          Length = 209

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 112 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 171

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 172 MFTRRLAQAMSLVDVSLLDHFIVTSQSVRSFRQLGLM 208


>gi|309378585|emb|CBX22763.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 225

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LI     SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS ADI
Sbjct: 128 LLLNRQNRLIGVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSHADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+      SF+ L ++
Sbjct: 188 AFTRRLAQAMSLVDVSLLDHFIVTSQTVCSFRQLGLM 224


>gi|261400629|ref|ZP_05986754.1| DNA repair protein RadC [Neisseria lactamica ATCC 23970]
 gi|313668384|ref|YP_004048668.1| DNA repair protein [Neisseria lactamica ST-640]
 gi|269209535|gb|EEZ75990.1| DNA repair protein RadC [Neisseria lactamica ATCC 23970]
 gi|313005846|emb|CBN87302.1| putative DNA repair protein [Neisseria lactamica 020-06]
          Length = 225

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LI     SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS ADI
Sbjct: 128 LLLNRQNRLIGVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSHADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+      SF+ L ++
Sbjct: 188 AFTRRLAQAMSLVDVSLLDHFIVTSQTVCSFRQLGLM 224


>gi|254436013|ref|ZP_05049520.1| DNA repair protein RadC [Nitrosococcus oceani AFC27]
 gi|207089124|gb|EDZ66396.1| DNA repair protein RadC [Nitrosococcus oceani AFC27]
          Length = 230

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A E   RGTID   V+ RE+++R L  +A ++IL HNHPSG   PS AD 
Sbjct: 134 LFLDNRHRVLAFEELFRGTIDGASVHPREVLKRALAHNAAAVILAHNHPSGVAEPSRADE 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  ++I V DHII+G    +SF  +GL
Sbjct: 194 CITQRLKEALALVDIRVLDHIIVGDGETLSFAERGL 229


>gi|21231072|ref|NP_636989.1| RadC family protein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66768919|ref|YP_243681.1| RadC family protein [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21112702|gb|AAM40913.1| RadC family protein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66574251|gb|AAY49661.1| RadC family protein [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 159

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD KH+IL  + + S GTID   V+ R + +R L+L+A ++IL HNHPSGNP PS+AD
Sbjct: 63  VFLDTKHHILATEHLFS-GTIDGCDVHPRVVAKRALDLNAVAVILFHNHPSGNPEPSEAD 121

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +   L  L+I V DH++IG     S 
Sbjct: 122 RKVTERLKQALALLDIRVLDHLVIGGRQHTSL 153


>gi|73542417|ref|YP_296937.1| DNA repair protein RadC [Ralstonia eutropha JMP134]
 gi|123624203|sp|Q46XP0|Y2732_RALEJ RecName: Full=UPF0758 protein Reut_A2732
 gi|72119830|gb|AAZ62093.1| DNA repair protein RadC [Ralstonia eutropha JMP134]
          Length = 228

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 53/84 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +IA E   RGT++   VY RE+ +R L  +A S+I+ HNHPSG   PS +D+
Sbjct: 128 LFLDTRNRMIASEELFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCCTPSQSDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            MT+ +   L+ +++ + DH ++ 
Sbjct: 188 QMTRMLARALDLIDVRLLDHFVVA 211


>gi|304407507|ref|ZP_07389159.1| DNA repair protein RadC [Paenibacillus curdlanolyticus YK9]
 gi|304343458|gb|EFM09300.1| DNA repair protein RadC [Paenibacillus curdlanolyticus YK9]
          Length = 229

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++A ++ S GT++   V+ RE+ +  ++ S+ SII  HNHPSG+P PS  DI
Sbjct: 133 LFLNTKNQVVAKDMLSVGTLNASLVHPREVFREAIKRSSASIICAHNHPSGDPTPSPEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ +      + I V DH+IIG   FVS K
Sbjct: 193 SLTRRLAEAGELIGIEVLDHLIIGDGKFVSLK 224


>gi|258645224|ref|ZP_05732693.1| DNA repair protein RadC [Dialister invisus DSM 15470]
 gi|260402574|gb|EEW96121.1| DNA repair protein RadC [Dialister invisus DSM 15470]
          Length = 227

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 53/89 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FL+  N L+  +    G++D  PV I+E ++  L   A  +ILVHNHPSG P PSDADIN
Sbjct: 132 FLNTKNRLLGYKEICVGSLDAAPVDIKEAMRWALRFKAHGMILVHNHPSGYPEPSDADIN 191

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
           +T+      +  +I + DH+IIG   F S
Sbjct: 192 LTRQFRRATSFFDIRLLDHVIIGDGEFAS 220


>gi|256003755|ref|ZP_05428743.1| DNA repair protein RadC [Clostridium thermocellum DSM 2360]
 gi|255992316|gb|EEU02410.1| DNA repair protein RadC [Clostridium thermocellum DSM 2360]
 gi|316940493|gb|ADU74527.1| DNA repair protein RadC [Clostridium thermocellum DSM 1313]
          Length = 224

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 54/94 (57%), Gaps = 2/94 (2%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +   E+   GTI+  PVY R IV+  L   A S+IL HNHP G  NPS ADI  
Sbjct: 128 LDAQNRVNYAELVHEGTINEAPVYPRIIVETALRHKANSVILAHNHPGGTLNPSKADIEA 187

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           T+ I   L  ++I V DHII+    +VSF  KGL
Sbjct: 188 TKRIKAALEAISIKVVDHIIVCGGQYVSFAEKGL 221


>gi|300690691|ref|YP_003751686.1| DNA repair protein radC homolog, associated with replication fork
           [Ralstonia solanacearum PSI07]
 gi|299077751|emb|CBJ50389.1| DNA repair protein radC homolog, associated with replication fork
           [Ralstonia solanacearum PSI07]
          Length = 224

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GT+    VY REI +R L  +A+++IL HNHP+G+  PS++D+
Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALYHNASAVILSHNHPTGHVEPSESDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  L++ + DH+I+G+    SF
Sbjct: 188 MLTRELCRALALLDVRILDHMIVGRTQVYSF 218


>gi|73669792|ref|YP_305807.1| DNA repair protein RadC [Methanosarcina barkeri str. Fusaro]
 gi|121729469|sp|Q46A65|Y2303_METBF RecName: Full=UPF0758 protein Mbar_A2303
 gi|72396954|gb|AAZ71227.1| DNA replication and repair protein RadC [Methanosarcina barkeri
           str. Fusaro]
          Length = 229

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 60/92 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++ +EV S G+++   V+ RE+ +  L  S+ S+I++HNHPSG+P+PS  DI
Sbjct: 132 LCLDTKNQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMIHNHPSGDPSPSREDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++     L I V DHIIIG+  +VS K
Sbjct: 192 MVTEKMVEGGKLLGIDVLDHIIIGEGRYVSLK 223


>gi|125973275|ref|YP_001037185.1| DNA repair protein RadC [Clostridium thermocellum ATCC 27405]
 gi|281417478|ref|ZP_06248498.1| DNA repair protein RadC [Clostridium thermocellum JW20]
 gi|125713500|gb|ABN51992.1| DNA repair protein RadC [Clostridium thermocellum ATCC 27405]
 gi|281408880|gb|EFB39138.1| DNA repair protein RadC [Clostridium thermocellum JW20]
          Length = 223

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 54/94 (57%), Gaps = 2/94 (2%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +   E+   GTI+  PVY R IV+  L   A S+IL HNHP G  NPS ADI  
Sbjct: 127 LDAQNRVNYAELVHEGTINEAPVYPRIIVETALRHKANSVILAHNHPGGTLNPSKADIEA 186

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           T+ I   L  ++I V DHII+    +VSF  KGL
Sbjct: 187 TKRIKAALEAISIKVVDHIIVCGGQYVSFAEKGL 220


>gi|193069504|ref|ZP_03050458.1| DNA repair protein, RadC family [Escherichia coli E110019]
 gi|192957252|gb|EDV87701.1| DNA repair protein, RadC family [Escherichia coli E110019]
          Length = 158

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A++++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNASAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|83648279|ref|YP_436714.1| DNA repair protein [Hahella chejuensis KCTC 2396]
 gi|83636322|gb|ABC32289.1| DNA repair protein [Hahella chejuensis KCTC 2396]
          Length = 183

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 54/93 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA EV  RG ID   +Y RE+V+  L  +A  +I+ HNHPSG+P PS  D 
Sbjct: 75  LFLDTQNRLIAYEVLFRGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQ 134

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T  ++  L  + I + DH ++G D  VS   
Sbjct: 135 LITYRLLQALMLVEIPLIDHFVVGGDQVVSMAA 167


>gi|311104314|ref|YP_003977167.1| DNA repair protein RadC 1 [Achromobacter xylosoxidans A8]
 gi|310759003|gb|ADP14452.1| DNA repair protein RadC 1 [Achromobacter xylosoxidans A8]
          Length = 164

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R + QR LEL+A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINSTSVYPRVVAQRVLELNAAAVVFSHQHPSGISEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DHII+G+ A  SF
Sbjct: 128 MLTQQLQVALALIDVRVLDHIIVGQGAPFSF 158


>gi|167036321|ref|YP_001671552.1| DNA repair protein RadC [Pseudomonas putida GB-1]
 gi|189029399|sp|B0KQ87|Y5335_PSEPG RecName: Full=UPF0758 protein PputGB1_5335
 gi|166862809|gb|ABZ01217.1| DNA repair protein RadC [Pseudomonas putida GB-1]
          Length = 226

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 56/84 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   VY RE+V+R L  +A ++IL HNHPSG+  PS  D+
Sbjct: 128 LFLDSKHRPLAFEILFRGTIDRASVYPREVVRRALLHNAAALILCHNHPSGSSEPSQDDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           ++T ++   L  +++ V DHIIIG
Sbjct: 188 HLTLSLKRGLALIDVRVLDHIIIG 211


>gi|170680081|ref|YP_001743141.1| RadC family DNA repair protein [Escherichia coli SMS-3-5]
 gi|170517799|gb|ACB15977.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5]
          Length = 158

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADC 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|114321811|ref|YP_743494.1| DNA repair protein RadC [Alkalilimnicola ehrlichii MLHE-1]
 gi|122310756|sp|Q0A583|Y2664_ALHEH RecName: Full=UPF0758 protein Mlg_2664
 gi|114228205|gb|ABI58004.1| DNA replication and repair protein RadC [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 224

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E   +GTID   VY RE+VQR L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNRHRVVRYEELFQGTIDAASVYPREVVQRALAHNAAAVILAHNHPSGVAEPSVADQ 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L  ++I V DH ++G    VSF  +GL
Sbjct: 188 ALTRRLQEALGLVDIRVLDHFVVGDGRPVSFAERGL 223


>gi|22124012|ref|NP_667435.1| DNA repair protein RadC [Yersinia pestis KIM 10]
 gi|45439915|ref|NP_991454.1| DNA repair protein RadC [Yersinia pestis biovar Microtus str.
           91001]
 gi|51594404|ref|YP_068595.1| DNA repair protein RadC [Yersinia pseudotuberculosis IP 32953]
 gi|108809484|ref|YP_653400.1| DNA repair protein RadC [Yersinia pestis Antiqua]
 gi|108813961|ref|YP_649728.1| DNA repair protein RadC [Yersinia pestis Nepal516]
 gi|145601096|ref|YP_001165172.1| DNA repair protein RadC [Yersinia pestis Pestoides F]
 gi|150260887|ref|ZP_01917615.1| putative DNA repair protein [Yersinia pestis CA88-4125]
 gi|153948496|ref|YP_001399062.1| DNA repair protein RadC [Yersinia pseudotuberculosis IP 31758]
 gi|162421088|ref|YP_001604695.1| DNA repair protein RadC [Yersinia pestis Angola]
 gi|165926061|ref|ZP_02221893.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165936188|ref|ZP_02224757.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011487|ref|ZP_02232385.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213687|ref|ZP_02239722.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167402113|ref|ZP_02307590.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167418902|ref|ZP_02310655.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167426676|ref|ZP_02318429.1| DNA repair protein RadC [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170026362|ref|YP_001722867.1| DNA repair protein RadC [Yersinia pseudotuberculosis YPIII]
 gi|186893392|ref|YP_001870504.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+]
 gi|218927270|ref|YP_002345145.1| DNA repair protein RadC [Yersinia pestis CO92]
 gi|229836162|ref|ZP_04456330.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis Pestoides A]
 gi|229839898|ref|ZP_04460057.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229841980|ref|ZP_04462135.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229904491|ref|ZP_04519602.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis Nepal516]
 gi|270488490|ref|ZP_06205564.1| DNA repair protein RadC [Yersinia pestis KIM D27]
 gi|294502156|ref|YP_003566218.1| DNA repair protein RadC [Yersinia pestis Z176003]
 gi|25009034|sp|Q8ZJP3|Y049_YERPE RecName: Full=UPF0758 protein YPO0049/y0092/YP_0050
 gi|73913745|sp|Q66GD6|Y046_YERPS RecName: Full=UPF0758 protein YPTB0046
 gi|123245478|sp|Q1C267|Y3493_YERPA RecName: Full=UPF0758 protein YPA_3493
 gi|123372833|sp|Q1CD02|Y3801_YERPN RecName: Full=UPF0758 protein YPN_3801
 gi|166218801|sp|A4TSD7|Y3856_YERPP RecName: Full=UPF0758 protein YPDSF_3856
 gi|166918668|sp|A7FCT4|Y061_YERP3 RecName: Full=UPF0758 protein YpsIP31758_0061
 gi|238687317|sp|A9R674|Y055_YERPG RecName: Full=UPF0758 protein YpAngola_A0055
 gi|238688492|sp|B1JQX3|Y4155_YERPY RecName: Full=UPF0758 protein YPK_4155
 gi|238691334|sp|B2JYN3|Y048_YERPB RecName: Full=UPF0758 protein YPTS_0048
 gi|21956754|gb|AAM83686.1|AE013609_11 DNA repair protein [Yersinia pestis KIM 10]
 gi|45434770|gb|AAS60331.1| putative DNA repair protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51587686|emb|CAH19286.1| putative DNA repair protein [Yersinia pseudotuberculosis IP 32953]
 gi|108777609|gb|ABG20128.1| DNA repair protein [Yersinia pestis Nepal516]
 gi|108781397|gb|ABG15455.1| putative DNA repair protein [Yersinia pestis Antiqua]
 gi|115345881|emb|CAL18739.1| putative DNA repair protein [Yersinia pestis CO92]
 gi|145212792|gb|ABP42199.1| DNA repair protein [Yersinia pestis Pestoides F]
 gi|149290295|gb|EDM40372.1| putative DNA repair protein [Yersinia pestis CA88-4125]
 gi|152959991|gb|ABS47452.1| DNA repair protein RadC [Yersinia pseudotuberculosis IP 31758]
 gi|162353903|gb|ABX87851.1| DNA repair protein RadC [Yersinia pestis Angola]
 gi|165915802|gb|EDR34410.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921921|gb|EDR39098.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989633|gb|EDR41934.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205089|gb|EDR49569.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962896|gb|EDR58917.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048488|gb|EDR59896.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167054365|gb|EDR64182.1| DNA repair protein RadC [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169752896|gb|ACA70414.1| DNA repair protein RadC [Yersinia pseudotuberculosis YPIII]
 gi|186696418|gb|ACC87047.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+]
 gi|229678609|gb|EEO74714.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis Nepal516]
 gi|229690290|gb|EEO82344.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229696264|gb|EEO86311.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229706610|gb|EEO92616.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis Pestoides A]
 gi|262360235|gb|ACY56956.1| DNA repair protein RadC [Yersinia pestis D106004]
 gi|262364182|gb|ACY60739.1| DNA repair protein RadC [Yersinia pestis D182038]
 gi|270336994|gb|EFA47771.1| DNA repair protein RadC [Yersinia pestis KIM D27]
 gi|294352615|gb|ADE62956.1| DNA repair protein RadC [Yersinia pestis Z176003]
 gi|320013403|gb|ADV96974.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 222

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 126 VFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +I   + L+I V DH+++G+   VSF
Sbjct: 186 LITTQVIKACSLLDIRVLDHLVVGRGECVSF 216


>gi|83648347|ref|YP_436782.1| DNA repair protein [Hahella chejuensis KCTC 2396]
 gi|83636390|gb|ABC32357.1| DNA repair protein [Hahella chejuensis KCTC 2396]
          Length = 183

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 54/93 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA EV  RG ID   +Y RE+V+  L  +A  +I+ HNHPSG+P PS  D 
Sbjct: 75  LFLDTQNRLIAYEVLFRGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQ 134

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T  ++  L  + I + DH ++G D  VS   
Sbjct: 135 LITYRLLQALMLVEIPLIDHFVVGGDQVVSMAA 167


>gi|320179974|gb|EFW54916.1| DNA repair protein RadC [Shigella boydii ATCC 9905]
          Length = 222

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS A  
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAGK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+  +VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSF 216


>gi|251798399|ref|YP_003013130.1| DNA repair protein RadC [Paenibacillus sp. JDR-2]
 gi|247546025|gb|ACT03044.1| DNA repair protein RadC [Paenibacillus sp. JDR-2]
          Length = 228

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +IA E  S GT++   V+ RE+ +  ++  + SII VHNHPSG+P PS  DI
Sbjct: 132 LFLNTKNHIIARETLSVGTLNASLVHPREVFRAAVKAGSASIICVHNHPSGDPMPSPEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++     + I V DH++IG   F+S K
Sbjct: 192 TLTKRLVEAGELMGIEVLDHLVIGDGRFISLK 223


>gi|254303275|ref|ZP_04970633.1| DNA repair protein RadC [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323467|gb|EDK88717.1| DNA repair protein RadC [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 232

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L   N +I  E  S GT+D   VY REI ++ + L+A SIIL HNHPS N  PS  DI
Sbjct: 136 LYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKIINLNAKSIILAHNHPSDNITPSKCDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I   L     ++ +HIII K+++ SF
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSF 226


>gi|309783369|ref|ZP_07678079.1| DNA repair protein RadC-like protein [Ralstonia sp. 5_7_47FAA]
 gi|308917913|gb|EFP63600.1| DNA repair protein RadC-like protein [Ralstonia sp. 5_7_47FAA]
          Length = 164

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I      RGT+    VY RE+V+  L L+A ++I  HNHPSG P PS AD 
Sbjct: 68  IFLDAQNRVIEYIELFRGTLTQTSVYPREVVKTSLRLNAAAVIFAHNHPSGVPEPSRADE 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           N+T+ +   L  +++ V DH+I+   A VSF  +GL
Sbjct: 128 NLTKVLKDALALVDVRVLDHVIVAGGASVSFAQRGL 163


>gi|238754770|ref|ZP_04616122.1| DNA repair protein radC [Yersinia ruckeri ATCC 29473]
 gi|238707078|gb|EEP99443.1| DNA repair protein radC [Yersinia ruckeri ATCC 29473]
          Length = 222

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 126 MFLDNQHRVIRHEEMFTGTITSVEVHPREIVREALKINAVALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  ++   + L+I V DH+++G+   VSF
Sbjct: 186 LITAQVVKACSLLDIRVLDHLVVGRGECVSF 216


>gi|281179100|dbj|BAI55430.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 163

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 157


>gi|261341753|ref|ZP_05969611.1| hypothetical protein ENTCAN_08232 [Enterobacter cancerogenus ATCC
           35316]
 gi|288316121|gb|EFC55059.1| DNA repair protein RadC [Enterobacter cancerogenus ATCC 35316]
          Length = 221

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++++A  +IL HNHPSG   PS AD 
Sbjct: 125 IFLDNKNRVLKHCHLFSGTLSHVEVHPREIVREAIKVNAAGVILAHNHPSGCAEPSRADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II     ++I V DH+IIG+  ++SF
Sbjct: 185 EITKRIIKCCQIMDIRVLDHLIIGRGEYLSF 215


>gi|169831623|ref|YP_001717605.1| DNA repair protein RadC [Candidatus Desulforudis audaxviator
           MP104C]
 gi|229485551|sp|B1I4S0|Y1467_DESAP RecName: Full=UPF0758 protein Daud_1467
 gi|169638467|gb|ACA59973.1| DNA repair protein RadC [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 230

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N ++A E  S GT++   V+ RE+ +  +  SA ++ILVHNHPSG+P PS  DI
Sbjct: 134 LVLNTKNRVLAVEKVSVGTLNSSSVHPRELFKNAIRRSAAALILVHNHPSGDPAPSPQDI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +TQ +      + I V DHIIIG + F S K
Sbjct: 194 ELTQRLFEAGEIVGIKVLDHIIIGDNKFTSLK 225


>gi|157373074|ref|YP_001481063.1| DNA repair protein RadC [Serratia proteamaculans 568]
 gi|172047792|sp|A8GLE5|Y4842_SERP5 RecName: Full=UPF0758 protein Spro_4842
 gi|157324838|gb|ABV43935.1| DNA repair protein RadC [Serratia proteamaculans 568]
          Length = 227

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI  V VY REIV+  L+ +A +IIL HNHPSG   PS AD 
Sbjct: 131 LFLDNQHRVIRHQEMFAGTISSVVVYPREIVREALKANAAAIILAHNHPSGKAEPSHADR 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++     L I V DH++IG+   VSF
Sbjct: 191 LITEQVVNACLLLEIRVLDHLVIGRGECVSF 221


>gi|37680435|ref|NP_935044.1| DNA repair protein [Vibrio vulnificus YJ016]
 gi|37199183|dbj|BAC95015.1| DNA repair protein [Vibrio vulnificus YJ016]
          Length = 184

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI  +   RGT+D   VY RE+V+  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 89  LLLDNQHRLIEFKELFRGTVDAANVYPREVVKEALHVNAAAVIFAHNHPSGDPEPSQADK 148

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L+ ++I V DH+++G ++ VSF
Sbjct: 149 RITERLKDALSLVDIRVLDHVVVG-ESCVSF 178


>gi|21233283|ref|NP_639200.1| DNA repair protein RadC [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66770241|ref|YP_245003.1| DNA repair protein RadC [Xanthomonas campestris pv. campestris str.
           8004]
 gi|25009021|sp|Q8P456|Y3860_XANCP RecName: Full=UPF0758 protein XCC3860
 gi|81303811|sp|Q4UPP0|Y3944_XANC8 RecName: Full=UPF0758 protein XC_3944
 gi|21115121|gb|AAM43091.1| DNA repair protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66575573|gb|AAY50983.1| DNA repair protein [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 225

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++++ HNHPSGNP PS+AD 
Sbjct: 128 LFLDSRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ ++  L  ++I + DH +IG    VS 
Sbjct: 188 AVTQRLLQALGLVDIRLLDHFVIGDGRPVSL 218


>gi|15603017|ref|NP_246089.1| DNA repair protein RadC [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431801|sp|P57913|Y1152_PASMU RecName: Full=UPF0758 protein PM1152
 gi|12721500|gb|AAK03236.1| RadC [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 224

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   ++ REI++  L  +A ++IL HNHPSGNP PS +D 
Sbjct: 128 LFLDNQHRLIKQEEMFLGTINCTTIHPREIIKSALFCNAAALILAHNHPSGNPEPSASDK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      + I + DH +IGK  + SF   R++
Sbjct: 188 MVTTKIQAAAELVEIRILDHFVIGKGCYYSFAENRLL 224


>gi|221235698|ref|YP_002518135.1| DNA repair protein RadC [Caulobacter crescentus NA1000]
 gi|220964871|gb|ACL96227.1| DNA repair protein radC [Caulobacter crescentus NA1000]
          Length = 221

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/56 (60%), Positives = 47/56 (83%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPS 56
           LFLDK N LIADEV +RGT+DH PVY RE+++R LELS+++II++HNHP+   +P+
Sbjct: 161 LFLDKKNQLIADEVLNRGTVDHAPVYPREVMRRALELSSSNIIILHNHPTCPLSPT 216


>gi|238791279|ref|ZP_04634918.1| DNA repair protein [Yersinia intermedia ATCC 29909]
 gi|238729412|gb|EEQ20927.1| DNA repair protein [Yersinia intermedia ATCC 29909]
          Length = 152

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + ++A E   RGT++ V +Y REIV+  L  +A +IILVHNHPSG P PS AD 
Sbjct: 56  LLLDNQHRILAYEELFRGTLNAVSIYPREIVKLSLRYNAGAIILVHNHPSGEPEPSHADK 115

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  + + L  L++ V DH+I+     VS   +GL
Sbjct: 116 EITNKLKSVLGLLDVQVLDHLIVAGTQVVSLAERGL 151


>gi|188993439|ref|YP_001905449.1| DNA repair protein RadC [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167735199|emb|CAP53411.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris]
          Length = 243

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++++ HNHPSGNP PS+AD 
Sbjct: 146 LFLDSRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSEADR 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ ++  L  ++I + DH +IG    VS 
Sbjct: 206 AVTQRLLQALGLVDIRLLDHFVIGDGRPVSL 236


>gi|220933291|ref|YP_002512190.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7]
 gi|254789667|sp|B8GTE3|Y100_THISH RecName: Full=UPF0758 protein Tgr7_0100
 gi|219994601|gb|ACL71203.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7]
          Length = 223

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 3/96 (3%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E   RGTID   V+ RE+V+R L  +A ++IL HNHPSG   PS +D 
Sbjct: 128 LFLDNRHRVIAFEELFRGTIDGASVHPREVVRRALAHNAAALILAHNHPSGVAEPSRSDE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L  ++I V DH+++G D+ VSF  +GL
Sbjct: 188 AITRRLRDALALVDIRVLDHVVVG-DSLVSFAERGL 222


>gi|331677904|ref|ZP_08378579.1| putative DNA repair protein [Escherichia coli H591]
 gi|195183284|dbj|BAG66823.1| conserved predicted protein [Escherichia coli O111:H-]
 gi|323936899|gb|EGB33182.1| DNA repair protein RadC [Escherichia coli E1520]
 gi|323938740|gb|EGB34987.1| DNA repair protein RadC [Escherichia coli E1520]
 gi|331074364|gb|EGI45684.1| putative DNA repair protein [Escherichia coli H591]
          Length = 163

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 157


>gi|160938816|ref|ZP_02086167.1| hypothetical protein CLOBOL_03710 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437779|gb|EDP15539.1| hypothetical protein CLOBOL_03710 [Clostridium bolteae ATCC
           BAA-613]
          Length = 231

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+    ++ D++ +RGT++   +  RE++   L   A S++LVHNHPSG+P PS ADI
Sbjct: 135 MFLNTKQAMVRDQIMARGTVNASVMTPREVLIEGLRCRAVSMVLVHNHPSGDPTPSRADI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    + + I + DHI+IG   ++SF+
Sbjct: 195 LLTKRLKEAGDLVGITLIDHIVIGDRRYLSFR 226


>gi|253575692|ref|ZP_04853028.1| DNA repair protein RadC [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845030|gb|EES73042.1| DNA repair protein RadC [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 231

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +IA E  S G+++   V+ RE+ +  ++ S+ S++  HNHPSG+P PS  DI
Sbjct: 135 LFLNTKNHIIAQETLSIGSLNASIVHPREVFRAAIKCSSASVVCAHNHPSGDPTPSPEDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT+ +      + I V DHI+IG   FVS K
Sbjct: 195 RMTRRLCEAGEIIGIDVLDHIVIGDGKFVSLK 226


>gi|237704007|ref|ZP_04534488.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|226901919|gb|EEH88178.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
          Length = 163

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 157


>gi|320201859|gb|EFW76434.1| putative radC-like protein [Escherichia coli EC4100B]
          Length = 124

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 28  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 87

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 88  LITERLVQALGLVDIRVPDHLIVGGNQVFSF 118


>gi|26249506|ref|NP_755546.1| putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|301017434|ref|ZP_07182164.1| putative DNA repair protein RadC [Escherichia coli MS 69-1]
 gi|26109914|gb|AAN82119.1|AE016766_207 Putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|291291731|gb|ADD91702.1| YeeS [Escherichia coli]
 gi|300400214|gb|EFJ83752.1| putative DNA repair protein RadC [Escherichia coli MS 69-1]
 gi|323960166|gb|EGB55809.1| DNA repair protein RadC [Escherichia coli H489]
 gi|332102586|gb|EGJ05932.1| YeeS protein [Shigella sp. D9]
          Length = 163

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 157


>gi|284922002|emb|CBG35080.1| putative DNA repair protein [Escherichia coli 042]
          Length = 163

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+IIG     SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIIGGSQVFSF 157


>gi|15832057|ref|NP_310830.1| DNA repair protein [Escherichia coli O157:H7 str. Sakai]
 gi|168751564|ref|ZP_02776586.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4113]
 gi|168758439|ref|ZP_02783446.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4401]
 gi|168764086|ref|ZP_02789093.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4501]
 gi|168770321|ref|ZP_02795328.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4486]
 gi|168777112|ref|ZP_02802119.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4196]
 gi|168783999|ref|ZP_02809006.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4076]
 gi|168790206|ref|ZP_02815213.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC869]
 gi|168801968|ref|ZP_02826975.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC508]
 gi|193062959|ref|ZP_03044051.1| DNA repair protein, RadC family [Escherichia coli E22]
 gi|195939516|ref|ZP_03084898.1| putative DNA repair protein [Escherichia coli O157:H7 str. EC4024]
 gi|208810673|ref|ZP_03252549.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4206]
 gi|208816945|ref|ZP_03258065.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4045]
 gi|208819226|ref|ZP_03259546.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4042]
 gi|209397679|ref|YP_002271174.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4115]
 gi|217329638|ref|ZP_03445717.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           TW14588]
 gi|254793710|ref|YP_003078547.1| DNA repair protein [Escherichia coli O157:H7 str. TW14359]
 gi|291283239|ref|YP_003500057.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str.
           CB9615]
 gi|291284324|ref|YP_003501142.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str.
           CB9615]
 gi|13362271|dbj|BAB36226.1| putative DNA repair protein [Escherichia coli O157:H7 str. Sakai]
 gi|187767605|gb|EDU31449.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4196]
 gi|188014397|gb|EDU52519.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4113]
 gi|188998741|gb|EDU67727.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4076]
 gi|189354753|gb|EDU73172.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4401]
 gi|189360779|gb|EDU79198.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4486]
 gi|189365845|gb|EDU84261.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4501]
 gi|189370302|gb|EDU88718.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC869]
 gi|189375952|gb|EDU94368.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC508]
 gi|192931218|gb|EDV83820.1| DNA repair protein, RadC family [Escherichia coli E22]
 gi|208725189|gb|EDZ74896.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4206]
 gi|208731288|gb|EDZ79977.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4045]
 gi|208739349|gb|EDZ87031.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4042]
 gi|209159079|gb|ACI36512.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4115]
 gi|217317406|gb|EEC25835.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           TW14588]
 gi|254593110|gb|ACT72471.1| DNA repair protein [Escherichia coli O157:H7 str. TW14359]
 gi|290763112|gb|ADD57073.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str.
           CB9615]
 gi|290764197|gb|ADD58158.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str.
           CB9615]
 gi|320188176|gb|EFW62840.1| putative DNA repair protein [Escherichia coli O157:H7 str. EC1212]
 gi|326338356|gb|EGD62184.1| putative DNA repair protein [Escherichia coli O157:H7 str. 1044]
 gi|326347123|gb|EGD70856.1| putative DNA repair protein [Escherichia coli O157:H7 str. 1125]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|296328881|ref|ZP_06871392.1| DNA repair protein RadC [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154002|gb|EFG94809.1| DNA repair protein RadC [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 232

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI ++ + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I   L     ++ +HIII K+++ SF
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSF 226


>gi|59801108|ref|YP_207820.1| DNA repair protein RadC [Neisseria gonorrhoeae FA 1090]
 gi|194098788|ref|YP_002001850.1| DNA repair protein RadC [Neisseria gonorrhoeae NCCP11945]
 gi|239999080|ref|ZP_04719004.1| DNA repair protein RadC [Neisseria gonorrhoeae 35/02]
 gi|240014013|ref|ZP_04720926.1| DNA repair protein RadC [Neisseria gonorrhoeae DGI18]
 gi|240016454|ref|ZP_04722994.1| DNA repair protein RadC [Neisseria gonorrhoeae FA6140]
 gi|240080573|ref|ZP_04725116.1| DNA repair protein RadC [Neisseria gonorrhoeae FA19]
 gi|240113058|ref|ZP_04727548.1| DNA repair protein RadC [Neisseria gonorrhoeae MS11]
 gi|240115813|ref|ZP_04729875.1| DNA repair protein RadC [Neisseria gonorrhoeae PID18]
 gi|240118111|ref|ZP_04732173.1| DNA repair protein RadC [Neisseria gonorrhoeae PID1]
 gi|240121579|ref|ZP_04734541.1| DNA repair protein RadC [Neisseria gonorrhoeae PID24-1]
 gi|240123661|ref|ZP_04736617.1| DNA repair protein RadC [Neisseria gonorrhoeae PID332]
 gi|240125851|ref|ZP_04738737.1| DNA repair protein RadC [Neisseria gonorrhoeae SK-92-679]
 gi|240128360|ref|ZP_04741021.1| DNA repair protein RadC [Neisseria gonorrhoeae SK-93-1035]
 gi|254493858|ref|ZP_05107029.1| DNA repair protein [Neisseria gonorrhoeae 1291]
 gi|260440370|ref|ZP_05794186.1| DNA repair protein RadC [Neisseria gonorrhoeae DGI2]
 gi|268594918|ref|ZP_06129085.1| DNA repair protein RadC [Neisseria gonorrhoeae 35/02]
 gi|268596703|ref|ZP_06130870.1| DNA repair protein RadC [Neisseria gonorrhoeae FA19]
 gi|268599142|ref|ZP_06133309.1| DNA repair protein RadC [Neisseria gonorrhoeae MS11]
 gi|268601488|ref|ZP_06135655.1| DNA repair protein RadC [Neisseria gonorrhoeae PID18]
 gi|268603826|ref|ZP_06137993.1| DNA repair protein RadC [Neisseria gonorrhoeae PID1]
 gi|268682290|ref|ZP_06149152.1| DNA repair protein RadC [Neisseria gonorrhoeae PID332]
 gi|268684448|ref|ZP_06151310.1| DNA repair protein [Neisseria gonorrhoeae SK-92-679]
 gi|268686758|ref|ZP_06153620.1| DNA repair protein RadC [Neisseria gonorrhoeae SK-93-1035]
 gi|291043667|ref|ZP_06569383.1| DNA repair protein RadC [Neisseria gonorrhoeae DGI2]
 gi|293398970|ref|ZP_06643135.1| DNA repair protein radC [Neisseria gonorrhoeae F62]
 gi|73913737|sp|Q5F8S9|Y681_NEIG1 RecName: Full=UPF0758 protein NGO0681
 gi|238690211|sp|B4RM65|Y1225_NEIG2 RecName: Full=UPF0758 protein NGK_1225
 gi|59718003|gb|AAW89408.1| putative DNA repair protein [Neisseria gonorrhoeae FA 1090]
 gi|193934078|gb|ACF29902.1| putative DNA repair protein [Neisseria gonorrhoeae NCCP11945]
 gi|226512898|gb|EEH62243.1| DNA repair protein [Neisseria gonorrhoeae 1291]
 gi|268548307|gb|EEZ43725.1| DNA repair protein RadC [Neisseria gonorrhoeae 35/02]
 gi|268550491|gb|EEZ45510.1| DNA repair protein RadC [Neisseria gonorrhoeae FA19]
 gi|268583273|gb|EEZ47949.1| DNA repair protein RadC [Neisseria gonorrhoeae MS11]
 gi|268585619|gb|EEZ50295.1| DNA repair protein RadC [Neisseria gonorrhoeae PID18]
 gi|268587957|gb|EEZ52633.1| DNA repair protein RadC [Neisseria gonorrhoeae PID1]
 gi|268622574|gb|EEZ54974.1| DNA repair protein RadC [Neisseria gonorrhoeae PID332]
 gi|268624732|gb|EEZ57132.1| DNA repair protein [Neisseria gonorrhoeae SK-92-679]
 gi|268627042|gb|EEZ59442.1| DNA repair protein RadC [Neisseria gonorrhoeae SK-93-1035]
 gi|291012130|gb|EFE04119.1| DNA repair protein RadC [Neisseria gonorrhoeae DGI2]
 gi|291610384|gb|EFF39494.1| DNA repair protein radC [Neisseria gonorrhoeae F62]
 gi|317164372|gb|ADV07913.1| DNA repair protein RadC [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 225

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+      SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQTVRSFRQLGLM 224


>gi|88705460|ref|ZP_01103171.1| DNA repair protein RadC [Congregibacter litoralis KT71]
 gi|88700550|gb|EAQ97658.1| DNA repair protein RadC [Congregibacter litoralis KT71]
          Length = 224

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           LFLD +H++L  ++V S GT+D   VY RE+V R L   A +++L HNHPSG  +PS AD
Sbjct: 128 LFLDSQHHLLCCEDVFS-GTLDGAAVYPREVVLRALHHRAAAVVLAHNHPSGLTHPSSAD 186

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            ++TQ +   L  ++I V DH IIG+    SF
Sbjct: 187 RHITQRLRDALALVDIRVLDHFIIGRGRSYSF 218


>gi|300816625|ref|ZP_07096846.1| putative DNA repair protein RadC [Escherichia coli MS 107-1]
 gi|300530855|gb|EFK51917.1| putative DNA repair protein RadC [Escherichia coli MS 107-1]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|188495664|ref|ZP_03002934.1| DNA repair protein, RadC family [Escherichia coli 53638]
 gi|193062199|ref|ZP_03043295.1| DNA repair protein, RadC family [Escherichia coli E22]
 gi|193062945|ref|ZP_03044038.1| DNA repair protein, RadC family [Escherichia coli E22]
 gi|256023420|ref|ZP_05437285.1| DNA repair protein [Escherichia sp. 4_1_40B]
 gi|260844612|ref|YP_003222390.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
 gi|260856468|ref|YP_003230359.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368]
 gi|260868651|ref|YP_003235053.1| putative DNA repair protein [Escherichia coli O111:H- str. 11128]
 gi|300824768|ref|ZP_07104873.1| putative DNA repair protein RadC [Escherichia coli MS 119-7]
 gi|312973758|ref|ZP_07787930.1| DNA repair RadC family protein [Escherichia coli 1827-70]
 gi|188490863|gb|EDU65966.1| DNA repair protein, RadC family [Escherichia coli 53638]
 gi|192931588|gb|EDV84189.1| DNA repair protein, RadC family [Escherichia coli E22]
 gi|192932419|gb|EDV85017.1| DNA repair protein, RadC family [Escherichia coli E22]
 gi|226237408|dbj|BAH46930.1| predicted DNA repair protein [Escherichia coli O55:H7]
 gi|257755117|dbj|BAI26619.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368]
 gi|257759759|dbj|BAI31256.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
 gi|257765007|dbj|BAI36502.1| putative DNA repair protein [Escherichia coli O111:H- str. 11128]
 gi|300522755|gb|EFK43824.1| putative DNA repair protein RadC [Escherichia coli MS 119-7]
 gi|310332353|gb|EFP99588.1| DNA repair RadC family protein [Escherichia coli 1827-70]
 gi|323156365|gb|EFZ42522.1| DNA repair RadC family protein [Escherichia coli EPECa14]
 gi|323177162|gb|EFZ62752.1| DNA repair protein RadC family protein [Escherichia coli 1180]
 gi|330911842|gb|EGH40352.1| putative DNA repair protein [Escherichia coli AA86]
 gi|332092379|gb|EGI97452.1| DNA repair protein RadC family protein [Shigella boydii 5216-82]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|57434429|emb|CAI43846.1| YeeS protein [Escherichia coli]
          Length = 163

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 157


>gi|256845195|ref|ZP_05550653.1| DNA repair protein radC [Fusobacterium sp. 3_1_36A2]
 gi|294785500|ref|ZP_06750788.1| DNA repair protein RadC [Fusobacterium sp. 3_1_27]
 gi|256718754|gb|EEU32309.1| DNA repair protein radC [Fusobacterium sp. 3_1_36A2]
 gi|294487214|gb|EFG34576.1| DNA repair protein RadC [Fusobacterium sp. 3_1_27]
          Length = 232

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI ++ + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I   L     ++ +HIII K+++ SF
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSF 226


>gi|26246178|ref|NP_752217.1| putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|18265872|gb|AAL67345.1|AF447814_13 intergenic-region protein [Escherichia coli]
 gi|26106575|gb|AAN78761.1|AE016755_261 Putative radC-like protein yeeS [Escherichia coli CFT073]
          Length = 163

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 157


>gi|161870118|ref|YP_001599288.1| DNA repair protein RadC [Neisseria meningitidis 053442]
 gi|218768270|ref|YP_002342782.1| DNA repair protein RadC [Neisseria meningitidis Z2491]
 gi|13431809|sp|Q9JU84|Y1448_NEIMA RecName: Full=UPF0758 protein NMA1448
 gi|189029398|sp|A9LZF5|Y1157_NEIM0 RecName: Full=UPF0758 protein NMCC_1157
 gi|121052278|emb|CAM08606.1| putative DNA repair protein [Neisseria meningitidis Z2491]
 gi|161595671|gb|ABX73331.1| DNA repair protein [Neisseria meningitidis 053442]
 gi|254671390|emb|CBA08859.1| DNA repair protein RadC [Neisseria meningitidis alpha153]
 gi|254673513|emb|CBA08942.1| DNA repair protein RadC [Neisseria meningitidis alpha275]
 gi|261392467|emb|CAX50016.1| putative DNA repair protein RadC [Neisseria meningitidis 8013]
 gi|316984664|gb|EFV63628.1| DNA repair RadC family protein [Neisseria meningitidis H44/76]
 gi|325134196|gb|EGC56845.1| DNA repair protein RadC [Neisseria meningitidis M13399]
 gi|325140244|gb|EGC62769.1| DNA repair protein RadC [Neisseria meningitidis CU385]
 gi|325144387|gb|EGC66689.1| DNA repair protein RadC [Neisseria meningitidis M01-240013]
 gi|325200279|gb|ADY95734.1| DNA repair protein RadC [Neisseria meningitidis H44/76]
 gi|325206135|gb|ADZ01588.1| DNA repair protein RadC [Neisseria meningitidis M04-240196]
          Length = 225

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+      SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTAQTVRSFRQLGLM 224


>gi|77405495|ref|ZP_00782587.1| DNA repair protein RadC [Streptococcus agalactiae H36B]
 gi|77175892|gb|EAO78669.1| DNA repair protein RadC [Streptococcus agalactiae H36B]
          Length = 141

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +++D  N +I       GT+       REI+    +  ATS+I++HNHPSG+PNPS++D+
Sbjct: 44  IYMDTQNRIIEQRTIFIGTVRRSVAEPREILHYACKNMATSLIIIHNHPSGSPNPSESDL 103

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + T+ I  + + L I+  DHII+GK+ + SF+
Sbjct: 104 SFTKKIKRSCDHLGIVCLDHIIVGKNKYYSFR 135


>gi|317494719|ref|ZP_07953131.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917321|gb|EFV38668.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 228

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTI+ V VY REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 132 LFLDNQHRVIRSEEMFSGTINCVDVYPREIVRGALKVNAVALILAHNHPSGIAEPSAADR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++     L+I V DH++IG    VSF
Sbjct: 192 VLTERVVKACALLDIRVLDHMVIGHGQSVSF 222


>gi|260866447|ref|YP_003232849.1| putative DNA repair protein [Escherichia coli O111:H- str. 11128]
 gi|257762803|dbj|BAI34298.1| putative DNA repair protein [Escherichia coli O111:H- str. 11128]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|16129943|ref|NP_416506.1| CP4-44 prophage; predicted DNA repair protein [Escherichia coli
           str. K-12 substr. MG1655]
 gi|89108821|ref|AP_002601.1| predicted DNA repair protein [Escherichia coli str. K-12 substr.
           W3110]
 gi|170081631|ref|YP_001730951.1| CP4-44 prophage; DNA repair protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|218558883|ref|YP_002391796.1| DNA repair protein; CP4-44 prophage [Escherichia coli S88]
 gi|218690065|ref|YP_002398277.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|218695627|ref|YP_002403294.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
 gi|238901193|ref|YP_002926989.1| CP4-44 prophage; putative DNA repair protein [Escherichia coli
           BW2952]
 gi|3025155|sp|P76362|YEES_ECOLI RecName: Full=UPF0758 protein yeeS
 gi|1736671|dbj|BAA15826.1| predicted DNA repair protein [Escherichia coli str. K12 substr.
           W3110]
 gi|1788312|gb|AAC75063.1| CP4-44 prophage; predicted DNA repair protein [Escherichia coli
           str. K-12 substr. MG1655]
 gi|169889466|gb|ACB03173.1| CP4-44 prophage; predicted DNA repair protein [Escherichia coli
           str. K-12 substr. DH10B]
 gi|218352359|emb|CAU98132.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
 gi|218365652|emb|CAR03388.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli S88]
 gi|218427629|emb|CAR08539.2| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|238860616|gb|ACR62614.1| CP4-44 prophage; predicted DNA repair protein [Escherichia coli
           BW2952]
 gi|260448897|gb|ACX39319.1| DNA repair protein RadC [Escherichia coli DH1]
 gi|315136634|dbj|BAJ43793.1| DNA repair protein, RadC family [Escherichia coli DH1]
          Length = 148

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 142


>gi|331647648|ref|ZP_08348740.1| putative DNA repair protein [Escherichia coli M605]
 gi|331043372|gb|EGI15510.1| putative DNA repair protein [Escherichia coli M605]
          Length = 163

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQAFSF 157


>gi|110643998|ref|YP_671728.1| putative radC-like protein [Escherichia coli 536]
 gi|170682543|ref|YP_001744295.1| RadC family DNA repair protein [Escherichia coli SMS-3-5]
 gi|256019130|ref|ZP_05432995.1| putative radC-like protein [Shigella sp. D9]
 gi|306816730|ref|ZP_07450859.1| putative radC-like protein [Escherichia coli NC101]
 gi|309797259|ref|ZP_07691654.1| putative DNA repair protein RadC [Escherichia coli MS 145-7]
 gi|24528057|emb|CAD33787.1| Z1217 protein [Escherichia coli]
 gi|110345590|gb|ABG71827.1| putative radC-like protein [Escherichia coli 536]
 gi|170520261|gb|ACB18439.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5]
 gi|305849947|gb|EFM50407.1| putative radC-like protein [Escherichia coli NC101]
 gi|307555022|gb|ADN47797.1| DNA repair protein [Escherichia coli ABU 83972]
 gi|308119134|gb|EFO56396.1| putative DNA repair protein RadC [Escherichia coli MS 145-7]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|19704244|ref|NP_603806.1| DNA repair protein radC [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|25009025|sp|Q8RF15|Y909_FUSNN RecName: Full=UPF0758 protein FN0909
 gi|19714474|gb|AAL95105.1| DNA repair protein radC [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 232

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI ++ + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I   L     ++ +HIII K+++ SF
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSF 226


>gi|309703383|emb|CBJ02722.1| putative RadC DNA repair protein [Escherichia coli ETEC H10407]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|281178374|dbj|BAI54704.1| putative phage DNA repair protein [Escherichia coli SE15]
          Length = 156

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+  E+  RGT++ V V+ RE+++R L+ +A ++ILVHNHPSG P PS  DI
Sbjct: 60  ILLDNQNQLLHREILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDI 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L  L++ + DH I+     VS   +GL
Sbjct: 120 QLTKKLQELLEILDVRLLDHFIVAGTETVSMAERGL 155


>gi|187733812|ref|YP_001879774.1| DNA repair protein, RadC family [Shigella boydii CDC 3083-94]
 gi|187430804|gb|ACD10078.1| DNA repair protein, RadC family [Shigella boydii CDC 3083-94]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|91772435|ref|YP_565127.1| DNA repair protein RadC [Methanococcoides burtonii DSM 6242]
 gi|121684487|sp|Q12YU9|Y382_METBU RecName: Full=UPF0758 protein Mbur_0382
 gi|91711450|gb|ABE51377.1| DNA repair protein RadC [Methanococcoides burtonii DSM 6242]
          Length = 229

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +I +EV S G+++   V+ RE+ +  L  S+ S+IL HNHPSG+P PS  DI
Sbjct: 132 LYLDTKNNIIKEEVISIGSLNANIVHPREVFKSALMESSASVILTHNHPSGDPAPSREDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++     L I V DH+IIG   +VS K
Sbjct: 192 AVTEKLVEGGKILGISVLDHVIIGDGRYVSLK 223


>gi|25011219|ref|NP_735614.1| DNA repair protein RadC [Streptococcus agalactiae NEM316]
 gi|76797900|ref|ZP_00780162.1| DNA repair protein radC-like protein [Streptococcus agalactiae
           18RS21]
 gi|77408712|ref|ZP_00785444.1| DNA repair protein RadC [Streptococcus agalactiae COH1]
 gi|77410546|ref|ZP_00786907.1| DNA repair protein RadC [Streptococcus agalactiae CJB111]
 gi|39931967|sp|Q8E564|Y1168_STRA3 RecName: Full=UPF0758 protein gbs1168
 gi|23095643|emb|CAD46827.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76586737|gb|EAO63233.1| DNA repair protein radC-like protein [Streptococcus agalactiae
           18RS21]
 gi|77163494|gb|EAO74444.1| DNA repair protein RadC [Streptococcus agalactiae CJB111]
 gi|77172687|gb|EAO75824.1| DNA repair protein RadC [Streptococcus agalactiae COH1]
          Length = 226

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +++D  N +I       GT+       REI+    +  ATS+I++HNHPSG+PNPS++D+
Sbjct: 129 IYMDTQNRIIEQRTIFIGTVRRSVAEPREILHYACKNMATSLIIIHNHPSGSPNPSESDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + T+ I  + + L I+  DHII+GK+ + SF+
Sbjct: 189 SFTKKIKRSCDHLGIVCLDHIIVGKNKYYSFR 220


>gi|218692437|ref|YP_002400649.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|218702808|ref|YP_002410437.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           IAI39]
 gi|254162884|ref|YP_003045992.1| putative DNA repair protein [Escherichia coli B str. REL606]
 gi|218372794|emb|CAR20673.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           IAI39]
 gi|218430001|emb|CAR10981.2| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|253974785|gb|ACT40456.1| predicted DNA repair protein [Escherichia coli B str. REL606]
          Length = 148

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 142


>gi|15808746|gb|AAL08475.1| unknown [Shigella flexneri 2a]
 gi|281600433|gb|ADA73417.1| putative DNA repair protein [Shigella flexneri 2002017]
          Length = 163

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 157


>gi|15800738|ref|NP_286752.1| RadC family DNA repair protein [Escherichia coli O157:H7 EDL933]
 gi|15830657|ref|NP_309430.1| DNA repair protein [Escherichia coli O157:H7 str. Sakai]
 gi|168747209|ref|ZP_02772231.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4113]
 gi|168754500|ref|ZP_02779507.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4401]
 gi|168760639|ref|ZP_02785646.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4501]
 gi|168767678|ref|ZP_02792685.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4486]
 gi|168773864|ref|ZP_02798871.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4196]
 gi|168781194|ref|ZP_02806201.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4076]
 gi|168789211|ref|ZP_02814218.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC869]
 gi|168789954|ref|ZP_02814961.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC869]
 gi|168799298|ref|ZP_02824305.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC508]
 gi|195935412|ref|ZP_03080794.1| putative DNA repair protein [Escherichia coli O157:H7 str. EC4024]
 gi|208806612|ref|ZP_03248949.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4206]
 gi|208815111|ref|ZP_03256290.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4045]
 gi|208822765|ref|ZP_03263084.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4042]
 gi|209398241|ref|YP_002269871.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4115]
 gi|215486235|ref|YP_002328666.1| hypothetical protein E2348C_1116 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217328314|ref|ZP_03444396.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           TW14588]
 gi|254792408|ref|YP_003077245.1| putative DNA repair protein, RADC family [Escherichia coli O157:H7
           str. TW14359]
 gi|260854510|ref|YP_003228401.1| hypothetical protein ECO26_1359 [Escherichia coli O26:H11 str.
           11368]
 gi|260867389|ref|YP_003233791.1| hypothetical protein ECO111_1303 [Escherichia coli O111:H- str.
           11128]
 gi|12514034|gb|AAG55362.1|AE005277_3 putative DNA repair protein, RADC family [Escherichia coli O157:H7
           str. EDL933]
 gi|13360863|dbj|BAB34826.1| putative DNA repair protein [Escherichia coli O157:H7 str. Sakai]
 gi|187770349|gb|EDU34193.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4196]
 gi|188018129|gb|EDU56251.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4113]
 gi|189001340|gb|EDU70326.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358273|gb|EDU76692.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4401]
 gi|189363292|gb|EDU81711.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4486]
 gi|189368665|gb|EDU87081.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4501]
 gi|189370470|gb|EDU88886.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC869]
 gi|189371180|gb|EDU89596.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC869]
 gi|189378248|gb|EDU96664.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC508]
 gi|208726413|gb|EDZ76014.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4206]
 gi|208731759|gb|EDZ80447.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4045]
 gi|208738250|gb|EDZ85933.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4042]
 gi|209159641|gb|ACI37074.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4115]
 gi|215264307|emb|CAS08664.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|217318741|gb|EEC27167.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           TW14588]
 gi|254591808|gb|ACT71169.1| putative DNA repair protein, RADC family [Escherichia coli O157:H7
           str. TW14359]
 gi|257753159|dbj|BAI24661.1| hypothetical protein ECO26_1359 [Escherichia coli O26:H11 str.
           11368]
 gi|257763745|dbj|BAI35240.1| hypothetical protein ECO111_1303 [Escherichia coli O111:H- str.
           11128]
 gi|320189702|gb|EFW64358.1| Putative radC-like protein yeeS [Escherichia coli O157:H7 str.
           EC1212]
 gi|323156828|gb|EFZ42962.1| DNA repair RadC family protein [Escherichia coli EPECa14]
 gi|326339244|gb|EGD63058.1| Putative radC-like protein yeeS [Escherichia coli O157:H7 str.
           1125]
 gi|326344796|gb|EGD68544.1| Putative radC-like protein yeeS [Escherichia coli O157:H7 str.
           1044]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|330827407|ref|YP_004390645.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
 gi|329312715|gb|AEB87129.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
          Length = 164

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I      RGT+    VY RE+V+  L L+A ++I  HNHPSG P PS AD 
Sbjct: 68  IFLDAQNRVIEYIELFRGTLTQTSVYPREVVKTSLRLNAAAVIFAHNHPSGVPEPSRADE 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           N+T+ +   L  +++ V DH+++   A VSF  +GL
Sbjct: 128 NLTKVLKDALALVDVRVLDHVVVAGGASVSFAQRGL 163


>gi|323175748|gb|EFZ61342.1| DNA repair protein RadC family protein [Escherichia coli 1180]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|158520692|ref|YP_001528562.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3]
 gi|158509518|gb|ABW66485.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3]
          Length = 253

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  N +I  E  S G++   PVY RE+V R L   A ++I  HNHPSG P PS  DI
Sbjct: 132 IFMDAKNRVIVVETLSEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPEPSRQDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++     + I VH+HII+G+    SF
Sbjct: 192 AITRKLVMACKTMGITVHEHIIVGERGHFSF 222


>gi|227499946|ref|ZP_03930039.1| DNA repair protein RadC [Anaerococcus tetradius ATCC 35098]
 gi|227218055|gb|EEI83328.1| DNA repair protein RadC [Anaerococcus tetradius ATCC 35098]
          Length = 228

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 60/92 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N++IA +  S G +    V  RE+ ++ ++ SA S+I+VHNHPSGNPNPS  D 
Sbjct: 132 ILLDTKNVIIAKDFVSMGDLSSTIVNPREVFKKAIKKSAKSMIIVHNHPSGNPNPSREDF 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +  +   L+I V DHIIIGKD F SFK
Sbjct: 192 AITKRLADSGELLDIEVLDHIIIGKDCFYSFK 223


>gi|218706553|ref|YP_002414072.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           UMN026]
 gi|218433650|emb|CAR14565.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           UMN026]
          Length = 148

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 142


>gi|26250960|ref|NP_757000.1| putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|117625240|ref|YP_854323.1| putative radC-like protein YeeS [Escherichia coli APEC O1]
 gi|26111392|gb|AAN83574.1|AE016771_85 Putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|70608386|gb|AAZ04458.1| putative RadC-like protein [Escherichia coli]
 gi|115514364|gb|ABJ02439.1| putative radC-like protein YeeS [Escherichia coli APEC O1]
 gi|323957540|gb|EGB53256.1| DNA repair protein RadC [Escherichia coli H263]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|298382287|ref|ZP_06991884.1| radC-like protein yeeS [Escherichia coli FVEC1302]
 gi|298277427|gb|EFI18943.1| radC-like protein yeeS [Escherichia coli FVEC1302]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|258508259|ref|YP_003171010.1| DNA repair protein radC [Lactobacillus rhamnosus GG]
 gi|258539471|ref|YP_003173970.1| DNA repair protein radC [Lactobacillus rhamnosus Lc 705]
 gi|257148186|emb|CAR87159.1| DNA repair protein radC [Lactobacillus rhamnosus GG]
 gi|257151147|emb|CAR90119.1| DNA repair protein radC [Lactobacillus rhamnosus Lc 705]
 gi|259649577|dbj|BAI41739.1| DNA repair protein [Lactobacillus rhamnosus GG]
          Length = 222

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I +++ + GT+D      R + +  L+LSAT++I+VHNHPSG+P+PS AD 
Sbjct: 124 LFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           + T         L + + DH+IIG+ ++ SF
Sbjct: 184 DTTTRFQLAAALLGMHLLDHLIIGRQSYYSF 214


>gi|301168693|emb|CBW28284.1| putative DNA repair radC-like protein [Haemophilus influenzae
           10810]
          Length = 156

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ + LI  EV  +G++  + V IREI+++ L+L+A++II+ HNHP+GN  PSDAD 
Sbjct: 60  LFLDRIHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      ++I + DH I+   A   F
Sbjct: 120 YITKRLKEACELMDIKLLDHFIVSGSASFCF 150


>gi|57434486|emb|CAI43901.1| YeeS protein [Escherichia coli]
          Length = 163

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 157


>gi|56476778|ref|YP_158367.1| RadC family DNA repair protein [Aromatoleum aromaticum EbN1]
 gi|56312821|emb|CAI07466.1| DNA repair protein similar to radC-family [Aromatoleum aromaticum
           EbN1]
          Length = 164

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   +G++D   VY R +VQR L L+A+++IL H HPSG   PS AD 
Sbjct: 68  VFLDSQHQVLAYEPLFKGSVDQTSVYPRVVVQRALALNASALILAHQHPSGVTEPSAADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  +++ V DH I+GK A  SF
Sbjct: 128 ALTDRLKDALAMVDVRVVDHFIVGKGAPYSF 158


>gi|281181419|dbj|BAI57749.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|229552057|ref|ZP_04440782.1| DNA repair protein RadC [Lactobacillus rhamnosus LMS2-1]
 gi|229314574|gb|EEN80547.1| DNA repair protein RadC [Lactobacillus rhamnosus LMS2-1]
          Length = 236

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I +++ + GT+D      R + +  L+LSAT++I+VHNHPSG+P+PS AD 
Sbjct: 138 LFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADR 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           + T         L + + DH+IIG+ ++ SF
Sbjct: 198 DTTTRFQLAAALLGMHLLDHLIIGRQSYYSF 228


>gi|218707946|ref|YP_002415465.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           UMN026]
 gi|331650756|ref|ZP_08351784.1| putative DNA repair protein [Escherichia coli M718]
 gi|218435043|emb|CAR15996.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           UMN026]
 gi|323950625|gb|EGB46503.1| DNA repair protein RadC [Escherichia coli H252]
 gi|331051210|gb|EGI23259.1| putative DNA repair protein [Escherichia coli M718]
          Length = 163

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 157


>gi|74318606|ref|YP_316346.1| DNA repair protein RadC [Thiobacillus denitrificans ATCC 25259]
 gi|123611212|sp|Q3SFR5|Y2588_THIDA RecName: Full=UPF0758 protein Tbd_2588
 gi|74058101|gb|AAZ98541.1| DNA repair protein RadC [Thiobacillus denitrificans ATCC 25259]
          Length = 224

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +IA E   RGT+    VY REIV+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 VFLNAQNRVIAVEELFRGTLTQTSVYPREIVKRALAHNAAAMILAHNHPSGVNEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ +   L  ++I V DH II   + +SF
Sbjct: 188 SLTRRLAEALALVDIRVLDHFIIAGASALSF 218


>gi|256024477|ref|ZP_05438342.1| putative radC-like protein YeeS [Escherichia sp. 4_1_40B]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|194432463|ref|ZP_03064750.1| DNA repair protein, RadC family [Shigella dysenteriae 1012]
 gi|194419350|gb|EDX35432.1| DNA repair protein, RadC family [Shigella dysenteriae 1012]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|323945928|gb|EGB41970.1| DNA repair protein RadC [Escherichia coli H120]
          Length = 163

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 157


>gi|323951546|gb|EGB47421.1| DNA repair protein RadC [Escherichia coli H252]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|331679016|ref|ZP_08379688.1| putative DNA repair protein [Escherichia coli H591]
 gi|331073081|gb|EGI44404.1| putative DNA repair protein [Escherichia coli H591]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|218692535|ref|YP_002400747.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|283788471|ref|YP_003368336.1| putative DNA repair protein [Citrobacter rodentium ICC168]
 gi|218430099|emb|CAR11092.2| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|282951925|emb|CBG91646.1| putative DNA repair protein [Citrobacter rodentium ICC168]
          Length = 163

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 157


>gi|20807378|ref|NP_622549.1| DNA repair proteins [Thermoanaerobacter tengcongensis MB4]
 gi|25009024|sp|Q8RBC5|Y897_THETN RecName: Full=UPF0758 protein TTE0897
 gi|20515897|gb|AAM24153.1| DNA repair proteins [Thermoanaerobacter tengcongensis MB4]
          Length = 233

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E SA+SIILVHNHPSG+P PS  D+
Sbjct: 134 VMLNVKNKIIAIETISIGSLNTSIVHPREVFKAAIERSASSIILVHNHPSGDPTPSREDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++   N L I V DH+IIG    +S K
Sbjct: 194 EVTKRLVEAGNILGIKVLDHVIIGDGRGISLK 225


>gi|157157651|ref|YP_001465824.1| RadC family DNA repair protein [Escherichia coli E24377A]
 gi|298378469|ref|ZP_06988353.1| radC-like protein yeeS [Escherichia coli FVEC1302]
 gi|157079681|gb|ABV19389.1| DNA repair protein, RadC family [Escherichia coli E24377A]
 gi|298280803|gb|EFI22304.1| radC-like protein yeeS [Escherichia coli FVEC1302]
          Length = 158

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|239817003|ref|YP_002945913.1| DNA repair protein RadC [Variovorax paradoxus S110]
 gi|259551914|sp|C5CWP0|Y4033_VARPS RecName: Full=UPF0758 protein Vapar_4033
 gi|239803580|gb|ACS20647.1| DNA repair protein RadC [Variovorax paradoxus S110]
          Length = 225

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E   RGT+    VY RE+V R L   A +++L HNHPSG+  PS AD 
Sbjct: 129 LFLDAQHRLIVLEELFRGTLTQTSVYPREVVTRALHHQAAAVVLSHNHPSGSIEPSRADE 188

Query: 61  NMTQNIITTLNPLNIIVHDHIII--GKDAFVSFKGL 94
           ++TQ +   L+ +++ V DH+I+  G+   ++ KGL
Sbjct: 189 SLTQTLRAALSLIDVRVLDHVIVSAGQSYSMAEKGL 224


>gi|218560008|ref|YP_002392921.1| DNA repair protein; CP4-44 prophage [Escherichia coli S88]
 gi|218366777|emb|CAR04544.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli S88]
          Length = 148

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 142


>gi|315618026|gb|EFU98618.1| DNA repair radC domain protein [Escherichia coli 3431]
          Length = 108

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 12  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 71

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 72  LITERLVQALGLVDIRVPDHLIVGGNQVFSF 102


>gi|301155839|emb|CBW15307.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 156

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ + LI  EV  +G++  + V IREI+++ L+L+A++II+ HNHP+GN  PSDAD 
Sbjct: 60  LFLDRIHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      + I + DH I+   A   F
Sbjct: 120 YITKRLKEACELMEIKLLDHFIVSGSASFCF 150


>gi|218561456|ref|YP_002394369.1| DNA repair protein; CP4-44 prophage [Escherichia coli S88]
 gi|218368225|emb|CAR06041.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli S88]
          Length = 148

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 142


>gi|42520150|ref|NP_966065.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of
          Drosophila melanogaster]
 gi|42409887|gb|AAS13999.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of
          Drosophila melanogaster]
          Length = 99

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          ++ D+   L  +EV + GT+D VP YIRE+ ++ L   ATSII+ HNHP G   PSD D 
Sbjct: 4  IYFDQKCRLKGEEVFT-GTVDKVPFYIREVTRKALIRKATSIIISHNHPEGRLKPSDEDE 62

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +T+++      + I + DHIII    + SFK
Sbjct: 63 AVTKDLAKACQTIGIRLLDHIIITSVGYFSFK 94


>gi|239623991|ref|ZP_04667022.1| DNA repair protein RadC [Clostridiales bacterium 1_7_47_FAA]
 gi|239522022|gb|EEQ61888.1| DNA repair protein RadC [Clostridiales bacterium 1_7_47FAA]
          Length = 231

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+    LI D + SRGT++   +  REI+   L   A S++LVHNHPSG+P+PS AD+
Sbjct: 135 MFLNTKQGLIKDLLISRGTVNASVMTPREILIEALRCCAVSMVLVHNHPSGDPSPSRADL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I + DHIIIG   ++SF+  +I+
Sbjct: 195 MLTERVKEAGVLIGITLIDHIIIGDRRYLSFREQKIL 231


>gi|306814130|ref|ZP_07448300.1| putative DNA repair protein [Escherichia coli NC101]
 gi|331656222|ref|ZP_08357184.1| intergenic-region protein [Escherichia coli TA206]
 gi|305852517|gb|EFM52966.1| putative DNA repair protein [Escherichia coli NC101]
 gi|307552078|gb|ADN44853.1| putative radC-like protein [Escherichia coli ABU 83972]
 gi|331054470|gb|EGI26479.1| intergenic-region protein [Escherichia coli TA206]
          Length = 158

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|170765890|ref|ZP_02900701.1| DNA repair protein, RadC family [Escherichia albertii TW07627]
 gi|260858467|ref|YP_003232358.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368]
 gi|331668235|ref|ZP_08369085.1| putative DNA repair protein [Escherichia coli TA271]
 gi|170125036|gb|EDS93967.1| DNA repair protein, RadC family [Escherichia albertii TW07627]
 gi|257757116|dbj|BAI28618.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368]
 gi|309702306|emb|CBJ01626.1| putative RadC-like DNA repair protein [Escherichia coli ETEC
           H10407]
 gi|323172584|gb|EFZ58218.1| DNA repair protein RadC family protein [Escherichia coli LT-68]
 gi|331064536|gb|EGI36445.1| putative DNA repair protein [Escherichia coli TA271]
          Length = 158

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|110640540|ref|YP_668268.1| RadC-like DNA repair protein [Escherichia coli 536]
 gi|191171181|ref|ZP_03032731.1| DNA repair protein, RadC family [Escherichia coli F11]
 gi|28316258|emb|CAD66203.1| hypothetical protein [Escherichia coli]
 gi|110342132|gb|ABG68369.1| RadC-like DNA repair protein [Escherichia coli 536]
 gi|190908481|gb|EDV68070.1| DNA repair protein, RadC family [Escherichia coli F11]
          Length = 158

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|315296395|gb|EFU55695.1| DNA repair protein RadC family protein [Escherichia coli MS 16-3]
          Length = 159

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 63  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 123 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 153


>gi|284922959|emb|CBG36051.1| putative DNA repair protein [Escherichia coli 042]
 gi|284924496|emb|CBG37630.1| putative RadC-like DNA repair protein [Escherichia coli 042]
 gi|323939702|gb|EGB35906.1| DNA repair protein RadC [Escherichia coli E482]
 gi|323961766|gb|EGB57367.1| DNA repair protein RadC [Escherichia coli H489]
          Length = 163

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 157


>gi|218691142|ref|YP_002399354.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|331681607|ref|ZP_08382243.1| intergenic-region protein [Escherichia coli H299]
 gi|218428706|emb|CAR09496.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|331081181|gb|EGI52343.1| intergenic-region protein [Escherichia coli H299]
          Length = 148

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 142


>gi|213425229|ref|ZP_03357979.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
          Length = 198

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 62/92 (67%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L    + S GT++HV V+  EIV+  ++L+A+++IL HNHPSG   PS AD
Sbjct: 102 IFLDAQHRVLQHSRLFS-GTLNHVEVHPCEIVREAIKLNASAVILAHNHPSGCAEPSKAD 160

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +I     ++I V DH+IIG+  +VSF
Sbjct: 161 KLITERVIKCCQFMDIRVLDHLIIGRGEYVSF 192


>gi|117626422|ref|YP_859745.1| putative radC-like protein YeeS [Escherichia coli APEC O1]
 gi|115515546|gb|ABJ03621.1| putative radC-like protein YeeS [Escherichia coli APEC O1]
 gi|323950295|gb|EGB46176.1| DNA repair protein RadC [Escherichia coli H252]
 gi|323954374|gb|EGB50158.1| DNA repair protein RadC [Escherichia coli H263]
          Length = 158

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|26247156|ref|NP_753196.1| putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|331673519|ref|ZP_08374284.1| DNA repair protein, RADC family [Escherichia coli TA280]
 gi|26107557|gb|AAN79756.1|AE016759_30 Putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|307553028|gb|ADN45803.1| DNA repair protein [Escherichia coli ABU 83972]
 gi|331069313|gb|EGI40703.1| DNA repair protein, RADC family [Escherichia coli TA280]
          Length = 158

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|301646528|ref|ZP_07246401.1| DNA repair protein RadC domain protein [Escherichia coli MS 146-1]
 gi|301075233|gb|EFK90039.1| DNA repair protein RadC domain protein [Escherichia coli MS 146-1]
          Length = 116

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 20  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 79

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 80  LITERLVQALGLVDIRVPDHLIVGGSQVFSF 110


>gi|261823583|ref|YP_003261689.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163]
 gi|261607596|gb|ACX90082.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163]
          Length = 221

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI+ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 125 LFLDNQHHVIRHQEMFVGTINSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I+     + I V DH++IG   +VSF
Sbjct: 185 AITEQIVKACLLMEIRVLDHLVIGHGEYVSF 215


>gi|145631180|ref|ZP_01786954.1| putative DNA repair radC-like protein [Haemophilus influenzae
           R3021]
 gi|144983278|gb|EDJ90769.1| putative DNA repair radC-like protein [Haemophilus influenzae
           R3021]
          Length = 156

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ + LI  EV  +G++  + V IREI+++ L+L+A++II+ HNHP+GN  PSDAD 
Sbjct: 60  LFLDRIHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      + I + DH I+   A   F
Sbjct: 120 YITKRLKEACELMEIKLLDHFIVSGSASFCF 150


>gi|91210173|ref|YP_540159.1| putative radC-like protein YeeS [Escherichia coli UTI89]
 gi|312966012|ref|ZP_07780238.1| DNA repair RadC family protein [Escherichia coli 2362-75]
 gi|91071747|gb|ABE06628.1| putative radC-like protein YeeS [Escherichia coli UTI89]
 gi|294490760|gb|ADE89516.1| DNA repair protein, RadC family [Escherichia coli IHE3034]
 gi|307627505|gb|ADN71809.1| putative DNA repair protein [Escherichia coli UM146]
 gi|312289255|gb|EFR17149.1| DNA repair RadC family protein [Escherichia coli 2362-75]
          Length = 158

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|237741852|ref|ZP_04572333.1| DNA repair protein radC [Fusobacterium sp. 4_1_13]
 gi|229429500|gb|EEO39712.1| DNA repair protein radC [Fusobacterium sp. 4_1_13]
          Length = 232

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI ++ + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKIINLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I   L     ++ +HIII K+++ SF
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSF 226


>gi|297618163|ref|YP_003703322.1| DNA repair protein RadC [Syntrophothermus lipocalidus DSM 12680]
 gi|297146000|gb|ADI02757.1| DNA repair protein RadC [Syntrophothermus lipocalidus DSM 12680]
          Length = 166

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N + A +V S G++    V+ RE+ +  +  S+ S+I +HNHPSG+P PS  DI
Sbjct: 70  LYLNSGNQVTAAQVVSIGSLSSTVVHPREVFKTAILTSSMSVIAIHNHPSGDPEPSSEDI 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L I V DHI+IG   F S +G++ I
Sbjct: 130 AVTKQLVEAGKILGIKVLDHIVIGNKRFWSMRGMKQI 166


>gi|121582506|ref|YP_974038.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|120608564|gb|ABM44303.1| DNA repair protein RadC [Acidovorax sp. JS42]
          Length = 164

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I      RGT+    VY RE+V+  L L+A ++I  HNHPSG P PS AD 
Sbjct: 68  IFLDAQNRVIEYIELFRGTLTQTSVYPREVVKTSLRLNAAAVIFAHNHPSGVPEPSRADE 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           N+T+ +   L  +++ V DH+++   A VSF  +GL
Sbjct: 128 NLTRVLKDALALVDVRVLDHVVVAGGASVSFAQRGL 163


>gi|323969877|gb|EGB65155.1| DNA repair protein RadC [Escherichia coli TA007]
          Length = 158

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|315614820|gb|EFU95458.1| DNA repair RadC family protein [Escherichia coli 3431]
          Length = 158

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|218561228|ref|YP_002394141.1| DNA repair protein; CP4-44 prophage [Escherichia coli S88]
 gi|218367997|emb|CAR05797.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli S88]
          Length = 148

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 142


>gi|186475352|ref|YP_001856822.1| DNA repair protein RadC [Burkholderia phymatum STM815]
 gi|184191811|gb|ACC69776.1| DNA repair protein RadC [Burkholderia phymatum STM815]
          Length = 242

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  SRG++  + VY REIV+R L ++A S+I+ HNHPSG   PS +D 
Sbjct: 146 LFLDTRHRLIRSEENSRGSLTRMAVYPREIVRRALSVNAASLIVAHNHPSGAVKPSASDR 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +  TL  +++ + DH++IG     SF
Sbjct: 206 QLTHVLRDTLALIDVQLIDHLVIGAHDTFSF 236


>gi|227115112|ref|ZP_03828768.1| DNA repair protein RadC [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 221

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI+ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 125 LFLDNQHHVIRHQEMFVGTINSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I+     + I V DH++IG   +VSF
Sbjct: 185 AITEQIVKACLLMEIRVLDHLVIGHGEYVSF 215


>gi|330505620|ref|YP_004382489.1| DNA repair protein RadC [Pseudomonas mendocina NK-01]
 gi|328919906|gb|AEB60737.1| DNA repair protein RadC [Pseudomonas mendocina NK-01]
          Length = 234

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 53/84 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV  RG+ID   VY R++V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 138 LFLDAKHRVLAFEVLFRGSIDSASVYPRQVVKRSLANNAAAVILTHNHPSGVSEPSQADR 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +TQ +   L  + + V DH I+G
Sbjct: 198 VLTQRLKDALALVEVRVLDHFIVG 221


>gi|253690461|ref|YP_003019651.1| DNA repair protein RadC [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259551881|sp|C6DIC1|Y4100_PECCP RecName: Full=UPF0758 protein PC1_4100
 gi|251757039|gb|ACT15115.1| DNA repair protein RadC [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 221

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI+ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 125 LFLDNQHHVIRHQEMFVGTINSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I+     + I V DH++IG   +VSF
Sbjct: 185 AITEQIVKACLLMEIRVLDHLVIGHGEYVSF 215


>gi|238028403|ref|YP_002912634.1| DNA repair protein RadC [Burkholderia glumae BGR1]
 gi|237877597|gb|ACR29930.1| DNA repair protein RadC [Burkholderia glumae BGR1]
          Length = 266

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+ DE  + GT+  + VY REIV+R LEL A ++I+ HNHPSG   PS  D 
Sbjct: 170 LYLDAQHRLVHDEEATHGTLTRMAVYPREIVRRALELKAAALIVAHNHPSGAVRPSAEDR 229

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DHI++G     SF
Sbjct: 230 RLTRVLHDALALVDVRLIDHIVVGASETFSF 260


>gi|218702486|ref|YP_002410115.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           IAI39]
 gi|218372472|emb|CAR20348.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           IAI39]
          Length = 163

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+IIG     SF
Sbjct: 127 LITERLVQALALVDIRVPDHLIIGGSQVFSF 157


>gi|194426265|ref|ZP_03058820.1| DNA repair protein, RadC family [Escherichia coli B171]
 gi|194415573|gb|EDX31840.1| DNA repair protein, RadC family [Escherichia coli B171]
 gi|323161557|gb|EFZ47445.1| DNA repair protein RadC family protein [Escherichia coli E128010]
          Length = 158

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADQ 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|254692435|emb|CAR48078.1| hypothetical protein [Escherichia coli]
          Length = 148

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADQ 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 142


>gi|331654132|ref|ZP_08355132.1| putative DNA repair protein [Escherichia coli M718]
 gi|331047514|gb|EGI19591.1| putative DNA repair protein [Escherichia coli M718]
          Length = 163

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 157


>gi|154246981|ref|YP_001417939.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2]
 gi|154161066|gb|ABS68282.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2]
          Length = 209

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 42/50 (84%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLDK N LIADEV   GT+DH PVY RE+V+R LE+SA+++IL+HNHP+
Sbjct: 138 LFLDKRNQLIADEVLQTGTVDHAPVYPREVVKRALEVSASAVILLHNHPT 187


>gi|134300388|ref|YP_001113884.1| DNA repair protein RadC [Desulfotomaculum reducens MI-1]
 gi|172044335|sp|A4J7K6|Y2549_DESRM RecName: Full=UPF0758 protein Dred_2549
 gi|134053088|gb|ABO51059.1| DNA replication and repair protein RadC [Desulfotomaculum reducens
           MI-1]
          Length = 227

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N ++A E  S GT++   V+ RE+ +  +  SA S+ILVHNHPSG+P PS  DI
Sbjct: 131 LLLNTKNQVLARETISIGTLNSSVVHPRELFKVAIRRSAASMILVHNHPSGDPTPSREDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +I     + I V DHIIIG + F S K
Sbjct: 191 VLTKRLIEAGEIIGIDVLDHIIIGDNKFTSLK 222


>gi|188589437|ref|YP_001919945.1| DNA repair protein RadC [Clostridium botulinum E3 str. Alaska E43]
 gi|238689648|sp|B2V090|Y547_CLOBA RecName: Full=UPF0758 protein CLH_0547
 gi|188499718|gb|ACD52854.1| DNA repair protein RadC [Clostridium botulinum E3 str. Alaska E43]
          Length = 229

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  NI+I  +   +G+++   V+ REI +  +  S+T II+ HNHPSG+P PS  DI
Sbjct: 133 IFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSTKIIICHNHPSGDPTPSKEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N+T  I      + I + DHIIIGK+ F+S K
Sbjct: 193 NITLRIKECGEIMGIQLLDHIIIGKNGFISLK 224


>gi|260912778|ref|ZP_05919264.1| DNA repair protein RadC [Pasteurella dagmatis ATCC 43325]
 gi|260633156|gb|EEX51321.1| DNA repair protein RadC [Pasteurella dagmatis ATCC 43325]
          Length = 214

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    LI  E    GTI+   V+ REI++  L  +A ++IL HNHPSG   PS++D 
Sbjct: 118 LFLDNQQRLIKQEEMFLGTINMATVHPREIIKAALYCNAAALILAHNHPSGIAEPSESDK 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ I      + I + DH IIGK  + SF
Sbjct: 178 RITQKIKNVAELMEIRILDHFIIGKGCYTSF 208


>gi|57545665|gb|AAW51756.1| Aec73 [Escherichia coli]
          Length = 163

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+IIG     SF
Sbjct: 127 LITERLVQALALVDIRVPDHLIIGGSQVFSF 157


>gi|330720900|gb|EGG99083.1| DNA repair protein RadC [gamma proteobacterium IMCC2047]
          Length = 97

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 55/91 (60%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          ++LD  + LI  +    GTID   VY RE+V+  +E +A ++IL HNHPSG   PS AD 
Sbjct: 1  MYLDSQHRLIRYQPHFYGTIDSASVYPRELVKSAIEYNAAAVILAHNHPSGVAEPSQADR 60

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           +T+ +   ++ + + V DH+++G    VSF
Sbjct: 61 QITEQVRKAMSLIGVRVLDHMVVGDSEVVSF 91


>gi|330808765|ref|YP_004353227.1| putative DNA repair protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376873|gb|AEA68223.1| putative DNA repair protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 163

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A E    GTID V VY R I+QR LE    +II+ HNHPSG+  PS  DI
Sbjct: 67  LFLDARHRVVAYEPLFYGTIDVVNVYPRRILQRALEHQCAAIIVAHNHPSGDTIPSPGDI 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  LN+ + DH IIG+    SF
Sbjct: 127 QITKTLSDVLPKLNVRLLDHFIIGEGEPYSF 157


>gi|254482762|ref|ZP_05096000.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2148]
 gi|214037121|gb|EEB77790.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2148]
          Length = 193

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++  E    GT+D   VY RE+  R L+  A ++I  HNHPSG   PS AD 
Sbjct: 97  IFLDNQHRIMRCEDLFLGTLDGAAVYPREVAVRALQYRAAAVIFAHNHPSGVAEPSSADK 156

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  L+I V DHII+G     SF
Sbjct: 157 RITERLVAALGLLDIRVLDHIIVGSGCEFSF 187


>gi|187731500|ref|YP_001882335.1| DNA repair protein RadC [Shigella boydii CDC 3083-94]
 gi|238691678|sp|B2TTV2|YICR_SHIB3 RecName: Full=UPF0758 protein yicR
 gi|187428492|gb|ACD07766.1| DNA repair protein RadC [Shigella boydii CDC 3083-94]
          Length = 222

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 60/91 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ II +   +++ V DHI+IG+   VSF
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGENVSF 216


>gi|18265919|gb|AAL67392.1|AF447814_60 putative intergenic-region protein [Escherichia coli]
          Length = 260

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 164 LYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 223

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 224 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 254


>gi|298368845|ref|ZP_06980163.1| DNA repair protein RadC [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282848|gb|EFI24335.1| DNA repair protein RadC [Neisseria sp. oral taxon 014 str. F0314]
          Length = 225

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+I+ HNHP G+  PS+ADI
Sbjct: 128 LLLNRQNQLIAMRELSRGTVAENTVYIREIVKLALDEYADSLIIAHNHPGGSARPSEADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ +   L+ +++ + DH I+      S +
Sbjct: 188 GFTKRLAQALDLVDVSLLDHFIVTAKEVCSLR 219


>gi|191167170|ref|ZP_03028990.1| DNA repair protein, RadC family [Escherichia coli B7A]
 gi|190902827|gb|EDV62556.1| DNA repair protein, RadC family [Escherichia coli B7A]
          Length = 158

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLTHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|91211289|ref|YP_541275.1| hypothetical protein UTI89_C2276 [Escherichia coli UTI89]
 gi|91213942|ref|YP_543928.1| hypothetical protein UTI89_C4994 [Escherichia coli UTI89]
 gi|110644738|ref|YP_672468.1| putative DNA repair protein [Escherichia coli 536]
 gi|191170846|ref|ZP_03032398.1| DNA repair protein, RadC family [Escherichia coli F11]
 gi|23954299|emb|CAD42098.1| hypothetical protein [Escherichia coli]
 gi|91072863|gb|ABE07744.1| hypothetical protein UTI89_C2276 [Escherichia coli UTI89]
 gi|91075516|gb|ABE10397.1| hypothetical protein UTI89_C4994 [Escherichia coli UTI89]
 gi|110346330|gb|ABG72567.1| putative DNA repair protein [Escherichia coli 536]
 gi|190909070|gb|EDV68657.1| DNA repair protein, RadC family [Escherichia coli F11]
 gi|307626452|gb|ADN70756.1| putative DNA repair protein [Escherichia coli UM146]
 gi|307629456|gb|ADN73760.1| putative DNA repair protein [Escherichia coli UM146]
 gi|330907975|gb|EGH36494.1| putative radC-like protein yeeS [Escherichia coli AA86]
          Length = 158

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|331650180|ref|ZP_08351253.1| DNA repair protein RadC [Escherichia coli M605]
 gi|331041125|gb|EGI13282.1| DNA repair protein RadC [Escherichia coli M605]
          Length = 163

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+IIG     SF
Sbjct: 127 LITERLVQALALVDIRVPDHLIIGGSQVFSF 157


>gi|301648526|ref|ZP_07248250.1| DNA repair protein RadC domain protein [Escherichia coli MS 146-1]
 gi|301073429|gb|EFK88235.1| DNA repair protein RadC domain protein [Escherichia coli MS 146-1]
          Length = 116

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 20  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 79

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 80  LITERLVQALGLVDIRVPDHLIVGGSQVFSF 110


>gi|221135334|ref|ZP_03561637.1| DNA repair protein RadC [Glaciecola sp. HTCC2999]
          Length = 213

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  ++H  L   E+ S GTI+   VY REIV+  L+ +A ++IL HNHPSG P PS ADI
Sbjct: 117 LLNNQHEFLHYKELFS-GTINAASVYPREIVKYALDYNAANVILAHNHPSGTPEPSQADI 175

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ I   L+ +++ V DHI++G    VS 
Sbjct: 176 AITQRIRQALDLIDVQVLDHIVVGAGNAVSL 206


>gi|309704104|emb|CBJ03451.1| putative radC-like protein [Escherichia coli ETEC H10407]
          Length = 158

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+IIG     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIIGGSQVFSF 152


>gi|308047854|ref|YP_003911420.1| DNA repair protein RadC [Ferrimonas balearica DSM 9799]
 gi|307630044|gb|ADN74346.1| DNA repair protein RadC [Ferrimonas balearica DSM 9799]
          Length = 227

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           L LD +H +L   E+ SRGTID   VY RE+V+  L+ +A ++IL HNHPSG   PS AD
Sbjct: 131 LLLDSQHRVLQTIEL-SRGTIDAAQVYPREVVKTALKANAAAVILAHNHPSGVAEPSQAD 189

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            ++T  I   L  +++ V DH+++G+    SF
Sbjct: 190 RHITGRIQQALALVDVSVLDHLVVGRGQSCSF 221


>gi|295110011|emb|CBL23964.1| DNA replication and repair protein RadC [Ruminococcus obeum A2-162]
          Length = 236

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 54/92 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+ D + S+GT++   +  REI    L   A ++IL+HNHP GNP+PS  D 
Sbjct: 135 MMLDNQNHLLGDTLLSKGTVNATLITPREIFLEALRYHAVNLILIHNHPGGNPSPSVCDK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ I      L I + DHIIIG   +VSF+
Sbjct: 195 EITERISQAGEMLGICLLDHIIIGDQRYVSFR 226


>gi|225010502|ref|ZP_03700973.1| DNA repair protein RadC [Flavobacteria bacterium MS024-3C]
 gi|225005331|gb|EEG43282.1| DNA repair protein RadC [Flavobacteria bacterium MS024-3C]
          Length = 231

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N+LI   +  +G      V IR ++Q+ +   AT++I+ HNHP+GN  PS +D 
Sbjct: 135 LYLDNSNVLIERSLLGKGGFTATVVDIRLVLQQAIRWGATAMIVAHNHPTGNLKPSHSDK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +      L+I + DHII+GK+ + SF
Sbjct: 195 ALTQKLKEAAKVLDIKLLDHIIVGKNEYFSF 225


>gi|193071485|ref|ZP_03052397.1| DNA repair protein, RadC family [Escherichia coli E110019]
 gi|331668227|ref|ZP_08369078.1| putative DNA repair protein [Escherichia coli TA271]
 gi|192955207|gb|EDV85698.1| DNA repair protein, RadC family [Escherichia coli E110019]
 gi|331064545|gb|EGI36453.1| putative DNA repair protein [Escherichia coli TA271]
          Length = 158

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSF 152


>gi|253689260|ref|YP_003018450.1| DNA repair protein RadC [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755838|gb|ACT13914.1| DNA repair protein RadC [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 157

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  EV + G I+   V+ REI++  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQHRLIEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           N+T  +  +L+ L++ V DH+++G    VSF
Sbjct: 121 NITDRLKDSLSQLDVKVLDHLVVGSTEVVSF 151


>gi|293400888|ref|ZP_06645033.1| DNA repair protein RadC [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305914|gb|EFE47158.1| DNA repair protein RadC [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 225

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N ++       GT+    V+ REI +  ++     II VHNHPSG+  PSDADI
Sbjct: 128 LFLDQRNHVLCYRTMFMGTLTSASVHPREIFKEAMQQGCAKIICVHNHPSGDATPSDADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I + DHII+ ++ ++SF+  R++
Sbjct: 188 TLTKAIQEAGKMVAIPLIDHIIVARNTYISFRQKRLM 224


>gi|319637952|ref|ZP_07992718.1| DNA repair protein radC [Neisseria mucosa C102]
 gi|317401107|gb|EFV81762.1| DNA repair protein radC [Neisseria mucosa C102]
          Length = 224

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+IL HNHP G+  PS++D+
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGGSARPSESDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ +   L+ ++I + DH I+      S +
Sbjct: 188 QFTERLKQALSLVDITLLDHFIVTAKETCSLR 219


>gi|146309390|ref|YP_001189855.1| DNA repair protein RadC [Pseudomonas mendocina ymp]
 gi|166218789|sp|A4Y0K7|Y4376_PSEMY RecName: Full=UPF0758 protein Pmen_4376
 gi|145577591|gb|ABP87123.1| DNA replication and repair protein RadC [Pseudomonas mendocina ymp]
          Length = 224

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 53/84 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV  RG+ID   VY R++V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDAKHRVLAFEVLFRGSIDSASVYPRQVVKRALANNAAAVILTHNHPSGVCEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +TQ +   L  + + V DH I+G
Sbjct: 188 VLTQRLKDALALVEVRVLDHFIVG 211


>gi|295397226|ref|ZP_06807325.1| DNA repair protein RadC [Aerococcus viridans ATCC 11563]
 gi|294974535|gb|EFG50263.1| DNA repair protein RadC [Aerococcus viridans ATCC 11563]
          Length = 241

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++ ++    G+++    + REI +  +  SA  II+ HNHPSGNP+PS ADI
Sbjct: 144 LYLNTKNQIVKEKTIFVGSLNASVAHPREIFKEGVRASAARIIVAHNHPSGNPSPSQADI 203

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N T+ +    + + I + DHII+G DAF+S +
Sbjct: 204 NFTRRLAEVGDLIGIEILDHIIVGGDAFLSLQ 235


>gi|199597494|ref|ZP_03210923.1| DNA repair protein [Lactobacillus rhamnosus HN001]
 gi|199591517|gb|EDY99594.1| DNA repair protein [Lactobacillus rhamnosus HN001]
          Length = 222

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I +++ + GT+D      R + +  L+LSAT++I+VHNHPSG+P+PS AD 
Sbjct: 124 LFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           + T         L + + DH+IIG+  + SF
Sbjct: 184 DTTTRFQLAAALLGMHLLDHLIIGRQTYYSF 214


>gi|331685379|ref|ZP_08385965.1| putative DNA repair protein [Escherichia coli H299]
 gi|323939165|gb|EGB35379.1| DNA repair protein RadC [Escherichia coli E482]
 gi|331077750|gb|EGI48962.1| putative DNA repair protein [Escherichia coli H299]
          Length = 158

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+IIG     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIIGGSQVFSF 152


>gi|323160906|gb|EFZ46830.1| DNA repair protein RadC family protein [Escherichia coli E128010]
          Length = 158

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSF 152


>gi|301304122|ref|ZP_07210238.1| putative DNA repair protein RadC [Escherichia coli MS 124-1]
 gi|300840535|gb|EFK68295.1| putative DNA repair protein RadC [Escherichia coli MS 124-1]
 gi|315252292|gb|EFU32260.1| putative DNA repair protein RadC [Escherichia coli MS 85-1]
          Length = 163

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGNQVFSF 157


>gi|170683005|ref|YP_001745192.1| RadC family DNA repair protein [Escherichia coli SMS-3-5]
 gi|170520723|gb|ACB18901.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5]
          Length = 158

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSF 152


>gi|26250393|ref|NP_756433.1| putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|26110823|gb|AAN83007.1|AE016769_122 Putative radC-like protein yeeS [Escherichia coli CFT073]
          Length = 148

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGNQVFSF 142


>gi|323955396|gb|EGB51165.1| DNA repair protein RadC [Escherichia coli H263]
          Length = 98

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 2  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 61

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 62 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 92


>gi|331654133|ref|ZP_08355133.1| putative DNA repair protein [Escherichia coli M718]
 gi|331047515|gb|EGI19592.1| putative DNA repair protein [Escherichia coli M718]
          Length = 105

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 9  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 68

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 69 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 99


>gi|213019779|ref|ZP_03335582.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212994609|gb|EEB55254.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 221

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++ D+   L  +EV + GT+D VP YIRE+ ++ L   ATSII+ HNHP G   PSD D 
Sbjct: 126 IYFDQKCHLKGEEVFT-GTVDKVPFYIREVTRKALIRKATSIIISHNHPEGRLKPSDEDE 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+++      + I + DHIII    + SFK
Sbjct: 185 AVTKDLAKACQTIGIRLLDHIIITSVGYFSFK 216


>gi|268593307|ref|ZP_06127528.1| DNA repair protein RadC [Providencia rettgeri DSM 1131]
 gi|291311004|gb|EFE51457.1| DNA repair protein RadC [Providencia rettgeri DSM 1131]
          Length = 239

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +I  E   +GT++ V V+ REI++  ++++A  IIL HNHPSGNP PS AD 
Sbjct: 143 IFLNNKNQIICHEELFKGTLNKVEVHPREIIRFAIKMNANGIILAHNHPSGNPEPSTADR 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I + DH ++G    VSF
Sbjct: 203 QVTERIQRACAIMGIKLLDHFVVGHKQCVSF 233


>gi|225630427|ref|YP_002727218.1| DNA repair protein RadC [Wolbachia sp. wRi]
 gi|225592408|gb|ACN95427.1| DNA repair protein RadC [Wolbachia sp. wRi]
          Length = 219

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD+   LI + +Q  GTID VP+Y+REI+++ L + A+SI + HNHPSG+  PS  D 
Sbjct: 123 IYLDRSGHLIYEYIQDCGTIDRVPLYVREIIKQGLLIDASSIAISHNHPSGDTEPSKEDE 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           + T  +  T   + + + DHII+ + +  SF
Sbjct: 183 DNTLTLAATCENVGMKLIDHIIVTQKSHFSF 213


>gi|226942456|ref|YP_002797529.1| DNA repair protein RadC [Azotobacter vinelandii DJ]
 gi|259551855|sp|C1DI57|Y294_AZOVD RecName: Full=UPF0758 protein Avin_02940
 gi|226717383|gb|ACO76554.1| P-pantothenate cysteine ligase / P-pantothenoylcysteine
           decarboxylase [Azotobacter vinelandii DJ]
          Length = 224

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 55/84 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV  +GT+D   VY R++++R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDAKHRVLAFEVLFQGTVDGASVYPRQVLKRALAHNAAALILTHNHPSGIAEPSQADF 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           ++T+ +   L  +++ V DH I+G
Sbjct: 188 SLTRRLKEALALVDVRVLDHFIVG 211


>gi|121582744|ref|YP_973186.1| DNA repair protein RadC [Polaromonas naphthalenivorans CJ2]
 gi|120596006|gb|ABM39444.1| DNA repair protein RadC [Polaromonas naphthalenivorans CJ2]
          Length = 168

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI      RGT+    VY RE+V+  L L+A ++I  HNHPSG   PS AD 
Sbjct: 72  LMLDAQNRLIEYVELFRGTVSQASVYPREVVKESLALNAAAVIFCHNHPSGVAEPSRADE 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ + T L+ +++ V DH+I+  +  +SF  +GL
Sbjct: 132 VLTQTLKTALSLVDVRVLDHLIVAGNEIMSFAERGL 167


>gi|300818066|ref|ZP_07098279.1| putative DNA repair protein RadC [Escherichia coli MS 107-1]
 gi|301330444|ref|ZP_07223068.1| putative DNA repair protein RadC [Escherichia coli MS 78-1]
 gi|47155002|emb|CAE85201.1| YeeS protein [Escherichia coli]
 gi|300529476|gb|EFK50538.1| putative DNA repair protein RadC [Escherichia coli MS 107-1]
 gi|300843599|gb|EFK71359.1| putative DNA repair protein RadC [Escherichia coli MS 78-1]
          Length = 163

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSF 157


>gi|320195796|gb|EFW70421.1| DNA repair protein RadC [Escherichia coli WV_060327]
          Length = 150

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+  E+  RGT++ V V+ RE+++R L+ +A ++ILVHNHPSG P P   DI
Sbjct: 54  ILLDNQNQLLHREILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPRRCDI 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L  L++ + DH I+     VS   +GL
Sbjct: 114 KLTKKLQELLEMLDVRLLDHFIVAGTETVSMAERGL 149


>gi|331650414|ref|ZP_08351486.1| putative DNA repair protein [Escherichia coli M605]
 gi|331040808|gb|EGI12966.1| putative DNA repair protein [Escherichia coli M605]
          Length = 157

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+  E    GTI+   V+ REIV+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQNRLLKHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T NI+ TL+ + + V DH IIG    +SF
Sbjct: 121 LITTNIVKTLDLVKVRVLDHFIIGAGDVLSF 151


>gi|227112487|ref|ZP_03826143.1| hypothetical protein PcarbP_05962 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 157

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI  EV + G I+   V+ REI++  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQNRLIEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGCAEPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T  +  +L+ L++ V DH+++G    VSF
Sbjct: 121 HITDKLKESLSQLDVRVLDHLVVGGAEVVSF 151


>gi|323971802|gb|EGB67027.1| DNA repair protein RadC [Escherichia coli TA007]
          Length = 158

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSF 152


>gi|15640534|ref|NP_230161.1| DNA repair protein RadC-related protein [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|153822183|ref|ZP_01974850.1| DNA repair protein RadC family protein [Vibrio cholerae B33]
 gi|229509016|ref|ZP_04398504.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229519684|ref|ZP_04409127.1| DNA repair protein RadC [Vibrio cholerae RC9]
 gi|229606200|ref|YP_002876848.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|254850747|ref|ZP_05240097.1| DNA repair protein RadC family protein [Vibrio cholerae MO10]
 gi|13431999|sp|Q9KUK8|Y510_VIBCH RecName: Full=UPF0758 protein VC_0510
 gi|9654937|gb|AAF93680.1| DNA repair protein RadC-related protein [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|126520318|gb|EAZ77541.1| DNA repair protein RadC family protein [Vibrio cholerae B33]
 gi|229344373|gb|EEO09348.1| DNA repair protein RadC [Vibrio cholerae RC9]
 gi|229353941|gb|EEO18875.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229368855|gb|ACQ59278.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|254846452|gb|EET24866.1| DNA repair protein RadC family protein [Vibrio cholerae MO10]
          Length = 157

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +  TL  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDTLALVDVRVLDHIVTG-DTCTSF 151


>gi|327395780|dbj|BAK13202.1| DNA repair protein RadC RadC [Pantoea ananatis AJ13355]
          Length = 228

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 61/92 (66%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H ++ A ++ S G+I+ V V+ REIV+  L+++A ++I+ HNHPSG   PS AD
Sbjct: 132 MFLDNQHRVITARQMFS-GSINSVEVHPREIVREALKINAAALIIAHNHPSGRAEPSQAD 190

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            ++T  I      +NI V DH++IG+   VSF
Sbjct: 191 RDITVKICEACRLVNIRVLDHLVIGRGESVSF 222


>gi|319410519|emb|CBY90882.1| putative DNA repair protein RadC [Neisseria meningitidis WUE 2594]
          Length = 225

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ +   ++ +++ + DH I+      SF+
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTAQTVRSFR 219


>gi|218692705|ref|YP_002400917.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|218430269|emb|CAR11137.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
          Length = 163

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSF 157


>gi|91784617|ref|YP_559823.1| DNA repair protein RadC [Burkholderia xenovorans LB400]
 gi|40019185|emb|CAE92909.1| putative DNA repair protein [Pseudomonas putida]
 gi|91688571|gb|ABE31771.1| DNA repair protein RadC [Burkholderia xenovorans LB400]
          Length = 164

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 54/84 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL A +++  H HPSG+  PS+AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINSTAVYPRVVVQRVLELKAAAVVFAHQHPSGSTEPSNADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +TQ +   L  +++ + DHI++G
Sbjct: 128 ALTQRLQAALALIDVRLLDHIVVG 151


>gi|332175969|gb|AEE25222.1| DNA repair protein RadC [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 149

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+ HN ++  E    GT+ H  VY REI ++ L+  A S+IL HNHPSG+   S +D 
Sbjct: 53  IYLNVHNEMLNYEEVFLGTVSHASVYPREIAKKALDCGAESVILAHNHPSGSLQVSASDE 112

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+NI + L  L+I V DHII+      SF  L ++
Sbjct: 113 CVTENIQSALRTLDIGVQDHIIVSHSGTTSFVDLNLL 149


>gi|291619457|ref|YP_003522199.1| RadC [Pantoea ananatis LMG 20103]
 gi|291154487|gb|ADD79071.1| RadC [Pantoea ananatis LMG 20103]
          Length = 228

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 61/92 (66%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H ++ A ++ S G+I+ V V+ REIV+  L+++A ++I+ HNHPSG   PS AD
Sbjct: 132 MFLDNQHRVITARQMFS-GSINSVEVHPREIVREALKINAAALIIAHNHPSGRAEPSQAD 190

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            ++T  I      +NI V DH++IG+   VSF
Sbjct: 191 RDITVKICEACRLVNIRVLDHLVIGRGESVSF 222


>gi|323960883|gb|EGB56503.1| DNA repair protein RadC [Escherichia coli H489]
          Length = 163

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSF 157


>gi|292486566|ref|YP_003529434.1| glutaredoxin 3 [Erwinia amylovora CFBP1430]
 gi|292897804|ref|YP_003537173.1| DNA repair protein [Erwinia amylovora ATCC 49946]
 gi|291197652|emb|CBJ44747.1| DNA repair protein [Erwinia amylovora ATCC 49946]
 gi|291551981|emb|CBA19018.1| Glutaredoxin 3 [Erwinia amylovora CFBP1430]
 gi|312170627|emb|CBX78890.1| Glutaredoxin 3 [Erwinia amylovora ATCC BAA-2158]
          Length = 223

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            F ++H ++   E+ S GT++ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 128 FFDNQHRVIHTSEMFS-GTLNSVEVHPREIVREALKRNAAALILAHNHPSGLAEPSRADR 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T  I+   + +NI V DH++IG+  +VSF
Sbjct: 187 DITLQIVRACSLMNIRVLDHMVIGRGEYVSF 217


>gi|225075521|ref|ZP_03718720.1| hypothetical protein NEIFLAOT_00534 [Neisseria flavescens
           NRL30031/H210]
 gi|224953156|gb|EEG34365.1| hypothetical protein NEIFLAOT_00534 [Neisseria flavescens
           NRL30031/H210]
          Length = 230

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+IL HNHP G+  PS++D+
Sbjct: 134 LLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGGSARPSESDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ +   L+ ++I + DH I+      S +
Sbjct: 194 QFTERLKQALSLVDITLLDHFIVTAKETCSLR 225


>gi|157154969|ref|YP_001464407.1| RadC family DNA repair protein [Escherichia coli E24377A]
 gi|157076999|gb|ABV16707.1| DNA repair protein, RadC family [Escherichia coli E24377A]
          Length = 158

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSF 152


>gi|109896377|ref|YP_659632.1| DNA repair protein RadC [Pseudoalteromonas atlantica T6c]
 gi|123361460|sp|Q15ZW0|Y046_PSEA6 RecName: Full=UPF0758 protein Patl_0046
 gi|109698658|gb|ABG38578.1| DNA repair protein RadC [Pseudoalteromonas atlantica T6c]
          Length = 224

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI       GTID   VY R +V++ LE +A ++IL HNHPSG   PS AD 
Sbjct: 128 LLLDSQHQLIKFRKMFFGTIDSASVYPRVLVKQALEDNAAAVILTHNHPSGVAEPSQADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           ++T  II+ ++ L+I V DH+++G    VSF  +GL
Sbjct: 188 HITARIISAMSLLDIKVLDHLVVGDGVAVSFAERGL 223


>gi|315256374|gb|EFU36342.1| putative DNA repair protein RadC [Escherichia coli MS 85-1]
          Length = 158

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSF 152


>gi|293416392|ref|ZP_06659031.1| radC-like protein yeeS [Escherichia coli B185]
 gi|291431748|gb|EFF04731.1| radC-like protein yeeS [Escherichia coli B185]
          Length = 158

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSF 152


>gi|194335153|ref|YP_002019719.1| DNA repair protein RadC [Prosthecochloris aestuarii DSM 271]
 gi|194312971|gb|ACF47365.1| DNA repair protein RadC [Prosthecochloris aestuarii DSM 271]
          Length = 165

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +I  E+ SRGT++   V+ RE+ +     +A SI+L HNHPSGN  PS AD 
Sbjct: 69  LYLDTKNKIIGLEMISRGTLNASLVHPREVFKGAFLANANSIMLAHNHPSGNTEPSSADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T  ++     L++ V DHII+G   + SF+
Sbjct: 129 LVTSRLVKAGKLLDLQVLDHIIVGDKGYYSFR 160


>gi|68248652|ref|YP_247764.1| putative DNA repair radC-like protein [Haemophilus influenzae
           86-028NP]
 gi|68056851|gb|AAX87104.1| putative DNA repair radC-like protein [Haemophilus influenzae
           86-028NP]
 gi|309750579|gb|ADO80563.1| putative DNA repair protein [Haemophilus influenzae R2866]
          Length = 156

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ + LI  EV  +G++    V IREI+++ L+L+A++II+ HNHP+GN  PSDAD 
Sbjct: 60  LFLDRIHRLIKSEVMFQGSVSETSVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      ++I + DH I+   A   F
Sbjct: 120 YITKRLKEACELMDIKLLDHFIVSGSASFCF 150


>gi|322421682|ref|YP_004200905.1| DNA repair protein RadC [Geobacter sp. M18]
 gi|320128069|gb|ADW15629.1| DNA repair protein RadC [Geobacter sp. M18]
          Length = 231

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I     S G+++   V+ RE+    +  SA ++IL+HNHP+G+P PS  D+
Sbjct: 135 LLLDGKNRIITRAQISEGSLNQSIVHPREVFNAAVRQSAAAMILLHNHPTGDPTPSPEDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      + I V DHIIIG+DAF SF
Sbjct: 195 EVTRRLCEAGQLMGIRVLDHIIIGEDAFYSF 225


>gi|227883870|ref|ZP_04001675.1| DNA repair protein RadC [Escherichia coli 83972]
 gi|300984866|ref|ZP_07177154.1| putative DNA repair protein RadC [Escherichia coli MS 45-1]
 gi|307312940|ref|ZP_07592568.1| DNA repair protein RadC [Escherichia coli W]
 gi|227839148|gb|EEJ49614.1| DNA repair protein RadC [Escherichia coli 83972]
 gi|300408295|gb|EFJ91833.1| putative DNA repair protein RadC [Escherichia coli MS 45-1]
 gi|306907108|gb|EFN37615.1| DNA repair protein RadC [Escherichia coli W]
 gi|307555795|gb|ADN48570.1| conserved phage-associated protein [Escherichia coli ABU 83972]
 gi|315063591|gb|ADT77918.1| DNA Repair Protein [Escherichia coli W]
 gi|315292951|gb|EFU52303.1| putative DNA repair protein RadC [Escherichia coli MS 153-1]
 gi|323380328|gb|ADX52596.1| DNA repair protein RadC [Escherichia coli KO11]
          Length = 157

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+  E    GTI+   V+ REIV+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T NI+ TL+ + + V DH IIG    +SF
Sbjct: 121 LITTNIVKTLDLVKVRVLDHFIIGAGDVLSF 151


>gi|194449680|ref|YP_002048317.1| DNA repair protein, RadC family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194407984|gb|ACF68203.1| DNA repair protein, RadC family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
          Length = 158

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSF 152


>gi|323152386|gb|EFZ38674.1| DNA repair radC domain protein [Escherichia coli EPECa14]
          Length = 148

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSF 142


>gi|307556532|gb|ADN49307.1| DNA repair protein [Escherichia coli ABU 83972]
          Length = 158

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSF 152


>gi|300903084|ref|ZP_07121021.1| putative DNA repair protein RadC [Escherichia coli MS 84-1]
 gi|300404861|gb|EFJ88399.1| putative DNA repair protein RadC [Escherichia coli MS 84-1]
          Length = 163

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSF 157


>gi|260893389|ref|YP_003239486.1| DNA repair protein RadC [Ammonifex degensii KC4]
 gi|260865530|gb|ACX52636.1| DNA repair protein RadC [Ammonifex degensii KC4]
          Length = 232

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+  E  + G ++   V  RE+ +  +  SA ++ILVHNHPSG+P PS  D+
Sbjct: 136 ILLDTKNQLLGIETVAVGGLNSAGVLPREVFRAAVRRSACALILVHNHPSGDPTPSGEDL 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++   + L I V DH+IIG + +VS K
Sbjct: 196 ALTRRLVQAGDLLGIEVLDHLIIGDNCYVSLK 227


>gi|121608622|ref|YP_996429.1| DNA repair protein RadC [Verminephrobacter eiseniae EF01-2]
 gi|171769486|sp|A1WIF4|Y1654_VEREI RecName: Full=UPF0758 protein Veis_1654
 gi|121553262|gb|ABM57411.1| DNA repair protein RadC [Verminephrobacter eiseniae EF01-2]
          Length = 237

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V   L   A +++L HNHPSG+  PS AD 
Sbjct: 141 LFLDNQNRLLAMEELFRGTLTQTSVYPREVVLHALHHRAAAVVLAHNHPSGSVQPSRADE 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + +TL  +++ V DH+I+     +S   + ++
Sbjct: 201 ALTQTLKSTLALVDVRVLDHVIVAPGQALSMAEMGLL 237


>gi|309704613|emb|CBJ03963.1| putative radC DNA repair protein [Escherichia coli ETEC H10407]
          Length = 148

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSF 142


>gi|34762350|ref|ZP_00143353.1| DNA repair protein radC [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27888004|gb|EAA25068.1| DNA repair protein radC [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 232

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI ++ + L+A S+IL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSIGTLDRSSVYPREIYKKIINLNAKSVILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I   L     ++ +HIII K+++ SF
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSF 226


>gi|237745564|ref|ZP_04576044.1| DNA repair protein radC [Oxalobacter formigenes HOxBLS]
 gi|229376915|gb|EEO27006.1| DNA repair protein radC [Oxalobacter formigenes HOxBLS]
          Length = 224

 Score = 75.1 bits (183), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI      RGT+ H  VY RE+V+  L  +A ++I  HNHP G+  PS+AD 
Sbjct: 128 LFLDIKNKLIESSEMFRGTLSHTSVYPREVVKAALGRNAANVIFAHNHPFGSAEPSNADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+++   L  ++I V DHII+      SF
Sbjct: 188 TLTRSLKQALGLVDIRVLDHIIVAGKNTYSF 218


>gi|110643167|ref|YP_670897.1| putative radC-like protein YeeS [Escherichia coli 536]
 gi|191171912|ref|ZP_03033458.1| DNA repair protein, RadC family [Escherichia coli F11]
 gi|194436803|ref|ZP_03068903.1| DNA repair protein, RadC family [Escherichia coli 101-1]
 gi|260855983|ref|YP_003229874.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368]
 gi|110344759|gb|ABG70996.1| putative radC-like protein YeeS [Escherichia coli 536]
 gi|190907947|gb|EDV67540.1| DNA repair protein, RadC family [Escherichia coli F11]
 gi|194424285|gb|EDX40272.1| DNA repair protein, RadC family [Escherichia coli 101-1]
 gi|257754632|dbj|BAI26134.1| predicted DNA repair protein [Escherichia coli O26:H11 str. 11368]
          Length = 158

 Score = 74.7 bits (182), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSF 152


>gi|300824031|ref|ZP_07104152.1| putative DNA repair protein RadC [Escherichia coli MS 119-7]
 gi|300523421|gb|EFK44490.1| putative DNA repair protein RadC [Escherichia coli MS 119-7]
          Length = 158

 Score = 74.7 bits (182), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSF 152


>gi|222825167|dbj|BAH22324.1| DNA repair protein RadC [Wolbachia endosymbiont of Cadra cautella]
          Length = 219

 Score = 74.7 bits (182), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD+   LI + +Q  GTID VP+Y+REI+++ L + A+SI + HNHPSG+  PS  D 
Sbjct: 123 VYLDRSGHLIYEYIQDCGTIDRVPLYVREIIKQGLLIDASSIAISHNHPSGDTEPSKEDE 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           + T  +  T   + + + DHII+ + +  SF
Sbjct: 183 DNTLTLAATCENVGMKLIDHIIVTQKSHFSF 213


>gi|91774671|ref|YP_544427.1| DNA repair protein RadC [Methylobacillus flagellatus KT]
 gi|122985645|sp|Q1H4K1|Y315_METFK RecName: Full=UPF0758 protein Mfla_0315
 gi|91708658|gb|ABE48586.1| DNA replication and repair protein RadC [Methylobacillus
           flagellatus KT]
          Length = 224

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 4/97 (4%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L  +E+ S GT+    VY RE+V+  L  +A ++I  HNHPSG P PS AD
Sbjct: 128 IFLDAQHRVLAVEELFS-GTLTQTSVYPREVVKCALRHNAAAMIFAHNHPSGVPEPSQAD 186

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
             +T+ +   LN ++I V DH ++  +  VSF  +GL
Sbjct: 187 RALTEALKAALNLIDIRVLDHFVVAGNQLVSFSERGL 223


>gi|170680679|ref|YP_001746718.1| RadC family DNA repair protein [Escherichia coli SMS-3-5]
 gi|170518397|gb|ACB16575.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5]
          Length = 158

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSF 152


>gi|187478895|ref|YP_786919.1| DNA repair protein RadC [Bordetella avium 197N]
 gi|123514372|sp|Q2KXW4|Y2405_BORA1 RecName: Full=UPF0758 protein BAV2405
 gi|115423481|emb|CAJ50015.1| DNA repair protein [Bordetella avium 197N]
          Length = 225

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 2/81 (2%)

Query: 16  SRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNI 75
            RGT+    V+ RE+V+  L L A +IIL HNHPSGNP PS AD   TQ +   L  ++I
Sbjct: 144 ERGTLGRASVFPREVVREALRLHAGAIILAHNHPSGNPQPSAADCAFTQQLSQALALVDI 203

Query: 76  IVHDHIIIGKDAFVSF--KGL 94
            + DHII+ +D  +S   +GL
Sbjct: 204 RLVDHIIVARDQALSMAERGL 224


>gi|218698082|ref|YP_002405749.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
 gi|218354814|emb|CAV01931.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
          Length = 148

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSF 142


>gi|37678993|ref|NP_933602.1| DNA repair protein [Vibrio vulnificus YJ016]
 gi|37197735|dbj|BAC93573.1| DNA repair protein [Vibrio vulnificus YJ016]
          Length = 165

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N  I  +    GTID   VY RE+V+  LE++A ++IL HNHPSG+  PS AD 
Sbjct: 70  LLLDNQNRPIEFKELFHGTIDAASVYPREVVKVVLEVNAAAVILAHNHPSGDATPSQADR 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L+ +++ V DHI+ GKD+ VSF
Sbjct: 130 RITERLKDALSLVDVRVLDHIVAGKDS-VSF 159


>gi|238785016|ref|ZP_04629013.1| DNA repair protein RadC [Yersinia bercovieri ATCC 43970]
 gi|238714057|gb|EEQ06072.1| DNA repair protein RadC [Yersinia bercovieri ATCC 43970]
          Length = 162

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   +GT++   V+ RE+V+  L  ++ +++L HNHPSG+  PS AD 
Sbjct: 64  LFLDNQNRLIAYETLFKGTVNSTEVHPREVVKAALRHNSAAVLLAHNHPSGHAEPSQADR 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  ++  L+ +++ V DH+++G    VSF
Sbjct: 124 QITDRLVNVLDLVDVRVLDHLVVGGLDIVSF 154


>gi|294625196|ref|ZP_06703838.1| DNA repair protein RadC [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600515|gb|EFF44610.1| DNA repair protein RadC [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 225

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+ D 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEPDR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++ +L  ++I + DH +IG    VSF
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSF 218


>gi|171057386|ref|YP_001789735.1| DNA repair protein RadC [Leptothrix cholodnii SP-6]
 gi|238689101|sp|B1Y0I9|Y695_LEPCP RecName: Full=UPF0758 protein Lcho_0695
 gi|170774831|gb|ACB32970.1| DNA repair protein RadC [Leptothrix cholodnii SP-6]
          Length = 222

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 61/91 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGT+    VY RE+++R L L+A ++IL HNHPSG   PS AD 
Sbjct: 126 LFLDAQHRLIAYEPLFRGTLTQTSVYPREVLKRALALNAAALILAHNHPSGVAEPSRADE 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ++ T L  +++ V DH ++G+++ VSF
Sbjct: 186 FLTQSLKTALALIDVRVLDHFVVGRESVVSF 216


>gi|210612724|ref|ZP_03289439.1| hypothetical protein CLONEX_01641 [Clostridium nexile DSM 1787]
 gi|210151417|gb|EEA82425.1| hypothetical protein CLONEX_01641 [Clostridium nexile DSM 1787]
          Length = 232

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI +   S+GT++   V  RE+    LE +A SIIL+HNHPSG+P PS  DI
Sbjct: 136 LMLNTKSKLIGETDISKGTVNASLVSPRELFIEALEKNAVSIILMHNHPSGDPTPSKNDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    N + I + DHIIIG + ++SF   R++
Sbjct: 196 LLTKRVTDAGNLIGIELLDHIIIGNNCYISFAEQRLL 232


>gi|126664654|ref|ZP_01735638.1| DNA repair protein RadC [Marinobacter sp. ELB17]
 gi|126630980|gb|EBA01594.1| DNA repair protein RadC [Marinobacter sp. ELB17]
          Length = 184

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I      RGTID   VY RE+V++ LE +A ++I  HNHPSG   PS ADI
Sbjct: 88  LFLDNRHRIIHYRELFRGTIDGAAVYPREVVRQALEDNAAAVIFAHNHPSGVAEPSQADI 147

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L  ++I V DH+++G    +S   +GL
Sbjct: 148 ALTKRLKDALALVDIRVLDHMVVGHGEVISLAERGL 183


>gi|258592223|emb|CBE68532.1| DNA repair protein radC homolog [NC10 bacterium 'Dutch sediment']
          Length = 245

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+ +N ++ +   S G++   PVY+R +V       A ++I+ HNHPSGNP PS AD 
Sbjct: 136 LLLNGNNEVLENVTASEGSLTESPVYLRNLVNLANRHQAVALIVAHNHPSGNPRPSQADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ ++     L I V DH+IIG   + SF
Sbjct: 196 SLTEELVVMGRLLKIGVLDHVIIGDGCYYSF 226


>gi|82779592|ref|YP_405941.1| putative DNA repair protein [Shigella dysenteriae Sd197]
 gi|309787459|ref|ZP_07682071.1| DNA repair RadC family protein [Shigella dysenteriae 1617]
 gi|81243740|gb|ABB64450.1| putative DNA repair protein [Shigella dysenteriae Sd197]
 gi|308925037|gb|EFP70532.1| DNA repair RadC family protein [Shigella dysenteriae 1617]
          Length = 158

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRSLYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSF 152


>gi|104784328|ref|YP_610826.1| DNA repair protein RadC [Pseudomonas entomophila L48]
 gi|122401255|sp|Q1I2U3|Y5431_PSEE4 RecName: Full=UPF0758 protein PSEEN5431
 gi|95113315|emb|CAK18043.1| DNA repair protein radC [Pseudomonas entomophila L48]
          Length = 226

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 56/84 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   +Y RE+V+R L  +A ++IL HNHPSGN  PS  D+
Sbjct: 128 LFLDTKHRPLAFEILFRGTIDRASIYPREVVRRALLHNAAALILCHNHPSGNCEPSQDDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           ++T  +  +L  +++ V DH+I+G
Sbjct: 188 HLTLMLKRSLALIDVRVVDHVIVG 211


>gi|42520476|ref|NP_966391.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58697545|ref|ZP_00372786.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58698969|ref|ZP_00373824.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58699197|ref|ZP_00374008.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630364|ref|YP_002727155.1| DNA repair protein RadC, putative [Wolbachia sp. wRi]
 gi|225630758|ref|YP_002727549.1| DNA repair protein RadC, putative [Wolbachia sp. wRi]
 gi|42410215|gb|AAS14325.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58534284|gb|EAL58472.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534509|gb|EAL58653.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58535974|gb|EAL59696.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225592345|gb|ACN95364.1| DNA repair protein RadC, putative [Wolbachia sp. wRi]
 gi|225592739|gb|ACN95758.1| DNA repair protein RadC, putative [Wolbachia sp. wRi]
          Length = 218

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 58/92 (63%), Gaps = 1/92 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   LI +E    G ++  PVYI+EI ++ L  +ATSII+ HNHP G+  PS+ D 
Sbjct: 123 LYLNKRRQLIGEE-SYIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSEEDQ 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+++    + +++ + DHIII    + SF+
Sbjct: 182 AVTKSLAAACSTVSVKLFDHIIITSGGYFSFR 213


>gi|218699408|ref|YP_002407037.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           IAI39]
 gi|218369394|emb|CAR17153.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           IAI39]
          Length = 158

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   P  AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPGKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|332171766|gb|AEE21020.1| DNA repair protein RadC [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 224

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI       GTID   VY R +V++ LE +A ++IL HNHPSG   PS AD 
Sbjct: 128 LLLDSQHQLIKFRKMFFGTIDSASVYPRVLVKQALEDNAAAVILTHNHPSGVAEPSQADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           ++T  II+ +  L+I V DH+++G    VSF  +GL
Sbjct: 188 HITARIISAMGLLDIKVLDHLVVGDGVAVSFAERGL 223


>gi|301304730|ref|ZP_07210837.1| putative DNA repair protein RadC [Escherichia coli MS 124-1]
 gi|300839961|gb|EFK67721.1| putative DNA repair protein RadC [Escherichia coli MS 124-1]
 gi|315252324|gb|EFU32292.1| putative DNA repair protein RadC [Escherichia coli MS 85-1]
          Length = 158

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGEPLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|297616876|ref|YP_003702035.1| DNA repair protein RadC [Syntrophothermus lipocalidus DSM 12680]
 gi|297144713|gb|ADI01470.1| DNA repair protein RadC [Syntrophothermus lipocalidus DSM 12680]
          Length = 229

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD+ N +I+ E  S G +    V+ RE+ +  ++ SA  IILVHNHPSG+P+PS  DI
Sbjct: 133 VYLDRKNQIISIETISIGGLASSIVHPREVFKPAVKKSAAGIILVHNHPSGDPSPSQEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I + DHIIIG   ++S +G  II
Sbjct: 193 EVTRRLVEAGRIIGIEIVDHIIIGDRDYLSMRGRGII 229


>gi|260845668|ref|YP_003223446.1| putative radC-like protein YeeS [Escherichia coli O103:H2 str.
           12009]
 gi|257760815|dbj|BAI32312.1| putative radC-like protein YeeS [Escherichia coli O103:H2 str.
           12009]
          Length = 158

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGRQVFSF 152


>gi|284800095|ref|ZP_05985708.2| DNA repair protein RadC [Neisseria subflava NJ9703]
 gi|284795938|gb|EFC51285.1| DNA repair protein RadC [Neisseria subflava NJ9703]
          Length = 230

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+IL HNHP G+  PS++D+
Sbjct: 134 LLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGGSGRPSESDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ +   L+ ++I + DH I+      S +
Sbjct: 194 QFTERLKQALSLVDITLLDHFIVTAKETCSLR 225


>gi|241764305|ref|ZP_04762334.1| DNA repair protein RadC [Acidovorax delafieldii 2AN]
 gi|241366319|gb|EER60856.1| DNA repair protein RadC [Acidovorax delafieldii 2AN]
          Length = 164

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 52/84 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINSTAVYPRVVVQRVLELKAAAVVFAHQHPSGITEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +TQ +   L  +++ V DHII+G
Sbjct: 128 ALTQQLQAALALIDVRVLDHIIVG 151


>gi|260845828|ref|YP_003223606.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
 gi|257760975|dbj|BAI32472.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
          Length = 158

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGRQVFSF 152


>gi|315645752|ref|ZP_07898876.1| DNA repair protein RadC [Paenibacillus vortex V453]
 gi|315279230|gb|EFU42540.1| DNA repair protein RadC [Paenibacillus vortex V453]
          Length = 229

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +IA E  S G+++   V+ RE+ +  ++ S+ S++  HNHPSG+P PS  DI
Sbjct: 133 VFLNTKNHVIAQETLSMGSLNASIVHPREVFRAAIKCSSASLVCAHNHPSGDPTPSPEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T  ++     + I V DH+IIG  +FVS K
Sbjct: 193 SLTTRLVEAGQIVGIEVLDHLIIGDGSFVSLK 224


>gi|289671096|ref|ZP_06492171.1| DNA repair protein RadC [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 225

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++ +L  ++I + DH +IG    VS 
Sbjct: 188 AVTKRLLESLELVDIRLLDHFVIGDGRPVSL 218


>gi|260846935|ref|YP_003224713.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
 gi|257762082|dbj|BAI33579.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
          Length = 158

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGRQVFSF 152


>gi|301021305|ref|ZP_07185334.1| putative DNA repair protein RadC [Escherichia coli MS 69-1]
 gi|300398156|gb|EFJ81694.1| putative DNA repair protein RadC [Escherichia coli MS 69-1]
          Length = 157

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+  E    GTI+   V+ REIV+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVTEPSRADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T NI+ TL+ + + V DH IIG    +SF
Sbjct: 121 LITTNIVKTLDLVKVRVLDHFIIGAGDVLSF 151


>gi|319795329|ref|YP_004156969.1| DNA repair protein radc [Variovorax paradoxus EPS]
 gi|315597792|gb|ADU38858.1| DNA repair protein RadC [Variovorax paradoxus EPS]
          Length = 225

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E   RGT+    VY REIV R L   A +++L HNHPSG+  PS AD 
Sbjct: 129 LFLDAQHRLIVLEELFRGTLTQASVYPREIVMRALHHQAAAVVLAHNHPSGSIEPSRADE 188

Query: 61  NMTQNIITTLNPLNIIVHDHIII--GKDAFVSFKGL 94
           ++TQ +   L+ +++ V DH+I+  G+   ++ KG+
Sbjct: 189 SLTQTLRAALSLVDVRVIDHVIVSPGQSFSMAEKGV 224


>gi|300905935|ref|ZP_07123664.1| putative DNA repair protein RadC [Escherichia coli MS 84-1]
 gi|300402241|gb|EFJ85779.1| putative DNA repair protein RadC [Escherichia coli MS 84-1]
          Length = 158

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGEPLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G +   SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSF 152


>gi|15836753|ref|NP_297441.1| DNA repair protein RadC [Xylella fastidiosa 9a5c]
 gi|9104937|gb|AAF82961.1|AE003868_7 DNA repair protein [Xylella fastidiosa 9a5c]
          Length = 232

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  I+ E    GTI+   V+ RE+V+R L L+A ++I+ HNHPSGN  PS AD 
Sbjct: 136 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ +++ + DH +IG  A VSF
Sbjct: 196 MITQRLKNALDLIDVRLVDHFVIGDGAPVSF 226


>gi|326391442|ref|ZP_08212978.1| DNA repair protein RadC [Thermoanaerobacter ethanolicus JW 200]
 gi|325992521|gb|EGD50977.1| DNA repair protein RadC [Thermoanaerobacter ethanolicus JW 200]
          Length = 226

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E S++SIILVHNHPSG+P PS  DI
Sbjct: 127 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSSSSIILVHNHPSGDPTPSREDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++   N L I V DH+IIG    +S K
Sbjct: 187 EVTKRLVEGGNILGIKVLDHVIIGDGRGISLK 218


>gi|289424005|ref|ZP_06425794.1| DNA repair protein RadC [Peptostreptococcus anaerobius 653-L]
 gi|289155580|gb|EFD04256.1| DNA repair protein RadC [Peptostreptococcus anaerobius 653-L]
          Length = 227

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 60/92 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I+D   S G++++  V+ RE+    ++ SA SIIL+HNHPSGNPNPS  DI
Sbjct: 131 VLLNTKNEIISDINISIGSLNYSIVHPREVFTEAIKKSANSIILMHNHPSGNPNPSLEDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N+T+ +  +   L I V DH+IIG+  + S K
Sbjct: 191 NVTKRLRESGEILGIEVLDHVIIGEGVYYSLK 222


>gi|167037861|ref|YP_001665439.1| DNA repair protein RadC [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040758|ref|YP_001663743.1| DNA repair protein RadC [Thermoanaerobacter sp. X514]
 gi|166854998|gb|ABY93407.1| DNA repair protein RadC [Thermoanaerobacter sp. X514]
 gi|166856695|gb|ABY95103.1| DNA repair protein RadC [Thermoanaerobacter pseudethanolicus ATCC
           33223]
          Length = 236

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E S++SIILVHNHPSG+P PS  DI
Sbjct: 137 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSSSSIILVHNHPSGDPTPSREDI 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++   N L I V DH+IIG    +S K
Sbjct: 197 EVTKRLVEGGNILGIKVLDHVIIGDGRGISLK 228


>gi|256750969|ref|ZP_05491852.1| DNA repair protein RadC [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914796|ref|ZP_07132112.1| DNA repair protein RadC [Thermoanaerobacter sp. X561]
 gi|307723970|ref|YP_003903721.1| DNA repair protein RadC [Thermoanaerobacter sp. X513]
 gi|320116278|ref|YP_004186437.1| DNA repair protein RadC [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|256750079|gb|EEU63100.1| DNA repair protein RadC [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889731|gb|EFK84877.1| DNA repair protein RadC [Thermoanaerobacter sp. X561]
 gi|307581031|gb|ADN54430.1| DNA repair protein RadC [Thermoanaerobacter sp. X513]
 gi|319929369|gb|ADV80054.1| DNA repair protein RadC [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 226

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E S++SIILVHNHPSG+P PS  DI
Sbjct: 127 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSSSSIILVHNHPSGDPTPSREDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++   N L I V DH+IIG    +S K
Sbjct: 187 EVTKRLVEGGNILGIKVLDHVIIGDGRGISLK 218


>gi|284008822|emb|CBA75590.1| DNA repair protein [Arsenophonus nasoniae]
          Length = 222

 Score = 74.3 bits (181), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  E   +GTI+ V V+ REI+++ ++++A SIIL HNHPSGNP PS AD 
Sbjct: 126 LFLNNQNQIICYEEMFKGTINRVEVHPREILRQAVKVNAVSIILAHNHPSGNPEPSLADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      ++I + DH +I     +SF
Sbjct: 186 VVTERIANACRLIDIKLLDHFVITHKKCLSF 216


>gi|56475704|ref|YP_157293.1| RadC family DNA repair protein [Aromatoleum aromaticum EbN1]
 gi|56311747|emb|CAI06392.1| DNA repair protein similar to radC family [Aromatoleum aromaticum
           EbN1]
          Length = 196

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LI  E   RGT+    VY REIV+R LEL A  +I  H HPSG   PS AD 
Sbjct: 100 LYLNARNHLILAEEAFRGTLTQTSVYPREIVRRALELRAAGVIFSHQHPSGACEPSLADE 159

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ + + L  + + V DH ++   + VSF  +GL
Sbjct: 160 LLTRTLTSALAMVEVRVLDHFVVAGHSTVSFAERGL 195


>gi|117919701|ref|YP_868893.1| DNA repair protein RadC [Shewanella sp. ANA-3]
 gi|117612033|gb|ABK47487.1| DNA repair protein RadC [Shewanella sp. ANA-3]
          Length = 169

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A ++I  HNHPSGN  PS AD 
Sbjct: 73  LFLDSQHRLIEYTEMFRGTIDSASVYPREVVKEALRLNAAAVIFSHNHPSGNSEPSRADE 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  +   L  +++   DH+I+     +SF  +GL
Sbjct: 133 AITNRLKEALALVDVRSLDHVIVAGSDTMSFAERGL 168


>gi|152984586|ref|YP_001351411.1| DNA repair protein RadC [Pseudomonas aeruginosa PA7]
 gi|166218788|sp|A6VEC6|Y6095_PSEA7 RecName: Full=UPF0758 protein PSPA7_6095
 gi|150959744|gb|ABR81769.1| DNA repair protein RadC [Pseudomonas aeruginosa PA7]
          Length = 224

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 54/84 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV  +G+ID   VY R++V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 128 LFLDTRHRVLAFEVLFQGSIDGASVYPRQVVKRALAHNAAALILTHNHPSGDARPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T  +   L  +++ V DH IIG
Sbjct: 188 QLTARLKEALALIDVRVLDHFIIG 211


>gi|77461760|ref|YP_351267.1| DNA repair protein RadC [Pseudomonas fluorescens Pf0-1]
 gi|123602798|sp|Q3K4M8|Y5539_PSEPF RecName: Full=UPF0758 protein Pfl01_5539
 gi|77385763|gb|ABA77276.1| DNA replication and repair protein RadC [Pseudomonas fluorescens
           Pf0-1]
          Length = 224

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 55/84 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E   RG+ID+  V+ RE+V+R L  +A ++IL HNHPSGN +PS AD 
Sbjct: 128 LFLDSKHQVLTFEALFRGSIDNTAVHPREVVKRSLANNAAAVILCHNHPSGNSDPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T+ +   L  +++ V DH I+G
Sbjct: 188 LLTKRLQKALELIDVRVLDHFIVG 211


>gi|25014079|sp|Q9PGZ8|Y148_XYLFA RecName: Full=UPF0758 protein XF_0148
          Length = 224

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  I+ E    GTI+   V+ RE+V+R L L+A ++I+ HNHPSGN  PS AD 
Sbjct: 128 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ +++ + DH +IG  A VSF
Sbjct: 188 MITQRLKNALDLIDVRLVDHFVIGDGAPVSF 218


>gi|198282668|ref|YP_002218989.1| DNA repair protein RadC [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218667466|ref|YP_002424861.1| DNA repair protein RadC [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226736615|sp|B7J4A8|Y358_ACIF2 RecName: Full=UPF0758 protein AFE_0358
 gi|238689967|sp|B5EMA3|Y528_ACIF5 RecName: Full=UPF0758 protein Lferr_0528
 gi|198247189|gb|ACH82782.1| DNA repair protein RadC [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519679|gb|ACK80265.1| DNA repair protein RadC [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 224

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 62/93 (66%), Gaps = 2/93 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD +H +L  +E+   GTID   V+IRE+++R LEL+A ++I+ HNHPSG   PS AD
Sbjct: 128 IFLDNRHRVLRFEEM-FLGTIDGATVHIREVLKRALELNAAALIVAHNHPSGVAEPSAAD 186

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +++T+ +   +  L++ + DH I+G    +S +
Sbjct: 187 LSLTRRLDQAMQLLDLRLLDHFIVGDGEPLSLR 219


>gi|319779280|ref|YP_004130193.1| DNA repair protein RadC [Taylorella equigenitalis MCE9]
 gi|317109304|gb|ADU92050.1| DNA repair protein RadC [Taylorella equigenitalis MCE9]
          Length = 227

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+    L   E+  +GTIDH P+Y REIV+  L   A  I++ HNHPSG   PS ADI
Sbjct: 129 LYLNYSFKLTHSEILIKGTIDHAPIYPREIVKSALRHHAAYIVMAHNHPSGRSEPSKADI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + + L  +N+ + DHI+  +    S   L +I
Sbjct: 189 EITKKLKSALELVNVKLIDHIVCTRVEATSMAELGLI 225


>gi|66768348|ref|YP_243110.1| putative DNA repair protein RadC [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188991850|ref|YP_001903860.1| putative RadC family DNA repair protein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|66573680|gb|AAY49090.1| putative DNA repair protein RadC [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733610|emb|CAP51815.1| putative RadC family DNA repair protein [Xanthomonas campestris pv.
           campestris]
          Length = 164

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  + ++A E   RGTI+   V+ R IVQR L L+A ++IL H HPSG   PS+AD 
Sbjct: 68  VFMDNLHQVLACEPMFRGTINSATVHARVIVQRALALNAAAVILSHQHPSGATEPSNADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  +   L  +++ V DHIIIGK    SF  +GL
Sbjct: 128 TLTHQLEAALALIDVRVLDHIIIGKGTPFSFAERGL 163


>gi|28198053|ref|NP_778367.1| DNA repair protein RadC [Xylella fastidiosa Temecula1]
 gi|32129952|sp|Q87F21|Y117_XYLFT RecName: Full=UPF0758 protein PD_0117
 gi|28056113|gb|AAO28016.1| DNA repair protein [Xylella fastidiosa Temecula1]
 gi|307579143|gb|ADN63112.1| DNA repair protein RadC [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 224

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  I+ E    GTI+   V+ RE+V+R L L+A ++I+ HNHPSGN  PS AD 
Sbjct: 128 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADQ 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ +++ + DH +IG  A VSF
Sbjct: 188 MITQRLKNALDLIDVRLVDHFVIGDGAPVSF 218


>gi|261405382|ref|YP_003241623.1| DNA repair protein RadC [Paenibacillus sp. Y412MC10]
 gi|329928472|ref|ZP_08282340.1| DNA repair protein RadC [Paenibacillus sp. HGF5]
 gi|261281845|gb|ACX63816.1| DNA repair protein RadC [Paenibacillus sp. Y412MC10]
 gi|328937731|gb|EGG34139.1| DNA repair protein RadC [Paenibacillus sp. HGF5]
          Length = 229

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +IA E  S G+++   V+ RE+ +  ++ S+ S++  HNHPSG+P PS  DI
Sbjct: 133 VFLNTKNHVIAQETLSMGSLNASIVHPREVFRAAIKCSSASLVCAHNHPSGDPTPSPEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T  ++     + I V DH+IIG  +FVS K
Sbjct: 193 SLTARLVEAGQIVGIDVLDHLIIGDGSFVSLK 224


>gi|58699615|ref|ZP_00374308.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila
          ananassae]
 gi|58533866|gb|EAL58172.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila
          ananassae]
          Length = 100

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 58/91 (63%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          ++LD+   LI + +Q  GTID VP+Y+REI+++ L + A+SI + HNHPSG+  PS  D 
Sbjct: 4  IYLDRSGHLIYEYIQDCGTIDRVPLYVREIIKQGLLIDASSIAISHNHPSGDTEPSKEDE 63

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
          + T  +  T   + + + DHII+ + +  SF
Sbjct: 64 DNTLTLAATCENVGMKLIDHIIVTQKSHFSF 94


>gi|218891377|ref|YP_002440244.1| RadC family DNA repair protein [Pseudomonas aeruginosa LESB58]
 gi|218771603|emb|CAW27376.1| RadC family DNA repair protein [Pseudomonas aeruginosa LESB58]
          Length = 164

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  + ++A E   RGTI    V+ R IVQR LEL+A ++I  H HPSG   PS AD 
Sbjct: 68  VFLNSMHEVLAYEPMFRGTIHSTSVHARPIVQRALELNAAAVIFSHQHPSGCTEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ +++ V DH+I+G+    SF
Sbjct: 128 ALTQTLRAALSLIDVRVLDHLIVGQGTPYSF 158


>gi|120599009|ref|YP_963583.1| DNA repair protein RadC [Shewanella sp. W3-18-1]
 gi|120559102|gb|ABM25029.1| DNA repair protein RadC [Shewanella sp. W3-18-1]
          Length = 160

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LIA E    GTID   VY RE+V+  L  +A + I  HNHPSG P PS AD 
Sbjct: 64  LLLDSQHRLIAYEELFFGTIDAASVYPREVVKLVLHRNAAAAIFAHNHPSGIPEPSQADK 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ + + L  +++   DH +IG    VSF
Sbjct: 124 RITERLKSALATIDVAALDHFVIGHHEVVSF 154


>gi|227535259|ref|ZP_03965308.1| DNA repair protein (RadC) [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227187143|gb|EEI67210.1| DNA repair protein (RadC) [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 229

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I +++ + GT+D      R + +  L+LSAT++I+VHNHPSG+P+PS AD 
Sbjct: 131 LFLDVKNQIITEQIAAIGTVDSAMADPRIVFREALKLSATNLIMVHNHPSGDPSPSQADR 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           + T         L + + DH+I+G + + SF
Sbjct: 191 DTTTRFQLAAALLGMHLIDHLIVGGERYYSF 221


>gi|84622119|ref|YP_449491.1| DNA repair protein RadC [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|123523355|sp|Q2P8B0|Y462_XANOM RecName: Full=UPF0758 protein XOO0462
 gi|84366059|dbj|BAE67217.1| DNA repair protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 225

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++ +L  ++I + DH +IG    VS 
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSL 218


>gi|116494746|ref|YP_806480.1| DNA repair protein [Lactobacillus casei ATCC 334]
 gi|116104896|gb|ABJ70038.1| DNA replication and repair protein RadC [Lactobacillus casei ATCC
           334]
          Length = 222

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I +++ + GT+D      R + +  L+LSAT++I+VHNHPSG+P+PS AD 
Sbjct: 124 LFLDVKNQIITEQIAAIGTVDSAMADPRIVFREALKLSATNLIMVHNHPSGDPSPSQADR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           + T         L + + DH+I+G + + SF
Sbjct: 184 DTTTRFQLAAALLGMHLIDHLIVGGERYYSF 214


>gi|78357485|ref|YP_388934.1| DNA repair protein RadC [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219890|gb|ABB39239.1| DNA repair protein RadC [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 225

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 56/91 (61%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           ++D+ N L+A E  +RGT++   +Y R++++  L   A+ +ILVHNHP G+  PS  D+ 
Sbjct: 130 YMDRQNRLLAWERATRGTVNASAIYPRDLMEAALRYKASGLILVHNHPGGSARPSAPDVE 189

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +T+ +  +   L + + DH+I+ ++   S K
Sbjct: 190 VTKLVARSAASLGMTLVDHVIVTEEGHYSLK 220


>gi|323971984|gb|EGB67205.1| DNA repair protein RadC [Escherichia coli TA007]
          Length = 158

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+V+R L  +A +++L HNHPSG   P  AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVVKRALYHNAAAVVLAHNHPSGEVTPGKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+IIG     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIIGGSRVFSF 152


>gi|191638257|ref|YP_001987423.1| DNA repair protein (RadC) [Lactobacillus casei BL23]
 gi|239631658|ref|ZP_04674689.1| DNA repair protein [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066305|ref|YP_003788328.1| DNA repair protein [Lactobacillus casei str. Zhang]
 gi|190712559|emb|CAQ66565.1| DNA repair protein (RadC) [Lactobacillus casei BL23]
 gi|239526123|gb|EEQ65124.1| DNA repair protein [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300438712|gb|ADK18478.1| DNA repair protein [Lactobacillus casei str. Zhang]
 gi|327382289|gb|AEA53765.1| DNA repair protein RadC [Lactobacillus casei LC2W]
 gi|327385484|gb|AEA56958.1| DNA repair protein RadC [Lactobacillus casei BD-II]
          Length = 222

 Score = 74.3 bits (181), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I +++ + GT+D      R + +  L+LSAT++I+VHNHPSG+P+PS AD 
Sbjct: 124 LFLDVKNQIITEQIAAIGTVDSAMADPRIVFREALKLSATNLIMVHNHPSGDPSPSQADR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           + T         L + + DH+I+G + + SF
Sbjct: 184 DTTTRFQLAAALLGMHLIDHLIVGGERYYSF 214


>gi|325918271|ref|ZP_08180413.1| DNA repair protein radc [Xanthomonas vesicatoria ATCC 35937]
 gi|325535515|gb|EGD07369.1| DNA repair protein radc [Xanthomonas vesicatoria ATCC 35937]
          Length = 159

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 2/85 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +FLD KH IL A E    GTID   V+ R + +R L+L+A ++IL HNHPSGNP PS+AD
Sbjct: 63  VFLDIKHQIL-ATEHLFFGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEAD 121

Query: 60  INMTQNIITTLNPLNIIVHDHIIIG 84
             +T+ +   L   +I + DH++IG
Sbjct: 122 RKVTERLQQALGLFDIRILDHLVIG 146


>gi|310658699|ref|YP_003936420.1| DNA repair protein RadC-like protein [Clostridium sticklandii DSM
           519]
 gi|308825477|emb|CBH21515.1| DNA repair protein radC homolog [Clostridium sticklandii]
          Length = 228

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N++I  +  S G+++   V+ RE+    ++ SA  +IL+HNHPSG+P PS  DI
Sbjct: 132 VLLNTKNVIIGSKDISEGSLNASIVHPREVFLEAIKKSANKMILMHNHPSGDPTPSSEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N+T+ +I+    + I + DH+IIG   F SFK
Sbjct: 192 NITKRLISAGQIVGIEILDHVIIGDGNFYSFK 223


>gi|71275890|ref|ZP_00652173.1| DNA repair protein RadC [Xylella fastidiosa Dixon]
 gi|71901383|ref|ZP_00683476.1| DNA repair protein RadC [Xylella fastidiosa Ann-1]
 gi|170729361|ref|YP_001774794.1| DNA repair protein RadC [Xylella fastidiosa M12]
 gi|182680681|ref|YP_001828841.1| DNA repair protein RadC [Xylella fastidiosa M23]
 gi|71163267|gb|EAO12986.1| DNA repair protein RadC [Xylella fastidiosa Dixon]
 gi|71728842|gb|EAO30980.1| DNA repair protein RadC [Xylella fastidiosa Ann-1]
 gi|167964154|gb|ACA11164.1| DNA repair protein [Xylella fastidiosa M12]
 gi|182630791|gb|ACB91567.1| DNA repair protein RadC [Xylella fastidiosa M23]
          Length = 242

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  I+ E    GTI+   V+ RE+V+R L L+A ++I+ HNHPSGN  PS AD 
Sbjct: 146 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADQ 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ +++ + DH +IG  A VSF
Sbjct: 206 MITQRLKNALDLIDVRLVDHFVIGDGAPVSF 236


>gi|304439839|ref|ZP_07399733.1| DNA repair protein RadC [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371578|gb|EFM25190.1| DNA repair protein RadC [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 245

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    LI     S+GT+D   V+ RE+ +  +E++A SII+ HNHPSG+P PS  D 
Sbjct: 148 LSLDTKKCLIKSSEISKGTLDATVVHPREVFREAIEVNAHSIIISHNHPSGDPVPSQKDR 207

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T  ++   + LNI + DHI+IG+  + SF+
Sbjct: 208 DITNILLKAGDILNIELVDHIVIGRGKYFSFR 239


>gi|315633557|ref|ZP_07888847.1| DNA repair protein RadC [Aggregatibacter segnis ATCC 33393]
 gi|315477599|gb|EFU68341.1| DNA repair protein RadC [Aggregatibacter segnis ATCC 33393]
          Length = 232

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY RE+++  L  +A +IIL HNHPSG   PS +D 
Sbjct: 136 LFLDNQHRLIKQERLFLGTINKAMVYPREVIKEALACNAAAIILAHNHPSGVAEPSFSDR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I V DH +IGK  + SF
Sbjct: 196 QITETIKQAAELVEIRVLDHFVIGKGNYFSF 226


>gi|71899272|ref|ZP_00681434.1| DNA repair protein RadC [Xylella fastidiosa Ann-1]
 gi|71731005|gb|EAO33074.1| DNA repair protein RadC [Xylella fastidiosa Ann-1]
          Length = 242

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  I+ E    GTI+   V+ RE+V+R L L+A ++I+ HNHPSGN  PS AD 
Sbjct: 146 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADQ 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L+ +++ + DH +IG  A VSF
Sbjct: 206 MITQRLKNALDLIDVRLVDHFVIGDGAPVSF 236


>gi|266623040|ref|ZP_06115975.1| DNA repair protein RadC [Clostridium hathewayi DSM 13479]
 gi|288865204|gb|EFC97502.1| DNA repair protein RadC [Clostridium hathewayi DSM 13479]
          Length = 231

 Score = 74.3 bits (181), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+   +L+ D + S+GT++   V  REI    L+  A ++I+VHNHPSG+P PS  DI
Sbjct: 135 MLLNTKGVLLKDVLVSQGTVNASVVSPREIFIEALKYHAVNLIVVHNHPSGDPAPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+   + + I + DHIIIG +++ SFK   II
Sbjct: 195 TLTRRIMEAGDLIGIRMLDHIIIGDNSYTSFKERGII 231


>gi|301061025|ref|ZP_07201822.1| DNA repair protein RadC domain protein [delta proteobacterium
           NaphS2]
 gi|300444819|gb|EFK08787.1| DNA repair protein RadC domain protein [delta proteobacterium
           NaphS2]
          Length = 169

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 1/95 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++  E    GT+    VY REI++R L L A +++LVHNHPS +  PS  D 
Sbjct: 61  IFLDIRNHILGIEKMFTGTLSSSAVYPREIIKRLLALKAGAVVLVHNHPSRHTEPSGEDR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAF-VSFKGL 94
            +T+ +   L  ++ ++HDHII+G D +  S KG+
Sbjct: 121 VLTRKVALALTAVDALLHDHIIVGDDYYSFSEKGI 155


>gi|254237987|ref|ZP_04931310.1| DNA repair protein RadC [Pseudomonas aeruginosa C3719]
 gi|126169918|gb|EAZ55429.1| DNA repair protein RadC [Pseudomonas aeruginosa C3719]
          Length = 224

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 54/84 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV  +G+ID   VY R++V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 128 LFLDTRHRVLAFEVLFQGSIDGASVYPRQVVKRTLAHNAAALILTHNHPSGDARPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T  +   L  +++ V DH IIG
Sbjct: 188 QLTARLKEALALIDVRVLDHFIIG 211


>gi|84386400|ref|ZP_00989428.1| DNA repair protein RadC-related protein [Vibrio splendidus 12B01]
 gi|84378824|gb|EAP95679.1| DNA repair protein RadC-related protein [Vibrio splendidus 12B01]
          Length = 157

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D+  SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DSCTSF 151


>gi|293393619|ref|ZP_06637929.1| DNA repair protein RadC [Serratia odorifera DSM 4582]
 gi|291423954|gb|EFE97173.1| DNA repair protein RadC [Serratia odorifera DSM 4582]
          Length = 228

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI  V V+ REIV+  L+ +A +IIL HNHPSG   PS AD 
Sbjct: 132 LFLDNQHRVIRHQEMFTGTISSVVVHPREIVREALKANAAAIILAHNHPSGKAEPSHADR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      L I V DH++IG+   VSF
Sbjct: 192 LITEQVANACQLLEIRVLDHLVIGRGECVSF 222


>gi|107104421|ref|ZP_01368339.1| hypothetical protein PaerPA_01005498 [Pseudomonas aeruginosa PACS2]
 gi|116053466|ref|YP_793793.1| DNA repair protein RadC [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894422|ref|YP_002443292.1| DNA repair protein RadC [Pseudomonas aeruginosa LESB58]
 gi|254243795|ref|ZP_04937117.1| DNA repair protein RadC [Pseudomonas aeruginosa 2192]
 gi|296392178|ref|ZP_06881653.1| DNA repair protein RadC [Pseudomonas aeruginosa PAb1]
 gi|313106745|ref|ZP_07792962.1| DNA repair protein RadC [Pseudomonas aeruginosa 39016]
 gi|122256513|sp|Q02E43|Y7023_PSEAB RecName: Full=UPF0758 protein PA14_70230
 gi|226736626|sp|B7V5L0|Y5714_PSEA8 RecName: Full=UPF0758 protein PLES_57141
 gi|115588687|gb|ABJ14702.1| DNA repair protein RadC [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126197173|gb|EAZ61236.1| DNA repair protein RadC [Pseudomonas aeruginosa 2192]
 gi|218774651|emb|CAW30468.1| DNA repair protein RadC [Pseudomonas aeruginosa LESB58]
 gi|310879464|gb|EFQ38058.1| DNA repair protein RadC [Pseudomonas aeruginosa 39016]
          Length = 224

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 54/84 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV  +G+ID   VY R++V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 128 LFLDTRHRVLAFEVLFQGSIDGASVYPRQVVKRTLAHNAAALILTHNHPSGDARPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T  +   L  +++ V DH IIG
Sbjct: 188 QLTARLKEALALIDVRVLDHFIIG 211


>gi|238764329|ref|ZP_04625280.1| DNA repair protein radC [Yersinia kristensenii ATCC 33638]
 gi|238697480|gb|EEP90246.1| DNA repair protein radC [Yersinia kristensenii ATCC 33638]
          Length = 95

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 55/89 (61%)

Query: 3  LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
          +D  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD  M
Sbjct: 1  MDNQHRVIRHEEMFTGTIGSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADRLM 60

Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
          T  +I   + L+I V DH+++G+   VSF
Sbjct: 61 TTQVIKACSLLDIRVLDHLVVGRGECVSF 89


>gi|297580642|ref|ZP_06942568.1| DNA repair protein RadC family protein [Vibrio cholerae RC385]
 gi|297535058|gb|EFH73893.1| DNA repair protein RadC family protein [Vibrio cholerae RC385]
          Length = 157

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNCLIEFKELFQGTVDAASVYPREVVKAVLEINAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DTCTSF 151


>gi|85712366|ref|ZP_01043416.1| DNA repair protein RadC [Idiomarina baltica OS145]
 gi|85693809|gb|EAQ31757.1| DNA repair protein RadC [Idiomarina baltica OS145]
          Length = 157

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 3/96 (3%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + +D  + LI  +    GTI+  PVY RE+++  L+ +A +IIL HNHPSG   PS+AD 
Sbjct: 62  MLMDSQHRLIEYKELFFGTINAAPVYPREVMKEVLQQNAAAIILAHNHPSGVTEPSEADK 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  I   LN +++ V DHI++G+D  VSF  +GL
Sbjct: 122 RVTTRIKDALNHIDVPVLDHIVVGQDT-VSFAERGL 156


>gi|148550394|ref|YP_001270496.1| DNA repair protein RadC [Pseudomonas putida F1]
 gi|148514452|gb|ABQ81312.1| DNA repair protein RadC [Pseudomonas putida F1]
          Length = 235

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 55/84 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   VY RE+V+R L  +A ++IL HNHPSG   PS  D+
Sbjct: 137 LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDV 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           ++T ++   L  +++ V DHIIIG
Sbjct: 197 HLTLSLKRGLALIDVRVLDHIIIG 220


>gi|271501414|ref|YP_003334439.1| DNA repair protein RadC [Dickeya dadantii Ech586]
 gi|270344969|gb|ACZ77734.1| DNA repair protein RadC [Dickeya dadantii Ech586]
          Length = 159

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N  +  E+   GT++H  ++ REIV+  L  +A ++IL HNHPSG   PS++D 
Sbjct: 63  LYLDNQNRFLDKEILFLGTVNHTEIHPREIVKGALRHNAAAVILAHNHPSGYTAPSESDK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I  L  L I V DH IIG    +SF
Sbjct: 123 AITRKVIQALALLEIRVLDHFIIGTHDVLSF 153


>gi|325982099|ref|YP_004294501.1| DNA repair protein RadC [Nitrosomonas sp. AL212]
 gi|325531618|gb|ADZ26339.1| DNA repair protein RadC [Nitrosomonas sp. AL212]
          Length = 224

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N  IA E    GT+    VY REI++R L  +A ++I  HNHPSG   PS AD 
Sbjct: 128 IFLDAKNHAIATEELFSGTLTQASVYPREIIKRALYHNAAAVIFAHNHPSGIAEPSHADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ++   L+ +++ V DH I+G    +SF
Sbjct: 188 VLTQSLKQALSLVDVQVLDHFIVGNGTALSF 218


>gi|172048651|sp|A5WB02|Y5194_PSEP1 RecName: Full=UPF0758 protein Pput_5194
          Length = 226

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 55/84 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   VY RE+V+R L  +A ++IL HNHPSG   PS  D+
Sbjct: 128 LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           ++T ++   L  +++ V DHIIIG
Sbjct: 188 HLTLSLKRGLALIDVRVLDHIIIG 211


>gi|24114260|ref|NP_708770.1| RADC family DNA repair protein [Shigella flexneri 2a str. 301]
 gi|30064313|ref|NP_838484.1| RADC family DNA repair protein [Shigella flexneri 2a str. 2457T]
 gi|24053414|gb|AAN44477.1| putative RADC family DNA repair protein [Shigella flexneri 2a str.
           301]
 gi|30042570|gb|AAP18294.1| putative RADC family DNA repair protein [Shigella flexneri 2a str.
           2457T]
 gi|281602347|gb|ADA75331.1| putative RADC family DNA repair protein [Shigella flexneri 2002017]
          Length = 163

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSF 157


>gi|320160805|ref|YP_004174029.1| DNA repair protein RadC [Anaerolinea thermophila UNI-1]
 gi|319994658|dbj|BAJ63429.1| DNA repair protein RadC [Anaerolinea thermophila UNI-1]
          Length = 235

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N ++  E    G+++   V + EI +  ++ SA S+ILVHNHPSG+P+PS  DI
Sbjct: 137 ILLDTRNRVLKIENLYIGSLNASTVRVAEIFRPAIQASAASLILVHNHPSGDPSPSPEDI 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +I     L+I V DH+IIG++ +VS K
Sbjct: 197 TLTRTVIQAGKMLDIGVLDHLIIGQNRWVSLK 228


>gi|308188656|ref|YP_003932787.1| DNA repair protein radC [Pantoea vagans C9-1]
 gi|308059166|gb|ADO11338.1| DNA repair protein radC [Pantoea vagans C9-1]
          Length = 218

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           LFLD +H +L A  + S G+I+ V V+ REIV+  L+L+A ++IL HNHPSG   PS AD
Sbjct: 122 LFLDNQHRVLRAQNMFS-GSINSVEVHPREIVREALKLNAAALILAHNHPSGMAEPSRAD 180

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T  +       +I + DH++IG   +VSF
Sbjct: 181 REVTHKVSEACQLFDIRLLDHLVIGHGEYVSF 212


>gi|304399017|ref|ZP_07380886.1| DNA repair protein RadC [Pantoea sp. aB]
 gi|304353477|gb|EFM17855.1| DNA repair protein RadC [Pantoea sp. aB]
          Length = 218

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           LFLD +H +L A  + S G+I+ V V+ REIV+  L+L+A ++IL HNHPSG   PS AD
Sbjct: 122 LFLDNQHRVLRAQNMFS-GSINSVEVHPREIVREALKLNAAALILAHNHPSGMAEPSRAD 180

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T  +       +I + DH++IG   +VSF
Sbjct: 181 REVTHKVSEACQLFDIRLLDHLVIGHGEYVSF 212


>gi|117620845|ref|YP_855621.1| putative DNA repair protein RadC [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562252|gb|ABK39200.1| putative DNA repair protein RadC [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 176

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A E    GT+    VY R++V++ L  +A +++LVHNHPSG P PS ADI
Sbjct: 80  LFLDNQHRVLAYEELFLGTLSAATVYPRDVVKQALHYNAAALMLVHNHPSGYPEPSRADI 139

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  +   L  ++I + DH+++G +  VS   +GL
Sbjct: 140 AITLRLQNALALVDIRILDHLVVGTEGVVSLAERGL 175


>gi|26991960|ref|NP_747385.1| DNA repair protein RadC [Pseudomonas putida KT2440]
 gi|37999603|sp|Q88C97|Y5284_PSEPK RecName: Full=UPF0758 protein PP_5284
 gi|24987089|gb|AAN70849.1|AE016729_7 DNA repair protein RadC [Pseudomonas putida KT2440]
          Length = 226

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 55/84 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   VY RE+V+R L  +A ++IL HNHPSG   PS  D+
Sbjct: 128 LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           ++T ++   L  +++ V DHIIIG
Sbjct: 188 HLTLSLKRGLALIDVRVLDHIIIG 211


>gi|226945653|ref|YP_002800726.1| DNA repair protein RadC-like protein [Azotobacter vinelandii DJ]
 gi|226720580|gb|ACO79751.1| DNA repair protein RadC-like protein [Azotobacter vinelandii DJ]
          Length = 168

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI       GTID   V+ RE+V++ L ++A ++I+ HNHPSGNP PS AD 
Sbjct: 72  LFLDTRHRLIDYVEMFHGTIDAAEVHPREVVKQALRVNAAAVIVSHNHPSGNPEPSGADR 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  +++ V DH+I+      SF  +GL
Sbjct: 132 ALTQQLKQVLALVDVRVLDHVIVAGAVATSFAERGL 167


>gi|325917528|ref|ZP_08179731.1| DNA replication and repair protein RadC [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325536244|gb|EGD08037.1| DNA replication and repair protein RadC [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 243

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 146 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L+ ++I + DH +IG    VS 
Sbjct: 206 AVTRRLLQGLDLVDIRLLDHFVIGDGRPVSL 236


>gi|289578046|ref|YP_003476673.1| DNA repair protein RadC [Thermoanaerobacter italicus Ab9]
 gi|297544317|ref|YP_003676619.1| DNA repair protein RadC [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|289527759|gb|ADD02111.1| DNA repair protein RadC [Thermoanaerobacter italicus Ab9]
 gi|296842092|gb|ADH60608.1| DNA repair protein RadC [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 226

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E S +SIILVHNHPSG+P PS  DI
Sbjct: 127 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSCSSIILVHNHPSGDPTPSREDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++   N L I V DH+IIG    +S K
Sbjct: 187 EVTKRLVEGGNILGIKVLDHVIIGDGRGISLK 218


>gi|313501259|gb|ADR62625.1| RadC [Pseudomonas putida BIRD-1]
          Length = 175

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 55/84 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   VY RE+V+R L  +A ++IL HNHPSG   PS  D+
Sbjct: 77  LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDV 136

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           ++T ++   L  +++ V DHIIIG
Sbjct: 137 HLTLSLKRGLALIDVRVLDHIIIG 160


>gi|22537259|ref|NP_688110.1| DNA repair protein RadC [Streptococcus agalactiae 2603V/R]
 gi|76788041|ref|YP_329807.1| DNA repair protein RadC [Streptococcus agalactiae A909]
 gi|77413024|ref|ZP_00789226.1| DNA repair protein RadC [Streptococcus agalactiae 515]
 gi|39931963|sp|Q8DZK0|Y1101_STRA5 RecName: Full=UPF0758 protein SAG1101
 gi|123601762|sp|Q3K0Z6|Y1186_STRA1 RecName: Full=UPF0758 protein SAK_1186
 gi|22534127|gb|AAM99982.1|AE014242_11 DNA repair protein RadC [Streptococcus agalactiae 2603V/R]
 gi|76563098|gb|ABA45682.1| DNA repair protein RadC [Streptococcus agalactiae A909]
 gi|77160922|gb|EAO72031.1| DNA repair protein RadC [Streptococcus agalactiae 515]
 gi|319745114|gb|EFV97439.1| DNA repair protein RadC [Streptococcus agalactiae ATCC 13813]
          Length = 226

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +++D  N +I       GT+       REI+    +  ATS+I++HNHPSG+P PS++D+
Sbjct: 129 IYMDTQNRIIEQRTIFIGTVRRSVAEPREILHYACKNMATSLIIIHNHPSGSPKPSESDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + T+ I  + + L I+  DHII+GK+ + SF+
Sbjct: 189 SFTKKIKRSCDHLGIVCLDHIIVGKNKYYSFR 220


>gi|313648066|gb|EFS12512.1| DNA repair RadC family protein [Shigella flexneri 2a str. 2457T]
          Length = 158

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSF 152


>gi|284924227|emb|CBG37327.1| putative plasmid-related protein [Escherichia coli 042]
          Length = 163

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSF 157


>gi|300825335|ref|ZP_07105415.1| putative DNA repair protein RadC [Escherichia coli MS 119-7]
 gi|300522198|gb|EFK43267.1| putative DNA repair protein RadC [Escherichia coli MS 119-7]
          Length = 158

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+V+R L  +A +++L HNHPSG   P  AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVVKRALYHNAAAVVLAHNHPSGEVTPGKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSRVFSF 152


>gi|218697844|ref|YP_002405511.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
 gi|12643227|gb|AAK00479.1| unknown [Shigella flexneri 2a]
 gi|218354576|emb|CAV01492.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
          Length = 148

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSF 142


>gi|330824214|ref|YP_004387517.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
 gi|321116516|dbj|BAJ72215.1| DNA repair protein RadC [Acidovorax sp. KKS102]
 gi|329309586|gb|AEB84001.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
          Length = 168

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   V+ RE+V++ L L+A ++I+ HNHPSGN  PS AD 
Sbjct: 72  LFLDTRHRLIDYVEMFRGTIDAAEVHPREVVKQALRLNAAAVIVSHNHPSGNSEPSAADK 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            MT  +   L  ++I   DH+I+      SF  +GL
Sbjct: 132 AMTSQLRQALALVDIRTLDHVIVAGTRTTSFAERGL 167


>gi|289666330|ref|ZP_06487911.1| DNA repair protein RadC [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 213

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 56/84 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T+ ++ +L  ++I + DH +IG
Sbjct: 188 AVTKRLLESLELVDIRLLDHFVIG 211


>gi|262392610|ref|YP_003284464.1| DNA repair protein RadC [Vibrio sp. Ex25]
 gi|262336204|gb|ACY49999.1| DNA repair protein RadC [Vibrio sp. Ex25]
          Length = 158

 Score = 73.9 bits (180), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 3/96 (3%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + LI+ E    GTID   +Y RE+++  L  +A ++I  HNHPSG   PS AD 
Sbjct: 63  MFLDNQHQLISFEELFFGTIDAASIYPREVLKTALNHNAAAVIFAHNHPSGIAEPSQADK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +I  L  ++I V DHI++G +  VSF  KGL
Sbjct: 123 RITQRLIDALKLVDIRVLDHIVVG-EGCVSFAEKGL 157


>gi|153811312|ref|ZP_01963980.1| hypothetical protein RUMOBE_01704 [Ruminococcus obeum ATCC 29174]
 gi|149832439|gb|EDM87523.1| hypothetical protein RUMOBE_01704 [Ruminococcus obeum ATCC 29174]
          Length = 236

 Score = 73.9 bits (180), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+ D + S+GT++   +  RE+    L   A ++IL+HNHP GNP PS  D 
Sbjct: 135 MMLDNQNHLLGDTMLSKGTVNATLITPREVYLEALRYHAVNLILIHNHPGGNPAPSKCDK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ I      L I + DHIIIG   ++SF+
Sbjct: 195 EITERICQAGEMLGINLLDHIIIGDHRYISFR 226


>gi|83643895|ref|YP_432330.1| DNA repair protein [Hahella chejuensis KCTC 2396]
 gi|123534642|sp|Q2SN69|Y1020_HAHCH RecName: Full=UPF0758 protein HCH_01020
 gi|83631938|gb|ABC27905.1| DNA repair protein [Hahella chejuensis KCTC 2396]
          Length = 224

 Score = 73.9 bits (180), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E   RGTID   V+ RE+V+R L+ +A +II  HNHPSG   PS +D 
Sbjct: 128 LFLDNQHRVIAYEELFRGTIDSASVHPREVVRRVLKHNAAAIIFAHNHPSGVAEPSLSDK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DH+I+G    VS 
Sbjct: 188 EITETLRKALRLVDVRVLDHMIVGDGEVVSL 218


>gi|320184366|gb|EFW59178.1| putative DNA repair protein [Shigella flexneri CDC 796-83]
          Length = 158

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSF 152


>gi|218696658|ref|YP_002404325.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
 gi|218353390|emb|CAU99429.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
          Length = 148

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSF 142


>gi|251771587|gb|EES52163.1| DNA repair protein RadC [Leptospirillum ferrodiazotrophum]
          Length = 232

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + L   E  S GT+   PV+ RE     +  SA+++I VHNHPSG+P PS  D 
Sbjct: 133 LLLDTRHRLRRMEKISEGTLAMTPVHPREAFSPAVRESASAVIFVHNHPSGDPEPSPEDW 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T  ++     L I V DHI+IG  A+VS +
Sbjct: 193 SLTTRLVECGTLLGIRVLDHIVIGDHAYVSLR 224


>gi|307129553|ref|YP_003881569.1| DNA repair protein RadC [Dickeya dadantii 3937]
 gi|306527082|gb|ADM97012.1| DNA repair protein RadC [Dickeya dadantii 3937]
          Length = 203

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL   + LI       GT+    VY REIV++ L  +A ++IL HNHPSGN  PS AD+
Sbjct: 107 LFLTTRHRLIEYAELFYGTLATTAVYPREIVRKALSCNAAAVILAHNHPSGNTEPSQADL 166

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHII+G +  +SF
Sbjct: 167 MLTRRVSAALALVDVRVLDHIIVGGNDTLSF 197


>gi|270265228|ref|ZP_06193490.1| DNA repair protein RadC [Serratia odorifera 4Rx13]
 gi|270040862|gb|EFA13964.1| DNA repair protein RadC [Serratia odorifera 4Rx13]
          Length = 228

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI  V V+ REIV+  L+ +A +IIL HNHPSG   PS AD 
Sbjct: 132 LFLDNQHRVIRHQEMFAGTISSVVVHPREIVREALKANAAAIILAHNHPSGKAEPSHADR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T++++     L I V DH++IG+   VSF
Sbjct: 192 LITEHVVNACLLLEIRVLDHLVIGRGECVSF 222


>gi|251780848|ref|ZP_04823768.1| DNA repair protein RadC [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243085163|gb|EES51053.1| DNA repair protein RadC [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 229

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  NI+I  +   +G+++   V+ REI +  +  S+  II+ HNHPSG+P PS  DI
Sbjct: 133 IFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSAKIIICHNHPSGDPTPSKEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N+T  I      + I + DHIIIGK+ F+S K
Sbjct: 193 NITLRIKECGEIMGIQLLDHIIIGKNGFISLK 224


>gi|220935036|ref|YP_002513935.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996346|gb|ACL72948.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7]
          Length = 168

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI       GTID   V+ RE+V++ L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 72  LFLDTRHRLIDYVEMFHGTIDAAEVHPREVVKQALRLNAAAVIVSHNHPSGNPEPSAADR 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           +MT  +   L  +++   DH+I+      SF  +GL
Sbjct: 132 SMTAQLRQALALVDVRTLDHVIVAGTRTTSFAERGL 167


>gi|166713831|ref|ZP_02245038.1| DNA repair protein RadC [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 225

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFMDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++ +L  ++I + DH +IG    VS 
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSL 218


>gi|152994658|ref|YP_001339493.1| DNA repair protein RadC [Marinomonas sp. MWYL1]
 gi|189029397|sp|A6VSX9|Y624_MARMS RecName: Full=UPF0758 protein Mmwyl1_0624
 gi|150835582|gb|ABR69558.1| DNA repair protein RadC [Marinomonas sp. MWYL1]
          Length = 224

 Score = 73.6 bits (179), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 53/84 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +    GTID   VY RE+V+  L+ +A ++IL HNHPSG   PS ADI
Sbjct: 128 LFLDTQHRLIRYQELFMGTIDAAAVYPREVVKAALQYNAAAVILAHNHPSGIAEPSQADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           ++T  I   L+ +++ + DH ++G
Sbjct: 188 SITDKIKRALDLVDVRLLDHFVVG 211


>gi|157156526|ref|YP_001464352.1| RadC family DNA repair protein [Escherichia coli E24377A]
 gi|157078556|gb|ABV18264.1| DNA repair protein, RadC family [Escherichia coli E24377A]
          Length = 158

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVIPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+IIG     SF
Sbjct: 122 LITERLVQALALVDIRVPDHLIIGGSQVFSF 152


>gi|149908601|ref|ZP_01897263.1| DNA repair protein RadC [Moritella sp. PE36]
 gi|149808435|gb|EDM68372.1| DNA repair protein RadC [Moritella sp. PE36]
          Length = 224

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           LFLD KH ++  +E+   GTID   VY R +V++ LE +A+++I  HNHPSG   PS AD
Sbjct: 128 LFLDNKHRVIRFEEL-FYGTIDSASVYPRVVVKKALERNASAVIFAHNHPSGIAEPSHAD 186

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T  +I+ L  +++ V DH +IG     SF
Sbjct: 187 RMITDKLISALQLIDVKVLDHFVIGDSEIASF 218


>gi|90415484|ref|ZP_01223418.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2207]
 gi|90332807|gb|EAS47977.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2207]
          Length = 217

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI      +GT+D   V+ RE+V R L  +A ++I+ HNHPSG   PS ADI
Sbjct: 121 LLLDSKHQLIDTHELFQGTVDAASVHPREVVARALRKNAAAVIVAHNHPSGLAEPSQADI 180

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ +   LN + I + DH+IIG+   VS 
Sbjct: 181 DITRRLKQALNLVEIRLLDHLIIGRGEVVSL 211


>gi|325577760|ref|ZP_08148035.1| DNA repair protein RadC [Haemophilus parainfluenzae ATCC 33392]
 gi|325160505|gb|EGC72631.1| DNA repair protein RadC [Haemophilus parainfluenzae ATCC 33392]
          Length = 221

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVTNVYPREIIKESLSCNAAALILAHNHPSGLAEPSYSDK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ II     ++I + DH I+GK    SF
Sbjct: 185 MITQKIIEAAELMDIRILDHFIVGKGTCYSF 215


>gi|152998927|ref|YP_001364608.1| DNA repair protein RadC [Shewanella baltica OS185]
 gi|166218794|sp|A6WIA6|Y376_SHEB8 RecName: Full=UPF0758 protein Shew185_0376
 gi|151363545|gb|ABS06545.1| DNA repair protein RadC [Shewanella baltica OS185]
          Length = 225

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSGN  PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGNAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH+++G    VSF
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSF 218


>gi|114330795|ref|YP_747017.1| DNA repair protein RadC [Nitrosomonas eutropha C91]
 gi|122314267|sp|Q0AHY0|Y782_NITEC RecName: Full=UPF0758 protein Neut_0782
 gi|114307809|gb|ABI59052.1| DNA replication and repair protein RadC [Nitrosomonas eutropha C91]
          Length = 224

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  +  I  E   RGT+    VY RE+V+R L  +A ++I  HNHPSG   PS AD 
Sbjct: 128 IFLDARHRTIMIEELFRGTLTQASVYPREVVKRALYHNAAAMIFAHNHPSGVAEPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ++   L  +++ V DH +IG +  VSF  +GL
Sbjct: 188 MLTQSLKQALALVDVKVLDHFVIGNNETVSFAERGL 223


>gi|312865347|ref|ZP_07725575.1| DNA repair protein RadC [Streptococcus downei F0415]
 gi|311099458|gb|EFQ57674.1| DNA repair protein RadC [Streptococcus downei F0415]
          Length = 231

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 51/92 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI  +    G++       REI+       ATS+I+VHNHPSG P+PS  DI
Sbjct: 129 LYLDTQNRLIKQQTIFIGSVQRSIAEPREILHYACRFMATSVIVVHNHPSGQPDPSRYDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ I    + L +   DHII+G D + SF+
Sbjct: 189 AFTEKIKRCCDDLGLAFLDHIIVGSDNYYSFR 220


>gi|167569090|ref|ZP_02361964.1| DNA repair protein RadC [Burkholderia oklahomensis C6786]
          Length = 221

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 125 LFLDARHRLLRTEETAHGSLTRMAVYPREIVRRALSLNAAALIVAHNHPSGAVRPSAADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH ++G +   SF
Sbjct: 185 RLTRVLRDALALIDVRLMDHFVVGANDTFSF 215


>gi|148266148|ref|YP_001232854.1| DNA repair protein RadC [Geobacter uraniireducens Rf4]
 gi|189029395|sp|A5G913|Y4138_GEOUR RecName: Full=UPF0758 protein Gura_4138
 gi|146399648|gb|ABQ28281.1| DNA replication and repair protein RadC [Geobacter uraniireducens
           Rf4]
          Length = 228

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++     S G+++   V+ RE+  + +  SA +IILVHNHP+G+P PS  DI
Sbjct: 132 LLLDGKNRILKRVQISEGSLNQSIVHPREVFNQAVRESAAAIILVHNHPTGDPTPSREDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ +    + L I V DHIIIG  +F+SF
Sbjct: 192 DITRRLREAGDLLGIKVLDHIIIGDGSFLSF 222


>gi|153833510|ref|ZP_01986177.1| DNA repair protein [Vibrio harveyi HY01]
 gi|148870161|gb|EDL69102.1| DNA repair protein [Vibrio harveyi HY01]
          Length = 157

 Score = 73.6 bits (179), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DTCTSF 151


>gi|58580118|ref|YP_199134.1| DNA repair protein RadC [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58424712|gb|AAW73749.1| DNA repair protein [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 243

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS AD 
Sbjct: 146 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSKADR 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++ +L  ++I + DH +IG    VS 
Sbjct: 206 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSL 236


>gi|21243016|ref|NP_642598.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108524|gb|AAM37134.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 164

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +IA E  + GTI+   V+ R +V+R +EL+A ++IL HNHPSG    S AD 
Sbjct: 68  VFLDNKHRVIAFEALALGTINQAIVHPRVVVRRAMELNAAAVILAHNHPSGETQDSTADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ + + L+ ++I V DH+I+GK    SF
Sbjct: 128 MLTERLRSALDFVDIRVLDHVIVGKGTPYSF 158


>gi|188578899|ref|YP_001915828.1| DNA repair protein RadC [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|172044625|sp|Q5H5M1|Y495_XANOR RecName: Full=UPF0758 protein XOO0495
 gi|238689548|sp|B2SS21|Y2919_XANOP RecName: Full=UPF0758 protein PXO_02919
 gi|188523351|gb|ACD61296.1| DNA repair protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 225

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSKADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++ +L  ++I + DH +IG    VS 
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSL 218


>gi|302878190|ref|YP_003846754.1| DNA repair protein RadC [Gallionella capsiferriformans ES-2]
 gi|302580979|gb|ADL54990.1| DNA repair protein RadC [Gallionella capsiferriformans ES-2]
          Length = 205

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E    GT+    VY RE+V+R L  +A +++L HNHPSG   PS AD 
Sbjct: 109 LFLDTQHRLIAAEELFHGTLTQTSVYPREVVKRALMHNAAAVLLAHNHPSGLAEPSQADQ 168

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  +   L  +++   DH IIG ++ +SF  +GL
Sbjct: 169 LLTNALKQALALVDVRALDHFIIGDESALSFAERGL 204


>gi|227538101|ref|ZP_03968150.1| DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242177|gb|EEI92192.1| DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33300]
          Length = 229

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ +++++ ++  RG  D  PV +R I++  L   A+S+ILVHNHPSG+  PS+ D+
Sbjct: 132 LYLNRASVILSQQLIGRGGNDFTPVDVRIILKHALNCQASSMILVHNHPSGSLKPSNQDL 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ I+     ++I V DH+I     + SF+
Sbjct: 192 QLTKKIVDASKIMDIRVMDHVIFTNSKYFSFQ 223


>gi|298530828|ref|ZP_07018230.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510202|gb|EFI34106.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1]
          Length = 160

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 52/92 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D  N +I  +V ++GT+D +PV+ REI++  +   A+ IIL HNHP G   PS  D 
Sbjct: 64  LFVDNKNRMICKKVVAKGTVDQIPVFPREIIRHAILKQASGIILGHNHPGGASEPSKQDR 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T  I      L I V DHIII      SF+
Sbjct: 124 ELTSKIKRIAMELGIRVLDHIIICDSGHFSFQ 155


>gi|187933370|ref|YP_001884766.1| DNA repair protein RadC [Clostridium botulinum B str. Eklund 17B]
 gi|238691627|sp|B2TK55|Y562_CLOBB RecName: Full=UPF0758 protein CLL_A0562
 gi|187721523|gb|ACD22744.1| DNA repair protein RadC [Clostridium botulinum B str. Eklund 17B]
          Length = 229

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  NI+I  +   +G+++   V+ REI +  +  S+  II+ HNHPSG+P PS  DI
Sbjct: 133 IFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSAKIIISHNHPSGDPTPSKEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N+T  I      + I + DHIIIGK+ F+S K
Sbjct: 193 NITLRIKECGEIMGIQLLDHIIIGKNGFISLK 224


>gi|260767607|ref|ZP_05876543.1| DNA repair protein RadC [Vibrio furnissii CIP 102972]
 gi|260617507|gb|EEX42690.1| DNA repair protein RadC [Vibrio furnissii CIP 102972]
          Length = 157

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DTCTSF 151


>gi|295695338|ref|YP_003588576.1| DNA repair protein RadC [Bacillus tusciae DSM 2912]
 gi|295410940|gb|ADG05432.1| DNA repair protein RadC [Bacillus tusciae DSM 2912]
          Length = 228

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 61/92 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + ++ +EV S GT++   V+ RE+ +  ++ +A +++ VHNHPSG+P PS  DI
Sbjct: 132 LHLDTKHRVLGEEVVSVGTLNASLVHPREVFRTAIKRNAAAVVCVHNHPSGDPTPSPEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ I+ +   L I + DH++IG+  +VS +
Sbjct: 192 DVTKRIVESGRILGIDLVDHVVIGRGTYVSMR 223


>gi|258623772|ref|ZP_05718729.1| RadC-like protein [Vibrio mimicus VM603]
 gi|258583895|gb|EEW08687.1| RadC-like protein [Vibrio mimicus VM603]
          Length = 157

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DTCTSF 151


>gi|86146760|ref|ZP_01065080.1| DNA repair protein [Vibrio sp. MED222]
 gi|85835410|gb|EAQ53548.1| DNA repair protein [Vibrio sp. MED222]
          Length = 156

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 53/85 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + LI  E   +GTID   VY RE+V+  L+ +A ++I  HNHPSG+P PS AD 
Sbjct: 61  MLLDNQHRLIEFEELFQGTIDAASVYPREVVKTALKANAAAVIFAHNHPSGDPEPSQADK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK 85
            +T  +   L  +++ V DHI++G+
Sbjct: 121 RITTRLQDALALIDVRVLDHIVVGE 145


>gi|239996967|ref|ZP_04717491.1| DNA repair protein RadC [Alteromonas macleodii ATCC 27126]
          Length = 225

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LIA      GTI+   VY RE++++ +  +A +IILVHNHPSG   PS ADI
Sbjct: 128 LMLDSQHQLIAFRTMFNGTINSAAVYPRELIKQVMIDNAAAIILVHNHPSGVAEPSHADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I + +  +++ V DH ++G    VSF
Sbjct: 188 RLTAEIKSAMASIDVPVLDHFVVGDKETVSF 218


>gi|297581793|ref|ZP_06943714.1| DNA repair protein RadC family protein [Vibrio cholerae RC385]
 gi|297533887|gb|EFH72727.1| DNA repair protein RadC family protein [Vibrio cholerae RC385]
          Length = 157

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEINAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DTCTSF 151


>gi|262191975|ref|ZP_06050141.1| DNA repair protein RadC [Vibrio cholerae CT 5369-93]
 gi|262032150|gb|EEY50722.1| DNA repair protein RadC [Vibrio cholerae CT 5369-93]
 gi|315178489|gb|ADT85403.1| DNA repair protein RadC-related protein [Vibrio furnissii NCTC
           11218]
          Length = 157

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DTCTSF 151


>gi|258514688|ref|YP_003190910.1| DNA repair protein RadC [Desulfotomaculum acetoxidans DSM 771]
 gi|257778393|gb|ACV62287.1| DNA repair protein RadC [Desulfotomaculum acetoxidans DSM 771]
          Length = 227

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I+ E  S GT++   V+ RE+ +  ++ SA +IIL+HNHPSG+P PS  DI
Sbjct: 131 LLLNTKNRVISLEAISVGTLNSSNVHPRELFKVAIKRSAAAIILIHNHPSGDPTPSREDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ +      + I V DHI+IG   FVS K
Sbjct: 191 DVTERLGEAGKIVGIDVLDHIVIGDGKFVSLK 222


>gi|67459702|ref|YP_247326.1| DNA repair protein RadC [Rickettsia felis URRWXCal2]
 gi|67005235|gb|AAY62161.1| DNA repair protein RadC [Rickettsia felis URRWXCal2]
          Length = 155

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/54 (66%), Positives = 42/54 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPN 54
           LFL+K NILIADEV S+GTID   VY REI++R L   A+S+ILVHNHPSG  N
Sbjct: 95  LFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASSLILVHNHPSGALN 148


>gi|258626046|ref|ZP_05720901.1| Putative radC-like protein [Vibrio mimicus VM603]
 gi|258581666|gb|EEW06560.1| Putative radC-like protein [Vibrio mimicus VM603]
          Length = 157

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DTCTSF 151


>gi|209883200|ref|YP_002287057.1| hypothetical protein OCAR_4040 [Oligotropha carboxidovorans OM5]
 gi|209871396|gb|ACI91192.1| conserved domain protein [Oligotropha carboxidovorans OM5]
          Length = 65

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 3/64 (4%)

Query: 34 CLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
          C  +++    L+HNHPSG+P PS ADI MT++I+    PL I VHDHII+GK+   S KG
Sbjct: 5  CFSMASK---LMHNHPSGDPTPSQADIQMTKSIVAISAPLGISVHDHIIVGKNGHSSLKG 61

Query: 94 LRII 97
          +R++
Sbjct: 62 MRLM 65


>gi|78047921|ref|YP_364096.1| RadC family DNA repair protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78036351|emb|CAJ24042.1| RadC family DNA repair protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 164

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  + ++A E   +GTI    V+ R I+QR LEL+A ++I  H HPSG   PS AD 
Sbjct: 68  VFLNNKHEVLAYEPMFKGTIHSATVHARPIMQRALELNAAAVIFSHQHPSGCTEPSSADC 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ + T L  +++ V DH+I+G+    SF
Sbjct: 128 AITQTLKTALALIDVRVLDHLIVGQGTPYSF 158


>gi|328471743|gb|EGF42620.1| DNA repair protein [Vibrio parahaemolyticus 10329]
          Length = 157

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTLDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DTCTSF 151


>gi|258405551|ref|YP_003198293.1| DNA repair protein RadC [Desulfohalobium retbaense DSM 5692]
 gi|257797778|gb|ACV68715.1| DNA repair protein RadC [Desulfohalobium retbaense DSM 5692]
          Length = 228

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 48/75 (64%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GT+D   VY RE+++  L   A+ +ILVHNHP G+P PS  D ++T  +++    L   +
Sbjct: 149 GTVDQTAVYPREVLRLALTKQASGLILVHNHPGGDPTPSPQDKDLTNRLLSASRELGFRI 208

Query: 78  HDHIIIGKDAFVSFK 92
            DH+I+ ++AF SF+
Sbjct: 209 LDHVIVCEEAFFSFQ 223


>gi|312898568|ref|ZP_07757958.1| putative DNA repair protein RadC [Megasphaera micronuciformis
           F0359]
 gi|310620487|gb|EFQ04057.1| putative DNA repair protein RadC [Megasphaera micronuciformis
           F0359]
          Length = 229

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L++   N LIA    + GT++      R++ +  LE +A ++IL+HNHPSG+P PS  DI
Sbjct: 133 LYVSSKNKLIALRELTSGTLNESLAKARDVFRYALEYNAAAVILIHNHPSGDPTPSKEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             TQ I      + I V DHIIIG   +VS 
Sbjct: 193 KATQCIAEAGRVMGIPVLDHIIIGDGTYVSL 223


>gi|307825840|ref|ZP_07656056.1| DNA repair protein RadC [Methylobacter tundripaludum SV96]
 gi|307733148|gb|EFO04009.1| DNA repair protein RadC [Methylobacter tundripaludum SV96]
          Length = 224

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           LFLD +H ++  DE+  RGTID   VY RE+ ++ L  +A ++I  HNHPSG   PS AD
Sbjct: 128 LFLDNQHRVIQLDEL-FRGTIDGASVYPREVAKQALRHNAAAVIFAHNHPSGISEPSQAD 186

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            ++T+ +   L   +I V DH IIG     SF
Sbjct: 187 KHITEKLKQALALFDIRVLDHFIIGDGQPYSF 218


>gi|303241148|ref|ZP_07327656.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2]
 gi|302591275|gb|EFL61015.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2]
          Length = 226

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 51/89 (57%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +   E+   GTI+  PVY R +V+  +   A S+IL HNHP G+ NPS ADI  
Sbjct: 127 LDSQNKVNYSELVHEGTINEAPVYPRLLVEAAIRHKANSVILAHNHPGGSLNPSRADIEA 186

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           T+ I   L  ++I V DHII+    + SF
Sbjct: 187 TRTICNALESISIKVIDHIIVCGGKYYSF 215


>gi|291087662|ref|ZP_06347068.2| DNA repair protein RadC [Clostridium sp. M62/1]
 gi|291074382|gb|EFE11746.1| DNA repair protein RadC [Clostridium sp. M62/1]
          Length = 252

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +  +  N+LI +    RGT++      REI    L   A  + LVHNHPSG+P+PS  DI
Sbjct: 156 MMFNTKNMLIRESCLFRGTVNASVASAREIFIEALRYHAVRLALVHNHPSGDPSPSGEDI 215

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L + + DH+IIG +++ SFK   II
Sbjct: 216 RLTRQVAQAGELLGVTLLDHVIIGDNSYFSFKERGII 252


>gi|254479635|ref|ZP_05092939.1| DNA repair protein RadC [Carboxydibrachium pacificum DSM 12653]
 gi|214034431|gb|EEB75201.1| DNA repair protein RadC [Carboxydibrachium pacificum DSM 12653]
          Length = 208

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 54/83 (65%)

Query: 10  IADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITT 69
           IA E  S G+++   V+ RE+ +  +E SA+SIILVHNHPSG+P PS  D+ +T+ ++  
Sbjct: 118 IAIETISIGSLNTSIVHPREVFKAAIERSASSIILVHNHPSGDPTPSREDVEVTKRLVEA 177

Query: 70  LNPLNIIVHDHIIIGKDAFVSFK 92
            N L I V DH+IIG    +S K
Sbjct: 178 GNILGIKVLDHVIIGDGRGISLK 200


>gi|160892638|ref|ZP_02073428.1| hypothetical protein CLOL250_00168 [Clostridium sp. L2-50]
 gi|156865679|gb|EDO59110.1| hypothetical protein CLOL250_00168 [Clostridium sp. L2-50]
          Length = 232

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  D  + L+ +   S GT+DH  V  R+I    L+  A  I+L+HNHPSGNP PS+ DI
Sbjct: 135 LMFDSSHHLLKECRLSEGTVDHAVVSPRDIFIDALKYQAVYIVLLHNHPSGNPEPSNPDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I + DHII+G + FVS     II
Sbjct: 195 LLTKRVEEAGKTLGIRLSDHIILGNNCFVSLAERGII 231


>gi|116050520|ref|YP_790661.1| RadC-like protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115585741|gb|ABJ11756.1| RadC-like protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 168

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI       GTID   V+ RE+V++ L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 72  LFLDTRHRLIDYVEMFHGTIDAAEVHPREVVKQALRLNAAAVIVSHNHPSGNPEPSAADR 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            MT  +   L  +++   DHII+      SF
Sbjct: 132 AMTAQLRQALALVDVRTLDHIIVAGTRTTSF 162


>gi|290474866|ref|YP_003467746.1| putative CP4-57 prophage; DNA repair protein [Xenorhabdus bovienii
           SS-2004]
 gi|289174179|emb|CBJ80966.1| putative CP4-57 prophage; DNA repair protein [Xenorhabdus bovienii
           SS-2004]
          Length = 156

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 54/86 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    GT+ H  V+ RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQHRLLERETLFTGTLSHTEVHPREVVKAALRHNAAAVILAHNHPSGEMEPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKD 86
           ++T+ +++ L  + + V DH+++G D
Sbjct: 121 HITKRVVSALALVEVRVLDHLVVGDD 146


>gi|82776320|ref|YP_402669.1| putative radC-like protein yeeS [Shigella dysenteriae Sd197]
 gi|309786791|ref|ZP_07681411.1| DNA repair RadC family protein [Shigella dysenteriae 1617]
 gi|81240468|gb|ABB61178.1| Putative radC-like protein yeeS [Shigella dysenteriae Sd197]
 gi|308925484|gb|EFP70971.1| DNA repair RadC family protein [Shigella dysenteriae 1617]
          Length = 150

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 54  LYLNNQNQLIAGEPLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVIPSKADR 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 114 LITERLVQALGLVDIRVPDHLIVGSSQVFSF 144


>gi|312143465|ref|YP_003994911.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus']
 gi|311904116|gb|ADQ14557.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus']
          Length = 231

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +IA    S+G +    V+ RE+ +  +  S+ ++ILVHNHPSG+P PS  D+
Sbjct: 135 ILLDVKNRVIAIPEISKGGLSSSIVHPREVFKEAIRRSSAAVILVHNHPSGDPKPSADDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N+T+ +      + I V DHIII  D F+SFK
Sbjct: 195 NITKKLQKAGEIIGIKVIDHIIIAGDKFLSFK 226


>gi|323703616|ref|ZP_08115260.1| DNA repair protein RadC [Desulfotomaculum nigrificans DSM 574]
 gi|323531449|gb|EGB21344.1| DNA repair protein RadC [Desulfotomaculum nigrificans DSM 574]
          Length = 227

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +++ E  S GT++   V+ RE+ +  +  SA +IIL HNHPSG+P PS  DI
Sbjct: 131 LLLNTKNRVLSKETISIGTLNSSMVHPRELFKIAIRRSAAAIILAHNHPSGDPTPSREDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +I     + I V DHIIIG + F S K
Sbjct: 191 MLTKRLIEVGQIIGIDVLDHIIIGDNRFTSLK 222


>gi|307266691|ref|ZP_07548219.1| DNA repair protein RadC [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918293|gb|EFN48539.1| DNA repair protein RadC [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 226

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E S++SIILVHNHPSG+P PS  DI
Sbjct: 127 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSSSSIILVHNHPSGDPTPSREDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++   + L I V DH+IIG    +S K
Sbjct: 187 EVTKRLVEGGDILGIKVLDHVIIGDGRGISLK 218


>gi|296157078|ref|ZP_06839914.1| DNA repair protein RadC [Burkholderia sp. Ch1-1]
 gi|295892414|gb|EFG72196.1| DNA repair protein RadC [Burkholderia sp. Ch1-1]
          Length = 164

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  + +IA E    GTID   VY R +VQR L  +A ++IL H HPSG   PS AD 
Sbjct: 68  IFMDSQHQVIAYEPLFHGTIDAAVVYPRVLVQRALAHNAAALILAHQHPSGVAKPSAADK 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T++I   L  +++ V DHII+GK    SF
Sbjct: 128 AITRDIKAALAMVDVRVLDHIIVGKGTPYSF 158


>gi|266619862|ref|ZP_06112797.1| DNA repair protein RadC [Clostridium hathewayi DSM 13479]
 gi|288868571|gb|EFD00870.1| DNA repair protein RadC [Clostridium hathewayi DSM 13479]
          Length = 215

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 52/90 (57%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD    +I+ E  + GT+D  P + RE+++R L+L A  ++L HNHP  +   S+ DI 
Sbjct: 95  YLDSGCGVISCEKVAEGTVDRSPFFTRELLKRVLQLDAVGVVLAHNHPGNSLKASEQDIA 154

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           +T  +   L  L I V DHII+G D  VS 
Sbjct: 155 ITNQLRDALGALAIKVFDHIIVGADRAVSL 184


>gi|289209451|ref|YP_003461517.1| DNA repair protein RadC [Thioalkalivibrio sp. K90mix]
 gi|288945082|gb|ADC72781.1| DNA repair protein RadC [Thioalkalivibrio sp. K90mix]
          Length = 242

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 54/84 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E   RGTID   V+ RE+V+R L  +A ++IL HNHPSG   PS +DI
Sbjct: 147 LFLDNRHRVIAFEELFRGTIDGAAVHPREVVRRVLHHNAAAVILAHNHPSGVAEPSGSDI 206

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T+ +   L  +++ + DH++I 
Sbjct: 207 AITRRLTEALGLVDVRILDHVVIA 230


>gi|46579604|ref|YP_010412.1| DNA repair protein RadC [Desulfovibrio vulgaris str. Hildenborough]
 gi|120602908|ref|YP_967308.1| DNA repair protein RadC [Desulfovibrio vulgaris DP4]
 gi|46449019|gb|AAS95671.1| DNA repair protein RadC [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563137|gb|ABM28881.1| DNA repair protein RadC [Desulfovibrio vulgaris DP4]
 gi|311233408|gb|ADP86262.1| DNA repair protein RadC [Desulfovibrio vulgaris RCH1]
          Length = 225

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 54/91 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD  N LIA E  ++GT++   +Y R++++  L  SA+ IILVHNHP GNP PS  D  
Sbjct: 130 LLDNQNRLIAWERATKGTVNASVIYPRDVLEMALRCSASGIILVHNHPGGNPVPSQPDFE 189

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +T+ +  +   L I + DH+I+  +   S K
Sbjct: 190 VTRQLSRSALTLGIRLLDHVIVTDEDCYSLK 220


>gi|317493712|ref|ZP_07952129.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918039|gb|EFV39381.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 159

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N L+A E    G+I    V+ RE+V+R L  +A ++IL HNHPSG+  PS +D 
Sbjct: 63  LYLNHQNQLLAWETLFTGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDIAPSQSDK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +I  L  +++ V DH I+G     SF
Sbjct: 123 VITQRLIQALGLVDVRVLDHFIVGGRHIASF 153


>gi|313200117|ref|YP_004038775.1| DNA repair protein radc [Methylovorus sp. MP688]
 gi|312439433|gb|ADQ83539.1| DNA repair protein RadC [Methylovorus sp. MP688]
          Length = 224

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++A E    GT+    V+ REIV+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 IFLDAQNRVLAHEEMFAGTLTQTSVHPREIVKRALYYNAGAVILAHNHPSGVAEPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  + T L+ +++ V DH ++  +  +SF  +GL
Sbjct: 188 MITAQLKTALDLVDVRVLDHFVVAGNTTLSFAERGL 223


>gi|301154718|emb|CBW14181.1| protein associated with replication fork, possible DNA repair
           protein [Haemophilus parainfluenzae T3T1]
          Length = 221

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVTNVYPREIIKESLYCNAAALILAHNHPSGIAEPSYSDK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ II     + I + DH I+GK    SF
Sbjct: 185 MITQKIIEAAELMEIRILDHFIVGKGTCYSF 215


>gi|256827872|ref|YP_003156600.1| DNA repair protein RadC [Desulfomicrobium baculatum DSM 4028]
 gi|256577048|gb|ACU88184.1| DNA repair protein RadC [Desulfomicrobium baculatum DSM 4028]
          Length = 226

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 53/93 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + +D  N LI+ E   +GT+D    Y REI++  L   A  +ILVHNHP GNP PS  D 
Sbjct: 130 ILVDNQNRLISFERVFQGTVDQTAAYPREILELALRHHAGGLILVHNHPGGNPVPSSQDK 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T+ I    + L + + DHII+  + + SF+ 
Sbjct: 190 ALTETIARLADDLGLRLLDHIIVTAETYSSFRA 222


>gi|332042741|gb|EGI78941.1| DNA repair protein RadC [Lacinutrix algicola 5H-3-7-4]
          Length = 232

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I     S+G I    V +R  ++  LE+ A  IIL HNHPSG  NPS AD 
Sbjct: 136 IYLNNSNKVIQKNQLSKGGITGTLVDVRLALKIALEVGAVGIILAHNHPSGTLNPSLADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           N+TQ + T    L+I V DH+II + A+ SF
Sbjct: 196 NLTQKLKTAAQSLDIKVLDHLIITEKAYFSF 226


>gi|300869667|ref|YP_003784538.1| putative DNA repair protein RadC [Brachyspira pilosicoli 95/1000]
 gi|300687366|gb|ADK30037.1| putative DNA repair protein, RadC [Brachyspira pilosicoli 95/1000]
          Length = 230

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 55/90 (61%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD +  LI+ E   RGTID   +Y R++V++ L L ++ +IL HNHPSG   PS ADI +
Sbjct: 125 LDINKRLISIEQIFRGTIDSATIYPRDLVEKALSLGSSYVILSHNHPSGIAKPSKADIEI 184

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           T+ I      +NI V DHIII  +   SF+
Sbjct: 185 TEIIYKAFFMVNIKVLDHIIIAGNIHYSFR 214


>gi|167561868|ref|ZP_02354784.1| DNA repair protein RadC [Burkholderia oklahomensis EO147]
          Length = 173

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 77  LFLDARHRLLRMEETAHGSLTRMAVYPREIVRRALSLNAAALIVAHNHPSGAVRPSAADR 136

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH ++G     SF
Sbjct: 137 RLTRVLRDALALIDVRLMDHFVVGASDTFSF 167


>gi|15600512|ref|NP_254006.1| DNA repair protein RadC [Pseudomonas aeruginosa PAO1]
 gi|13431808|sp|Q9HTN5|Y5319_PSEAE RecName: Full=UPF0758 protein PA5319
 gi|9951636|gb|AAG08704.1|AE004944_8 DNA repair protein RadC [Pseudomonas aeruginosa PAO1]
          Length = 224

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 54/84 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +++ EV  +G+ID   VY R++V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 128 LFLDTRHRVLSFEVLFQGSIDGASVYPRQVVKRTLAHNAAALILTHNHPSGDARPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T  +   L  +++ V DH IIG
Sbjct: 188 QLTARLKEALALIDVRVLDHFIIG 211


>gi|297621459|ref|YP_003709596.1| DNA repair protein radC family [Waddlia chondrophila WSU 86-1044]
 gi|297376760|gb|ADI38590.1| DNA repair protein radC family [Waddlia chondrophila WSU 86-1044]
          Length = 231

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    LI  ++ S GT+ H   + RE+    +   A S+++ HNHPSG+P PS  DI
Sbjct: 128 LLLDTKGDLITQKIISIGTLSHTLAHPREVFFDAVRHKAASLVIAHNHPSGDPTPSRHDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT  +I     + I + DH+IIG   FVS +
Sbjct: 188 EMTAQLIKAGELMGIPLQDHLIIGSRTFVSLR 219


>gi|49081838|gb|AAT50319.1| PA5319 [synthetic construct]
          Length = 225

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 54/84 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +++ EV  +G+ID   VY R++V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 128 LFLDTRHRVLSFEVLFQGSIDGASVYPRQVVKRTLAHNAAALILTHNHPSGDARPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T  +   L  +++ V DH IIG
Sbjct: 188 QLTARLKEALALIDVRVLDHFIIG 211


>gi|329119079|ref|ZP_08247771.1| DNA repair protein RadC [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464818|gb|EGF11111.1| DNA repair protein RadC [Neisseria bacilliformis ATCC BAA-1200]
          Length = 224

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N LI     +RGT+    VY+RE+V+  L+  A ++IL HNHP G+P PS+ADI
Sbjct: 128 LLLNSRNRLIDCVELARGTVAENAVYVREVVKLALDRHAAALILAHNHPGGSPEPSEADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
             T  +   L  +++ + DH +I     VSF  +GL
Sbjct: 188 AFTGRLKQALELVDVRLLDHFVITAQRAVSFAERGL 223


>gi|238755011|ref|ZP_04616359.1| DNA repair protein RadC [Yersinia ruckeri ATCC 29473]
 gi|238706715|gb|EEP99084.1| DNA repair protein RadC [Yersinia ruckeri ATCC 29473]
          Length = 159

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E    G+I+   V+ REIV+  L  +A +++L HNHPSG   PS+AD 
Sbjct: 63  LFLDNQHRLLECETLFSGSINSSEVHPREIVKAALRHNAAAVVLAHNHPSGYAEPSEADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ  +  L  + + V DH ++G    VSF
Sbjct: 123 QVTQRTVNALTLVEVRVLDHFVVGGKEVVSF 153


>gi|87120857|ref|ZP_01076749.1| DNA repair protein RadC [Marinomonas sp. MED121]
 gi|86163695|gb|EAQ64968.1| DNA repair protein RadC [Marinomonas sp. MED121]
          Length = 224

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 51/84 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + LI  +    GTID   VY RE+V+  L  +A + IL HNHPSG   PS ADI
Sbjct: 128 MFLDSQHRLIHFQEMFYGTIDAAAVYPREVVKMALSYNAAACILAHNHPSGVSEPSQADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +TQ +   L+ ++I + DH +IG
Sbjct: 188 YITQKLQQALSLVDINLLDHFVIG 211


>gi|323486933|ref|ZP_08092249.1| DNA repair protein RadC [Clostridium symbiosum WAL-14163]
 gi|323691981|ref|ZP_08106230.1| DNA repair protein RadC [Clostridium symbiosum WAL-14673]
 gi|323399796|gb|EGA92178.1| DNA repair protein RadC [Clostridium symbiosum WAL-14163]
 gi|323503990|gb|EGB19803.1| DNA repair protein RadC [Clostridium symbiosum WAL-14673]
          Length = 230

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N+LI D +  RGT++      RE+    L   A  IILVHNHPSG+P+PS  D 
Sbjct: 134 MMLNTKNVLIKDSLIFRGTVNMSVASPREMFIEALRYHAVHIILVHNHPSGDPSPSSEDK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      L I + DHIIIG +++ SFK   II
Sbjct: 194 KLTAQVKEAGALLGIRLLDHIIIGDNSYFSFKERGII 230


>gi|95931398|ref|ZP_01314108.1| DNA repair protein RadC [Desulfuromonas acetoxidans DSM 684]
 gi|95132554|gb|EAT14243.1| DNA repair protein RadC [Desulfuromonas acetoxidans DSM 684]
          Length = 233

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+ D   S G++    V+ RE+    +  SA +++ VHNHPSG+P PS  DI
Sbjct: 134 LLLDAKNRLLKDVRISEGSLTASIVHPREVFTAVVRESAAAVLFVHNHPSGDPTPSREDI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++TQ +    + L + V DHIIIG D++ S 
Sbjct: 194 SITQRLKEAGDLLGVRVLDHIIIGHDSYTSL 224


>gi|319952212|ref|YP_004163479.1| DNA repair protein radc [Cellulophaga algicola DSM 14237]
 gi|319420872|gb|ADV47981.1| DNA repair protein RadC [Cellulophaga algicola DSM 14237]
          Length = 232

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N ++    QS+G+I    V +R I++  LELSA +IIL HNHPSG   PS AD 
Sbjct: 136 VYLNNSNKVLHHSQQSKGSITGTLVDVRLIMKEALELSAVAIILAHNHPSGTLKPSLADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ I      L+I V DH+II +  + SF
Sbjct: 196 QITQKIKNAAEGLDIKVLDHLIITQAEYFSF 226


>gi|119503524|ref|ZP_01625607.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2080]
 gi|119460586|gb|EAW41678.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2080]
          Length = 223

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 55/90 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    L+A      GT++  PVY REIV   L++ A++II+ HNHPSG   PS ADI
Sbjct: 124 LFLDTQRQLLACRDMFFGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCLAPSVADI 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
            +T  +   L  ++I + DH+I+ +  ++S
Sbjct: 184 QLTDRLRRALGLIDIDLLDHLIVAQGRYLS 213


>gi|258647040|ref|ZP_05734509.1| DNA repair protein RadC [Prevotella tannerae ATCC 51259]
 gi|260853150|gb|EEX73019.1| DNA repair protein RadC [Prevotella tannerae ATCC 51259]
          Length = 228

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 54/92 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++   L+++ +  RG +    V +R +  + LE  AT++ + HNHPSGNP PS AD 
Sbjct: 131 MFLNRRLQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPRPSQADD 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +TQ +      L+I + DHII+    + S++
Sbjct: 191 RLTQKVAQAARLLDIRLVDHIIVADKCYYSYQ 222


>gi|153800936|ref|ZP_01955522.1| DNA repair protein [Vibrio cholerae MZO-3]
 gi|124123527|gb|EAY42270.1| DNA repair protein [Vibrio cholerae MZO-3]
          Length = 157

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DNCTSF 151


>gi|332139456|ref|YP_004425194.1| DNA repair protein RadC [Alteromonas macleodii str. 'Deep ecotype']
 gi|238693291|sp|B4S2B7|Y049_ALTMD RecName: Full=UPF0758 protein MADE_00049
 gi|327549478|gb|AEA96196.1| DNA repair protein RadC [Alteromonas macleodii str. 'Deep ecotype']
          Length = 225

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LIA      GTI+   VY RE++++ +  +A +IILVHNHPSG   PS ADI
Sbjct: 128 LMLDSQHQLIAFRTMFNGTINSAAVYPRELIKQVMIDNAAAIILVHNHPSGVAEPSHADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  I + +  +++ V DH ++G    +SF  +GL
Sbjct: 188 RLTTEIKSAMASIDVPVLDHFVVGDKETISFAQRGL 223


>gi|242278123|ref|YP_002990252.1| DNA repair protein RadC [Desulfovibrio salexigens DSM 2638]
 gi|242121017|gb|ACS78713.1| DNA repair protein RadC [Desulfovibrio salexigens DSM 2638]
          Length = 225

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 48/87 (55%)

Query: 6   HNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQN 65
            N +I  E  S GT+D   VY RE+V   L  +A+ +IL HNHP G+P+PS  D   T  
Sbjct: 134 RNKVICWERLSEGTVDKTAVYPREVVALALRHNASGVILTHNHPGGDPSPSPEDTERTME 193

Query: 66  IITTLNPLNIIVHDHIIIGKDAFVSFK 92
           I      + I + DH+I+  D F SFK
Sbjct: 194 IAALCQDMEIRLLDHVIVTADRFHSFK 220


>gi|293406039|ref|ZP_06650027.1| DNA repair protein [Escherichia coli FVEC1412]
 gi|291426883|gb|EFE99913.1| DNA repair protein [Escherichia coli FVEC1412]
          Length = 155

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 54/84 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T+ ++  L  ++I V DH+I+G
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVG 150


>gi|298528608|ref|ZP_07016012.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1]
 gi|298512260|gb|EFI36162.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1]
          Length = 143

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
             +D  N  ++ ++ S+GT+D  PV+ REI++  L   A+ +IL HNHP G+PNPS  D 
Sbjct: 47  FLVDNKNHFLSKKLISKGTVDQAPVFPREILRYALLKQASGLILSHNHPGGDPNPSVQDR 106

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT  I      L I + DH+I+ +    SF+
Sbjct: 107 EMTARIKKAAILLGIRLLDHVIVSRTGHYSFQ 138


>gi|99035915|ref|ZP_01314963.1| hypothetical protein Wendoof_01000193 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 218

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 1/92 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   L+ +E    G ++  PVYI+EI+++ L  +AT II+ HNHP G+  PS+ D 
Sbjct: 123 LYLNKRRQLVGEE-SYIGEMEKAPVYIKEIIRKALIKNATLIIMSHNHPGGSLEPSEEDQ 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+++    + +++ + DHIII    + SFK
Sbjct: 182 AVTKSLAAACSTVSVKLFDHIIITSGGYFSFK 213


>gi|332036123|gb|EGI72599.1| DNA repair protein RadC [Pseudoalteromonas haloplanktis ANT/505]
          Length = 224

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+ DE+   GTI+   VY RE+V+  L+ +A ++I  HNHPSG   PS AD 
Sbjct: 128 LYLDSQNRLVKDEILFYGTINSASVYPREVVKAALKNNAAAVIFAHNHPSGIAEPSQADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  +   L  ++I V DHII+G +  VSF  +GL
Sbjct: 188 LITNKLQQALQLVDISVLDHIIVGGETCVSFAERGL 223


>gi|325919704|ref|ZP_08181706.1| DNA replication and repair protein RadC [Xanthomonas gardneri ATCC
           19865]
 gi|325549812|gb|EGD20664.1| DNA replication and repair protein RadC [Xanthomonas gardneri ATCC
           19865]
          Length = 225

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  +  IA E    GT+D   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LYLDTKHHAIAFEELFTGTLDGADIHTREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L+ + I + DH +IG    VS 
Sbjct: 188 AVTKRLLEALDLVEIRLLDHFVIGDGRPVSL 218


>gi|323157677|gb|EFZ43783.1| DNA repair RadC family protein [Escherichia coli EPECa14]
          Length = 253

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 54/84 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T+ ++  L  ++I V DH+I+G
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVG 145


>gi|160947462|ref|ZP_02094629.1| hypothetical protein PEPMIC_01396 [Parvimonas micra ATCC 33270]
 gi|158446596|gb|EDP23591.1| hypothetical protein PEPMIC_01396 [Parvimonas micra ATCC 33270]
          Length = 287

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I+ +  S+G ++   V+ RE+ +  L  SA SII +HNHPSG+P PS  DI
Sbjct: 190 LLLDTKNKIISWDEISKGDLNSSIVHPREVFKYALRYSANSIICLHNHPSGDPTPSSQDI 249

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ +    + + I + DHIIIG + +VS K
Sbjct: 250 DITKRLEEVGDLVGIRLLDHIIIGYNKYVSLK 281


>gi|310829102|ref|YP_003961459.1| DNA repair protein RadC [Eubacterium limosum KIST612]
 gi|308740836|gb|ADO38496.1| DNA repair protein RadC [Eubacterium limosum KIST612]
          Length = 234

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I  E  S GTI+   V+ RE+  + +   A ++IL HNHPSG+P PS  D 
Sbjct: 138 LLLDNKNKVIKTETISIGTINASLVHPREVFVKAIRQHAAAVILAHNHPSGDPKPSAEDR 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++ +   L I V DH++IG   +VSFK
Sbjct: 198 AITKRLLESGELLGIPVLDHVVIGGADYVSFK 229


>gi|260774791|ref|ZP_05883693.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609216|gb|EEX35371.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450]
          Length = 157

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  + + V DHI+ G D+  SF
Sbjct: 122 RITERLKDALALVEVRVLDHIVTG-DSCTSF 151


>gi|167647755|ref|YP_001685418.1| DNA repair protein RadC [Caulobacter sp. K31]
 gi|167350185|gb|ABZ72920.1| DNA repair protein RadC [Caulobacter sp. K31]
          Length = 196

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/50 (64%), Positives = 42/50 (84%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLD  N LIADEV + GT+DH PVY RE+++R LELS+++IIL+HNHP+
Sbjct: 134 LFLDNKNQLIADEVMNHGTVDHAPVYPREVMRRALELSSSNIILLHNHPT 183


>gi|241759982|ref|ZP_04758080.1| DNA repair protein RadC [Neisseria flavescens SK114]
 gi|241319436|gb|EER55866.1| DNA repair protein RadC [Neisseria flavescens SK114]
          Length = 224

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 54/92 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+IL HNHP  +  PS++D+
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGSSARPSESDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ +   L+ ++I + DH I+      S +
Sbjct: 188 QFTERLKQALSLVDITLLDHFIVTAKETCSLR 219


>gi|289661519|ref|ZP_06483100.1| DNA repair protein RadC [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 156

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 57/90 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + LI      +GT++   VY+RE+ ++ L+L+A ++I+ HNHPS +P PS  D+
Sbjct: 60  IFLDHRHQLIEYAEMFQGTLNEAQVYMREVARKALQLNAAAVIVSHNHPSADPAPSWPDV 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
            MT+ +   L  + + + DHI++G +  VS
Sbjct: 120 VMTKRLREVLELVEVRLLDHIVVGGNRTVS 149


>gi|262191336|ref|ZP_06049528.1| DNA repair protein RadC [Vibrio cholerae CT 5369-93]
 gi|262032791|gb|EEY51337.1| DNA repair protein RadC [Vibrio cholerae CT 5369-93]
          Length = 157

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DTCTSF 151


>gi|229512565|ref|ZP_04402036.1| DNA repair protein RadC [Vibrio cholerae TMA 21]
 gi|229350458|gb|EEO15407.1| DNA repair protein RadC [Vibrio cholerae TMA 21]
          Length = 157

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKTVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DICTSF 151


>gi|160914215|ref|ZP_02076436.1| hypothetical protein EUBDOL_00225 [Eubacterium dolichum DSM 3991]
 gi|158433842|gb|EDP12131.1| hypothetical protein EUBDOL_00225 [Eubacterium dolichum DSM 3991]
          Length = 227

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N ++A +    GT+    V+ REI +  + +    II  HNHPSGNP  SDADI
Sbjct: 128 VFLNQRNQILAYKTLFVGTLTSANVHPREIFKEAMRIGCAKIICAHNHPSGNPQVSDADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +TQ I+     ++I + DHI++G + +VS +
Sbjct: 188 AITQQIMECGQLVSIPLLDHIVVGGNRYVSLR 219


>gi|77361558|ref|YP_341133.1| associated with replication fork DNA repair protein
           [Pseudoalteromonas haloplanktis TAC125]
 gi|123587696|sp|Q3IFE5|Y2643_PSEHT RecName: Full=UPF0758 protein PSHAa2643
 gi|76876469|emb|CAI87691.1| associated with replication fork DNA repair protein
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 224

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI DE+   GTI+   VY RE+V+  L+ +A ++I  HNHPSG   PS AD 
Sbjct: 128 LYLDSQNRLIKDEILFYGTINSASVYPREVVKAALKNNAAAVIFAHNHPSGIAEPSQADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  +   L  ++I V DHII+G +  VSF  +GL
Sbjct: 188 LITNKLQQALQLVDINVLDHIIVGGETCVSFAERGL 223


>gi|251788764|ref|YP_003003485.1| DNA repair protein RadC [Dickeya zeae Ech1591]
 gi|247537385|gb|ACT06006.1| DNA repair protein RadC [Dickeya zeae Ech1591]
          Length = 169

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 54/92 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL   + LI       GT+    VY REIV+  L  +A ++IL HNHPSGN  PS AD+
Sbjct: 73  LFLTTRHRLIEYAELFYGTLATTAVYPREIVRNALSCNAAAVILAHNHPSGNTEPSQADL 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +   L  +++ V DHII+G +  +SF 
Sbjct: 133 MLTRRVSAALALVDVRVLDHIIVGGNDTLSFA 164


>gi|241662298|ref|YP_002980658.1| DNA repair protein RadC [Ralstonia pickettii 12D]
 gi|240864325|gb|ACS61986.1| DNA repair protein RadC [Ralstonia pickettii 12D]
          Length = 164

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  + ++A E   +GT+D   VY R +VQR L L+A+++IL H HPSG   PS AD 
Sbjct: 68  VFLNCQHQVLAYEPMFKGTVDQTSVYPRVLVQRALALNASAVILAHQHPSGMTVPSAADQ 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  +++ V DH+I+GK    SF
Sbjct: 128 VLTDRLKAALAMVDVRVVDHLIVGKGTPYSF 158


>gi|221199269|ref|ZP_03572313.1| DNA repair protein RadC [Burkholderia multivorans CGD2M]
 gi|221205829|ref|ZP_03578844.1| DNA repair protein RadC [Burkholderia multivorans CGD2]
 gi|221174667|gb|EEE07099.1| DNA repair protein RadC [Burkholderia multivorans CGD2]
 gi|221180554|gb|EEE12957.1| DNA repair protein RadC [Burkholderia multivorans CGD2M]
          Length = 214

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+  + L+A ++I+ HNHPSG   PS  D 
Sbjct: 118 LYLDARHGLIDMEENARGSLTRMAVYPREIVRSAMRLNAAALIVAHNHPSGAVQPSAEDR 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH+++GK    SF
Sbjct: 178 RLTRTLRDALALVDVRLLDHVVVGKADTFSF 208


>gi|163786204|ref|ZP_02180652.1| putative DNA repair protein [Flavobacteriales bacterium ALC-1]
 gi|159878064|gb|EDP72120.1| putative DNA repair protein [Flavobacteriales bacterium ALC-1]
          Length = 232

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I     S+G I    V +R +++  LE+ AT+++L HNHPSG   PS AD 
Sbjct: 136 LYLNNSNKIIQKNQLSKGGITGTLVDVRLVLKNALEVGATALVLCHNHPSGTLKPSQADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +      L+I V DH+I+ + A+ SF    II
Sbjct: 196 DITQKLKIAAKSLDIKVLDHLIVTEKAYFSFADEEII 232


>gi|269468964|gb|EEZ80545.1| DNA repair protein RadC [uncultured SUP05 cluster bacterium]
          Length = 226

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 49/67 (73%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GT++   ++ RE+V+  LE +A+++IL HNHPSG+P PS ADI++TQ I   L  +++ V
Sbjct: 146 GTLNQASIHPREVVKTVLEKNASAVILAHNHPSGDPAPSQADIDITQRIKEALALIDVRV 205

Query: 78  HDHIIIG 84
            DH+IIG
Sbjct: 206 LDHVIIG 212


>gi|56459351|ref|YP_154632.1| hypothetical protein IL0240 [Idiomarina loihiensis L2TR]
 gi|73913736|sp|Q5QZB4|Y240_IDILO RecName: Full=UPF0758 protein IL0240
 gi|56178361|gb|AAV81083.1| RadC [Idiomarina loihiensis L2TR]
          Length = 224

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + L+  E   +GTI+  PVY RE+++  ++ +A ++IL HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRLLRYEELFQGTINAAPVYPREVIKLVMQYNAAAVILAHNHPSGVAEPSQADQ 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L  +++ + DH ++G    +SF  +GL
Sbjct: 188 RVTERVKKALTLIDVALLDHFVVGAGDPISFAERGL 223


>gi|84390134|ref|ZP_00991396.1| DNA repair protein [Vibrio splendidus 12B01]
 gi|84376788|gb|EAP93663.1| DNA repair protein [Vibrio splendidus 12B01]
          Length = 157

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 53/85 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I+ HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIMAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK 85
            +T+ +   L  +++ V DHI+ G+
Sbjct: 122 RITERLKGALALVDVRVLDHIVTGE 146


>gi|258516472|ref|YP_003192694.1| DNA repair protein RadC [Desulfotomaculum acetoxidans DSM 771]
 gi|257780177|gb|ACV64071.1| DNA repair protein RadC [Desulfotomaculum acetoxidans DSM 771]
          Length = 233

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +++ E  S GT+    V+ RE+ +  ++ SA ++IL+HNHPSG+P PS  DI
Sbjct: 137 MLLNTKNRVLSLETISVGTLSSSAVHPRELFKIAIKKSAAALILIHNHPSGDPAPSKEDI 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ +      + I V DHIIIG + FVS K
Sbjct: 197 DVTKRLEEAGKIIGIDVLDHIIIGDNKFVSLK 228


>gi|262151185|ref|ZP_06028323.1| DNA repair protein RadC [Vibrio cholerae INDRE 91/1]
 gi|220897838|dbj|BAH11100.1| DNA repair protein RadC-related protein [Vibrio cholerae O1 biovar
           El tor]
 gi|262031016|gb|EEY49642.1| DNA repair protein RadC [Vibrio cholerae INDRE 91/1]
          Length = 157

 Score = 72.0 bits (175), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DTCTSF 151


>gi|37523034|ref|NP_926411.1| DNA repair protein RadC [Gloeobacter violaceus PCC 7421]
 gi|35214037|dbj|BAC91406.1| DNA repair protein [Gloeobacter violaceus PCC 7421]
          Length = 242

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LIA  + S GTID    + REI +  +   A  II+ HNHPSG   PS  D+
Sbjct: 143 LLLDVKNRLIAHRIVSVGTIDETLAHPREIFREAIRQGAAGIIVAHNHPSGVTEPSPEDL 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T  +I     L I V DH+I+G+  F S + L
Sbjct: 203 RLTGQLIECGRTLQIPVLDHVILGQGNFTSLRRL 236


>gi|302389307|ref|YP_003825128.1| DNA replication and repair protein RadC [Thermosediminibacter
           oceani DSM 16646]
 gi|302199935|gb|ADL07505.1| DNA replication and repair protein RadC [Thermosediminibacter
           oceani DSM 16646]
          Length = 237

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 60/92 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I+ E  S G+++   V+ RE+ +  ++ S+ +IILVHNHPSG+P PS  DI
Sbjct: 141 ILLNVKNRVISVEDISIGSLNSSIVHPREVFKPAIKRSSAAIILVHNHPSGDPTPSREDI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++     L I V DH+IIG  ++VSFK
Sbjct: 201 EITRRLVEAGRILGIDVLDHVIIGNPSYVSFK 232


>gi|261210081|ref|ZP_05924379.1| DNA repair protein RadC [Vibrio sp. RC341]
 gi|260840846|gb|EEX67388.1| DNA repair protein RadC [Vibrio sp. RC341]
          Length = 157

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DTCTSF 151


>gi|315127738|ref|YP_004069741.1| replication fork DNA repair protein-associated protein
           [Pseudoalteromonas sp. SM9913]
 gi|315016252|gb|ADT69590.1| replication fork DNA repair protein-associated protein
           [Pseudoalteromonas sp. SM9913]
          Length = 224

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+ DE+   GTI+   VY RE+V+  L+ +A ++I  HNHPSG   PS AD 
Sbjct: 128 LYLDSQNRLLKDEILFYGTINAASVYPREVVKAALKNNAAAVIFSHNHPSGIAEPSQADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  +   L  ++I V DHIIIG ++ VSF  +GL
Sbjct: 188 LITNKLCQALQLVDINVLDHIIIGGESSVSFAERGL 223


>gi|291459235|ref|ZP_06598625.1| DNA repair protein RadC [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291418489|gb|EFE92208.1| DNA repair protein RadC [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 232

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 51/92 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LI D   SRGT     +  R+I +  L     SII+VHNHPSG P PS+ D 
Sbjct: 136 LYLDNQLQLIRDVQLSRGTCSSSAISPRDIFREALRNGGVSIIMVHNHPSGVPEPSEEDR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + T  +      L I + DHII+G +A+ SFK
Sbjct: 196 SFTAELFRLGQCLGIPLIDHIIMGDNAYYSFK 227


>gi|290969098|ref|ZP_06560628.1| putative DNA repair protein RadC [Megasphaera genomosp. type_1 str.
           28L]
 gi|290780858|gb|EFD93456.1| putative DNA repair protein RadC [Megasphaera genomosp. type_1 str.
           28L]
          Length = 229

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL   N LI  +  S GT++      R++ +  ++ +A S++LVHNHPSG+P PS  DI
Sbjct: 133 VFLSVKNRLITVQTLSVGTLNASLARARDVFRLAMQYNAASVVLVHNHPSGDPEPSREDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I+     + I V DHIIIG   FVS 
Sbjct: 193 LLTKQIVKAGEIMGIPVLDHIIIGDGTFVSL 223


>gi|37678709|ref|NP_933318.1| DNA repair protein [Vibrio vulnificus YJ016]
 gi|37197450|dbj|BAC93289.1| DNA repair protein [Vibrio vulnificus YJ016]
          Length = 157

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 52/84 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T+ +   L  +++ V DHI+ G
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG 145


>gi|269121533|ref|YP_003309710.1| DNA repair protein RadC [Sebaldella termitidis ATCC 33386]
 gi|268615411|gb|ACZ09779.1| DNA repair protein RadC [Sebaldella termitidis ATCC 33386]
          Length = 227

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N LI DE    GT+D   V+ RE +++ LE  A S+ILVHNHPSG   PS++DI
Sbjct: 131 LFLNTQNELIKDENLFYGTLDKSAVHPREFIKKVLENDAKSVILVHNHPSGALKPSESDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  L I + DHII+  + + SF
Sbjct: 191 LITSKLKHLLEKLEIKLLDHIIVSPNGYFSF 221


>gi|194290593|ref|YP_002006500.1| DNA repair protein radc [Cupriavidus taiwanensis LMG 19424]
 gi|238692771|sp|B3R6F7|Y2508_CUPTR RecName: Full=UPF0758 protein RALTA_A2508
 gi|193224428|emb|CAQ70439.1| DNA repair protein radC homolog, associated with replication fork
           [Cupriavidus taiwanensis LMG 19424]
          Length = 228

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 52/84 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N ++A E   RGT+    VY RE+ ++ L  +A  II+ HNHP G   PS +DI
Sbjct: 128 LFLDPGNRMVASEELFRGTLTRTSVYPREVARQALAHNAAGIIVAHNHPRGTTAPSQSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           ++T+ +  TL+ +++ + DH I+ 
Sbjct: 188 HLTRELARTLDLIDVRLLDHFIVA 211


>gi|42741710|gb|AAS45108.1| DNA repair protein [Alcaligenes faecalis]
          Length = 176

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 57/96 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD    LI     S+GTI    VY RE+V+  L L+A+++I+ HNHPSG+P PS ADI 
Sbjct: 81  YLDHQFRLIRYMEISQGTISQASVYPREVVKTGLRLNASAVIMAHNHPSGSPTPSQADIT 140

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T ++   L  +++ + DHII+      S   + +I
Sbjct: 141 LTTHLRKALALIDLRLLDHIIVTGKGTSSMASMGLI 176


>gi|331654543|ref|ZP_08355543.1| intergenic-region protein [Escherichia coli M718]
 gi|331047925|gb|EGI20002.1| intergenic-region protein [Escherichia coli M718]
          Length = 163

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LI  E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLITGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVIPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+IIG     SF
Sbjct: 127 LITERLVQALALVDIRVPDHLIIGGSQVFSF 157


>gi|88797504|ref|ZP_01113093.1| DNA repair protein RadC [Reinekea sp. MED297]
 gi|88779676|gb|EAR10862.1| DNA repair protein RadC [Reinekea sp. MED297]
          Length = 224

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   + ++A E   +GTID   VY RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 IWLSAQHQVLAFETLFQGTIDTAAVYPREVVKAALRHNAAAVILAHNHPSGIAEPSQADQ 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ + + L  +++ + DH+++G+   VSF  +GL
Sbjct: 188 MITKRLASALMTVDVRLLDHMVVGQGIVVSFAERGL 223


>gi|322373383|ref|ZP_08047919.1| DNA repair protein RadC [Streptococcus sp. C150]
 gi|321278425|gb|EFX55494.1| DNA repair protein RadC [Streptococcus sp. C150]
          Length = 228

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSHNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + N L I + DH+I+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCNDLGICLLDHLIVGKSTYYSFREER 223


>gi|121534093|ref|ZP_01665918.1| DNA repair protein RadC [Thermosinus carboxydivorans Nor1]
 gi|121307196|gb|EAX48113.1| DNA repair protein RadC [Thermosinus carboxydivorans Nor1]
          Length = 232

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L   N ++A  V S G+++   V+ RE+ +  +  SA ++ILVHNHPSG+P PS  DI
Sbjct: 136 LLLSTKNHVLAMPVISVGSLNASLVHPRELFREAINHSAAAVILVHNHPSGDPTPSREDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T  ++     L I V DH+IIG   +VS K
Sbjct: 196 EITGKMVQAGEILGIAVLDHVIIGDGKYVSLK 227


>gi|163857461|ref|YP_001631759.1| DNA repair protein RadC [Bordetella petrii DSM 12804]
 gi|229485545|sp|A9IU27|Y3149_BORPD RecName: Full=UPF0758 protein Bpet3149
 gi|163261189|emb|CAP43491.1| DNA repair protein radC homolog [Bordetella petrii]
          Length = 225

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LI     +RGT+    VY RE+V+  L   A ++IL HNHPSG+  PS AD 
Sbjct: 129 LYLDSQLNLITSGELARGTLARASVYPREVVREALRHHAAALILAHNHPSGSAQPSQADR 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + T+++   L  + I + DH+I+  D  VS   L ++
Sbjct: 189 DFTRHMQQALALVEIRLLDHLIVAGDTVVSMAELGLL 225


>gi|323339483|ref|ZP_08079762.1| DNA repair protein RadC [Lactobacillus ruminis ATCC 25644]
 gi|323093097|gb|EFZ35690.1| DNA repair protein RadC [Lactobacillus ruminis ATCC 25644]
          Length = 224

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            FLD  N ++  +   +GT++   V+ REI +  L LS   II+VHNHPSG+  PS+ D+
Sbjct: 127 FFLDTKNQVLEQKKIFKGTLNSATVHPREIFKEALRLSTARIIVVHNHPSGDTTPSENDL 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +    + L I + DHII+G  +++S +   II
Sbjct: 187 SLTKRLEECGHLLGIELLDHIIVGNSSYLSMREENII 223


>gi|237704459|ref|ZP_04534940.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|226900825|gb|EEH87084.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|294491633|gb|ADE90389.1| DNA repair protein, RadC family [Escherichia coli IHE3034]
 gi|307554072|gb|ADN46847.1| DNA repair protein [Escherichia coli ABU 83972]
 gi|323956170|gb|EGB51921.1| DNA repair protein RadC [Escherichia coli H263]
          Length = 158

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++  L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKCALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|188996570|ref|YP_001930821.1| DNA repair protein RadC [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931637|gb|ACD66267.1| DNA repair protein RadC [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 229

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA EV ++G+++ V V  R+I+   ++ +   II+ HNHP+ +P PS  DI
Sbjct: 133 LYLNSSNHLIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             T+ + T  N L   + DHII+GK  F SF
Sbjct: 193 EFTKKLQTLANELGFDLLDHIIVGKKDFYSF 223


>gi|153801495|ref|ZP_01956081.1| DNA repair protein RadC family protein [Vibrio cholerae MZO-3]
 gi|124122986|gb|EAY41729.1| DNA repair protein RadC family protein [Vibrio cholerae MZO-3]
          Length = 157

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKDLFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DHI+ G D   SF
Sbjct: 122 RITERLKDALALVDVRVLDHIVTG-DTCTSF 151


>gi|50121779|ref|YP_050946.1| hypothetical protein ECA2855 [Pectobacterium atrosepticum SCRI1043]
 gi|49612305|emb|CAG75755.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 157

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  EV + G I+   V+ REI++  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQHRLIEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGCAEPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T  +  +L+ L++ V DH+++G    +SF
Sbjct: 121 HITDKLKGSLSQLDVRVLDHLVVGGAEVMSF 151


>gi|26248376|ref|NP_754416.1| putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|26108780|gb|AAN80983.1|AE016762_236 Putative radC-like protein yeeS [Escherichia coli CFT073]
          Length = 148

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++  L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKCALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 142


>gi|253995755|ref|YP_003047819.1| DNA repair protein RadC [Methylotenera mobilis JLW8]
 gi|253982434|gb|ACT47292.1| DNA repair protein RadC [Methylotenera mobilis JLW8]
          Length = 224

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L A E    GT+    VY RE+V+R +  +A S+IL HNHPSG    S AD 
Sbjct: 128 LFLDAQNRLNAAEELFSGTLTQTSVYPREVVKRAMHHNAASVILAHNHPSGVAQQSAADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ +   L  +++ V DH I+  +  +SF  +GL
Sbjct: 188 LLTQQLKQALALVDVRVLDHFIVAGNQTLSFAERGL 223


>gi|319892706|ref|YP_004149581.1| DNA repair protein RadC [Staphylococcus pseudintermedius HKU10-03]
 gi|317162402|gb|ADV05945.1| DNA repair protein RadC [Staphylococcus pseudintermedius HKU10-03]
          Length = 227

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 59/90 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N ++ ++    GT++   ++ RE+ +  L+ SA +II++HNHPSG+  PS+ADI
Sbjct: 130 LILNTKNQIVHEQTLFIGTLNSAIIHPREVFKTALKWSANAIIVIHNHPSGDATPSEADI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
             T+ ++     + I + DHI+IG++++VS
Sbjct: 190 ETTKRLVACGEAMGIELLDHIVIGEESYVS 219


>gi|119470592|ref|ZP_01613295.1| associated with replication fork DNA repair protein
           [Alteromonadales bacterium TW-7]
 gi|119446293|gb|EAW27570.1| associated with replication fork DNA repair protein
           [Alteromonadales bacterium TW-7]
          Length = 224

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+ DE+   GTI+   VY RE+V+  L+ +A ++I  HNHPSG   PS AD 
Sbjct: 128 LYLDSQNRLVKDEILFYGTINAASVYPREVVKAALKNNAAAVIFAHNHPSGIAEPSQADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  +   L  ++I V DHII+G +  VSF  +GL
Sbjct: 188 LITNKLQQALQLVDINVLDHIIVGGETCVSFAERGL 223


>gi|227484623|ref|ZP_03914939.1| DNA repair protein RadC [Anaerococcus lactolyticus ATCC 51172]
 gi|227237343|gb|EEI87358.1| DNA repair protein RadC [Anaerococcus lactolyticus ATCC 51172]
          Length = 226

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I+ E+ S G +    V  RE+ +  ++ SA S+IL HNHPSGNP+PS AD+
Sbjct: 130 ILLNNKNEVISKELISIGDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSGNPSPSKADL 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T  +I     L+I V DH+IIG   +VS K
Sbjct: 190 LITHRLIDAGEILDITVLDHLIIGHGTYVSLK 221


>gi|310819987|ref|YP_003952345.1| DNA repair protein RadC [Stigmatella aurantiaca DW4/3-1]
 gi|309393059|gb|ADO70518.1| DNA repair protein RadC [Stigmatella aurantiaca DW4/3-1]
          Length = 249

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 51/91 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  +  N+L+ +   + GT++  PV  RE+    L L AT+++  HNHPSG+P PS  D+
Sbjct: 137 LCFNPRNVLLGNVRVAEGTMNTCPVDPREVYAAALSLRATALVFAHNHPSGDPEPSAQDV 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +      L I V DH+++G   +VS 
Sbjct: 197 RLTAQLAEAGQLLGIKVLDHLVLGDGTYVSL 227


>gi|38638114|ref|NP_943224.1| hypothetical protein pEL60p25 [Erwinia amylovora]
 gi|37682012|gb|AAQ97899.1| ORF25 [Erwinia amylovora]
          Length = 149

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            FL+ HN +IA E   +GTI  V V+ R ++QR L  +A +++L HNHPS N  PS AD 
Sbjct: 53  FFLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTTPSQADK 112

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DH+I+G     SF
Sbjct: 113 LITERLAQVLGMVDVKVLDHLIVGGSDIYSF 143


>gi|113868987|ref|YP_727476.1| DNA repair protein RadC [Ralstonia eutropha H16]
 gi|123133661|sp|Q0K7B3|Y3033_RALEH RecName: Full=UPF0758 protein H16_A3033
 gi|113527763|emb|CAJ94108.1| DNA repair protein [Ralstonia eutropha H16]
          Length = 228

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 50/84 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N ++A E   RGT+    VY RE+ ++ L  +A  II+ HNHP G   PS +DI
Sbjct: 128 LFLDPRNRMVASEEMFRGTLTRTAVYPREVARQALVHNAAGIIVAHNHPRGTTAPSQSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T  +  TL+ +++ + DH I+ 
Sbjct: 188 RLTHELARTLDLIDVRLLDHFIVA 211


>gi|237756348|ref|ZP_04584898.1| DNA repair protein RadC [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691499|gb|EEP60557.1| DNA repair protein RadC [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 152

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA EV ++G+++ V V  R+I+   ++ +   II+ HNHP+ +P PS  DI
Sbjct: 56  LYLNSSNHLIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQEDI 115

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             T+ + T  N L   + DHII+GK  F SF
Sbjct: 116 EFTKKLQTLANELGFDLLDHIIVGKKDFYSF 146


>gi|227872346|ref|ZP_03990699.1| possible DNA repair protein RadC [Oribacterium sinus F0268]
 gi|227841810|gb|EEJ52087.1| possible DNA repair protein RadC [Oribacterium sinus F0268]
          Length = 229

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 52/92 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    L+ D + S+G+ +   +  REI    L  ++   ILVHNHPSG+P+PS  D 
Sbjct: 133 LFLDTKAQLLKDFLLSKGSSNASILSGREIFMEALRAASVCFILVHNHPSGDPHPSREDE 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ I      L I + DHIIIG + + SFK
Sbjct: 193 RATEEIYKAGEYLGIHLMDHIIIGDNQYYSFK 224


>gi|261867145|ref|YP_003255067.1| DNA repair protein RadC [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412477|gb|ACX81848.1| DNA repair protein RadC [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 219

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A +IIL HNHPSG   PS +D 
Sbjct: 123 LFLDNQHRLIKQERLFLGTINKAMVYPREIIKEALACNAAAIILAHNHPSGVAEPSISDK 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I    + ++I V DH +IG   + SF
Sbjct: 183 QITDTIRQAADLVDIRVLDHFVIGNGRYFSF 213


>gi|218778342|ref|YP_002429660.1| DNA repair protein RadC [Desulfatibacillum alkenivorans AK-01]
 gi|218759726|gb|ACL02192.1| DNA repair protein RadC [Desulfatibacillum alkenivorans AK-01]
          Length = 265

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N ++  E    G+++   VY RE++ + L+  A++++L HNHPSGN  PS  DI
Sbjct: 153 VYLDVQNRILNMETPFEGSLNASHVYTRELIDKALKTGASAVLLAHNHPSGNTKPSKNDI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSF 91
            +T  + T    + I + +H+IIGK   + SF
Sbjct: 213 QLTYTLFTAFRSVEIHLLEHLIIGKQGEYYSF 244


>gi|312128297|ref|YP_003993171.1| DNA repair protein radc [Caldicellulosiruptor hydrothermalis 108]
 gi|311778316|gb|ADQ07802.1| DNA repair protein RadC [Caldicellulosiruptor hydrothermalis 108]
          Length = 230

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 47/74 (63%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GT+    VY R++V+  +  +A+S+IL HNHP G+  PS  DI  TQ I+  L+ + + V
Sbjct: 146 GTVKEAVVYPRKVVECAIRYNASSVILAHNHPGGSVRPSMDDIKTTQKIVNALSTIGVAV 205

Query: 78  HDHIIIGKDAFVSF 91
           +DH I+ KD + SF
Sbjct: 206 NDHFIVAKDEYYSF 219


>gi|260061882|ref|YP_003194962.1| putative DNA repair protein [Robiginitalea biformata HTCC2501]
 gi|88786015|gb|EAR17184.1| putative DNA repair protein [Robiginitalea biformata HTCC2501]
          Length = 242

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +++    S+G +    V +R ++++ LEL A S++L HNHPSGN  PS AD 
Sbjct: 146 LYLNNANGVLSRFQLSKGGLTGTLVDVRLLLRKALELHAVSLVLAHNHPSGNLQPSKADR 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      ++I V DH+I+G  A+ SF
Sbjct: 206 QITRKIEKAARSMDIRVLDHLILGGTAYFSF 236


>gi|253576954|ref|ZP_04854278.1| DNA repair protein RadC [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843685|gb|EES71709.1| DNA repair protein RadC [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 162

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +++ EV S GT++   V+ RE+ +  +   A SII VHNHPSG+P PS  D 
Sbjct: 66  LILNTKNRILSKEVISIGTLNSAIVHPREVFKPAIIKGAASIICVHNHPSGDPAPSSEDK 125

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +I     + I V DH++IG + +VS K
Sbjct: 126 KLTERLIQAGEIIGIDVLDHVVIGTEGYVSLK 157


>gi|145299092|ref|YP_001141933.1| RadC family DNA repair protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851864|gb|ABO90185.1| DNA repair protein, RadC family [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 163

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GTID   VY RE+V+  L+ +A ++IL HNHPSG   PS ADI +T+ +   L+ + I V
Sbjct: 84  GTIDSAAVYPREVVKTALKYNAAAVILAHNHPSGIAEPSRADIQITERLQAALDFVEIRV 143

Query: 78  HDHIIIGKDAFVSF--KGL 94
            DH+++  +  VSF  +GL
Sbjct: 144 LDHVVVAGEYSVSFAERGL 162


>gi|118578660|ref|YP_899910.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
 gi|118501370|gb|ABK97852.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
          Length = 163

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++  +  S G+++   V+ RE+ +     +A +I+LVHNHP+G+PNPS  DI
Sbjct: 67  LHLDGKNRIVCFDRVSIGSLNQAIVHPREVFKTACLSNAAAILLVHNHPTGDPNPSSEDI 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +  + + L I V DHII+G D F+SF  +GL
Sbjct: 127 AITKRLKESGDILGIRVLDHIIVGDDEFLSFVERGL 162


>gi|313903989|ref|ZP_07837369.1| DNA repair protein RadC [Eubacterium cellulosolvens 6]
 gi|313471138|gb|EFR66460.1| DNA repair protein RadC [Eubacterium cellulosolvens 6]
          Length = 236

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+ +   SRGT++   +  RE+    L   A S+ILVHNHPSG+P+PS  D 
Sbjct: 136 VMLDTKNHLLGEAEISRGTVNQSLISPRELFLSALSFHAVSVILVHNHPSGDPSPSGDDQ 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ I      L I + DHIIIG   + SF
Sbjct: 196 DVTERIRCAGELLGIRLVDHIIIGDGEYFSF 226


>gi|257094371|ref|YP_003168012.1| DNA repair protein RadC [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257046895|gb|ACV36083.1| DNA repair protein RadC [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 225

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 51/87 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LIA E   RGT+    VY RE+V++ L  +A +++L HNHPSG   PS AD 
Sbjct: 128 LWLDAQNRLIASEELFRGTLTQTSVYPREVVKKALYHNAAAVVLAHNHPSGVAEPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA 87
            +T ++   L  + + V DH I+   +
Sbjct: 188 LLTADLKQVLALVEVRVLDHFIVAAQS 214


>gi|253998052|ref|YP_003050115.1| DNA repair protein RadC [Methylovorus sp. SIP3-4]
 gi|253984731|gb|ACT49588.1| DNA repair protein RadC [Methylovorus sp. SIP3-4]
          Length = 224

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++A E    GT+    V+ REIV+R L  +A ++IL HNHPSG   PS +D 
Sbjct: 128 IFLDAQNRVLAHEEMFAGTLTQTSVHPREIVKRALYYNAGAVILAHNHPSGVAEPSRSDE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  + T L+ +++ V DH ++  +  +SF  +GL
Sbjct: 188 MITAQLKTALDLVDVRVLDHFVVAGNTTLSFAERGL 223


>gi|312863769|ref|ZP_07724007.1| DNA repair protein RadC [Streptococcus vestibularis F0396]
 gi|311101305|gb|EFQ59510.1| DNA repair protein RadC [Streptococcus vestibularis F0396]
          Length = 228

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSRNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + + L I + DHII+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCDDLGICLLDHIIVGKSTYYSFREER 223


>gi|293390968|ref|ZP_06635302.1| DNA repair protein RadC [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951502|gb|EFE01621.1| DNA repair protein RadC [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 219

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A +IIL HNHPSG   PS +D 
Sbjct: 123 LFLDNQHRLIKQERLFLGTINKAMVYPREIIKEALACNAAAIILAHNHPSGVAEPSISDK 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I    + ++I V DH +IG   + SF
Sbjct: 183 QITDTIRQAADLVDIRVLDHFVIGNGRYFSF 213


>gi|188585153|ref|YP_001916698.1| DNA repair protein RadC [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349840|gb|ACB84110.1| DNA repair protein RadC [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 241

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  + L+  ++ S G+++   V+ RE+  R +  SA  +ILVHNHPSG+P PS  DI
Sbjct: 145 VMLNTKSYLLKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPEPSQDDI 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  ++   + L I + DH+IIG   F SF
Sbjct: 205 KLTNRLVAAGDLLGIPIMDHVIIGHQKFYSF 235


>gi|114564978|ref|YP_752492.1| DNA repair protein RadC [Shewanella frigidimarina NCIMB 400]
 gi|122298392|sp|Q07WG1|Y3828_SHEFN RecName: Full=UPF0758 protein Sfri_3828
 gi|114336271|gb|ABI73653.1| DNA repair protein RadC [Shewanella frigidimarina NCIMB 400]
          Length = 225

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 46/75 (61%)

Query: 17  RGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNII 76
           RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD  +T+ I   L  +++ 
Sbjct: 144 RGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADRRITERIKNALATIDVS 203

Query: 77  VHDHIIIGKDAFVSF 91
           + DH+++G    VSF
Sbjct: 204 LLDHMVVGDQEIVSF 218


>gi|330428834|gb|AEC20168.1| DNA repair protein RadC [Pusillimonas sp. T7-7]
          Length = 225

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LI  E  SRGT+    VY REI++  L+  A ++IL HNHPSG   PS+AD+
Sbjct: 129 LYLDSQLRLITTEEISRGTLSQTSVYPREIIKSGLKHHAAALILAHNHPSGVAEPSEADL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+++   L  ++I + DH+II     VS 
Sbjct: 189 ALTRHLKHALALVDIRLLDHLIITGTGAVSL 219


>gi|39997266|ref|NP_953217.1| DNA repair protein RadC [Geobacter sulfurreducens PCA]
 gi|39984156|gb|AAR35544.1| DNA repair protein RadC [Geobacter sulfurreducens PCA]
          Length = 163

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++  +  S G+++   V+ RE+ +     +A +I+LVHNHP+G+PNPS  DI
Sbjct: 67  LHLDGKNRIVCFDRVSIGSLNQAIVHPREVFKTACLSNAAAILLVHNHPTGDPNPSSEDI 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +  + + L I V DHII+G D F+SF
Sbjct: 127 AITKRLKESGDILGIRVLDHIIVGDDEFLSF 157


>gi|229918383|ref|YP_002887029.1| DNA repair protein RadC [Exiguobacterium sp. AT1b]
 gi|229469812|gb|ACQ71584.1| DNA repair protein RadC [Exiguobacterium sp. AT1b]
          Length = 209

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA +    G ++   V+ R++ +  L+LSA   I VHNHPSG+  PS  DI
Sbjct: 111 LYLNTKNQLIARKTLFVGGLNSSIVHPRDVFREALKLSAACFIAVHNHPSGDATPSREDI 170

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +++ ++   N + I   DH+IIG+D +VS K
Sbjct: 171 EVSERLVEAGNIVGIACLDHVIIGEDHYVSMK 202


>gi|290580506|ref|YP_003484898.1| putative DNA repair protein [Streptococcus mutans NN2025]
 gi|254997405|dbj|BAH88006.1| putative DNA repair protein [Streptococcus mutans NN2025]
          Length = 226

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +V   G++       REI+    +  ATS+I+VHNHPSG+  PS+ D+
Sbjct: 129 IYLDTQNRVIKKQVIFIGSVRRSVAEPREILHYACKSMATSLIIVHNHPSGSTYPSENDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ I  + + L I+  DHII+GK  + SF+
Sbjct: 189 RFTEKIKRSCDDLGIVFLDHIIVGKKEYYSFR 220


>gi|323700938|gb|ADY00091.1| hypothetical protein [Escherichia coli]
          Length = 149

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            FL+ HN +IA E   +GTI  V V+ R ++QR L  +A +++L HNHPS N  PS AD 
Sbjct: 53  FFLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTAPSQADK 112

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DH+I+G     SF
Sbjct: 113 LITERLAQVLGMVDVKVLDHLIVGGSDIYSF 143


>gi|24379492|ref|NP_721447.1| DNA repair protein RadC [Streptococcus mutans UA159]
 gi|24377431|gb|AAN58753.1|AE014944_3 putative DNA repair protein RadC [Streptococcus mutans UA159]
          Length = 209

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +V   G++       REI+    +  ATS+I+VHNHPSG+  PS+ D+
Sbjct: 112 IYLDTQNRVIKKQVIFIGSVRRSVAEPREILHYACKSMATSLIIVHNHPSGSTYPSENDL 171

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ I  + + L I+  DHII+GK  + SF+
Sbjct: 172 RFTEKIKRSCDDLGIVFLDHIIVGKKEYYSFR 203


>gi|322516365|ref|ZP_08069290.1| DNA repair protein RadC [Streptococcus vestibularis ATCC 49124]
 gi|322125098|gb|EFX96491.1| DNA repair protein RadC [Streptococcus vestibularis ATCC 49124]
          Length = 228

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSRNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + + L I + DHII+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCDDLGICLLDHIIVGKSTYYSFREER 223


>gi|59713705|ref|YP_206480.1| DNA repair protein RadC [Vibrio fischeri ES114]
 gi|59481953|gb|AAW87592.1| DNA repair protein RadC [Vibrio fischeri ES114]
          Length = 157

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 3/96 (3%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG   PS AD 
Sbjct: 62  LLLDNQHRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADK 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  +   L  +++ V DHI++G +  VSF  +GL
Sbjct: 122 RITTRLKEALALIDVQVLDHIVVG-ETCVSFAERGL 156


>gi|30249435|ref|NP_841505.1| DNA repair protein RadC [Nitrosomonas europaea ATCC 19718]
 gi|54036235|sp|Q82UL9|Y1464_NITEU RecName: Full=UPF0758 protein NE1464
 gi|30138798|emb|CAD85375.1| DNA repair protein radC family [Nitrosomonas europaea ATCC 19718]
          Length = 224

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  +  I  E    GT+    VY RE+V+R L  +A ++I  HNHPSG   PS AD 
Sbjct: 128 IFLDARHRTIVTEELFNGTLTQASVYPREVVKRALYHNAAAMIFAHNHPSGIAEPSTADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +TQ++   L  +++ V DH +IG    VSF  +GL
Sbjct: 188 ILTQSLKQALALVDVKVLDHFVIGSSEVVSFAERGL 223


>gi|300714649|ref|YP_003739452.1| DNA repair protein RadC [Erwinia billingiae Eb661]
 gi|299060485|emb|CAX57592.1| DNA repair protein RadC [Erwinia billingiae Eb661]
          Length = 222

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 2/91 (2%)

Query: 2   FLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           FLD +H ++ A E+ + GT++ V V+ REIV+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 127 FLDNQHRMIHACEMFA-GTLNSVEVHPREIVKEALAKNAAALILAHNHPSGVARPSRADH 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I+     +NI V DHI+IG    VSF
Sbjct: 186 QVTRRIVAACQLMNIHVLDHIVIGHGESVSF 216


>gi|171855257|sp|A3QIP9|Y3481_SHELP RecName: Full=UPF0758 protein Shew_3481
          Length = 225

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 46/75 (61%)

Query: 17  RGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNII 76
           RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD  +T+ +   L  +++ 
Sbjct: 144 RGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGGAEPSHADRRITERLKYALATIDVS 203

Query: 77  VHDHIIIGKDAFVSF 91
           + DH+++G    VSF
Sbjct: 204 LLDHMVVGDREIVSF 218


>gi|163791281|ref|ZP_02185695.1| DNA repair protein RadC [Carnobacterium sp. AT7]
 gi|159873422|gb|EDP67512.1| DNA repair protein RadC [Carnobacterium sp. AT7]
          Length = 230

 Score = 71.2 bits (173), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  E    G ++    + REI +  +  SA  II+ HNHPSGNP PS+ADI
Sbjct: 134 LYLNTKNEIIKKETIFIGGLNSSVAHPREIFRGAVRYSAARIIVGHNHPSGNPEPSEADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ +      + I + DHIIIG+  F+S K
Sbjct: 194 QFTRRMSECGELMGIELLDHIIIGEQEFISLK 225


>gi|260587686|ref|ZP_05853599.1| DNA repair protein RadC [Blautia hansenii DSM 20583]
 gi|331084025|ref|ZP_08333132.1| hypothetical protein HMPREF0992_02056 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260541951|gb|EEX22520.1| DNA repair protein RadC [Blautia hansenii DSM 20583]
 gi|330402387|gb|EGG81957.1| hypothetical protein HMPREF0992_02056 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 231

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+ DE+  +GT++      REI    +   A  I+LVHNHPSG+  PS AD+
Sbjct: 135 MMLDTKNHLLGDEMIFKGTVNSSLANPREIFLSAVSYHAVGILLVHNHPSGDCTPSQADV 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + TQ +      L I + DHIIIG   ++SF+
Sbjct: 195 DFTQRVKEAGELLGIPLLDHIIIGDCKYLSFR 226


>gi|127514409|ref|YP_001095606.1| DNA repair protein RadC [Shewanella loihica PV-4]
 gi|126639704|gb|ABO25347.1| DNA repair protein RadC [Shewanella loihica PV-4]
          Length = 233

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 136 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGGAEPSHADR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH+++G    VSF
Sbjct: 196 RITERLKYALATIDVSLLDHMVVGDREIVSF 226


>gi|90962045|ref|YP_535961.1| DNA repair protein [Lactobacillus salivarius UCC118]
 gi|227891064|ref|ZP_04008869.1| DNA repair protein [Lactobacillus salivarius ATCC 11741]
 gi|301300891|ref|ZP_07207063.1| DNA repair protein RadC [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|90821239|gb|ABD99878.1| DNA repair protein [Lactobacillus salivarius UCC118]
 gi|227867153|gb|EEJ74574.1| DNA repair protein [Lactobacillus salivarius ATCC 11741]
 gi|300851490|gb|EFK79202.1| DNA repair protein RadC [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 225

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 58/95 (61%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +++++V  +GT++   V+ REI +  L  S   I++ HNHPSGN  PS+ DI +
Sbjct: 129 LDTKNQVLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSGNVEPSENDIQL 188

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +I     + I + DH+I+G + ++S    +I+
Sbjct: 189 TKRLINAGKMIGIELIDHVIVGSEVYLSLAEEKIV 223


>gi|84386431|ref|ZP_00989459.1| DNA repair protein [Vibrio splendidus 12B01]
 gi|84378855|gb|EAP95710.1| DNA repair protein [Vibrio splendidus 12B01]
          Length = 158

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 52/85 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I+ HNHPSG   PS AD 
Sbjct: 63  LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIMAHNHPSGYSTPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK 85
            +T+ +   L  +++ V DHI+ G+
Sbjct: 123 RITERLKDALALVDVRVLDHIVTGE 147


>gi|150025420|ref|YP_001296246.1| DNA repair protein RadC [Flavobacterium psychrophilum JIP02/86]
 gi|149771961|emb|CAL43435.1| DNA repair protein RadC [Flavobacterium psychrophilum JIP02/86]
          Length = 231

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I     S+G I    V +R + +  LE +ATSIIL HNHPSG    SDAD 
Sbjct: 135 LFLNNANKVIYKSQISKGGITGTVVDVRVVFKMALEQNATSIILTHNHPSGKLEASDADK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N+T+ +      L+I + DHIII +  ++SF+
Sbjct: 195 NITKQLKLAGQQLSIPILDHIIITEKGYLSFQ 226


>gi|225024085|ref|ZP_03713277.1| hypothetical protein EIKCOROL_00953 [Eikenella corrodens ATCC
           23834]
 gi|224943110|gb|EEG24319.1| hypothetical protein EIKCOROL_00953 [Eikenella corrodens ATCC
           23834]
          Length = 233

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L   + LIA +  SRGT+    VYIRE+ +  L   A S+I+ HNHP G+  PS AD+
Sbjct: 128 MLLSSSHKLIAFQELSRGTVAENTVYIREVAKLALRYHAASLIIAHNHPGGSTEPSSADL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             T+ +   L  L++ + DH I+  +  VSF
Sbjct: 188 AFTRRLQQALALLDVRLLDHFIVAGNRAVSF 218


>gi|300214742|gb|ADJ79158.1| DNA repair protein [Lactobacillus salivarius CECT 5713]
          Length = 225

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 58/95 (61%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +++++V  +GT++   V+ REI +  L  S   I++ HNHPSGN  PS+ DI +
Sbjct: 129 LDTKNQVLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSGNVEPSENDIQL 188

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +I     + I + DH+I+G + ++S    +I+
Sbjct: 189 TKRLINAGKMIGIELIDHVIVGSEVYLSLAEEKIV 223


>gi|216967844|ref|YP_002333352.1| hypothetical protein pCTXM360_p71 [Klebsiella pneumoniae]
 gi|215398016|gb|ACJ65293.1| hypothetical protein [Klebsiella pneumoniae]
          Length = 149

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            FL+ HN +IA E   +GTI  V V+ R ++QR L  +A +++L HNHPS N  PS AD 
Sbjct: 53  FFLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTAPSQADK 112

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DH+I+G     SF
Sbjct: 113 LITERLAQVLGMVDVKVLDHLIVGGSDIYSF 143


>gi|312794199|ref|YP_004027122.1| DNA repair protein radc [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181339|gb|ADQ41509.1| DNA repair protein RadC [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 232

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 47/74 (63%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GT+    VY R++V+  +  +A+S+IL HNHP G+  PS  DI  TQ I+  L+ + + V
Sbjct: 148 GTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDIKTTQKIVNALSTIGVAV 207

Query: 78  HDHIIIGKDAFVSF 91
           +DH I+ KD + SF
Sbjct: 208 NDHFIVAKDEYYSF 221


>gi|311277441|ref|YP_003939672.1| DNA repair protein RadC [Enterobacter cloacae SCF1]
 gi|308746636|gb|ADO46388.1| DNA repair protein RadC [Enterobacter cloacae SCF1]
          Length = 221

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++ +A ++IL HNHPSG+  PS +D 
Sbjct: 125 IFLDNQNRVLKHTRMFAGTLSHVEVHPREIVREAIKANAAALILAHNHPSGSAAPSRSDR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +I     + I V DH +IG+    SF
Sbjct: 185 MVTDKVIKCCQFMEIRVVDHFVIGRGESFSF 215


>gi|27383464|ref|NP_774994.1| hypothetical protein pCTX-M3_035 [Citrobacter freundii]
 gi|27261317|gb|AAN87658.1| putative protein [Citrobacter freundii]
          Length = 149

 Score = 70.9 bits (172), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            FL+ HN +IA E   +GTI  V V+ R ++QR L  +A +++L HNHPS N  PS AD 
Sbjct: 53  FFLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTAPSQADK 112

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ V DH+I+G     SF
Sbjct: 113 LITERLAQVLGMVDVKVLDHLIVGGSDIYSF 143


>gi|330812589|ref|YP_004357051.1| putative DNA repair protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380697|gb|AEA72047.1| putative DNA repair protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 224

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 53/84 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + ++  E   RG+ID   V+ R++V+R L  +A ++IL HNHPSGN  PS AD 
Sbjct: 128 LFLNSKHQVLTFEALFRGSIDSASVHPRQVVKRALAHNAAALILCHNHPSGNTEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T+ +   L  +++ V DH I+G
Sbjct: 188 VLTERLQEALELIDVRVLDHFIVG 211


>gi|222528576|ref|YP_002572458.1| DNA repair protein RadC [Caldicellulosiruptor bescii DSM 6725]
 gi|312623124|ref|YP_004024737.1| DNA repair protein radc [Caldicellulosiruptor kronotskyensis 2002]
 gi|222455423|gb|ACM59685.1| DNA repair protein RadC [Caldicellulosiruptor bescii DSM 6725]
 gi|312203591|gb|ADQ46918.1| DNA repair protein RadC [Caldicellulosiruptor kronotskyensis 2002]
          Length = 232

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 47/74 (63%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GT+    VY R++V+  +  +A+S+IL HNHP G+  PS  DI  TQ I+  L+ + + V
Sbjct: 148 GTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDIKTTQKIVNALSTIGVAV 207

Query: 78  HDHIIIGKDAFVSF 91
           +DH I+ KD + SF
Sbjct: 208 NDHFIVAKDEYYSF 221


>gi|114330110|ref|YP_746332.1| DNA repair protein RadC [Nitrosomonas eutropha C91]
 gi|114307124|gb|ABI58367.1| DNA repair protein RadC [Nitrosomonas eutropha C91]
          Length = 167

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  + ++A E   +GT+    VY R +VQR LEL+A+++I  H HPSG   PS AD 
Sbjct: 70  VFLNSQHQVLACECLFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADR 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L+ ++I V DH IIGK    SF
Sbjct: 130 AITNRLKFILSMIDIRVVDHFIIGKGEPYSF 160


>gi|269137403|ref|YP_003294103.1| DNA repair protein [Edwardsiella tarda EIB202]
 gi|267983063|gb|ACY82892.1| DNA repair protein [Edwardsiella tarda EIB202]
          Length = 147

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 58/96 (60%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++       GT++   VY RE+V+  L+ +A ++ILVHNHPSG+P  SDADI
Sbjct: 51  LLLDNRNRVLLWRELFYGTLNQTAVYPREVVKLALQHNAAAVILVHNHPSGHPEASDADI 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   +  +++ + DH I+  D  VS   +GL
Sbjct: 111 ALTRRLQQAMALIDVRIPDHFIVAGDHTVSMAERGL 146


>gi|306831281|ref|ZP_07464441.1| DNA repair protein RadC [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426517|gb|EFM29629.1| DNA repair protein RadC [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 232

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I       G++       REI+    +  ATS+I+VHNHPSG+P PS+ D+
Sbjct: 135 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             TQ +  +   + II  DHI+IGK  + SF+
Sbjct: 195 QFTQKMKRSCEDIGIICLDHIVIGKYQYYSFR 226


>gi|119357420|ref|YP_912064.1| DNA repair protein RadC [Chlorobium phaeobacteroides DSM 266]
 gi|119354769|gb|ABL65640.1| DNA repair protein RadC [Chlorobium phaeobacteroides DSM 266]
          Length = 166

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 56/87 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            FL   N +   ++ SRGT++   ++ RE+ +  +  +A +IILVHNHPSGNP PS+AD 
Sbjct: 68  FFLSTKNYITGTQLVSRGTLNASLIHPREVFRGAILANANAIILVHNHPSGNPEPSNADK 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA 87
            +T+ I ++ + + I + DH+IIG + 
Sbjct: 128 QVTKQIRSSADIIGIELLDHVIIGSNG 154


>gi|190570723|ref|YP_001975081.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019846|ref|ZP_03335648.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190356995|emb|CAQ54384.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212994594|gb|EEB55240.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 218

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   LI +E    G ++  PVYI+EI ++ L  +AT +I+ HNHP G+  PS+ D 
Sbjct: 123 LYLNKRRQLIGEESYI-GEMEKAPVYIKEITRKALIKNATLVIMSHNHPGGSLEPSEEDQ 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+++    + +++ + DHIII    + SF+
Sbjct: 182 EVTKSLAAACSTVSVRLFDHIIITSGGYFSFR 213


>gi|312878119|ref|ZP_07738052.1| DNA repair protein RadC [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795101|gb|EFR11497.1| DNA repair protein RadC [Caldicellulosiruptor lactoaceticus 6A]
          Length = 232

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 47/74 (63%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GT+    VY R++V+  +  +A+S+IL HNHP G+  PS  DI  TQ I+  L+ + + V
Sbjct: 148 GTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDIKTTQKIVNALSTIGVAV 207

Query: 78  HDHIIIGKDAFVSF 91
           +DH I+ KD + SF
Sbjct: 208 NDHFIVAKDEYYSF 221


>gi|301060527|ref|ZP_07201367.1| putative DNA repair protein RadC [delta proteobacterium NaphS2]
 gi|300445370|gb|EFK09295.1| putative DNA repair protein RadC [delta proteobacterium NaphS2]
          Length = 243

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
            FL + N +I D     G++    VY REI+   LE  A  ++ VHNHPSG+P PS  D 
Sbjct: 133 FFLTRKNQVITDCDLFEGSLTGSAVYPREIMTLALEHKAAGLVFVHNHPSGDPAPSPEDQ 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T++++     + I V DH+IIG + + SF
Sbjct: 193 HLTRDLVWAAMLMGIQVLDHLIIGNNRYFSF 223


>gi|291278966|ref|YP_003495801.1| DNA repair protein RadC [Deferribacter desulfuricans SSM1]
 gi|290753668|dbj|BAI80045.1| DNA repair protein RadC [Deferribacter desulfuricans SSM1]
          Length = 232

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    +   +V S G+++      +E+ ++ L   A ++IL HNHPSGN  PS +DI
Sbjct: 136 VFLDSKGRIKEYKVLSSGSVNESYFPPKELAKQALVRDAVAVILAHNHPSGNLKPSQSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+N+   L  ++I + DHII+ K+ F+SFK
Sbjct: 196 RYTKNVKNALELVDIALVDHIIVTKNGFLSFK 227


>gi|145301064|ref|YP_001143905.1| DNA repair protein RadC [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142853836|gb|ABO92157.1| DNA repair protein RadC [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 327

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/91 (42%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I       GT+D   V+ REIVQ  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 231 LLLDNQHRVIQFVELFYGTLDSASVWPREIVQIALKHNAAAVILAHNHPSGVAEPSRADR 290

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I+  L  ++I V DH++IG    VSF
Sbjct: 291 QITDRILAALALIDIRVLDHLVIGDGITVSF 321


>gi|86132165|ref|ZP_01050761.1| DNA repair protein RadC [Dokdonia donghaensis MED134]
 gi|85817499|gb|EAQ38679.1| DNA repair protein RadC [Dokdonia donghaensis MED134]
          Length = 237

 Score = 70.9 bits (172), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++  E  S+G +    V +R +++  +ELSA  +IL HNHPSG   PS AD 
Sbjct: 141 LFLNNSNKVLRKEQVSKGGLTGTLVDVRMVMKTAIELSAVGMILGHNHPSGTLKPSQADK 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  + T    L+I V DHII+ +  + SF
Sbjct: 201 MLTTKLKTAAQSLDIQVLDHIIVTEKQYFSF 231


>gi|313206016|ref|YP_004045193.1| DNA repair protein radc [Riemerella anatipestifer DSM 15868]
 gi|312445332|gb|ADQ81687.1| DNA repair protein RadC [Riemerella anatipestifer DSM 15868]
 gi|315022329|gb|EFT35357.1| DNA repair protein RadC [Riemerella anatipestifer RA-YM]
 gi|325336543|gb|ADZ12817.1| DNA repair protein [Riemerella anatipestifer RA-GD]
          Length = 225

 Score = 70.5 bits (171), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N ++  +  S+G I    V +R + +  LE  AT+II+VHNHPSGN +PS+ D+
Sbjct: 129 IFLNQSNKVLQKKPLSKGGISGTVVDVRLMFKMALEHYATAIIVVHNHPSGNASPSEQDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      L+I + DHIII K+ + SF
Sbjct: 189 EITKKIKEAGVLLDIRLLDHIIIAKNKYFSF 219


>gi|307354756|ref|YP_003895807.1| DNA repair protein RadC [Methanoplanus petrolearius DSM 11571]
 gi|307157989|gb|ADN37369.1| DNA repair protein RadC [Methanoplanus petrolearius DSM 11571]
          Length = 219

 Score = 70.5 bits (171), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+    LI   + + G ++H PV+ RE+    +   A S++ VHNHPSG+P PS  D+
Sbjct: 123 MTLNGAGELIEQRIVTVGLLNHSPVHPREVFADAITDRAASVLFVHNHPSGSPEPSVQDV 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ +      L I V DHII  K  +VSFK
Sbjct: 183 DITKRLYEAAEILGIGVLDHIITAKRGYVSFK 214


>gi|145589913|ref|YP_001156510.1| DNA repair protein RadC [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048319|gb|ABP34946.1| DNA replication and repair protein RadC [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 239

 Score = 70.5 bits (171), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 53/83 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LI  +   RG+I    VY REI++  L  +A+++I+ HNHPSGNP PS AD 
Sbjct: 139 LYLDPRLHLIECQELFRGSITQTAVYPREILKEALSRNASALIVAHNHPSGNPLPSQADQ 198

Query: 61  NMTQNIITTLNPLNIIVHDHIII 83
           ++TQ ++  L  ++I + DH I+
Sbjct: 199 DLTQTLLKALQWVDISLLDHCIV 221


>gi|306833394|ref|ZP_07466521.1| DNA repair protein RadC [Streptococcus bovis ATCC 700338]
 gi|304424164|gb|EFM27303.1| DNA repair protein RadC [Streptococcus bovis ATCC 700338]
          Length = 232

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I       G++       REI+    +  ATS+I+VHNHPSG+P PS+ D+
Sbjct: 135 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             TQ I  +   + II  DH++IGK  + SF+
Sbjct: 195 RFTQKIKRSCEDIGIICLDHLVIGKYQYYSFR 226


>gi|120437195|ref|YP_862881.1| DNA repair protein RadC [Gramella forsetii KT0803]
 gi|117579345|emb|CAL67814.1| DNA repair protein RadC [Gramella forsetii KT0803]
          Length = 232

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I     S+G I    V +R  +++ LEL A S+IL HNHPSGN   S+AD 
Sbjct: 136 IYLNNSNKVIEQFQISKGGITGTLVDVRITLKKALELGAVSLILAHNHPSGNLKASEADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ + T    L+I V DHII+ + +++SF
Sbjct: 196 QLTRKLKTASESLDIKVLDHIIVTEKSYLSF 226


>gi|89094938|ref|ZP_01167869.1| DNA repair protein RadC [Oceanospirillum sp. MED92]
 gi|89080804|gb|EAR60045.1| DNA repair protein RadC [Oceanospirillum sp. MED92]
          Length = 224

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTI+   VY REIV R L  +A +++L HNHPSG   PSDAD 
Sbjct: 128 LFLDNKHRVIQYENLFWGTINAAAVYPREIVSRALHHNAGAVVLAHNHPSGVAEPSDADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  +++ V DH+++G     SF
Sbjct: 188 QITLKLQKALALVDVRVIDHMVVGDGEVFSF 218


>gi|153814880|ref|ZP_01967548.1| hypothetical protein RUMTOR_01095 [Ruminococcus torques ATCC 27756]
 gi|317500393|ref|ZP_07958617.1| DNA repair protein RadC [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089600|ref|ZP_08338499.1| hypothetical protein HMPREF1025_02082 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847911|gb|EDK24829.1| hypothetical protein RUMTOR_01095 [Ruminococcus torques ATCC 27756]
 gi|316898148|gb|EFV20195.1| DNA repair protein RadC [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330404968|gb|EGG84506.1| hypothetical protein HMPREF1025_02082 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 233

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 52/92 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+    LI +   S GTID   V  RE+     + +A  IIL+HNHP G+P PS  D+
Sbjct: 135 IFLNTRCRLIGECNVSEGTIDSALVSPRELFIEAFKRNAYGIILLHNHPGGDPTPSREDV 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ I      L I + DHI+IG + FVS K
Sbjct: 195 MITRRIYEAGELLGIRLFDHIVIGDNCFVSMK 226


>gi|320355157|ref|YP_004196496.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032]
 gi|320123659|gb|ADW19205.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032]
          Length = 159

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 55/86 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A     RG+I+   V+ RE+V+  L L+A S+I+ HNHPSG   PS  D+
Sbjct: 62  LFLDSRHQVLAWREMFRGSINRNSVHPREVVKEALTLNAASVIIAHNHPSGGIQPSKEDL 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKD 86
            +T+ +   L  +++ V DH+I+G++
Sbjct: 122 ELTRTLTEILKVIDVRVLDHLIVGEE 147


>gi|330818061|ref|YP_004361766.1| DNA repair protein RadC [Burkholderia gladioli BSR3]
 gi|327370454|gb|AEA61810.1| DNA repair protein RadC [Burkholderia gladioli BSR3]
          Length = 282

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E  + G++  + VY REIV+R LE  A ++I+ HNHPSG   PS  D 
Sbjct: 186 LYLDAQHRLLELEESTIGSLTRMAVYPREIVRRALESGAAALIVAHNHPSGVVRPSAEDR 245

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ + DHI++G+    SF
Sbjct: 246 RLTQLLRDALALVDVRLTDHIVVGESETFSF 276


>gi|309795803|ref|ZP_07690218.1| DNA repair protein RadC family protein [Escherichia coli MS 145-7]
 gi|308120682|gb|EFO57944.1| DNA repair protein RadC family protein [Escherichia coli MS 145-7]
          Length = 156

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + L+  E+   GT+ H  V+ RE+V+  L+ +A ++IL HNHPSG    S  D 
Sbjct: 61  MYLDNQHCLLEREILFIGTLSHTEVHPREVVKSALKHNAAAVILAHNHPSGTTEISQQDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MTQ I+  L  + + V DH+++G +  +SF  L ++
Sbjct: 121 HMTQRIVKALALVEVRVLDHLVVGNET-ISFAELGLL 156


>gi|169335849|ref|ZP_02863042.1| hypothetical protein ANASTE_02275 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258587|gb|EDS72553.1| hypothetical protein ANASTE_02275 [Anaerofustis stercorihominis DSM
           17244]
          Length = 224

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N++I  E+ S GTI+   V++RE+ +  ++ +A SIIL HNHPSG+  PS  D 
Sbjct: 128 ILLNTKNMVIETELISIGTINTSLVHVREVFRNAIKKNANSIILAHNHPSGDSTPSIEDE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ +      + I V DH+IIGKD + SF
Sbjct: 188 HLTKRLKDAGELIGIKVIDHVIIGKDNYFSF 218


>gi|313887968|ref|ZP_07821646.1| DNA repair protein RadC [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845923|gb|EFR33306.1| DNA repair protein RadC [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 239

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 52/76 (68%)

Query: 16  SRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNI 75
           S+GTI+   V+ RE+ +  +  +A SIIL+HNHP+G+P+PS  DI +T+N++     + I
Sbjct: 158 SKGTINMTIVHSREVFRAAISDNAHSIILLHNHPTGDPSPSKEDIKLTKNLLEASKIIGI 217

Query: 76  IVHDHIIIGKDAFVSF 91
            + DHIIIG + + SF
Sbjct: 218 DILDHIIIGDNKYFSF 233


>gi|254448902|ref|ZP_05062357.1| DNA repair protein RadC [gamma proteobacterium HTCC5015]
 gi|198261439|gb|EDY85729.1| DNA repair protein RadC [gamma proteobacterium HTCC5015]
          Length = 224

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 57/85 (67%), Gaps = 2/85 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           L+LD +H +++ +E+  RGT+D   VY RE+V+  L+ +A ++I  HNHPSG   PS AD
Sbjct: 128 LWLDTRHRVILYEEL-FRGTLDGASVYPREVVKAALKHNAAAVIFAHNHPSGIAEPSRAD 186

Query: 60  INMTQNIITTLNPLNIIVHDHIIIG 84
            ++T+ +   L  ++I V DHI+IG
Sbjct: 187 EHITRRLKDALGLVDIRVLDHIVIG 211


>gi|114567158|ref|YP_754312.1| DNA repair protein RadC [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317861|sp|Q0AWG3|Y1642_SYNWW RecName: Full=UPF0758 protein Swol_1642
 gi|114338093|gb|ABI68941.1| DNA repair protein RadC [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 235

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+   LI  +  S G +    V+ RE+ +  ++ SA S+ILVHNHPSG+P PS  DI
Sbjct: 139 LYLDRKGGLITMQDISIGGLHSSIVHPREVFKTAVKKSAASMILVHNHPSGDPTPSQEDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     + I + DH+IIG+  + S K   +I
Sbjct: 199 EITRRLIEAGKIMGIEILDHVIIGEINYCSLKARGLI 235


>gi|296125781|ref|YP_003633033.1| DNA repair protein RadC [Brachyspira murdochii DSM 12563]
 gi|296017597|gb|ADG70834.1| DNA repair protein RadC [Brachyspira murdochii DSM 12563]
          Length = 227

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 55/90 (61%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD +   I+ E   RGTID   +Y R++V++ L L ++ +I+ HNHPSG   PS  DIN+
Sbjct: 124 LDVNKKFISMEHIFRGTIDSATIYPRDLVEKSLSLGSSYVIVSHNHPSGIAKPSKEDINI 183

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           T  +      ++I + DHIII  +++ SF+
Sbjct: 184 TNVLYKAFKMVDIKMLDHIIIAANSYYSFR 213


>gi|124267880|ref|YP_001021884.1| DNA repair protein RadC [Methylibium petroleiphilum PM1]
 gi|171769841|sp|A2SJB0|Y2695_METPP RecName: Full=UPF0758 protein Mpe_A2695
 gi|124260655|gb|ABM95649.1| DNA repair protein radC family [Methylibium petroleiphilum PM1]
          Length = 222

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+A E   RGT++   VY RE+V+R L L+A + IL HNHPSG   PS AD 
Sbjct: 126 LFLDTQHRLLAFEELFRGTLNQASVYPREVVKRALALNAAAAILAHNHPSGVAEPSRADE 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ +   L  +++ V DH ++ + + VSF
Sbjct: 186 ALTQALKAALALVDVRVLDHFVVARGSVVSF 216


>gi|206890013|ref|YP_002248228.1| DNA repair protein [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741951|gb|ACI21008.1| DNA repair protein [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 224

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    LI +   S GT++   ++ RE+ +  ++ SA ++IL+HNHPSG+P PS+ DI
Sbjct: 128 LLLDTKLRLIREVKVSEGTLNQSLIHPREVFKDAVKESAYAVILIHNHPSGDPTPSEQDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +      L I + DH+IIG   + S K
Sbjct: 188 EITKKLKKASEILEIPILDHVIIGSGKYFSMK 219


>gi|88707202|ref|ZP_01104892.1| DNA repair protein RadC [Congregibacter litoralis KT71]
 gi|88698545|gb|EAQ95674.1| DNA repair protein RadC [Congregibacter litoralis KT71]
          Length = 170

 Score = 70.5 bits (171), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 4/97 (4%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           LFLD +H +L   E+  +GTID   VY R +VQ  L L+A +++L HNHPSG   PS AD
Sbjct: 74  LFLDSQHRVLQYAEL-FQGTIDGAAVYPRVVVQEALGLNAAAVVLFHNHPSGVAEPSTAD 132

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            N+T+ +   L  +++ V DH+++      SF  +GL
Sbjct: 133 RNITKRLQDALALIDVRVLDHLVVSAGEATSFAERGL 169


>gi|326791184|ref|YP_004309005.1| DNA repair protein RadC [Clostridium lentocellum DSM 5427]
 gi|326541948|gb|ADZ83807.1| DNA repair protein RadC [Clostridium lentocellum DSM 5427]
          Length = 234

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 55/91 (60%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD    +I  E  S+G++    V+ RE+ +  ++ SA SII VHNHPSG+P PS+ D+ 
Sbjct: 139 LLDAKCKMIGYETVSKGSLTASIVHPREVYRIAIQKSAHSIIAVHNHPSGDPTPSEEDLQ 198

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           MT+ +    + + I + DHIIIG   + SFK
Sbjct: 199 MTKRLQKVGDLVGIPLLDHIIIGDGIYKSFK 229


>gi|313889050|ref|ZP_07822708.1| DNA repair protein RadC family protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312844923|gb|EFR32326.1| DNA repair protein RadC family protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 148

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 55/89 (61%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD    +I   V S+GTI+  PV  RE+ Q+    +A SII+ HNHPSG+P PS  DI  
Sbjct: 54  LDVKKKVIGTFVISQGTINMTPVSPREVFQKAFLANAHSIIVAHNHPSGDPEPSKQDIAF 113

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           T++++     ++I + D II+G +++ SF
Sbjct: 114 TRDLMEAGKIMDIQICDSIILGHNSYYSF 142


>gi|300772729|ref|ZP_07082599.1| DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761032|gb|EFK57858.1| DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33861]
          Length = 229

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ ++++  ++  +G  D  PV +R I++  L   A+S+ILVHNHPSG+  PS+ D+
Sbjct: 132 LYLNRASVILNQQLIGKGGNDFTPVDVRIILKHALNCQASSMILVHNHPSGSLKPSNQDL 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ I+     ++I V DH+I     + SF+
Sbjct: 192 QLTKKIVDASKIMDIRVMDHVIFTNSKYFSFQ 223


>gi|288986959|ref|YP_003456922.1| DNA repair protein RadC [Allochromatium vinosum DSM 180]
 gi|288898338|gb|ADC64172.1| DNA repair protein RadC [Allochromatium vinosum DSM 180]
          Length = 167

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           L LD +H +L   E+  RGTID   V+ RE+V+  +E  A ++I  HNHPSG+ +PS AD
Sbjct: 71  LLLDNRHRVLRYQEL-FRGTIDTAYVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQAD 129

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +T+ +   L  + + V DHII+G+   +SF
Sbjct: 130 RTLTRKLQDALALIEVRVLDHIIVGEGRGMSF 161


>gi|154248875|ref|YP_001409700.1| DNA repair protein RadC [Fervidobacterium nodosum Rt17-B1]
 gi|154152811|gb|ABS60043.1| DNA repair protein RadC [Fervidobacterium nodosum Rt17-B1]
          Length = 225

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    +I  +  S+GTI+    + R+I +  +  S+T IIL HNHPSG+P PS  DI
Sbjct: 124 IFLDTKLKVIGSKDVSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPSKDDI 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ I      L I +HDH+IIG+  F S +
Sbjct: 184 ELTKKIKKAGELLGINLHDHVIIGQ-TFYSLR 214


>gi|116048641|ref|YP_792559.1| hypothetical protein PA14_54860 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115583862|gb|ABJ09877.1| hypothetical protein PA14_54860 [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 202

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 47/75 (62%)

Query: 17  RGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNII 76
           RGT++  P+Y R +V+R L  +A  +++ HNHPSG   PS ADI  T+ +   LN ++I 
Sbjct: 122 RGTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATPSQADIAATRQLKAALNLVDIE 181

Query: 77  VHDHIIIGKDAFVSF 91
           + DH +IG+    SF
Sbjct: 182 LLDHFVIGRGEPFSF 196


>gi|83311181|ref|YP_421445.1| DNA repair protein [Magnetospirillum magneticum AMB-1]
 gi|82946022|dbj|BAE50886.1| DNA repair protein [Magnetospirillum magneticum AMB-1]
          Length = 110

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 39/53 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53
           LFLD+ N LIADEVQ  GT+DH P+Y RE+V+R L L A++II+VHN     P
Sbjct: 52  LFLDRKNTLIADEVQQTGTVDHTPLYPREVVKRALALHASAIIMVHNRTCRRP 104


>gi|293392460|ref|ZP_06636780.1| DNA repair protein RadC [Serratia odorifera DSM 4582]
 gi|291424862|gb|EFE98071.1| DNA repair protein RadC [Serratia odorifera DSM 4582]
          Length = 159

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+A E    GTI+   V+ RE+V+  ++ +A S +L HNHPS    PS AD 
Sbjct: 63  LWLDNQNRLLAQETLFTGTINSTTVHPRELVKSAMKHNAASAVLAHNHPSQLAEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I T L  +++ V DH+++G    VSF
Sbjct: 123 QITDRIKTALQLVDVRVVDHLVVGGLDIVSF 153


>gi|325978185|ref|YP_004287901.1| DNA repair protein radC [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325178113|emb|CBZ48157.1| DNA repair protein radC [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 226

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I       G++       REI+    +  ATS+I+VHNHPSG+P PS+ D+
Sbjct: 129 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             TQ +      + II  DHI+IGK  + SF+
Sbjct: 189 QFTQKMKRACEDIGIICLDHIVIGKYQYYSFR 220


>gi|134296674|ref|YP_001120409.1| DNA repair protein RadC [Burkholderia vietnamiensis G4]
 gi|172044368|sp|A4JH21|Y2579_BURVG RecName: Full=UPF0758 protein Bcep1808_2579
 gi|134139831|gb|ABO55574.1| DNA replication and repair protein RadC [Burkholderia vietnamiensis
           G4]
          Length = 258

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+R L L+A S+I+ HNHPSG   PS  D 
Sbjct: 162 LYLDARHGLIEVEESARGSLTRMAVYPREIVRRALMLNAASLIIAHNHPSGAVQPSAEDR 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  ++  + DH+++G     SF
Sbjct: 222 RLTRVLHEALALVDAKLLDHVVVGTADTFSF 252


>gi|294012615|ref|YP_003546075.1| DNA repair protein RadC [Sphingobium japonicum UT26S]
 gi|292675945|dbj|BAI97463.1| DNA repair protein RadC [Sphingobium japonicum UT26S]
          Length = 275

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 50/92 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF +     IADE    GT  HV + + E+V+  +   +  ++  HNHPSG P PS AD+
Sbjct: 179 LFFNDACDAIADERIWPGTSTHVELPLGELVRHAIACGSPRLLFAHNHPSGAPQPSRADV 238

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ ++     L I VHDHII+ +    SF+
Sbjct: 239 EFTRRLVRICKDLQIRVHDHIIVSRHGSFSFR 270


>gi|253991430|ref|YP_003042786.1| hypothetical protein PAU_03957 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782880|emb|CAQ86045.1| similar putative radc-like protein ykfg of escherichia coli
           [Photorhabdus asymbiotica]
          Length = 156

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E+   GT+ H  V+ RE+V+  L+ +A ++IL HNHPSG  + S  D 
Sbjct: 61  LYLDNQHCLLEREILFTGTLSHTEVHPREVVKLALKYNAAAVILAHNHPSGTTDISQQDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++TQ I+  L  + + V DH+++G +  VSF
Sbjct: 121 HITQRIVKALALVEVRVLDHLVVGNEV-VSF 150


>gi|116628169|ref|YP_820788.1| DNA repair protein RadC [Streptococcus thermophilus LMD-9]
 gi|122267235|sp|Q03JN0|Y1430_STRTD RecName: Full=UPF0758 protein STER_1430
 gi|116101446|gb|ABJ66592.1| DNA repair protein [Streptococcus thermophilus LMD-9]
          Length = 228

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSRNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + + L I + DH+I+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCDDLGICLLDHLIVGKSTYYSFREER 223


>gi|288905210|ref|YP_003430432.1| Putaitve DNA repair protein (RadC) [Streptococcus gallolyticus
           UCN34]
 gi|288731936|emb|CBI13501.1| Putaitve DNA repair protein (RadC) [Streptococcus gallolyticus
           UCN34]
          Length = 226

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I       G++       REI+    +  ATS+I+VHNHPSG+P PS+ D+
Sbjct: 129 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             TQ +      + II  DHI+IGK  + SF+
Sbjct: 189 QFTQKMKRACEDIGIICLDHIVIGKYQYYSFR 220


>gi|254520230|ref|ZP_05132286.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA]
 gi|226913979|gb|EEH99180.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA]
          Length = 229

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +I  +   +G+++   V+ REI +  L+ S++SII+ HNHPSG+P PS  DI
Sbjct: 133 IMLDTKNNIIGIKDVFKGSLNTSIVHPREIFKEALKKSSSSIIICHNHPSGDPTPSKEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N+T  +      + + + DH+IIGK  FVS K
Sbjct: 193 NITLRLKECSKIIGVDLLDHLIIGKGKFVSLK 224


>gi|228477172|ref|ZP_04061810.1| DNA repair protein RadC [Streptococcus salivarius SK126]
 gi|228251191|gb|EEK10362.1| DNA repair protein RadC [Streptococcus salivarius SK126]
          Length = 228

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSRNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + + L I + DH+I+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCDDLGICLLDHLIVGKSTYYSFREER 223


>gi|310659827|ref|YP_003937548.1| hypothetical protein CLOST_2528 [Clostridium sticklandii DSM 519]
 gi|308826605|emb|CBH22643.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 159

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 55/90 (61%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N   +  V S+G+++   V+ RE+ +  +  +A +++L HNHPSGNP PS  DI +
Sbjct: 65  LDTKNQPTSVNVCSKGSLNASLVHPREVFKTAVISNAATVLLAHNHPSGNPEPSKEDIKI 124

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           T+ +      L I V DH+IIG D++ SFK
Sbjct: 125 TKRLNEAGKILGIKVLDHLIIGSDSYYSFK 154


>gi|302871177|ref|YP_003839813.1| DNA repair protein RadC [Caldicellulosiruptor obsidiansis OB47]
 gi|302574036|gb|ADL41827.1| DNA repair protein RadC [Caldicellulosiruptor obsidiansis OB47]
          Length = 230

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 47/74 (63%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GT+    VY R++V+  +  +A+S+IL HNHP G+  PS  DIN TQ I+  L+ + + V
Sbjct: 146 GTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDINTTQKIVNALSTIGVTV 205

Query: 78  HDHIIIGKDAFVSF 91
           +DH I+  D + SF
Sbjct: 206 NDHFIVAGDKYYSF 219


>gi|28867326|ref|NP_789945.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213970685|ref|ZP_03398810.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato T1]
 gi|301382572|ref|ZP_07230990.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato Max13]
 gi|302063061|ref|ZP_07254602.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato K40]
 gi|302133591|ref|ZP_07259581.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|37999601|sp|Q88BD1|Y086_PSESM RecName: Full=UPF0758 protein PSPTO_0086
 gi|28850560|gb|AAO53640.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213924519|gb|EEB58089.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato T1]
 gi|331018553|gb|EGH98609.1| hypothetical protein PLA106_21168 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 224

 Score = 70.1 bits (170), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R L  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRALAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           ++T+ +   L  +++ V DH+I+G    +S   KGL
Sbjct: 188 DLTKRLKEALKLVDVHVLDHVIVGDGEPLSMVEKGL 223


>gi|170021431|ref|YP_001726385.1| DNA repair protein RadC [Escherichia coli ATCC 8739]
 gi|169756359|gb|ACA79058.1| DNA repair protein RadC [Escherichia coli ATCC 8739]
          Length = 159

 Score = 70.1 bits (170), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E    GTI+H  V+ RE+V+  L+ +  ++I+ H+HPSG   PS AD 
Sbjct: 63  LFLDNQHRLIAHETLFTGTINHTQVHPREVVKAGLKHNCAAVIVAHSHPSGEAEPSKADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I   L+ ++I + DH+++G     SF
Sbjct: 123 QVTTRIQQALDLVDIRLLDHLVVGGMEITSF 153


>gi|313891737|ref|ZP_07825342.1| DNA repair protein RadC [Dialister microaerophilus UPII 345-E]
 gi|313119731|gb|EFR42918.1| DNA repair protein RadC [Dialister microaerophilus UPII 345-E]
          Length = 227

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 51/90 (56%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +L+  N L+     +RG +    V I+E ++  L   A +IILVHNHPSG P+PS  DI 
Sbjct: 132 YLNIKNKLLGYREITRGGLQETVVDIKEALKWALRFKAYAIILVHNHPSGVPDPSREDIR 191

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            T+  +     L+I+V DHIIIG   F S 
Sbjct: 192 TTERFVKAGKILDIVVLDHIIIGDGNFKSL 221


>gi|282889987|ref|ZP_06298522.1| hypothetical protein pah_c008o090 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500180|gb|EFB42464.1| hypothetical protein pah_c008o090 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 238

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 53/89 (59%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D    +I     + GT+    V+ RE+    +   A S+ILVHNHPSG+P PS  D+++T
Sbjct: 138 DVKGYVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPTPSKEDLDVT 197

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + ++     + I V+DHIIIG+D +VS +
Sbjct: 198 KTLVAVGRLVGICVNDHIIIGRDRYVSLR 226


>gi|220929963|ref|YP_002506872.1| DNA repair protein RadC [Clostridium cellulolyticum H10]
 gi|220000291|gb|ACL76892.1| DNA repair protein RadC [Clostridium cellulolyticum H10]
          Length = 229

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N ++  E  S G+++   V+ RE+    ++    SII +HNHPSG+P PS  D+
Sbjct: 133 ILLDTKNKVLKTESISIGSLNASIVHPREVFSEAVKCGCNSIIFIHNHPSGDPTPSKEDL 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T  +I   N L I V DHII+G   +VS K
Sbjct: 193 QTTDRLINAGNILGIKVLDHIILGDGRYVSLK 224


>gi|55823375|ref|YP_141816.1| DNA repair protein RadC [Streptococcus thermophilus CNRZ1066]
 gi|73913743|sp|Q5LYU6|Y1465_STRT1 RecName: Full=UPF0758 protein str1465
 gi|55739360|gb|AAV63001.1| DNA repair protein [Streptococcus thermophilus CNRZ1066]
          Length = 228

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILYYACHLMATSLIVVHNHPSGEAYPSRNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + + L I + DH+I+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCDDLGICLLDHLIVGKSTYYSFREER 223


>gi|78042658|ref|YP_359204.1| DNA repair protein RadC [Carboxydothermus hydrogenoformans Z-2901]
 gi|123577004|sp|Q3AF80|Y341_CARHZ RecName: Full=UPF0758 protein CHY_0341
 gi|77994773|gb|ABB13672.1| DNA repair protein RadC [Carboxydothermus hydrogenoformans Z-2901]
          Length = 226

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N L  + + + G ++H  V   +I +  +++ A ++I+ HNHPSG+P PS  DI
Sbjct: 130 LYLNTKNQLCGENIVAIGGVNHAGVSPGDIFREAVKIGAYAVIIAHNHPSGDPTPSKEDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + T  +      L I + DHII+G++ ++S K  R+ 
Sbjct: 190 DFTGRVKKASEILGIKLLDHIILGENKYISMKAERLF 226


>gi|55821449|ref|YP_139891.1| DNA repair protein RadC [Streptococcus thermophilus LMG 18311]
 gi|73913744|sp|Q5M3F9|Y1465_STRT2 RecName: Full=UPF0758 protein stu1465
 gi|55737434|gb|AAV61076.1| DNA repair protein [Streptococcus thermophilus LMG 18311]
 gi|312278780|gb|ADQ63437.1| DNA repair protein RadC [Streptococcus thermophilus ND03]
          Length = 228

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILYYACHLMATSLIVVHNHPSGEAYPSRNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + + L I + DH+I+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCDDLGICLLDHLIVGKSTYYSFREER 223


>gi|161615563|ref|YP_001589528.1| hypothetical protein SPAB_03337 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|200390680|ref|ZP_03217291.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205351604|ref|YP_002225405.1| hypothetical protein SG0271 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|161364927|gb|ABX68695.1| hypothetical protein SPAB_03337 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|199603125|gb|EDZ01671.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205271385|emb|CAR36178.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326626631|gb|EGE32974.1| Putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 159

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E    GTI+H  V+ RE+V+  L+ +A ++I+ H HPSG  +PS AD 
Sbjct: 63  LFLDNQHRLIAHETLFSGTINHTQVHPREVVKSGLKHNAAAVIVAHCHPSGLADPSLADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L+ ++I + DH+++G    VSF
Sbjct: 123 QITERLRQALDLVDIRLLDHLVVGGMEIVSF 153


>gi|220936022|ref|YP_002514921.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997332|gb|ACL73934.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7]
          Length = 166

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +IA E    GTID   VY R +++R +E + +++I  HNHPSG   PS AD 
Sbjct: 70  VFLDSQHRVIAFEPMFHGTIDGASVYPRAVLKRAIEHNCSAVIFAHNHPSGVTEPSHADK 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  + + L  +++ V DH I+G++   SF
Sbjct: 130 AITTRLKSVLELVDVRVLDHFIVGEETPFSF 160


>gi|329121132|ref|ZP_08249763.1| DNA repair protein RadC [Dialister micraerophilus DSM 19965]
 gi|327471294|gb|EGF16748.1| DNA repair protein RadC [Dialister micraerophilus DSM 19965]
          Length = 246

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 51/89 (57%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +L+  N L+     +RG +    V I+E ++  L   A +IILVHNHPSG P+PS  DI 
Sbjct: 151 YLNIKNKLLGYREITRGGLQETVVDIKEALKWALRFKAYAIILVHNHPSGVPDPSREDIR 210

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
            T+  +     L+I+V DHIIIG   F S
Sbjct: 211 TTERFVKAGKILDIVVLDHIIIGDGNFKS 239


>gi|85713468|ref|ZP_01044458.1| DNA repair protein RadC [Nitrobacter sp. Nb-311A]
 gi|85699372|gb|EAQ37239.1| DNA repair protein RadC [Nitrobacter sp. Nb-311A]
          Length = 53

 Score = 70.1 bits (170), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 41/53 (77%)

Query: 45 VHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          +HN+PSG+P PS ADI MT++II   +PL I VHDHII+GK+   S KGLR+I
Sbjct: 1  MHNYPSGDPTPSQADIQMTRSIIDISSPLGISVHDHIIVGKNGHASLKGLRLI 53


>gi|304414796|ref|ZP_07395755.1| DNA repair protein RadC [Candidatus Regiella insecticola LSR1]
 gi|304283148|gb|EFL91561.1| DNA repair protein RadC [Candidatus Regiella insecticola LSR1]
          Length = 181

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    +I+ +    G+I  V ++ REIV+  L+++A ++IL HNHPSG   PS+AD 
Sbjct: 85  LFLDNQYRVISHDELFIGSISSVEIHPREIVREALKVNAAALILSHNHPSGQAEPSEADN 144

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  II     L+I + DH++IG   +VSF
Sbjct: 145 LITVRIIKACALLDIRLLDHLVIGHGEYVSF 175


>gi|255067544|ref|ZP_05319399.1| DNA repair protein RadC [Neisseria sicca ATCC 29256]
 gi|255048165|gb|EET43629.1| DNA repair protein RadC [Neisseria sicca ATCC 29256]
          Length = 226

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+I+ HNHP G+  PS +DI
Sbjct: 128 LLLNRQNRLIAMRELSRGTVAENTVYIREIVKLALDEYADSLIIAHNHPGGSATPSQSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T  +   L  +++ + DH I+      S +
Sbjct: 188 AFTGRLKQALALVDVSLLDHFIVTAKEVCSMR 219


>gi|221211489|ref|ZP_03584468.1| DNA repair protein RadC [Burkholderia multivorans CGD1]
 gi|221168850|gb|EEE01318.1| DNA repair protein RadC [Burkholderia multivorans CGD1]
          Length = 256

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+  + ++A ++I+ HNHPSG   PS  D 
Sbjct: 160 LYLDARHGLIDMEENTRGSLTRMAVYPREIVRSAMRMNAAALIVAHNHPSGAVQPSAEDR 219

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH+++GK    SF
Sbjct: 220 RLTRTLRDALALVDVRLLDHVVVGKADTFSF 250


>gi|197120145|ref|YP_002140572.1| DNA repair protein RadC [Geobacter bemidjiensis Bem]
 gi|197089505|gb|ACH40776.1| protein of unknown function DUF2466 [Geobacter bemidjiensis Bem]
          Length = 231

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I+    S G+++   V+ RE+    +  SA ++IL+HNHP+G+P PS  D+
Sbjct: 135 LLLDGKNRIISRAQISEGSLNQSIVHPREVFNVAVRHSAAAMILLHNHPTGDPAPSPEDM 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      L I V DHIIIG++ F SF
Sbjct: 195 EVTRRLCEAGQLLGIRVLDHIIIGENEFYSF 225


>gi|118581981|ref|YP_903231.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
 gi|166218787|sp|A1AV03|Y3582_PELPD RecName: Full=UPF0758 protein Ppro_3582
 gi|118504691|gb|ABL01174.1| DNA replication and repair protein RadC [Pelobacter propionicus DSM
           2379]
          Length = 229

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I     S G+++   V+ RE+  + ++ SA ++ILVHNHP+G+P PS  DI
Sbjct: 133 LLLDGKNRIIRRVQVSEGSLNQSIVHPREVFCQAVKESAAAVILVHNHPTGDPTPSQEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      + I V DHIIIG   ++SF
Sbjct: 193 AITRRLKEAGEIMGIRVLDHIIIGDGEYLSF 223


>gi|332170536|gb|AEE19791.1| DNA repair protein RadC [Krokinobacter diaphorus 4H-3-7-5]
          Length = 237

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++  E  S+G +    V +R +++  +ELSA  +IL HNHPSG   PS AD 
Sbjct: 141 LFLNNSNKVLRKEQVSKGGLTGTLVDVRLVMKTAIELSAVGMILGHNHPSGTLKPSQADK 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  + T    L+I V DHII+ +  + SF
Sbjct: 201 LLTAKLKTAAQSLDIQVLDHIIVTEKQYFSF 231


>gi|261378701|ref|ZP_05983274.1| DNA repair protein RadC [Neisseria cinerea ATCC 14685]
 gi|269144853|gb|EEZ71271.1| DNA repair protein RadC [Neisseria cinerea ATCC 14685]
          Length = 225

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LI+    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+  PS  DI
Sbjct: 128 LLLNRQNQLISVRELSRGTVAENTLYIREIVKLALDEYADSLIIAHNHPGGSAEPSHEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 188 AFTGRLAQAMSLVDVSLLDHFIVTSRSVCSFRQLGLM 224


>gi|119943849|ref|YP_941529.1| DNA repair protein RadC [Psychromonas ingrahamii 37]
 gi|171704612|sp|A1SR15|Y056_PSYIN RecName: Full=UPF0758 protein Ping_0056
 gi|119862453|gb|ABM01930.1| DNA repair protein RadC [Psychromonas ingrahamii 37]
          Length = 225

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 50/74 (67%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           G+ID   V+ R I Q+ L  +A +IILVHNHPSG+P+ S+AD  +TQ I++ L  +++ V
Sbjct: 146 GSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSASEADKMITQKIVSALQLIDVRV 205

Query: 78  HDHIIIGKDAFVSF 91
            DH+++G     SF
Sbjct: 206 LDHLVVGHKKCTSF 219


>gi|27375189|ref|NP_766718.1| hypothetical protein bsr0078 [Bradyrhizobium japonicum USDA 110]
 gi|27348325|dbj|BAC45343.1| bsr0078 [Bradyrhizobium japonicum USDA 110]
          Length = 53

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 40/53 (75%)

Query: 45 VHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          +HNHPSG+P+PS ADI MT+ II    PL I VHDHII+GK+   S KG+++I
Sbjct: 1  MHNHPSGDPSPSQADIQMTKAIIDIARPLGIAVHDHIIVGKNGHSSLKGMKLI 53


>gi|331005601|ref|ZP_08328971.1| DNA repair protein RadC [gamma proteobacterium IMCC1989]
 gi|330420574|gb|EGG94870.1| DNA repair protein RadC [gamma proteobacterium IMCC1989]
          Length = 224

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +    GT++   VY REIV+  L  +A ++I  HNHPSG   PS AD 
Sbjct: 128 LFLDSQHQLIRYQEVFFGTVNAANVYPREIVKLALAYNACAVIFAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++TQ +   LN +++ V DH+I+G     SF
Sbjct: 188 HITQELKDALNLIDVRVLDHLIVGDGDIHSF 218


>gi|238796699|ref|ZP_04640205.1| DNA repair protein RadC [Yersinia mollaretii ATCC 43969]
 gi|238719430|gb|EEQ11240.1| DNA repair protein RadC [Yersinia mollaretii ATCC 43969]
          Length = 161

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+A E    G+I    V+ RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 63  LYLDNQHRLLACETLFTGSIRSTEVHPREVVKAALRHNAAAVILAHNHPSGEAEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  ++  L  +++ V DH+I+G    VSF
Sbjct: 123 QITDRLVNALALVDVKVLDHLIVGGLDIVSF 153


>gi|295698144|ref|YP_003602800.1| DNA repair protein RadC [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295060256|gb|ADF64992.1| DNA repair protein RadC [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 147

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 52/90 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  + LI+ E+   GTI+   +  RE+ +  L L+A ++I  HNHPSG P PS ADI
Sbjct: 51  LYLNNQHQLISFELIHSGTINSCVISPREVARLALMLNAQAVIFAHNHPSGTPEPSRADI 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
           NMT  + T L    I   DH I+  +  VS
Sbjct: 111 NMTARLKTALELFEISTLDHFIVAGNDVVS 140


>gi|223940790|ref|ZP_03632624.1| DNA repair protein RadC [bacterium Ellin514]
 gi|223890547|gb|EEF57074.1| DNA repair protein RadC [bacterium Ellin514]
          Length = 244

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 57/85 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+    LI  E  ++GT+D + ++ RE+ +  +  +A++I+L HNHPSG+P PS+ADI
Sbjct: 141 VLLNTRRKLIRVENITQGTLDTLLIHPREVFKSAISANASAIVLAHNHPSGDPTPSEADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK 85
            +T+++I     L I + DHII+G+
Sbjct: 201 KVTRDLIRAGQLLKIEILDHIILGR 225


>gi|127512189|ref|YP_001093386.1| DNA repair protein RadC [Shewanella loihica PV-4]
 gi|126637484|gb|ABO23127.1| DNA repair protein RadC [Shewanella loihica PV-4]
          Length = 157

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + LI       GTID   VY RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 62  MMLDSQHRLIEFNEMFFGTIDAANVYPREVVKAVLLCNAAAVILAHNHPSGCAEPSAADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I  L+ +++ V DHI++G D  VSF
Sbjct: 122 RITERLINALSTIDVPVLDHIVVG-DQCVSF 151


>gi|319644748|ref|ZP_07998981.1| RadC protein [Bacillus sp. BT1B_CT2]
 gi|317392557|gb|EFV73351.1| RadC protein [Bacillus sp. BT1B_CT2]
          Length = 97

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 54/92 (58%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          ++L+  N +I       G+++   V+ RE+ +  L+ SA S I VHNHPSG+P PS  DI
Sbjct: 1  MYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEALKRSAASFICVHNHPSGDPAPSREDI 60

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +TQ +  +   L I + DHIIIG   FVS K
Sbjct: 61 EVTQRLHESGQLLGIELLDHIIIGDQKFVSLK 92


>gi|261820684|ref|YP_003258790.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163]
 gi|261604697|gb|ACX87183.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163]
          Length = 157

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 57/91 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  + LI  E+ + G I+   V+ REI++  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLNNQHRLIEKEIIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGCAEPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T  +  +L+ L++ V DH+++G    VSF
Sbjct: 121 HITDRLKESLSQLDVRVLDHLVVGGAEVVSF 151


>gi|119773468|ref|YP_926208.1| DNA repair protein RadC [Shewanella amazonensis SB2B]
 gi|166218792|sp|A1S2D2|Y327_SHEAM RecName: Full=UPF0758 protein Sama_0327
 gi|119765968|gb|ABL98538.1| DNA repair protein RadC [Shewanella amazonensis SB2B]
          Length = 225

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 46/75 (61%)

Query: 17  RGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNII 76
           RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD  +T+ +   L  +++ 
Sbjct: 144 RGTIDAASVYPRELVSLVLEKRAAAVIVCHNHPSGVAEPSQADRRITERLKNALATIDVS 203

Query: 77  VHDHIIIGKDAFVSF 91
           + DH+++G    VSF
Sbjct: 204 LLDHMVVGDREIVSF 218


>gi|161523974|ref|YP_001578986.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616]
 gi|189351265|ref|YP_001946893.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616]
 gi|160341403|gb|ABX14489.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616]
 gi|189335287|dbj|BAG44357.1| DNA repair protein [Burkholderia multivorans ATCC 17616]
          Length = 256

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+  + ++A ++I+ HNHPSG   PS  D 
Sbjct: 160 LYLDARHGLIDMEENTRGSLTRMAVYPREIVRSAMRMNAAALIVAHNHPSGAVQPSAEDR 219

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH+++GK    SF
Sbjct: 220 RLTRTLRDALALVDVRLLDHVVVGKADTFSF 250


>gi|13471142|ref|NP_102711.1| DNA repair protein [Mesorhizobium loti MAFF303099]
 gi|14021886|dbj|BAB48497.1| probable DNA repair protein [Mesorhizobium loti MAFF303099]
          Length = 66

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 38/54 (70%)

Query: 44 LVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          L+HNHPSG+P PS ADI MT+ II     L I VHDHIIIG+  + S KGL +I
Sbjct: 13 LMHNHPSGDPTPSRADIEMTKEIIEAGKRLGIAVHDHIIIGRKGYASMKGLLLI 66


>gi|218131967|ref|ZP_03460771.1| hypothetical protein BACEGG_03590 [Bacteroides eggerthii DSM 20697]
 gi|217985843|gb|EEC52183.1| hypothetical protein BACEGG_03590 [Bacteroides eggerthii DSM 20697]
          Length = 241

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 45/76 (59%)

Query: 16  SRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNI 75
           SRG ID     +R +++  L   AT I LVHNHPSGNP+PSD D  +TQ I      +NI
Sbjct: 160 SRGGIDQTSADVRSVLREALLQRATQIALVHNHPSGNPHPSDDDRRLTQLIQKGAQTMNI 219

Query: 76  IVHDHIIIGKDAFVSF 91
            + DH+II    + SF
Sbjct: 220 RMIDHVIITDGLYYSF 235


>gi|317474431|ref|ZP_07933705.1| DNA repair protein RadC [Bacteroides eggerthii 1_2_48FAA]
 gi|316909112|gb|EFV30792.1| DNA repair protein RadC [Bacteroides eggerthii 1_2_48FAA]
          Length = 241

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 45/76 (59%)

Query: 16  SRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNI 75
           SRG ID     +R +++  L   AT I LVHNHPSGNP+PSD D  +TQ I      +NI
Sbjct: 160 SRGGIDQTSADVRSVLREALLQRATQIALVHNHPSGNPHPSDDDRRLTQLIQKGAQTMNI 219

Query: 76  IVHDHIIIGKDAFVSF 91
            + DH+II    + SF
Sbjct: 220 RMIDHVIITDGLYYSF 235


>gi|226940826|ref|YP_002795900.1| RadC [Laribacter hongkongensis HLHK9]
 gi|254789654|sp|C1D8V1|Y1907_LARHH RecName: Full=UPF0758 protein LHK_01907
 gi|226715753|gb|ACO74891.1| RadC [Laribacter hongkongensis HLHK9]
          Length = 226

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+A E  + GT+    VY RE+V+  L   A ++IL HNHPSG+  PS AD 
Sbjct: 128 LCLDARNRLLAVEEVAHGTLTESRVYPREVVKAALRQHAVAVILAHNHPSGDSGPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH++I +    SF
Sbjct: 188 ELTEALGRALALVDVRLLDHLVISRQGCTSF 218


>gi|253702454|ref|YP_003023643.1| DNA repair protein RadC [Geobacter sp. M21]
 gi|251777304|gb|ACT19885.1| DNA repair protein RadC [Geobacter sp. M21]
          Length = 231

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I+    S G+++   V+ RE+    +  SA ++IL+HNHP+G+P PS  D+
Sbjct: 135 LLLDGKNRIISRAQISEGSLNQSIVHPREVFNVAVRNSAAAMILLHNHPTGDPAPSPEDM 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +      L I V DHIIIG++ F SF
Sbjct: 195 EVTRRLCEAGQLLGIRVLDHIIIGENEFYSF 225


>gi|186894518|ref|YP_001871630.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+]
 gi|186697544|gb|ACC88173.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+]
          Length = 156

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + L+  E+   GT+ H  V+ RE+V+  L+ +A ++IL HNHPSG    S  D 
Sbjct: 61  MYLDNQHCLLESEILFTGTLSHTEVHPREVVKLALKHNAAAVILAHNHPSGTTEISQQDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++TQ I+  L  + I V DH+++G +  VSF
Sbjct: 121 HITQRIVKALALMQIRVLDHLVVG-NGVVSF 150


>gi|260584697|ref|ZP_05852443.1| DNA repair protein RadC [Granulicatella elegans ATCC 700633]
 gi|260157720|gb|EEW92790.1| DNA repair protein RadC [Granulicatella elegans ATCC 700633]
          Length = 228

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  ++  RG ++   V+ REI +  +  SA  II+ HNHPSGN  PS ADI
Sbjct: 132 LFLNSKNEVIKKKIIFRGGLNQAVVHPREIFREAVRFSAARIIIGHNHPSGNVTPSQADI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + T+ +      + I + DH I+G   + S K
Sbjct: 192 DFTRRLSECGEMMGIELLDHFIVGDHTYCSLK 223


>gi|24375732|ref|NP_719775.1| DNA repair protein RadC [Shewanella oneidensis MR-1]
 gi|38372485|sp|Q8E9M2|Y4248_SHEON RecName: Full=UPF0758 protein SO_4248
 gi|24350669|gb|AAN57219.1|AE015857_12 DNA repair protein RadC [Shewanella oneidensis MR-1]
          Length = 225

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH+++G    VSF
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSF 218


>gi|113971925|ref|YP_735718.1| DNA repair protein RadC [Shewanella sp. MR-4]
 gi|123324586|sp|Q0HE56|Y3597_SHESM RecName: Full=UPF0758 protein Shewmr4_3597
 gi|113886609|gb|ABI40661.1| DNA repair protein RadC [Shewanella sp. MR-4]
          Length = 225

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH+++G    VSF
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSF 218


>gi|315641420|ref|ZP_07896493.1| DNA repair protein RadC [Enterococcus italicus DSM 15952]
 gi|315482807|gb|EFU73330.1| DNA repair protein RadC [Enterococcus italicus DSM 15952]
          Length = 226

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  E    G+++    + REI +  + +SA  IIL HNHPSGNP PS  D+
Sbjct: 129 LYLNTKNEIIKKETLFIGSLNQSVAHPREIFKGAVRVSAARIILTHNHPSGNPKPSSHDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ +      + I V DH+IIG   +VS +
Sbjct: 189 QFTKRVKECGEMMGIEVLDHLIIGTRRYVSLR 220


>gi|52081286|ref|YP_080077.1| DNA repair protein RadC [Bacillus licheniformis ATCC 14580]
 gi|52786665|ref|YP_092494.1| DNA repair protein RadC [Bacillus licheniformis ATCC 14580]
 gi|81690952|sp|Q65GL3|Y2933_BACLD RecName: Full=UPF0758 protein BLi02933/BL00636
 gi|52004497|gb|AAU24439.1| DNA repair protein [Bacillus licheniformis ATCC 14580]
 gi|52349167|gb|AAU41801.1| RadC [Bacillus licheniformis ATCC 14580]
          Length = 224

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 47/75 (62%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           G+++   V+ RE+ +  L+ SA S I VHNHPSG+P PS  DI +TQ +  +   L I +
Sbjct: 145 GSLNSSIVHPREVFKEALKRSAASFICVHNHPSGDPAPSREDIEVTQRLHESGQLLGIEL 204

Query: 78  HDHIIIGKDAFVSFK 92
            DHIIIG   FVS K
Sbjct: 205 LDHIIIGDQKFVSLK 219


>gi|302386425|ref|YP_003822247.1| DNA repair protein RadC [Clostridium saccharolyticum WM1]
 gi|302197053|gb|ADL04624.1| DNA repair protein RadC [Clostridium saccharolyticum WM1]
          Length = 231

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 57/91 (62%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L+    LI D + S+GT++   V  REI    ++  A S++LVHNHPSG+P+PS  D++
Sbjct: 136 LLNTKGSLIRDIMISQGTVNASAVSPREIFIEAMKYHAVSLVLVHNHPSGDPSPSREDLS 195

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            T+ +    + + I + DHIIIG ++++S K
Sbjct: 196 FTRRVKEAGDLVGIRLLDHIIIGDNSYISLK 226


>gi|146295826|ref|YP_001179597.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145409402|gb|ABP66406.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 230

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 46/74 (62%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GT+    VY R++V+  L  +A+S+IL HNHP G+  PS  DI  TQ I+  L+ + + V
Sbjct: 146 GTVKEAVVYPRKVVECVLRYNASSVILAHNHPGGSVKPSMDDIKTTQKIVNALSTIGVAV 205

Query: 78  HDHIIIGKDAFVSF 91
           +DH I+ K  + SF
Sbjct: 206 NDHFIVAKGEYYSF 219


>gi|114045869|ref|YP_736419.1| DNA repair protein RadC [Shewanella sp. MR-7]
 gi|117922202|ref|YP_871394.1| DNA repair protein RadC [Shewanella sp. ANA-3]
 gi|123030985|sp|Q0HZU3|Y359_SHESR RecName: Full=UPF0758 protein Shewmr7_0359
 gi|166218796|sp|A0L1R9|Y3770_SHESA RecName: Full=UPF0758 protein Shewana3_3770
 gi|113887311|gb|ABI41362.1| DNA repair protein RadC [Shewanella sp. MR-7]
 gi|117614534|gb|ABK49988.1| DNA repair protein RadC [Shewanella sp. ANA-3]
          Length = 225

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH+++G    VSF
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSF 218


>gi|312621801|ref|YP_004023414.1| DNA repair protein radc [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202268|gb|ADQ45595.1| DNA repair protein RadC [Caldicellulosiruptor kronotskyensis 2002]
          Length = 163

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 50/82 (60%)

Query: 16  SRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNI 75
           SRGT++  P   REI +R L  +  SII+ HNHP G+  PS  DI+ T+ I      L+I
Sbjct: 82  SRGTLNFAPANTREIFKRVLLTNCHSIIIAHNHPGGSAKPSMDDIDTTKKIKEAAQLLDI 141

Query: 76  IVHDHIIIGKDAFVSFKGLRII 97
            ++DHIII +D++ SF    I+
Sbjct: 142 RLNDHIIIAEDSYYSFSQAGIL 163


>gi|297587677|ref|ZP_06946321.1| DNA repair protein RadC [Finegoldia magna ATCC 53516]
 gi|297574366|gb|EFH93086.1| DNA repair protein RadC [Finegoldia magna ATCC 53516]
          Length = 223

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 1/95 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I+ E+ S+GTI+   V+ RE+ +  ++  A SIILVHNHPSG+  PS+ADI
Sbjct: 127 LLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNADI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGL 94
            +T+ +    + + I V DHII+   D+    KG+
Sbjct: 187 EVTKRLDKVGDLVGIQVLDHIIVSSSDSLSMRKGM 221


>gi|288575704|ref|ZP_05977454.2| DNA repair protein RadC [Neisseria mucosa ATCC 25996]
 gi|288567139|gb|EFC88699.1| DNA repair protein RadC [Neisseria mucosa ATCC 25996]
          Length = 232

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+I+ HNHP G+  PS +DI
Sbjct: 134 LLLNRQNRLIAMRELSRGTVAENTVYIREIVKLALDEYADSLIIAHNHPGGSATPSQSDI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T  +   L  +++ + DH I+      S +
Sbjct: 194 AFTGRLKQALALVDVSLLDHFIVTATEVCSMR 225


>gi|317407831|gb|EFV87757.1| hypothetical protein HMPREF0005_03171 [Achromobacter xylosoxidans
           C54]
          Length = 165

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 52/84 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    +IA E   RGT+    VY RE+V+  +  +A SI++ HNHPSG+  PS AD+
Sbjct: 69  MFLDAQLRMIAFEEMFRGTLSETSVYPREVVKAAIRHNAHSILIAHNHPSGSSQPSKADV 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
            +T+ +   +  +N+ + DH+I+ 
Sbjct: 129 EVTRRLKEAVALVNVTLVDHVIVA 152


>gi|126172629|ref|YP_001048778.1| DNA repair protein RadC [Shewanella baltica OS155]
 gi|160873513|ref|YP_001552829.1| DNA repair protein RadC [Shewanella baltica OS195]
 gi|217971608|ref|YP_002356359.1| DNA repair protein RadC [Shewanella baltica OS223]
 gi|304411668|ref|ZP_07393280.1| DNA repair protein RadC [Shewanella baltica OS183]
 gi|307306280|ref|ZP_07586025.1| DNA repair protein RadC [Shewanella baltica BA175]
 gi|166218793|sp|A3CZJ6|Y377_SHEB5 RecName: Full=UPF0758 protein Sbal_0377
 gi|189029402|sp|A9KY04|Y388_SHEB9 RecName: Full=UPF0758 protein Sbal195_0388
 gi|254789658|sp|B8E4J5|Y402_SHEB2 RecName: Full=UPF0758 protein Sbal223_0402
 gi|125995834|gb|ABN59909.1| DNA repair protein RadC [Shewanella baltica OS155]
 gi|160859035|gb|ABX47569.1| DNA repair protein RadC [Shewanella baltica OS195]
 gi|217496743|gb|ACK44936.1| DNA repair protein RadC [Shewanella baltica OS223]
 gi|304349856|gb|EFM14262.1| DNA repair protein RadC [Shewanella baltica OS183]
 gi|306911153|gb|EFN41580.1| DNA repair protein RadC [Shewanella baltica BA175]
 gi|315265742|gb|ADT92595.1| DNA repair protein RadC [Shewanella baltica OS678]
          Length = 225

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH+++G    VSF
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSF 218


>gi|120597169|ref|YP_961743.1| DNA repair protein RadC [Shewanella sp. W3-18-1]
 gi|146291569|ref|YP_001181993.1| DNA repair protein RadC [Shewanella putrefaciens CN-32]
 gi|166218795|sp|A4Y2L1|Y462_SHEPC RecName: Full=UPF0758 protein Sputcn32_0462
 gi|166218797|sp|A1REU4|Y338_SHESW RecName: Full=UPF0758 protein Sputw3181_0338
 gi|120557262|gb|ABM23189.1| DNA repair protein RadC [Shewanella sp. W3-18-1]
 gi|145563259|gb|ABP74194.1| DNA repair protein RadC [Shewanella putrefaciens CN-32]
 gi|319424742|gb|ADV52816.1| DNA repair protein RadC [Shewanella putrefaciens 200]
          Length = 225

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH+++G    VSF
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSF 218


>gi|118580303|ref|YP_901553.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
 gi|118503013|gb|ABK99495.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
          Length = 166

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++  +  S G+++   V +RE+++  L  SA +I+LVHNHPSG+P PS  DI
Sbjct: 70  LHLDGKNRIVCLDRVSVGSLNQSIVNVREVLKSALLSSAAAILLVHNHPSGDPTPSGEDI 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +  +   + I V DHIIIG   +VSF  +GL
Sbjct: 130 AITRRLKESGELICIPVLDHIIIGDGQYVSFVERGL 165


>gi|85710819|ref|ZP_01041880.1| RadC [Idiomarina baltica OS145]
 gi|85695223|gb|EAQ33160.1| RadC [Idiomarina baltica OS145]
          Length = 260

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + L+  E    GTI+  PVY RE+++  ++ +A ++IL HNHPSG   PS AD 
Sbjct: 164 LLLDSQHRLLRYEELFYGTINAAPVYPREVLKLVMQHNAAAVILAHNHPSGVAEPSQADK 223

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L  +++ + DH +IG    VSF  +GL
Sbjct: 224 RVTERLQKALALVDVALLDHFVIGSGDPVSFAERGL 259


>gi|193212294|ref|YP_001998247.1| DNA repair protein RadC [Chlorobaculum parvum NCIB 8327]
 gi|229485546|sp|B3QM94|Y627_CHLP8 RecName: Full=UPF0758 protein Cpar_0627
 gi|193085771|gb|ACF11047.1| DNA repair protein RadC [Chlorobaculum parvum NCIB 8327]
          Length = 222

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +++ E  + GT+    ++ REI +  +  SA SIILVHNHPSG+  PS+AD 
Sbjct: 126 LFLNTKNRILSHESVTVGTLTSSLIHPREIFKAAIRQSAHSIILVHNHPSGDVQPSNADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T  +  + + L I + DH+I+G D + SF+
Sbjct: 186 QVTSILKKSGDLLQIALLDHVIVGNDDWFSFR 217


>gi|167745627|ref|ZP_02417754.1| hypothetical protein ANACAC_00319 [Anaerostipes caccae DSM 14662]
 gi|317472772|ref|ZP_07932083.1| DNA repair protein RadC [Anaerostipes sp. 3_2_56FAA]
 gi|167654939|gb|EDR99068.1| hypothetical protein ANACAC_00319 [Anaerostipes caccae DSM 14662]
 gi|316899691|gb|EFV21694.1| DNA repair protein RadC [Anaerostipes sp. 3_2_56FAA]
          Length = 232

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +  +  N +I +   S GT++      RE+    L+  A  +IL+HNHPSG+P PS  D+
Sbjct: 136 ILFNGKNKVIKELKVSVGTVNQTVASPREVFLEALKYEAVYLILLHNHPSGDPTPSRQDV 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ I      L I + DHIIIG  ++VSFK
Sbjct: 196 SVTKRIKEAGELLGIYLSDHIIIGDRSYVSFK 227


>gi|302381094|ref|ZP_07269554.1| putative DNA repair protein RadC [Finegoldia magna ACS-171-V-Col3]
 gi|303235301|ref|ZP_07321919.1| putative DNA repair protein RadC [Finegoldia magna BVS033A4]
 gi|302311141|gb|EFK93162.1| putative DNA repair protein RadC [Finegoldia magna ACS-171-V-Col3]
 gi|302493615|gb|EFL53403.1| putative DNA repair protein RadC [Finegoldia magna BVS033A4]
          Length = 223

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 1/95 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I+ E+ S+GTI+   V+ RE+ +  ++  A SIILVHNHPSG+  PS+ADI
Sbjct: 127 LLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNADI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGL 94
            +T+ +    + + I V DHII+   D+    KG+
Sbjct: 187 EVTKRLDKVGDLVGIQVLDHIIVSSNDSLSMRKGM 221


>gi|268318025|ref|YP_003291744.1| DNA repair protein RadC [Rhodothermus marinus DSM 4252]
 gi|262335559|gb|ACY49356.1| DNA repair protein RadC [Rhodothermus marinus DSM 4252]
          Length = 245

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IAD   S G +    V  R + QR +  +A  II +HNHPSGNP PS  DI
Sbjct: 148 VLLNTANYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSGNPEPSAEDI 207

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ ++     L I VHDHIII    + S   +GL
Sbjct: 208 RITRQLVEAGRLLGIPVHDHIIIAGTTYTSLAERGL 243


>gi|169824054|ref|YP_001691665.1| DNA repair protein RadC [Finegoldia magna ATCC 29328]
 gi|254789652|sp|B0S3Y4|Y357_FINM2 RecName: Full=UPF0758 protein FMG_0357
 gi|167830859|dbj|BAG07775.1| DNA repair protein RadC [Finegoldia magna ATCC 29328]
          Length = 223

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 1/95 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I+ E+ S+GTI+   V+ RE+ +  ++  A SIILVHNHPSG+  PS+ADI
Sbjct: 127 LLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNADI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGL 94
            +T+ +    + + I V DHII+   D+    KG+
Sbjct: 187 EVTKRLDKVGDLVGIQVLDHIIVSSNDSLSMRKGM 221


>gi|148826397|ref|YP_001291150.1| DNA repair protein RadC [Haemophilus influenzae PittEE]
 gi|148716557|gb|ABQ98767.1| DNA repair protein RadC [Haemophilus influenzae PittEE]
          Length = 214

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 118 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPSYSDQ 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I V DH+I+GK    SF
Sbjct: 178 LITKKIQDAAELMEICVLDHLIVGKSDCYSF 208


>gi|330957298|gb|EGH57558.1| hypothetical protein PMA4326_01827 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 224

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDSKHRAMTFEILFRGTINAAYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           ++T+ +   L  +++ V DH+IIG    +S   KGL
Sbjct: 188 DLTKRLKEALLLVDVQVLDHVIIGDGEPLSMVEKGL 223


>gi|33152085|ref|NP_873438.1| DNA repair protein [Haemophilus ducreyi 35000HP]
 gi|33148307|gb|AAP95827.1| conserved possible DNA repair protein [Haemophilus ducreyi 35000HP]
          Length = 157

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF D  N LI  E    GTI+   ++ REIV++ LEL+++++IL HNHPSG   PS +D 
Sbjct: 61  LFWDTQNRLIRFEKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             T  I      +++ V DHII+      SF
Sbjct: 121 QTTAKIKQACQLIDVNVLDHIIVSATDTYSF 151


>gi|325267779|ref|ZP_08134429.1| DNA repair protein RadC [Kingella denitrificans ATCC 33394]
 gi|324980660|gb|EGC16322.1| DNA repair protein RadC [Kingella denitrificans ATCC 33394]
          Length = 237

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    LIA E  SRGT+    +Y+RE+ +R L   A S++L HNHPSG+  PS  D 
Sbjct: 140 LFLDAQQRLIACEELSRGTVAENALYVREVAKRALHHHAVSVLLAHNHPSGDVQPSAEDC 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             T+ +   L  L+I + DHII+      SF
Sbjct: 200 AATERLQAALQLLDIQLLDHIIVAAQDTFSF 230


>gi|297537568|ref|YP_003673337.1| DNA repair protein RadC [Methylotenera sp. 301]
 gi|297256915|gb|ADI28760.1| DNA repair protein RadC [Methylotenera sp. 301]
          Length = 224

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N ++  E    GT+    VY RE+V+R L  +A S+I  HNHPSG    S AD 
Sbjct: 128 LFLDAQNRVVTTEEMFSGTLTQTSVYPREVVKRALHHNAASVIFAHNHPSGLAQQSQADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +   L  +++ V DH I+  +  +SF  +GL
Sbjct: 188 LITKQLKEALALVDVRVLDHFIVAGNTTLSFVERGL 223


>gi|172048112|sp|A5UDB6|Y7200_HAEIE RecName: Full=UPF0758 protein CGSHiEE_07200
          Length = 221

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPSYSDQ 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I V DH+I+GK    SF
Sbjct: 185 LITKKIQDAAELMEICVLDHLIVGKSDCYSF 215


>gi|84387383|ref|ZP_00990403.1| DNA repair protein [Vibrio splendidus 12B01]
 gi|84377832|gb|EAP94695.1| DNA repair protein [Vibrio splendidus 12B01]
          Length = 156

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 52/85 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + LI  E   +GTID   VY RE+V+  L+ +A ++I  HNHPSG+  PS AD 
Sbjct: 61  MLLDNQHRLIEFEELFQGTIDAASVYPREVVKTALKANAAAVIFAHNHPSGDSAPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK 85
            +T  +   L  +++ V DHI++G+
Sbjct: 121 RITTRLQDALALIDVRVLDHIVVGE 145


>gi|150015380|ref|YP_001307634.1| DNA repair protein RadC [Clostridium beijerinckii NCIMB 8052]
 gi|189029392|sp|A6LQP8|Y490_CLOB8 RecName: Full=UPF0758 protein Cbei_0490
 gi|149901845|gb|ABR32678.1| DNA repair protein RadC [Clostridium beijerinckii NCIMB 8052]
          Length = 229

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  NI++  +   +G+++   V+ REI ++ +  ++ SII+ HNHPSG+P PS  DI
Sbjct: 133 VLLNTKNIVVGIKDVFKGSLNTSVVHPREIFKQAISKNSASIIICHNHPSGDPTPSREDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           N+T  I    N + I + DHIIIG + FVS K
Sbjct: 193 NITLRIKECGNIIGIQLVDHIIIGNNKFVSLK 224


>gi|303241410|ref|ZP_07327913.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2]
 gi|302591019|gb|EFL60764.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2]
          Length = 178

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 55/91 (60%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FLDK N +I  +V S G+I    VY R +++  L+    S+I+ HNHP G+  PS  D  
Sbjct: 30  FLDKGNNVIETKVLSEGSIGEAVVYPRAVLKAALDCDCKSMIVAHNHPGGSMVPSLQDKE 89

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +TQ +++   PL I V DHII+  ++++S +
Sbjct: 90  ITQILVSIFTPLQINVLDHIIVANNSYLSME 120


>gi|319785772|ref|YP_004145247.1| DNA repair protein RadC [Pseudoxanthomonas suwonensis 11-1]
 gi|317464284|gb|ADV26016.1| DNA repair protein RadC [Pseudoxanthomonas suwonensis 11-1]
          Length = 224

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E    GTID   V+ RE+V+R L  +A ++I+ HNHPSG+P+PS AD 
Sbjct: 128 LFLDNRHRALAFEELFNGTIDGAEVHPREVVRRALAHNAAAVIVGHNHPSGSPDPSAADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  +   L  + + + DH ++G    VS   +GL
Sbjct: 188 AVTARLKQALALVEVRLLDHFVVGDGEPVSMAARGL 223


>gi|331683685|ref|ZP_08384281.1| DNA repair protein, RADC family [Escherichia coli H299]
 gi|331078637|gb|EGI49839.1| DNA repair protein, RADC family [Escherichia coli H299]
          Length = 90

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 52/83 (62%)

Query: 9  LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68
          LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD  +T+ ++ 
Sbjct: 2  LIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQ 61

Query: 69 TLNPLNIIVHDHIIIGKDAFVSF 91
           L  ++I V DH+I+G +   SF
Sbjct: 62 ALGLVDIRVPDHLIVGGNQVFSF 84


>gi|156936681|ref|YP_001436032.1| DNA repair protein RadC [Vibrio harveyi ATCC BAA-1116]
 gi|156529928|gb|ABU75012.1| hypothetical protein VIBHAR_p08165 [Vibrio harveyi ATCC BAA-1116]
          Length = 305

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/91 (36%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + + + E    GT++   VY RE+V++ L  +A+++I  HNHPSG   PS AD 
Sbjct: 209 IFLDNQHRVRSSEDLFTGTVNAASVYPREVVKKALAENASAVIFYHNHPSGVAEPSQADR 268

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I  L  +++ V DH ++  +  VSF
Sbjct: 269 RITRRLIDALALIDVKVLDHFVVSFEGTVSF 299


>gi|320546653|ref|ZP_08040965.1| DNA repair protein RadC [Streptococcus equinus ATCC 9812]
 gi|320448708|gb|EFW89439.1| DNA repair protein RadC [Streptococcus equinus ATCC 9812]
          Length = 226

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I       G++       REI+    +  ATS+I+VHNHPSG+P PS+ D+
Sbjct: 129 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ I  +   + +I  DHII+GK  + SF+
Sbjct: 189 RFTEKIKRSCEDIGLICLDHIIVGKYQYYSFR 220


>gi|319654115|ref|ZP_08008205.1| hypothetical protein HMPREF1013_04825 [Bacillus sp. 2_A_57_CT2]
 gi|317394200|gb|EFV74948.1| hypothetical protein HMPREF1013_04825 [Bacillus sp. 2_A_57_CT2]
          Length = 232

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 54/92 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N++I  +    G ++   V+ REI    ++ ++ SII+ H+HPSG+P PS  DI
Sbjct: 136 LFLNSKNVVIGKKTIFVGELNSCNVHPREIFHEAIQRTSASIIVAHSHPSGDPTPSREDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            MT+ +      + I V DH+IIG   ++S K
Sbjct: 196 EMTKRLREAGELIGIPVLDHVIIGNGRYISLK 227


>gi|54298489|ref|YP_124858.1| DNA repair protein RadC [Legionella pneumophila str. Paris]
 gi|81369883|sp|Q5X240|Y2553_LEGPA RecName: Full=UPF0758 protein lpp2553
 gi|53752274|emb|CAH13706.1| DNA repair protein RadC [Legionella pneumophila str. Paris]
          Length = 227

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 56/90 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E    GTI+   VY R IV+R L+L+A ++IL HNHPSG  + S  D+
Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
            +T+ I   L+ ++  + DHI+IG +   S
Sbjct: 188 AITERIRDALDLVDARLLDHIVIGDNEVYS 217


>gi|172044490|sp|A4STD5|Y4229_AERS4 RecName: Full=UPF0758 protein ASA_4229
          Length = 220

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 47/74 (63%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GT+D   V+ REIVQ  L+ +A ++IL HNHPSG   PS AD  +T  I+  L  ++I V
Sbjct: 141 GTLDSASVWPREIVQIALKHNAAAVILAHNHPSGVAEPSRADRQITDRILAALALIDIRV 200

Query: 78  HDHIIIGKDAFVSF 91
            DH++IG    VSF
Sbjct: 201 LDHLVIGDGITVSF 214


>gi|54295324|ref|YP_127739.1| DNA repair protein RadC [Legionella pneumophila str. Lens]
 gi|81368019|sp|Q5WTW4|Y2409_LEGPL RecName: Full=UPF0758 protein lpl2409
 gi|53755156|emb|CAH16649.1| DNA repair protein RadC [Legionella pneumophila str. Lens]
          Length = 227

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 56/90 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E    GTI+   VY R IV+R L+L+A ++IL HNHPSG  + S  D+
Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
            +T+ I   L+ ++  + DHI+IG +   S
Sbjct: 188 AITERIRDALDLVDARLLDHIVIGDNEVYS 217


>gi|225847877|ref|YP_002728040.1| DNA repair protein RadC [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643861|gb|ACN98911.1| DNA repair protein RadC [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 229

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N LIA EV ++G+++ V V  R+I+   L+ +   II+ HNHP+G+  PS+ DI
Sbjct: 133 IYLNSSNELIAKEVIAKGSLNVVRVLPRDILYYGLKHNCNGIIIAHNHPNGSSKPSEEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           N T+ +      +   + DHII+GK+ + SF  KGL
Sbjct: 193 NFTKKLSQLALEMGFELLDHIIVGKNDYFSFAEKGL 228


>gi|229589475|ref|YP_002871594.1| putative DNA repair protein [Pseudomonas fluorescens SBW25]
 gi|229361341|emb|CAY48211.1| putative DNA repair protein [Pseudomonas fluorescens SBW25]
          Length = 164

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A EV   G+ID   VY R++V+R L  +A + I VHNHPSG   PS AD 
Sbjct: 68  IFLDAQHRVLAFEVLFHGSIDGASVYPRQVVKRSLAHNAAAAIFVHNHPSGCTEPSQADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK 85
            +T  +   L  + + V DH I+G+
Sbjct: 128 VLTARLKEALALIEVRVMDHFIVGE 152


>gi|52842697|ref|YP_096496.1| DNA repair protein RadC [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|81376830|sp|Q5ZSM8|Y2489_LEGPH RecName: Full=UPF0758 protein lpg2489
 gi|52629808|gb|AAU28549.1| DNA repair protein RadC [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 227

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 56/90 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E    GTI+   VY R IV+R L+L+A ++IL HNHPSG  + S  D+
Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
            +T+ I   L+ ++  + DHI+IG +   S
Sbjct: 188 AITERIRDALDLVDARLLDHIVIGDNEVYS 217


>gi|238761834|ref|ZP_04622808.1| DNA repair protein RadC [Yersinia kristensenii ATCC 33638]
 gi|238699948|gb|EEP92691.1| DNA repair protein RadC [Yersinia kristensenii ATCC 33638]
          Length = 161

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+A E    GTI+   V+ RE+V+  ++ +A S +L HNHPS    PS AD 
Sbjct: 63  LWLDNQNRLLAQETLFTGTINSTTVHPRELVKSAMKHNAASAVLAHNHPSQLAEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  ++  L  +++ V DH+++G    VSF
Sbjct: 123 QITDRLVNALGLVDVRVLDHLVVGGLDIVSF 153


>gi|330876490|gb|EGH10639.1| hypothetical protein PSYMP_14329 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 224

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R L  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRALAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           ++T+ +   L  +++ V DH+I+G    +S   KGL
Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVEKGL 223


>gi|327484356|gb|AEA78763.1| DNA repair protein RadC [Vibrio cholerae LMA3894-4]
          Length = 138

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 49/76 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNII 76
            +TQ +   L+ ++I+
Sbjct: 123 RITQRLKDALSLVDIL 138


>gi|260363782|ref|ZP_05776542.1| DNA repair protein RadC [Vibrio parahaemolyticus K5030]
 gi|308113336|gb|EFO50876.1| DNA repair protein RadC [Vibrio parahaemolyticus K5030]
          Length = 203

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 48/75 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNI 75
            +T+ +I  L  ++I
Sbjct: 188 RITRRLIDALALVDI 202


>gi|330964261|gb|EGH64521.1| hypothetical protein PSYAC_06345 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 224

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R L  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRALAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
           ++T+ +   L  +++ V DH+I+G    +S   KGL
Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVEKGL 223


>gi|254523925|ref|ZP_05135980.1| DNA repair protein RadC [Stenotrophomonas sp. SKA14]
 gi|219721516|gb|EED40041.1| DNA repair protein RadC [Stenotrophomonas sp. SKA14]
          Length = 110

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F++  + ++A E    GTI+   VY R ++QR L+L+A ++I  H HPSG   PS+AD 
Sbjct: 14  VFMNSMHDVLAVEPMFHGTINATSVYPRVVLQRALQLNAAAVIFAHQHPSGTTEPSNADR 73

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ + T L  +++ V DH +IG+    SF 
Sbjct: 74  LLTEQLKTALALIDVRVLDHFVIGQGTPYSFA 105


>gi|307611348|emb|CBX01009.1| DNA repair protein RadC [Legionella pneumophila 130b]
          Length = 227

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 56/90 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E    GTI+   VY R IV+R L+L+A ++IL HNHPSG  + S  D+
Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
            +T+ I   L+ ++  + DHI+IG +   S
Sbjct: 188 AITKRIRDALDLVDARLLDHIVIGDNEVYS 217


>gi|121999079|ref|YP_001003866.1| DNA repair protein RadC [Halorhodospira halophila SL1]
 gi|166218781|sp|A1WZF2|Y2301_HALHL RecName: Full=UPF0758 protein Hhal_2301
 gi|121590484|gb|ABM63064.1| DNA replication and repair protein RadC [Halorhodospira halophila
           SL1]
          Length = 224

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   RGTI+   VY RE+V+R L  +A ++I+ HNHPSG   PS AD 
Sbjct: 128 LFLDNRHRVIGFEELFRGTINGASVYPRELVRRALAHNAAAVIVAHNHPSGITEPSAADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  +++ + DH ++G    VS 
Sbjct: 188 ALTHRLREALGLVDVRLLDHFVVGDGEPVSL 218


>gi|332040187|gb|EGI76568.1| hypothetical protein HGR_10625 [Hylemonella gracilis ATCC 19624]
          Length = 223

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + L+A E   RGT+    VY RE+V R L   A +++L HNHPSG+ +PS AD 
Sbjct: 127 LMLDSQHRLLALEELFRGTLAQTSVYPREVVLRALHHHAAAVVLAHNHPSGSVSPSRADE 186

Query: 61  NMTQNIITTLNPLNIIVHDHIII--GKDAFVSFKGL 94
            +T+++ + L  +++ V DH+I+  G+   ++ +GL
Sbjct: 187 LLTRSLQSALALVDVRVLDHVIVAPGQALSMAERGL 222


>gi|295135718|ref|YP_003586394.1| DNA repair protein RadC [Zunongwangia profunda SM-A87]
 gi|294983733|gb|ADF54198.1| DNA repair protein RadC [Zunongwangia profunda SM-A87]
          Length = 232

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 2/92 (2%)

Query: 1   LFLDKHNILIADEVQ-SRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           ++L+  N +I D++Q S+G I    V +R  +++ LEL A +IIL HNHPSG   PS AD
Sbjct: 136 IYLNNSNKVI-DKLQLSKGGITGTLVDVRLTMKKALELGAVAIILAHNHPSGTLKPSIAD 194

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            N+TQ +      L+I V DHII+ + ++ SF
Sbjct: 195 KNLTQKLKIASESLDIKVLDHIIVTEMSYFSF 226


>gi|218709645|ref|YP_002417266.1| putative DNA repair protein; prophage protein [Vibrio splendidus
           LGP32]
 gi|218322664|emb|CAV18840.1| putative DNA repair protein; prophage protein [Vibrio splendidus
           LGP32]
          Length = 156

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 52/85 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + LI  E   +GTID   VY RE+V+  L+ +A ++I  HNHPSG+  PS AD 
Sbjct: 61  MLLDNQHRLIEFEELFQGTIDAASVYPREVVKTALKANAAAVIFAHNHPSGDSAPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK 85
            +T  +   L  +++ V DH+++G+
Sbjct: 121 RITTRLQDALALIDVRVLDHVVVGE 145


>gi|37524159|ref|NP_927503.1| hypothetical protein plu0133 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36783582|emb|CAE12428.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 157

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    GTI H   + REIV+  L  +A ++IL HNHPSG  + S AD 
Sbjct: 61  LYLDNQHRLLEHETLFLGTISHTEAHPREIVKSALRHNAAAVILAHNHPSGITDASKADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  I+ TLN + + V  H IIG    +SF
Sbjct: 121 TITDRIVNTLNLVEVRVLGHFIIGDGNTLSF 151


>gi|145301518|ref|YP_001144357.1| DNA repair protein [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142856400|gb|ABO92609.1| DNA repair protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 296

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/91 (39%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + +I     S GTID   VY RE+V+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 67  ILLDNQHRVINAVDLSHGTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L+ ++I V DHI++  +  +SF
Sbjct: 127 QITERLQAALDLVDIRVLDHIVVAGENSMSF 157


>gi|330895709|gb|EGH27999.1| hypothetical protein PSYJA_02849 [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 111

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 8   LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 67

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ +   L  +++ V DH+I+G        G R+
Sbjct: 68  DLTKRLKEALMLVDVHVLDHVIVGDGGATVDGGARV 103


>gi|218282132|ref|ZP_03488431.1| hypothetical protein EUBIFOR_01006 [Eubacterium biforme DSM 3989]
 gi|218216925|gb|EEC90463.1| hypothetical protein EUBIFOR_01006 [Eubacterium biforme DSM 3989]
          Length = 224

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI+  V  +GT++   V+ RE+ +     +A S+++ HNHPSG+  PS AD 
Sbjct: 127 LYLDTKSKLISHRVLFKGTLNESVVHPREVFKEAFLQNANSVLIAHNHPSGDCTPSKADF 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T  ++     + + + DHII+ K+ + SFK
Sbjct: 187 EVTYKMVHVAMTMGVCLVDHIIVCKNQYYSFK 218


>gi|167764281|ref|ZP_02436408.1| hypothetical protein BACSTE_02666 [Bacteroides stercoris ATCC
           43183]
 gi|167698397|gb|EDS14976.1| hypothetical protein BACSTE_02666 [Bacteroides stercoris ATCC
           43183]
          Length = 237

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 2/92 (2%)

Query: 1   LFLDKHNILIADEVQ-SRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           L L++ + +I D+V+ SRG ID     +R I++  L   AT I L+HNHPSGNP PS  D
Sbjct: 141 LLLNQASRVI-DKVRISRGGIDQTSADVRSILREALLQRATQIALIHNHPSGNPQPSTND 199

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             +TQ I+     +NI + DH+I+    + SF
Sbjct: 200 RQLTQLILKGAQTMNIRLIDHVIVTDGRYYSF 231


>gi|46907778|ref|YP_014167.1| DNA repair protein RadC [Listeria monocytogenes str. 4b F2365]
 gi|47093084|ref|ZP_00230861.1| DNA repair protein RadC [Listeria monocytogenes str. 4b H7858]
 gi|226224150|ref|YP_002758257.1| DNA repair protein RadC [Listeria monocytogenes Clip81459]
 gi|254824392|ref|ZP_05229393.1| DNA repair protein RadC [Listeria monocytogenes FSL J1-194]
 gi|254852174|ref|ZP_05241522.1| DNA repair protein RadC [Listeria monocytogenes FSL R2-503]
 gi|254992662|ref|ZP_05274852.1| DNA repair protein RadC [Listeria monocytogenes FSL J2-064]
 gi|255522562|ref|ZP_05389799.1| DNA repair protein RadC [Listeria monocytogenes FSL J1-175]
 gi|300764784|ref|ZP_07074774.1| DNA repair protein RadC [Listeria monocytogenes FSL N1-017]
 gi|54036226|sp|Q71ZC0|Y1569_LISMF RecName: Full=UPF0758 protein LMOf2365_1569
 gi|259551878|sp|C1KVJ6|Y1560_LISMC RecName: Full=UPF0758 protein Lm4b_01560
 gi|46881047|gb|AAT04344.1| DNA repair protein RadC [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018524|gb|EAL09280.1| DNA repair protein RadC [Listeria monocytogenes str. 4b H7858]
 gi|225876612|emb|CAS05321.1| Putative DNA repair protein RadC [Listeria monocytogenes serotype
           4b str. CLIP 80459]
 gi|258605477|gb|EEW18085.1| DNA repair protein RadC [Listeria monocytogenes FSL R2-503]
 gi|293593627|gb|EFG01388.1| DNA repair protein RadC [Listeria monocytogenes FSL J1-194]
 gi|300514460|gb|EFK41517.1| DNA repair protein RadC [Listeria monocytogenes FSL N1-017]
 gi|328465585|gb|EGF36814.1| hypothetical protein LM1816_06675 [Listeria monocytogenes 1816]
 gi|328474908|gb|EGF45708.1| hypothetical protein LM220_12012 [Listeria monocytogenes 220]
          Length = 224

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G ++   V+ RE+ +  L  SA SI+  HNHPSG+P PS  D+
Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPTPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    N + I + DHIIIGK+ ++S K
Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLK 219


>gi|160899615|ref|YP_001565197.1| DNA repair protein RadC [Delftia acidovorans SPH-1]
 gi|163858581|ref|YP_001632879.1| DNA repair protein radC-like protein [Bordetella petrii DSM 12804]
 gi|160365199|gb|ABX36812.1| DNA repair protein RadC [Delftia acidovorans SPH-1]
 gi|163262309|emb|CAP44612.1| DNA repair protein radC homolog [Bordetella petrii]
 gi|327479847|gb|AEA83157.1| DNA repair protein RadC [Pseudomonas stutzeri DSM 4166]
          Length = 164

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F++  + ++A E    GTI+   VY R ++QR L+L+A ++I  H HPSG   PS+AD 
Sbjct: 68  VFMNSMHDVLAVEPMFHGTINATSVYPRVVLQRALQLNAAAVIFAHQHPSGTTEPSNADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ + T L  +++ V DH +IG+    SF
Sbjct: 128 LLTEQLKTALALIDVRVLDHFVIGQGTPYSF 158


>gi|325954476|ref|YP_004238136.1| DNA repair protein RadC [Weeksella virosa DSM 16922]
 gi|323437094|gb|ADX67558.1| DNA repair protein RadC [Weeksella virosa DSM 16922]
          Length = 233

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 59/91 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L++ N ++  E  SRG I    V IR + ++ +E  AT++IL HNHPSG+  PS++D+
Sbjct: 137 MYLNQGNAVLKLEQISRGGISQTLVDIRIVFKKGIEQMATAMILAHNHPSGSLKPSESDL 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ +      L+I + DH+I+ + ++ SF
Sbjct: 197 SLTRKLQEAAKVLDINILDHLIVTQTSYFSF 227


>gi|291533850|emb|CBL06963.1| DNA replication and repair protein RadC [Megamonas hypermegale
           ART12/1]
          Length = 229

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +IA    S G+++   V+ RE+ +  +   A+S+ILVHNHPSG+P+PS  DI
Sbjct: 132 LLLDTKNQIIAFPDISIGSLNASIVHPREVFRCAINHFASSMILVHNHPSGDPSPSMEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ +I     L+I + DHII+G + F S K
Sbjct: 192 HITKKLIAGSKILDIEILDHIIVGDNKFTSLK 223


>gi|148360058|ref|YP_001251265.1| DNA repair protein RadC [Legionella pneumophila str. Corby]
 gi|296108121|ref|YP_003619822.1| DNA repair protein RadC [Legionella pneumophila 2300/99 Alcoy]
 gi|229485555|sp|A5IEW9|Y1989_LEGPC RecName: Full=UPF0758 protein LPC_1989
 gi|148281831|gb|ABQ55919.1| DNA repair protein RadC [Legionella pneumophila str. Corby]
 gi|295650023|gb|ADG25870.1| DNA repair protein RadC [Legionella pneumophila 2300/99 Alcoy]
          Length = 227

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 55/90 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E    GTI+   VY R IV+R L+L+A ++IL HNHPSG  + S  D 
Sbjct: 128 LFLDSQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDF 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
            +T+ I   L+ ++  + DHI+IG +   S
Sbjct: 188 AITERIRDALDLVDARLLDHIVIGDNEVYS 217


>gi|319651725|ref|ZP_08005851.1| DNA repair protein RadC [Bacillus sp. 2_A_57_CT2]
 gi|317396544|gb|EFV77256.1| DNA repair protein RadC [Bacillus sp. 2_A_57_CT2]
          Length = 229

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +    G+++   V+ RE+ +     SA SII +HNHPSG+P PS  DI
Sbjct: 133 LYLNTKNQVLHKKTIFIGSLNASIVHPREVFKEAFRRSAASIICIHNHPSGDPTPSREDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +  +   + I V DH+IIG++ FVS K
Sbjct: 193 EVTKRLAESGKIIGIEVLDHLIIGENKFVSLK 224


>gi|237806959|ref|YP_002891399.1| DNA repair protein RadC [Tolumonas auensis DSM 9187]
 gi|259551912|sp|C4L814|Y183_TOLAT RecName: Full=UPF0758 protein Tola_0183
 gi|237499220|gb|ACQ91813.1| DNA repair protein RadC [Tolumonas auensis DSM 9187]
          Length = 224

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 47/74 (63%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GTID   VY REIVQ  L+ +A ++IL HNHPSG   PS AD ++T+ I   L  +++ V
Sbjct: 145 GTIDAASVYPREIVQTVLKHNAAAVILCHNHPSGVAEPSHADRHITERICDALRLIDVRV 204

Query: 78  HDHIIIGKDAFVSF 91
            DH +IG    VSF
Sbjct: 205 LDHFVIGDGDPVSF 218


>gi|149199804|ref|ZP_01876834.1| DNA repair protein RadC [Lentisphaera araneosa HTCC2155]
 gi|149137092|gb|EDM25515.1| DNA repair protein RadC [Lentisphaera araneosa HTCC2155]
          Length = 235

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 6/103 (5%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+     S G +D   V+ RE+ +  L      IIL HNHPSG+P+PS  DI
Sbjct: 131 LLLDTKNRLMRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPSPSPQDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG------KDAFVSFKGLRII 97
             T+N+I     L + V DH+IIG         FVS + L ++
Sbjct: 191 ECTKNLIEAGEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233


>gi|16803589|ref|NP_465074.1| DNA repair protein RadC [Listeria monocytogenes EGD-e]
 gi|47096713|ref|ZP_00234298.1| DNA repair protein RadC [Listeria monocytogenes str. 1/2a F6854]
 gi|224499790|ref|ZP_03668139.1| DNA repair protein RadC [Listeria monocytogenes Finland 1988]
 gi|224501511|ref|ZP_03669818.1| DNA repair protein RadC [Listeria monocytogenes FSL R2-561]
 gi|254828216|ref|ZP_05232903.1| DNA repair protein RadC [Listeria monocytogenes FSL N3-165]
 gi|254831950|ref|ZP_05236605.1| DNA repair protein RadC [Listeria monocytogenes 10403S]
 gi|254898284|ref|ZP_05258208.1| DNA repair protein RadC [Listeria monocytogenes J0161]
 gi|254912223|ref|ZP_05262235.1| DNA repair protein RadC [Listeria monocytogenes J2818]
 gi|254936551|ref|ZP_05268248.1| DNA repair protein RadC [Listeria monocytogenes F6900]
 gi|255026815|ref|ZP_05298801.1| DNA repair protein RadC [Listeria monocytogenes FSL J2-003]
 gi|284801939|ref|YP_003413804.1| DNA repair protein RadC [Listeria monocytogenes 08-5578]
 gi|284995081|ref|YP_003416849.1| DNA repair protein RadC [Listeria monocytogenes 08-5923]
 gi|25009032|sp|Q8Y6Y2|Y1549_LISMO RecName: Full=UPF0758 protein lmo1549
 gi|16410978|emb|CAC99627.1| lmo1549 [Listeria monocytogenes EGD-e]
 gi|47014897|gb|EAL05845.1| DNA repair protein RadC [Listeria monocytogenes str. 1/2a F6854]
 gi|258600605|gb|EEW13930.1| DNA repair protein RadC [Listeria monocytogenes FSL N3-165]
 gi|258609145|gb|EEW21753.1| DNA repair protein RadC [Listeria monocytogenes F6900]
 gi|284057501|gb|ADB68442.1| DNA repair protein RadC [Listeria monocytogenes 08-5578]
 gi|284060548|gb|ADB71487.1| DNA repair protein RadC [Listeria monocytogenes 08-5923]
 gi|293590197|gb|EFF98531.1| DNA repair protein RadC [Listeria monocytogenes J2818]
          Length = 224

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G ++   V+ RE+ +  L  SA SI+  HNHPSG+P PS  D+
Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPTPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    N + I + DHIIIGK+ ++S K
Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLK 219


>gi|307313278|ref|ZP_07592903.1| DNA repair protein RadC [Escherichia coli W]
 gi|306906961|gb|EFN37470.1| DNA repair protein RadC [Escherichia coli W]
 gi|315062961|gb|ADT77288.1| conserved hypothetical protein [Escherichia coli W]
 gi|323376447|gb|ADX48715.1| DNA repair protein RadC [Escherichia coli KO11]
          Length = 156

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + L+  E    GT+ H  V+ RE+V+  L+ +A ++IL HNHPSG    S  D 
Sbjct: 61  MYLDNQHCLLERETLFTGTLSHTEVHPREVVKSALKHNAAAVILAHNHPSGTTEISQQDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ I   L  + + V DH+++GK+  VSF
Sbjct: 121 YVTQRIAKALALVEVRVLDHLVVGKEV-VSF 150


>gi|154686939|ref|YP_001422100.1| DNA repair protein RadC [Bacillus amyloliquefaciens FZB42]
 gi|166218774|sp|A7Z793|Y2509_BACA2 RecName: Full=UPF0758 protein RBAM_025090
 gi|154352790|gb|ABS74869.1| RadC [Bacillus amyloliquefaciens FZB42]
          Length = 231

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G+++   V+ RE+ +   + SA S I VHNHPSG+P PS  DI
Sbjct: 135 LYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    N + I + DH++IG   FVS K
Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLK 226


>gi|317402956|gb|EFV83496.1| DNA repair protein radC [Achromobacter xylosoxidans C54]
          Length = 225

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LIA    +RGT+    VY RE+V+  L   A ++I+ HNHPSG   PS AD 
Sbjct: 129 LYLDSRLRLIASGELARGTLSQASVYPREVVREALRHHAAALIVAHNHPSGLAEPSAADQ 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+++   L  +++ + DH+II  D   S   L
Sbjct: 189 AFTRHLKQALALVDVALIDHLIIAGDTVTSMAEL 222


>gi|225619798|ref|YP_002721055.1| putative DNA repair protein RadC [Brachyspira hyodysenteriae WA1]
 gi|225214617|gb|ACN83351.1| putative DNA repair protein RadC [Brachyspira hyodysenteriae WA1]
          Length = 233

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 49/76 (64%)

Query: 17  RGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNII 76
           RGTID   +Y R++V++ L L A+ +I+ HNHPSG   PS  DI +T+ +      ++I 
Sbjct: 144 RGTIDSATIYPRDLVEKSLSLGASYVIISHNHPSGISKPSKEDIEITKVLYKAFLMVDIK 203

Query: 77  VHDHIIIGKDAFVSFK 92
           + DHII+  ++F SF+
Sbjct: 204 ILDHIIVAGNSFYSFR 219


>gi|160902910|ref|YP_001568491.1| DNA repair protein RadC [Petrotoga mobilis SJ95]
 gi|160360554|gb|ABX32168.1| DNA repair protein RadC [Petrotoga mobilis SJ95]
          Length = 222

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    +I  +  S GT++    + R+I +  +  +A S ILVHNHPSG+P PS  D 
Sbjct: 123 IFLDSKLHIITIKDISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNHPSGDPTPSMHDR 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ I+ +   L I ++DHIIIGKD++ SF
Sbjct: 183 DITKKIMDSGEILGINMNDHIIIGKDSYFSF 213


>gi|330831605|ref|YP_004394557.1| DNA repair protein RadC [Aeromonas veronii B565]
 gi|328806741|gb|AEB51940.1| DNA repair protein RadC [Aeromonas veronii B565]
          Length = 224

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 46/74 (62%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GTID   V+ REIVQ  L+ +A ++IL HNHPSG   PS AD  +T  I   L  ++I V
Sbjct: 145 GTIDSASVWPREIVQIALKHNAAAVILAHNHPSGVAEPSRADRQITDRITAALALIDIRV 204

Query: 78  HDHIIIGKDAFVSF 91
            DH++IG    VSF
Sbjct: 205 LDHLVIGDGITVSF 218


>gi|238793077|ref|ZP_04636706.1| DNA repair protein RadC [Yersinia intermedia ATCC 29909]
 gi|238727677|gb|EEQ19202.1| DNA repair protein RadC [Yersinia intermedia ATCC 29909]
          Length = 161

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+A E    GTI+   V+ RE+V+  ++ +A S +L HNHPS    PS AD 
Sbjct: 63  LWLDNQNRLLAQETLFTGTINSTTVHPRELVKSAMKHNAASAVLAHNHPSQLAEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  ++  L  +++ V DH+++G    VSF
Sbjct: 123 QITDRLVNALGLVDVRVLDHLVVGGLDIVSF 153


>gi|226324950|ref|ZP_03800468.1| hypothetical protein COPCOM_02742 [Coprococcus comes ATCC 27758]
 gi|225206298|gb|EEG88652.1| hypothetical protein COPCOM_02742 [Coprococcus comes ATCC 27758]
          Length = 236

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI +   SRGT++   +  RE+    L+ +A  IIL+HNHPSG+P PS  DI
Sbjct: 137 LMLNTRSRLIGESEISRGTVNMSVISPRELFIEALQKNAVYIILLHNHPSGDPMPSREDI 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I    + L I + DHIIIG + +VS    +++
Sbjct: 197 LVTQRIREGGSLLGIELLDHIIIGDNCYVSLAEQKLL 233


>gi|145638225|ref|ZP_01793835.1| DNA repair protein RadC [Haemophilus influenzae PittII]
 gi|145272554|gb|EDK12461.1| DNA repair protein RadC [Haemophilus influenzae PittII]
          Length = 214

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 118 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I  +   + I V DH+I+GK    SF
Sbjct: 178 LITKKIQESAELMEIRVLDHLIVGKTDCYSF 208


>gi|91791693|ref|YP_561344.1| DNA repair protein RadC [Shewanella denitrificans OS217]
 gi|122969048|sp|Q12SF5|Y326_SHEDO RecName: Full=UPF0758 protein Sden_0326
 gi|91713695|gb|ABE53621.1| DNA repair protein RadC [Shewanella denitrificans OS217]
          Length = 225

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKRAAAVIICHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH+++G    VSF
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDFEIVSF 218


>gi|110642215|ref|YP_669945.1| putative radC-like protein YeeS [Escherichia coli 536]
 gi|110343807|gb|ABG70044.1| putative radC-like protein YeeS [Escherichia coli 536]
          Length = 158

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+  E+++  L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPWEVIKCALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++  L  ++I V DH+I+G     SF
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSF 152


>gi|313633115|gb|EFS00011.1| putative DNA repair protein [Listeria seeligeri FSL N1-067]
 gi|313637692|gb|EFS03068.1| putative DNA repair protein [Listeria seeligeri FSL S4-171]
          Length = 224

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +I  +    G ++   V+ RE+ +  L  SA S++  HNHPSG+P+PS  D+
Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASLMCFHNHPSGDPSPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++   N + I + DHIIIGK+ ++S K
Sbjct: 188 LVTKRLVEAGNIIGITLLDHIIIGKNKYISLK 219


>gi|289434829|ref|YP_003464701.1| DNA repair protein RadC [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171073|emb|CBH27615.1| DNA repair protein RadC [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 224

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +I  +    G ++   V+ RE+ +  L  SA S++  HNHPSG+P+PS  D+
Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASLMCFHNHPSGDPSPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++   N + I + DHIIIGK+ ++S K
Sbjct: 188 LVTKRLVEAGNIIGITLLDHIIIGKNKYISLK 219


>gi|189423347|ref|YP_001950524.1| DNA repair protein RadC [Geobacter lovleyi SZ]
 gi|189419606|gb|ACD94004.1| DNA repair protein RadC [Geobacter lovleyi SZ]
          Length = 163

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++  +  S G+++   V+ RE+ +     +A +++LVHNHP+G+P PS  DI
Sbjct: 67  LHLDGKNRIVCFDRVSIGSLNQAIVHSREVFKTACLSNAAAVLLVHNHPTGDPTPSQEDI 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +  +   L I V DHII+G D F+SF  +GL
Sbjct: 127 AITRRLKESGEILGIKVLDHIIVGDDEFLSFVERGL 162


>gi|328957163|ref|YP_004374549.1| DNA repair protein RadC [Carnobacterium sp. 17-4]
 gi|328673487|gb|AEB29533.1| DNA repair protein RadC [Carnobacterium sp. 17-4]
          Length = 230

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  E    G ++    + REI +  +  SA  +I+ HNHPSGNP PS+ADI
Sbjct: 134 LYLNTKNEIIKKETIFIGGLNSSIAHPREIFKGAVRYSAARMIVGHNHPSGNPEPSEADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
             T+ +      + I + DHIIIG+  F+S K
Sbjct: 194 QFTRRMSECGELMGIDLLDHIIIGEHEFISLK 225


>gi|259047287|ref|ZP_05737688.1| DNA repair protein RadC [Granulicatella adiacens ATCC 49175]
 gi|259036063|gb|EEW37318.1| DNA repair protein RadC [Granulicatella adiacens ATCC 49175]
          Length = 227

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  ++   G ++    + REI +  +  SA  +I+ HNHPSGNP PS ADI
Sbjct: 131 LYLNTKNEVIKKKMIFIGGLNSAVAHPREIFREAVRYSAARVIIGHNHPSGNPEPSQADI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + T+ ++     + I + DH I+G + F+S K + ++
Sbjct: 191 DFTKRLMDCGELMGIELLDHFIVGGEHFISLKEIGVL 227


>gi|296331651|ref|ZP_06874120.1| DNA repair protein RadC [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675390|ref|YP_003867062.1| putative DNA repair protein [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296151246|gb|EFG92126.1| DNA repair protein RadC [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413634|gb|ADM38753.1| putative DNA repair protein [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 231

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G+++   V+ RE+ +   + SA S I VHNHPSG+P PS  DI
Sbjct: 135 LYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    N + I + DH++IG   FVS K
Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLK 226


>gi|291613221|ref|YP_003523378.1| DNA repair protein RadC [Sideroxydans lithotrophicus ES-1]
 gi|291583333|gb|ADE10991.1| DNA repair protein RadC [Sideroxydans lithotrophicus ES-1]
          Length = 224

 Score = 68.9 bits (167), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 4/97 (4%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           +F+D +H ++ A+E+  +GT+    VY RE+V+R L  +A ++I  HNHPSG   PS +D
Sbjct: 128 IFVDAQHRVICAEEL-FQGTLTQTSVYPREVVKRALHHNAAALIFAHNHPSGVAEPSQSD 186

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
             +T  ++  L  +++ V DH I+   A +SF  KG+
Sbjct: 187 QLLTDALMQALRLVDVRVLDHFIVAGAACLSFAEKGM 223


>gi|304310173|ref|YP_003809771.1| DNA repair protein [gamma proteobacterium HdN1]
 gi|301795906|emb|CBL44107.1| DNA repair protein [gamma proteobacterium HdN1]
          Length = 224

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI       GT+D   VY RE+V+  L  +A ++I  HNHPSG   PS AD 
Sbjct: 128 LFLDSQHRLIQYRELFYGTLDSAAVYPREVVKEALRCNAGALIFAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T  +   L+ ++I V DH+++G    VS 
Sbjct: 188 SITLRLRDALSLVDIRVLDHLVVGDCEVVSL 218


>gi|172046060|sp|A8FFU0|Y2444_BACP2 RecName: Full=UPF0758 protein BPUM_2444
          Length = 224

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 7/90 (7%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L KH + I       G+++   V+ REI +   + SA S I VHNHPSG+P PS  DI +
Sbjct: 137 LHKHTVFI-------GSLNSSIVHPREIFKEAFKRSAASFICVHNHPSGDPTPSREDIEV 189

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           TQ +      + I + DH++IG   FVS K
Sbjct: 190 TQRLFECGKLIGIQLLDHLVIGDQKFVSLK 219


>gi|153834271|ref|ZP_01986938.1| DNA repair protein RadC [Vibrio harveyi HY01]
 gi|148869373|gb|EDL68382.1| DNA repair protein RadC [Vibrio harveyi HY01]
          Length = 305

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/91 (36%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + + + E    GT++   VY RE+V++ L  +A+++I  HNHPSG   PS AD 
Sbjct: 209 IFLDNQHRVRSSEELFTGTVNAASVYPREVVKKALAENASAVIFYHNHPSGVAEPSQADR 268

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +I  L  +++ V DH ++  +  VSF
Sbjct: 269 RITRRLIDALALIDVRVLDHFVVSFEDTVSF 299


>gi|149181794|ref|ZP_01860285.1| DNA repair protein RadC [Bacillus sp. SG-1]
 gi|148850535|gb|EDL64694.1| DNA repair protein RadC [Bacillus sp. SG-1]
          Length = 229

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +    G+++   V+ RE+ +     SA SII +HNHPSG+P PS  DI
Sbjct: 133 LYLNTKNQVLHKQTIFIGSLNASIVHPREVFKEAFRRSAASIICIHNHPSGDPTPSREDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++     + I V DH+IIG+  +VS K
Sbjct: 193 EVTKRLVECGKIIGIEVLDHLIIGEKKYVSLK 224


>gi|172061461|ref|YP_001809113.1| DNA repair protein RadC [Burkholderia ambifaria MC40-6]
 gi|238692852|sp|B1YV93|Y2419_BURA4 RecName: Full=UPF0758 protein BamMC406_2419
 gi|171993978|gb|ACB64897.1| DNA repair protein RadC [Burkholderia ambifaria MC40-6]
          Length = 258

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+R L L+A ++I+ HNHPSG   PS  D 
Sbjct: 162 LYLDARHGLIDVEESARGSLTRMAVYPREIVRRALVLNAAALIIAHNHPSGAVQPSAEDR 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  ++  + DH+++G     SF
Sbjct: 222 RLTRVLHEALALIDAKLLDHVVVGTADTFSF 252


>gi|110801616|ref|YP_699420.1| DNA repair protein RadC [Clostridium perfringens SM101]
 gi|122956547|sp|Q0SR37|Y2111_CLOPS RecName: Full=UPF0758 protein CPR_2111
 gi|110682117|gb|ABG85487.1| DNA repair protein, RadC family [Clostridium perfringens SM101]
          Length = 227

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 55/90 (61%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +I+ +   +G ++   V+ REI +  ++ SA SII+ HNHPSG+P PS  DIN+
Sbjct: 133 LDTKNKVISKKEIFKGGLNSSLVHPREIFKEAVKDSAASIIICHNHPSGDPTPSRDDINI 192

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           T  +      + I + DH+IIG + F+S K
Sbjct: 193 TTRLKECGKMMGIELLDHLIIGDNRFISLK 222


>gi|115352599|ref|YP_774438.1| DNA repair protein RadC [Burkholderia ambifaria AMMD]
 gi|122322429|sp|Q0BCL9|Y2548_BURCM RecName: Full=UPF0758 protein Bamb_2548
 gi|115282587|gb|ABI88104.1| DNA replication and repair protein RadC [Burkholderia ambifaria
           AMMD]
          Length = 258

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+R L L+A ++I+ HNHPSG   PS  D 
Sbjct: 162 LYLDARHGLIDVEESARGSLTRMAVYPREIVRRALVLNAAALIIAHNHPSGAVQPSAEDR 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  ++  + DH+++G     SF
Sbjct: 222 RLTRVLHEALALIDAKLLDHVVVGTADTFSF 252


>gi|254283335|ref|ZP_04958303.1| DNA repair protein RadC [gamma proteobacterium NOR51-B]
 gi|219679538|gb|EED35887.1| DNA repair protein RadC [gamma proteobacterium NOR51-B]
          Length = 223

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 54/94 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI  E    GTID   V+ RE+V+  L   A S+I+ HNHPSG   PS+ D 
Sbjct: 127 LYLDSRNRLIVAEDLFAGTIDGAAVFPREVVRGALLHDAASVIVAHNHPSGALAPSEQDR 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ + + L+ ++I + DH I+G    VS   L
Sbjct: 187 QLTRRLSSALSLVDIRLLDHFIVGFGDSVSLASL 220


>gi|170728880|ref|YP_001762906.1| DNA repair protein RadC [Shewanella woodyi ATCC 51908]
 gi|238688685|sp|B1KL05|Y4561_SHEWM RecName: Full=UPF0758 protein Swoo_4561
 gi|169814227|gb|ACA88811.1| DNA repair protein RadC [Shewanella woodyi ATCC 51908]
          Length = 225

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY R++V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPRDVVSLVLEKKAAAVIVCHNHPSGVAEPSHADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L+ +++ + DH+++G    VSF
Sbjct: 188 RITERLKCALSTIDVSLLDHMVVGDREIVSF 218


>gi|157963648|ref|YP_001503682.1| DNA repair protein RadC [Shewanella pealeana ATCC 700345]
 gi|189029404|sp|A8H9B0|Y3837_SHEPA RecName: Full=UPF0758 protein Spea_3837
 gi|157848648|gb|ABV89147.1| DNA repair protein RadC [Shewanella pealeana ATCC 700345]
          Length = 225

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 46/75 (61%)

Query: 17  RGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNII 76
           RGTI+   VY RE+V   LE  A ++I+ HNHPSG   PS AD  +T+ +   L  +++ 
Sbjct: 144 RGTINSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSTADRRITERLKQALQTIDVS 203

Query: 77  VHDHIIIGKDAFVSF 91
           + DH+++G    VSF
Sbjct: 204 LLDHMVVGDREIVSF 218


>gi|16079856|ref|NP_390682.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310744|ref|ZP_03592591.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315069|ref|ZP_03596874.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319988|ref|ZP_03601282.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324270|ref|ZP_03605564.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|321312335|ref|YP_004204622.1| hypothetical protein BSn5_04835 [Bacillus subtilis BSn5]
 gi|400964|sp|Q02170|YSXA_BACSU RecName: Full=UPF0758 protein ysxA
 gi|142854|gb|AAA22396.1| homologous to E. coli radC gene product and to unidentified protein
           from Staphylococcus aureus [Bacillus subtilis]
 gi|143162|gb|AAA22583.1| orfB [Bacillus subtilis]
 gi|2635269|emb|CAB14764.1| putative DNA repair protein [Bacillus subtilis subsp. subtilis str.
           168]
 gi|320018609|gb|ADV93595.1| hypothetical protein BSn5_04835 [Bacillus subtilis BSn5]
          Length = 231

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G+++   V+ RE+ +   + SA S I VHNHPSG+P PS  DI
Sbjct: 135 LYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    N + I + DH++IG   FVS K
Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLK 226


>gi|39995494|ref|NP_951445.1| DNA repair protein RadC [Geobacter sulfurreducens PCA]
 gi|54036228|sp|Q74G62|Y386_GEOSL RecName: Full=UPF0758 protein GSU0386
 gi|39982257|gb|AAR33718.1| DNA repair protein RadC [Geobacter sulfurreducens PCA]
 gi|298504494|gb|ADI83217.1| protein of unknown function DUF2466 [Geobacter sulfurreducens
           KN400]
          Length = 229

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++ +   S G+++   V+ RE+    +  SA ++ILVHNHP+G+P PS  D+
Sbjct: 133 LLLDGKNRIMREIQVSEGSLNQSIVHPREVFNPAVRESAAAVILVHNHPTGDPAPSREDL 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +    + + I V DHIIIG   F SF
Sbjct: 193 EITRRLREAGDIMGIRVLDHIIIGDGRFTSF 223


>gi|309751380|gb|ADO81364.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
          Length = 221

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I  +   + I V DH+I+GK    SF
Sbjct: 185 LITKKIQESAELMEIRVLDHLIVGKTDCYSF 215


>gi|291485217|dbj|BAI86292.1| DNA repair protein RadC [Bacillus subtilis subsp. natto BEST195]
          Length = 231

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G+++   V+ RE+ +   + SA S I VHNHPSG+P PS  DI
Sbjct: 135 LYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    N + I + DH++IG   FVS K
Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLK 226


>gi|24373030|ref|NP_717072.1| RadC family DNA repair protein [Shewanella oneidensis MR-1]
 gi|24347195|gb|AAN54517.1|AE015589_12 DNA repair protein, RadC family [Shewanella oneidensis MR-1]
          Length = 157

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + LI       GTID   VY RE+V+  L  +A ++I  HNHPSG   PS AD 
Sbjct: 62  MMLDSQHRLIEFNEMFFGTIDSASVYPREVVKAVLLCNAAAVIFAHNHPSGCAEPSSADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T+ +I  L  +++ V DHI++  D  VSF  +GL
Sbjct: 122 RITERLIAALATIDVPVLDHIVVA-DTCVSFAERGL 156


>gi|311104975|ref|YP_003977828.1| DNA repair protein RadC 2 [Achromobacter xylosoxidans A8]
 gi|310759664|gb|ADP15113.1| DNA repair protein RadC 2 [Achromobacter xylosoxidans A8]
          Length = 225

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LIA    +RGT+    VY RE+V+  L   A ++I+ HNHPSG   PS AD 
Sbjct: 129 LYLDNRLRLIATGELARGTLSQASVYPREVVREALRHHAAALIIAHNHPSGLAEPSAADR 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             TQ++   L  ++I + DH+I+     +S   L
Sbjct: 189 GFTQHLKQALALVDIRLVDHLIVAAGTVISMAEL 222


>gi|24461706|gb|AAN62275.1|AF440524_62 putative DNA repair protein RadC [Pseudomonas aeruginosa]
          Length = 166

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 54/93 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL   + +IA E   RGTID   ++ R +VQR L  +A+++I  H HPSG   PS +D 
Sbjct: 70  VFLTAKHQVIACETLFRGTIDTAQIHPRVVVQRALLHNASALIAAHQHPSGCSEPSSSDE 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +TQ + + L  +++ + DH IIGK    SF  
Sbjct: 130 RLTQRLKSALEYVDVRLLDHFIIGKGQPFSFAA 162


>gi|302670846|ref|YP_003830806.1| DNA repair protein RadC [Butyrivibrio proteoclasticus B316]
 gi|302395319|gb|ADL34224.1| DNA repair protein RadC [Butyrivibrio proteoclasticus B316]
          Length = 237

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    LI + + S GT++   +  R++  R L+  A++IIL+HNHP+G+P+PS AD+
Sbjct: 139 LCLDNKLNLIEECLLSIGTVNSASLSPRDVFMRALKCGASNIILLHNHPTGDPSPSKADV 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T  I  +   L+I + DHIIIG  ++ S +
Sbjct: 199 IVTNKISESGIMLDIRLQDHIIIGDRSYCSLR 230


>gi|229823990|ref|ZP_04450059.1| hypothetical protein GCWU000282_01294 [Catonella morbi ATCC 51271]
 gi|229786344|gb|EEP22458.1| hypothetical protein GCWU000282_01294 [Catonella morbi ATCC 51271]
          Length = 231

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  ++   G+++    + REI +  ++     +I+ HNHPSG+P PS AD+
Sbjct: 133 LFLNSKNQVIRQQIIFIGSVNASVAHPREIFKEAVKYPTARLIIAHNHPSGDPEPSQADL 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + TQ +I   + + I + DH IIG D +VS +
Sbjct: 193 HFTQRMIQCGDLMGIELLDHFIIGHDDYVSLR 224


>gi|110800059|ref|YP_696822.1| DNA repair protein RadC [Clostridium perfringens ATCC 13124]
 gi|168208846|ref|ZP_02634471.1| DNA repair protein, RadC family [Clostridium perfringens B str.
           ATCC 3626]
 gi|123148570|sp|Q0TNG8|Y2399_CLOP1 RecName: Full=UPF0758 protein CPF_2399
 gi|110674706|gb|ABG83693.1| DNA repair protein, RadC family [Clostridium perfringens ATCC
           13124]
 gi|170713218|gb|EDT25400.1| DNA repair protein, RadC family [Clostridium perfringens B str.
           ATCC 3626]
          Length = 227

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 55/90 (61%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +I+ +   +G ++   V+ REI +  ++ SA SII+ HNHPSG+P PS  DIN+
Sbjct: 133 LDTKNKVISKKEIFKGGLNSSLVHPREIFREAVKDSAASIIICHNHPSGDPTPSRDDINI 192

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           T  +      + I + DH+IIG + F+S K
Sbjct: 193 TTRLKECGKMMGIELLDHLIIGDNRFISLK 222


>gi|237809187|ref|YP_002893627.1| DNA repair protein RadC [Tolumonas auensis DSM 9187]
 gi|237501448|gb|ACQ94041.1| DNA repair protein RadC [Tolumonas auensis DSM 9187]
          Length = 168

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A E   RGTI+   VY R +VQR L  +A ++I  H HPSGN  PS AD 
Sbjct: 72  LFLDTRHQVLAYEPLFRGTINQTSVYPRVVVQRALAANAAAVIFAHQHPSGNSEPSAADR 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L+ ++I V DH IIG+    SF
Sbjct: 132 MITRRLRDALDLIDIRVLDHFIIGQGEPYSF 162


>gi|168205621|ref|ZP_02631626.1| DNA repair protein, RadC family [Clostridium perfringens E str.
           JGS1987]
 gi|169344220|ref|ZP_02865202.1| DNA repair protein, RadC family [Clostridium perfringens C str.
           JGS1495]
 gi|169297679|gb|EDS79779.1| DNA repair protein, RadC family [Clostridium perfringens C str.
           JGS1495]
 gi|170662943|gb|EDT15626.1| DNA repair protein, RadC family [Clostridium perfringens E str.
           JGS1987]
          Length = 227

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 55/90 (61%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +I+ +   +G ++   V+ REI +  ++ SA SII+ HNHPSG+P PS  DIN+
Sbjct: 133 LDTKNKVISKKEIFKGGLNSSLVHPREIFREAVKDSAASIIICHNHPSGDPTPSRDDINI 192

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           T  +      + I + DH+IIG + F+S K
Sbjct: 193 TTRLKECGKMMGIELLDHLIIGDNRFISLK 222


>gi|167622369|ref|YP_001672663.1| DNA repair protein RadC [Shewanella halifaxensis HAW-EB4]
 gi|189029403|sp|B0TQL1|Y429_SHEHH RecName: Full=UPF0758 protein Shal_0429
 gi|167352391|gb|ABZ75004.1| DNA repair protein RadC [Shewanella halifaxensis HAW-EB4]
          Length = 225

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTI+   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTINSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSTADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH+++G    VSF
Sbjct: 188 RITERLKQALQTIDVSLLDHMVVGDREIVSF 218


>gi|18311126|ref|NP_563060.1| DNA repair protein RadC [Clostridium perfringens str. 13]
 gi|168212819|ref|ZP_02638444.1| DNA repair protein, RadC family [Clostridium perfringens CPE str.
           F4969]
 gi|168215771|ref|ZP_02641396.1| DNA repair protein, RadC family [Clostridium perfringens NCTC 8239]
 gi|182623959|ref|ZP_02951747.1| DNA repair protein, RadC family [Clostridium perfringens D str.
           JGS1721]
 gi|25009030|sp|Q8XIH5|Y2144_CLOPE RecName: Full=UPF0758 protein CPE2144
 gi|18145809|dbj|BAB81850.1| DNA repair protein [Clostridium perfringens str. 13]
 gi|170715570|gb|EDT27752.1| DNA repair protein, RadC family [Clostridium perfringens CPE str.
           F4969]
 gi|177910852|gb|EDT73206.1| DNA repair protein, RadC family [Clostridium perfringens D str.
           JGS1721]
 gi|182382393|gb|EDT79872.1| DNA repair protein, RadC family [Clostridium perfringens NCTC 8239]
          Length = 227

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 55/90 (61%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +I+ +   +G ++   V+ REI +  ++ SA SII+ HNHPSG+P PS  DIN+
Sbjct: 133 LDTKNKVISKKEIFKGGLNSSLVHPREIFREAVKDSAASIIICHNHPSGDPTPSRDDINI 192

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           T  +      + I + DH+IIG + F+S K
Sbjct: 193 TTRLKECGKMMGIELLDHLIIGDNRFISLK 222


>gi|238762714|ref|ZP_04623683.1| DNA repair protein RadC [Yersinia kristensenii ATCC 33638]
 gi|238699019|gb|EEP91767.1| DNA repair protein RadC [Yersinia kristensenii ATCC 33638]
          Length = 156

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + L+  E    GT+ H+ V+ RE+V+  L+ +A ++IL HNHPSG    S  D 
Sbjct: 61  MYLDNQHCLLERETLFTGTLSHIEVHPREVVKSALKHNAAAVILAHNHPSGTTEISQQDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++TQ I+  L  + + V DH+++G +  VSF
Sbjct: 121 HITQRIMKALALVEVRVLDHLVVGNEV-VSF 150


>gi|308174501|ref|YP_003921206.1| DNA repair protein [Bacillus amyloliquefaciens DSM 7]
 gi|307607365|emb|CBI43736.1| putative DNA repair protein [Bacillus amyloliquefaciens DSM 7]
 gi|328554420|gb|AEB24912.1| hypothetical protein BAMTA208_13755 [Bacillus amyloliquefaciens
           TA208]
 gi|328912824|gb|AEB64420.1| putative DNA repair protein [Bacillus amyloliquefaciens LL3]
          Length = 231

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 53/92 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G+++   V+ RE+ +   + SA S I VHNHPSG+P PS  DI
Sbjct: 135 LYLNTKNQVIHKRTIFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    N + I + DH++IG   FVS K
Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLK 226


>gi|290893950|ref|ZP_06556926.1| DNA repair protein RadC [Listeria monocytogenes FSL J2-071]
 gi|290556488|gb|EFD90026.1| DNA repair protein RadC [Listeria monocytogenes FSL J2-071]
 gi|313608630|gb|EFR84484.1| putative DNA repair protein [Listeria monocytogenes FSL F2-208]
          Length = 224

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G ++   V+ RE+ +  L  SA SI+  HNHPSG+P PS  D+
Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPAPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    N + I + DHIIIGK+ ++S K
Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLK 219


>gi|217964304|ref|YP_002349982.1| RadC [Listeria monocytogenes HCC23]
 gi|254789655|sp|B8DHJ9|Y1020_LISMH RecName: Full=UPF0758 protein LMHCC_1020
 gi|217333574|gb|ACK39368.1| RadC [Listeria monocytogenes HCC23]
 gi|307571130|emb|CAR84309.1| DNA repair protein [Listeria monocytogenes L99]
          Length = 224

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G ++   V+ RE+ +  L  SA SI+  HNHPSG+P PS  D+
Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPAPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    N + I + DHIIIGK+ ++S K
Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLK 219


>gi|157693205|ref|YP_001487667.1| DNA repair protein RadC [Bacillus pumilus SAFR-032]
 gi|157681963|gb|ABV63107.1| DNA repair protein RadC [Bacillus pumilus SAFR-032]
          Length = 232

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 7/90 (7%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L KH + I       G+++   V+ REI +   + SA S I VHNHPSG+P PS  DI +
Sbjct: 145 LHKHTVFI-------GSLNSSIVHPREIFKEAFKRSAASFICVHNHPSGDPTPSREDIEV 197

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           TQ +      + I + DH++IG   FVS K
Sbjct: 198 TQRLFECGKLIGIQLLDHLVIGDQKFVSLK 227


>gi|293604225|ref|ZP_06686633.1| DNA repair protein RadC [Achromobacter piechaudii ATCC 43553]
 gi|292817450|gb|EFF76523.1| DNA repair protein RadC [Achromobacter piechaudii ATCC 43553]
          Length = 225

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    +IA    +RGT+    VY RE+V+  L   A ++I+ HNHPSG   PS AD 
Sbjct: 129 LYLDNQLRVIATGELARGTLSQASVYPREVVREALRHHAAALIVAHNHPSGLAEPSAADR 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             TQ +   L  +++ + DH+I+   A +S   L
Sbjct: 189 GFTQQLKQALALVDVKLVDHLIVAGAAVISMAEL 222


>gi|194017399|ref|ZP_03056011.1| DNA repair protein RadC [Bacillus pumilus ATCC 7061]
 gi|194011267|gb|EDW20837.1| DNA repair protein RadC [Bacillus pumilus ATCC 7061]
          Length = 232

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 7/90 (7%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L KH + I       G+++   V+ REI +   + SA S I VHNHPSG+P PS  DI +
Sbjct: 145 LHKHTVFI-------GSLNSSIVHPREIFKEAFKRSAASFICVHNHPSGDPTPSREDIEV 197

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           TQ +      + I + DH++IG   FVS K
Sbjct: 198 TQRLFECGKLIGIQLLDHLVIGDQKFVSLK 227


>gi|315282469|ref|ZP_07870876.1| putative DNA repair protein [Listeria marthii FSL S4-120]
 gi|313613887|gb|EFR87624.1| putative DNA repair protein [Listeria marthii FSL S4-120]
          Length = 224

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 55/92 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G ++   V+ RE+ +  L  SA SI+  HNHPSG+P PS  D+
Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPAPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    N + I + DHIIIGK+ ++S K
Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLK 219


>gi|68249540|ref|YP_248652.1| DNA repair protein RadC [Haemophilus influenzae 86-028NP]
 gi|68057739|gb|AAX87992.1| DNA repair protein RadC homolog [Haemophilus influenzae 86-028NP]
          Length = 234

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 138 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I V DH+I+GK    SF
Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSF 228


>gi|145628112|ref|ZP_01783913.1| DNA repair protein RadC [Haemophilus influenzae 22.1-21]
 gi|144979887|gb|EDJ89546.1| DNA repair protein RadC [Haemophilus influenzae 22.1-21]
          Length = 99

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 53/91 (58%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 3  LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 62

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           +T+ I  +   + I V DH+I+GK    SF
Sbjct: 63 LITKKIQESAELMEIRVLDHLIVGKTDCYSF 93


>gi|91201867|emb|CAJ74927.1| similar to DNA repair protein RadC [Candidatus Kuenenia
           stuttgartiensis]
          Length = 232

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 53/91 (58%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD  N +I +   S G++    V+ RE+    ++ SA S++ VHNHPSG+P PS  DI 
Sbjct: 136 LLDNKNRIIKELTISIGSLTLSIVHPREVFSPAIKESAASVVFVHNHPSGDPEPSKEDIQ 195

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +TQ +    N + I V DHII+G   +VS +
Sbjct: 196 ITQRLQEVGNIVGIKVLDHIIVGNGCYVSLR 226


>gi|326801342|ref|YP_004319161.1| DNA repair protein RadC [Sphingobacterium sp. 21]
 gi|326552106|gb|ADZ80491.1| DNA repair protein RadC [Sphingobacterium sp. 21]
          Length = 233

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 54/91 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+ +N +IA E+ S+G    V V  + + Q  L+  AT +IL HNHPSG+  PS AD 
Sbjct: 137 LLLNTNNRVIAKELISKGGSGVVAVDAKGVFQAVLQAKATGLILSHNHPSGSLRPSMADK 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I+     L++ V DH+II  + + SF
Sbjct: 197 QLTKKIVEGGKLLDVRVLDHLIISDEGYYSF 227


>gi|229846012|ref|ZP_04466124.1| DNA repair protein RadC [Haemophilus influenzae 7P49H1]
 gi|229811016|gb|EEP46733.1| DNA repair protein RadC [Haemophilus influenzae 7P49H1]
          Length = 214

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 118 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I V DH+I+GK    SF
Sbjct: 178 LITKKIQDAAELMEIRVLDHLIVGKSDCYSF 208


>gi|171316763|ref|ZP_02905975.1| DNA repair protein RadC [Burkholderia ambifaria MEX-5]
 gi|171098113|gb|EDT42928.1| DNA repair protein RadC [Burkholderia ambifaria MEX-5]
          Length = 258

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+R L L+A ++I+ HNHPSG   PS  D 
Sbjct: 162 LYLDARHGLIDVEESARGSLTRMAVYPREIVRRALVLNAAALIVAHNHPSGAVQPSAEDR 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  ++  + DH+++G     SF
Sbjct: 222 RLTRVLHEALALIDAKLLDHVVVGTADTFSF 252


>gi|51891509|ref|YP_074200.1| DNA repair protein [Symbiobacterium thermophilum IAM 14863]
 gi|81692227|sp|Q67SI7|Y371_SYMTH RecName: Full=UPF0758 protein STH371
 gi|51855198|dbj|BAD39356.1| DNA repair protein [Symbiobacterium thermophilum IAM 14863]
          Length = 234

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 54/92 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I  E  S GT+    V+ RE+ +  +  SA ++IL HNHPSG+P PS  D 
Sbjct: 136 ILLNAKNQVIDVECVSEGTLTASLVHPREVFKTAIRRSAHAVILAHNHPSGDPTPSREDR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ ++     + I V DH+++G+  + SF+
Sbjct: 196 EITRRLVQAGRVIGIEVLDHLVVGQGGYTSFR 227


>gi|114567770|ref|YP_754924.1| DNA repair proteins [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338705|gb|ABI69553.1| DNA repair proteins [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 206

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++ N +++ E  S GT+    V+ RE+ +  +  +A S+ILVHNHPSG+P PS  DI
Sbjct: 110 ILLNRKNGILSVETISIGTLTSSMVHPREVFKPAIRKNAASVILVHNHPSGDPTPSREDI 169

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +      L I V DHIIIG  ++ S K
Sbjct: 170 EITKRLSECGQLLGIEVLDHIIIGDGSWNSLK 201


>gi|77459227|ref|YP_348734.1| DNA repair protein RadC [Pseudomonas fluorescens Pf0-1]
 gi|77383230|gb|ABA74743.1| putative DNA repair protein [Pseudomonas fluorescens Pf0-1]
          Length = 164

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A EV   G+ID   VY R++V+R L  +A + I VHNHPSG   PS AD 
Sbjct: 68  IFLDARHRVLAFEVLFHGSIDGASVYPRQVVKRSLAHNAAATIFVHNHPSGCTEPSQADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK 85
            +T  +   L  + + V DH I+G+
Sbjct: 128 VLTARLKEALALIEVRVLDHFIVGE 152


>gi|301169677|emb|CBW29278.1| protein associated with replication fork, possible DNA repair
           protein [Haemophilus influenzae 10810]
          Length = 234

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 138 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I V DH+I+GK    SF
Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSF 228


>gi|260580042|ref|ZP_05847872.1| DNA repair protein [Haemophilus influenzae RdAW]
 gi|329122974|ref|ZP_08251545.1| DNA repair protein RadC [Haemophilus aegyptius ATCC 11116]
 gi|260093326|gb|EEW77259.1| DNA repair protein [Haemophilus influenzae RdAW]
 gi|327471905|gb|EGF17345.1| DNA repair protein RadC [Haemophilus aegyptius ATCC 11116]
          Length = 234

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 138 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I V DH+I+GK    SF
Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSF 228


>gi|270158831|ref|ZP_06187488.1| DNA repair protein RadC [Legionella longbeachae D-4968]
 gi|289166376|ref|YP_003456514.1| DNA repair protein RadC (start is missing) [Legionella longbeachae
           NSW150]
 gi|269990856|gb|EEZ97110.1| DNA repair protein RadC [Legionella longbeachae D-4968]
 gi|288859549|emb|CBJ13514.1| DNA repair protein RadC (start is missing) [Legionella longbeachae
           NSW150]
          Length = 191

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%), Gaps = 2/91 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           LFLD +H I+  DE+ S GTI+   ++ R I++R L L+A ++IL HNHPSG  +PS  D
Sbjct: 85  LFLDNQHRIIAYDELFS-GTINTATIHPRPIIERVLRLNAAALILAHNHPSGVSDPSPQD 143

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
           I +T+ +   L  +++ + DHIIIG +   S
Sbjct: 144 IAVTERMREALELVDVRLLDHIIIGDNEVYS 174


>gi|260581787|ref|ZP_05849584.1| DNA repair protein RadC [Haemophilus influenzae NT127]
 gi|260095380|gb|EEW79271.1| DNA repair protein RadC [Haemophilus influenzae NT127]
          Length = 234

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 138 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I V DH+I+GK    SF
Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSF 228


>gi|145632338|ref|ZP_01788073.1| DNA repair protein RadC [Haemophilus influenzae 3655]
 gi|145634128|ref|ZP_01789839.1| DNA repair protein RadC [Haemophilus influenzae PittAA]
 gi|145637257|ref|ZP_01792918.1| DNA repair protein RadC [Haemophilus influenzae PittHH]
 gi|229843987|ref|ZP_04464128.1| DNA repair protein RadC [Haemophilus influenzae 6P18H1]
 gi|144987245|gb|EDJ93775.1| DNA repair protein RadC [Haemophilus influenzae 3655]
 gi|145268572|gb|EDK08565.1| DNA repair protein RadC [Haemophilus influenzae PittAA]
 gi|145269509|gb|EDK09451.1| DNA repair protein RadC [Haemophilus influenzae PittHH]
 gi|229812981|gb|EEP48669.1| DNA repair protein RadC [Haemophilus influenzae 6P18H1]
          Length = 214

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 118 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I V DH+I+GK    SF
Sbjct: 178 LITKKIQDAAELMEIRVLDHLIVGKSDCYSF 208


>gi|70733334|ref|YP_263109.1| DNA repair protein RadC [Pseudomonas fluorescens Pf-5]
 gi|123652038|sp|Q4K3S4|Y6051_PSEF5 RecName: Full=UPF0758 protein PFL_6051
 gi|68347633|gb|AAY95239.1| DNA repair protein RadC [Pseudomonas fluorescens Pf-5]
          Length = 224

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 54/85 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  EV  +G+ID   VY R++++R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDTRHRVLTFEVLFQGSIDSTTVYPRQVIKRALAHNAAAVILCHNHPSGICEPSPADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK 85
            +T+ +   L  +++ V DH I+G+
Sbjct: 188 VVTRRLQEALELIDVRVLDHFIVGE 212


>gi|325528992|gb|EGD06011.1| hypothetical protein B1M_03557 [Burkholderia sp. TJI49]
          Length = 230

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REI +R L L+A + I+ HNHPSG   PS  D 
Sbjct: 134 LYLDARHCLIDVEESARGSLTRMAVYPREIARRALTLNAAAAIVAHNHPSGAVRPSAEDR 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  ++  + DH+++G     SF
Sbjct: 194 RLTRVLRDALALIDTRLLDHVVVGVGDTFSF 224


>gi|302391343|ref|YP_003827163.1| DNA replication and repair protein RadC [Acetohalobium arabaticum
           DSM 5501]
 gi|302203420|gb|ADL12098.1| DNA replication and repair protein RadC [Acetohalobium arabaticum
           DSM 5501]
          Length = 229

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 56/92 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I+ E  S G++ +  V+ RE+ +  +  S+ ++IL HNHPSGNP PS  DI
Sbjct: 132 LLLNTKNEIISIEDISIGSLSNSIVHPREVFKPAIRRSSAAVILAHNHPSGNPEPSKEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++TQ I      L I V DH++IG   ++S K
Sbjct: 192 DITQRIKKAGKILGIEVLDHLVIGNKDYISLK 223


>gi|319654832|ref|ZP_08008908.1| hypothetical protein HMPREF1013_05530 [Bacillus sp. 2_A_57_CT2]
 gi|317393550|gb|EFV74312.1| hypothetical protein HMPREF1013_05530 [Bacillus sp. 2_A_57_CT2]
          Length = 218

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N++I  +   +G+++   V+ REI +  ++LSA SII  HNHPSG+P PS  DI
Sbjct: 121 LFLNSKNVVIGRKTIFKGSLNASIVHPREIFREAVKLSAASIIAGHNHPSGDPYPSREDI 180

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFK 92
            +T+ +      + I + DHIIIG    F S K
Sbjct: 181 EVTKRLSEAGKLVGIDLLDHIIIGHHGNFTSLK 213


>gi|206561051|ref|YP_002231816.1| DNA repair protein RadC [Burkholderia cenocepacia J2315]
 gi|198037093|emb|CAR53014.1| putative DNA repair protein [Burkholderia cenocepacia J2315]
          Length = 209

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 56/91 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N LI  E  +RG++  + VY REIV+R ++ +A ++I+ HNHPSG   PS  D 
Sbjct: 113 VYLDARNRLIDMEEIARGSLTRMAVYPREIVRRAMKHNAAALIVAHNHPSGAVQPSAEDR 172

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  +++ + DH+++G     SF
Sbjct: 173 RLTRVLKDALELVDVRLLDHVVVGVSDTFSF 203


>gi|146298177|ref|YP_001192768.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101]
 gi|229485553|sp|A5FMW5|Y413_FLAJ1 RecName: Full=UPF0758 protein Fjoh_0413
 gi|146152595|gb|ABQ03449.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101]
          Length = 229

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I+    S+G I    V +R + +  LE  AT +IL HNHPSG  NPS AD 
Sbjct: 133 LFLNNSNKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHPSGELNPSQADK 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I T    L++ + DH+II +  + SF
Sbjct: 193 QITKKIKTAGEILDVKILDHLIITETKYYSF 223


>gi|218245274|ref|YP_002370645.1| DNA repair protein RadC [Cyanothece sp. PCC 8801]
 gi|257058307|ref|YP_003136195.1| DNA repair protein RadC [Cyanothece sp. PCC 8802]
 gi|218165752|gb|ACK64489.1| DNA repair protein RadC [Cyanothece sp. PCC 8801]
 gi|256588473|gb|ACU99359.1| DNA repair protein RadC [Cyanothece sp. PCC 8802]
          Length = 243

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI  ++ + GT     V+ R+I +  L+  AT +I+ HNHPSG+ +PS  D+
Sbjct: 139 VFLDVKNRLIGTKIITIGTATETLVHPRDIFRETLKQGATRLIVAHNHPSGSLDPSSEDL 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ ++   N L I + DH+I+G+  + S +
Sbjct: 199 DLTEQLLEGANYLGIPLLDHLILGEGDYQSLR 230


>gi|117619575|ref|YP_854693.1| DNA repair protein RadC [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166218772|sp|A0KEM8|Y160_AERHH RecName: Full=UPF0758 protein AHA_0160
 gi|117560982|gb|ABK37930.1| DNA repair protein RadC [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 224

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 46/74 (62%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GT+D   V+ REIVQ  L+ +A ++IL HNHPSG   PS AD  +T  I   L  ++I V
Sbjct: 145 GTLDSASVWPREIVQIALKHNAAAVILAHNHPSGVAEPSRADRQITDRITAALALIDIRV 204

Query: 78  HDHIIIGKDAFVSF 91
            DH++IG    VSF
Sbjct: 205 LDHLVIGDGITVSF 218


>gi|71734935|ref|YP_272515.1| DNA repair protein RadC [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|289625760|ref|ZP_06458714.1| DNA repair protein RadC [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289646363|ref|ZP_06477706.1| DNA repair protein RadC [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|298484831|ref|ZP_07002931.1| DNA repair protein RadC [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|123638799|sp|Q48Q04|Y210_PSE14 RecName: Full=UPF0758 protein PSPPH_0210
 gi|71555488|gb|AAZ34699.1| DNA repair protein RadC [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|298160685|gb|EFI01706.1| DNA repair protein RadC [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|320322246|gb|EFW78342.1| DNA repair protein RadC [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320331895|gb|EFW87833.1| DNA repair protein RadC [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330866535|gb|EGH01244.1| hypothetical protein PSYAE_04585 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330873142|gb|EGH07291.1| hypothetical protein Pgy4_03892 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330890934|gb|EGH23595.1| hypothetical protein PSYMO_19883 [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330986860|gb|EGH84963.1| hypothetical protein PLA107_17667 [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331009400|gb|EGH89456.1| hypothetical protein PSYTB_06881 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 224

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 56/84 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           ++T+ +   L  +++ V DH+I+G
Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVG 211


>gi|319775112|ref|YP_004137600.1| DNA repair protein RadC-like protein [Haemophilus influenzae F3047]
 gi|309973545|gb|ADO96746.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
 gi|317449703|emb|CBY85910.1| DNA repair protein RadC homolog [Haemophilus influenzae F3047]
          Length = 221

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I V DH+I+GK    SF
Sbjct: 185 LITKKIQDAAELMEIRVLDHLIVGKSDCYSF 215


>gi|257481766|ref|ZP_05635807.1| DNA repair protein RadC [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 219

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 56/84 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           ++T+ +   L  +++ V DH+I+G
Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVG 211


>gi|157370015|ref|YP_001478004.1| DNA repair protein RadC [Serratia proteamaculans 568]
 gi|157321779|gb|ABV40876.1| DNA repair protein RadC [Serratia proteamaculans 568]
          Length = 160

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    G+I+   V+ REIV+  L+ +A +++L H HPSG+ +PSDAD 
Sbjct: 64  LYLDNQHRLLTHETLFTGSINSTEVHPREIVKSALKHNAAAVLLAHCHPSGHADPSDADR 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           N+T+ I   L  + + V DH I+G     SF
Sbjct: 124 NITRRIQEALMLVEVRVLDHCIVGGMTVYSF 154


>gi|218132457|ref|ZP_03461261.1| hypothetical protein BACPEC_00316 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992567|gb|EEC58569.1| hypothetical protein BACPEC_00316 [Bacteroides pectinophilus ATCC
           43243]
          Length = 246

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 52/92 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    LI DE+ S GT++   V  REI    L   A  I+++HNHPSG+  PS  DI
Sbjct: 146 VMLDTKLRLIKDEIISTGTVNASIVSPREIFVAALRAGAVFIVMLHNHPSGDAEPSSNDI 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +      L I + DHIIIG + FVS K
Sbjct: 206 AITRRVQLAGEMLGISLIDHIIIGDNRFVSLK 237


>gi|320530858|ref|ZP_08031895.1| putative DNA repair protein RadC [Selenomonas artemidis F0399]
 gi|320136892|gb|EFW28837.1| putative DNA repair protein RadC [Selenomonas artemidis F0399]
          Length = 228

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
            K++I++  EV SRGT+    V+ RE+    +  +A  IILVHNHPSG+P PS  D  +T
Sbjct: 136 SKNDIIMEAEV-SRGTLTRTLVHPREVFVPAIRCAAARIILVHNHPSGDPMPSAEDHRIT 194

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           + ++     L+I V DHI++G + + SF
Sbjct: 195 RILVEAGRLLSIPVVDHIVLGSEGYYSF 222


>gi|312134462|ref|YP_004001800.1| DNA repair protein radc [Caldicellulosiruptor owensensis OL]
 gi|311774513|gb|ADQ04000.1| DNA repair protein RadC [Caldicellulosiruptor owensensis OL]
          Length = 230

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 46/74 (62%)

Query: 18  GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
           GT+    VY R++V+  +  +A+S+IL HNHP G+  PS  DI  TQ I+  L+ + + V
Sbjct: 146 GTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSIRPSMDDIKTTQKIVNALSTIGVAV 205

Query: 78  HDHIIIGKDAFVSF 91
           +DH I+  D + SF
Sbjct: 206 NDHFIVAGDKYYSF 219


>gi|289674414|ref|ZP_06495304.1| DNA repair protein RadC [Pseudomonas syringae pv. syringae FF5]
 gi|330977334|gb|EGH77287.1| hypothetical protein PSYAP_11500 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 224

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 56/84 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           ++T+ +   L  +++ V DH+I+G
Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVG 211


>gi|145640620|ref|ZP_01796203.1| DNA repair protein RadC [Haemophilus influenzae R3021]
 gi|145274546|gb|EDK14409.1| DNA repair protein RadC [Haemophilus influenzae 22.4-21]
          Length = 221

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I V DH+I+GK    SF
Sbjct: 185 LITKKIQDAAELMEIRVLDHLIVGKSDCYSF 215


>gi|170697688|ref|ZP_02888776.1| DNA repair protein RadC [Burkholderia ambifaria IOP40-10]
 gi|170137436|gb|EDT05676.1| DNA repair protein RadC [Burkholderia ambifaria IOP40-10]
          Length = 258

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 55/91 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+R L L+A ++I+ HNHPSG   PS  D 
Sbjct: 162 LYLDARHGLIDVEESARGSLTRLAVYPREIVRRALVLNAAALIIAHNHPSGAVQPSAEDR 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ +   L  ++  + DH+++G     SF
Sbjct: 222 RLTRVLHEALALVDAKLLDHVVVGTADTFSF 252


>gi|160880508|ref|YP_001559476.1| DNA repair protein RadC [Clostridium phytofermentans ISDg]
 gi|160429174|gb|ABX42737.1| DNA repair protein RadC [Clostridium phytofermentans ISDg]
          Length = 232

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  D  + L+ +E+ S GT++   +  RE+    ++  A  IIL+HNHPSG+P PS  DI
Sbjct: 135 LMFDTKSKLLREEIISIGTVNASIMSPREVFLLAVKYEAVYIILLHNHPSGDPTPSKEDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L + + DHIIIG + ++S K   II
Sbjct: 195 AVTKRMKEAGELLGVTLMDHIIIGDNRYISLKEQGII 231


>gi|256819754|ref|YP_003141033.1| DNA repair protein RadC [Capnocytophaga ochracea DSM 7271]
 gi|256581337|gb|ACU92472.1| DNA repair protein RadC [Capnocytophaga ochracea DSM 7271]
          Length = 225

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G I H  V +R + +  LE  A ++ILVHNHPSG+  PS  DI
Sbjct: 129 LYLNSTNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGSTTPSKEDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +TQ + T    L+I + DH+I+ +  ++SF
Sbjct: 189 ELTQRVKTAGEMLDIKLLDHVIVTEKEYLSF 219


>gi|319897558|ref|YP_004135755.1| DNA repair protein radc homolog [Haemophilus influenzae F3031]
 gi|88930441|sp|Q4QLV5|Y1125_HAEI8 RecName: Full=UPF0758 protein NTHI1125
 gi|317433064|emb|CBY81438.1| DNA repair protein RadC homolog [Haemophilus influenzae F3031]
          Length = 221

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ I      + I V DH+I+GK    SF
Sbjct: 185 LITKKIQDAAELMEIRVLDHLIVGKSDCYSF 215


>gi|229824746|ref|ZP_04450815.1| hypothetical protein GCWU000182_00094 [Abiotrophia defectiva ATCC
           49176]
 gi|229791075|gb|EEP27189.1| hypothetical protein GCWU000182_00094 [Abiotrophia defectiva ATCC
           49176]
          Length = 240

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    LI +   S GTI+   +  RE+  + L+  A +++L+HNHPSG+P PS ADI
Sbjct: 132 LLLDIKCRLIKELTISIGTINQSFLRPREVFIQALKYEAVNLVLIHNHPSGDPTPSKADI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF--KGL 94
            +T  I+     + I + DHIIIG   +VSF  KGL
Sbjct: 192 IVTDKILEVSELVGIPLVDHIIIGDCCYVSFREKGL 227


>gi|237747755|ref|ZP_04578235.1| DNA repair protein radC [Oxalobacter formigenes OXCC13]
 gi|229379117|gb|EEO29208.1| DNA repair protein radC [Oxalobacter formigenes OXCC13]
          Length = 224

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 50/91 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI      RGT+    VY RE+V+  L  ++ S+I  HNHPSG  +PS+AD 
Sbjct: 128 LHLDIKNKLIECSEMFRGTLSQTSVYPREVVKAALANNSASVIFAHNHPSGKADPSNADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T  +   L  ++I V DHII+      SF
Sbjct: 188 TLTHALKQALGLVDIRVLDHIIVAGKNTYSF 218


>gi|163814086|ref|ZP_02205478.1| hypothetical protein COPEUT_00239 [Coprococcus eutactus ATCC 27759]
 gi|158450535|gb|EDP27530.1| hypothetical protein COPEUT_00239 [Coprococcus eutactus ATCC 27759]
          Length = 264

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  D  + LI D   S GT++   +  RE+  + L+  A  IILVHNHPSG+P PS  DI
Sbjct: 160 LMFDSKHKLIKDVRISEGTVNSSMLSPREVFVQALKYEAVFIILVHNHPSGDPTPSGEDI 219

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T  I    + + I + DHII+G + +VS 
Sbjct: 220 DITYRISDAGSMIGIDLSDHIILGNNCYVSL 250


>gi|302184918|ref|ZP_07261591.1| DNA repair protein RadC [Pseudomonas syringae pv. syringae 642]
          Length = 224

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 56/84 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG 84
           ++T+ +   L  +++ V DH+I+G
Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVG 211


>gi|320352278|ref|YP_004193617.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032]
 gi|320120780|gb|ADW16326.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032]
          Length = 159

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 2/87 (2%)

Query: 1   LFLD-KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           LFLD +H +L   E+   G+++   V+ REIV+  L L+A ++IL HNHPSG+  PS  D
Sbjct: 62  LFLDGRHQVLAWREL-FHGSVNRTTVHPREIVKEALRLNAAAVILAHNHPSGSTLPSSED 120

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKD 86
           I +T+ +   L  +++ V DH+I+G++
Sbjct: 121 IELTKALTEILAIIDV