BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 537021.9.peg.816_1 (97 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done >gi|15640247|ref|NP_229874.1| DNA repair protein RadC [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147674401|ref|YP_001218476.1| DNA repair protein RadC [Vibrio cholerae O395] gi|153820026|ref|ZP_01972693.1| DNA repair protein RadC [Vibrio cholerae NCTC 8457] gi|227080437|ref|YP_002808988.1| DNA repair protein RadC [Vibrio cholerae M66-2] gi|229506982|ref|ZP_04396490.1| DNA repair protein RadC [Vibrio cholerae BX 330286] gi|229509352|ref|ZP_04398835.1| DNA repair protein RadC [Vibrio cholerae B33] gi|229516299|ref|ZP_04405747.1| DNA repair protein RadC [Vibrio cholerae RC9] gi|229606490|ref|YP_002877138.1| DNA repair protein RadC [Vibrio cholerae MJ-1236] gi|254851346|ref|ZP_05240696.1| DNA repair protein RadC [Vibrio cholerae MO10] gi|255744029|ref|ZP_05417983.1| DNA repair protein RadC [Vibrio cholera CIRS 101] gi|298500859|ref|ZP_07010661.1| DNA repair protein RadC [Vibrio cholerae MAK 757] gi|13431812|sp|Q9KVC9|Y217_VIBCH RecName: Full=UPF0758 protein VC_0217 gi|172047481|sp|A5F402|Y3797_VIBC3 RecName: Full=UPF0758 protein VC0395_A2597/VC395_0249 gi|254789668|sp|C3LQH9|Y205_VIBCM RecName: Full=UPF0758 protein VCM66_0205 gi|9654624|gb|AAF93393.1| DNA repair protein RadC [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126509430|gb|EAZ72024.1| DNA repair protein RadC [Vibrio cholerae NCTC 8457] gi|146316284|gb|ABQ20823.1| DNA repair protein RadC [Vibrio cholerae O395] gi|227008325|gb|ACP04537.1| DNA repair protein RadC [Vibrio cholerae M66-2] gi|227012064|gb|ACP08274.1| DNA repair protein RadC [Vibrio cholerae O395] gi|229346725|gb|EEO11695.1| DNA repair protein RadC [Vibrio cholerae RC9] gi|229353667|gb|EEO18604.1| DNA repair protein RadC [Vibrio cholerae B33] gi|229356087|gb|EEO21006.1| DNA repair protein RadC [Vibrio cholerae BX 330286] gi|229369145|gb|ACQ59568.1| DNA repair protein RadC [Vibrio cholerae MJ-1236] gi|254847051|gb|EET25465.1| DNA repair protein RadC [Vibrio cholerae MO10] gi|255738294|gb|EET93685.1| DNA repair protein RadC [Vibrio cholera CIRS 101] gi|297540363|gb|EFH76422.1| DNA repair protein RadC [Vibrio cholerae MAK 757] Length = 224 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GTID VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L + I V DH ++G VSF I Sbjct: 188 RITDRLRDALGLVEIRVLDHFVVGDGEVVSFAERGWI 224 >gi|254436013|ref|ZP_05049520.1| DNA repair protein RadC [Nitrosococcus oceani AFC27] gi|207089124|gb|EDZ66396.1| DNA repair protein RadC [Nitrosococcus oceani AFC27] Length = 230 Score = 144 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A E RGTID V+ RE+++R L +A ++IL HNHPSG PS AD Sbjct: 134 LFLDNRHRVLAFEELFRGTIDGASVHPREVLKRALAHNAAAVILAHNHPSGVAEPSRADE 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L ++I V DHII+G +SF ++ Sbjct: 194 CITQRLKEALALVDIRVLDHIIVGDGETLSFAERGLL 230 >gi|37678469|ref|NP_933078.1| DNA repair protein RadC [Vibrio vulnificus YJ016] gi|320157667|ref|YP_004190046.1| DNA repair protein RadC [Vibrio vulnificus MO6-24/O] gi|326423775|ref|NP_759802.2| DNA repair protein RadC [Vibrio vulnificus CMCP6] gi|32129962|sp|Q8DDY0|Y825_VIBVU RecName: Full=UPF0758 protein VV1_0825 gi|54036231|sp|Q7MPS7|Y285_VIBVY RecName: Full=UPF0758 protein VV0285 gi|37197209|dbj|BAC93049.1| DNA repair protein [Vibrio vulnificus YJ016] gi|319932979|gb|ADV87843.1| DNA repair protein RadC [Vibrio vulnificus MO6-24/O] gi|319999137|gb|AAO09329.2| DNA repair protein RadC [Vibrio vulnificus CMCP6] Length = 224 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +I DEV GTID VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQNRVIKDEVMFEGTIDAASVYPREVVKRALHYNAAALILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I V DH ++G VSF I Sbjct: 188 RITRRLSDALGLVDIRVLDHFVVGDGEVVSFAERGWI 224 >gi|77163771|ref|YP_342296.1| DNA repair protein RadC [Nitrosococcus oceani ATCC 19707] gi|123595151|sp|Q3JEI0|Y236_NITOC RecName: Full=UPF0758 protein Noc_0236 gi|76882085|gb|ABA56766.1| DNA replication and repair protein RadC [Nitrosococcus oceani ATCC 19707] Length = 224 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A E RGTID V+ RE+++R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNRHRVLAFEELFRGTIDGASVHPREVLKRALAHNAAAVILAHNHPSGVAEPSRADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L ++I V DHII+G +SF ++ Sbjct: 188 CITQRLKEALALVDIRVLDHIIVGDGETLSFAERGLL 224 >gi|258620577|ref|ZP_05715614.1| DNA repair protein RadC [Vibrio mimicus VM573] gi|258625887|ref|ZP_05720762.1| DNA repair protein RadC [Vibrio mimicus VM603] gi|258581851|gb|EEW06725.1| DNA repair protein RadC [Vibrio mimicus VM603] gi|258587092|gb|EEW11804.1| DNA repair protein RadC [Vibrio mimicus VM573] Length = 224 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GTID VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L+ + I V DH ++G VSF I Sbjct: 188 RITDRLRDALSLVEIRVLDHFVVGDGEVVSFAERGWI 224 >gi|262163757|ref|ZP_06031497.1| DNA repair protein RadC [Vibrio mimicus VM223] gi|262027737|gb|EEY46402.1| DNA repair protein RadC [Vibrio mimicus VM223] Length = 224 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GTID VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L+ + I V DH ++G VSF I Sbjct: 188 RITDRLRDALSLVEIRVLDHFVVGDGEVVSFAERGWI 224 >gi|229524831|ref|ZP_04414236.1| DNA repair protein RadC [Vibrio cholerae bv. albensis VL426] gi|229338412|gb|EEO03429.1| DNA repair protein RadC [Vibrio cholerae bv. albensis VL426] Length = 224 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GTID VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L + I V DH ++G VSF I Sbjct: 188 RITGRLRDALGLVEIRVLDHFVVGDGEVVSFAERGWI 224 >gi|153800833|ref|ZP_01955419.1| DNA repair protein RadC [Vibrio cholerae MZO-3] gi|153825955|ref|ZP_01978622.1| DNA repair protein RadC [Vibrio cholerae MZO-2] gi|153831399|ref|ZP_01984066.1| DNA repair protein RadC [Vibrio cholerae 623-39] gi|229521064|ref|ZP_04410485.1| DNA repair protein RadC [Vibrio cholerae TM 11079-80] gi|229527280|ref|ZP_04416673.1| DNA repair protein RadC [Vibrio cholerae 12129(1)] gi|262404954|ref|ZP_06081506.1| DNA repair protein RadC [Vibrio sp. RC586] gi|297581670|ref|ZP_06943592.1| DNA repair protein RadC [Vibrio cholerae RC385] gi|124123664|gb|EAY42407.1| DNA repair protein RadC [Vibrio cholerae MZO-3] gi|148873120|gb|EDL71255.1| DNA repair protein RadC [Vibrio cholerae 623-39] gi|149740363|gb|EDM54499.1| DNA repair protein RadC [Vibrio cholerae MZO-2] gi|229335288|gb|EEO00772.1| DNA repair protein RadC [Vibrio cholerae 12129(1)] gi|229341949|gb|EEO06950.1| DNA repair protein RadC [Vibrio cholerae TM 11079-80] gi|262348793|gb|EEY97934.1| DNA repair protein RadC [Vibrio sp. RC586] gi|297534077|gb|EFH72916.1| DNA repair protein RadC [Vibrio cholerae RC385] gi|327483097|gb|AEA77504.1| DNA repair protein RadC [Vibrio cholerae LMA3894-4] Length = 224 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GTID VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L + I V DH ++G VSF I Sbjct: 188 RITDRLRDALGLVEIRVLDHFVVGDGEVVSFAERGWI 224 >gi|190572468|ref|YP_001970313.1| DNA repair protein RadC [Stenotrophomonas maltophilia K279a] gi|229485565|sp|B2FJW1|Y399_STRMK RecName: Full=UPF0758 protein Smlt0399 gi|190010390|emb|CAQ43998.1| putative DNA repair protein RadC [Stenotrophomonas maltophilia K279a] Length = 234 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E GTI+ PVY RE+V+R L +A ++IL HNHPSG+P PS AD Sbjct: 129 LFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSSADT 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ + DH ++G+ VSF ++ Sbjct: 189 RITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225 >gi|194364059|ref|YP_002026669.1| DNA repair protein RadC [Stenotrophomonas maltophilia R551-3] gi|238693502|sp|B4STE3|Y281_STRM5 RecName: Full=UPF0758 protein Smal_0281 gi|194346863|gb|ACF49986.1| DNA repair protein RadC [Stenotrophomonas maltophilia R551-3] Length = 234 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E GTI+ PVY RE+V+R L +A ++IL HNHPSG+P PS AD Sbjct: 129 LFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSSADT 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ + DH ++G+ VSF ++ Sbjct: 189 RITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225 >gi|260770727|ref|ZP_05879657.1| DNA repair protein RadC [Vibrio furnissii CIP 102972] gi|260614308|gb|EEX39497.1| DNA repair protein RadC [Vibrio furnissii CIP 102972] gi|315178477|gb|ADT85391.1| DNA repair protein RadC [Vibrio furnissii NCTC 11218] Length = 224 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DEV GTID VY RE+V+R L +A ++IL HNHPSG PS +D Sbjct: 128 LFLDNQHRVIRDEVLFEGTIDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSTSDR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I V DH ++G VSF I Sbjct: 188 RITRRLTDALALVDIRVLDHFVVGDGEVVSFAERGWI 224 >gi|261210491|ref|ZP_05924785.1| DNA repair protein RadC [Vibrio sp. RC341] gi|260840549|gb|EEX67115.1| DNA repair protein RadC [Vibrio sp. RC341] Length = 224 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GTID VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGIAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L + I V DH +IG VSF I Sbjct: 188 RITDRLRDALGLVEIRVLDHFVIGDGEVVSFAERGWI 224 >gi|254522249|ref|ZP_05134304.1| DNA repair protein [Stenotrophomonas sp. SKA14] gi|219719840|gb|EED38365.1| DNA repair protein [Stenotrophomonas sp. SKA14] Length = 246 Score = 143 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E GTI+ PVY RE+V+R L +A ++IL HNHPSG+P PS AD Sbjct: 141 LFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSGADT 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ + DH ++G+ VSF ++ Sbjct: 201 RITDELQQALALVDVRLLDHFVVGEGRPVSFAERGLL 237 >gi|262172690|ref|ZP_06040368.1| DNA repair protein RadC [Vibrio mimicus MB-451] gi|261893766|gb|EEY39752.1| DNA repair protein RadC [Vibrio mimicus MB-451] Length = 224 Score = 143 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GTID VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHNNAAAVILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L+ + I V DH ++G VSF I Sbjct: 188 RITDRLRDALSLVEIRVLDHFVVGDGEVVSFAERGWI 224 >gi|260774468|ref|ZP_05883382.1| DNA repair protein RadC [Vibrio metschnikovii CIP 69.14] gi|260610595|gb|EEX35800.1| DNA repair protein RadC [Vibrio metschnikovii CIP 69.14] Length = 224 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 45/97 (46%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I EV GTID VY RE+V+R L+L+A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIQGEVLFEGTIDAASVYPREVVKRALQLNAAALILAHNHPSGIAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L ++I V DH +IG VSF I Sbjct: 188 RITQRLVDALQLVDIRVLDHFVIGDGEVVSFAERGWI 224 >gi|163803269|ref|ZP_02197148.1| DNA repair protein RadC [Vibrio sp. AND4] gi|159172906|gb|EDP57744.1| DNA repair protein RadC [Vibrio sp. AND4] Length = 224 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GT+D VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I L ++I + DH +IG VSF I Sbjct: 188 RITRRLIDALALVDIRILDHFVIGDGESVSFAERGWI 224 >gi|269959366|ref|ZP_06173749.1| DNA repair protein RadC [Vibrio harveyi 1DA3] gi|269835803|gb|EEZ89879.1| DNA repair protein RadC [Vibrio harveyi 1DA3] Length = 224 Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GT+D VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I L ++I + DH +IG VSF I Sbjct: 188 RITRRLIDALALVDIRILDHFVIGDGESVSFAERGWI 224 >gi|260902399|ref|ZP_05910794.1| DNA repair protein RadC [Vibrio parahaemolyticus AQ4037] gi|308110861|gb|EFO48401.1| DNA repair protein RadC [Vibrio parahaemolyticus AQ4037] Length = 224 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GT+D VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I L ++I + DH +IG VSF I Sbjct: 188 RITRRLIDALALVDIRILDHFVIGDGESVSFAERGWI 224 >gi|156972975|ref|YP_001443882.1| DNA repair protein RadC [Vibrio harveyi ATCC BAA-1116] gi|166218799|sp|A7MSP7|Y653_VIBHB RecName: Full=UPF0758 protein VIBHAR_00653 gi|156524569|gb|ABU69655.1| hypothetical protein VIBHAR_00653 [Vibrio harveyi ATCC BAA-1116] Length = 224 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GT+D VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I L ++I + DH +IG VSF I Sbjct: 188 RITRRLIDALGLVDIRILDHFVIGDGESVSFAERGWI 224 >gi|218708245|ref|YP_002415866.1| DNA repair protein RadC [Vibrio splendidus LGP32] gi|254789669|sp|B7VHK2|Y182_VIBSL RecName: Full=UPF0758 protein VS_0182 gi|218321264|emb|CAV17214.1| DNA repair protein radC homolog [Vibrio splendidus LGP32] Length = 224 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +I DEV GTID VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQNRVIKDEVMFEGTIDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G +SF I Sbjct: 188 RITRRLTDALALVDIRILDHFVVGDGEVISFAERGWI 224 >gi|28896958|ref|NP_796563.1| DNA repair protein RadC [Vibrio parahaemolyticus RIMD 2210633] gi|260877858|ref|ZP_05890213.1| DNA repair protein RadC [Vibrio parahaemolyticus AN-5034] gi|260898016|ref|ZP_05906512.1| DNA repair protein RadC [Vibrio parahaemolyticus Peru-466] gi|31076907|sp|Q87T86|Y184_VIBPA RecName: Full=UPF0758 protein VP0184 gi|28805166|dbj|BAC58447.1| DNA repair protein RadC [Vibrio parahaemolyticus RIMD 2210633] gi|308089340|gb|EFO39035.1| DNA repair protein RadC [Vibrio parahaemolyticus Peru-466] gi|308089972|gb|EFO39667.1| DNA repair protein RadC [Vibrio parahaemolyticus AN-5034] gi|328471754|gb|EGF42631.1| hypothetical protein VP10329_01325 [Vibrio parahaemolyticus 10329] Length = 224 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GT+D VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I L ++I + DH +IG VSF I Sbjct: 188 RITRRLIDALALVDIRILDHFVIGDGESVSFAERGWI 224 >gi|262168070|ref|ZP_06035769.1| DNA repair protein RadC [Vibrio cholerae RC27] gi|262023603|gb|EEY42305.1| DNA repair protein RadC [Vibrio cholerae RC27] Length = 151 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GTID VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 55 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 114 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L + I V DH ++G VSF I Sbjct: 115 RITDRLRDALGLVEIRVLDHFVVGDGEVVSFAERGWI 151 >gi|260779661|ref|ZP_05888551.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450] gi|260604470|gb|EEX30774.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450] Length = 220 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DEV GTID +Y RE+V+R LE +A ++IL HNHPSG PS AD Sbjct: 124 LFLDNQHRVIKDEVMFEGTIDAASIYPREVVKRALEHNAAALILAHNHPSGVAEPSQADR 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I L ++I + DH ++G +SF I Sbjct: 184 RITQRISDALALVDIRILDHFVVGDGDVISFAERGWI 220 >gi|262392595|ref|YP_003284449.1| DNA repair protein RadC [Vibrio sp. Ex25] gi|262336189|gb|ACY49984.1| DNA repair protein RadC [Vibrio sp. Ex25] Length = 224 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GT+D VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH +IG VSF I Sbjct: 188 RITRRLTDALALVDIRILDHFVIGDGESVSFAERGWI 224 >gi|88813088|ref|ZP_01128330.1| DNA repair protein RadC [Nitrococcus mobilis Nb-231] gi|88789721|gb|EAR20846.1| DNA repair protein RadC [Nitrococcus mobilis Nb-231] Length = 224 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIA E RGTID VY RE+V+R LE +A ++I+ HNHPSG PS AD Sbjct: 128 LFLDNRNRLIAFEELFRGTIDAASVYPREVVRRALERNAAALIVAHNHPSGVSEPSRADA 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L ++I + DH ++G VS ++ Sbjct: 188 MLTQRLREALALVDIRLLDHFVVGDSEVVSLAERGLM 224 >gi|269965912|ref|ZP_06180005.1| DNA repair protein RadC [Vibrio alginolyticus 40B] gi|269829465|gb|EEZ83706.1| DNA repair protein RadC [Vibrio alginolyticus 40B] Length = 214 Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GT+D VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 118 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH +IG VSF + Sbjct: 178 RITRRLTDALALVDIRILDHFVIGDGESVSFAERGWM 214 >gi|153009239|ref|YP_001370454.1| DNA repair protein RadC [Ochrobactrum anthropi ATCC 49188] gi|229470322|sp|A6X071|Y1909_OCHA4 RecName: Full=UPF0758 protein Oant_1909 gi|151561127|gb|ABS14625.1| DNA repair protein RadC [Ochrobactrum anthropi ATCC 49188] Length = 249 Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 63/97 (64%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ ++ LNI VHDH+I+GK SF+GL +I Sbjct: 213 DMTKQLVNAAKALNITVHDHVIVGKHGHASFRGLGLI 249 >gi|292493862|ref|YP_003529301.1| DNA repair protein RadC [Nitrosococcus halophilus Nc4] gi|291582457|gb|ADE16914.1| DNA repair protein RadC [Nitrosococcus halophilus Nc4] Length = 224 Score = 140 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A E RGTID V+ RE+++R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNRHRVLAFEELFRGTIDGASVHPREVIKRALAHNAAAVILAHNHPSGVAEPSRADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + TL ++I V DHII+G +SF ++ Sbjct: 188 LITQRLKETLALVDIRVLDHIIVGDGETLSFAERGLL 224 >gi|152977701|ref|YP_001343330.1| DNA repair protein RadC [Actinobacillus succinogenes 130Z] gi|171472902|sp|A6VK98|Y013_ACTSZ RecName: Full=UPF0758 protein Asuc_0013 gi|150839424|gb|ABR73395.1| DNA repair protein RadC [Actinobacillus succinogenes 130Z] Length = 220 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E RGTI+ VY REI++ L +A ++IL HNHPSG+ PS +D Sbjct: 124 LFLDNQHRLIKKEDMFRGTINAASVYPREIIKTALYCNAAALILAHNHPSGSAEPSASDK 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I + I V DH +IGK + SF + Sbjct: 184 QMTKRIQAAAELMEIRVLDHFVIGKGCYFSFAEQDWL 220 >gi|119385035|ref|YP_916091.1| DNA repair protein RadC [Paracoccus denitrificans PD1222] gi|171704472|sp|A1B4F1|Y2304_PARDP RecName: Full=UPF0758 protein Pden_2304 gi|119374802|gb|ABL70395.1| DNA repair protein RadC [Paracoccus denitrificans PD1222] Length = 263 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 56/97 (57%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N+LIADE Q+RGT+DHVPVY REI++R LELSA+++ILVHNHPSG+P PS ADI Sbjct: 167 LYLDRKNVLIADEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQADI 226 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I+ + I VHDH+IIG+ +SF+ ++ Sbjct: 227 GMTNRIVAAAEVMGIAVHDHLIIGRSRELSFRSEGLL 263 >gi|307825840|ref|ZP_07656056.1| DNA repair protein RadC [Methylobacter tundripaludum SV96] gi|307733148|gb|EFO04009.1| DNA repair protein RadC [Methylobacter tundripaludum SV96] Length = 224 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I + RGTID VY RE+ ++ L +A ++I HNHPSG PS AD Sbjct: 128 LFLDNQHRVIQLDELFRGTIDGASVYPREVAKQALRHNAAAVIFAHNHPSGISEPSQADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +I V DH IIG SF ++ Sbjct: 188 HITEKLKQALALFDIRVLDHFIIGDGQPYSFAEHGLL 224 >gi|311696212|gb|ADP99085.1| DNA repair protein RadC-like protein [marine bacterium HP15] Length = 224 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I RGTID VY RE+V++ LE +A ++I HNHPSG PS ADI Sbjct: 128 LFLDNRHRVIQYRELFRGTIDGAAVYPREVVRQALEDNAAAVIFAHNHPSGVAEPSQADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L ++I V DH+++G VS ++ Sbjct: 188 SLTRRLKEALGLVDIRVLDHMVVGHGEVVSLAERGLL 224 >gi|209966646|ref|YP_002299561.1| DNA repair protein RadC, putative [Rhodospirillum centenum SW] gi|209960112|gb|ACJ00749.1| DNA repair protein RadC, putative [Rhodospirillum centenum SW] Length = 259 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 61/97 (62%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADEVQ RGT+DH PVY RE+V+R LEL+AT++ILVHNHPSG+P PS ADI Sbjct: 163 LFLDRKNTLIADEVQQRGTVDHTPVYPREVVKRALELNATALILVHNHPSGDPTPSRADI 222 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ II L ++VHDH+IIGK VSFK + ++ Sbjct: 223 EMTKQIIQAATALGVVVHDHVIIGKGRHVSFKSIGLM 259 >gi|296535628|ref|ZP_06897807.1| DNA repair protein RadC [Roseomonas cervicalis ATCC 49957] gi|296264052|gb|EFH10498.1| DNA repair protein RadC [Roseomonas cervicalis ATCC 49957] Length = 297 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 52/97 (53%), Positives = 69/97 (71%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIADE Q+RGT++H PVY RE+++R LEL AT++ILVHNHPSG+P PS ADI Sbjct: 201 LFLDSKNRLIADEAQARGTVNHTPVYPREVLRRALELHATALILVHNHPSGDPTPSSADI 260 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I ++++HDH+IIG SF+ ++ Sbjct: 261 EMTGEIRRAAQVFSVVLHDHLIIGNGRHFSFRREHLL 297 >gi|239832168|ref|ZP_04680497.1| DNA repair protein RadC [Ochrobactrum intermedium LMG 3301] gi|239824435|gb|EEQ96003.1| DNA repair protein RadC [Ochrobactrum intermedium LMG 3301] Length = 249 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 61/97 (62%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N +IADEVQ GT+D+ PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 153 LFLDKKNKMIADEVQQTGTVDYTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ ++ LNI VHDH+I+GK SF+GL +I Sbjct: 213 DMTRQLVNAAKALNITVHDHVIVGKHGHASFRGLGLI 249 >gi|113460290|ref|YP_718349.1| DNA repair protein RadC [Haemophilus somnus 129PT] gi|170719078|ref|YP_001783364.1| DNA repair protein RadC [Haemophilus somnus 2336] gi|123031084|sp|Q0I0X9|Y144_HAES1 RecName: Full=UPF0758 protein HS_0144 gi|189029396|sp|B0UUW7|Y009_HAES2 RecName: Full=UPF0758 protein HSM_0009 gi|112822333|gb|ABI24422.1| DNA repair protein [Haemophilus somnus 129PT] gi|168827207|gb|ACA32578.1| DNA repair protein RadC [Haemophilus somnus 2336] Length = 222 Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS AD Sbjct: 126 LFLDNQHRLIKKEEMFLGTINQANVYPREIIKTALFCNAAALILAHNHPSGVSTPSMADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+NI + I V DH IIGK + SF I Sbjct: 186 KMTENIKQLSELMEIRVLDHFIIGKGNYFSFAEQGWI 222 >gi|192360376|ref|YP_001983975.1| DNA repair protein RadC [Cellvibrio japonicus Ueda107] gi|238692434|sp|B3PG68|Y3522_CELJU RecName: Full=UPF0758 protein CJA_3522 gi|190686541|gb|ACE84219.1| DNA repair protein RadC [Cellvibrio japonicus Ueda107] Length = 224 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIA E +GTID VY RE+V++ L +A ++I HNHPSG PS ADI Sbjct: 128 LFLDNQNRLIAYEELFQGTIDGANVYPREVVKQALAHNAAAVIFAHNHPSGLAEPSQADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I V DH+++G VS + Sbjct: 188 RITRRLQEALGLVDIRVLDHLVVGDGELVSLAERGWL 224 >gi|260599935|ref|YP_003212506.1| DNA repair protein radC [Cronobacter turicensis z3032] gi|260219112|emb|CBA34467.1| DNA repair protein radC homolog [Cronobacter turicensis z3032] Length = 220 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N +I GT+ HV V+ REIV+ + L+A +IIL HNHPSG+ PS AD Sbjct: 124 IFLDSQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAAIILAHNHPSGHAEPSRADK 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ ++I V DH++IG+ +VSF I Sbjct: 184 MVTERIVKCCQLVDIRVLDHLVIGRGEYVSFAERGWI 220 >gi|85710819|ref|ZP_01041880.1| RadC [Idiomarina baltica OS145] gi|85695223|gb|EAQ33160.1| RadC [Idiomarina baltica OS145] Length = 260 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + L+ E GTI+ PVY RE+++ ++ +A ++IL HNHPSG PS AD Sbjct: 164 LLLDSQHRLLRYEELFYGTINAAPVYPREVLKLVMQHNAAAVILAHNHPSGVAEPSQADK 223 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH +IG VSF +I Sbjct: 224 RVTERLQKALALVDVALLDHFVIGSGDPVSFAERGLI 260 >gi|253575692|ref|ZP_04853028.1| DNA repair protein RadC [Paenibacillus sp. oral taxon 786 str. D14] gi|251845030|gb|EES73042.1| DNA repair protein RadC [Paenibacillus sp. oral taxon 786 str. D14] Length = 231 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +IA E S G+++ V+ RE+ + ++ S+ S++ HNHPSG+P PS DI Sbjct: 135 LFLNTKNHIIAQETLSIGSLNASIVHPREVFRAAIKCSSASVVCAHNHPSGDPTPSPEDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + + I V DHI+IG FVS K ++ Sbjct: 195 RMTRRLCEAGEIIGIDVLDHIVIGDGKFVSLKERGLM 231 >gi|121999079|ref|YP_001003866.1| DNA repair protein RadC [Halorhodospira halophila SL1] gi|166218781|sp|A1WZF2|Y2301_HALHL RecName: Full=UPF0758 protein Hhal_2301 gi|121590484|gb|ABM63064.1| DNA replication and repair protein RadC [Halorhodospira halophila SL1] Length = 224 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E RGTI+ VY RE+V+R L +A ++I+ HNHPSG PS AD Sbjct: 128 LFLDNRHRVIGFEELFRGTINGASVYPRELVRRALAHNAAAVIVAHNHPSGITEPSAADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ + DH ++G VS ++ Sbjct: 188 ALTHRLREALGLVDVRLLDHFVVGDGEPVSLAERGVL 224 >gi|323495229|ref|ZP_08100311.1| hypothetical protein VIBR0546_16286 [Vibrio brasiliensis LMG 20546] gi|323310489|gb|EGA63671.1| hypothetical protein VIBR0546_16286 [Vibrio brasiliensis LMG 20546] Length = 222 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E +GTID VY RE+V+R LE +A ++IL HNHPSG PS +D Sbjct: 126 LFLDNQHRVICGEPLFQGTIDAASVYPREVVKRALEHNAAALILAHNHPSGIAEPSQSDR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II L+ ++I V DH ++G VSF I Sbjct: 186 RITRRIIDALDLVDIRVLDHFVVGDGEIVSFAERGWI 222 >gi|297581219|ref|ZP_06943143.1| DNA repair protein [Vibrio cholerae RC385] gi|297534535|gb|EFH73372.1| DNA repair protein [Vibrio cholerae RC385] Length = 169 Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI + RGT+D VY RE+++ L ++A ++I HNHPSG+P PS AD Sbjct: 74 LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 133 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ ++I V DH+++GK + VSF + Sbjct: 134 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 169 >gi|300815950|ref|ZP_07096174.1| putative DNA repair protein RadC [Escherichia coli MS 107-1] gi|300531879|gb|EFK52941.1| putative DNA repair protein RadC [Escherichia coli MS 107-1] Length = 163 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIADE GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIADETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 163 >gi|288942684|ref|YP_003444924.1| DNA repair protein RadC [Allochromatium vinosum DSM 180] gi|288898056|gb|ADC63892.1| DNA repair protein RadC [Allochromatium vinosum DSM 180] Length = 224 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E RGTID V+ RE+V+R ++ +A ++I HNHPSG PS AD+ Sbjct: 128 LFLDNRHRVIVYEELFRGTIDGASVHPREVVRRVIQTNAAAVIFAHNHPSGVAEPSQADL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHII+G SF ++ Sbjct: 188 RITQRLKEALALIDVRVLDHIIVGDGDGTSFAERGLL 224 >gi|82703257|ref|YP_412823.1| DNA repair protein RadC [Nitrosospira multiformis ATCC 25196] gi|123544109|sp|Q2Y740|Y2138_NITMU RecName: Full=UPF0758 protein Nmul_A2138 gi|82411322|gb|ABB75431.1| DNA replication and repair protein RadC [Nitrosospira multiformis ATCC 25196] Length = 224 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N +IA E +GT+ VY RE+V+R L +A ++I HNHPSG PS AD Sbjct: 128 IFLDARNRVIATEELFQGTLTQTSVYPREVVKRALHHNAAAVIFAHNHPSGAAEPSHADA 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ++ L +++ V DH I+G+ A +SF +I Sbjct: 188 VLTQSLKQALLLVDVRVLDHFIVGRGATLSFAEQGLI 224 >gi|16130559|ref|NP_417131.1| CP4-57 prophage; predicted DNA repair protein [Escherichia coli str. K-12 substr. MG1655] gi|89109442|ref|AP_003222.1| predicted DNA repair protein [Escherichia coli str. K-12 substr. W3110] gi|170082243|ref|YP_001731563.1| CP4-57 prophage; DNA repair protein [Escherichia coli str. K-12 substr. DH10B] gi|238901798|ref|YP_002927594.1| CP4-57 prophage; putative DNA repair protein [Escherichia coli BW2952] gi|1723637|sp|P52140|YFJY_ECOLI RecName: Full=UPF0758 protein yfjY gi|1033138|gb|AAA79812.1| ORF_o160 [Escherichia coli str. K-12 substr. MG1655] gi|1788997|gb|AAC75692.1| CP4-57 prophage; predicted DNA repair protein [Escherichia coli str. K-12 substr. MG1655] gi|1800034|dbj|BAA16512.1| predicted DNA repair protein [Escherichia coli str. K12 substr. W3110] gi|169890078|gb|ACB03785.1| CP4-57 prophage; predicted DNA repair protein [Escherichia coli str. K-12 substr. DH10B] gi|238860625|gb|ACR62623.1| CP4-57 prophage; predicted DNA repair protein [Escherichia coli BW2952] gi|260448288|gb|ACX38710.1| DNA repair protein RadC [Escherichia coli DH1] gi|315137260|dbj|BAJ44419.1| CP4-57 prophage; putative DNA repair protein [Escherichia coli DH1] Length = 160 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ N LIA E G+I V+ RE+V+R L +A ++IL HNHPSG+ PS AD Sbjct: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L ++I V DH+I+G SF ++ Sbjct: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 >gi|238750801|ref|ZP_04612299.1| DNA repair protein radC [Yersinia rohdei ATCC 43380] gi|238710945|gb|EEQ03165.1| DNA repair protein radC [Yersinia rohdei ATCC 43380] Length = 235 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I E GTI V V+ REIV+ L+++A ++IL HNHPSG PS AD Sbjct: 139 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT ++ + L+I V DH+++G+ VSF + Sbjct: 199 LMTTQVVKACSLLDIRVLDHLVVGRGECVSFAERGWL 235 >gi|83643895|ref|YP_432330.1| DNA repair protein [Hahella chejuensis KCTC 2396] gi|123534642|sp|Q2SN69|Y1020_HAHCH RecName: Full=UPF0758 protein HCH_01020 gi|83631938|gb|ABC27905.1| DNA repair protein [Hahella chejuensis KCTC 2396] Length = 224 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA E RGTID V+ RE+V+R L+ +A +II HNHPSG PS +D Sbjct: 128 LFLDNQHRVIAYEELFRGTIDSASVHPREVVRRVLKHNAAAIIFAHNHPSGVAEPSLSDK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH+I+G VS I Sbjct: 188 EITETLRKALRLVDVRVLDHMIVGDGEVVSLAERGWI 224 >gi|238785016|ref|ZP_04629013.1| DNA repair protein RadC [Yersinia bercovieri ATCC 43970] gi|238714057|gb|EEQ06072.1| DNA repair protein RadC [Yersinia bercovieri ATCC 43970] Length = 162 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIA E +GT++ V+ RE+V+ L ++ +++L HNHPSG+ PS AD Sbjct: 64 LFLDNQNRLIAYETLFKGTVNSTEVHPREVVKAALRHNSAAVLLAHNHPSGHAEPSQADR 123 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L+ +++ V DH+++G VSF + Sbjct: 124 QITDRLVNVLDLVDVRVLDHLVVGGLDIVSFAERGWL 160 >gi|219872082|ref|YP_002476457.1| DNA repair protein RadC [Haemophilus parasuis SH0165] gi|219692286|gb|ACL33509.1| DNA repair protein RadC [Haemophilus parasuis SH0165] Length = 197 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 40/94 (42%), Positives = 59/94 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N LI E GTI+ V+ REI++ L+ +A +I++ HNHPSGN NPS+AD Sbjct: 85 IFLDNQNRLIKTEKMFYGTINQASVHPREIIKEALKCNAAAILVAHNHPSGNCNPSEADR 144 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ I + ++I DHII+GK + SF+ Sbjct: 145 FLTRKIEMACDLVDIRFVDHIIVGKGDYFSFEEE 178 >gi|88705880|ref|ZP_01103589.1| radC-like protein yeeS [Congregibacter litoralis KT71] gi|88699951|gb|EAQ97061.1| radC-like protein yeeS [Congregibacter litoralis KT71] Length = 169 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI RGTID VY RE+V+ L L+A ++I HNHPSGNP PS AD Sbjct: 73 LFLDSQHRLIEYTEMFRGTIDSASVYPREVVKEALRLNAAAVIFSHNHPSGNPEPSRADE 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ DH+I+ SF +I Sbjct: 133 AITKRLKEALALVDVRTLDHVIVAGSDTTSFAERGLI 169 >gi|126664654|ref|ZP_01735638.1| DNA repair protein RadC [Marinobacter sp. ELB17] gi|126630980|gb|EBA01594.1| DNA repair protein RadC [Marinobacter sp. ELB17] Length = 184 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I RGTID VY RE+V++ LE +A ++I HNHPSG PS ADI Sbjct: 88 LFLDNRHRIIHYRELFRGTIDGAAVYPREVVRQALEDNAAAVIFAHNHPSGVAEPSQADI 147 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I V DH+++G +S ++ Sbjct: 148 ALTKRLKDALALVDIRVLDHMVVGHGEVISLAERGLM 184 >gi|194335153|ref|YP_002019719.1| DNA repair protein RadC [Prosthecochloris aestuarii DSM 271] gi|194312971|gb|ACF47365.1| DNA repair protein RadC [Prosthecochloris aestuarii DSM 271] Length = 165 Score = 137 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N +I E+ SRGT++ V+ RE+ + +A SI+L HNHPSGN PS AD Sbjct: 69 LYLDTKNKIIGLEMISRGTLNASLVHPREVFKGAFLANANSIMLAHNHPSGNTEPSSADK 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L++ V DHII+G + SF+ +I Sbjct: 129 LVTSRLVKAGKLLDLQVLDHIIVGDKGYYSFRESGLI 165 >gi|114328318|ref|YP_745475.1| DNA repair protein radC [Granulibacter bethesdensis CGDNIH1] gi|114316492|gb|ABI62552.1| DNA repair protein radC [Granulibacter bethesdensis CGDNIH1] Length = 271 Score = 137 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 49/97 (50%), Positives = 70/97 (72%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIADE+ + GT++H PVY RE+V+R LEL AT++I+VHNHPSG+P PS DI Sbjct: 175 LFLDNRNQLIADEILAHGTVNHAPVYPREVVKRALELHATALIVVHNHPSGDPTPSAEDI 234 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + L++ +HDH+IIG+ + SF+ ++ Sbjct: 235 RMTRELREAGRLLSLDLHDHVIIGRHGWSSFRKQGLL 271 >gi|121727688|ref|ZP_01680783.1| DNA repair protein RadC, putative [Vibrio cholerae V52] gi|298498145|ref|ZP_07007952.1| DNA repair protein [Vibrio cholerae MAK 757] gi|121629985|gb|EAX62393.1| DNA repair protein RadC, putative [Vibrio cholerae V52] gi|297542478|gb|EFH78528.1| DNA repair protein [Vibrio cholerae MAK 757] Length = 169 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI + RGT+D VY RE+++ L ++A ++I HNHPSG+P PS AD Sbjct: 74 LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 133 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ ++I V DH+++GK + VSF + Sbjct: 134 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 169 >gi|114321811|ref|YP_743494.1| DNA repair protein RadC [Alkalilimnicola ehrlichii MLHE-1] gi|122310756|sp|Q0A583|Y2664_ALHEH RecName: Full=UPF0758 protein Mlg_2664 gi|114228205|gb|ABI58004.1| DNA replication and repair protein RadC [Alkalilimnicola ehrlichii MLHE-1] Length = 224 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E +GTID VY RE+VQR L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNRHRVVRYEELFQGTIDAASVYPREVVQRALAHNAAAVILAHNHPSGVAEPSVADQ 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I V DH ++G VSF ++ Sbjct: 188 ALTRRLQEALGLVDIRVLDHFVVGDGRPVSFAERGLM 224 >gi|262402819|ref|ZP_06079380.1| DNA repair protein RadC [Vibrio sp. RC586] gi|262351601|gb|EEZ00734.1| DNA repair protein RadC [Vibrio sp. RC586] Length = 158 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI + RGT+D VY RE+++ L ++A ++I HNHPSG+P PS AD Sbjct: 63 LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ ++I V DH+++GK + VSF + Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 158 >gi|242237618|ref|YP_002985799.1| DNA repair protein RadC [Dickeya dadantii Ech703] gi|242129675|gb|ACS83977.1| DNA repair protein RadC [Dickeya dadantii Ech703] Length = 221 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I + GTI+ V V+ RE+V+ L+ +A ++IL HNHPSG PS AD Sbjct: 125 MFLDNQHHVIRYQEMFAGTINSVEVHPREVVREALKSNAAALILAHNHPSGRAEPSQADR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++I+ L I V DH++IG+ +VSF I Sbjct: 185 RITEHIVNACRLLEIRVLDHLVIGRGEYVSFAERGWI 221 >gi|229529171|ref|ZP_04418561.1| DNA repair protein RadC [Vibrio cholerae 12129(1)] gi|229530051|ref|ZP_04419441.1| DNA repair protein RadC [Vibrio cholerae 12129(1)] gi|254285246|ref|ZP_04960211.1| DNA repair protein RadC, putative [Vibrio cholerae AM-19226] gi|258620000|ref|ZP_05715040.1| RadC-like protein [Vibrio mimicus VM573] gi|150424518|gb|EDN16454.1| DNA repair protein RadC, putative [Vibrio cholerae AM-19226] gi|229332945|gb|EEN98431.1| DNA repair protein RadC [Vibrio cholerae 12129(1)] gi|229333825|gb|EEN99311.1| DNA repair protein RadC [Vibrio cholerae 12129(1)] gi|258587733|gb|EEW12442.1| RadC-like protein [Vibrio mimicus VM573] Length = 158 Score = 137 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI + RGT+D VY RE+++ L ++A ++I HNHPSG+P PS AD Sbjct: 63 LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ ++I V DH+++GK + VSF + Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 158 >gi|295695338|ref|YP_003588576.1| DNA repair protein RadC [Bacillus tusciae DSM 2912] gi|295410940|gb|ADG05432.1| DNA repair protein RadC [Bacillus tusciae DSM 2912] Length = 228 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 63/97 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + ++ +EV S GT++ V+ RE+ + ++ +A +++ VHNHPSG+P PS DI Sbjct: 132 LHLDTKHRVLGEEVVSVGTLNASLVHPREVFRTAIKRNAAAVVCVHNHPSGDPTPSPEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ I+ + L I + DH++IG+ +VS + +I Sbjct: 192 DVTKRIVESGRILGIDLVDHVVIGRGTYVSMRERGLI 228 >gi|146337832|ref|YP_001202880.1| DNA repair protein RadC [Bradyrhizobium sp. ORS278] gi|146190638|emb|CAL74640.1| DNA repair protein RadC homolog [Bradyrhizobium sp. ORS278] Length = 237 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 60/97 (61%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+++R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 141 LFLDKRNQLIADEVQQTGTVDHTPVYPREVIKRALELSATAIILVHNHPSGDPTPSQADI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I+ PL I VHDHII+G++ S K ++ Sbjct: 201 RMTKTIVEIAKPLGITVHDHIIVGRNGHTSLKSNGLM 237 >gi|167855900|ref|ZP_02478650.1| DNA repair protein RadC [Haemophilus parasuis 29755] gi|167852988|gb|EDS24252.1| DNA repair protein RadC [Haemophilus parasuis 29755] Length = 238 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 40/94 (42%), Positives = 59/94 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N LI E GTI+ V+ REI++ L+ +A +I++ HNHPSGN NPS+AD Sbjct: 126 IFLDNQNRLIKTEKMFYGTINQASVHPREIIKEALKCNAAAILVAHNHPSGNCNPSEADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ I + ++I DHII+GK + SF+ Sbjct: 186 FLTRKIEMACDLVDIRFVDHIIVGKGDYFSFEEE 219 >gi|251798399|ref|YP_003013130.1| DNA repair protein RadC [Paenibacillus sp. JDR-2] gi|247546025|gb|ACT03044.1| DNA repair protein RadC [Paenibacillus sp. JDR-2] Length = 228 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +IA E S GT++ V+ RE+ + ++ + SII VHNHPSG+P PS DI Sbjct: 132 LFLNTKNHIIARETLSVGTLNASLVHPREVFRAAVKAGSASIICVHNHPSGDPMPSPEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DH++IG F+S K + Sbjct: 192 TLTKRLVEAGELMGIEVLDHLVIGDGRFISLKEHGYM 228 >gi|223041556|ref|ZP_03611757.1| DNA repair protein RadC-like protein [Actinobacillus minor 202] gi|223017651|gb|EEF16061.1| DNA repair protein RadC-like protein [Actinobacillus minor 202] Length = 221 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 60/96 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LI E GTI+ V+ RE+++ L+ +A +II+ HNHPSG PS+AD Sbjct: 123 LFLDNQNRLIRTEKMFFGTINQASVHPREVIKAALKCNAAAIIIAHNHPSGECTPSEADR 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ I + ++I DHII+GK + SF+ ++ Sbjct: 183 HLTRRIEMACSLVDIRFVDHIIVGKGDYFSFEEEKL 218 >gi|254490370|ref|ZP_05103559.1| DNA repair protein RadC [Methylophaga thiooxidans DMS010] gi|224464503|gb|EEF80763.1| DNA repair protein RadC [Methylophaga thiooxydans DMS010] Length = 224 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA E RGTID VY RE+V++ L+ +A ++I HNHPSG PS ADI Sbjct: 128 LFLDNQHRMIAFEELFRGTIDGASVYPREVVKQALQHNAAAVIFAHNHPSGVAEPSQADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + L ++I V DHII+G D +S L I Sbjct: 188 HITRRLKSALELVDIRVLDHIIVGDDEPISMAQLGQI 224 >gi|156936195|ref|YP_001440111.1| hypothetical protein ESA_04094 [Cronobacter sakazakii ATCC BAA-894] gi|156534449|gb|ABU79275.1| hypothetical protein ESA_04094 [Cronobacter sakazakii ATCC BAA-894] Length = 255 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N +I GT+ HV V+ REIV+ + L+A IIL HNHPSG PS AD Sbjct: 159 IFLDSQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADK 218 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ + ++I V DH++IG+ +VSF I Sbjct: 219 MVTERIVKSCQLVDIRVLDHLVIGRGEYVSFAERGWI 255 >gi|120556469|ref|YP_960820.1| DNA repair protein RadC [Marinobacter aquaeolei VT8] gi|166218785|sp|A1U6L4|Y3564_MARAV RecName: Full=UPF0758 protein Maqu_3564 gi|120326318|gb|ABM20633.1| DNA replication and repair protein RadC [Marinobacter aquaeolei VT8] Length = 224 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I RGTID VY RE+V++ LE +A ++I HNHPSG PS ADI Sbjct: 128 LFLDNRHRVIQYRELFRGTIDGAAVYPREVVRQALEDNAAAVIFAHNHPSGVAEPSQADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L ++I V DH++IG +S ++ Sbjct: 188 SLTRRLKEALGLVDIRVLDHMVIGHGEVISLAERGLM 224 >gi|330431915|gb|AEC16974.1| DNA repair protein RadC [Gallibacterium anatis UMN179] Length = 221 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ + LI E +GTI+ V+ REI++ L+ +A +IIL HNHPSG PS DI Sbjct: 122 LFLNNQHYLIEKETLFQGTINSTQVHPREIIKSALKYNAAAIILAHNHPSGITTPSKEDI 181 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I +++ V DH+IIGK+ SF +I Sbjct: 182 AVTEQIQQACKLIDVRVLDHLIIGKNQVFSFCEKGLI 218 >gi|153214270|ref|ZP_01949287.1| DNA repair protein RadC, putative [Vibrio cholerae 1587] gi|124115418|gb|EAY34238.1| DNA repair protein RadC, putative [Vibrio cholerae 1587] Length = 158 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI + RGT+D VY RE+++ L ++A ++I HNHPSG+P PS AD Sbjct: 63 LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ ++I V DH+++GK + VSF + Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 158 >gi|240948237|ref|ZP_04752623.1| DNA repair protein RadC [Actinobacillus minor NM305] gi|240297276|gb|EER47817.1| DNA repair protein RadC [Actinobacillus minor NM305] Length = 221 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LI E GTI+ V+ RE+++ L+ +A +II+ HNHPSG PS+AD Sbjct: 123 LFLDNQNRLIRTEKMFFGTINQASVHPREVIKAALKCNAAAIIIAHNHPSGECTPSEADR 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ I ++I DHII+GK + SF+ ++ Sbjct: 183 HLTRRIEMACGLVDIRFVDHIIVGKGDYFSFEEEKL 218 >gi|307546416|ref|YP_003898895.1| DNA repair protein RadC [Halomonas elongata DSM 2581] gi|307218440|emb|CBV43710.1| DNA repair protein RadC [Halomonas elongata DSM 2581] Length = 224 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E RGT+D VY RE+ +R LEL A ++I HNHPSG PSDAD Sbjct: 128 LFLDSQHRVIRYESLFRGTLDSASVYPREVARRALELGAGALIFAHNHPSGVAEPSDADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L + V DH ++G VSF ++ Sbjct: 188 RITERLRQALELFEVRVLDHFVVGDGEVVSFAERGLL 224 >gi|327480970|gb|AEA84280.1| RadC family DNA repair protein [Pseudomonas stutzeri DSM 4166] Length = 168 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI RGTID VY RE+V+ L L+A ++I HNHPSGNP PS AD Sbjct: 72 LFLDAKHRLIQYVEMFRGTIDSASVYPREVVKEALRLNAAAVIFAHNHPSGNPEPSQADK 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ DH+I+ VSF ++ Sbjct: 132 VLTQRLKEALALVDVRSLDHVIVAGQRTVSFAERGLL 168 >gi|167832541|gb|ACA01849.1| DNA repair protein RadC [Vibrio cholerae] Length = 169 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI + RGT+D VY RE+++ L ++A ++I HNHPSG+P PS AD Sbjct: 74 LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 133 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ ++I V DH+++GK + VSF + Sbjct: 134 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 169 >gi|261494189|ref|ZP_05990691.1| DNA repair protein RadC [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495585|ref|ZP_05992031.1| DNA repair protein RadC [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308692|gb|EEY09949.1| DNA repair protein RadC [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310170|gb|EEY11371.1| DNA repair protein RadC [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 245 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 61/96 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LI E GTI+ V+ REI++R L+ +A +II+ HNHPSG+ PS++D Sbjct: 136 LFLDNQNRLIYKEKMFFGTINQTAVHPREIIKRALKYNAAAIIVAHNHPSGSCLPSESDR 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ I ++I DHII+GK + SF+ ++ Sbjct: 196 SLTKKIEMACELVDIRFVDHIIVGKGDYFSFEEEKL 231 >gi|15641789|ref|NP_231421.1| DNA repair protein RadC, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585864|ref|ZP_01675658.1| DNA repair protein RadC, putative [Vibrio cholerae 2740-80] gi|147674352|ref|YP_001217326.1| putative DNA repair protein RadC [Vibrio cholerae O395] gi|153817804|ref|ZP_01970471.1| DNA repair protein RadC, putative [Vibrio cholerae NCTC 8457] gi|153821150|ref|ZP_01973817.1| DNA repair protein RadC, putative [Vibrio cholerae B33] gi|153828539|ref|ZP_01981206.1| putative DNA repair protein RadC [Vibrio cholerae 623-39] gi|227081931|ref|YP_002810482.1| putative DNA repair protein RadC [Vibrio cholerae M66-2] gi|229508112|ref|ZP_04397617.1| DNA repair protein RadC [Vibrio cholerae BX 330286] gi|229511649|ref|ZP_04401128.1| DNA repair protein RadC [Vibrio cholerae B33] gi|229518788|ref|ZP_04408231.1| DNA repair protein RadC [Vibrio cholerae RC9] gi|229607673|ref|YP_002878321.1| DNA repair protein RadC [Vibrio cholerae MJ-1236] gi|255744800|ref|ZP_05418750.1| DNA repair protein RadC [Vibrio cholera CIRS 101] gi|262161917|ref|ZP_06030935.1| DNA repair protein RadC [Vibrio cholerae INDRE 91/1] gi|262169785|ref|ZP_06037476.1| DNA repair protein RadC [Vibrio cholerae RC27] gi|13432022|sp|Q9KR57|Y1786_VIBCH RecName: Full=UPF0758 protein VC_1786 gi|9656311|gb|AAF94935.1| DNA repair protein RadC, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121550002|gb|EAX60020.1| DNA repair protein RadC, putative [Vibrio cholerae 2740-80] gi|126511624|gb|EAZ74218.1| DNA repair protein RadC, putative [Vibrio cholerae NCTC 8457] gi|126521346|gb|EAZ78569.1| DNA repair protein RadC, putative [Vibrio cholerae B33] gi|146316235|gb|ABQ20774.1| putative DNA repair protein RadC [Vibrio cholerae O395] gi|148875934|gb|EDL74069.1| putative DNA repair protein RadC [Vibrio cholerae 623-39] gi|227009819|gb|ACP06031.1| putative DNA repair protein RadC [Vibrio cholerae M66-2] gi|227013686|gb|ACP09896.1| putative DNA repair protein RadC [Vibrio cholerae O395] gi|229343477|gb|EEO08452.1| DNA repair protein RadC [Vibrio cholerae RC9] gi|229351614|gb|EEO16555.1| DNA repair protein RadC [Vibrio cholerae B33] gi|229355617|gb|EEO20538.1| DNA repair protein RadC [Vibrio cholerae BX 330286] gi|229370328|gb|ACQ60751.1| DNA repair protein RadC [Vibrio cholerae MJ-1236] gi|255737271|gb|EET92666.1| DNA repair protein RadC [Vibrio cholera CIRS 101] gi|262022019|gb|EEY40729.1| DNA repair protein RadC [Vibrio cholerae RC27] gi|262028649|gb|EEY47304.1| DNA repair protein RadC [Vibrio cholerae INDRE 91/1] Length = 158 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI + RGT+D VY RE+++ L ++A ++I HNHPSG+P PS AD Sbjct: 63 LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ ++I V DH+++GK + VSF + Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 158 >gi|253690461|ref|YP_003019651.1| DNA repair protein RadC [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259551881|sp|C6DIC1|Y4100_PECCP RecName: Full=UPF0758 protein PC1_4100 gi|251757039|gb|ACT15115.1| DNA repair protein RadC [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 221 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I + GTI+ V V+ REIV+ L+ +A ++IL HNHPSG PS AD Sbjct: 125 LFLDNQHHVIRHQEMFVGTINSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ + I V DH++IG +VSF I Sbjct: 185 AITEQIVKACLLMEIRVLDHLVIGHGEYVSFAERGWI 221 >gi|267995990|gb|ACY90875.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] Length = 279 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT++HV V+ REIV+ ++L+A+++IL HNHPSG PS AD Sbjct: 183 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 242 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I ++I V DH+IIG+ +VSF I Sbjct: 243 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 279 >gi|193071485|ref|ZP_03052397.1| DNA repair protein, RadC family [Escherichia coli E110019] gi|331668227|ref|ZP_08369078.1| putative DNA repair protein [Escherichia coli TA271] gi|192955207|gb|EDV85698.1| DNA repair protein, RadC family [Escherichia coli E110019] gi|331064545|gb|EGI36453.1| putative DNA repair protein [Escherichia coli TA271] Length = 158 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|281179100|dbj|BAI55430.1| conserved hypothetical protein [Escherichia coli SE15] Length = 163 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 163 >gi|254427947|ref|ZP_05041654.1| DNA repair protein RadC [Alcanivorax sp. DG881] gi|196194116|gb|EDX89075.1| DNA repair protein RadC [Alcanivorax sp. DG881] Length = 224 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E +GTID VY RE+V+R +E +A ++IL HNHPSG PS +D Sbjct: 128 LFLDNKHRLIAFEKLFQGTIDAAAVYPREVVRRAMEHNAAAVILAHNHPSGVAEPSQSDH 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L + + V DH++IG +VS + Sbjct: 188 AITRRLVEALGLVEVRVLDHLVIGDGGWVSLASRGAL 224 >gi|331677904|ref|ZP_08378579.1| putative DNA repair protein [Escherichia coli H591] gi|195183284|dbj|BAG66823.1| conserved predicted protein [Escherichia coli O111:H-] gi|323936899|gb|EGB33182.1| DNA repair protein RadC [Escherichia coli E1520] gi|323938740|gb|EGB34987.1| DNA repair protein RadC [Escherichia coli E1520] gi|331074364|gb|EGI45684.1| putative DNA repair protein [Escherichia coli H591] Length = 163 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 163 >gi|187939929|gb|ACD39066.1| RadC family DNA repair protein [Pseudomonas aeruginosa] Length = 169 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI RGTID VY RE+V+ L L+A ++I+ HNHPSGNP PS AD Sbjct: 73 LFLDTQHRLIEYSELFRGTIDSASVYPRELVKEALRLNAAAVIVSHNHPSGNPEPSGADK 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ DHII+ + +SF +I Sbjct: 133 VLTQRLREALALVDVRTLDHIIVAGGSTISFAERGLI 169 >gi|157149255|ref|YP_001456574.1| DNA repair protein RadC [Citrobacter koseri ATCC BAA-895] gi|166218775|sp|A8ARM5|Y5095_CITK8 RecName: Full=UPF0758 protein CKO_05095 gi|157086460|gb|ABV16138.1| hypothetical protein CKO_05095 [Citrobacter koseri ATCC BAA-895] Length = 220 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++L+A+++IL HNHPSG PS AD Sbjct: 124 IFLDARHRVIKHSRLFSGTLNHVEVHPREIIREAIKLNASAVILAHNHPSGCAEPSKADK 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ ++I V DH++IG+ +VSF I Sbjct: 184 LITERVVKCCQFMDIRVLDHLVIGRGEYVSFAERGWI 220 >gi|161616810|ref|YP_001590774.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|161366174|gb|ABX69942.1| hypothetical protein SPAB_04629 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 279 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT++HV V+ REIV+ ++ +A+++IL HNHPSG PS AD Sbjct: 183 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKFNASAVILAHNHPSGCAEPSKADK 242 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I ++I V DH+IIG+ +VSF I Sbjct: 243 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 279 >gi|149376403|ref|ZP_01894165.1| DNA repair protein RadC [Marinobacter algicola DG893] gi|149359244|gb|EDM47706.1| DNA repair protein RadC [Marinobacter algicola DG893] Length = 224 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I + RGTID VY RE+V++ LE +A ++I HNHPSG PS +DI Sbjct: 128 LFLDNRHRVIRYQELFRGTIDGAAVYPREVVRQALEFNAAAVIFAHNHPSGVAEPSQSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L ++I V DH+++G +S ++ Sbjct: 188 SLTRRLKEALGLVDIRVLDHMVVGHGEVISLAERGLM 224 >gi|188025457|ref|ZP_02958709.2| hypothetical protein PROSTU_00459 [Providencia stuartii ATCC 25827] gi|188023530|gb|EDU61570.1| hypothetical protein PROSTU_00459 [Providencia stuartii ATCC 25827] Length = 222 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ + +I+ E RGTI+ V V+ REI++ ++++A++IIL HNHPSGNP PSDAD Sbjct: 126 LFLNNQHQIISYEELFRGTINRVEVHPREIIRFAMKMNASAIILAHNHPSGNPEPSDADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I + I + DH ++G VSF + Sbjct: 186 QVTFRIKEACTLMGIKLLDHFVVGHKNCVSFLERGWL 222 >gi|126732884|ref|ZP_01748675.1| DNA repair protein RadC [Sagittula stellata E-37] gi|126706660|gb|EBA05734.1| DNA repair protein RadC [Sagittula stellata E-37] Length = 252 Score = 136 bits (344), Expect = 7e-31, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI Sbjct: 156 LYLDRKNVLIADERQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSAADI 215 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT I + I+VHDH++IGK +SF+ ++ Sbjct: 216 DMTVQIQAAAEVMGIVVHDHLVIGKSRELSFRSEGLL 252 >gi|261823583|ref|YP_003261689.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163] gi|261607596|gb|ACX90082.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163] Length = 221 Score = 136 bits (344), Expect = 7e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I + GTI+ V V+ REIV+ L+ +A ++IL HNHPSG PS AD Sbjct: 125 LFLDNQHHVIRHQEMFVGTINSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ + I V DH++IG +VSF I Sbjct: 185 AITEQIVKACLLMEIRVLDHLVIGHGEYVSFAERGWI 221 >gi|153214714|ref|ZP_01949559.1| DNA repair protein RadC [Vibrio cholerae 1587] gi|124115150|gb|EAY33970.1| DNA repair protein RadC [Vibrio cholerae 1587] Length = 109 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GTID VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 13 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 72 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L + I V DH ++G VSF I Sbjct: 73 RITDRLRDALGLVEIRVLDHFVVGDGEVVSFAERGWI 109 >gi|229515195|ref|ZP_04404655.1| DNA repair protein RadC [Vibrio cholerae TMA 21] gi|229347900|gb|EEO12859.1| DNA repair protein RadC [Vibrio cholerae TMA 21] Length = 158 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI + RGT+D VY RE+++ L ++A ++I HNHPSG+P PS AD Sbjct: 63 LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFTHNHPSGDPEPSQADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ ++I V DH+++GK + VSF + Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 158 >gi|225852775|ref|YP_002733008.1| DNA repair protein RadC [Brucella melitensis ATCC 23457] gi|256263739|ref|ZP_05466271.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|254764429|sp|C0RJP6|Y1330_BRUMB RecName: Full=UPF0758 protein BMEA_A1330 gi|225641140|gb|ACO01054.1| DNA repair protein RadC [Brucella melitensis ATCC 23457] gi|263093798|gb|EEZ17803.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|326409305|gb|ADZ66370.1| DNA repair protein RadC [Brucella melitensis M28] gi|326539014|gb|ADZ87229.1| DNA repair protein RadC [Brucella melitensis M5-90] Length = 249 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 63/97 (64%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ ++ LNI VHDH+IIGK S + LR+I Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLRSLRLI 249 >gi|187733812|ref|YP_001879774.1| DNA repair protein, RadC family [Shigella boydii CDC 3083-94] gi|187430804|gb|ACD10078.1| DNA repair protein, RadC family [Shigella boydii CDC 3083-94] Length = 158 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|126738441|ref|ZP_01754146.1| DNA repair protein RadC [Roseobacter sp. SK209-2-6] gi|126720240|gb|EBA16946.1| DNA repair protein RadC [Roseobacter sp. SK209-2-6] Length = 258 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 56/97 (57%), Positives = 74/97 (76%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADE Q+ GT+DHVPVY RE+V+R LE +A ++ILVHNHPSG+P+PS +DI Sbjct: 162 LFLDRKNRLIADEEQAEGTVDHVPVYPREVVKRALEHNACALILVHNHPSGDPSPSQSDI 221 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I L+PL I +HDH+IIG A +SF+ ++ Sbjct: 222 EMTDRIHRALHPLGIALHDHLIIGSSAELSFRSEGLL 258 >gi|17987001|ref|NP_539635.1| DNA repair protein RadC [Brucella melitensis bv. 1 str. 16M] gi|23502159|ref|NP_698286.1| DNA repair protein RadC [Brucella suis 1330] gi|62290189|ref|YP_221982.1| DNA repair protein RadC [Brucella abortus bv. 1 str. 9-941] gi|82700110|ref|YP_414684.1| DNA repair protein RadC [Brucella melitensis biovar Abortus 2308] gi|161619234|ref|YP_001593121.1| DNA repair protein RadC [Brucella canis ATCC 23365] gi|189024423|ref|YP_001935191.1| DNA repair protein RadC [Brucella abortus S19] gi|225627749|ref|ZP_03785786.1| DNA repair protein RadC [Brucella ceti str. Cudo] gi|237815696|ref|ZP_04594693.1| DNA repair protein RadC [Brucella abortus str. 2308 A] gi|254689493|ref|ZP_05152747.1| DNA repair protein RadC [Brucella abortus bv. 6 str. 870] gi|254693980|ref|ZP_05155808.1| DNA repair protein RadC [Brucella abortus bv. 3 str. Tulya] gi|254697631|ref|ZP_05159459.1| DNA repair protein RadC [Brucella abortus bv. 2 str. 86/8/59] gi|254702017|ref|ZP_05163845.1| DNA repair protein RadC [Brucella suis bv. 5 str. 513] gi|254704558|ref|ZP_05166386.1| DNA repair protein RadC [Brucella suis bv. 3 str. 686] gi|254710344|ref|ZP_05172155.1| DNA repair protein RadC [Brucella pinnipedialis B2/94] gi|254714340|ref|ZP_05176151.1| DNA repair protein RadC [Brucella ceti M644/93/1] gi|254717239|ref|ZP_05179050.1| DNA repair protein RadC [Brucella ceti M13/05/1] gi|254730521|ref|ZP_05189099.1| DNA repair protein RadC [Brucella abortus bv. 4 str. 292] gi|256031838|ref|ZP_05445452.1| DNA repair protein RadC [Brucella pinnipedialis M292/94/1] gi|256044923|ref|ZP_05447826.1| DNA repair protein RadC [Brucella melitensis bv. 1 str. Rev.1] gi|256061358|ref|ZP_05451502.1| DNA repair protein RadC [Brucella neotomae 5K33] gi|256113838|ref|ZP_05454631.1| DNA repair protein RadC [Brucella melitensis bv. 3 str. Ether] gi|256257741|ref|ZP_05463277.1| DNA repair protein RadC [Brucella abortus bv. 9 str. C68] gi|256369702|ref|YP_003107212.1| DNA repair protein RadC [Brucella microti CCM 4915] gi|260168972|ref|ZP_05755783.1| DNA repair protein RadC [Brucella sp. F5/99] gi|260546732|ref|ZP_05822471.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260565477|ref|ZP_05835961.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|260566199|ref|ZP_05836669.1| DNA repair protein RadC [Brucella suis bv. 4 str. 40] gi|260755015|ref|ZP_05867363.1| DNA repair protein RadC [Brucella abortus bv. 6 str. 870] gi|260758231|ref|ZP_05870579.1| DNA repair protein RadC [Brucella abortus bv. 4 str. 292] gi|260762058|ref|ZP_05874401.1| DNA repair protein RadC [Brucella abortus bv. 2 str. 86/8/59] gi|260884026|ref|ZP_05895640.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261214271|ref|ZP_05928552.1| DNA repair protein RadC [Brucella abortus bv. 3 str. Tulya] gi|261219056|ref|ZP_05933337.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261317907|ref|ZP_05957104.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261322116|ref|ZP_05961313.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261325359|ref|ZP_05964556.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261752583|ref|ZP_05996292.1| DNA repair protein RadC [Brucella suis bv. 5 str. 513] gi|261755242|ref|ZP_05998951.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|261758465|ref|ZP_06002174.1| DNA repair protein RadC [Brucella sp. F5/99] gi|265988936|ref|ZP_06101493.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265991349|ref|ZP_06103906.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|265995186|ref|ZP_06107743.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|294852618|ref|ZP_06793291.1| DNA repair protein radC [Brucella sp. NVSL 07-0026] gi|297248579|ref|ZP_06932297.1| DNA repair protein radC [Brucella abortus bv. 5 str. B3196] gi|306840253|ref|ZP_07473027.1| DNA repair protein RadC [Brucella sp. BO2] gi|306844186|ref|ZP_07476779.1| DNA repair protein RadC [Brucella sp. BO1] gi|54039000|sp|P65956|Y1283_BRUSU RecName: Full=UPF0758 protein BR1283 gi|54041782|sp|P65955|Y718_BRUME RecName: Full=UPF0758 protein BMEI0718 gi|73913733|sp|Q57CL3|Y1284_BRUAB RecName: Full=UPF0758 protein BruAb1_1284 gi|123547434|sp|Q2YRF9|Y1301_BRUA2 RecName: Full=UPF0758 protein BAB1_1301 gi|238687216|sp|A9M5U5|Y1306_BRUC2 RecName: Full=UPF0758 protein BCAN_A1306 gi|238689385|sp|B2S6C0|Y1214_BRUA1 RecName: Full=UPF0758 protein BAbS19_I12140 gi|17982652|gb|AAL51899.1| DNA repair protein radc homolog [Brucella melitensis bv. 1 str. 16M] gi|23348123|gb|AAN30201.1| DNA repair protein RadC [Brucella suis 1330] gi|62196321|gb|AAX74621.1| RadC, DNA repair protein RadC [Brucella abortus bv. 1 str. 9-941] gi|82616211|emb|CAJ11257.1| DNA repair protein RadC [Brucella melitensis biovar Abortus 2308] gi|161336045|gb|ABX62350.1| DNA repair protein RadC [Brucella canis ATCC 23365] gi|189019995|gb|ACD72717.1| DNA repair protein RadC [Brucella abortus S19] gi|225617754|gb|EEH14799.1| DNA repair protein RadC [Brucella ceti str. Cudo] gi|237788994|gb|EEP63205.1| DNA repair protein RadC [Brucella abortus str. 2308 A] gi|255999864|gb|ACU48263.1| DNA repair protein RadC [Brucella microti CCM 4915] gi|260095782|gb|EEW79659.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260151545|gb|EEW86639.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|260155717|gb|EEW90797.1| DNA repair protein RadC [Brucella suis bv. 4 str. 40] gi|260668549|gb|EEX55489.1| DNA repair protein RadC [Brucella abortus bv. 4 str. 292] gi|260672490|gb|EEX59311.1| DNA repair protein RadC [Brucella abortus bv. 2 str. 86/8/59] gi|260675123|gb|EEX61944.1| DNA repair protein RadC [Brucella abortus bv. 6 str. 870] gi|260873554|gb|EEX80623.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260915878|gb|EEX82739.1| DNA repair protein RadC [Brucella abortus bv. 3 str. Tulya] gi|260924145|gb|EEX90713.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261294806|gb|EEX98302.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261297130|gb|EEY00627.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261301339|gb|EEY04836.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261738449|gb|EEY26445.1| DNA repair protein RadC [Brucella sp. F5/99] gi|261742336|gb|EEY30262.1| DNA repair protein RadC [Brucella suis bv. 5 str. 513] gi|261744995|gb|EEY32921.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|262766299|gb|EEZ12088.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263002133|gb|EEZ14708.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|264661133|gb|EEZ31394.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|294821207|gb|EFG38206.1| DNA repair protein radC [Brucella sp. NVSL 07-0026] gi|297175748|gb|EFH35095.1| DNA repair protein radC [Brucella abortus bv. 5 str. B3196] gi|306275461|gb|EFM57198.1| DNA repair protein RadC [Brucella sp. BO1] gi|306289780|gb|EFM60962.1| DNA repair protein RadC [Brucella sp. BO2] Length = 249 Score = 136 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 63/97 (64%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ ++ LNI VHDH+IIGK S + LR+I Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLRSLRLI 249 >gi|163843546|ref|YP_001627950.1| DNA repair protein RadC [Brucella suis ATCC 23445] gi|163674269|gb|ABY38380.1| DNA repair protein RadC [Brucella suis ATCC 23445] Length = 249 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 63/97 (64%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ ++ LNI VHDH+IIGK S + LR+I Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLRSLRLI 249 >gi|283856582|ref|YP_003377816.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4] gi|283775591|gb|ADB28982.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4] Length = 169 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI GTID PVY RE+V+ L L+A ++IL HNHPSGNP PS AD Sbjct: 73 LFLDTRHRLIEYREMFHGTIDSAPVYPREVVKEALRLNAAAVILSHNHPSGNPEPSQADR 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH+I+ SF +I Sbjct: 133 VLTQRLKKALGLVDMRVLDHVIVAGSTTESFAERGLI 169 >gi|254719330|ref|ZP_05181141.1| DNA repair protein RadC [Brucella sp. 83/13] gi|265984331|ref|ZP_06097066.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306839105|ref|ZP_07471922.1| DNA repair protein RadC [Brucella sp. NF 2653] gi|264662923|gb|EEZ33184.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306405652|gb|EFM61914.1| DNA repair protein RadC [Brucella sp. NF 2653] Length = 249 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 63/97 (64%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ ++ LNI VHDH+IIGK S + LR+I Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLRSLRLI 249 >gi|238783986|ref|ZP_04628002.1| DNA repair protein radC [Yersinia bercovieri ATCC 43970] gi|238715094|gb|EEQ07090.1| DNA repair protein radC [Yersinia bercovieri ATCC 43970] Length = 249 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I E GTI V V+ REIV+ L+ +A ++IL HNHPSG PS AD Sbjct: 153 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKANAAALILAHNHPSGRAEPSQADR 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MTQ +I + L+I V DH+++G+ VSF + Sbjct: 213 LMTQQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 249 >gi|218692705|ref|YP_002400917.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli ED1a] gi|218430269|emb|CAR11137.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli ED1a] Length = 163 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 163 >gi|154253040|ref|YP_001413864.1| DNA repair protein RadC [Parvibaculum lavamentivorans DS-1] gi|154156990|gb|ABS64207.1| DNA repair protein RadC [Parvibaculum lavamentivorans DS-1] Length = 230 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+LIADEVQ +GT+DH PVY RE+V+R LEL+A+++ILVHNHPSG+P PS AD+ Sbjct: 134 LFLDRKNVLIADEVQQKGTVDHTPVYPREVVKRALELNASALILVHNHPSGDPTPSTADV 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I+ T PL I VHDH+++GK SF+ L +I Sbjct: 194 EMTRQIVNTAKPLGIEVHDHLVVGKGRHASFRTLGLI 230 >gi|170683005|ref|YP_001745192.1| RadC family DNA repair protein [Escherichia coli SMS-3-5] gi|170520723|gb|ACB18901.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5] Length = 158 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|271498728|ref|YP_003331753.1| DNA repair protein RadC [Dickeya dadantii Ech586] gi|270342283|gb|ACZ75048.1| DNA repair protein RadC [Dickeya dadantii Ech586] Length = 221 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I + GTI V V+ REIV+ L+++A ++IL HNHPSG PS AD Sbjct: 125 MFLDNQHRVICHQEMFAGTISRVEVHPREIVREALKVNAAALILAHNHPSGRAEPSQADR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ I+ + I V DH++IG+ +VSF + Sbjct: 185 SITEKIVQACQLMEIRVLDHLVIGRGEYVSFAERGWL 221 >gi|188495664|ref|ZP_03002934.1| DNA repair protein, RadC family [Escherichia coli 53638] gi|193062199|ref|ZP_03043295.1| DNA repair protein, RadC family [Escherichia coli E22] gi|193062945|ref|ZP_03044038.1| DNA repair protein, RadC family [Escherichia coli E22] gi|256023420|ref|ZP_05437285.1| DNA repair protein [Escherichia sp. 4_1_40B] gi|260844612|ref|YP_003222390.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009] gi|260856468|ref|YP_003230359.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368] gi|260868651|ref|YP_003235053.1| putative DNA repair protein [Escherichia coli O111:H- str. 11128] gi|300824768|ref|ZP_07104873.1| putative DNA repair protein RadC [Escherichia coli MS 119-7] gi|312973758|ref|ZP_07787930.1| DNA repair RadC family protein [Escherichia coli 1827-70] gi|188490863|gb|EDU65966.1| DNA repair protein, RadC family [Escherichia coli 53638] gi|192931588|gb|EDV84189.1| DNA repair protein, RadC family [Escherichia coli E22] gi|192932419|gb|EDV85017.1| DNA repair protein, RadC family [Escherichia coli E22] gi|226237408|dbj|BAH46930.1| predicted DNA repair protein [Escherichia coli O55:H7] gi|257755117|dbj|BAI26619.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368] gi|257759759|dbj|BAI31256.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009] gi|257765007|dbj|BAI36502.1| putative DNA repair protein [Escherichia coli O111:H- str. 11128] gi|300522755|gb|EFK43824.1| putative DNA repair protein RadC [Escherichia coli MS 119-7] gi|310332353|gb|EFP99588.1| DNA repair RadC family protein [Escherichia coli 1827-70] gi|323156365|gb|EFZ42522.1| DNA repair RadC family protein [Escherichia coli EPECa14] gi|323177162|gb|EFZ62752.1| DNA repair protein RadC family protein [Escherichia coli 1180] gi|330911842|gb|EGH40352.1| putative DNA repair protein [Escherichia coli AA86] gi|332092379|gb|EGI97452.1| DNA repair protein RadC family protein [Shigella boydii 5216-82] Length = 158 Score = 136 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|229520275|ref|ZP_04409701.1| DNA repair protein RadC [Vibrio cholerae TM 11079-80] gi|229342641|gb|EEO07633.1| DNA repair protein RadC [Vibrio cholerae TM 11079-80] Length = 158 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI + RGT+D VY RE+++ L ++A ++I HNHPSG+P PS AD Sbjct: 63 LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ ++I V DH+++GK + VSF + Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 158 >gi|254850972|ref|ZP_05240322.1| DNA repair protein [Vibrio cholerae MO10] gi|21885298|gb|AAL59704.1| putative DNA repair radC [Vibrio cholerae] gi|254846677|gb|EET25091.1| DNA repair protein [Vibrio cholerae MO10] gi|259156323|gb|ACV96269.1| DNA repair protein RadC [Vibrio cholerae Ind4] gi|259156536|gb|ACV96480.1| DNA repair protein RadC [Vibrio cholerae Mex1] Length = 165 Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E +GT+D VY RE+ +R LEL+A ++ILVHNHPSG+P PS+AD Sbjct: 69 LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNAAAVILVHNHPSGDPEPSEADK 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L+ ++I DH+++ + VS + Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSLAERGYL 165 >gi|26249506|ref|NP_755546.1| putative radC-like protein yeeS [Escherichia coli CFT073] gi|301017434|ref|ZP_07182164.1| putative DNA repair protein RadC [Escherichia coli MS 69-1] gi|26109914|gb|AAN82119.1|AE016766_207 Putative radC-like protein yeeS [Escherichia coli CFT073] gi|291291731|gb|ADD91702.1| YeeS [Escherichia coli] gi|300400214|gb|EFJ83752.1| putative DNA repair protein RadC [Escherichia coli MS 69-1] gi|323960166|gb|EGB55809.1| DNA repair protein RadC [Escherichia coli H489] gi|332102586|gb|EGJ05932.1| YeeS protein [Shigella sp. D9] Length = 163 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 163 >gi|197286286|ref|YP_002152158.1| plasmid-related DNA repair protein [Proteus mirabilis HI4320] gi|194683773|emb|CAR44822.1| putative plasmid-related DNA repair protein [Proteus mirabilis HI4320] Length = 165 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E +GT+D VY RE+ +R LE +A ++ILVHNHPSG+P PS+AD Sbjct: 69 LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALEFNAAAVILVHNHPSGDPEPSEADK 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L+ ++I DH+++ + VS + Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSLAERGYL 165 >gi|254470509|ref|ZP_05083913.1| DNA repair protein RadC [Pseudovibrio sp. JE062] gi|211960820|gb|EEA96016.1| DNA repair protein RadC [Pseudovibrio sp. JE062] Length = 275 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 63/97 (64%), Positives = 74/97 (76%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+ +R LELSA +IILVHNHPSG+P PS DI Sbjct: 179 LFLDKKNRLIADEVQQTGTVDHTPVYPREVTKRALELSACAIILVHNHPSGDPTPSRQDI 238 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I +TL PL I++HDHIII VSF+GL++I Sbjct: 239 EMTTKIASTLEPLGIVLHDHIIIAGSGHVSFRGLQLI 275 >gi|57434429|emb|CAI43846.1| YeeS protein [Escherichia coli] Length = 163 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 163 >gi|315633557|ref|ZP_07888847.1| DNA repair protein RadC [Aggregatibacter segnis ATCC 33393] gi|315477599|gb|EFU68341.1| DNA repair protein RadC [Aggregatibacter segnis ATCC 33393] Length = 232 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY RE+++ L +A +IIL HNHPSG PS +D Sbjct: 136 LFLDNQHRLIKQERLFLGTINKAMVYPREVIKEALACNAAAIILAHNHPSGVAEPSFSDR 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH +IGK + SF ++ Sbjct: 196 QITETIKQAAELVEIRVLDHFVIGKGNYFSFAEQNLL 232 >gi|284924227|emb|CBG37327.1| putative plasmid-related protein [Escherichia coli 042] Length = 163 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 163 >gi|304399017|ref|ZP_07380886.1| DNA repair protein RadC [Pantoea sp. aB] gi|304353477|gb|EFM17855.1| DNA repair protein RadC [Pantoea sp. aB] Length = 218 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ + G+I+ V V+ REIV+ L+L+A ++IL HNHPSG PS AD Sbjct: 122 LFLDNQHRVLRAQNMFSGSINSVEVHPREIVREALKLNAAALILAHNHPSGMAEPSRADR 181 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + +I + DH++IG +VSF + Sbjct: 182 EVTHKVSEACQLFDIRLLDHLVIGHGEYVSFAERGWL 218 >gi|307556532|gb|ADN49307.1| DNA repair protein [Escherichia coli ABU 83972] Length = 158 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|323971802|gb|EGB67027.1| DNA repair protein RadC [Escherichia coli TA007] Length = 158 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|293416392|ref|ZP_06659031.1| radC-like protein yeeS [Escherichia coli B185] gi|291431748|gb|EFF04731.1| radC-like protein yeeS [Escherichia coli B185] Length = 158 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|300818066|ref|ZP_07098279.1| putative DNA repair protein RadC [Escherichia coli MS 107-1] gi|301330444|ref|ZP_07223068.1| putative DNA repair protein RadC [Escherichia coli MS 78-1] gi|47155002|emb|CAE85201.1| YeeS protein [Escherichia coli] gi|300529476|gb|EFK50538.1| putative DNA repair protein RadC [Escherichia coli MS 107-1] gi|300843599|gb|EFK71359.1| putative DNA repair protein RadC [Escherichia coli MS 78-1] Length = 163 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 163 >gi|15808746|gb|AAL08475.1| unknown [Shigella flexneri 2a] gi|281600433|gb|ADA73417.1| putative DNA repair protein [Shigella flexneri 2002017] Length = 163 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 163 >gi|238898968|ref|YP_002924650.1| associated with replication fork, possible DNA repair protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466728|gb|ACQ68502.1| associated with replication fork, possible DNA repair protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 222 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 45/97 (46%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I+ E GTID V V+ RE++++ L ++A +IIL HNHPSG P PS AD Sbjct: 126 LFLNNKNRVISYEELFSGTIDTVEVHPREVLRKALTVNAAAIILAHNHPSGEPEPSQADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T II L+I V DHI+IG VSF I Sbjct: 186 LITTQIIEASALLDIRVLDHIVIGHGKCVSFAERGWI 222 >gi|237730257|ref|ZP_04560738.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226905796|gb|EEH91714.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 158 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LIA E GTI+ VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 62 LYLDNQNQLIAHETLFSGTINRTEVYPREVVKRALYFNAAAVILAHNHPSGETTPSQADK 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L ++I V DH+I+G SF ++ Sbjct: 122 ALTQRLTQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 >gi|251793907|ref|YP_003008639.1| DNA repair protein RadC [Aggregatibacter aphrophilus NJ8700] gi|247535306|gb|ACS98552.1| DNA repair protein RadC [Aggregatibacter aphrophilus NJ8700] Length = 219 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 123 LFLDTQHRLIKQENLFLGTINQAMVYPREIIKEALACNAAALILAHNHPSGVAEPSFSDR 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+TQ I + I V DH +IG+ + SF ++ Sbjct: 183 NITQKIKQAAELMEIRVLDHFVIGRGCYFSFAEQNLL 219 >gi|171769881|sp|A7MQ95|Y4094_ENTS8 RecName: Full=UPF0758 protein ESA_04094 Length = 230 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N +I GT+ HV V+ REIV+ + L+A IIL HNHPSG PS AD Sbjct: 134 IFLDSQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADK 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ + ++I V DH++IG+ +VSF I Sbjct: 194 MVTERIVKSCQLVDIRVLDHLVIGRGEYVSFAERGWI 230 >gi|15832057|ref|NP_310830.1| DNA repair protein [Escherichia coli O157:H7 str. Sakai] gi|168751564|ref|ZP_02776586.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4113] gi|168758439|ref|ZP_02783446.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4401] gi|168764086|ref|ZP_02789093.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4501] gi|168770321|ref|ZP_02795328.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4486] gi|168777112|ref|ZP_02802119.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4196] gi|168783999|ref|ZP_02809006.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4076] gi|168790206|ref|ZP_02815213.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC869] gi|168801968|ref|ZP_02826975.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC508] gi|193062959|ref|ZP_03044051.1| DNA repair protein, RadC family [Escherichia coli E22] gi|195939516|ref|ZP_03084898.1| putative DNA repair protein [Escherichia coli O157:H7 str. EC4024] gi|208810673|ref|ZP_03252549.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4206] gi|208816945|ref|ZP_03258065.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4045] gi|208819226|ref|ZP_03259546.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4042] gi|209397679|ref|YP_002271174.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4115] gi|217329638|ref|ZP_03445717.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. TW14588] gi|254793710|ref|YP_003078547.1| DNA repair protein [Escherichia coli O157:H7 str. TW14359] gi|291283239|ref|YP_003500057.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str. CB9615] gi|291284324|ref|YP_003501142.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str. CB9615] gi|13362271|dbj|BAB36226.1| putative DNA repair protein [Escherichia coli O157:H7 str. Sakai] gi|187767605|gb|EDU31449.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4196] gi|188014397|gb|EDU52519.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4113] gi|188998741|gb|EDU67727.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4076] gi|189354753|gb|EDU73172.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4401] gi|189360779|gb|EDU79198.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4486] gi|189365845|gb|EDU84261.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4501] gi|189370302|gb|EDU88718.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC869] gi|189375952|gb|EDU94368.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC508] gi|192931218|gb|EDV83820.1| DNA repair protein, RadC family [Escherichia coli E22] gi|208725189|gb|EDZ74896.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4206] gi|208731288|gb|EDZ79977.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4045] gi|208739349|gb|EDZ87031.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4042] gi|209159079|gb|ACI36512.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4115] gi|217317406|gb|EEC25835.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. TW14588] gi|254593110|gb|ACT72471.1| DNA repair protein [Escherichia coli O157:H7 str. TW14359] gi|290763112|gb|ADD57073.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str. CB9615] gi|290764197|gb|ADD58158.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str. CB9615] gi|320188176|gb|EFW62840.1| putative DNA repair protein [Escherichia coli O157:H7 str. EC1212] gi|326338356|gb|EGD62184.1| putative DNA repair protein [Escherichia coli O157:H7 str. 1044] gi|326347123|gb|EGD70856.1| putative DNA repair protein [Escherichia coli O157:H7 str. 1125] Length = 158 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|17547339|ref|NP_520741.1| hypothetical protein RSc2620 [Ralstonia solanacearum GMI1000] gi|17429642|emb|CAD16327.1| probable dna repair radc-like protein [Ralstonia solanacearum GMI1000] Length = 169 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LF+D + LI RGTID VY RE+V+ L L+A ++I+ HNHPSGNP PS AD Sbjct: 73 LFMDTQHRLIEYAEMFRGTIDGASVYPRELVKEALRLNAAAVIVSHNHPSGNPEPSGADR 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH+I+ SF +I Sbjct: 133 ALTQRLKEALGLVDVRVLDHVIVAGTDTTSFAERGLI 169 >gi|21228893|ref|NP_634815.1| DNA repair protein RadC [Methanosarcina mazei Go1] gi|25009023|sp|Q8PTC5|Y2791_METMA RecName: Full=UPF0758 protein MM_2791 gi|20907423|gb|AAM32487.1| DNA repair protein [Methanosarcina mazei Go1] Length = 229 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N ++ +EV S G+++ V+ RE+ + L S+ S+I+VHNHPSG+P+PS DI Sbjct: 132 LYLDTKNQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMVHNHPSGDPSPSREDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I + DHIIIG +VS K + Sbjct: 192 MVTEKLVEGGKLLGIDILDHIIIGDGRYVSLKDEGFV 228 >gi|284922959|emb|CBG36051.1| putative DNA repair protein [Escherichia coli 042] gi|284924496|emb|CBG37630.1| putative RadC-like DNA repair protein [Escherichia coli 042] gi|323939702|gb|EGB35906.1| DNA repair protein RadC [Escherichia coli E482] gi|323961766|gb|EGB57367.1| DNA repair protein RadC [Escherichia coli H489] Length = 163 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163 >gi|309703383|emb|CBJ02722.1| putative RadC DNA repair protein [Escherichia coli ETEC H10407] Length = 158 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|218702486|ref|YP_002410115.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli IAI39] gi|218372472|emb|CAR20348.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli IAI39] Length = 163 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+IIG SF ++ Sbjct: 127 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 163 >gi|323960883|gb|EGB56503.1| DNA repair protein RadC [Escherichia coli H489] Length = 163 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 163 >gi|238754770|ref|ZP_04616122.1| DNA repair protein radC [Yersinia ruckeri ATCC 29473] gi|238707078|gb|EEP99443.1| DNA repair protein radC [Yersinia ruckeri ATCC 29473] Length = 222 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I E GTI V V+ REIV+ L+++A ++IL HNHPSG PS AD Sbjct: 126 MFLDNQHRVIRHEEMFTGTITSVEVHPREIVREALKINAVALILAHNHPSGKAEPSQADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ + L+I V DH+++G+ VSF I Sbjct: 186 LITAQVVKACSLLDIRVLDHLVVGRGECVSFAERGWI 222 >gi|315256374|gb|EFU36342.1| putative DNA repair protein RadC [Escherichia coli MS 85-1] Length = 158 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|300903084|ref|ZP_07121021.1| putative DNA repair protein RadC [Escherichia coli MS 84-1] gi|300404861|gb|EFJ88399.1| putative DNA repair protein RadC [Escherichia coli MS 84-1] Length = 163 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 163 >gi|153802336|ref|ZP_01956922.1| DNA repair protein [Vibrio cholerae MZO-3] gi|124122109|gb|EAY40852.1| DNA repair protein [Vibrio cholerae MZO-3] gi|172051601|emb|CAQ34996.1| hypothetical protein [Photobacterium damselae subsp. piscicida] gi|259156591|gb|ACV96534.1| DNA repair protein RadC [Vibrio fluvialis Ind1] Length = 165 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E +GT+D VY RE+ +R LEL+A ++ILVHNHPSG+P PS+AD Sbjct: 69 LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNAAAVILVHNHPSGDPEPSEADK 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L+ ++I DH+++ + VS + Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSLAERGYL 165 >gi|323175748|gb|EFZ61342.1| DNA repair protein RadC family protein [Escherichia coli 1180] Length = 158 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|152979886|ref|YP_001354241.1| DNA repair protein RadC [Janthinobacterium sp. Marseille] gi|166218783|sp|A6T144|Y2551_JANMA RecName: Full=UPF0758 protein mma_2551 gi|151279963|gb|ABR88373.1| DNA repair protein [Janthinobacterium sp. Marseille] Length = 224 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIA E RGT+ H VY REIV+ L +A S+IL HNHPSG+ PS AD Sbjct: 128 LFLDVKNRLIACEELFRGTLTHTSVYPREIVKEALTHNAASVILAHNHPSGSSEPSAADH 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ + L +++ V DH ++G SF + Sbjct: 188 SLTQALKQALALIDVRVLDHFVVGGKNVYSFAEHGHL 224 >gi|194449680|ref|YP_002048317.1| DNA repair protein, RadC family [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194407984|gb|ACF68203.1| DNA repair protein, RadC family [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] Length = 158 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|157154969|ref|YP_001464407.1| RadC family DNA repair protein [Escherichia coli E24377A] gi|157076999|gb|ABV16707.1| DNA repair protein, RadC family [Escherichia coli E24377A] Length = 158 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|57545665|gb|AAW51756.1| Aec73 [Escherichia coli] Length = 163 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+IIG SF ++ Sbjct: 127 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 163 >gi|331650180|ref|ZP_08351253.1| DNA repair protein RadC [Escherichia coli M605] gi|331041125|gb|EGI13282.1| DNA repair protein RadC [Escherichia coli M605] Length = 163 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+IIG SF ++ Sbjct: 127 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 163 >gi|251791518|ref|YP_003006239.1| DNA repair protein RadC [Dickeya zeae Ech1591] gi|247540139|gb|ACT08760.1| DNA repair protein RadC [Dickeya zeae Ech1591] Length = 221 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I + GTI V V+ REIV+ L +A ++IL HNHPSG PS AD Sbjct: 125 MFLDNQHRVIRHQEMFAGTISSVEVHPREIVREALRANAAALILAHNHPSGRAEPSKADR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I+ L+I V DH++IG+ +VSF I Sbjct: 185 SITGKIVQACQLLDIRVLDHLVIGRGEYVSFAERGWI 221 >gi|301304122|ref|ZP_07210238.1| putative DNA repair protein RadC [Escherichia coli MS 124-1] gi|300840535|gb|EFK68295.1| putative DNA repair protein RadC [Escherichia coli MS 124-1] gi|315252292|gb|EFU32260.1| putative DNA repair protein RadC [Escherichia coli MS 85-1] Length = 163 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 163 >gi|300825335|ref|ZP_07105415.1| putative DNA repair protein RadC [Escherichia coli MS 119-7] gi|300522198|gb|EFK43267.1| putative DNA repair protein RadC [Escherichia coli MS 119-7] Length = 158 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+V+R L +A +++L HNHPSG P AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVVKRALYHNAAAVVLAHNHPSGEVTPGKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSRVFSFAEHGLL 158 >gi|110643998|ref|YP_671728.1| putative radC-like protein [Escherichia coli 536] gi|170682543|ref|YP_001744295.1| RadC family DNA repair protein [Escherichia coli SMS-3-5] gi|256019130|ref|ZP_05432995.1| putative radC-like protein [Shigella sp. D9] gi|306816730|ref|ZP_07450859.1| putative radC-like protein [Escherichia coli NC101] gi|309797259|ref|ZP_07691654.1| putative DNA repair protein RadC [Escherichia coli MS 145-7] gi|24528057|emb|CAD33787.1| Z1217 protein [Escherichia coli] gi|110345590|gb|ABG71827.1| putative radC-like protein [Escherichia coli 536] gi|170520261|gb|ACB18439.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5] gi|305849947|gb|EFM50407.1| putative radC-like protein [Escherichia coli NC101] gi|307555022|gb|ADN47797.1| DNA repair protein [Escherichia coli ABU 83972] gi|308119134|gb|EFO56396.1| putative DNA repair protein RadC [Escherichia coli MS 145-7] Length = 158 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|195183362|dbj|BAG66899.1| predicted protein [Escherichia coli O111:H-] Length = 163 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYYNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163 >gi|110833075|ref|YP_691934.1| DNA repair protein RadC-like protein [Alcanivorax borkumensis SK2] gi|123050781|sp|Q0VT58|Y214_ALCBS RecName: Full=UPF0758 protein ABO_0214 gi|110646186|emb|CAL15662.1| DNA repair protein RadC homolog [Alcanivorax borkumensis SK2] Length = 224 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 40/95 (42%), Positives = 58/95 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E +GTID VY RE+V+R +E +A ++IL HNHPSG PS +D Sbjct: 128 LFLDNKHRLIAFEKLFQGTIDAAAVYPREVVRRAMEHNAAAVILAHNHPSGVAEPSQSDH 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ ++ L + + V DH++IG +VS Sbjct: 188 AITRRLVEALGLVEVRVLDHLVIGDGGWVSLASRG 222 >gi|18265919|gb|AAL67392.1|AF447814_60 putative intergenic-region protein [Escherichia coli] Length = 260 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 164 LYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 223 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 224 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 260 >gi|16128232|ref|NP_414781.1| CP4-6 prophage; predicted DNA repair protein [Escherichia coli str. K-12 substr. MG1655] gi|89107120|ref|AP_000900.1| predicted DNA repair protein [Escherichia coli str. K-12 substr. W3110] gi|170079872|ref|YP_001729192.1| CP4-6 prophage; DNA repair protein [Escherichia coli str. K-12 substr. DH10B] gi|238899635|ref|YP_002925431.1| CP4-6 prophage; putative DNA repair protein [Escherichia coli BW2952] gi|3025218|sp|Q47685|YKFG_ECOLI RecName: Full=UPF0758 protein ykfG gi|1552815|gb|AAB08667.1| similar to E. coli ORF_o160, also similar to radC [Escherichia coli] gi|2367100|gb|AAC73350.1| CP4-6 prophage; predicted DNA repair protein [Escherichia coli str. K-12 substr. MG1655] gi|4902982|dbj|BAA77916.1| predicted DNA repair protein [Escherichia coli str. K12 substr. W3110] gi|169887707|gb|ACB01414.1| CP4-6 prophage; predicted DNA repair protein [Escherichia coli str. K-12 substr. DH10B] gi|238860643|gb|ACR62641.1| CP4-6 prophage; predicted DNA repair protein [Escherichia coli BW2952] gi|260450557|gb|ACX40979.1| DNA repair protein RadC [Escherichia coli DH1] gi|315134932|dbj|BAJ42091.1| CP4-6 prophage; putative DNA repair protein [Escherichia coli DH1] Length = 158 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LIA E GTI+ V+ RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L ++I V DH+I+G SF ++ Sbjct: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 >gi|254361402|ref|ZP_04977543.1| DNA repair protein RadC [Mannheimia haemolytica PHL213] gi|153092908|gb|EDN73939.1| DNA repair protein RadC [Mannheimia haemolytica PHL213] Length = 241 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 62/96 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LI E GTI+ V+ REI++R L+ +A +II+ HNHPSG+ PS++D Sbjct: 132 LFLDNQNRLIYKEKMFFGTINQTAVHPREIIKRALKYNAAAIIVAHNHPSGSCLPSESDR 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ I ++I DHII+GK+ + SF+ ++ Sbjct: 192 SLTKKIEMACELVDIRFVDHIIVGKEKYFSFEEEKL 227 >gi|331647648|ref|ZP_08348740.1| putative DNA repair protein [Escherichia coli M605] gi|331043372|gb|EGI15510.1| putative DNA repair protein [Escherichia coli M605] Length = 163 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQAFSFAEHGLL 163 >gi|331679016|ref|ZP_08379688.1| putative DNA repair protein [Escherichia coli H591] gi|331073081|gb|EGI44404.1| putative DNA repair protein [Escherichia coli H591] Length = 158 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|53729025|ref|ZP_00134298.2| COG2003: DNA repair proteins [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209424|ref|YP_001054649.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae L20] gi|165977413|ref|YP_001653006.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190151327|ref|YP_001969852.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250352|ref|ZP_07336551.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251745|ref|ZP_07337916.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246909|ref|ZP_07528974.1| hypothetical protein appser1_20990 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249045|ref|ZP_07531053.1| hypothetical protein appser2_20080 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251244|ref|ZP_07533165.1| hypothetical protein appser4_20050 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253661|ref|ZP_07535528.1| hypothetical protein appser6_21530 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307255891|ref|ZP_07537692.1| hypothetical protein appser9_21120 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260344|ref|ZP_07542051.1| hypothetical protein appser11_21250 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262474|ref|ZP_07544119.1| hypothetical protein appser12_20140 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264682|ref|ZP_07546262.1| hypothetical protein appser13_20670 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|166218771|sp|A3N3Q8|Y1970_ACTP2 RecName: Full=UPF0758 protein APL_1970 gi|238687531|sp|B0BTZ5|Y2017_ACTPJ RecName: Full=UPF0758 protein APJL_2017 gi|238692412|sp|B3H340|Y2058_ACTP7 RecName: Full=UPF0758 protein APP7_2058 gi|126098216|gb|ABN75044.1| DNA repair protein RadC-like protein [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165877514|gb|ABY70562.1| DNA repair protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189916458|gb|ACE62710.1| DNA repair protein RadC-like protein [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649175|gb|EFL79360.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650822|gb|EFL80979.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852194|gb|EFM84434.1| hypothetical protein appser1_20990 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854503|gb|EFM86698.1| hypothetical protein appser2_20080 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856760|gb|EFM88895.1| hypothetical protein appser4_20050 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858897|gb|EFM90943.1| hypothetical protein appser6_21530 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306861159|gb|EFM93152.1| hypothetical protein appser9_21120 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865595|gb|EFM97476.1| hypothetical protein appser11_21250 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306867851|gb|EFM99682.1| hypothetical protein appser12_20140 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869994|gb|EFN01758.1| hypothetical protein appser13_20670 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 220 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 38/94 (40%), Positives = 57/94 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N LI E GTI+ VY REI++ L+ +A +II+ HNHPSGN PS++D Sbjct: 124 MFLDNQNRLIKKEKMFYGTINQATVYPREIIKEALKCNAAAIIVAHNHPSGNCTPSESDR 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ + + + I DHI++GK + SF+ Sbjct: 184 ALTKKLEMACDLVGIRFVDHIVVGKGDYFSFEEE 217 >gi|15800738|ref|NP_286752.1| RadC family DNA repair protein [Escherichia coli O157:H7 EDL933] gi|15830657|ref|NP_309430.1| DNA repair protein [Escherichia coli O157:H7 str. Sakai] gi|168747209|ref|ZP_02772231.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4113] gi|168754500|ref|ZP_02779507.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4401] gi|168760639|ref|ZP_02785646.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4501] gi|168767678|ref|ZP_02792685.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4486] gi|168773864|ref|ZP_02798871.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4196] gi|168781194|ref|ZP_02806201.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4076] gi|168789211|ref|ZP_02814218.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC869] gi|168789954|ref|ZP_02814961.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC869] gi|168799298|ref|ZP_02824305.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC508] gi|195935412|ref|ZP_03080794.1| putative DNA repair protein [Escherichia coli O157:H7 str. EC4024] gi|208806612|ref|ZP_03248949.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4206] gi|208815111|ref|ZP_03256290.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4045] gi|208822765|ref|ZP_03263084.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4042] gi|209398241|ref|YP_002269871.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4115] gi|215486235|ref|YP_002328666.1| hypothetical protein E2348C_1116 [Escherichia coli O127:H6 str. E2348/69] gi|217328314|ref|ZP_03444396.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. TW14588] gi|254792408|ref|YP_003077245.1| putative DNA repair protein, RADC family [Escherichia coli O157:H7 str. TW14359] gi|260854510|ref|YP_003228401.1| hypothetical protein ECO26_1359 [Escherichia coli O26:H11 str. 11368] gi|260867389|ref|YP_003233791.1| hypothetical protein ECO111_1303 [Escherichia coli O111:H- str. 11128] gi|12514034|gb|AAG55362.1|AE005277_3 putative DNA repair protein, RADC family [Escherichia coli O157:H7 str. EDL933] gi|13360863|dbj|BAB34826.1| putative DNA repair protein [Escherichia coli O157:H7 str. Sakai] gi|187770349|gb|EDU34193.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4196] gi|188018129|gb|EDU56251.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4113] gi|189001340|gb|EDU70326.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4076] gi|189358273|gb|EDU76692.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4401] gi|189363292|gb|EDU81711.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4486] gi|189368665|gb|EDU87081.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4501] gi|189370470|gb|EDU88886.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC869] gi|189371180|gb|EDU89596.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC869] gi|189378248|gb|EDU96664.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC508] gi|208726413|gb|EDZ76014.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4206] gi|208731759|gb|EDZ80447.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4045] gi|208738250|gb|EDZ85933.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4042] gi|209159641|gb|ACI37074.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. EC4115] gi|215264307|emb|CAS08664.1| predicted protein [Escherichia coli O127:H6 str. E2348/69] gi|217318741|gb|EEC27167.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. TW14588] gi|254591808|gb|ACT71169.1| putative DNA repair protein, RADC family [Escherichia coli O157:H7 str. TW14359] gi|257753159|dbj|BAI24661.1| hypothetical protein ECO26_1359 [Escherichia coli O26:H11 str. 11368] gi|257763745|dbj|BAI35240.1| hypothetical protein ECO111_1303 [Escherichia coli O111:H- str. 11128] gi|320189702|gb|EFW64358.1| Putative radC-like protein yeeS [Escherichia coli O157:H7 str. EC1212] gi|323156828|gb|EFZ42962.1| DNA repair RadC family protein [Escherichia coli EPECa14] gi|326339244|gb|EGD63058.1| Putative radC-like protein yeeS [Escherichia coli O157:H7 str. 1125] gi|326344796|gb|EGD68544.1| Putative radC-like protein yeeS [Escherichia coli O157:H7 str. 1044] Length = 158 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|320184366|gb|EFW59178.1| putative DNA repair protein [Shigella flexneri CDC 796-83] Length = 158 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|261248877|emb|CBG26731.1| putative DNA repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] Length = 221 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT++HV V+ REIV+ ++L+A+++IL HNHPSG PS AD Sbjct: 125 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I ++I V DH+IIG+ +VSF I Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >gi|204928480|ref|ZP_03219679.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321913|gb|EDZ07111.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 221 Score = 135 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT++HV V+ REIV+ ++L+A+++IL HNHPSG PS AD Sbjct: 125 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I ++I V DH+IIG+ +VSF I Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >gi|307133081|ref|YP_003885097.1| protein associated with replication fork, putative DNA repair protein [Dickeya dadantii 3937] gi|306530610|gb|ADN00541.1| protein associated with replication fork, possible DNA repair protein [Dickeya dadantii 3937] Length = 232 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I + GTI V V+ REIV+ L+ +A ++IL HNHPSG PS AD Sbjct: 136 MFLDNQHRVIRHQEMFAGTISSVEVHPREIVREALKANAAALILAHNHPSGRAEPSQADR 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I L+I V DH++IG+ +VSF I Sbjct: 196 SITGKIAQACQLLDIRVLDHLVIGRGEYVSFAERGWI 232 >gi|57434486|emb|CAI43901.1| YeeS protein [Escherichia coli] Length = 163 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 163 >gi|300816625|ref|ZP_07096846.1| putative DNA repair protein RadC [Escherichia coli MS 107-1] gi|300530855|gb|EFK51917.1| putative DNA repair protein RadC [Escherichia coli MS 107-1] Length = 158 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|194432463|ref|ZP_03064750.1| DNA repair protein, RadC family [Shigella dysenteriae 1012] gi|194419350|gb|EDX35432.1| DNA repair protein, RadC family [Shigella dysenteriae 1012] Length = 158 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|149181794|ref|ZP_01860285.1| DNA repair protein RadC [Bacillus sp. SG-1] gi|148850535|gb|EDL64694.1| DNA repair protein RadC [Bacillus sp. SG-1] Length = 229 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ + G+++ V+ RE+ + SA SII +HNHPSG+P PS DI Sbjct: 133 LYLNTKNQVLHKQTIFIGSLNASIVHPREVFKEAFRRSAASIICIHNHPSGDPTPSREDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DH+IIG+ +VS K + Sbjct: 193 EVTKRLVECGKIIGIEVLDHLIIGEKKYVSLKEKGYL 229 >gi|260845668|ref|YP_003223446.1| putative radC-like protein YeeS [Escherichia coli O103:H2 str. 12009] gi|257760815|dbj|BAI32312.1| putative radC-like protein YeeS [Escherichia coli O103:H2 str. 12009] Length = 158 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGRQVFSFAEHGLL 158 >gi|110643167|ref|YP_670897.1| putative radC-like protein YeeS [Escherichia coli 536] gi|191171912|ref|ZP_03033458.1| DNA repair protein, RadC family [Escherichia coli F11] gi|194436803|ref|ZP_03068903.1| DNA repair protein, RadC family [Escherichia coli 101-1] gi|260855983|ref|YP_003229874.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368] gi|110344759|gb|ABG70996.1| putative radC-like protein YeeS [Escherichia coli 536] gi|190907947|gb|EDV67540.1| DNA repair protein, RadC family [Escherichia coli F11] gi|194424285|gb|EDX40272.1| DNA repair protein, RadC family [Escherichia coli 101-1] gi|257754632|dbj|BAI26134.1| predicted DNA repair protein [Escherichia coli O26:H11 str. 11368] Length = 158 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|260846935|ref|YP_003224713.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009] gi|257762082|dbj|BAI33579.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009] Length = 158 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGRQVFSFAEHGLL 158 >gi|170765890|ref|ZP_02900701.1| DNA repair protein, RadC family [Escherichia albertii TW07627] gi|260858467|ref|YP_003232358.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368] gi|331668235|ref|ZP_08369085.1| putative DNA repair protein [Escherichia coli TA271] gi|170125036|gb|EDS93967.1| DNA repair protein, RadC family [Escherichia albertii TW07627] gi|257757116|dbj|BAI28618.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368] gi|309702306|emb|CBJ01626.1| putative RadC-like DNA repair protein [Escherichia coli ETEC H10407] gi|323172584|gb|EFZ58218.1| DNA repair protein RadC family protein [Escherichia coli LT-68] gi|331064536|gb|EGI36445.1| putative DNA repair protein [Escherichia coli TA271] Length = 158 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|293393619|ref|ZP_06637929.1| DNA repair protein RadC [Serratia odorifera DSM 4582] gi|291423954|gb|EFE97173.1| DNA repair protein RadC [Serratia odorifera DSM 4582] Length = 228 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I + GTI V V+ REIV+ L+ +A +IIL HNHPSG PS AD Sbjct: 132 LFLDNQHRVIRHQEMFTGTISSVVVHPREIVREALKANAAAIILAHNHPSGKAEPSHADR 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I V DH++IG+ VSF + Sbjct: 192 LITEQVANACQLLEIRVLDHLVIGRGECVSFAERGWL 228 >gi|170680679|ref|YP_001746718.1| RadC family DNA repair protein [Escherichia coli SMS-3-5] gi|170518397|gb|ACB16575.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5] Length = 158 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|20095187|gb|AAM08053.1| hypothetical protein [Providencia rettgeri] Length = 165 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E +GT+D VY RE+ +R LEL+A ++ILVHNHPSG+P PS+AD Sbjct: 69 LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNAAAVILVHNHPSGDPEPSEADK 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L+ ++I DH+++ + VS + Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVAYEGCVSLAERGYL 165 >gi|323971984|gb|EGB67205.1| DNA repair protein RadC [Escherichia coli TA007] Length = 158 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+V+R L +A +++L HNHPSG P AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVVKRALYHNAAAVVLAHNHPSGEVTPGKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+IIG SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIIGGSRVFSFAEHGLL 158 >gi|153822298|ref|ZP_01974965.1| DNA repair protein [Vibrio cholerae B33] gi|229509083|ref|ZP_04398570.1| DNA repair protein RadC [Vibrio cholerae B33] gi|229608755|ref|YP_002879403.1| DNA repair protein RadC [Vibrio cholerae MJ-1236] gi|255743769|ref|ZP_05417727.1| DNA repair protein RadC [Vibrio cholera CIRS 101] gi|126520194|gb|EAZ77417.1| DNA repair protein [Vibrio cholerae B33] gi|229353840|gb|EEO18775.1| DNA repair protein RadC [Vibrio cholerae B33] gi|229371410|gb|ACQ61833.1| DNA repair protein RadC [Vibrio cholerae MJ-1236] gi|255738630|gb|EET94017.1| DNA repair protein RadC [Vibrio cholera CIRS 101] gi|259156144|gb|ACV96092.1| DNA repair protein RadC [Providencia alcalifaciens Ban1] gi|259156276|gb|ACV96223.1| DNA repair protein RadC [Vibrio cholerae Ban5] gi|259156401|gb|ACV96346.1| DNA repair protein RadC [Vibrio cholerae Ind5] Length = 165 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E +GT+D VY RE+ +R LEL+A ++ILVHNHPSG+P PS+AD Sbjct: 69 LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNAAAVILVHNHPSGDPEPSEADK 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L+ ++I DH+++ + VS + Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSLAERGYL 165 >gi|296533048|ref|ZP_06895694.1| DNA repair protein RadC [Roseomonas cervicalis ATCC 49957] gi|296266634|gb|EFH12613.1| DNA repair protein RadC [Roseomonas cervicalis ATCC 49957] Length = 252 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 70/97 (72%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIADE Q+RGT++H PVY RE+V+RCLEL AT++ILVHNHPSG+P PS ADI Sbjct: 156 LFLDSRNRLIADEAQARGTVNHTPVYPREVVKRCLELQATALILVHNHPSGDPTPSAADI 215 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I L I +HDH+I+G +SF+ ++ Sbjct: 216 EMTAEIRAAAATLGIALHDHLIVGNGRHLSFRATGLL 252 >gi|218692535|ref|YP_002400747.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli ED1a] gi|283788471|ref|YP_003368336.1| putative DNA repair protein [Citrobacter rodentium ICC168] gi|218430099|emb|CAR11092.2| putative DNA repair protein; CP4-44 prophage [Escherichia coli ED1a] gi|282951925|emb|CBG91646.1| putative DNA repair protein [Citrobacter rodentium ICC168] Length = 163 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163 >gi|254038104|ref|ZP_04872162.1| YeeS protein [Escherichia sp. 1_1_43] gi|226839728|gb|EEH71749.1| YeeS protein [Escherichia sp. 1_1_43] Length = 163 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD+ Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADL 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163 >gi|307258076|ref|ZP_07539828.1| hypothetical protein appser10_20560 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863439|gb|EFM95370.1| hypothetical protein appser10_20560 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 223 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 38/94 (40%), Positives = 57/94 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N LI E GTI+ VY REI++ L+ +A +II+ HNHPSGN PS++D Sbjct: 124 MFLDNQNRLIKKEKMFYGTINQATVYPREIIKEALKCNAAAIIVAHNHPSGNCTPSESDR 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ + + + I DHI++GK + SF+ Sbjct: 184 ALTKKLEMACDLVGIRFVDHIVVGKGDYFSFEEE 217 >gi|295095223|emb|CBK84313.1| DNA replication and repair protein RadC [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 221 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N ++ GT+ HV V+ REIV+ ++++A +IL HNHPSG PS AD Sbjct: 125 IFLDNKNRVLKHTRLFSGTLSHVEVHPREIVREAIKVNAAGVILAHNHPSGCAEPSRADK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II ++I V DH+IIG+ ++SF I Sbjct: 185 AITERIIKCCQFMDIRVLDHLIIGRGEYISFAERGWI 221 >gi|227115112|ref|ZP_03828768.1| DNA repair protein RadC [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 221 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I + GTI+ V V+ REIV+ L+ +A ++IL HNHPSG PS AD Sbjct: 125 LFLDNQHHVIRHQEMFVGTINSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ + I V DH++IG +VSF I Sbjct: 185 AITEQIVKACLLMEIRVLDHLVIGHGEYVSFAERGWI 221 >gi|194426516|ref|ZP_03059070.1| DNA repair protein, RadC family [Escherichia coli B171] gi|194415255|gb|EDX31523.1| DNA repair protein, RadC family [Escherichia coli B171] gi|323158205|gb|EFZ44297.1| DNA repair protein RadC family protein [Escherichia coli E128010] Length = 158 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYYNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|37680435|ref|NP_935044.1| DNA repair protein [Vibrio vulnificus YJ016] gi|37199183|dbj|BAC95015.1| DNA repair protein [Vibrio vulnificus YJ016] Length = 184 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI + RGT+D VY RE+V+ L ++A ++I HNHPSG+P PS AD Sbjct: 89 LLLDNQHRLIEFKELFRGTVDAANVYPREVVKEALHVNAAAVIFAHNHPSGDPEPSQADK 148 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+ ++I V DH+++G ++ VSF I Sbjct: 149 RITERLKDALSLVDIRVLDHVVVG-ESCVSFAERGWI 184 >gi|315614820|gb|EFU95458.1| DNA repair RadC family protein [Escherichia coli 3431] Length = 158 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|194469241|ref|ZP_03075225.1| DNA repair protein, RadC family [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205358755|ref|ZP_02658774.2| DNA repair protein, RadC family [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194455605|gb|EDX44444.1| DNA repair protein, RadC family [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332230|gb|EDZ18994.1| DNA repair protein, RadC family [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 160 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ N LIA E G+I V+ RE+V+R L +A ++IL HNHPSG+ +PS AD Sbjct: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTSPSQADK 123 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L ++I V DH+I+G +SF ++ Sbjct: 124 TITQRLVQALQLVDIRVPDHLIVGGTQILSFAEHGLL 160 >gi|218515385|ref|ZP_03512225.1| DNA repair protein RadC [Rhizobium etli 8C-3] Length = 274 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 69/97 (71%), Positives = 80/97 (82%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ II L+I VHDHIIIGKD VS KGL++I Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274 >gi|26250960|ref|NP_757000.1| putative radC-like protein yeeS [Escherichia coli CFT073] gi|117625240|ref|YP_854323.1| putative radC-like protein YeeS [Escherichia coli APEC O1] gi|26111392|gb|AAN83574.1|AE016771_85 Putative radC-like protein yeeS [Escherichia coli CFT073] gi|70608386|gb|AAZ04458.1| putative RadC-like protein [Escherichia coli] gi|115514364|gb|ABJ02439.1| putative radC-like protein YeeS [Escherichia coli APEC O1] gi|323957540|gb|EGB53256.1| DNA repair protein RadC [Escherichia coli H263] Length = 158 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|16762580|ref|NP_458197.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16767014|ref|NP_462629.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29144069|ref|NP_807411.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62182222|ref|YP_218639.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167549023|ref|ZP_02342782.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168235334|ref|ZP_02660392.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168241908|ref|ZP_02666840.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168260517|ref|ZP_02682490.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464963|ref|ZP_02698855.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168818441|ref|ZP_02830441.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194447446|ref|YP_002047761.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471766|ref|ZP_03077750.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194738096|ref|YP_002116664.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251672|ref|YP_002148661.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264351|ref|ZP_03164425.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198244011|ref|YP_002217690.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388196|ref|ZP_03214808.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205354669|ref|YP_002228470.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858966|ref|YP_002245617.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213161281|ref|ZP_03346991.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213582558|ref|ZP_03364384.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213615654|ref|ZP_03371480.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213647926|ref|ZP_03377979.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855129|ref|ZP_03383369.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224585529|ref|YP_002639328.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910236|ref|ZP_04654073.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289809998|ref|ZP_06540627.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289824121|ref|ZP_06543718.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|54039003|sp|P65961|YICR_SALTI RecName: Full=UPF0758 protein yicR gi|54041784|sp|P65960|YICR_SALTY RecName: Full=UPF0758 protein yicR gi|73913738|sp|Q57IA4|YICR_SALCH RecName: Full=UPF0758 protein yicR gi|238689782|sp|B4TZY0|YICR_SALSV RecName: Full=UPF0758 protein yicR gi|238689997|sp|B5EXE3|YICR_SALA4 RecName: Full=UPF0758 protein yicR gi|238690228|sp|B4T9C3|YICR_SALHS RecName: Full=UPF0758 protein yicR gi|238690333|sp|B5FM62|YICR_SALDC RecName: Full=UPF0758 protein yicR gi|238690466|sp|B5R5G2|YICR_SALEP RecName: Full=UPF0758 protein yicR gi|238690538|sp|B5RGE9|YICR_SALG2 RecName: Full=UPF0758 protein yicR gi|254789657|sp|C0Q1X1|YICR_SALPC RecName: Full=UPF0758 protein yicR gi|25322100|pir||AD0971 probable DNA repair protein radC [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16422297|gb|AAL22588.1| putative DNA repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504885|emb|CAD03264.1| putative DNA repair protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139706|gb|AAO71271.1| putative DNA repair protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62129855|gb|AAX67558.1| putative DNA repair protein, associated with replication forks [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194405750|gb|ACF65969.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194458130|gb|EDX46969.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713598|gb|ACF92819.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632438|gb|EDX50922.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197215375|gb|ACH52772.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242606|gb|EDY25226.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197291464|gb|EDY30816.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938527|gb|ACH75860.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605294|gb|EDZ03839.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205274450|emb|CAR39482.1| putative DNA repair protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205325640|gb|EDZ13479.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205338909|gb|EDZ25673.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205344387|gb|EDZ31151.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350173|gb|EDZ36804.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710769|emb|CAR35130.1| putative DNA repair protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224470057|gb|ACN47887.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|301160266|emb|CBW19789.1| putative DNA repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914755|dbj|BAJ38729.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320088149|emb|CBY97911.1| DNA repair protein radC homolog [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226782|gb|EFX51832.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322612895|gb|EFY09847.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618960|gb|EFY15847.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625263|gb|EFY22090.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630070|gb|EFY26843.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634261|gb|EFY30996.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635838|gb|EFY32547.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643024|gb|EFY39601.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645048|gb|EFY41579.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649852|gb|EFY46275.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653059|gb|EFY49394.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661122|gb|EFY57350.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662389|gb|EFY58602.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667267|gb|EFY63433.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674356|gb|EFY70449.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678436|gb|EFY74497.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680942|gb|EFY76976.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687122|gb|EFY83095.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716710|gb|EFZ08281.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323132089|gb|ADX19519.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195846|gb|EFZ81018.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198237|gb|EFZ83343.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323200855|gb|EFZ85925.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206609|gb|EFZ91567.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210478|gb|EFZ95364.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216234|gb|EGA00962.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220457|gb|EGA04911.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225320|gb|EGA09554.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323228434|gb|EGA12565.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234255|gb|EGA18343.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237240|gb|EGA21307.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244759|gb|EGA28763.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323245866|gb|EGA29856.1| hypothetical protein SEEM9199_16688 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250951|gb|EGA34827.1| hypothetical protein SEEM8282_21207 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257301|gb|EGA41000.1| hypothetical protein SEEM8283_22649 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262225|gb|EGA45786.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264564|gb|EGA48068.1| hypothetical protein SEEM8285_13785 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268854|gb|EGA52312.1| hypothetical protein SEEM8287_17174 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326629808|gb|EGE36151.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 221 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT++HV V+ REIV+ ++L+A+++IL HNHPSG PS AD Sbjct: 125 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I ++I V DH+IIG+ +VSF I Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >gi|237704007|ref|ZP_04534488.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|226901919|gb|EEH88178.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] Length = 163 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163 >gi|262392610|ref|YP_003284464.1| DNA repair protein RadC [Vibrio sp. Ex25] gi|262336204|gb|ACY49999.1| DNA repair protein RadC [Vibrio sp. Ex25] Length = 158 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + LI+ E GTID +Y RE+++ L +A ++I HNHPSG PS AD Sbjct: 63 MFLDNQHQLISFEELFFGTIDAASIYPREVLKTALNHNAAAVIFAHNHPSGIAEPSQADK 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ +I L ++I V DHI++G + VSF +I Sbjct: 123 RITQRLIDALKLVDIRVLDHIVVG-EGCVSFAEKGLI 158 >gi|326625474|gb|EGE31819.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 221 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT++HV V+ REIV+ ++L+A+++IL HNHPSG PS AD Sbjct: 125 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I ++I V DH+IIG+ +VSF I Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >gi|281181419|dbj|BAI57749.1| conserved hypothetical protein [Escherichia coli SE15] Length = 158 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|220927247|ref|YP_002502549.1| DNA repair protein RadC [Methylobacterium nodulans ORS 2060] gi|219951854|gb|ACL62246.1| DNA repair protein RadC [Methylobacterium nodulans ORS 2060] Length = 242 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 64/97 (65%), Positives = 80/97 (82%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI Sbjct: 146 LFLDKRNRLIADEVQGRGTVDHTPVYPREVVRRALELSATALILVHNHPSGDPTPSQADI 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT++I+ PL I+VHDHI++G++ SFKGL++I Sbjct: 206 RMTRDIVGAAEPLGIVVHDHIVVGREGHASFKGLKLI 242 >gi|117626422|ref|YP_859745.1| putative radC-like protein YeeS [Escherichia coli APEC O1] gi|115515546|gb|ABJ03621.1| putative radC-like protein YeeS [Escherichia coli APEC O1] gi|323950295|gb|EGB46176.1| DNA repair protein RadC [Escherichia coli H252] gi|323954374|gb|EGB50158.1| DNA repair protein RadC [Escherichia coli H263] Length = 158 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|260866447|ref|YP_003232849.1| putative DNA repair protein [Escherichia coli O111:H- str. 11128] gi|257762803|dbj|BAI34298.1| putative DNA repair protein [Escherichia coli O111:H- str. 11128] Length = 158 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|238760452|ref|ZP_04621590.1| DNA repair protein radC [Yersinia aldovae ATCC 35236] gi|238701347|gb|EEP93926.1| DNA repair protein radC [Yersinia aldovae ATCC 35236] Length = 222 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I E GTI V V+ REIV+ L+++A ++IL HNHPSG PS AD Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT +I + L+I V DH+++G+ VSF + Sbjct: 186 LMTTQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 222 >gi|218699408|ref|YP_002407037.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli IAI39] gi|218369394|emb|CAR17153.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli IAI39] Length = 158 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG P AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPGKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|323951546|gb|EGB47421.1| DNA repair protein RadC [Escherichia coli H252] Length = 158 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|294666100|ref|ZP_06731358.1| DNA repair protein RadC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604114|gb|EFF47507.1| DNA repair protein RadC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 225 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + IA E GTID ++ RE+V+R L +A ++I+ HNHPSGNP PS+AD Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ +L ++I + DH +IG VSF + Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSFAERGWL 224 >gi|284922002|emb|CBG35080.1| putative DNA repair protein [Escherichia coli 042] Length = 163 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+IIG SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIIGGSQVFSFAEHGLL 163 >gi|238755011|ref|ZP_04616359.1| DNA repair protein RadC [Yersinia ruckeri ATCC 29473] gi|238706715|gb|EEP99084.1| DNA repair protein RadC [Yersinia ruckeri ATCC 29473] Length = 159 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E G+I+ V+ REIV+ L +A +++L HNHPSG PS+AD Sbjct: 63 LFLDNQHRLLECETLFSGSINSSEVHPREIVKAALRHNAAAVVLAHNHPSGYAEPSEADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L + + V DH ++G VSF + Sbjct: 123 QVTQRTVNALTLVEVRVLDHFVVGGKEVVSFAERGWL 159 >gi|194445201|ref|YP_002042979.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|238693551|sp|B4SXE0|YICR_SALNS RecName: Full=UPF0758 protein yicR gi|194403864|gb|ACF64086.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 221 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT++HV V+ REIV+ ++L+A+++IL HNHPSG PS AD Sbjct: 125 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I ++I V DH+IIG+ +VSF I Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >gi|84386400|ref|ZP_00989428.1| DNA repair protein RadC-related protein [Vibrio splendidus 12B01] gi|84378824|gb|EAP95679.1| DNA repair protein RadC-related protein [Vibrio splendidus 12B01] Length = 157 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + +GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D+ SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDSCTSFAERGWL 157 >gi|330812589|ref|YP_004357051.1| putative DNA repair protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380697|gb|AEA72047.1| putative DNA repair protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 224 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ + ++ E RG+ID V+ R++V+R L +A ++IL HNHPSGN PS AD Sbjct: 128 LFLNSKHQVLTFEALFRGSIDSASVHPRQVVKRALAHNAAALILCHNHPSGNTEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+G +S + Sbjct: 188 VLTERLQEALELIDVRVLDHFIVGDGEPLSMAERGWM 224 >gi|323160906|gb|EFZ46830.1| DNA repair protein RadC family protein [Escherichia coli E128010] Length = 158 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|16129943|ref|NP_416506.1| CP4-44 prophage; predicted DNA repair protein [Escherichia coli str. K-12 substr. MG1655] gi|89108821|ref|AP_002601.1| predicted DNA repair protein [Escherichia coli str. K-12 substr. W3110] gi|170081631|ref|YP_001730951.1| CP4-44 prophage; DNA repair protein [Escherichia coli str. K-12 substr. DH10B] gi|218558883|ref|YP_002391796.1| DNA repair protein; CP4-44 prophage [Escherichia coli S88] gi|218690065|ref|YP_002398277.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli ED1a] gi|218695627|ref|YP_002403294.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli 55989] gi|238901193|ref|YP_002926989.1| CP4-44 prophage; putative DNA repair protein [Escherichia coli BW2952] gi|3025155|sp|P76362|YEES_ECOLI RecName: Full=UPF0758 protein yeeS gi|1736671|dbj|BAA15826.1| predicted DNA repair protein [Escherichia coli str. K12 substr. W3110] gi|1788312|gb|AAC75063.1| CP4-44 prophage; predicted DNA repair protein [Escherichia coli str. K-12 substr. MG1655] gi|169889466|gb|ACB03173.1| CP4-44 prophage; predicted DNA repair protein [Escherichia coli str. K-12 substr. DH10B] gi|218352359|emb|CAU98132.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli 55989] gi|218365652|emb|CAR03388.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli S88] gi|218427629|emb|CAR08539.2| putative DNA repair protein; CP4-44 prophage [Escherichia coli ED1a] gi|238860616|gb|ACR62614.1| CP4-44 prophage; predicted DNA repair protein [Escherichia coli BW2952] gi|260448897|gb|ACX39319.1| DNA repair protein RadC [Escherichia coli DH1] gi|315136634|dbj|BAJ43793.1| DNA repair protein, RadC family [Escherichia coli DH1] Length = 148 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 >gi|213418639|ref|ZP_03351705.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 167 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT++HV V+ REIV+ ++L+A+++IL HNHPSG PS AD Sbjct: 71 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 130 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I ++I V DH+IIG+ +VSF I Sbjct: 131 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 167 >gi|161525489|ref|YP_001580501.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616] gi|189349783|ref|YP_001945411.1| DNA repair protein [Burkholderia multivorans ATCC 17616] gi|160342918|gb|ABX16004.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616] gi|189333805|dbj|BAG42875.1| DNA repair protein [Burkholderia multivorans ATCC 17616] Length = 169 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI RGTID V+ RE+V+ L L+A ++I+ HNHPSGNP PS AD Sbjct: 73 LFLDTRHRLIDYAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADR 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + L +++ DHII+ SF +I Sbjct: 133 AMTSQLRQALALVDVRTLDHIIVAGGTTTSFAERGLI 169 >gi|26250393|ref|NP_756433.1| putative radC-like protein yeeS [Escherichia coli CFT073] gi|26110823|gb|AAN83007.1|AE016769_122 Putative radC-like protein yeeS [Escherichia coli CFT073] Length = 148 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 148 >gi|73669792|ref|YP_305807.1| DNA repair protein RadC [Methanosarcina barkeri str. Fusaro] gi|121729469|sp|Q46A65|Y2303_METBF RecName: Full=UPF0758 protein Mbar_A2303 gi|72396954|gb|AAZ71227.1| DNA replication and repair protein RadC [Methanosarcina barkeri str. Fusaro] Length = 229 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N ++ +EV S G+++ V+ RE+ + L S+ S+I++HNHPSG+P+PS DI Sbjct: 132 LCLDTKNQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMIHNHPSGDPSPSREDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I V DHIIIG+ +VS K + Sbjct: 192 MVTEKMVEGGKLLGIDVLDHIIIGEGRYVSLKDEGFV 228 >gi|114762078|ref|ZP_01441546.1| DNA repair protein RadC [Pelagibaca bermudensis HTCC2601] gi|114545102|gb|EAU48105.1| DNA repair protein RadC [Roseovarius sp. HTCC2601] Length = 253 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI Sbjct: 157 LFLDRKNVLIADEAQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSGADI 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I L I +HDH++IG+ +SF+ ++ Sbjct: 217 EMTEQIRIAAEALGITLHDHLVIGRSRELSFRAEGLL 253 >gi|218707946|ref|YP_002415465.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli UMN026] gi|331650756|ref|ZP_08351784.1| putative DNA repair protein [Escherichia coli M718] gi|218435043|emb|CAR15996.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli UMN026] gi|323950625|gb|EGB46503.1| DNA repair protein RadC [Escherichia coli H252] gi|331051210|gb|EGI23259.1| putative DNA repair protein [Escherichia coli M718] Length = 163 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEYGLL 163 >gi|218510678|ref|ZP_03508556.1| DNA repair protein RadC [Rhizobium etli Brasil 5] Length = 274 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 69/97 (71%), Positives = 80/97 (82%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ II L+I VHDHIIIGKD VS KGL++I Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274 >gi|170744786|ref|YP_001773441.1| DNA repair protein RadC [Methylobacterium sp. 4-46] gi|168199060|gb|ACA21007.1| DNA repair protein RadC [Methylobacterium sp. 4-46] Length = 247 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 66/97 (68%), Positives = 81/97 (83%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P+PS ADI Sbjct: 151 LFLDKRNRLIADEVQGRGTVDHTPVYPREVVRRALELSATALILVHNHPSGDPSPSQADI 210 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT++I+ PL I+VHDHII+G+D SFKGL++I Sbjct: 211 RMTRDIVGAAEPLGIVVHDHIIVGRDGHASFKGLKLI 247 >gi|308188656|ref|YP_003932787.1| DNA repair protein radC [Pantoea vagans C9-1] gi|308059166|gb|ADO11338.1| DNA repair protein radC [Pantoea vagans C9-1] Length = 218 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ + G+I+ V V+ REIV+ L+L+A ++IL HNHPSG PS AD Sbjct: 122 LFLDNQHRVLRAQNMFSGSINSVEVHPREIVREALKLNAAALILAHNHPSGMAEPSRADR 181 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + +I + DH++IG +VSF + Sbjct: 182 EVTHKVSEACQLFDIRLLDHLVIGHGEYVSFAERGWL 218 >gi|191167170|ref|ZP_03028990.1| DNA repair protein, RadC family [Escherichia coli B7A] gi|190902827|gb|EDV62556.1| DNA repair protein, RadC family [Escherichia coli B7A] Length = 158 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLTHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|226942456|ref|YP_002797529.1| DNA repair protein RadC [Azotobacter vinelandii DJ] gi|259551855|sp|C1DI57|Y294_AZOVD RecName: Full=UPF0758 protein Avin_02940 gi|226717383|gb|ACO76554.1| P-pantothenate cysteine ligase / P-pantothenoylcysteine decarboxylase [Azotobacter vinelandii DJ] Length = 224 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A EV +GT+D VY R++++R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDAKHRVLAFEVLFQGTVDGASVYPRQVLKRALAHNAAALILTHNHPSGIAEPSQADF 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ V DH I+G +S + Sbjct: 188 SLTRRLKEALALVDVRVLDHFIVGDGEPLSMAEQGWL 224 >gi|121594972|ref|YP_986868.1| DNA repair protein RadC [Acidovorax sp. JS42] gi|120607052|gb|ABM42792.1| DNA repair protein RadC [Acidovorax sp. JS42] Length = 168 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI GTID V+ RE+V++ L L+A ++++ HNHPSG+P PS AD Sbjct: 72 LFLDTRHRLIDYVEMFHGTIDSAEVHPREVVKQALRLNAAAVVVSHNHPSGSPEPSAADR 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHII+ +A SF +I Sbjct: 132 ALTQRLREALGLVDVRVLDHIIVAGNATASFAERGLI 168 >gi|193069504|ref|ZP_03050458.1| DNA repair protein, RadC family [Escherichia coli E110019] gi|192957252|gb|EDV87701.1| DNA repair protein, RadC family [Escherichia coli E110019] Length = 158 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A++++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNASAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|91210173|ref|YP_540159.1| putative radC-like protein YeeS [Escherichia coli UTI89] gi|312966012|ref|ZP_07780238.1| DNA repair RadC family protein [Escherichia coli 2362-75] gi|91071747|gb|ABE06628.1| putative radC-like protein YeeS [Escherichia coli UTI89] gi|294490760|gb|ADE89516.1| DNA repair protein, RadC family [Escherichia coli IHE3034] gi|307627505|gb|ADN71809.1| putative DNA repair protein [Escherichia coli UM146] gi|312289255|gb|EFR17149.1| DNA repair RadC family protein [Escherichia coli 2362-75] Length = 158 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|78049584|ref|YP_365759.1| DNA repair protein RadC [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123583963|sp|Q3BNA4|Y4028_XANC5 RecName: Full=UPF0758 protein XCV4028 gi|78038014|emb|CAJ25759.1| DNA repair protein RadC [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 225 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + IA E GTID ++ RE+V+R L +A ++I+ HNHPSGNP PS+AD Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ +L ++I + DH +IG VSF + Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSFAERGWL 224 >gi|238798812|ref|ZP_04642281.1| DNA repair protein radC [Yersinia mollaretii ATCC 43969] gi|238717320|gb|EEQ09167.1| DNA repair protein radC [Yersinia mollaretii ATCC 43969] Length = 222 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I E GTI V V+ REIV+ L+ +A ++IL HNHPSG PS AD Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT +I + L+I V DH+++G+ VSF + Sbjct: 186 LMTTQVIKACSILDIRVLDHLVVGRGECVSFAERGWL 222 >gi|51891509|ref|YP_074200.1| DNA repair protein [Symbiobacterium thermophilum IAM 14863] gi|81692227|sp|Q67SI7|Y371_SYMTH RecName: Full=UPF0758 protein STH371 gi|51855198|dbj|BAD39356.1| DNA repair protein [Symbiobacterium thermophilum IAM 14863] Length = 234 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I E S GT+ V+ RE+ + + SA ++IL HNHPSG+P PS D Sbjct: 136 ILLNAKNQVIDVECVSEGTLTASLVHPREVFKTAIRRSAHAVILAHNHPSGDPTPSREDR 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DH+++G+ + SF+ ++ Sbjct: 196 EITRRLVQAGRVIGIEVLDHLVVGQGGYTSFRERGLL 232 >gi|190891537|ref|YP_001978079.1| DNA repair protein [Rhizobium etli CIAT 652] gi|226736627|sp|B3PXW5|Y1935_RHIE6 RecName: Full=UPF0758 protein RHECIAT_CH0001935 gi|190696816|gb|ACE90901.1| DNA repair protein [Rhizobium etli CIAT 652] Length = 274 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 69/97 (71%), Positives = 80/97 (82%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ II L+I VHDHIIIGKD VS KGL++I Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274 >gi|170680081|ref|YP_001743141.1| RadC family DNA repair protein [Escherichia coli SMS-3-5] gi|170517799|gb|ACB15977.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5] Length = 158 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADC 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|323945928|gb|EGB41970.1| DNA repair protein RadC [Escherichia coli H120] Length = 163 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEYGLL 163 >gi|331685379|ref|ZP_08385965.1| putative DNA repair protein [Escherichia coli H299] gi|323939165|gb|EGB35379.1| DNA repair protein RadC [Escherichia coli E482] gi|331077750|gb|EGI48962.1| putative DNA repair protein [Escherichia coli H299] Length = 158 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+IIG SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 158 >gi|288933007|ref|YP_003437066.1| DNA repair protein RadC [Klebsiella variicola At-22] gi|290511800|ref|ZP_06551168.1| DNA repair protein RadC [Klebsiella sp. 1_1_55] gi|288887736|gb|ADC56054.1| DNA repair protein RadC [Klebsiella variicola At-22] gi|289775590|gb|EFD83590.1| DNA repair protein RadC [Klebsiella sp. 1_1_55] Length = 221 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N ++ GT+ HV V+ REIV+ ++++A ++IL HNHPSG+P PS AD Sbjct: 125 IFLDNQNRVLKHSRLFSGTLSHVEVHPREIVREAIKVNAAAVILAHNHPSGSPEPSQADR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DH++IG+ A+VSF I Sbjct: 185 LITERVVKCCRFMEIRVLDHLVIGRGAYVSFAERGWI 221 >gi|26246178|ref|NP_752217.1| putative radC-like protein yeeS [Escherichia coli CFT073] gi|18265872|gb|AAL67345.1|AF447814_13 intergenic-region protein [Escherichia coli] gi|26106575|gb|AAN78761.1|AE016755_261 Putative radC-like protein yeeS [Escherichia coli CFT073] Length = 163 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163 >gi|298382287|ref|ZP_06991884.1| radC-like protein yeeS [Escherichia coli FVEC1302] gi|298277427|gb|EFI18943.1| radC-like protein yeeS [Escherichia coli FVEC1302] Length = 158 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|261250535|ref|ZP_05943110.1| DNA repair protein RadC [Vibrio orientalis CIP 102891] gi|260939104|gb|EEX95091.1| DNA repair protein RadC [Vibrio orientalis CIP 102891] Length = 222 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E +GTID VY RE+V+R LE +A ++IL HNHPSG PS +D Sbjct: 126 LFLDNQHRVICGEPLFQGTIDAASVYPREVVKRSLEHNAAALILAHNHPSGVAEPSQSDR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L ++I V DH ++G VSF I Sbjct: 186 RITRRITDALALVDIRVLDHFVVGDGEIVSFAERGWI 222 >gi|260845828|ref|YP_003223606.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009] gi|257760975|dbj|BAI32472.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009] Length = 158 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGRQVFSFAEHGLL 158 >gi|206579335|ref|YP_002236000.1| DNA repair protein RadC [Klebsiella pneumoniae 342] gi|238054489|sp|B5XTG5|Y116_KLEP3 RecName: Full=UPF0758 protein KPK_0116 gi|206568393|gb|ACI10169.1| DNA repair protein RadC [Klebsiella pneumoniae 342] Length = 221 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N ++ GT+ HV V+ REIV+ ++++A ++IL HNHPSG+P PS AD Sbjct: 125 IFLDNQNRVLKHSRLFSGTLSHVEVHPREIVREAIKVNAAAVILAHNHPSGSPEPSQADR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DH++IG+ A+VSF I Sbjct: 185 LITERVVKCCRFMEIRVLDHLVIGRGAYVSFAERGWI 221 >gi|21244634|ref|NP_644216.1| DNA repair protein RadC [Xanthomonas axonopodis pv. citri str. 306] gi|25009022|sp|Q8PFR3|Y3915_XANAC RecName: Full=UPF0758 protein XAC3915 gi|21110318|gb|AAM38752.1| DNA repair protein [Xanthomonas axonopodis pv. citri str. 306] Length = 225 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + IA E GTID ++ RE+V+R L +A ++I+ HNHPSGNP PS+AD Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ +L ++I + DH +IG VSF + Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSFAERGWL 224 >gi|146309390|ref|YP_001189855.1| DNA repair protein RadC [Pseudomonas mendocina ymp] gi|166218789|sp|A4Y0K7|Y4376_PSEMY RecName: Full=UPF0758 protein Pmen_4376 gi|145577591|gb|ABP87123.1| DNA replication and repair protein RadC [Pseudomonas mendocina ymp] Length = 224 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A EV RG+ID VY R++V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDAKHRVLAFEVLFRGSIDSASVYPRQVVKRALANNAAAVILTHNHPSGVCEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L + + V DH I+G +S L + Sbjct: 188 VLTQRLKDALALVEVRVLDHFIVGDGEPLSMAELGWM 224 >gi|330503754|ref|YP_004380623.1| DNA repair protein RadC [Pseudomonas mendocina NK-01] gi|328918040|gb|AEB58871.1| DNA repair protein RadC [Pseudomonas mendocina NK-01] Length = 168 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI RGTID VY RE+V+ L L+A ++ HNHPSGNP PS AD Sbjct: 72 LFLDAKHRLIQYVEMFRGTIDSASVYPREVVKEALRLNAAAVFFAHNHPSGNPEPSQADK 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ DHII+ VSF L ++ Sbjct: 132 VLTQRLKEALALVDVRSLDHIIVAGQRTVSFAELGLL 168 >gi|319654115|ref|ZP_08008205.1| hypothetical protein HMPREF1013_04825 [Bacillus sp. 2_A_57_CT2] gi|317394200|gb|EFV74948.1| hypothetical protein HMPREF1013_04825 [Bacillus sp. 2_A_57_CT2] Length = 232 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N++I + G ++ V+ REI ++ ++ SII+ H+HPSG+P PS DI Sbjct: 136 LFLNSKNVVIGKKTIFVGELNSCNVHPREIFHEAIQRTSASIIVAHSHPSGDPTPSREDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + + I V DH+IIG ++S K + Sbjct: 196 EMTKRLREAGELIGIPVLDHVIIGNGRYISLKEKGYL 232 >gi|74318606|ref|YP_316346.1| DNA repair protein RadC [Thiobacillus denitrificans ATCC 25259] gi|123611212|sp|Q3SFR5|Y2588_THIDA RecName: Full=UPF0758 protein Tbd_2588 gi|74058101|gb|AAZ98541.1| DNA repair protein RadC [Thiobacillus denitrificans ATCC 25259] Length = 224 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N +IA E RGT+ VY REIV+R L +A ++IL HNHPSG PS AD Sbjct: 128 VFLNAQNRVIAVEELFRGTLTQTSVYPREIVKRALAHNAAAMILAHNHPSGVNEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L ++I V DH II + +SF + Sbjct: 188 SLTRRLAEALALVDIRVLDHFIIAGASALSFAEAGHL 224 >gi|15603017|ref|NP_246089.1| DNA repair protein RadC [Pasteurella multocida subsp. multocida str. Pm70] gi|13431801|sp|P57913|Y1152_PASMU RecName: Full=UPF0758 protein PM1152 gi|12721500|gb|AAK03236.1| RadC [Pasteurella multocida subsp. multocida str. Pm70] Length = 224 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ ++ REI++ L +A ++IL HNHPSGNP PS +D Sbjct: 128 LFLDNQHRLIKQEEMFLGTINCTTIHPREIIKSALFCNAAALILAHNHPSGNPEPSASDK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I + I + DH +IGK + SF R++ Sbjct: 188 MVTTKIQAAAELVEIRILDHFVIGKGCYYSFAENRLL 224 >gi|304407507|ref|ZP_07389159.1| DNA repair protein RadC [Paenibacillus curdlanolyticus YK9] gi|304343458|gb|EFM09300.1| DNA repair protein RadC [Paenibacillus curdlanolyticus YK9] Length = 229 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N ++A ++ S GT++ V+ RE+ + ++ S+ SII HNHPSG+P PS DI Sbjct: 133 LFLNTKNQVVAKDMLSVGTLNASLVHPREVFREAIKRSSASIICAHNHPSGDPTPSPEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I V DH+IIG FVS K ++ Sbjct: 193 SLTRRLAEAGELIGIEVLDHLIIGDGKFVSLKEQGLL 229 >gi|302389307|ref|YP_003825128.1| DNA replication and repair protein RadC [Thermosediminibacter oceani DSM 16646] gi|302199935|gb|ADL07505.1| DNA replication and repair protein RadC [Thermosediminibacter oceani DSM 16646] Length = 237 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I+ E S G+++ V+ RE+ + ++ S+ +IILVHNHPSG+P PS DI Sbjct: 141 ILLNVKNRVISVEDISIGSLNSSIVHPREVFKPAIKRSSAAIILVHNHPSGDPTPSREDI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I V DH+IIG ++VSFK ++ Sbjct: 201 EITRRLVEAGRILGIDVLDHVIIGNPSYVSFKEKGLL 237 >gi|209693807|ref|YP_002261735.1| DNA repair protein RadC [Aliivibrio salmonicida LFI1238] gi|238058401|sp|B6EPP3|Y192_ALISL RecName: Full=UPF0758 protein VSAL_I0192 gi|208007758|emb|CAQ77877.1| DNA repair protein RadC [Aliivibrio salmonicida LFI1238] Length = 224 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ EV GTID VY RE+V+R ++ +A +IIL HNHPSG PS AD Sbjct: 128 LFLDNQHRVLKGEVLFEGTIDAAAVYPREVVKRSIDYNAAAIILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + ++I V DH +IG VSF I Sbjct: 188 RITKRISDAVELVDIRVLDHFVIGDGEIVSFAERGWI 224 >gi|92115088|ref|YP_575016.1| DNA repair protein RadC [Chromohalobacter salexigens DSM 3043] gi|122419198|sp|Q1QT91|Y2972_CHRSD RecName: Full=UPF0758 protein Csal_2972 gi|91798178|gb|ABE60317.1| DNA replication and repair protein RadC [Chromohalobacter salexigens DSM 3043] Length = 224 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E S+GT+D VY RE+ +R L L+A ++I HNHPSG PSDAD Sbjct: 128 LFLDTQHRVIRFETLSKGTLDSASVYPREVSRRALALNAGALIFAHNHPSGVAEPSDADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +I V DH ++G VSF + Sbjct: 188 RITQRLSDALGLFDIRVLDHFVVGDGEVVSFAERGWL 224 >gi|311281126|ref|YP_003943357.1| DNA repair protein RadC [Enterobacter cloacae SCF1] gi|308750321|gb|ADO50073.1| DNA repair protein RadC [Enterobacter cloacae SCF1] Length = 160 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ N LIA E G+I V+ RE+V+R L +A ++IL HNHPSG+ +PS AD Sbjct: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALHFNAAAVILAHNHPSGDTSPSQADK 123 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L ++I V DH+I+G +SF ++ Sbjct: 124 TITQRLVQALQLVDIRVPDHLIVGGTQILSFAEHGLL 160 >gi|50119106|ref|YP_048273.1| DNA repair protein RadC [Pectobacterium atrosepticum SCRI1043] gi|73913734|sp|Q6DAV7|Y145_ERWCT RecName: Full=UPF0758 protein ECA0145 gi|49609632|emb|CAG73065.1| DNA repair protein [Pectobacterium atrosepticum SCRI1043] Length = 221 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I + GTI+ V V+ REIV+ L+ +A ++IL HNHPSG PS AD Sbjct: 125 LFLDNQHHVIRHQEMFVGTINSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ L I V DH++IG FVSF I Sbjct: 185 AITEQIVKACLLLEIRVLDHLVIGHGEFVSFAERGWI 221 >gi|330824214|ref|YP_004387517.1| DNA repair protein RadC [Alicycliphilus denitrificans K601] gi|321116516|dbj|BAJ72215.1| DNA repair protein RadC [Acidovorax sp. KKS102] gi|329309586|gb|AEB84001.1| DNA repair protein RadC [Alicycliphilus denitrificans K601] Length = 168 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI RGTID V+ RE+V++ L L+A ++I+ HNHPSGN PS AD Sbjct: 72 LFLDTRHRLIDYVEMFRGTIDAAEVHPREVVKQALRLNAAAVIVSHNHPSGNSEPSAADK 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + L ++I DH+I+ SF ++ Sbjct: 132 AMTSQLRQALALVDIRTLDHVIVAGTRTTSFAERGLL 168 >gi|146278797|ref|YP_001168956.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17025] gi|145557038|gb|ABP71651.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17025] Length = 261 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 54/97 (55%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS+ DI Sbjct: 165 LFLDRKNVLIADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSEQDI 224 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I L I++HDH+I+G++ +SF+ + Sbjct: 225 AMTGQIQDAAATLGIVLHDHLIVGRERELSFRAQGYL 261 >gi|222112697|ref|YP_002554961.1| DNA repair protein Radc [Acidovorax ebreus TPSY] gi|221732141|gb|ACM34961.1| DNA repair protein RadC [Acidovorax ebreus TPSY] Length = 169 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI RGTID VY RE+V+ L L+A ++I+ HNHPSGNP PS AD Sbjct: 73 LFLDSQHRLIEYTEMFRGTIDSASVYPRELVKEALRLNAAAVIVSHNHPSGNPEPSAADR 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + +L +++ DHI++ + SF +I Sbjct: 133 ALTQRLKESLALVDVRTLDHIVVTGSSTTSFAERGLI 169 >gi|163793591|ref|ZP_02187566.1| DNA repair protein RadC [alpha proteobacterium BAL199] gi|159181393|gb|EDP65908.1| DNA repair protein RadC [alpha proteobacterium BAL199] Length = 229 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 48/97 (49%), Positives = 71/97 (73%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N LI DE Q RGT+DH P+Y RE+V+R LEL A+++I+VHNHPSG+P PS ADI Sbjct: 133 LYLDRKNRLIRDERQGRGTVDHTPLYPREVVKRALELGASAVIVVHNHPSGDPTPSQADI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+ L +I+HDH+I+ + SF+ ++ Sbjct: 193 VVTRQLGEALSTLGLILHDHLIVARGGHTSFRSAGLL 229 >gi|24114260|ref|NP_708770.1| RADC family DNA repair protein [Shigella flexneri 2a str. 301] gi|30064313|ref|NP_838484.1| RADC family DNA repair protein [Shigella flexneri 2a str. 2457T] gi|24053414|gb|AAN44477.1| putative RADC family DNA repair protein [Shigella flexneri 2a str. 301] gi|30042570|gb|AAP18294.1| putative RADC family DNA repair protein [Shigella flexneri 2a str. 2457T] gi|281602347|gb|ADA75331.1| putative RADC family DNA repair protein [Shigella flexneri 2002017] Length = 163 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 163 >gi|157157651|ref|YP_001465824.1| RadC family DNA repair protein [Escherichia coli E24377A] gi|298378469|ref|ZP_06988353.1| radC-like protein yeeS [Escherichia coli FVEC1302] gi|157079681|gb|ABV19389.1| DNA repair protein, RadC family [Escherichia coli E24377A] gi|298280803|gb|EFI22304.1| radC-like protein yeeS [Escherichia coli FVEC1302] Length = 158 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEYGLL 158 >gi|320201859|gb|EFW76434.1| putative radC-like protein [Escherichia coli EC4100B] Length = 124 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 28 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 87 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 88 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 124 >gi|170684134|ref|YP_001742412.1| RadC family DNA repair protein [Escherichia coli SMS-3-5] gi|170521852|gb|ACB20030.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5] Length = 159 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ N LIA E G+I V+ RE+V+R L +A ++IL HNHPSG+ +PS AD Sbjct: 63 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTSPSKADK 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L ++I V DH+I+G +SF ++ Sbjct: 123 TITQRLVQALQLVDIRVPDHLIVGGTQILSFAEHGLL 159 >gi|26247156|ref|NP_753196.1| putative radC-like protein yeeS [Escherichia coli CFT073] gi|331673519|ref|ZP_08374284.1| DNA repair protein, RADC family [Escherichia coli TA280] gi|26107557|gb|AAN79756.1|AE016759_30 Putative radC-like protein yeeS [Escherichia coli CFT073] gi|307553028|gb|ADN45803.1| DNA repair protein [Escherichia coli ABU 83972] gi|331069313|gb|EGI40703.1| DNA repair protein, RADC family [Escherichia coli TA280] Length = 158 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|309704613|emb|CBJ03963.1| putative radC DNA repair protein [Escherichia coli ETEC H10407] Length = 148 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 148 >gi|296100494|ref|YP_003610640.1| DNA repair protein RadC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295054953|gb|ADF59691.1| DNA repair protein RadC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 222 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N ++ GT+ HV V+ REIV+ ++L+A +IL HNHPSG PS AD Sbjct: 126 IFLDNRNRVLKHSHLFSGTLSHVEVHPREIVREAIKLNAAGVILAHNHPSGCAEPSRADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I+ ++I V DH+IIG+ ++SF I Sbjct: 186 EITDRIVKCCQFMDIRVLDHLIIGRGEYLSFAEHGWI 222 >gi|325928297|ref|ZP_08189499.1| DNA replication and repair protein RadC [Xanthomonas perforans 91-118] gi|325541334|gb|EGD12874.1| DNA replication and repair protein RadC [Xanthomonas perforans 91-118] Length = 243 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + IA E GTID ++ RE+V+R L +A ++I+ HNHPSGNP PS+AD Sbjct: 146 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ +L ++I + DH +IG VSF + Sbjct: 206 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSFAERGWL 242 >gi|221640666|ref|YP_002526928.1| DNA repair protein RadC [Rhodobacter sphaeroides KD131] gi|221161447|gb|ACM02427.1| DNA repair protein [Rhodobacter sphaeroides KD131] Length = 254 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PSD D+ Sbjct: 158 LYLDRKNVLIADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSDQDV 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I L I++HDH++IG+ VSF+G + Sbjct: 218 AMTAQIQEAAATLGIVLHDHLVIGRGREVSFRGQGYL 254 >gi|218692437|ref|YP_002400649.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli ED1a] gi|218702808|ref|YP_002410437.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli IAI39] gi|254162884|ref|YP_003045992.1| putative DNA repair protein [Escherichia coli B str. REL606] gi|218372794|emb|CAR20673.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli IAI39] gi|218430001|emb|CAR10981.2| putative DNA repair protein; CP4-44 prophage [Escherichia coli ED1a] gi|253974785|gb|ACT40456.1| predicted DNA repair protein [Escherichia coli B str. REL606] Length = 148 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148 >gi|311278018|ref|YP_003940249.1| DNA repair protein RadC [Enterobacter cloacae SCF1] gi|308747213|gb|ADO46965.1| DNA repair protein RadC [Enterobacter cloacae SCF1] Length = 160 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ N LIA E+ G+I V+ RE+V+R L +A ++IL HNHPSG+ PS AD Sbjct: 64 LYLNQQNQLIAHEILFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L ++I V DH+I+G +SF ++ Sbjct: 124 TITQRLVQALQLIDIRVPDHLIVGGSQILSFAEHGLL 160 >gi|256024477|ref|ZP_05438342.1| putative radC-like protein YeeS [Escherichia sp. 4_1_40B] Length = 158 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|268593307|ref|ZP_06127528.1| DNA repair protein RadC [Providencia rettgeri DSM 1131] gi|291311004|gb|EFE51457.1| DNA repair protein RadC [Providencia rettgeri DSM 1131] Length = 239 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N +I E +GT++ V V+ REI++ ++++A IIL HNHPSGNP PS AD Sbjct: 143 IFLNNKNQIICHEELFKGTLNKVEVHPREIIRFAIKMNANGIILAHNHPSGNPEPSTADR 202 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I + DH ++G VSF + Sbjct: 203 QVTERIQRACAIMGIKLLDHFVVGHKQCVSFVERGWL 239 >gi|20090827|ref|NP_616902.1| DNA repair protein RadC [Methanosarcina acetivorans C2A] gi|25009026|sp|Q8TPD4|Y1979_METAC RecName: Full=UPF0758 protein MA_1979 gi|19915895|gb|AAM05382.1| DNA repair protein [Methanosarcina acetivorans C2A] Length = 229 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N ++ +EV S G+++ V+ RE+ + L S+ S+I+VHNHPSG+P+PS DI Sbjct: 132 LYLDTKNQILKEEVVSIGSLNASIVHPREVFKSALLESSASVIMVHNHPSGDPSPSREDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I + DHIIIG +VS K + Sbjct: 192 MVTEKLVEGGKLLGIDILDHIIIGDGRYVSLKDEGFV 228 >gi|300905935|ref|ZP_07123664.1| putative DNA repair protein RadC [Escherichia coli MS 84-1] gi|300402241|gb|EFJ85779.1| putative DNA repair protein RadC [Escherichia coli MS 84-1] Length = 158 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGEPLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|123440463|ref|YP_001004457.1| DNA repair protein RadC [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166218800|sp|A1JHX2|Y063_YERE8 RecName: Full=UPF0758 protein YE0063 gi|122087424|emb|CAL10205.1| putative DNA repair protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 222 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I E GTI V ++ REIV+ L+++A ++IL HNHPSG PS AD Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEIHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT +I + L+I V DH+++G+ VSF + Sbjct: 186 LMTTQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 222 >gi|296104052|ref|YP_003614198.1| putative DNA repair protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058511|gb|ADF63249.1| putative DNA repair protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 158 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LIA E GTI+ V+ RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L ++I V DH+I+G SF ++ Sbjct: 122 ALTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 >gi|313648066|gb|EFS12512.1| DNA repair RadC family protein [Shigella flexneri 2a str. 2457T] Length = 158 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|218696658|ref|YP_002404325.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli 55989] gi|218353390|emb|CAU99429.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli 55989] Length = 148 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 148 >gi|56415619|ref|YP_152694.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364546|ref|YP_002144183.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|73913739|sp|Q5PC30|YICR_SALPA RecName: Full=UPF0758 protein yicR gi|238690754|sp|B5BI12|YICR_SALPK RecName: Full=UPF0758 protein yicR gi|56129876|gb|AAV79382.1| putative DNA repair protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096023|emb|CAR61610.1| putative DNA repair protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 221 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT++HV V+ REIV+ ++L+A+++IL HNHPSG PS AD Sbjct: 125 IFLDVQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I ++I V DH+IIG+ +VSF I Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >gi|21242914|ref|NP_642496.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306] gi|21108411|gb|AAM37032.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306] Length = 169 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI RGTID V+ RE+V+ L +A ++IL HNHPSG+P PS AD Sbjct: 73 LFLDTQHRLIEYTEMFRGTIDSASVHPREVVKEALRTNAAAVILAHNHPSGHPEPSTADR 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ DHII+ A SF ++ Sbjct: 133 ALTRQLKAALELVDVRTLDHIIVAGGANTSFAERGLL 169 >gi|315296395|gb|EFU55695.1| DNA repair protein RadC family protein [Escherichia coli MS 16-3] Length = 159 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 63 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 123 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 159 >gi|294675779|ref|YP_003576394.1| DNA repair protein RadC [Rhodobacter capsulatus SB 1003] gi|294474599|gb|ADE83987.1| DNA repair protein RadC [Rhodobacter capsulatus SB 1003] Length = 254 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 74/97 (76%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL A+++ILVHNHPSG+P PS ADI Sbjct: 158 LFLDRKNLLIADEEQARGTVDHVPVYPREVVKRALELDASALILVHNHPSGDPTPSQADI 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I L +++HDH++IGK +SF+ ++ Sbjct: 218 AMTDQIRHAAEALGLVLHDHLVIGKGRELSFRAEGLL 254 >gi|110640540|ref|YP_668268.1| RadC-like DNA repair protein [Escherichia coli 536] gi|191171181|ref|ZP_03032731.1| DNA repair protein, RadC family [Escherichia coli F11] gi|28316258|emb|CAD66203.1| hypothetical protein [Escherichia coli] gi|110342132|gb|ABG68369.1| RadC-like DNA repair protein [Escherichia coli 536] gi|190908481|gb|EDV68070.1| DNA repair protein, RadC family [Escherichia coli F11] Length = 158 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|331654132|ref|ZP_08355132.1| putative DNA repair protein [Escherichia coli M718] gi|331047514|gb|EGI19591.1| putative DNA repair protein [Escherichia coli M718] Length = 163 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163 >gi|309704104|emb|CBJ03451.1| putative radC-like protein [Escherichia coli ETEC H10407] Length = 158 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+IIG SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 158 >gi|332159686|ref|YP_004296263.1| DNA repair protein RadC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318603785|emb|CBY25283.1| DNA repair protein RadC [Yersinia enterocolitica subsp. palearctica Y11] gi|325663916|gb|ADZ40560.1| DNA repair protein RadC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859989|emb|CBX70317.1| DNA repair protein radC homolog [Yersinia enterocolitica W22703] Length = 222 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I E GTI V ++ REIV+ L+++A ++IL HNHPSG PS AD Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEIHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT +I + L+I V DH+++G+ VSF + Sbjct: 186 LMTTQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 222 >gi|254515838|ref|ZP_05127898.1| DNA repair protein RadC family [gamma proteobacterium NOR5-3] gi|219675560|gb|EED31926.1| DNA repair protein RadC family [gamma proteobacterium NOR5-3] Length = 224 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ + GT+D VY RE+V R L+ A +IIL HNHPSG PS AD Sbjct: 128 LFLDSQHRLLHCDDLFLGTLDGAAVYPREVVVRALQYRAAAIILAHNHPSGLTQPSTADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH+I+G+ SF +I Sbjct: 188 RITQRLCDALALVDVPVLDHVIVGRGKCYSFAEAGLI 224 >gi|33151902|ref|NP_873255.1| DNA repair protein RadC [Haemophilus ducreyi 35000HP] gi|38372438|sp|Q7VN51|Y732_HAEDU RecName: Full=UPF0758 protein HD_0732 gi|33148123|gb|AAP95644.1| DNA repair protein [Haemophilus ducreyi 35000HP] Length = 223 Score = 134 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 41/96 (42%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LI E GTI+ V+ REI++ L+ +A +II+ HNHPSGN S AD Sbjct: 124 LFLDNQNRLIKKEKMFYGTINQATVHPREIIKEALKCNAAAIIVAHNHPSGNCTASQADR 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +TQ I + + + DHII+GK ++ SF+ R Sbjct: 184 QLTQKIKAACHLVEVRFVDHIIVGKGSYFSFEEERF 219 >gi|313109023|ref|ZP_07794996.1| RadC-like protein [Pseudomonas aeruginosa 39016] gi|310881498|gb|EFQ40092.1| RadC-like protein [Pseudomonas aeruginosa 39016] Length = 169 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LF+D + LI GTID VY RE+V+ L L+A ++++ HNHPSGNP PS AD Sbjct: 73 LFMDTRHRLIEYREMFHGTIDGASVYPREVVKEALRLNAAAVVVSHNHPSGNPEPSAADR 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHII+ + SF +I Sbjct: 133 ALTQRLKEALGLVDVRVLDHIIVAGNETASFAEHGLI 169 >gi|301304730|ref|ZP_07210837.1| putative DNA repair protein RadC [Escherichia coli MS 124-1] gi|300839961|gb|EFK67721.1| putative DNA repair protein RadC [Escherichia coli MS 124-1] gi|315252324|gb|EFU32292.1| putative DNA repair protein RadC [Escherichia coli MS 85-1] Length = 158 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGEPLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|218561228|ref|YP_002394141.1| DNA repair protein; CP4-44 prophage [Escherichia coli S88] gi|218367997|emb|CAR05797.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli S88] Length = 148 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 148 >gi|194426265|ref|ZP_03058820.1| DNA repair protein, RadC family [Escherichia coli B171] gi|194415573|gb|EDX31840.1| DNA repair protein, RadC family [Escherichia coli B171] gi|323161557|gb|EFZ47445.1| DNA repair protein RadC family protein [Escherichia coli E128010] Length = 158 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADQ 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|91211289|ref|YP_541275.1| hypothetical protein UTI89_C2276 [Escherichia coli UTI89] gi|91213942|ref|YP_543928.1| hypothetical protein UTI89_C4994 [Escherichia coli UTI89] gi|110644738|ref|YP_672468.1| putative DNA repair protein [Escherichia coli 536] gi|191170846|ref|ZP_03032398.1| DNA repair protein, RadC family [Escherichia coli F11] gi|23954299|emb|CAD42098.1| hypothetical protein [Escherichia coli] gi|91072863|gb|ABE07744.1| hypothetical protein UTI89_C2276 [Escherichia coli UTI89] gi|91075516|gb|ABE10397.1| hypothetical protein UTI89_C4994 [Escherichia coli UTI89] gi|110346330|gb|ABG72567.1| putative DNA repair protein [Escherichia coli 536] gi|190909070|gb|EDV68657.1| DNA repair protein, RadC family [Escherichia coli F11] gi|307626452|gb|ADN70756.1| putative DNA repair protein [Escherichia coli UM146] gi|307629456|gb|ADN73760.1| putative DNA repair protein [Escherichia coli UM146] gi|330907975|gb|EGH36494.1| putative radC-like protein yeeS [Escherichia coli AA86] Length = 158 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|323152386|gb|EFZ38674.1| DNA repair radC domain protein [Escherichia coli EPECa14] Length = 148 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 148 >gi|306814130|ref|ZP_07448300.1| putative DNA repair protein [Escherichia coli NC101] gi|331656222|ref|ZP_08357184.1| intergenic-region protein [Escherichia coli TA206] gi|305852517|gb|EFM52966.1| putative DNA repair protein [Escherichia coli NC101] gi|307552078|gb|ADN44853.1| putative radC-like protein [Escherichia coli ABU 83972] gi|331054470|gb|EGI26479.1| intergenic-region protein [Escherichia coli TA206] Length = 158 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|218672510|ref|ZP_03522179.1| DNA repair protein RadC [Rhizobium etli GR56] Length = 274 Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 69/97 (71%), Positives = 80/97 (82%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ II L+I VHDHIIIGKD VS KGL++I Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274 >gi|300824031|ref|ZP_07104152.1| putative DNA repair protein RadC [Escherichia coli MS 119-7] gi|300523421|gb|EFK44490.1| putative DNA repair protein RadC [Escherichia coli MS 119-7] Length = 158 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|218698082|ref|YP_002405749.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli 55989] gi|218354814|emb|CAV01931.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli 55989] Length = 148 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 148 >gi|153870452|ref|ZP_01999852.1| DNA repair protein RadC [Beggiatoa sp. PS] gi|152073088|gb|EDN70154.1| DNA repair protein RadC [Beggiatoa sp. PS] Length = 242 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E GTID VY RE+V+ L+ +A ++IL HNHPSG PS+ADI Sbjct: 146 LFLDNKHRVIKFEELFYGTIDGASVYPREVVKHTLQWNAAALILAHNHPSGVAEPSEADI 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ + L+ +++ V DH +IG VS +I Sbjct: 206 SITQRLREALSLIDVRVLDHFVIGDGYCVSLMERGLI 242 >gi|332112547|gb|EGJ12340.1| hypothetical protein RBXJA2T_18503 [Rubrivivax benzoatilyticus JA2] Length = 225 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GT+ VY RE+ +R L L+A ++IL HNHPSG PS AD Sbjct: 129 LFLDSQHRLIVMEEMFHGTLTQTSVYPREVARRALALNAGAVILAHNHPSGVAEPSRADE 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L L++ V DH+++G+ VS ++ Sbjct: 189 FLTQTLRQALQLLDVRVLDHLVVGRGQVVSMAERGLV 225 >gi|15801143|ref|NP_287160.1| RadC family DNA repair protein [Escherichia coli O157:H7 EDL933] gi|12514552|gb|AAG55772.1|AE005313_7 putative DNA repair protein, RADC family [Escherichia coli O157:H7 str. EDL933] Length = 158 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETXFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|218682712|ref|ZP_03530313.1| DNA repair protein RadC [Rhizobium etli CIAT 894] Length = 278 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 66/97 (68%), Positives = 80/97 (82%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI Sbjct: 182 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAMILVHNHPSGDPTPSRADI 241 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ II L+I VHDH+IIGKD VS KGL+++ Sbjct: 242 DMTKVIIDAAKALDITVHDHVIIGKDGHVSLKGLKLM 278 >gi|77464752|ref|YP_354256.1| DNA repair protein RadC [Rhodobacter sphaeroides 2.4.1] gi|77389170|gb|ABA80355.1| DNA repair protein [Rhodobacter sphaeroides 2.4.1] Length = 254 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PSD D+ Sbjct: 158 LYLDRKNVLIADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSDQDV 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I + L I++HDH++IG+ VSF+G + Sbjct: 218 AMTAQIQEAASTLGIVLHDHLVIGRGREVSFRGQGYL 254 >gi|153833510|ref|ZP_01986177.1| DNA repair protein [Vibrio harveyi HY01] gi|148870161|gb|EDL69102.1| DNA repair protein [Vibrio harveyi HY01] Length = 157 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + +GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157 >gi|197334055|ref|YP_002154894.1| DNA repair protein RadC [Vibrio fischeri MJ11] gi|238690291|sp|B5FFF6|Y123_VIBFM RecName: Full=UPF0758 protein VFMJ11_0123 gi|197315545|gb|ACH64992.1| DNA repair protein RadC [Vibrio fischeri MJ11] Length = 224 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ GTID VY RE+V+R ++ +A +IIL HNHPSG PS AD Sbjct: 128 LFLDNQHRVLKGEILFEGTIDAAAVYPREVVKRSIDYNAAAIILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + ++I V DH +IG VSF I Sbjct: 188 RITKRISDAVELVDIRVLDHFVIGDGEIVSFAERGWI 224 >gi|157156526|ref|YP_001464352.1| RadC family DNA repair protein [Escherichia coli E24377A] gi|157078556|gb|ABV18264.1| DNA repair protein, RadC family [Escherichia coli E24377A] Length = 158 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVIPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+IIG SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 158 >gi|238794408|ref|ZP_04638019.1| DNA repair protein radC [Yersinia intermedia ATCC 29909] gi|238726309|gb|EEQ17852.1| DNA repair protein radC [Yersinia intermedia ATCC 29909] Length = 222 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I E GTI V V+ REIV+ L+++A ++IL HNHPSG PS AD Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I + L+I V DH+++G+ VSF + Sbjct: 186 LITTQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 222 >gi|323497063|ref|ZP_08102086.1| hypothetical protein VISI1226_16688 [Vibrio sinaloensis DSM 21326] gi|323317907|gb|EGA70895.1| hypothetical protein VISI1226_16688 [Vibrio sinaloensis DSM 21326] Length = 214 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + +I+ E +GTID VY RE+V+R LE +A ++I+ HNHPSG PS +D Sbjct: 118 LYLDNQHRVISGESLFQGTIDAASVYPREVVKRSLEHNAAAVIIAHNHPSGVAEPSQSDR 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L ++I + DH ++G VSF I Sbjct: 178 RITRRISDALALVDIRILDHFVVGDGEIVSFAERGWI 214 >gi|86357475|ref|YP_469367.1| DNA repair protein RadC [Rhizobium etli CFN 42] gi|123512146|sp|Q2K946|Y1848_RHIEC RecName: Full=UPF0758 protein RHE_CH01848 gi|86281577|gb|ABC90640.1| DNA repair protein [Rhizobium etli CFN 42] Length = 274 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 69/97 (71%), Positives = 80/97 (82%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ II L+I VHDHIIIGKD VS KGL++I Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274 >gi|238789557|ref|ZP_04633341.1| DNA repair protein radC [Yersinia frederiksenii ATCC 33641] gi|238722310|gb|EEQ13966.1| DNA repair protein radC [Yersinia frederiksenii ATCC 33641] Length = 235 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I E GTI V V+ REIV+ L+++A ++IL HNHPSG PS AD Sbjct: 139 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVRAALKVNAAALILAHNHPSGKAEPSQADR 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT ++ + L+I V DH+++G+ VSF + Sbjct: 199 LMTTQVVKACSLLDIRVLDHLVVGRGECVSFAERGWL 235 >gi|218560008|ref|YP_002392921.1| DNA repair protein; CP4-44 prophage [Escherichia coli S88] gi|218366777|emb|CAR04544.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli S88] Length = 148 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 148 >gi|188532227|ref|YP_001906024.1| DNA repair protein RadC [Erwinia tasmaniensis Et1/99] gi|188027269|emb|CAO95112.1| DNA repair protein RadC [Erwinia tasmaniensis Et1/99] Length = 223 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F D + +I GT++ V V+ REIV+ L+ +A ++IL HNHPSG PS AD Sbjct: 127 IFFDNQHRVIHTSEMFSGTLNSVEVHPREIVREALKRNAAALILAHNHPSGLAEPSRADR 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ I+ +NI V DH++IG+ +VSF + Sbjct: 187 DITQQIVHACALMNIRVLDHMVIGRGEYVSFAERGWM 223 >gi|225175173|ref|ZP_03729169.1| DNA repair protein RadC [Dethiobacter alkaliphilus AHT 1] gi|225169349|gb|EEG78147.1| DNA repair protein RadC [Dethiobacter alkaliphilus AHT 1] Length = 232 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N ++ E S G+++ V+ RE+ + + + SIIL+HNHPSG+P PS D+ Sbjct: 133 IMLDTKNKVLGIEEISIGSLNTSLVHPREVFRPAIRKACASIILIHNHPSGDPTPSREDL 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DHIIIG F+SF+ ++ Sbjct: 193 DVTRRLREAGRLIGIEILDHIIIGDGKFISFREKGLL 229 >gi|152972484|ref|YP_001337630.1| DNA repair protein RadC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238897079|ref|YP_002921825.1| DNA repair protein RadC [Klebsiella pneumoniae NTUH-K2044] gi|329996935|ref|ZP_08302632.1| DNA repair protein RadC [Klebsiella sp. MS 92-3] gi|166218784|sp|A6TFM9|Y3939_KLEP7 RecName: Full=UPF0758 protein KPN78578_39390 gi|150957333|gb|ABR79363.1| DNA repair protein RadC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549407|dbj|BAH65758.1| DNA repair protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328539225|gb|EGF65254.1| DNA repair protein RadC [Klebsiella sp. MS 92-3] Length = 221 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N ++ GT+ HV V+ REIV+ ++++A ++IL HNHPSG+P PS AD Sbjct: 125 IFLDNQNRVLKHSRLFSGTLSHVEVHPREIVREAIKVNAAAVILAHNHPSGSPEPSQADR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I + I V DH++IG+ A+VSF I Sbjct: 185 LITERVIKCCRFMEIRVLDHLVIGRGAYVSFAERGWI 221 >gi|213425229|ref|ZP_03357979.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 198 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT++HV V+ EIV+ ++L+A+++IL HNHPSG PS AD Sbjct: 102 IFLDAQHRVLQHSRLFSGTLNHVEVHPCEIVREAIKLNASAVILAHNHPSGCAEPSKADK 161 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I ++I V DH+IIG+ +VSF I Sbjct: 162 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 198 >gi|91772435|ref|YP_565127.1| DNA repair protein RadC [Methanococcoides burtonii DSM 6242] gi|121684487|sp|Q12YU9|Y382_METBU RecName: Full=UPF0758 protein Mbur_0382 gi|91711450|gb|ABE51377.1| DNA repair protein RadC [Methanococcoides burtonii DSM 6242] Length = 229 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N +I +EV S G+++ V+ RE+ + L S+ S+IL HNHPSG+P PS DI Sbjct: 132 LYLDTKNNIIKEEVISIGSLNANIVHPREVFKSALMESSASVILTHNHPSGDPAPSREDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I V DH+IIG +VS K I Sbjct: 192 AVTEKLVEGGKILGISVLDHVIIGDGRYVSLKEEGYI 228 >gi|86146760|ref|ZP_01065080.1| DNA repair protein [Vibrio sp. MED222] gi|85835410|gb|EAQ53548.1| DNA repair protein [Vibrio sp. MED222] Length = 156 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + LI E +GTID VY RE+V+ L+ +A ++I HNHPSG+P PS AD Sbjct: 61 MLLDNQHRLIEFEELFQGTIDAASVYPREVVKTALKANAAAVIFAHNHPSGDPEPSQADK 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DHI++G + SF + Sbjct: 121 RITTRLQDALALIDVRVLDHIVVG-EQCTSFAERGWL 156 >gi|262040687|ref|ZP_06013925.1| DNA repair protein RadC [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042051|gb|EEW43084.1| DNA repair protein RadC [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 221 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N ++ GT+ HV V+ REIV+ ++++A ++IL HNHPSG+P PS AD Sbjct: 125 IFLDNQNRVLKHSRLFSGTLSHVEVHPREIVREAIKVNAAAVILAHNHPSGSPEPSQADR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I + I V DH++IG+ A+VSF I Sbjct: 185 LITERVIKCCRFMEIRVLDHLVIGRGAYVSFAERGWI 221 >gi|323969877|gb|EGB65155.1| DNA repair protein RadC [Escherichia coli TA007] Length = 158 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|315618026|gb|EFU98618.1| DNA repair radC domain protein [Escherichia coli 3431] Length = 108 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 12 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 71 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 72 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 108 >gi|144897615|emb|CAM74479.1| DNA repair protein RadC [Magnetospirillum gryphiswaldense MSR-1] Length = 237 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 54/97 (55%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+LIADE+Q +GT+DH P+Y RE+V+R L+L+A++II+VHNHPSG+P PS ADI Sbjct: 141 LFLDRKNVLIADELQGQGTVDHTPLYPREVVKRALDLNASAIIMVHNHPSGDPAPSRADI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ + L + I+VHDH+IIG+ VSFK ++ Sbjct: 201 DMTKMVANALKGVGIVVHDHLIIGRKGHVSFKAQGLL 237 >gi|327192095|gb|EGE59073.1| DNA repair protein RadC [Rhizobium etli CNPAF512] Length = 274 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 68/97 (70%), Positives = 79/97 (81%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N+LIADEV RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 178 LFLDKRNVLIADEVHGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ II L+I VHDHIIIGKD VS KGL++I Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274 >gi|134298847|ref|YP_001112343.1| DNA repair protein RadC [Desulfotomaculum reducens MI-1] gi|134051547|gb|ABO49518.1| DNA replication and repair protein RadC [Desulfotomaculum reducens MI-1] Length = 231 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I E S GT++ V+ RE+ ++ + SA ++ILVHNHPSG+P PS DI Sbjct: 135 LLLNTKNHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGDPTPSREDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ +I + I V DHI++G D F S K +I Sbjct: 195 SLTKRLIEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231 >gi|218706553|ref|YP_002414072.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli UMN026] gi|218433650|emb|CAR14565.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli UMN026] Length = 148 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 148 >gi|260767607|ref|ZP_05876543.1| DNA repair protein RadC [Vibrio furnissii CIP 102972] gi|260617507|gb|EEX42690.1| DNA repair protein RadC [Vibrio furnissii CIP 102972] Length = 157 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + +GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157 >gi|261341753|ref|ZP_05969611.1| hypothetical protein ENTCAN_08232 [Enterobacter cancerogenus ATCC 35316] gi|288316121|gb|EFC55059.1| DNA repair protein RadC [Enterobacter cancerogenus ATCC 35316] Length = 221 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N ++ GT+ HV V+ REIV+ ++++A +IL HNHPSG PS AD Sbjct: 125 IFLDNKNRVLKHCHLFSGTLSHVEVHPREIVREAIKVNAAGVILAHNHPSGCAEPSRADK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II ++I V DH+IIG+ ++SF I Sbjct: 185 EITKRIIKCCQIMDIRVLDHLIIGRGEYLSFAEHGWI 221 >gi|56964380|ref|YP_176111.1| DNA repair protein RadC [Bacillus clausii KSM-K16] gi|73913732|sp|Q5WER0|Y2615_BACSK RecName: Full=UPF0758 protein ABC2615 gi|56910623|dbj|BAD65150.1| DNA repair protein RadC [Bacillus clausii KSM-K16] Length = 230 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + L+ S+ S+I +HNHPSG+P+PS DI Sbjct: 130 LYLNTKNHVIKQKTLFIGSLNASIVHPREVFKEALQSSSASVICLHNHPSGDPSPSPEDI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ + L I + DHII+G F+S K Sbjct: 190 SVTKRLRQAGAILGIELLDHIIVGDGCFISLKERGF 225 >gi|56459351|ref|YP_154632.1| hypothetical protein IL0240 [Idiomarina loihiensis L2TR] gi|73913736|sp|Q5QZB4|Y240_IDILO RecName: Full=UPF0758 protein IL0240 gi|56178361|gb|AAV81083.1| RadC [Idiomarina loihiensis L2TR] Length = 224 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + L+ E +GTI+ PVY RE+++ ++ +A ++IL HNHPSG PS AD Sbjct: 128 LLLDSQHRLLRYEELFQGTINAAPVYPREVIKLVMQYNAAAVILAHNHPSGVAEPSQADQ 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH ++G +SF ++ Sbjct: 188 RVTERVKKALTLIDVALLDHFVVGAGDPISFAERGLL 224 >gi|254241654|ref|ZP_04934976.1| DNA repair protein RadC [Pseudomonas aeruginosa 2192] gi|126195032|gb|EAZ59095.1| DNA repair protein RadC [Pseudomonas aeruginosa 2192] Length = 169 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LF+D + LI RGTID VY RE V+ L L+A ++I+ HNHPSGNP PS AD Sbjct: 73 LFMDTQHRLIEYAEMFRGTIDGASVYPRERVKEALRLNAAAVIVSHNHPSGNPEPSGADR 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH+I+ SF +I Sbjct: 133 ALTQRLKEALGLVDVRVLDHVIVAGTDTTSFAERGLI 169 >gi|117919701|ref|YP_868893.1| DNA repair protein RadC [Shewanella sp. ANA-3] gi|117612033|gb|ABK47487.1| DNA repair protein RadC [Shewanella sp. ANA-3] Length = 169 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI RGTID VY RE+V+ L L+A ++I HNHPSGN PS AD Sbjct: 73 LFLDSQHRLIEYTEMFRGTIDSASVYPREVVKEALRLNAAAVIFSHNHPSGNSEPSRADE 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ DH+I+ +SF +I Sbjct: 133 AITNRLKEALALVDVRSLDHVIVAGSDTMSFAERGLI 169 >gi|293390968|ref|ZP_06635302.1| DNA repair protein RadC [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951502|gb|EFE01621.1| DNA repair protein RadC [Aggregatibacter actinomycetemcomitans D7S-1] Length = 219 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A +IIL HNHPSG PS +D Sbjct: 123 LFLDNQHRLIKQERLFLGTINKAMVYPREIIKEALACNAAAIILAHNHPSGVAEPSISDK 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I + ++I V DH +IG + SF ++ Sbjct: 183 QITDTIRQAADLVDIRVLDHFVIGNGRYFSFAEQNLL 219 >gi|254692435|emb|CAR48078.1| hypothetical protein [Escherichia coli] Length = 148 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADQ 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 148 >gi|153800936|ref|ZP_01955522.1| DNA repair protein [Vibrio cholerae MZO-3] gi|124123527|gb|EAY42270.1| DNA repair protein [Vibrio cholerae MZO-3] Length = 157 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + +GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDNCTSFAERGWL 157 >gi|328543235|ref|YP_004303344.1| DNA repair protein RadC [Polymorphum gilvum SL003B-26A1] gi|326412981|gb|ADZ70044.1| DNA repair protein RadC [Polymorphum gilvum SL003B-26A1] Length = 236 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 64/97 (65%), Positives = 79/97 (81%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ RGT+DH PVY RE+++R LELSAT++ILVHNHPSG+P PS ADI Sbjct: 140 LFLDKRNGLIADEVQQRGTVDHTPVYPREVIRRALELSATAVILVHNHPSGDPTPSRADI 199 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I+ PL I VHDHII+G++ VSF+GL++I Sbjct: 200 QMTRQIVDIAKPLGIEVHDHIIVGREGQVSFRGLQLI 236 >gi|222148674|ref|YP_002549631.1| DNA repair protein RadC [Agrobacterium vitis S4] gi|221735660|gb|ACM36623.1| DNA repair protein [Agrobacterium vitis S4] Length = 278 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 69/97 (71%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 182 LFLDKRNTLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 241 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ II T PL I VHDH+IIGK S KGLR+I Sbjct: 242 EMTKTIIDTAKPLGITVHDHVIIGKQGHASLKGLRLI 278 >gi|242239772|ref|YP_002987953.1| DNA repair protein RadC [Dickeya dadantii Ech703] gi|242131829|gb|ACS86131.1| DNA repair protein RadC [Dickeya dadantii Ech703] Length = 169 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD H+ LI GTID VY RE+V+ L L+A ++IL HNHPSGNP PS AD Sbjct: 73 LFLDTHHQLIEYREMFHGTIDSASVYPREVVKEALRLNAAAVILSHNHPSGNPEPSSADK 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L + + DH+I+ VSF +I Sbjct: 133 ALTQRLKEALGLVEVRTLDHVIVAGADTVSFAERGLI 169 >gi|218561456|ref|YP_002394369.1| DNA repair protein; CP4-44 prophage [Escherichia coli S88] gi|218368225|emb|CAR06041.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli S88] Length = 148 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEYGLL 148 >gi|159184835|ref|NP_354601.2| DNA repair protein RadC [Agrobacterium tumefaciens str. C58] gi|25009015|sp|Q8UEZ6|Y1607_AGRT5 RecName: Full=UPF0758 protein Atu1607 gi|159140119|gb|AAK87386.2| DNA repair protein [Agrobacterium tumefaciens str. C58] Length = 280 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 69/97 (71%), Positives = 80/97 (82%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N+LIADEVQ +GT+DH PVY REIV+R LELS+T++IL+HNHPSG+P PS ADI Sbjct: 184 LFLDKRNVLIADEVQGQGTVDHTPVYPREIVRRALELSSTALILIHNHPSGDPTPSRADI 243 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ II T PL I VHDHIIIGKD SFKGLR+I Sbjct: 244 EMTKTIIDTAKPLGITVHDHIIIGKDGHASFKGLRLI 280 >gi|146280868|ref|YP_001171021.1| DNA repair protein RadC [Pseudomonas stutzeri A1501] gi|166218790|sp|A4VGS8|Y473_PSEU5 RecName: Full=UPF0758 protein PST_0473 gi|145569073|gb|ABP78179.1| DNA repair protein RadC [Pseudomonas stutzeri A1501] Length = 224 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A EV GTID VY R++V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDAKHRVLAFEVLFHGTIDGASVYPRQVVKRALAQNAAAVILTHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH I+G +S + Sbjct: 188 QLTQRLKDALALIDVRVLDHFIVGDGEPLSMAEYGWM 224 >gi|258623772|ref|ZP_05718729.1| RadC-like protein [Vibrio mimicus VM603] gi|258583895|gb|EEW08687.1| RadC-like protein [Vibrio mimicus VM603] Length = 157 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + +GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157 >gi|293376482|ref|ZP_06622711.1| DNA repair protein RadC [Turicibacter sanguinis PC909] gi|325842026|ref|ZP_08167563.1| DNA repair protein RadC [Turicibacter sp. HGF1] gi|292644904|gb|EFF62985.1| DNA repair protein RadC [Turicibacter sanguinis PC909] gi|325489748|gb|EGC92104.1| DNA repair protein RadC [Turicibacter sp. HGF1] Length = 223 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +I+ + G+++ V+ RE+ + ++ SA S+I HNHPSG+P PS+ DI Sbjct: 127 LFLDTKNYIISKKTIFIGSLNKAIVHPREVFKEAIKRSAASVICAHNHPSGDPTPSEQDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + I V DH+IIG D FVS K + Sbjct: 187 GLTHRLYEAGELIGIKVLDHLIIGDDQFVSLKEKGYL 223 >gi|118581981|ref|YP_903231.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379] gi|166218787|sp|A1AV03|Y3582_PELPD RecName: Full=UPF0758 protein Ppro_3582 gi|118504691|gb|ABL01174.1| DNA replication and repair protein RadC [Pelobacter propionicus DSM 2379] Length = 229 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N +I S G+++ V+ RE+ + ++ SA ++ILVHNHP+G+P PS DI Sbjct: 133 LLLDGKNRIIRRVQVSEGSLNQSIVHPREVFCQAVKESAAAVILVHNHPTGDPTPSQEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I V DHIIIG ++SF ++ Sbjct: 193 AITRRLKEAGEIMGIRVLDHIIIGDGEYLSFVERGVL 229 >gi|91228537|ref|ZP_01262458.1| DNA repair protein RadC [Vibrio alginolyticus 12G01] gi|91187913|gb|EAS74224.1| DNA repair protein RadC [Vibrio alginolyticus 12G01] Length = 155 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + LIA E GTID VY RE+++ L+++A ++I HNHPSG+ PS AD Sbjct: 60 MFLDNQHRLIAFEELFFGTIDSASVYPREVLKAALKINAAALIFAHNHPSGDATPSQADK 119 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L ++I V DHI++G A SF ++ Sbjct: 120 QITQRLKEALALVDIRVLDHIVVGDSAI-SFAERGLL 155 >gi|116251828|ref|YP_767666.1| DNA repair protein RadC [Rhizobium leguminosarum bv. viciae 3841] gi|226736628|sp|Q1MHK3|Y2068_RHIL3 RecName: Full=UPF0758 protein RL2068 gi|115256476|emb|CAK07560.1| putative DNA repair protein [Rhizobium leguminosarum bv. viciae 3841] Length = 275 Score = 133 bits (336), Expect = 6e-30, Method: Composition-based stats. Identities = 67/97 (69%), Positives = 80/97 (82%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+++LVHNHPSG+P PS ADI Sbjct: 179 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAMVLVHNHPSGDPTPSRADI 238 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ II L+I VHDHIIIGKD VS KGL++I Sbjct: 239 DMTKVIIDAAKALDITVHDHIIIGKDGHVSLKGLKLI 275 >gi|213029140|ref|ZP_03343587.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 129 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT++HV V+ REIV+ ++L+A+++IL HNHPSG PS AD Sbjct: 33 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 92 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I ++I V DH+IIG+ +VSF I Sbjct: 93 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 129 >gi|56476855|ref|YP_158444.1| RadC family DNA repair protein [Aromatoleum aromaticum EbN1] gi|56312898|emb|CAI07543.1| DNA repair protein similar to radC-family [Aromatoleum aromaticum EbN1] Length = 164 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E +GT+D VY R +VQR L L+A+++IL H HPSGN PS AD Sbjct: 68 VFLDNQHQVLAFEPLFKGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L +++ V DH I+GK + SF ++ Sbjct: 128 AITERLKSALATVDVRVLDHFIVGKGSPYSFAEAGLL 164 >gi|15836753|ref|NP_297441.1| DNA repair protein RadC [Xylella fastidiosa 9a5c] gi|9104937|gb|AAF82961.1|AE003868_7 DNA repair protein [Xylella fastidiosa 9a5c] Length = 232 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + I+ E GTI+ V+ RE+V+R L L+A ++I+ HNHPSGN PS AD Sbjct: 136 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADR 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ +++ + DH +IG A VSF + Sbjct: 196 MITQRLKNALDLIDVRLVDHFVIGDGAPVSFAEHGWL 232 >gi|124267582|ref|YP_001021586.1| DNA repair protein [Methylibium petroleiphilum PM1] gi|124260357|gb|ABM95351.1| DNA repair protein [Methylibium petroleiphilum PM1] Length = 164 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E +GT+D VY R +VQR L L+A+++IL H HPSGN PS AD Sbjct: 68 VFLDNQHQVLAFEPLFKGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L +++ V DH I+GK + SF ++ Sbjct: 128 AITERLKSALATVDVRVLDHFIVGKGSPYSFAEAGLL 164 >gi|260912778|ref|ZP_05919264.1| DNA repair protein RadC [Pasteurella dagmatis ATCC 43325] gi|260633156|gb|EEX51321.1| DNA repair protein RadC [Pasteurella dagmatis ATCC 43325] Length = 214 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD LI E GTI+ V+ REI++ L +A ++IL HNHPSG PS++D Sbjct: 118 LFLDNQQRLIKQEEMFLGTINMATVHPREIIKAALYCNAAALILAHNHPSGIAEPSESDK 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I + I + DH IIGK + SF ++ Sbjct: 178 RITQKIKNVAELMEIRILDHFIIGKGCYTSFAENGLL 214 >gi|302878190|ref|YP_003846754.1| DNA repair protein RadC [Gallionella capsiferriformans ES-2] gi|302580979|gb|ADL54990.1| DNA repair protein RadC [Gallionella capsiferriformans ES-2] Length = 205 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E GT+ VY RE+V+R L +A +++L HNHPSG PS AD Sbjct: 109 LFLDTQHRLIAAEELFHGTLTQTSVYPREVVKRALMHNAAAVLLAHNHPSGLAEPSQADQ 168 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ DH IIG ++ +SF +I Sbjct: 169 LLTNALKQALALVDVRALDHFIIGDESALSFAERGLI 205 >gi|167621616|ref|YP_001672124.1| DNA repair protein RadC [Caulobacter sp. K31] gi|167351739|gb|ABZ74465.1| DNA repair protein RadC [Caulobacter sp. K31] Length = 253 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADE+ + GT+DH PVY RE+V+R LE+SA+++ILVHNHPSG+ PS ADI Sbjct: 157 LFLDKKNQLIADEILNHGTVDHAPVYPREVVRRALEVSASAVILVHNHPSGDQTPSSADI 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ ++ L I VHDH+I+G+ SFK L +I Sbjct: 217 EMTKKVVDAARTLGIAVHDHVIVGRAEVASFKALGLI 253 >gi|300916723|ref|ZP_07133437.1| putative DNA repair protein RadC [Escherichia coli MS 115-1] gi|300415989|gb|EFJ99299.1| putative DNA repair protein RadC [Escherichia coli MS 115-1] Length = 158 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LIA E GTI+ V+ RE+V+R L +A ++ILVHNHPSG PS AD Sbjct: 62 LYLDNQNQLIAHETLFSGTINRTEVHPREVVKRALHFNAAAVILVHNHPSGETTPSQADK 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L ++I + DH+I+G SF ++ Sbjct: 122 ALTQRLTQVLQLVDIRIPDHLIVGGRQIYSFAEHGLL 158 >gi|283787728|ref|YP_003367593.1| DNA repair protein [Citrobacter rodentium ICC168] gi|282951182|emb|CBG90875.1| DNA repair protein [Citrobacter rodentium ICC168] Length = 221 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT+ HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 125 IFLDTQHKVIKHSRLFSGTLSHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I ++I V DH++IG+ +VSF I Sbjct: 185 LITERVIKCCQFMDIRVLDHLVIGRGEYVSFAERGWI 221 >gi|294625196|ref|ZP_06703838.1| DNA repair protein RadC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600515|gb|EFF44610.1| DNA repair protein RadC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 225 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + IA E GTID ++ RE+V+R L +A ++I+ HNHPSGNP PS+ D Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEPDR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ +L ++I + DH +IG VSF + Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSFAERGWL 224 >gi|220933291|ref|YP_002512190.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7] gi|254789667|sp|B8GTE3|Y100_THISH RecName: Full=UPF0758 protein Tgr7_0100 gi|219994601|gb|ACL71203.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7] Length = 223 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA E RGTID V+ RE+V+R L +A ++IL HNHPSG PS +D Sbjct: 128 LFLDNRHRVIAFEELFRGTIDGASVHPREVVRRALAHNAAALILAHNHPSGVAEPSRSDE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I V DH+++G + VSF ++ Sbjct: 188 AITRRLRDALALVDIRVLDHVVVGD-SLVSFAERGLL 223 >gi|238794329|ref|ZP_04637941.1| radC-like protein yeeS [Yersinia intermedia ATCC 29909] gi|238726323|gb|EEQ17865.1| radC-like protein yeeS [Yersinia intermedia ATCC 29909] Length = 159 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N L+A E GT+ H V+ RE+V+R L +A ++I HNHPSG PS AD Sbjct: 63 LYLNNQNQLLAHETLFTGTLSHTEVHPREVVKRALYFNAAAVIFAHNHPSGEVAPSQADK 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L + I V DH+I+G SF +I Sbjct: 123 AITQRLVQALMLVEIRVPDHLIVGGRQIFSFAEHGLI 159 >gi|260587686|ref|ZP_05853599.1| DNA repair protein RadC [Blautia hansenii DSM 20583] gi|331084025|ref|ZP_08333132.1| hypothetical protein HMPREF0992_02056 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541951|gb|EEX22520.1| DNA repair protein RadC [Blautia hansenii DSM 20583] gi|330402387|gb|EGG81957.1| hypothetical protein HMPREF0992_02056 [Lachnospiraceae bacterium 6_1_63FAA] Length = 231 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N L+ DE+ +GT++ REI + A I+LVHNHPSG+ PS AD+ Sbjct: 135 MMLDTKNHLLGDEMIFKGTVNSSLANPREIFLSAVSYHAVGILLVHNHPSGDCTPSQADV 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 + TQ + L I + DHIIIG ++SF+ I Sbjct: 195 DFTQRVKEAGELLGIPLLDHIIIGDCKYLSFREQGI 230 >gi|328471743|gb|EGF42620.1| DNA repair protein [Vibrio parahaemolyticus 10329] Length = 157 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + +GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFQGTLDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157 >gi|172046060|sp|A8FFU0|Y2444_BACP2 RecName: Full=UPF0758 protein BPUM_2444 Length = 224 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ G+++ V+ REI + + SA S I VHNHPSG+P PS DI Sbjct: 128 LYLNTKNQVLHKHTVFIGSLNSSIVHPREIFKEAFKRSAASFICVHNHPSGDPTPSREDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I + DH++IG FVS K + Sbjct: 188 EVTQRLFECGKLIGIQLLDHLVIGDQKFVSLKEKGYL 224 >gi|331654543|ref|ZP_08355543.1| intergenic-region protein [Escherichia coli M718] gi|331047925|gb|EGI20002.1| intergenic-region protein [Escherichia coli M718] Length = 163 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LI E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLITGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVIPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+IIG SF ++ Sbjct: 127 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 163 >gi|260581787|ref|ZP_05849584.1| DNA repair protein RadC [Haemophilus influenzae NT127] gi|260095380|gb|EEW79271.1| DNA repair protein RadC [Haemophilus influenzae NT127] Length = 234 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 138 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 234 >gi|290488|gb|AAA61991.1| differs from radC sequence in X63366; similar to S. aureus putative 25 kD protein [Escherichia coli] Length = 224 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 128 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224 >gi|218697844|ref|YP_002405511.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli 55989] gi|12643227|gb|AAK00479.1| unknown [Shigella flexneri 2a] gi|218354576|emb|CAV01492.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli 55989] Length = 148 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 148 >gi|37678709|ref|NP_933318.1| DNA repair protein [Vibrio vulnificus YJ016] gi|37197450|dbj|BAC93289.1| DNA repair protein [Vibrio vulnificus YJ016] Length = 157 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + +GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ + SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGNTCTSFAERGWL 157 >gi|134300388|ref|YP_001113884.1| DNA repair protein RadC [Desulfotomaculum reducens MI-1] gi|172044335|sp|A4J7K6|Y2549_DESRM RecName: Full=UPF0758 protein Dred_2549 gi|134053088|gb|ABO51059.1| DNA replication and repair protein RadC [Desulfotomaculum reducens MI-1] Length = 227 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N ++A E S GT++ V+ RE+ + + SA S+ILVHNHPSG+P PS DI Sbjct: 131 LLLNTKNQVLARETISIGTLNSSVVHPRELFKVAIRRSAASMILVHNHPSGDPTPSREDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I + I V DHIIIG + F S K +I Sbjct: 191 VLTKRLIEAGEIIGIDVLDHIIIGDNKFTSLKSKGLI 227 >gi|88705460|ref|ZP_01103171.1| DNA repair protein RadC [Congregibacter litoralis KT71] gi|88700550|gb|EAQ97658.1| DNA repair protein RadC [Congregibacter litoralis KT71] Length = 224 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E GT+D VY RE+V R L A +++L HNHPSG +PS AD Sbjct: 128 LFLDSQHHLLCCEDVFSGTLDGAAVYPREVVLRALHHRAAAVVLAHNHPSGLTHPSSADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ + L ++I V DH IIG+ SF ++ Sbjct: 188 HITQRLRDALALVDIRVLDHFIIGRGRSYSFAEAGLL 224 >gi|241204438|ref|YP_002975534.1| DNA repair protein RadC [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858328|gb|ACS55995.1| DNA repair protein RadC [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 275 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 67/97 (69%), Positives = 80/97 (82%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI Sbjct: 179 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATALILVHNHPSGDPTPSRADI 238 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ II L+I VHDH+IIGKD VS KGL++I Sbjct: 239 DMTKVIIDAAKALDITVHDHVIIGKDGHVSLKGLKLI 275 >gi|152994658|ref|YP_001339493.1| DNA repair protein RadC [Marinomonas sp. MWYL1] gi|189029397|sp|A6VSX9|Y624_MARMS RecName: Full=UPF0758 protein Mmwyl1_0624 gi|150835582|gb|ABR69558.1| DNA repair protein RadC [Marinomonas sp. MWYL1] Length = 224 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI + GTID VY RE+V+ L+ +A ++IL HNHPSG PS ADI Sbjct: 128 LFLDTQHRLIRYQELFMGTIDAAAVYPREVVKAALQYNAAAVILAHNHPSGIAEPSQADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I L+ +++ + DH ++G VS ++ Sbjct: 188 SITDKIKRALDLVDVRLLDHFVVGDGLPVSLAERGLV 224 >gi|310829102|ref|YP_003961459.1| DNA repair protein RadC [Eubacterium limosum KIST612] gi|308740836|gb|ADO38496.1| DNA repair protein RadC [Eubacterium limosum KIST612] Length = 234 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N +I E S GTI+ V+ RE+ + + A ++IL HNHPSG+P PS D Sbjct: 138 LLLDNKNKVIKTETISIGTINASLVHPREVFVKAIRQHAAAVILAHNHPSGDPKPSAEDR 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + L I V DH++IG +VSFK I Sbjct: 198 AITKRLLESGELLGIPVLDHVVIGGADYVSFKESGYI 234 >gi|217969374|ref|YP_002354608.1| DNA repair protein RadC [Thauera sp. MZ1T] gi|217506701|gb|ACK53712.1| DNA repair protein RadC [Thauera sp. MZ1T] Length = 164 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E +GT+D VY R +VQR L L+A+++IL H HPSGN PS AD Sbjct: 68 VFLDNQHQVLAFEPLFQGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L +++ V DH I+GK + SF ++ Sbjct: 128 AITERLKSALATVDVRVLDHFIVGKGSPYSFAEAGLL 164 >gi|121594529|ref|YP_986425.1| DNA repair protein RadC [Acidovorax sp. JS42] gi|120606609|gb|ABM42349.1| DNA repair protein RadC [Acidovorax sp. JS42] Length = 164 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E +GT+D VY R +VQR L L+A+++IL H HPSGN PS AD Sbjct: 68 VFLDNQHQVLAFEPLFKGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L +++ V DH I+GK + SF ++ Sbjct: 128 AITERLKSALATVDVRVLDHFIVGKGSPYSFAEAGLL 164 >gi|114330795|ref|YP_747017.1| DNA repair protein RadC [Nitrosomonas eutropha C91] gi|122314267|sp|Q0AHY0|Y782_NITEC RecName: Full=UPF0758 protein Neut_0782 gi|114307809|gb|ABI59052.1| DNA replication and repair protein RadC [Nitrosomonas eutropha C91] Length = 224 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + I E RGT+ VY RE+V+R L +A ++I HNHPSG PS AD Sbjct: 128 IFLDARHRTIMIEELFRGTLTQASVYPREVVKRALYHNAAAMIFAHNHPSGVAEPSRADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ++ L +++ V DH +IG + VSF +I Sbjct: 188 MLTQSLKQALALVDVKVLDHFVIGNNETVSFAERGLI 224 >gi|82779592|ref|YP_405941.1| putative DNA repair protein [Shigella dysenteriae Sd197] gi|309787459|ref|ZP_07682071.1| DNA repair RadC family protein [Shigella dysenteriae 1617] gi|81243740|gb|ABB64450.1| putative DNA repair protein [Shigella dysenteriae Sd197] gi|308925037|gb|EFP70532.1| DNA repair RadC family protein [Shigella dysenteriae 1617] Length = 158 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRSLYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 158 >gi|331654133|ref|ZP_08355133.1| putative DNA repair protein [Escherichia coli M718] gi|331047515|gb|EGI19592.1| putative DNA repair protein [Escherichia coli M718] Length = 105 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 9 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 68 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 69 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 105 >gi|327479136|gb|AEA82446.1| DNA repair protein RadC [Pseudomonas stutzeri DSM 4166] Length = 224 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A EV GTID VY R++V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDAKHRVLAFEVLFHGTIDGASVYPRQVVKRALAQNAAAVILTHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH I+G +S + Sbjct: 188 QLTQRLKDALALIDVRVLDHFIVGDGEPLSMAEYGWM 224 >gi|188578899|ref|YP_001915828.1| DNA repair protein RadC [Xanthomonas oryzae pv. oryzae PXO99A] gi|172044625|sp|Q5H5M1|Y495_XANOR RecName: Full=UPF0758 protein XOO0495 gi|238689548|sp|B2SS21|Y2919_XANOP RecName: Full=UPF0758 protein PXO_02919 gi|188523351|gb|ACD61296.1| DNA repair protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 225 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + IA E GTID ++ RE+V+R L +A ++I+ HNHPSGNP PS AD Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSKADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ +L ++I + DH +IG VS + Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSLAERGWL 224 >gi|59710733|ref|YP_203509.1| DNA repair protein RadC [Vibrio fischeri ES114] gi|71648820|sp|Q5E8M5|Y126_VIBF1 RecName: Full=UPF0758 protein VF_0126 gi|59478834|gb|AAW84621.1| protein associated with replication fork, possible DNA repair protein [Vibrio fischeri ES114] Length = 224 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ GTID VY RE+V+R ++ +A +IIL HNHPSG PS AD Sbjct: 128 LFLDNQHRVLKGEILFEGTIDVAAVYPREVVKRSIDYNAAAIILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + ++I V DH +IG VSF I Sbjct: 188 RITKRISDAVELVDIRVLDHFVIGDGEIVSFAERGWI 224 >gi|89110373|ref|AP_004153.1| protein associated with replication fork, possible DNA repair protein [Escherichia coli str. K-12 substr. W3110] gi|162135914|ref|NP_418095.4| conserved protein, UPF0758 family; not radC [Escherichia coli str. K-12 substr. MG1655] gi|170083146|ref|YP_001732466.1| protein associated with replication fork, DNA repair protein [Escherichia coli str. K-12 substr. DH10B] gi|238902729|ref|YP_002928525.1| protein associated with replication fork, possible DNA repair protein [Escherichia coli BW2952] gi|6686314|sp|P25531|YICR_ECOLI RecName: Full=UPF0758 protein yicR gi|229485552|sp|B1X972|YICR_ECODH RecName: Full=UPF0758 protein yicR gi|259551860|sp|C4ZXN0|YICR_ECOBW RecName: Full=UPF0758 protein yicR gi|85676404|dbj|BAE77654.1| protein associated with replication fork, possible DNA repair protein [Escherichia coli str. K12 substr. W3110] gi|87082300|gb|AAC76662.2| conserved protein, UPF0758 family; not radC [Escherichia coli str. K-12 substr. MG1655] gi|169890981|gb|ACB04688.1| protein associated with replication fork, possible DNA repair protein [Escherichia coli str. K-12 substr. DH10B] gi|238863294|gb|ACR65292.1| protein associated with replication fork, possible DNA repair protein [Escherichia coli BW2952] gi|260447343|gb|ACX37765.1| DNA repair protein RadC [Escherichia coli DH1] gi|315138220|dbj|BAJ45379.1| DNA repair protein RadC [Escherichia coli DH1] Length = 222 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|326405093|ref|YP_004285175.1| hypothetical protein ACMV_29460 [Acidiphilium multivorum AIU301] gi|325051955|dbj|BAJ82293.1| hypothetical protein ACMV_29460 [Acidiphilium multivorum AIU301] Length = 266 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 48/97 (49%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N L+ADEV SRGT++H VY+RE+V+R +E AT++ILVHNHPSG+P+PS D+ Sbjct: 165 IYLDNRNRLLADEVASRGTVNHTQVYVREVVRRAIETRATALILVHNHPSGDPSPSRDDV 224 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + + L+I +HDH+IIGK ++SF+ + Sbjct: 225 EMTREVQRAVALLDITLHDHVIIGKAGWLSFRREGFL 261 >gi|313200117|ref|YP_004038775.1| DNA repair protein radc [Methylovorus sp. MP688] gi|312439433|gb|ADQ83539.1| DNA repair protein RadC [Methylovorus sp. MP688] Length = 224 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N ++A E GT+ V+ REIV+R L +A ++IL HNHPSG PS AD Sbjct: 128 IFLDAQNRVLAHEEMFAGTLTQTSVHPREIVKRALYYNAGAVILAHNHPSGVAEPSRADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + T L+ +++ V DH ++ + +SF ++ Sbjct: 188 MITAQLKTALDLVDVRVLDHFVVAGNTTLSFAERGLL 224 >gi|218691142|ref|YP_002399354.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli ED1a] gi|331681607|ref|ZP_08382243.1| intergenic-region protein [Escherichia coli H299] gi|218428706|emb|CAR09496.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli ED1a] gi|331081181|gb|EGI52343.1| intergenic-region protein [Escherichia coli H299] Length = 148 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 148 >gi|238750954|ref|ZP_04612451.1| radC-like protein yeeS [Yersinia rohdei ATCC 43380] gi|238710868|gb|EEQ03089.1| radC-like protein yeeS [Yersinia rohdei ATCC 43380] Length = 159 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N L+A E GTI H V+ RE+V+R L +A ++I HNHPSG PS AD Sbjct: 63 LYLNNQNQLLAHETLFTGTISHTEVHPREVVKRALYFNAAAVIFAHNHPSGEVAPSQADK 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L + I V DH+I+G SF +I Sbjct: 123 AITQRLVQALMLVEIRVPDHLIVGGRQIFSFAEHGLI 159 >gi|220935036|ref|YP_002513935.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7] gi|219996346|gb|ACL72948.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7] Length = 168 Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI GTID V+ RE+V++ L L+A ++I+ HNHPSGNP PS AD Sbjct: 72 LFLDTRHRLIDYVEMFHGTIDAAEVHPREVVKQALRLNAAAVIVSHNHPSGNPEPSAADR 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT + L +++ DH+I+ SF +I Sbjct: 132 SMTAQLRQALALVDVRTLDHVIVAGTRTTSFAERGLI 168 >gi|58580118|ref|YP_199134.1| DNA repair protein RadC [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424712|gb|AAW73749.1| DNA repair protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 243 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + IA E GTID ++ RE+V+R L +A ++I+ HNHPSGNP PS AD Sbjct: 146 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSKADR 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ +L ++I + DH +IG VS + Sbjct: 206 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSLAERGWL 242 >gi|260584697|ref|ZP_05852443.1| DNA repair protein RadC [Granulicatella elegans ATCC 700633] gi|260157720|gb|EEW92790.1| DNA repair protein RadC [Granulicatella elegans ATCC 700633] Length = 228 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 52/96 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I ++ RG ++ V+ REI + + SA II+ HNHPSGN PS ADI Sbjct: 132 LFLNSKNEVIKKKIIFRGGLNQAVVHPREIFREAVRFSAARIIIGHNHPSGNVTPSQADI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 + T+ + + I + DH I+G + S K Sbjct: 192 DFTRRLSECGEMMGIELLDHFIVGDHTYCSLKEEGY 227 >gi|84622119|ref|YP_449491.1| DNA repair protein RadC [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|123523355|sp|Q2P8B0|Y462_XANOM RecName: Full=UPF0758 protein XOO0462 gi|84366059|dbj|BAE67217.1| DNA repair protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 225 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + IA E GTID ++ RE+V+R L +A ++I+ HNHPSGNP PS+AD Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ +L ++I + DH +IG VS + Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSLAERGWL 224 >gi|89098968|ref|ZP_01171848.1| DNA repair protein RadC [Bacillus sp. NRRL B-14911] gi|89086372|gb|EAR65493.1| DNA repair protein RadC [Bacillus sp. NRRL B-14911] Length = 223 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ + G+++ V+ RE+ + SA SII +HNHPSG+P PS DI Sbjct: 127 LYLNTKNQVLHKQTIFIGSLNASIVHPREVFKEAFRRSAASIICIHNHPSGDPAPSREDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I V DH+IIG++ +VS K + Sbjct: 187 EVTKRLAECGKIIGIDVLDHLIIGENKYVSLKEKGYL 223 >gi|157693205|ref|YP_001487667.1| DNA repair protein RadC [Bacillus pumilus SAFR-032] gi|157681963|gb|ABV63107.1| DNA repair protein RadC [Bacillus pumilus SAFR-032] Length = 232 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ G+++ V+ REI + + SA S I VHNHPSG+P PS DI Sbjct: 136 LYLNTKNQVLHKHTVFIGSLNSSIVHPREIFKEAFKRSAASFICVHNHPSGDPTPSREDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I + DH++IG FVS K + Sbjct: 196 EVTQRLFECGKLIGIQLLDHLVIGDQKFVSLKEKGYL 232 >gi|194017399|ref|ZP_03056011.1| DNA repair protein RadC [Bacillus pumilus ATCC 7061] gi|194011267|gb|EDW20837.1| DNA repair protein RadC [Bacillus pumilus ATCC 7061] Length = 232 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ G+++ V+ REI + + SA S I VHNHPSG+P PS DI Sbjct: 136 LYLNTKNQVLHKHTVFIGSLNSSIVHPREIFKEAFKRSAASFICVHNHPSGDPTPSREDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I + DH++IG FVS K + Sbjct: 196 EVTQRLFECGKLIGIQLLDHLVIGDQKFVSLKEKGYL 232 >gi|301648526|ref|ZP_07248250.1| DNA repair protein RadC domain protein [Escherichia coli MS 146-1] gi|301073429|gb|EFK88235.1| DNA repair protein RadC domain protein [Escherichia coli MS 146-1] Length = 116 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 20 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 79 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 80 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 116 >gi|258626046|ref|ZP_05720901.1| Putative radC-like protein [Vibrio mimicus VM603] gi|258581666|gb|EEW06560.1| Putative radC-like protein [Vibrio mimicus VM603] Length = 157 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + +GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157 >gi|170021431|ref|YP_001726385.1| DNA repair protein RadC [Escherichia coli ATCC 8739] gi|169756359|gb|ACA79058.1| DNA repair protein RadC [Escherichia coli ATCC 8739] Length = 159 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E GTI+H V+ RE+V+ L+ + ++I+ H+HPSG PS AD Sbjct: 63 LFLDNQHRLIAHETLFTGTINHTQVHPREVVKAGLKHNCAAVIVAHSHPSGEAEPSKADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L+ ++I + DH+++G SF + Sbjct: 123 QVTTRIQQALDLVDIRLLDHLVVGGMEITSFADRGWL 159 >gi|331005601|ref|ZP_08328971.1| DNA repair protein RadC [gamma proteobacterium IMCC1989] gi|330420574|gb|EGG94870.1| DNA repair protein RadC [gamma proteobacterium IMCC1989] Length = 224 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI + GT++ VY REIV+ L +A ++I HNHPSG PS AD Sbjct: 128 LFLDSQHQLIRYQEVFFGTVNAANVYPREIVKLALAYNACAVIFAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ + LN +++ V DH+I+G SF + Sbjct: 188 HITQELKDALNLIDVRVLDHLIVGDGDIHSFAENGWL 224 >gi|94499761|ref|ZP_01306297.1| DNA repair protein RadC [Oceanobacter sp. RED65] gi|94427962|gb|EAT12936.1| DNA repair protein RadC [Oceanobacter sp. RED65] Length = 223 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LIA E RGTID VY RE+V++ L +A ++I HNHPSG PSD+DI Sbjct: 128 LYLDNQHRLIAFEELFRGTIDGASVYPREVVKQVLAHNAAAVIFAHNHPSGIAEPSDSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH ++G +SF ++ Sbjct: 188 RITKRLQDALALVDVRVLDHFVVGD-EVISFAQRGML 223 >gi|82779128|ref|YP_405477.1| DNA repair protein RadC [Shigella dysenteriae Sd197] gi|81243276|gb|ABB63986.1| DNA repair protein [Shigella dysenteriae Sd197] Length = 224 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 128 IFLDSQHRVITHSRIFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224 >gi|323703616|ref|ZP_08115260.1| DNA repair protein RadC [Desulfotomaculum nigrificans DSM 574] gi|323531449|gb|EGB21344.1| DNA repair protein RadC [Desulfotomaculum nigrificans DSM 574] Length = 227 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +++ E S GT++ V+ RE+ + + SA +IIL HNHPSG+P PS DI Sbjct: 131 LLLNTKNRVLSKETISIGTLNSSMVHPRELFKIAIRRSAAAIILAHNHPSGDPTPSREDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I + I V DHIIIG + F S K +I Sbjct: 191 MLTKRLIEVGQIIGIDVLDHIIIGDNRFTSLKSKGLI 227 >gi|261867145|ref|YP_003255067.1| DNA repair protein RadC [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412477|gb|ACX81848.1| DNA repair protein RadC [Aggregatibacter actinomycetemcomitans D11S-1] Length = 219 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A +IIL HNHPSG PS +D Sbjct: 123 LFLDNQHRLIKQERLFLGTINKAMVYPREIIKEALACNAAAIILAHNHPSGVAEPSISDK 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I + ++I V DH +IG + SF ++ Sbjct: 183 QITDTIRQAADLVDIRVLDHFVIGNGRYFSFAEQNLL 219 >gi|254419835|ref|ZP_05033559.1| DNA repair protein RadC [Brevundimonas sp. BAL3] gi|196186012|gb|EDX80988.1| DNA repair protein RadC [Brevundimonas sp. BAL3] Length = 243 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 56/97 (57%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LDK N LI DEVQ+RGT+DH PVY RE+V+R LELSA+++ILVHNHPSG+P PS ADI Sbjct: 147 LYLDKKNQLILDEVQNRGTVDHAPVYPREVVRRALELSASALILVHNHPSGDPTPSRADI 206 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ LN+ VHDH+++G+D SFK L ++ Sbjct: 207 EITKQVVQAGRALNVEVHDHLVVGRDGVASFKQLGLM 243 >gi|237728935|ref|ZP_04559416.1| DNA repair protein radC [Citrobacter sp. 30_2] gi|226909557|gb|EEH95475.1| DNA repair protein radC [Citrobacter sp. 30_2] Length = 234 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F+D + +I GT+ HV V+ REIV+ ++++A+++IL HNHPSG PS AD Sbjct: 138 IFMDSQHRVIKHSKLFSGTLSHVEVHPREIVREAIKMNASAVILAHNHPSGCAEPSKADK 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ ++I V DH++IG+ +VSF I Sbjct: 198 LITERVVKCCQFMDIRVLDHLVIGRGEYVSFAERGWI 234 >gi|237704459|ref|ZP_04534940.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|226900825|gb|EEH87084.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294491633|gb|ADE90389.1| DNA repair protein, RadC family [Escherichia coli IHE3034] gi|307554072|gb|ADN46847.1| DNA repair protein [Escherichia coli ABU 83972] gi|323956170|gb|EGB51921.1| DNA repair protein RadC [Escherichia coli H263] Length = 158 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++ L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKCALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|89094938|ref|ZP_01167869.1| DNA repair protein RadC [Oceanospirillum sp. MED92] gi|89080804|gb|EAR60045.1| DNA repair protein RadC [Oceanospirillum sp. MED92] Length = 224 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E GTI+ VY REIV R L +A +++L HNHPSG PSDAD Sbjct: 128 LFLDNKHRVIQYENLFWGTINAAAVYPREIVSRALHHNAGAVVLAHNHPSGVAEPSDADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DH+++G SF ++ Sbjct: 188 QITLKLQKALALVDVRVIDHMVVGDGEVFSFAEQGVL 224 >gi|83950724|ref|ZP_00959457.1| DNA repair protein RadC [Roseovarius nubinhibens ISM] gi|83838623|gb|EAP77919.1| DNA repair protein RadC [Roseovarius nubinhibens ISM] Length = 250 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 56/96 (58%), Positives = 70/96 (72%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FLD N LIADE Q+RGT+DHVPVY RE+V+R L L+AT++ILVHNHPSG+P PS +DI Sbjct: 155 FLDTKNTLIADEDQARGTVDHVPVYPREVVKRALALNATALILVHNHPSGDPTPSQSDIA 214 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I L I +HDHIIIGK +SF+ ++ Sbjct: 215 MTAQIAQAAGSLGITLHDHIIIGKSRELSFRAEGLL 250 >gi|209921109|ref|YP_002295193.1| DNA repair protein RadC [Escherichia coli SE11] gi|300815123|ref|ZP_07095348.1| DNA repair protein RadC [Escherichia coli MS 107-1] gi|209914368|dbj|BAG79442.1| DNA repair protein [Escherichia coli SE11] gi|300532015|gb|EFK53077.1| DNA repair protein RadC [Escherichia coli MS 107-1] Length = 224 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224 >gi|22124012|ref|NP_667435.1| DNA repair protein RadC [Yersinia pestis KIM 10] gi|45439915|ref|NP_991454.1| DNA repair protein RadC [Yersinia pestis biovar Microtus str. 91001] gi|51594404|ref|YP_068595.1| DNA repair protein RadC [Yersinia pseudotuberculosis IP 32953] gi|108809484|ref|YP_653400.1| DNA repair protein RadC [Yersinia pestis Antiqua] gi|108813961|ref|YP_649728.1| DNA repair protein RadC [Yersinia pestis Nepal516] gi|145601096|ref|YP_001165172.1| DNA repair protein RadC [Yersinia pestis Pestoides F] gi|150260887|ref|ZP_01917615.1| putative DNA repair protein [Yersinia pestis CA88-4125] gi|153948496|ref|YP_001399062.1| DNA repair protein RadC [Yersinia pseudotuberculosis IP 31758] gi|162421088|ref|YP_001604695.1| DNA repair protein RadC [Yersinia pestis Angola] gi|165926061|ref|ZP_02221893.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str. F1991016] gi|165936188|ref|ZP_02224757.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str. IP275] gi|166011487|ref|ZP_02232385.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str. E1979001] gi|166213687|ref|ZP_02239722.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str. B42003004] gi|167402113|ref|ZP_02307590.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418902|ref|ZP_02310655.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426676|ref|ZP_02318429.1| DNA repair protein RadC [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170026362|ref|YP_001722867.1| DNA repair protein RadC [Yersinia pseudotuberculosis YPIII] gi|186893392|ref|YP_001870504.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+] gi|218927270|ref|YP_002345145.1| DNA repair protein RadC [Yersinia pestis CO92] gi|229836162|ref|ZP_04456330.1| protein associated with replication fork, possible DNA repair protein [Yersinia pestis Pestoides A] gi|229839898|ref|ZP_04460057.1| protein associated with replication fork, possible DNA repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841980|ref|ZP_04462135.1| protein associated with replication fork, possible DNA repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229904491|ref|ZP_04519602.1| protein associated with replication fork, possible DNA repair protein [Yersinia pestis Nepal516] gi|270488490|ref|ZP_06205564.1| DNA repair protein RadC [Yersinia pestis KIM D27] gi|294502156|ref|YP_003566218.1| DNA repair protein RadC [Yersinia pestis Z176003] gi|25009034|sp|Q8ZJP3|Y049_YERPE RecName: Full=UPF0758 protein YPO0049/y0092/YP_0050 gi|73913745|sp|Q66GD6|Y046_YERPS RecName: Full=UPF0758 protein YPTB0046 gi|123245478|sp|Q1C267|Y3493_YERPA RecName: Full=UPF0758 protein YPA_3493 gi|123372833|sp|Q1CD02|Y3801_YERPN RecName: Full=UPF0758 protein YPN_3801 gi|166218801|sp|A4TSD7|Y3856_YERPP RecName: Full=UPF0758 protein YPDSF_3856 gi|166918668|sp|A7FCT4|Y061_YERP3 RecName: Full=UPF0758 protein YpsIP31758_0061 gi|238687317|sp|A9R674|Y055_YERPG RecName: Full=UPF0758 protein YpAngola_A0055 gi|238688492|sp|B1JQX3|Y4155_YERPY RecName: Full=UPF0758 protein YPK_4155 gi|238691334|sp|B2JYN3|Y048_YERPB RecName: Full=UPF0758 protein YPTS_0048 gi|21956754|gb|AAM83686.1|AE013609_11 DNA repair protein [Yersinia pestis KIM 10] gi|45434770|gb|AAS60331.1| putative DNA repair protein [Yersinia pestis biovar Microtus str. 91001] gi|51587686|emb|CAH19286.1| putative DNA repair protein [Yersinia pseudotuberculosis IP 32953] gi|108777609|gb|ABG20128.1| DNA repair protein [Yersinia pestis Nepal516] gi|108781397|gb|ABG15455.1| putative DNA repair protein [Yersinia pestis Antiqua] gi|115345881|emb|CAL18739.1| putative DNA repair protein [Yersinia pestis CO92] gi|145212792|gb|ABP42199.1| DNA repair protein [Yersinia pestis Pestoides F] gi|149290295|gb|EDM40372.1| putative DNA repair protein [Yersinia pestis CA88-4125] gi|152959991|gb|ABS47452.1| DNA repair protein RadC [Yersinia pseudotuberculosis IP 31758] gi|162353903|gb|ABX87851.1| DNA repair protein RadC [Yersinia pestis Angola] gi|165915802|gb|EDR34410.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str. IP275] gi|165921921|gb|EDR39098.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str. F1991016] gi|165989633|gb|EDR41934.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str. E1979001] gi|166205089|gb|EDR49569.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str. B42003004] gi|166962896|gb|EDR58917.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048488|gb|EDR59896.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054365|gb|EDR64182.1| DNA repair protein RadC [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752896|gb|ACA70414.1| DNA repair protein RadC [Yersinia pseudotuberculosis YPIII] gi|186696418|gb|ACC87047.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+] gi|229678609|gb|EEO74714.1| protein associated with replication fork, possible DNA repair protein [Yersinia pestis Nepal516] gi|229690290|gb|EEO82344.1| protein associated with replication fork, possible DNA repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229696264|gb|EEO86311.1| protein associated with replication fork, possible DNA repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706610|gb|EEO92616.1| protein associated with replication fork, possible DNA repair protein [Yersinia pestis Pestoides A] gi|262360235|gb|ACY56956.1| DNA repair protein RadC [Yersinia pestis D106004] gi|262364182|gb|ACY60739.1| DNA repair protein RadC [Yersinia pestis D182038] gi|270336994|gb|EFA47771.1| DNA repair protein RadC [Yersinia pestis KIM D27] gi|294352615|gb|ADE62956.1| DNA repair protein RadC [Yersinia pestis Z176003] gi|320013403|gb|ADV96974.1| protein associated with replication fork, possible DNA repair protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 222 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I E GTI V V+ REIV+ L+++A ++IL HNHPSG PS AD Sbjct: 126 VFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I + L+I V DH+++G+ VSF + Sbjct: 186 LITTQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 222 >gi|289671096|ref|ZP_06492171.1| DNA repair protein RadC [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 225 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + IA E GTID ++ RE+V+R L +A ++I+ HNHPSGNP PS+AD Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ +L ++I + DH +IG VS + Sbjct: 188 AVTKRLLESLELVDIRLLDHFVIGDGRPVSLAERGWL 224 >gi|52081286|ref|YP_080077.1| DNA repair protein RadC [Bacillus licheniformis ATCC 14580] gi|52786665|ref|YP_092494.1| DNA repair protein RadC [Bacillus licheniformis ATCC 14580] gi|81690952|sp|Q65GL3|Y2933_BACLD RecName: Full=UPF0758 protein BLi02933/BL00636 gi|52004497|gb|AAU24439.1| DNA repair protein [Bacillus licheniformis ATCC 14580] gi|52349167|gb|AAU41801.1| RadC [Bacillus licheniformis ATCC 14580] Length = 224 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I G+++ V+ RE+ + L+ SA S I VHNHPSG+P PS DI Sbjct: 128 VYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEALKRSAASFICVHNHPSGDPAPSREDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + L I + DHIIIG FVS K + Sbjct: 188 EVTQRLHESGQLLGIELLDHIIIGDQKFVSLKEKGYL 224 >gi|330909700|gb|EGH38214.1| DNA repair protein RadC [Escherichia coli AA86] Length = 226 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 130 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 190 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 226 >gi|212712581|ref|ZP_03320709.1| hypothetical protein PROVALCAL_03676 [Providencia alcalifaciens DSM 30120] gi|212684797|gb|EEB44325.1| hypothetical protein PROVALCAL_03676 [Providencia alcalifaciens DSM 30120] Length = 221 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ + +I E +GTI+ V V+ REI++ + ++A++I+L HNHPSGNP PS AD Sbjct: 125 LFLNNQHQVICHEEMFKGTINRVEVHPREILRFAMRMNASAIVLAHNHPSGNPEPSMADK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + + I + DH ++G + +SF + Sbjct: 185 YVTEQIQGACDVMGIKLLDHFVVGHKSCISFAERGWL 221 >gi|194431265|ref|ZP_03063558.1| DNA repair protein RadC [Shigella dysenteriae 1012] gi|194420720|gb|EDX36796.1| DNA repair protein RadC [Shigella dysenteriae 1012] gi|332084498|gb|EGI89693.1| DNA repair protein radC [Shigella dysenteriae 155-74] Length = 222 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|82546001|ref|YP_409948.1| DNA repair protein RadC [Shigella boydii Sb227] gi|293463962|ref|ZP_06664376.1| DNA repair protein RadC [Escherichia coli B088] gi|300822408|ref|ZP_07102548.1| DNA repair protein RadC [Escherichia coli MS 119-7] gi|301325320|ref|ZP_07218827.1| DNA repair protein RadC [Escherichia coli MS 78-1] gi|301644304|ref|ZP_07244306.1| DNA repair protein RadC [Escherichia coli MS 146-1] gi|331644356|ref|ZP_08345485.1| DNA repair protein RadC [Escherichia coli H736] gi|331655270|ref|ZP_08356269.1| DNA repair protein RadC [Escherichia coli M718] gi|331675118|ref|ZP_08375875.1| DNA repair protein RadC [Escherichia coli TA280] gi|331679729|ref|ZP_08380399.1| DNA repair protein RadC [Escherichia coli H591] gi|81247412|gb|ABB68120.1| DNA repair protein [Shigella boydii Sb227] gi|291321594|gb|EFE61030.1| DNA repair protein RadC [Escherichia coli B088] gi|300525055|gb|EFK46124.1| DNA repair protein RadC [Escherichia coli MS 119-7] gi|300847847|gb|EFK75607.1| DNA repair protein RadC [Escherichia coli MS 78-1] gi|301077342|gb|EFK92148.1| DNA repair protein RadC [Escherichia coli MS 146-1] gi|315618659|gb|EFU99245.1| DNA repair protein radC [Escherichia coli 3431] gi|323160754|gb|EFZ46690.1| DNA repair protein radC [Escherichia coli E128010] gi|331036650|gb|EGI08876.1| DNA repair protein RadC [Escherichia coli H736] gi|331047285|gb|EGI19363.1| DNA repair protein RadC [Escherichia coli M718] gi|331068027|gb|EGI39425.1| DNA repair protein RadC [Escherichia coli TA280] gi|331072901|gb|EGI44226.1| DNA repair protein RadC [Escherichia coli H591] gi|332089352|gb|EGI94456.1| DNA repair protein radC [Shigella boydii 3594-74] gi|332104944|gb|EGJ08290.1| DNA repair protein RadC [Shigella sp. D9] Length = 224 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224 >gi|159046109|ref|YP_001534903.1| DNA repair protein RadC [Dinoroseobacter shibae DFL 12] gi|157913869|gb|ABV95302.1| DNA repair protein RadC [Dinoroseobacter shibae DFL 12] Length = 254 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 54/97 (55%), Positives = 71/97 (73%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N+LIADE Q+RGT+DHVPVY REI +R LEL+A+++ILVHNHPSG+P PS+ DI Sbjct: 158 LYLDNKNVLIADEAQARGTVDHVPVYPREIAKRALELNASALILVHNHPSGDPTPSEQDI 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I L + +HDH++IGK VSF+ + Sbjct: 218 TMTYAIRDAAEVLGLRLHDHLVIGKSREVSFRAEGYL 254 >gi|332084818|gb|EGI90001.1| DNA repair protein radC [Shigella boydii 5216-82] Length = 188 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 92 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 151 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 152 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 188 >gi|323944091|gb|EGB40171.1| DNA repair protein RadC [Escherichia coli H120] Length = 222 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|15804179|ref|NP_290218.1| DNA repair protein RadC [Escherichia coli O157:H7 EDL933] gi|15833767|ref|NP_312540.1| DNA repair protein RadC [Escherichia coli O157:H7 str. Sakai] gi|26250284|ref|NP_756324.1| DNA repair protein RadC [Escherichia coli CFT073] gi|91213155|ref|YP_543141.1| DNA repair protein RadC [Escherichia coli UTI89] gi|117625910|ref|YP_859233.1| DNA repair protein RadC [Escherichia coli APEC O1] gi|161485825|ref|NP_709417.3| DNA repair protein RadC [Shigella flexneri 2a str. 301] gi|161486390|ref|NP_839257.2| DNA repair protein RadC [Shigella flexneri 2a str. 2457T] gi|227883806|ref|ZP_04001611.1| DNA repair protein RadC [Escherichia coli 83972] gi|237703409|ref|ZP_04533890.1| DNA repair protein radC [Escherichia sp. 3_2_53FAA] gi|254038838|ref|ZP_04872890.1| DNA repair protein radC [Escherichia sp. 1_1_43] gi|291285009|ref|YP_003501827.1| DNA repair protein [Escherichia coli O55:H7 str. CB9615] gi|300898572|ref|ZP_07116903.1| DNA repair protein RadC [Escherichia coli MS 198-1] gi|300907679|ref|ZP_07125307.1| DNA repair protein RadC [Escherichia coli MS 84-1] gi|300939237|ref|ZP_07153917.1| DNA repair protein RadC [Escherichia coli MS 21-1] gi|300983482|ref|ZP_07176629.1| DNA repair protein RadC [Escherichia coli MS 200-1] gi|300984962|ref|ZP_07177214.1| DNA repair protein RadC [Escherichia coli MS 45-1] gi|301018967|ref|ZP_07183190.1| DNA repair protein RadC [Escherichia coli MS 69-1] gi|301047427|ref|ZP_07194507.1| DNA repair protein RadC [Escherichia coli MS 185-1] gi|301303871|ref|ZP_07209990.1| DNA repair protein RadC [Escherichia coli MS 124-1] gi|309797621|ref|ZP_07692009.1| DNA repair protein RadC [Escherichia coli MS 145-7] gi|312972077|ref|ZP_07786251.1| DNA repair protein radC [Escherichia coli 1827-70] gi|331649453|ref|ZP_08350539.1| DNA repair protein RadC [Escherichia coli M605] gi|12518394|gb|AAG58782.1|AE005591_6 DNA repair protein [Escherichia coli O157:H7 str. EDL933] gi|26110714|gb|AAN82898.1|AE016769_13 DNA repair protein radC [Escherichia coli CFT073] gi|13363988|dbj|BAB37936.1| DNA repair protein [Escherichia coli O157:H7 str. Sakai] gi|91074729|gb|ABE09610.1| DNA repair protein [Escherichia coli UTI89] gi|115515034|gb|ABJ03109.1| DNA repair protein RadC [Escherichia coli APEC O1] gi|209754638|gb|ACI75631.1| DNA repair protein [Escherichia coli] gi|209754640|gb|ACI75632.1| DNA repair protein [Escherichia coli] gi|209754642|gb|ACI75633.1| DNA repair protein [Escherichia coli] gi|209754644|gb|ACI75634.1| DNA repair protein [Escherichia coli] gi|209754646|gb|ACI75635.1| DNA repair protein [Escherichia coli] gi|226838803|gb|EEH70830.1| DNA repair protein radC [Escherichia sp. 1_1_43] gi|226902673|gb|EEH88932.1| DNA repair protein radC [Escherichia sp. 3_2_53FAA] gi|227839084|gb|EEJ49550.1| DNA repair protein RadC [Escherichia coli 83972] gi|281603001|gb|ADA75985.1| DNA repair protein [Shigella flexneri 2002017] gi|290764882|gb|ADD58843.1| DNA repair protein [Escherichia coli O55:H7 str. CB9615] gi|300300701|gb|EFJ57086.1| DNA repair protein RadC [Escherichia coli MS 185-1] gi|300306946|gb|EFJ61466.1| DNA repair protein RadC [Escherichia coli MS 200-1] gi|300357758|gb|EFJ73628.1| DNA repair protein RadC [Escherichia coli MS 198-1] gi|300399461|gb|EFJ82999.1| DNA repair protein RadC [Escherichia coli MS 69-1] gi|300400615|gb|EFJ84153.1| DNA repair protein RadC [Escherichia coli MS 84-1] gi|300408242|gb|EFJ91780.1| DNA repair protein RadC [Escherichia coli MS 45-1] gi|300455879|gb|EFK19372.1| DNA repair protein RadC [Escherichia coli MS 21-1] gi|300840834|gb|EFK68594.1| DNA repair protein RadC [Escherichia coli MS 124-1] gi|308118808|gb|EFO56070.1| DNA repair protein RadC [Escherichia coli MS 145-7] gi|310334454|gb|EFQ00659.1| DNA repair protein radC [Escherichia coli 1827-70] gi|315254024|gb|EFU33992.1| DNA repair protein RadC [Escherichia coli MS 85-1] gi|315285375|gb|EFU44820.1| DNA repair protein RadC [Escherichia coli MS 110-3] gi|315292975|gb|EFU52327.1| DNA repair protein RadC [Escherichia coli MS 153-1] gi|323189454|gb|EFZ74735.1| DNA repair protein radC [Escherichia coli RN587/1] gi|324008143|gb|EGB77362.1| DNA repair protein RadC [Escherichia coli MS 57-2] gi|324012728|gb|EGB81947.1| DNA repair protein RadC [Escherichia coli MS 60-1] gi|325499444|gb|EGC97303.1| DNA repair protein RadC [Escherichia fergusonii ECD227] gi|331041951|gb|EGI14095.1| DNA repair protein RadC [Escherichia coli M605] Length = 224 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224 >gi|309784385|ref|ZP_07679024.1| DNA repair protein radC [Shigella dysenteriae 1617] gi|172046622|sp|Q329L9|YICR_SHIDS RecName: Full=UPF0758 protein yicR gi|308927892|gb|EFP73360.1| DNA repair protein radC [Shigella dysenteriae 1617] Length = 222 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRIFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|262191975|ref|ZP_06050141.1| DNA repair protein RadC [Vibrio cholerae CT 5369-93] gi|262032150|gb|EEY50722.1| DNA repair protein RadC [Vibrio cholerae CT 5369-93] gi|315178489|gb|ADT85403.1| DNA repair protein RadC-related protein [Vibrio furnissii NCTC 11218] Length = 157 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + +GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157 >gi|315645752|ref|ZP_07898876.1| DNA repair protein RadC [Paenibacillus vortex V453] gi|315279230|gb|EFU42540.1| DNA repair protein RadC [Paenibacillus vortex V453] Length = 229 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N +IA E S G+++ V+ RE+ + ++ S+ S++ HNHPSG+P PS DI Sbjct: 133 VFLNTKNHVIAQETLSMGSLNASIVHPREVFRAAIKCSSASLVCAHNHPSGDPTPSPEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T ++ + I V DH+IIG +FVS K ++ Sbjct: 193 SLTTRLVEAGQIVGIEVLDHLIIGDGSFVSLKERGLM 229 >gi|295688455|ref|YP_003592148.1| DNA repair protein RadC [Caulobacter segnis ATCC 21756] gi|295430358|gb|ADG09530.1| DNA repair protein RadC [Caulobacter segnis ATCC 21756] Length = 256 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEV +RGT+DH PVY RE+++R LELS+++II+VHNHPSG+P PS DI Sbjct: 160 LFLDKKNQLIADEVMNRGTVDHAPVYPREVMRRALELSSSNIIIVHNHPSGDPTPSRPDI 219 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ I+ L I VHDH+++G++ SFK L ++ Sbjct: 220 DMTKQIVEAGKALKIAVHDHLVVGREGVASFKALGLM 256 >gi|209549111|ref|YP_002281028.1| DNA repair protein RadC [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226736629|sp|B5ZMI0|Y1511_RHILW RecName: Full=UPF0758 protein Rleg2_1511 gi|209534867|gb|ACI54802.1| DNA repair protein RadC [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 275 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 67/97 (69%), Positives = 80/97 (82%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI Sbjct: 179 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAMILVHNHPSGDPTPSRADI 238 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ II L+I VHDH+IIGKD VS KGL++I Sbjct: 239 DMTKVIIEAAKALDITVHDHVIIGKDGHVSLKGLKLI 275 >gi|25014079|sp|Q9PGZ8|Y148_XYLFA RecName: Full=UPF0758 protein XF_0148 Length = 224 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + I+ E GTI+ V+ RE+V+R L L+A ++I+ HNHPSGN PS AD Sbjct: 128 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ +++ + DH +IG A VSF + Sbjct: 188 MITQRLKNALDLIDVRLVDHFVIGDGAPVSFAEHGWL 224 >gi|120597983|ref|YP_962557.1| DNA repair protein RadC [Shewanella sp. W3-18-1] gi|120558076|gb|ABM24003.1| DNA repair protein RadC [Shewanella sp. W3-18-1] Length = 165 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E +GT+D VY RE+ +R LEL+ ++ILVHNHPSG+P PS++D Sbjct: 69 LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNVAAVILVHNHPSGDPEPSESDK 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L+ ++I DH+++ + VS + Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSLAERGYL 165 >gi|302384219|ref|YP_003820042.1| DNA repair protein RadC [Brevundimonas subvibrioides ATCC 15264] gi|302194847|gb|ADL02419.1| DNA repair protein RadC [Brevundimonas subvibrioides ATCC 15264] Length = 249 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LI DEVQ+RGT+DH PVY RE+V+R LE++A ++ILVHNHPSG+P PS ADI Sbjct: 153 LYLDNRNQLILDEVQNRGTVDHAPVYPREVVRRGLEVNAKAMILVHNHPSGDPTPSRADI 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MTQ II PLN+ VHDH+I+G++ SFK L ++ Sbjct: 213 DMTQQIIRAARPLNVEVHDHLIVGREGVTSFKQLGLM 249 >gi|299531454|ref|ZP_07044862.1| DNA repair protein RadC [Comamonas testosteroni S44] gi|298720617|gb|EFI61566.1| DNA repair protein RadC [Comamonas testosteroni S44] Length = 230 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N L+A E RGT+ VY RE+V R L A ++IL HNHPSG+ PS AD Sbjct: 134 LFLDSQNRLLALEEMFRGTLTQTSVYPREVVLRALHHQAGAVILAHNHPSGSVQPSSADR 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T + L +++ V DHII+G A S ++ Sbjct: 194 SLTNTLKAALALIDVRVLDHIIVGPGAACSMAEEGLL 230 >gi|293413072|ref|ZP_06655740.1| radC [Escherichia coli B354] gi|291468719|gb|EFF11212.1| radC [Escherichia coli B354] Length = 224 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224 >gi|146309768|ref|YP_001174842.1| DNA repair protein RadC [Enterobacter sp. 638] gi|166918667|sp|A4W511|Y101_ENT38 RecName: Full=UPF0758 protein Ent638_0101 gi|145316644|gb|ABP58791.1| DNA replication and repair protein RadC [Enterobacter sp. 638] Length = 221 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT+ HV V+ REIV+ ++++A ++IL HNHPSG PS AD Sbjct: 125 IFLDNQHRVVKHSRMFSGTLRHVEVHPREIVREAIKVNAAAVILAHNHPSGCAEPSKADK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ II ++I V DH IIG+ +VSF I Sbjct: 185 DITERIIKCCQFMDIHVLDHFIIGRGEYVSFAEQGWI 221 >gi|157163119|ref|YP_001460437.1| DNA repair protein RadC [Escherichia coli HS] gi|166918666|sp|A8A6A0|YICR_ECOHS RecName: Full=UPF0758 protein yicR gi|157068799|gb|ABV08054.1| DNA repair protein RadC [Escherichia coli HS] Length = 222 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|50119543|ref|YP_048710.1| putative DNA repair protein [Pectobacterium atrosepticum SCRI1043] gi|49610069|emb|CAG73509.1| putative DNA repair protein [Pectobacterium atrosepticum SCRI1043] Length = 137 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N LIA E GTI+ V V+ E+V+R + L+A ++I HNHPSGN PS+AD Sbjct: 41 MFLNNQNRLIACEFLFAGTINSVEVHPHEVVRRAVLLNAAAVIFAHNHPSGNAEPSNADR 100 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+ + + V DHII+G VSF + Sbjct: 101 QITEKLTNALSLIEVRVLDHIIVGHGEIVSFAERGWL 137 >gi|259417142|ref|ZP_05741061.1| DNA repair protein RadC [Silicibacter sp. TrichCH4B] gi|259346048|gb|EEW57862.1| DNA repair protein RadC [Silicibacter sp. TrichCH4B] Length = 271 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 53/97 (54%), Positives = 74/97 (76%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N+LIADE Q RGT+DHVPVY RE+ +R LEL+++++ILVHNHPSG+P PS ADI Sbjct: 175 LYLDRKNVLIADEEQGRGTVDHVPVYPREVAKRALELNSSALILVHNHPSGDPTPSQADI 234 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + L+ L I +HDH+IIG +SF+ ++ Sbjct: 235 AMTRKVEAALDALGITLHDHLIIGASDELSFRSEGLL 271 >gi|193063880|ref|ZP_03044967.1| DNA repair protein RadC [Escherichia coli E22] gi|218697359|ref|YP_002405026.1| DNA repair protein RadC [Escherichia coli 55989] gi|256021358|ref|ZP_05435223.1| DNA repair protein RadC [Shigella sp. D9] gi|256025632|ref|ZP_05439497.1| DNA repair protein RadC [Escherichia sp. 4_1_40B] gi|260846597|ref|YP_003224375.1| protein associated with replication fork [Escherichia coli O103:H2 str. 12009] gi|307140336|ref|ZP_07499692.1| DNA repair protein RadC [Escherichia coli H736] gi|172046624|sp|Q31UY8|YICR_SHIBS RecName: Full=UPF0758 protein yicR gi|254789650|sp|B7L757|YICR_ECO55 RecName: Full=UPF0758 protein yicR gi|192930595|gb|EDV83202.1| DNA repair protein RadC [Escherichia coli E22] gi|218354091|emb|CAV00643.1| protein associated with replication fork, putative DNA repair protein [Escherichia coli 55989] gi|257761744|dbj|BAI33241.1| protein associated with replication fork [Escherichia coli O103:H2 str. 12009] gi|320176303|gb|EFW51363.1| DNA repair protein RadC [Shigella dysenteriae CDC 74-1112] gi|320186822|gb|EFW61542.1| DNA repair protein RadC [Shigella flexneri CDC 796-83] gi|323182666|gb|EFZ68069.1| DNA repair protein radC [Escherichia coli 1357] gi|323934817|gb|EGB31199.1| DNA repair protein RadC [Escherichia coli E1520] gi|324116023|gb|EGC09949.1| DNA repair protein RadC [Escherichia coli E1167] Length = 222 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|323179392|gb|EFZ64959.1| DNA repair protein radC [Escherichia coli 1180] Length = 224 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224 >gi|300919795|ref|ZP_07136270.1| DNA repair protein RadC [Escherichia coli MS 115-1] gi|300413148|gb|EFJ96458.1| DNA repair protein RadC [Escherichia coli MS 115-1] Length = 224 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224 >gi|161505736|ref|YP_001572848.1| DNA repair protein RadC [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189029401|sp|A9MKN7|YICR_SALAR RecName: Full=UPF0758 protein yicR gi|160867083|gb|ABX23706.1| hypothetical protein SARI_03912 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 221 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT+ HV V+ REIV+ ++L+A+++IL HNHPSG PS AD Sbjct: 125 IFLDAQHRVLQHSRLFSGTLSHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T +I ++I V DH+IIG+ +VSF I Sbjct: 185 HITDRVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >gi|3024521|sp|P72255|Y2304_RHOCA RecName: Full=UPF0758 protein gi|1658114|gb|AAB18255.1| RadC [Rhodobacter capsulatus] Length = 214 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 74/97 (76%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL A+++ILVHNHPSG+P PS ADI Sbjct: 118 LFLDRKNLLIADEEQARGTVDHVPVYPREVVKRALELDASALILVHNHPSGDPTPSQADI 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I L +++HDH++IGK +SF+ ++ Sbjct: 178 AMTDQIRHAAEALGLVLHDHLVIGKGRELSFRAEGLL 214 >gi|260429142|ref|ZP_05783119.1| DNA repair protein RadC [Citreicella sp. SE45] gi|260419765|gb|EEX13018.1| DNA repair protein RadC [Citreicella sp. SE45] Length = 254 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 56/97 (57%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+LIADE+Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI Sbjct: 158 LFLDRKNVLIADELQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSQADI 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT I + L I +HDH++IGK +SF+ ++ Sbjct: 218 DMTAQIQVAADALGITLHDHLVIGKSRELSFRSAGLL 254 >gi|255292016|dbj|BAH90499.1| DNA repair protein RadC [uncultured bacterium] gi|255292877|dbj|BAH89977.1| DNA repair protein RadC [uncultured bacterium] gi|255292945|dbj|BAH90043.1| DNA repair protein RadC [uncultured bacterium] gi|255293215|dbj|BAH90305.1| DNA repair protein RadC [uncultured bacterium] Length = 169 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LF+D + LI RGTID VY RE+V+ L L+A ++I+ HNHPSGNP PS AD Sbjct: 73 LFMDTQHRLIEYAEMFRGTIDSASVYPRELVKEALRLNAAAVIISHNHPSGNPEPSQADK 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ DHII+ SF +I Sbjct: 133 VLTRQLKEVLALVDVRTLDHIIVAGTTTTSFAERGLI 169 >gi|193070384|ref|ZP_03051326.1| DNA repair protein RadC [Escherichia coli E110019] gi|192956323|gb|EDV86784.1| DNA repair protein RadC [Escherichia coli E110019] Length = 222 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|315297033|gb|EFU56313.1| DNA repair protein RadC [Escherichia coli MS 16-3] Length = 224 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224 >gi|282600469|ref|ZP_05974415.2| DNA repair protein RadC [Providencia rustigianii DSM 4541] gi|282565170|gb|EFB70705.1| DNA repair protein RadC [Providencia rustigianii DSM 4541] Length = 234 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N +I E +GT++ V V+ REI++ ++++A+SIIL HNHPSGNP PS AD Sbjct: 138 IFLNNQNQIICHEEMFKGTVNRVEVHPREILRFAMKMNASSIILAHNHPSGNPEPSIADK 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + + + I + DH ++G VSF + Sbjct: 198 QVTERIHSACSIMGIKLLDHFVVGHKHCVSFVERGWL 234 >gi|157155076|ref|YP_001465118.1| DNA repair protein RadC [Escherichia coli E24377A] gi|168748714|ref|ZP_02773736.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4113] gi|168753462|ref|ZP_02778469.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4401] gi|168759735|ref|ZP_02784742.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4501] gi|168766058|ref|ZP_02791065.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4486] gi|168772396|ref|ZP_02797403.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4196] gi|168779793|ref|ZP_02804800.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4076] gi|168785514|ref|ZP_02810521.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC869] gi|168798583|ref|ZP_02823590.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC508] gi|170682096|ref|YP_001745938.1| DNA repair protein RadC [Escherichia coli SMS-3-5] gi|191167799|ref|ZP_03029605.1| DNA repair protein RadC [Escherichia coli B7A] gi|191170534|ref|ZP_03032087.1| DNA repair protein RadC [Escherichia coli F11] gi|194435617|ref|ZP_03067720.1| DNA repair protein RadC [Escherichia coli 101-1] gi|195936199|ref|ZP_03081581.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4024] gi|208807607|ref|ZP_03249944.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4206] gi|208814077|ref|ZP_03255406.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4045] gi|208819041|ref|ZP_03259361.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4042] gi|209399382|ref|YP_002273116.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4115] gi|215488917|ref|YP_002331348.1| DNA repair protein RadC [Escherichia coli O127:H6 str. E2348/69] gi|217325841|ref|ZP_03441925.1| DNA repair protein RadC [Escherichia coli O157:H7 str. TW14588] gi|218551166|ref|YP_002384957.1| DNA repair protein RadC [Escherichia fergusonii ATCC 35469] gi|218556201|ref|YP_002389114.1| DNA repair protein RadC [Escherichia coli IAI1] gi|218560710|ref|YP_002393623.1| DNA repair protein RadC [Escherichia coli S88] gi|218702404|ref|YP_002410033.1| DNA repair protein RadC [Escherichia coli IAI39] gi|218707272|ref|YP_002414791.1| DNA repair protein RadC [Escherichia coli UMN026] gi|254795593|ref|YP_003080430.1| DNA repair protein RadC [Escherichia coli O157:H7 str. TW14359] gi|260857967|ref|YP_003231858.1| protein associated with replication fork [Escherichia coli O26:H11 str. 11368] gi|261224179|ref|ZP_05938460.1| DNA repair protein RadC [Escherichia coli O157:H7 str. FRIK2000] gi|261254790|ref|ZP_05947323.1| DNA repair protein RadC [Escherichia coli O157:H7 str. FRIK966] gi|293407261|ref|ZP_06651185.1| radC [Escherichia coli FVEC1412] gi|298383007|ref|ZP_06992602.1| DNA repair protein RadC [Escherichia coli FVEC1302] gi|306816014|ref|ZP_07450152.1| DNA repair protein RadC [Escherichia coli NC101] gi|307314277|ref|ZP_07593885.1| DNA repair protein RadC [Escherichia coli W] gi|312968021|ref|ZP_07782232.1| DNA repair protein radC [Escherichia coli 2362-75] gi|331659958|ref|ZP_08360896.1| DNA repair protein RadC [Escherichia coli TA206] gi|331665263|ref|ZP_08366164.1| DNA repair protein RadC [Escherichia coli TA143] gi|54039001|sp|P65958|YICR_ECO57 RecName: Full=UPF0758 protein yicR gi|54039002|sp|P65959|YICR_SHIFL RecName: Full=UPF0758 protein yicR gi|54041783|sp|P65957|YICR_ECOL6 RecName: Full=UPF0758 protein yicR gi|166918665|sp|A7ZTI9|YICR_ECO24 RecName: Full=UPF0758 protein yicR gi|171704420|sp|A1AHG9|YICR_ECOK1 RecName: Full=UPF0758 protein yicR gi|172045688|sp|Q0SYG5|YICR_SHIF8 RecName: Full=UPF0758 protein yicR gi|172045855|sp|Q0TBH1|YICR_ECOL5 RecName: Full=UPF0758 protein yicR gi|172046244|sp|Q1R4V4|YICR_ECOUT RecName: Full=UPF0758 protein yicR gi|226736620|sp|B7MFJ9|YICR_ECO45 RecName: Full=UPF0758 protein yicR gi|226736621|sp|B7NPZ9|YICR_ECO7I RecName: Full=UPF0758 protein yicR gi|226736622|sp|B7M4C3|YICR_ECO8A RecName: Full=UPF0758 protein yicR gi|226736623|sp|B7NEU2|YICR_ECOLU RecName: Full=UPF0758 protein yicR gi|226736624|sp|B1LK75|YICR_ECOSM RecName: Full=UPF0758 protein yicR gi|226736625|sp|B7LVJ9|YICR_ESCF3 RecName: Full=UPF0758 protein yicR gi|238054488|sp|B5YWD6|YICR_ECO5E RecName: Full=UPF0758 protein yicR gi|254789649|sp|B7ULJ3|YICR_ECO27 RecName: Full=UPF0758 protein yicR gi|30043347|gb|AAP19068.1| DNA repair protein [Shigella flexneri 2a str. 2457T] gi|56383942|gb|AAN45124.2| DNA repair protein [Shigella flexneri 2a str. 301] gi|157077106|gb|ABV16814.1| DNA repair protein RadC [Escherichia coli E24377A] gi|170519814|gb|ACB17992.1| DNA repair protein RadC [Escherichia coli SMS-3-5] gi|187771513|gb|EDU35357.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4196] gi|188016882|gb|EDU55004.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4113] gi|189002388|gb|EDU71374.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4076] gi|189359101|gb|EDU77520.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4401] gi|189364789|gb|EDU83208.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4486] gi|189369603|gb|EDU88019.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4501] gi|189374591|gb|EDU93007.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC869] gi|189378726|gb|EDU97142.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC508] gi|190902142|gb|EDV61885.1| DNA repair protein RadC [Escherichia coli B7A] gi|190909342|gb|EDV68928.1| DNA repair protein RadC [Escherichia coli F11] gi|194425160|gb|EDX41144.1| DNA repair protein RadC [Escherichia coli 101-1] gi|208727408|gb|EDZ77009.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4206] gi|208735354|gb|EDZ84041.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4045] gi|208739164|gb|EDZ86846.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4042] gi|209160782|gb|ACI38215.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4115] gi|215266989|emb|CAS11434.1| protein associated with replication fork, possible DNA repair protein [Escherichia coli O127:H6 str. E2348/69] gi|217322062|gb|EEC30486.1| DNA repair protein RadC [Escherichia coli O157:H7 str. TW14588] gi|218358707|emb|CAQ91363.1| protein associated with replication fork, putative DNA repair protein [Escherichia fergusonii ATCC 35469] gi|218362969|emb|CAR00606.1| protein associated with replication fork, putative DNA repair protein [Escherichia coli IAI1] gi|218367479|emb|CAR05261.1| protein associated with replication fork, putative DNA repair protein [Escherichia coli S88] gi|218372390|emb|CAR20264.1| protein associated with replication fork, putative DNA repair protein [Escherichia coli IAI39] gi|218434369|emb|CAR15294.1| protein associated with replication fork, putative DNA repair protein [Escherichia coli UMN026] gi|254594993|gb|ACT74354.1| protein associated with replication fork, possible DNA repair protein [Escherichia coli O157:H7 str. TW14359] gi|257756616|dbj|BAI28118.1| protein associated with replication fork [Escherichia coli O26:H11 str. 11368] gi|284923671|emb|CBG36768.1| DNA repair protein [Escherichia coli 042] gi|291426072|gb|EFE99106.1| radC [Escherichia coli FVEC1412] gi|294489934|gb|ADE88690.1| DNA repair protein RadC [Escherichia coli IHE3034] gi|298276843|gb|EFI18361.1| DNA repair protein RadC [Escherichia coli FVEC1302] gi|305850410|gb|EFM50867.1| DNA repair protein RadC [Escherichia coli NC101] gi|306906100|gb|EFN36619.1| DNA repair protein RadC [Escherichia coli W] gi|307628711|gb|ADN73015.1| DNA repair protein RadC [Escherichia coli UM146] gi|309704040|emb|CBJ03386.1| DNA repair protein [Escherichia coli ETEC H10407] gi|312287280|gb|EFR15189.1| DNA repair protein radC [Escherichia coli 2362-75] gi|313647488|gb|EFS11938.1| DNA repair protein radC [Shigella flexneri 2a str. 2457T] gi|315062926|gb|ADT77253.1| protein associated with replication fork, possible DNA repair protein [Escherichia coli W] gi|320191311|gb|EFW65961.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC1212] gi|320193855|gb|EFW68488.1| DNA repair protein RadC [Escherichia coli WV_060327] gi|320201337|gb|EFW75918.1| DNA repair protein RadC [Escherichia coli EC4100B] gi|320639545|gb|EFX09153.1| hypothetical protein ECO5101_20865 [Escherichia coli O157:H7 str. G5101] gi|320644984|gb|EFX14014.1| hypothetical protein ECO9389_10227 [Escherichia coli O157:H- str. 493-89] gi|320650251|gb|EFX18740.1| hypothetical protein ECO2687_12698 [Escherichia coli O157:H- str. H 2687] gi|320655603|gb|EFX23531.1| hypothetical protein ECO7815_06054 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661337|gb|EFX28761.1| hypothetical protein ECO5905_11396 [Escherichia coli O55:H7 str. USDA 5905] gi|323155289|gb|EFZ41472.1| DNA repair protein radC [Escherichia coli EPECa14] gi|323376481|gb|ADX48749.1| DNA repair protein RadC [Escherichia coli KO11] gi|323939603|gb|EGB35809.1| DNA repair protein RadC [Escherichia coli E482] gi|323949877|gb|EGB45761.1| DNA repair protein RadC [Escherichia coli H252] gi|323954822|gb|EGB50602.1| DNA repair protein RadC [Escherichia coli H263] gi|323959886|gb|EGB55534.1| DNA repair protein RadC [Escherichia coli H489] gi|323965904|gb|EGB61352.1| DNA repair protein RadC [Escherichia coli M863] gi|323971280|gb|EGB66525.1| DNA repair protein RadC [Escherichia coli TA007] gi|323975142|gb|EGB70247.1| DNA repair protein RadC [Escherichia coli TW10509] gi|324111532|gb|EGC05513.1| DNA repair protein RadC [Escherichia fergusonii B253] gi|326337363|gb|EGD61198.1| DNA repair protein RadC [Escherichia coli O157:H7 str. 1044] gi|326339888|gb|EGD63695.1| DNA repair protein RadC [Escherichia coli O157:H7 str. 1125] gi|327250764|gb|EGE62466.1| DNA repair protein radC [Escherichia coli STEC_7v] gi|331053173|gb|EGI25206.1| DNA repair protein RadC [Escherichia coli TA206] gi|331057773|gb|EGI29759.1| DNA repair protein RadC [Escherichia coli TA143] Length = 222 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|301646528|ref|ZP_07246401.1| DNA repair protein RadC domain protein [Escherichia coli MS 146-1] gi|301075233|gb|EFK90039.1| DNA repair protein RadC domain protein [Escherichia coli MS 146-1] Length = 116 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 20 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 79 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 80 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEYGLL 116 >gi|268325239|emb|CBH38827.1| probable DNA repair protein radC homolog [uncultured archaeon] Length = 329 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N I DE GT++ VY REIV+ + +A S+I VHNHPSG+P PS +D Sbjct: 214 IFLDSANQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDR 273 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++++ N + I V DHIIIG + + SF ++ Sbjct: 274 AITEDLVYACNLVQITVLDHIIIGDNVYFSFADEGLL 310 >gi|148260493|ref|YP_001234620.1| DNA repair protein RadC [Acidiphilium cryptum JF-5] gi|146402174|gb|ABQ30701.1| DNA repair protein RadC [Acidiphilium cryptum JF-5] Length = 255 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 53/97 (54%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADEVQS GT++H P+Y RE+++R LE AT+IILVHNHPSG+P PS D+ Sbjct: 159 LFLDQRNRLIADEVQSVGTVNHTPLYPRELIRRALEHHATAIILVHNHPSGDPTPSPEDV 218 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I + L+I++HDH+I+G +VS K L ++ Sbjct: 219 AMTREIKQAASTLSIVLHDHVIVGNGKWVSLKRLGLL 255 >gi|260580042|ref|ZP_05847872.1| DNA repair protein [Haemophilus influenzae RdAW] gi|329122974|ref|ZP_08251545.1| DNA repair protein RadC [Haemophilus aegyptius ATCC 11116] gi|260093326|gb|EEW77259.1| DNA repair protein [Haemophilus influenzae RdAW] gi|327471905|gb|EGF17345.1| DNA repair protein RadC [Haemophilus aegyptius ATCC 11116] Length = 234 Score = 132 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 138 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 234 >gi|301169677|emb|CBW29278.1| protein associated with replication fork, possible DNA repair protein [Haemophilus influenzae 10810] Length = 234 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 138 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 234 >gi|260870368|ref|YP_003236770.1| protein associated with replication fork [Escherichia coli O111:H- str. 11128] gi|257766724|dbj|BAI38219.1| protein associated with replication fork [Escherichia coli O111:H- str. 11128] Length = 222 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|188495548|ref|ZP_03002818.1| DNA repair protein RadC [Escherichia coli 53638] gi|188490747|gb|EDU65850.1| DNA repair protein RadC [Escherichia coli 53638] Length = 222 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|237806959|ref|YP_002891399.1| DNA repair protein RadC [Tolumonas auensis DSM 9187] gi|259551912|sp|C4L814|Y183_TOLAT RecName: Full=UPF0758 protein Tola_0183 gi|237499220|gb|ACQ91813.1| DNA repair protein RadC [Tolumonas auensis DSM 9187] Length = 224 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + ++ GTID VY REIVQ L+ +A ++IL HNHPSG PS AD Sbjct: 128 LLLDNQHRVLRFCELFFGTIDAASVYPREIVQTVLKHNAAAVILCHNHPSGVAEPSHADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ I L +++ V DH +IG VSF + Sbjct: 188 HITERICDALRLIDVRVLDHFVIGDGDPVSFAERGWL 224 >gi|218691922|ref|YP_002400134.1| DNA repair protein RadC [Escherichia coli ED1a] gi|254789651|sp|B7N279|YICR_ECO81 RecName: Full=UPF0758 protein yicR gi|218429486|emb|CAR10450.2| protein associated with replication fork, putative DNA repair protein [Escherichia coli ED1a] gi|222035346|emb|CAP78091.1| DNA repair protein radC [Escherichia coli LF82] gi|281180684|dbj|BAI57014.1| DNA repair protein [Escherichia coli SE15] gi|312948199|gb|ADR29026.1| DNA repair protein RadC [Escherichia coli O83:H1 str. NRG 857C] Length = 222 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|308271126|emb|CBX27735.1| DNA repair protein radC homolog [uncultured Desulfobacterium sp.] Length = 243 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N +I E +G++ VY RE+ + L+ A ++I HNHPSG+P PS DI Sbjct: 133 IFLDAKNKVIRTETLFKGSLTSSSVYPREVAKAALDYHAAALIFAHNHPSGDPAPSPEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I + +IVH+HIIIG + + SF I Sbjct: 193 AVTRQLIFACKVMGVIVHEHIIIGDNKYFSFADHGYI 229 >gi|110643879|ref|YP_671609.1| DNA repair protein RadC [Escherichia coli 536] gi|170018132|ref|YP_001723086.1| DNA repair protein RadC [Escherichia coli ATCC 8739] gi|110345471|gb|ABG71708.1| DNA repair protein RadC [Escherichia coli 536] gi|169753060|gb|ACA75759.1| DNA repair protein RadC [Escherichia coli ATCC 8739] gi|307555737|gb|ADN48512.1| DNA repair protein [Escherichia coli ABU 83972] Length = 214 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 118 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 178 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 214 >gi|257869998|ref|ZP_05649651.1| DNA repair protein RadC [Enterococcus gallinarum EG2] gi|257804162|gb|EEV32984.1| DNA repair protein RadC [Enterococcus gallinarum EG2] Length = 226 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ + REI + A +I VHNHPSG+P PS ADI Sbjct: 128 LYLNTKNEIIQKKTLFIGSLNQSIAHPREIYHGAVRCCAARVICVHNHPSGSPQPSQADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ ++ + I + DH+IIG ++++S + + Sbjct: 188 TFTKRLMKCGELMGIDLLDHLIIGNNSYISLREEGL 223 >gi|325292997|ref|YP_004278861.1| DNA repair protein RadC [Agrobacterium sp. H13-3] gi|325060850|gb|ADY64541.1| DNA repair protein RadC [Agrobacterium sp. H13-3] Length = 281 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 68/97 (70%), Positives = 80/97 (82%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N+LIADEVQ +GT+DH PVY RE+V+R LELS+T++IL+HNHPSG+P PS ADI Sbjct: 185 LFLDKRNVLIADEVQGQGTVDHTPVYPREVVRRALELSSTALILIHNHPSGDPTPSRADI 244 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ II T PL I VHDHIIIGKD SFKGLR+I Sbjct: 245 EMTKTIIDTAKPLGIAVHDHIIIGKDGHASFKGLRLI 281 >gi|330447140|ref|ZP_08310790.1| DNA repair RadC family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491331|dbj|GAA05287.1| DNA repair RadC family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 224 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E GTID VY RE+V+R LEL+A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVINGETLFEGTIDCASVYPREVVKRSLELNAAALILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I +L ++I V DH +IG VSF + Sbjct: 188 RITRKISDSLALVDIRVLDHFVIGDGEIVSFAERGWL 224 >gi|319644748|ref|ZP_07998981.1| RadC protein [Bacillus sp. BT1B_CT2] gi|317392557|gb|EFV73351.1| RadC protein [Bacillus sp. BT1B_CT2] Length = 97 Score = 132 bits (333), Expect = 1e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I G+++ V+ RE+ + L+ SA S I VHNHPSG+P PS DI Sbjct: 1 MYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEALKRSAASFICVHNHPSGDPAPSREDI 60 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + L I + DHIIIG FVS K + Sbjct: 61 EVTQRLHESGQLLGIELLDHIIIGDQKFVSLKEKGYL 97 >gi|322515256|ref|ZP_08068254.1| DNA repair protein RadC [Actinobacillus ureae ATCC 25976] gi|322118761|gb|EFX90967.1| DNA repair protein RadC [Actinobacillus ureae ATCC 25976] Length = 224 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 38/94 (40%), Positives = 57/94 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N LI E GTI+ VY REI++ L+ +A +II+ HNHPSG+ PS++D Sbjct: 124 MFLDNQNRLIKKEKMFYGTINQATVYPREIIKEALKCNAAAIIVAHNHPSGHCTPSESDR 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ I + + I DHI++GK + SF+ Sbjct: 184 ILTKKIEMACDLVEIRFVDHIVVGKGDYFSFEEE 217 >gi|259906759|ref|YP_002647115.1| DNA repair protein RadC [Erwinia pyrifoliae Ep1/96] gi|224962381|emb|CAX53836.1| DNA repair protein RadC [Erwinia pyrifoliae Ep1/96] gi|283476545|emb|CAY72373.1| Glutaredoxin 3 [Erwinia pyrifoliae DSM 12163] Length = 223 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F D + +I GT++ V V+ REIV+ L+ +A ++IL HNHPSG PS AD Sbjct: 127 IFFDNQHRVIHTSEMFSGTLNSVEVHPREIVREALKRNAAALILAHNHPSGLAEPSRADR 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ I+ + +NI V DH++IG+ +VSF + Sbjct: 187 DITQQIVHACSLMNIRVLDHMVIGRGEYVSFAERGWM 223 >gi|324019747|gb|EGB88966.1| DNA repair protein RadC [Escherichia coli MS 117-3] Length = 215 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 119 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 178 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 179 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 215 >gi|331685301|ref|ZP_08385887.1| DNA repair protein RadC [Escherichia coli H299] gi|331077672|gb|EGI48884.1| DNA repair protein RadC [Escherichia coli H299] Length = 222 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|253995755|ref|YP_003047819.1| DNA repair protein RadC [Methylotenera mobilis JLW8] gi|253982434|gb|ACT47292.1| DNA repair protein RadC [Methylotenera mobilis JLW8] Length = 224 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N L A E GT+ VY RE+V+R + +A S+IL HNHPSG S AD Sbjct: 128 LFLDAQNRLNAAEELFSGTLTQTSVYPREVVKRAMHHNAASVILAHNHPSGVAQQSAADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH I+ + +SF ++ Sbjct: 188 LLTQQLKQALALVDVRVLDHFIVAGNQTLSFAERGLL 224 >gi|145301064|ref|YP_001143905.1| DNA repair protein RadC [Aeromonas salmonicida subsp. salmonicida A449] gi|142853836|gb|ABO92157.1| DNA repair protein RadC [Aeromonas salmonicida subsp. salmonicida A449] Length = 327 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I GT+D V+ REIVQ L+ +A ++IL HNHPSG PS AD Sbjct: 231 LLLDNQHRVIQFVELFYGTLDSASVWPREIVQIALKHNAAAVILAHNHPSGVAEPSRADR 290 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I+ L ++I V DH++IG VSF + Sbjct: 291 QITDRILAALALIDIRVLDHLVIGDGITVSFAERGWL 327 >gi|89067385|ref|ZP_01154898.1| DNA repair protein RadC [Oceanicola granulosus HTCC2516] gi|89046954|gb|EAR53008.1| DNA repair protein RadC [Oceanicola granulosus HTCC2516] Length = 255 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+L+ADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI Sbjct: 159 LFLDRKNVLVADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSQADI 218 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT I + L I++HDHI+IG+ +SF+ ++ Sbjct: 219 DMTAQIARAADALGILLHDHIVIGRSRELSFRAEGLL 255 >gi|325277161|ref|ZP_08142806.1| DNA repair protein RadC [Pseudomonas sp. TJI-51] gi|324097699|gb|EGB95900.1| DNA repair protein RadC [Pseudomonas sp. TJI-51] Length = 165 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +IA E RGT+D VY REIV+ LE +A +IILVHNHPSG+P PS AD Sbjct: 69 LMLDSRHRVIAFEEVFRGTLDGASVYPREIVKIALEHNAAAIILVHNHPSGDPEPSQADR 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + LN + + DH+++G++ VS + Sbjct: 129 NLTTKLQDALNLVGVRTLDHVVVGQEDCVSLAERGYL 165 >gi|300927932|ref|ZP_07143491.1| DNA repair protein RadC [Escherichia coli MS 187-1] gi|300464024|gb|EFK27517.1| DNA repair protein RadC [Escherichia coli MS 187-1] Length = 224 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGKYVSFAERGWI 224 >gi|300948028|ref|ZP_07162169.1| DNA repair protein RadC [Escherichia coli MS 116-1] gi|300954468|ref|ZP_07166918.1| DNA repair protein RadC [Escherichia coli MS 175-1] gi|300318547|gb|EFJ68331.1| DNA repair protein RadC [Escherichia coli MS 175-1] gi|300452423|gb|EFK16043.1| DNA repair protein RadC [Escherichia coli MS 116-1] Length = 224 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 128 IFLDSQHRVITHCRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224 >gi|293417099|ref|ZP_06659726.1| DNA repair protein RadC [Escherichia coli B185] gi|291431130|gb|EFF04123.1| DNA repair protein RadC [Escherichia coli B185] Length = 224 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224 >gi|126734464|ref|ZP_01750211.1| DNA repair protein RadC [Roseobacter sp. CCS2] gi|126717330|gb|EBA14194.1| DNA repair protein RadC [Roseobacter sp. CCS2] Length = 255 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 59/96 (61%), Positives = 74/96 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +IADE Q++GT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PSDADI Sbjct: 155 LFLDTKNTVIADEEQAKGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSDADI 214 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 MT+ I L IIVHDH+IIGK SF+ L + Sbjct: 215 QMTRQIDAAAKSLGIIVHDHLIIGKSNETSFRALGL 250 >gi|330505620|ref|YP_004382489.1| DNA repair protein RadC [Pseudomonas mendocina NK-01] gi|328919906|gb|AEB60737.1| DNA repair protein RadC [Pseudomonas mendocina NK-01] Length = 234 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A EV RG+ID VY R++V+R L +A ++IL HNHPSG PS AD Sbjct: 138 LFLDAKHRVLAFEVLFRGSIDSASVYPRQVVKRSLANNAAAVILTHNHPSGVSEPSQADR 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L + + V DH I+G +S L + Sbjct: 198 VLTQRLKDALALVEVRVLDHFIVGDGEPLSMAELGWM 234 >gi|21243016|ref|NP_642598.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306] gi|21108524|gb|AAM37134.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306] Length = 164 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +IA E + GTI+ V+ R +V+R +EL+A ++IL HNHPSG S AD Sbjct: 68 VFLDNKHRVIAFEALALGTINQAIVHPRVVVRRAMELNAAAVILAHNHPSGETQDSTADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L+ ++I V DH+I+GK SF ++ Sbjct: 128 MLTERLRSALDFVDIRVLDHVIVGKGTPYSFAQAGLL 164 >gi|326403686|ref|YP_004283768.1| DNA repair protein RadC [Acidiphilium multivorum AIU301] gi|325050548|dbj|BAJ80886.1| DNA repair protein RadC [Acidiphilium multivorum AIU301] Length = 255 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 53/97 (54%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADEVQS GT++H P+Y RE+++R LE AT+IILVHNHPSG+P PS D+ Sbjct: 159 LFLDQRNRLIADEVQSVGTVNHTPLYPRELIRRALEHHATAIILVHNHPSGDPTPSPEDV 218 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I + L+I++HDH+I+G +VS K L ++ Sbjct: 219 AMTREIKQAASTLSIVLHDHVIVGNGKWVSLKRLGLL 255 >gi|308070402|ref|YP_003872007.1| DNA repair protein radC [Paenibacillus polymyxa E681] gi|305859681|gb|ADM71469.1| DNA repair protein radC [Paenibacillus polymyxa E681] Length = 230 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +IA E S G+++ V+ RE+ + ++ S+ SII HNHPSG+P PS D+ Sbjct: 134 LFLNTKNHVIAQETLSMGSLNSAIVHPREVFRAAIKCSSASIICAHNHPSGDPKPSPEDV 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ N + I V DHI+IG FVS K +I Sbjct: 194 QLTRRLMEAGNIVGIDVLDHIVIGDGTFVSLKEQGLI 230 >gi|153208645|ref|ZP_01946897.1| DNA repair protein RadC [Coxiella burnetii 'MSU Goat Q177'] gi|154707167|ref|YP_001425121.1| DNA repair protein [Coxiella burnetii Dugway 5J108-111] gi|165919790|ref|ZP_02219533.1| DNA repair protein RadC [Coxiella burnetii RSA 334] gi|212218127|ref|YP_002304914.1| DNA repair protein [Coxiella burnetii CbuK_Q154] gi|189029394|sp|A9KGS6|Y1789_COXBN RecName: Full=UPF0758 protein CBUD_1789 gi|238054487|sp|B6J5S7|Y488_COXB1 RecName: Full=UPF0758 protein CbuK_0488 gi|120575831|gb|EAX32455.1| DNA repair protein RadC [Coxiella burnetii 'MSU Goat Q177'] gi|154356453|gb|ABS77915.1| DNA repair protein [Coxiella burnetii Dugway 5J108-111] gi|165916873|gb|EDR35477.1| DNA repair protein RadC [Coxiella burnetii RSA 334] gi|212012389|gb|ACJ19769.1| DNA repair protein [Coxiella burnetii CbuK_Q154] Length = 224 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E G+I+ V+ REI++R L ++ ++I+ HNHPSG P+PS AD Sbjct: 128 LFLDNRHRIIQFEKLFYGSINQASVHPREIIKRALYHNSAALIVAHNHPSGVPDPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T ++ L +++ + DHIIIG SF ++ Sbjct: 188 AATTHLKEALALIDVRLLDHIIIGDRNSFSFAESGLL 224 >gi|86136816|ref|ZP_01055394.1| DNA repair protein RadC [Roseobacter sp. MED193] gi|85826140|gb|EAQ46337.1| DNA repair protein RadC [Roseobacter sp. MED193] Length = 258 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 56/97 (57%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADE Q+RGT+DHVPVY RE+ +R L+L+A+++ILVHNHPSG+P PS +DI Sbjct: 162 LFLDRKNCLIADEEQARGTVDHVPVYPREVAKRALDLNASALILVHNHPSGDPTPSASDI 221 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT I L PL + +HDH+IIG DA +SF+ ++ Sbjct: 222 DMTGRINQALTPLGVTLHDHLIIGSDAELSFRSEGLL 258 >gi|310643582|ref|YP_003948340.1| DNA repair protein radc [Paenibacillus polymyxa SC2] gi|309248532|gb|ADO58099.1| DNA repair protein RadC [Paenibacillus polymyxa SC2] Length = 230 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +IA E S G+++ V+ RE+ + ++ S+ SII HNHPSG+P PS D+ Sbjct: 134 LFLNTKNHVIAQETLSMGSLNSAIVHPREVFRAAIKCSSASIICAHNHPSGDPKPSPEDV 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ N + I V DHI+IG FVS K +I Sbjct: 194 QLTRRLMEAGNIVGIDVLDHIVIGDGTFVSLKEQGLI 230 >gi|297581793|ref|ZP_06943714.1| DNA repair protein RadC family protein [Vibrio cholerae RC385] gi|297533887|gb|EFH72727.1| DNA repair protein RadC family protein [Vibrio cholerae RC385] Length = 157 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + +GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEINAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157 >gi|310765969|gb|ADP10919.1| DNA repair protein RadC [Erwinia sp. Ejp617] Length = 223 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F D + +I GT++ V V+ REIV+ L+ +A ++IL HNHPSG PS AD Sbjct: 127 IFFDNQHRVIHTSEMFSGTLNSVEVHPREIVREALKRNAAALILAHNHPSGLAEPSRADR 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ I+ + +NI V DH++IG+ +VSF + Sbjct: 187 DITQQIVHACSLMNIRVLDHMVIGRGEYVSFAERGWM 223 >gi|26248376|ref|NP_754416.1| putative radC-like protein yeeS [Escherichia coli CFT073] gi|26108780|gb|AAN80983.1|AE016762_236 Putative radC-like protein yeeS [Escherichia coli CFT073] Length = 148 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++ L +A +++L HNHPSG PS AD Sbjct: 52 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKCALYHNAAAVVLAHNHPSGEVTPSKADR 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 148 >gi|70733334|ref|YP_263109.1| DNA repair protein RadC [Pseudomonas fluorescens Pf-5] gi|123652038|sp|Q4K3S4|Y6051_PSEF5 RecName: Full=UPF0758 protein PFL_6051 gi|68347633|gb|AAY95239.1| DNA repair protein RadC [Pseudomonas fluorescens Pf-5] Length = 224 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ EV +G+ID VY R++++R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDTRHRVLTFEVLFQGSIDSTTVYPRQVIKRALAHNAAAVILCHNHPSGICEPSPADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+G+ +S I Sbjct: 188 VVTRRLQEALELIDVRVLDHFIVGEGDPLSMAEYGWI 224 >gi|301028397|ref|ZP_07191643.1| DNA repair protein RadC [Escherichia coli MS 196-1] gi|299878508|gb|EFI86719.1| DNA repair protein RadC [Escherichia coli MS 196-1] Length = 222 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHCRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|91774671|ref|YP_544427.1| DNA repair protein RadC [Methylobacillus flagellatus KT] gi|122985645|sp|Q1H4K1|Y315_METFK RecName: Full=UPF0758 protein Mfla_0315 gi|91708658|gb|ABE48586.1| DNA replication and repair protein RadC [Methylobacillus flagellatus KT] Length = 224 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E GT+ VY RE+V+ L +A ++I HNHPSG P PS AD Sbjct: 128 IFLDAQHRVLAVEELFSGTLTQTSVYPREVVKCALRHNAAAMIFAHNHPSGVPEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + LN ++I V DH ++ + VSF +I Sbjct: 188 ALTEALKAALNLIDIRVLDHFVVAGNQLVSFSERGLI 224 >gi|188993439|ref|YP_001905449.1| DNA repair protein RadC [Xanthomonas campestris pv. campestris str. B100] gi|167735199|emb|CAP53411.1| DNA repair protein radC homolog [Xanthomonas campestris pv. campestris] Length = 243 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + IA E GTID ++ RE+V+R L +A ++++ HNHPSGNP PS+AD Sbjct: 146 LFLDSRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSEADR 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L ++I + DH +IG VS + Sbjct: 206 AVTQRLLQALGLVDIRLLDHFVIGDGRPVSLAERGWV 242 >gi|226311419|ref|YP_002771313.1| DNA repair protein RadC [Brevibacillus brevis NBRC 100599] gi|226094367|dbj|BAH42809.1| probable DNA repair protein RadC [Brevibacillus brevis NBRC 100599] Length = 232 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I + G++D V+ RE+ + + S+ S+I +HNHPSG+P PS DI Sbjct: 136 LFLNTKNHVIGKQTIFVGSLDASIVHPREVFKEAIRRSSASVICLHNHPSGDPTPSREDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + I + DH+IIG+ +VS K + Sbjct: 196 AITHTLRDAGELVGISLLDHVIIGEGKYVSLKEQGYL 232 >gi|261418366|ref|YP_003252048.1| DNA repair protein RadC [Geobacillus sp. Y412MC61] gi|319767675|ref|YP_004133176.1| DNA repair protein RadC [Geobacillus sp. Y412MC52] gi|261374823|gb|ACX77566.1| DNA repair protein RadC [Geobacillus sp. Y412MC61] gi|317112541|gb|ADU95033.1| DNA repair protein RadC [Geobacillus sp. Y412MC52] Length = 226 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + G+++ V+ RE+ + ++ SA S+I VHNHPSG+P PS DI Sbjct: 130 IYLNTKNQVIYRKTVFIGSLNASIVHPREVFKEAIKRSAASVICVHNHPSGDPTPSREDI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DH+IIG FVS K + Sbjct: 190 DVTKRLAECGRIIGIELLDHLIIGDQKFVSLKEKGYV 226 >gi|110642215|ref|YP_669945.1| putative radC-like protein YeeS [Escherichia coli 536] gi|110343807|gb|ABG70044.1| putative radC-like protein YeeS [Escherichia coli 536] Length = 158 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ E+++ L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPWEVIKCALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158 >gi|227821958|ref|YP_002825929.1| DNA repair protein RadC [Sinorhizobium fredii NGR234] gi|254789656|sp|C3MBW4|Y1397_RHISN RecName: Full=UPF0758 protein NGR_c13970 gi|227340958|gb|ACP25176.1| DNA repair protein RadC [Sinorhizobium fredii NGR234] Length = 263 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 66/96 (68%), Positives = 75/96 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ +GTIDH PVY RE+V+R LELSAT++IL HNHPSG+P PS ADI Sbjct: 167 LFLDKRNALIADEVQQQGTIDHTPVYPREVVKRALELSATALILAHNHPSGDPTPSRADI 226 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 MT+ I PL I VHDH+IIGKD VS KGLR+ Sbjct: 227 EMTKLIAEAAKPLGITVHDHVIIGKDGHVSMKGLRL 262 >gi|253771521|ref|YP_003034352.1| DNA repair protein RadC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163566|ref|YP_003046674.1| DNA repair protein RadC [Escherichia coli B str. REL606] gi|297521446|ref|ZP_06939832.1| DNA repair protein RadC [Escherichia coli OP50] gi|242379162|emb|CAQ33964.1| hypothetical protein B21_03447 [Escherichia coli BL21(DE3)] gi|253322565|gb|ACT27167.1| DNA repair protein RadC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975467|gb|ACT41138.1| DNA repair protein RadC [Escherichia coli B str. REL606] gi|253979623|gb|ACT45293.1| DNA repair protein RadC [Escherichia coli BL21(DE3)] Length = 222 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGKYVSFAERGWI 222 >gi|160947462|ref|ZP_02094629.1| hypothetical protein PEPMIC_01396 [Parvimonas micra ATCC 33270] gi|158446596|gb|EDP23591.1| hypothetical protein PEPMIC_01396 [Parvimonas micra ATCC 33270] Length = 287 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N +I+ + S+G ++ V+ RE+ + L SA SII +HNHPSG+P PS DI Sbjct: 190 LLLDTKNKIISWDEISKGDLNSSIVHPREVFKYALRYSANSIICLHNHPSGDPTPSSQDI 249 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + + I + DHIIIG + +VS K ++ Sbjct: 250 DITKRLEEVGDLVGIRLLDHIIIGYNKYVSLKEKGLM 286 >gi|229846012|ref|ZP_04466124.1| DNA repair protein RadC [Haemophilus influenzae 7P49H1] gi|229811016|gb|EEP46733.1| DNA repair protein RadC [Haemophilus influenzae 7P49H1] Length = 214 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 118 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 178 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 214 >gi|222110476|ref|YP_002552740.1| DNA repair protein Radc [Acidovorax ebreus TPSY] gi|221729920|gb|ACM32740.1| DNA repair protein RadC [Acidovorax ebreus TPSY] Length = 168 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI RGTID VY RE+V+ L L+A +++ HNHPSG+P PS AD Sbjct: 72 LFLDSQHRLIEYVELFRGTIDQASVYPREVVKEALRLNAAAVVFSHNHPSGSPEPSQADR 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ DHI++G SF ++ Sbjct: 132 VLTQRLKEALALVDVRTLDHIVVGGAVTTSFAECGLL 168 >gi|257888395|ref|ZP_05668048.1| DNA repair protein RadC [Enterococcus faecium 1,141,733] gi|257824449|gb|EEV51381.1| DNA repair protein RadC [Enterococcus faecium 1,141,733] Length = 230 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G+++ + REI + A I+L HNHPSGN PS D+ Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N T+ I + I V DH+IIG+ + S + ++ Sbjct: 191 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGLM 227 >gi|254513496|ref|ZP_05125561.1| DNA repair protein RadC [Rhodobacteraceae bacterium KLH11] gi|221532500|gb|EEE35496.1| DNA repair protein RadC [Rhodobacteraceae bacterium KLH11] Length = 312 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 54/97 (55%), Positives = 74/97 (76%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N+LI+DE Q++GT+DHVPVY REIV+R LEL+A+S+ILVHNHPSG+P PS +DI Sbjct: 213 LYLDRKNVLISDEEQAKGTVDHVPVYPREIVKRALELNASSLILVHNHPSGDPTPSRSDI 272 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT ++ + L I++HDH+IIGK SF + Sbjct: 273 EMTDRVLDACDTLGILIHDHVIIGKKEEYSFSANGFL 309 >gi|285017189|ref|YP_003374900.1| DNA repair protein radc [Xanthomonas albilineans GPE PC73] gi|283472407|emb|CBA14912.1| probable dna repair protein radc [Xanthomonas albilineans] Length = 224 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +A E +GT+D V+ RE+V+R L L+A +II+ HNHPSGNP PS AD Sbjct: 128 LFLDTRHRWLAFEELFQGTVDWTEVHPREVVRRALTLNAAAIIIGHNHPSGNPEPSSADF 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+ +++ + DH IIG +S I Sbjct: 188 AVTERLRKALDLIDVRLLDHFIIGDGMPISLASRGWI 224 >gi|308174501|ref|YP_003921206.1| DNA repair protein [Bacillus amyloliquefaciens DSM 7] gi|307607365|emb|CBI43736.1| putative DNA repair protein [Bacillus amyloliquefaciens DSM 7] gi|328554420|gb|AEB24912.1| hypothetical protein BAMTA208_13755 [Bacillus amyloliquefaciens TA208] gi|328912824|gb|AEB64420.1| putative DNA repair protein [Bacillus amyloliquefaciens LL3] Length = 231 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I G+++ V+ RE+ + + SA S I VHNHPSG+P PS DI Sbjct: 135 LYLNTKNQVIHKRTIFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + N + I + DH++IG FVS K + Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231 >gi|85859097|ref|YP_461299.1| DNA repair protein [Syntrophus aciditrophicus SB] gi|85722188|gb|ABC77131.1| DNA repair protein [Syntrophus aciditrophicus SB] Length = 308 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 66/97 (68%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N +IA E +G ++ VY R++++R L ++++ILVHNHPSG PSDADI Sbjct: 210 LYLDTQNRIIAFETIQKGIVNQAVVYPRQVIERALSHKSSALILVHNHPSGFVKPSDADI 269 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I T L+I+VHDH+IIG++ F SF+ I+ Sbjct: 270 RLTRTITDTAKLLDIMVHDHLIIGENRFFSFREEGIM 306 >gi|268325704|emb|CBH39292.1| probable DNA repair protein radC homolog [uncultured archaeon] Length = 330 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N I DE GT++ VY REIV+ + +A S+I VHNHPSG+P PS +D Sbjct: 215 IFLDSANQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDR 274 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++I N + I V DHIIIG + + SF ++ Sbjct: 275 AITEDLIYACNLVQITVLDHIIIGDNVYFSFADEGLL 311 >gi|153834271|ref|ZP_01986938.1| DNA repair protein RadC [Vibrio harveyi HY01] gi|148869373|gb|EDL68382.1| DNA repair protein RadC [Vibrio harveyi HY01] Length = 305 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + + + E GT++ VY RE+V++ L +A+++I HNHPSG PS AD Sbjct: 209 IFLDNQHRVRSSEELFTGTVNAASVYPREVVKKALAENASAVIFYHNHPSGVAEPSQADR 268 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I L +++ V DH ++ + VSF I Sbjct: 269 RITRRLIDALALIDVRVLDHFVVSFEDTVSFAERGWI 305 >gi|145640620|ref|ZP_01796203.1| DNA repair protein RadC [Haemophilus influenzae R3021] gi|145274546|gb|EDK14409.1| DNA repair protein RadC [Haemophilus influenzae 22.4-21] Length = 221 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 185 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 221 >gi|68249540|ref|YP_248652.1| DNA repair protein RadC [Haemophilus influenzae 86-028NP] gi|68057739|gb|AAX87992.1| DNA repair protein RadC homolog [Haemophilus influenzae 86-028NP] Length = 234 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 138 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 234 >gi|21233283|ref|NP_639200.1| DNA repair protein RadC [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770241|ref|YP_245003.1| DNA repair protein RadC [Xanthomonas campestris pv. campestris str. 8004] gi|25009021|sp|Q8P456|Y3860_XANCP RecName: Full=UPF0758 protein XCC3860 gi|81303811|sp|Q4UPP0|Y3944_XANC8 RecName: Full=UPF0758 protein XC_3944 gi|21115121|gb|AAM43091.1| DNA repair protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575573|gb|AAY50983.1| DNA repair protein [Xanthomonas campestris pv. campestris str. 8004] Length = 225 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + IA E GTID ++ RE+V+R L +A ++++ HNHPSGNP PS+AD Sbjct: 128 LFLDSRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSEADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L ++I + DH +IG VS + Sbjct: 188 AVTQRLLQALGLVDIRLLDHFVIGDGRPVSLAERGWV 224 >gi|197120145|ref|YP_002140572.1| DNA repair protein RadC [Geobacter bemidjiensis Bem] gi|197089505|gb|ACH40776.1| protein of unknown function DUF2466 [Geobacter bemidjiensis Bem] Length = 231 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N +I+ S G+++ V+ RE+ + SA ++IL+HNHP+G+P PS D+ Sbjct: 135 LLLDGKNRIISRAQISEGSLNQSIVHPREVFNVAVRHSAAAMILLHNHPTGDPAPSPEDM 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I V DHIIIG++ F SF + Sbjct: 195 EVTRRLCEAGQLLGIRVLDHIIIGENEFYSFAEHGRL 231 >gi|323166879|gb|EFZ52618.1| DNA repair radC domain protein [Shigella sonnei 53G] Length = 171 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 75 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 134 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 135 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 171 >gi|262273497|ref|ZP_06051311.1| DNA repair protein RadC [Grimontia hollisae CIP 101886] gi|262222475|gb|EEY73786.1| DNA repair protein RadC [Grimontia hollisae CIP 101886] Length = 224 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 45/97 (46%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N IADE+ GTI+ VY RE+V+R LEL A ++IL HNHPSG PS+AD Sbjct: 128 LYLDNQNRPIADEILFEGTINTAGVYPREVVKRSLELGANAVILAHNHPSGIAEPSNADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I L ++I + DH++IG VSF I Sbjct: 188 HITHRIGDALALVDIRLLDHMVIGDGDVVSFAERGWI 224 >gi|167035736|ref|YP_001670967.1| DNA repair protein RadC [Pseudomonas putida GB-1] gi|166862224|gb|ABZ00632.1| DNA repair protein RadC [Pseudomonas putida GB-1] Length = 162 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGT+D VY RE+V+ LE +A ++I+VHNHPSG+P PS AD Sbjct: 66 LLLDSKHRVIGFRELFRGTLDGASVYPREVVKIALEHNAAAVIMVHNHPSGDPEPSQADR 125 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + LN + + DH+++G + VS + Sbjct: 126 TLTTTLKNALNMVGTRILDHVVVGHEGCVSLAEQGYL 162 >gi|320666351|gb|EFX33350.1| hypothetical protein ECOSU61_04303 [Escherichia coli O157:H7 str. LSU-61] Length = 222 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +N+ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMNLRVLDHIVIGRGEYVSFAERGWI 222 >gi|154686939|ref|YP_001422100.1| DNA repair protein RadC [Bacillus amyloliquefaciens FZB42] gi|166218774|sp|A7Z793|Y2509_BACA2 RecName: Full=UPF0758 protein RBAM_025090 gi|154352790|gb|ABS74869.1| RadC [Bacillus amyloliquefaciens FZB42] Length = 231 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I G+++ V+ RE+ + + SA S I VHNHPSG+P PS DI Sbjct: 135 LYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + N + I + DH++IG FVS K + Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231 >gi|15640534|ref|NP_230161.1| DNA repair protein RadC-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|153822183|ref|ZP_01974850.1| DNA repair protein RadC family protein [Vibrio cholerae B33] gi|229509016|ref|ZP_04398504.1| DNA repair protein RadC [Vibrio cholerae B33] gi|229519684|ref|ZP_04409127.1| DNA repair protein RadC [Vibrio cholerae RC9] gi|229606200|ref|YP_002876848.1| DNA repair protein RadC [Vibrio cholerae MJ-1236] gi|254850747|ref|ZP_05240097.1| DNA repair protein RadC family protein [Vibrio cholerae MO10] gi|13431999|sp|Q9KUK8|Y510_VIBCH RecName: Full=UPF0758 protein VC_0510 gi|9654937|gb|AAF93680.1| DNA repair protein RadC-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126520318|gb|EAZ77541.1| DNA repair protein RadC family protein [Vibrio cholerae B33] gi|229344373|gb|EEO09348.1| DNA repair protein RadC [Vibrio cholerae RC9] gi|229353941|gb|EEO18875.1| DNA repair protein RadC [Vibrio cholerae B33] gi|229368855|gb|ACQ59278.1| DNA repair protein RadC [Vibrio cholerae MJ-1236] gi|254846452|gb|EET24866.1| DNA repair protein RadC family protein [Vibrio cholerae MO10] Length = 157 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + +GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + TL +++ V DH I+ D SF + Sbjct: 122 RITERLKDTLALVDVRVLDH-IVTGDTCTSFAERGWL 157 >gi|227354791|ref|ZP_03839208.1| DNA repair protein [Proteus mirabilis ATCC 29906] gi|227165109|gb|EEI49940.1| DNA repair protein [Proteus mirabilis ATCC 29906] Length = 165 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +I E +GT+D V V+ REI+++ ++ +A SIIL HNHPSG PS AD Sbjct: 69 LFLDNQNQMIDCEEMFKGTVDRVEVHPREIIRQSIKKNAASIILAHNHPSGLSEPSLADK 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I T + I V DH+++G D VSF + Sbjct: 129 QMTEKIFTACQLVGIKVLDHLVVGHDNCVSFAERGWL 165 >gi|161615563|ref|YP_001589528.1| hypothetical protein SPAB_03337 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|200390680|ref|ZP_03217291.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205351604|ref|YP_002225405.1| hypothetical protein SG0271 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|161364927|gb|ABX68695.1| hypothetical protein SPAB_03337 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|199603125|gb|EDZ01671.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205271385|emb|CAR36178.1| putative exported protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326626631|gb|EGE32974.1| Putative exported protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 159 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E GTI+H V+ RE+V+ L+ +A ++I+ H HPSG +PS AD Sbjct: 63 LFLDNQHRLIAHETLFSGTINHTQVHPREVVKSGLKHNAAAVIVAHCHPSGLADPSLADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+ ++I + DH+++G VSF + Sbjct: 123 QITERLRQALDLVDIRLLDHLVVGGMEIVSFAERGWL 159 >gi|220936022|ref|YP_002514921.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7] gi|219997332|gb|ACL73934.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7] Length = 166 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +IA E GTID VY R +++R +E + +++I HNHPSG PS AD Sbjct: 70 VFLDSQHRVIAFEPMFHGTIDGASVYPRAVLKRAIEHNCSAVIFAHNHPSGVTEPSHADK 129 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + L +++ V DH I+G++ SF ++ Sbjct: 130 AITTRLKSVLELVDVRVLDHFIVGEETPFSFAEAGLL 166 >gi|254448902|ref|ZP_05062357.1| DNA repair protein RadC [gamma proteobacterium HTCC5015] gi|198261439|gb|EDY85729.1| DNA repair protein RadC [gamma proteobacterium HTCC5015] Length = 224 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + +I E RGT+D VY RE+V+ L+ +A ++I HNHPSG PS AD Sbjct: 128 LWLDTRHRVILYEELFRGTLDGASVYPREVVKAALKHNAAAVIFAHNHPSGIAEPSRADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L ++I V DHI+IG S ++ Sbjct: 188 HITRRLKDALGLVDIRVLDHIVIGDGEHSSLANRGLL 224 >gi|300024876|ref|YP_003757487.1| DNA repair protein RadC [Hyphomicrobium denitrificans ATCC 51888] gi|299526697|gb|ADJ25166.1| DNA repair protein RadC [Hyphomicrobium denitrificans ATCC 51888] Length = 254 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 63/97 (64%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ RGT+DH PVY+RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 158 LFLDKKNALIADEVQGRGTVDHTPVYVREVVKRALELSATAIILVHNHPSGDPTPSRADI 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ II PL + VHDH+I+G+ S K LR+I Sbjct: 218 DVTKQIIDAAKPLGVTVHDHVIVGRHGHASLKALRLI 254 >gi|297537568|ref|YP_003673337.1| DNA repair protein RadC [Methylotenera sp. 301] gi|297256915|gb|ADI28760.1| DNA repair protein RadC [Methylotenera sp. 301] Length = 224 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N ++ E GT+ VY RE+V+R L +A S+I HNHPSG S AD Sbjct: 128 LFLDAQNRVVTTEEMFSGTLTQTSVYPREVVKRALHHNAASVIFAHNHPSGLAQQSQADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ + +SF ++ Sbjct: 188 LITKQLKEALALVDVRVLDHFIVAGNTTLSFVERGLL 224 >gi|319775112|ref|YP_004137600.1| DNA repair protein RadC-like protein [Haemophilus influenzae F3047] gi|309973545|gb|ADO96746.1| Conserved hypothetical protein [Haemophilus influenzae R2846] gi|317449703|emb|CBY85910.1| DNA repair protein RadC homolog [Haemophilus influenzae F3047] Length = 221 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 185 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 221 >gi|260847121|ref|YP_003224899.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009] gi|257762268|dbj|BAI33765.1| predicted DNA repair protein [Escherichia coli O103:H2 str. 12009] Length = 180 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+ E G+++HV V+ RE+V+ L +A +++L HNHPSG+P PS D Sbjct: 84 LYLDNQHRLLESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDR 143 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + L +++ DH+++G+D VSF + Sbjct: 144 NITGRLKEALELVDVKTLDHLVVGRDGIVSFAERGWL 180 >gi|257897231|ref|ZP_05676884.1| DNA repair protein RadC [Enterococcus faecium Com12] gi|293378003|ref|ZP_06624181.1| DNA repair protein RadC [Enterococcus faecium PC4.1] gi|293570378|ref|ZP_06681435.1| DNA repair protein RadC [Enterococcus faecium E980] gi|257833796|gb|EEV60217.1| DNA repair protein RadC [Enterococcus faecium Com12] gi|291609556|gb|EFF38821.1| DNA repair protein RadC [Enterococcus faecium E980] gi|292643368|gb|EFF61500.1| DNA repair protein RadC [Enterococcus faecium PC4.1] Length = 230 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G+++ + REI + A I+L HNHPSGN PS D+ Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N T+ I + I V DH+IIG+ + S + ++ Sbjct: 191 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGLM 227 >gi|83592071|ref|YP_425823.1| DNA repair protein RadC [Rhodospirillum rubrum ATCC 11170] gi|83574985|gb|ABC21536.1| DNA repair protein RadC [Rhodospirillum rubrum ATCC 11170] Length = 243 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 49/96 (51%), Positives = 66/96 (68%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIADE+Q GTI+H PVY RE+ +R LEL A +II+VHNHPSG+P PS AD Sbjct: 147 LFLDNRNRLIADELQQTGTINHTPVYPREVARRALELHAAAIIMVHNHPSGDPAPSAADQ 206 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +MT + L + + +HDHI++ + VSF+ + Sbjct: 207 DMTLQVRDALRAVGVGLHDHIVVARGGHVSFRSQGL 242 >gi|28198053|ref|NP_778367.1| DNA repair protein RadC [Xylella fastidiosa Temecula1] gi|32129952|sp|Q87F21|Y117_XYLFT RecName: Full=UPF0758 protein PD_0117 gi|28056113|gb|AAO28016.1| DNA repair protein [Xylella fastidiosa Temecula1] gi|307579143|gb|ADN63112.1| DNA repair protein RadC [Xylella fastidiosa subsp. fastidiosa GB514] Length = 224 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + I+ E GTI+ V+ RE+V+R L L+A ++I+ HNHPSGN PS AD Sbjct: 128 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADQ 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ +++ + DH +IG A VSF + Sbjct: 188 MITQRLKNALDLIDVRLVDHFVIGDGAPVSFAEHGWL 224 >gi|191165826|ref|ZP_03027664.1| DNA repair protein RadC [Escherichia coli B7A] gi|190904150|gb|EDV63861.1| DNA repair protein RadC [Escherichia coli B7A] Length = 157 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+ E GTI+ V+ REIV+ L +A ++IL HNHPSG PS AD Sbjct: 61 LYLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T NI+ TL+ +N+ V DH IIG +SF + Sbjct: 121 LITTNIVKTLDLVNVRVLDHFIIGAGDVLSFAERGWL 157 >gi|293557235|ref|ZP_06675783.1| DNA repair protein RadC [Enterococcus faecium E1039] gi|291600599|gb|EFF30903.1| DNA repair protein RadC [Enterococcus faecium E1039] Length = 230 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G+++ + REI + A I+L HNHPSGN PS D+ Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N T+ I + I V DH+IIG+ + S + ++ Sbjct: 191 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 227 >gi|229918383|ref|YP_002887029.1| DNA repair protein RadC [Exiguobacterium sp. AT1b] gi|229469812|gb|ACQ71584.1| DNA repair protein RadC [Exiguobacterium sp. AT1b] Length = 209 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA + G ++ V+ R++ + L+LSA I VHNHPSG+ PS DI Sbjct: 111 LYLNTKNQLIARKTLFVGGLNSSIVHPRDVFREALKLSAACFIAVHNHPSGDATPSREDI 170 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +++ ++ N + I DH+IIG+D +VS K + Sbjct: 171 EVSERLVEAGNIVGIACLDHVIIGEDHYVSMKQRGYM 207 >gi|262191336|ref|ZP_06049528.1| DNA repair protein RadC [Vibrio cholerae CT 5369-93] gi|262032791|gb|EEY51337.1| DNA repair protein RadC [Vibrio cholerae CT 5369-93] Length = 157 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157 >gi|169831623|ref|YP_001717605.1| DNA repair protein RadC [Candidatus Desulforudis audaxviator MP104C] gi|229485551|sp|B1I4S0|Y1467_DESAP RecName: Full=UPF0758 protein Daud_1467 gi|169638467|gb|ACA59973.1| DNA repair protein RadC [Candidatus Desulforudis audaxviator MP104C] Length = 230 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N ++A E S GT++ V+ RE+ + + SA ++ILVHNHPSG+P PS DI Sbjct: 134 LVLNTKNRVLAVEKVSVGTLNSSSVHPRELFKNAIRRSAAALILVHNHPSGDPAPSPQDI 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +TQ + + I V DHIIIG + F S K + Sbjct: 194 ELTQRLFEAGEIVGIKVLDHIIIGDNKFTSLKLEGL 229 >gi|145632338|ref|ZP_01788073.1| DNA repair protein RadC [Haemophilus influenzae 3655] gi|145634128|ref|ZP_01789839.1| DNA repair protein RadC [Haemophilus influenzae PittAA] gi|145637257|ref|ZP_01792918.1| DNA repair protein RadC [Haemophilus influenzae PittHH] gi|229843987|ref|ZP_04464128.1| DNA repair protein RadC [Haemophilus influenzae 6P18H1] gi|144987245|gb|EDJ93775.1| DNA repair protein RadC [Haemophilus influenzae 3655] gi|145268572|gb|EDK08565.1| DNA repair protein RadC [Haemophilus influenzae PittAA] gi|145269509|gb|EDK09451.1| DNA repair protein RadC [Haemophilus influenzae PittHH] gi|229812981|gb|EEP48669.1| DNA repair protein RadC [Haemophilus influenzae 6P18H1] Length = 214 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 118 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 178 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 214 >gi|157373074|ref|YP_001481063.1| DNA repair protein RadC [Serratia proteamaculans 568] gi|172047792|sp|A8GLE5|Y4842_SERP5 RecName: Full=UPF0758 protein Spro_4842 gi|157324838|gb|ABV43935.1| DNA repair protein RadC [Serratia proteamaculans 568] Length = 227 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I + GTI V VY REIV+ L+ +A +IIL HNHPSG PS AD Sbjct: 131 LFLDNQHRVIRHQEMFAGTISSVVVYPREIVREALKANAAAIILAHNHPSGKAEPSHADR 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I V DH++IG+ VSF + Sbjct: 191 LITEQVVNACLLLEIRVLDHLVIGRGECVSFAERGWL 227 >gi|264679954|ref|YP_003279863.1| DNA repair protein RadC [Comamonas testosteroni CNB-2] gi|262210469|gb|ACY34567.1| DNA repair protein RadC [Comamonas testosteroni CNB-2] Length = 230 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N L+A E RGT+ VY RE+V R L A ++IL HNHPSGN PS AD Sbjct: 134 LFLDSQNRLLALEEMFRGTLTQTSVYPREVVLRALHHQAGAVILAHNHPSGNVQPSSADS 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DHII+G A S ++ Sbjct: 194 ALTATLKAALALIDVRVLDHIIVGPGAACSMAEEGLL 230 >gi|148560082|ref|YP_001259197.1| DNA repair protein RadC [Brucella ovis ATCC 25840] gi|254706546|ref|ZP_05168374.1| DNA repair protein RadC [Brucella pinnipedialis M163/99/10] gi|256160029|ref|ZP_05457727.1| DNA repair protein RadC [Brucella ceti M490/95/1] gi|256255238|ref|ZP_05460774.1| DNA repair protein RadC [Brucella ceti B1/94] gi|261222434|ref|ZP_05936715.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261314006|ref|ZP_05953203.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|265998402|ref|ZP_06110959.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|148371339|gb|ABQ61318.1| DNA repair protein RadC [Brucella ovis ATCC 25840] gi|260921018|gb|EEX87671.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261303032|gb|EEY06529.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|262553009|gb|EEZ08860.1| conserved hypothetical protein [Brucella ceti M490/95/1] Length = 246 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 60/92 (65%), Positives = 71/92 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 +MT+ ++ LNI VHDH+IIGK S + Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLR 244 >gi|110807685|ref|YP_691205.1| DNA repair protein RadC [Shigella flexneri 5 str. 8401] gi|110617233|gb|ABF05900.1| DNA repair protein [Shigella flexneri 5 str. 8401] Length = 209 Score = 131 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 113 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 172 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 173 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 209 >gi|312963850|ref|ZP_07778321.1| hypothetical protein PFWH6_5769 [Pseudomonas fluorescens WH6] gi|311281885|gb|EFQ60495.1| hypothetical protein PFWH6_5769 [Pseudomonas fluorescens WH6] Length = 224 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E S+GTID VY R++V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDSRHRVLGFEALSQGTIDTALVYPRQVVKRALAYNAAALILCHNHPSGVAQPSAADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + L +++ V DHII+G +S + Sbjct: 188 KMTKTLQKALEVVDVRVLDHIIVGDGDPLSMAEYGWM 224 >gi|292486566|ref|YP_003529434.1| glutaredoxin 3 [Erwinia amylovora CFBP1430] gi|292897804|ref|YP_003537173.1| DNA repair protein [Erwinia amylovora ATCC 49946] gi|291197652|emb|CBJ44747.1| DNA repair protein [Erwinia amylovora ATCC 49946] gi|291551981|emb|CBA19018.1| Glutaredoxin 3 [Erwinia amylovora CFBP1430] gi|312170627|emb|CBX78890.1| Glutaredoxin 3 [Erwinia amylovora ATCC BAA-2158] Length = 223 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F D + +I GT++ V V+ REIV+ L+ +A ++IL HNHPSG PS AD Sbjct: 127 IFFDNQHRVIHTSEMFSGTLNSVEVHPREIVREALKRNAAALILAHNHPSGLAEPSRADR 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I+ + +NI V DH++IG+ +VSF + Sbjct: 187 DITLQIVRACSLMNIRVLDHMVIGRGEYVSFAERGWM 223 >gi|311069296|ref|YP_003974219.1| DNA repair protein RadC [Bacillus atrophaeus 1942] gi|310869813|gb|ADP33288.1| DNA repair protein RadC [Bacillus atrophaeus 1942] Length = 231 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I G+++ V+ RE+ + + SA S I +HNHPSG+P PS DI Sbjct: 135 LYLNTKNEVIHKRTIFIGSLNSSIVHPREVFKEAFKRSAASFICIHNHPSGDPTPSREDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + N + I + DH++IG FVS K + Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231 >gi|209917488|ref|YP_002291572.1| hypothetical protein ECSE_0297 [Escherichia coli SE11] gi|209910747|dbj|BAG75821.1| hypothetical phage protein [Escherichia coli SE11] Length = 180 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+ E G+I+HV V+ RE+V+ L +A +++L HNHPSG+P PS D Sbjct: 84 LYLDNQHRLLESETLFAGSINHVQVHPREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDR 143 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + L +++ DH++IG D VSF I Sbjct: 144 NITGRLKEALALVDVNTLDHLVIGSDGIVSFAERGWI 180 >gi|317494719|ref|ZP_07953131.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917321|gb|EFV38668.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA] Length = 228 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E GTI+ V VY REIV+ L+++A ++IL HNHPSG PS AD Sbjct: 132 LFLDNQHRVIRSEEMFSGTINCVDVYPREIVRGALKVNAVALILAHNHPSGIAEPSAADR 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L+I V DH++IG VSF + Sbjct: 192 VLTERVVKACALLDIRVLDHMVIGHGQSVSFAERGWL 228 >gi|28867326|ref|NP_789945.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato str. DC3000] gi|213970685|ref|ZP_03398810.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato T1] gi|301382572|ref|ZP_07230990.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato Max13] gi|302063061|ref|ZP_07254602.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato K40] gi|302133591|ref|ZP_07259581.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato NCPPB 1108] gi|37999601|sp|Q88BD1|Y086_PSESM RecName: Full=UPF0758 protein PSPTO_0086 gi|28850560|gb|AAO53640.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato str. DC3000] gi|213924519|gb|EEB58089.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato T1] gi|331018553|gb|EGH98609.1| hypothetical protein PLA106_21168 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 224 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ RGTI+ V+ R++V+R L +A S+IL HNHPSG PS +DI Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRALAHNAASLILCHNHPSGITTPSRSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ V DH+I+G +S ++ Sbjct: 188 DLTKRLKEALKLVDVHVLDHVIVGDGEPLSMVEKGLM 224 >gi|227550362|ref|ZP_03980411.1| DNA repair protein RadC [Enterococcus faecium TX1330] gi|227180501|gb|EEI61473.1| DNA repair protein RadC [Enterococcus faecium TX1330] Length = 225 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G+++ + REI + A I+L HNHPSGN PS D+ Sbjct: 126 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N T+ I + I V DH+IIG+ + S + ++ Sbjct: 186 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGLM 222 >gi|166713831|ref|ZP_02245038.1| DNA repair protein RadC [Xanthomonas oryzae pv. oryzicola BLS256] Length = 225 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LF+D + IA E GTID ++ RE+V+R L +A ++I+ HNHPSGNP PS+AD Sbjct: 128 LFMDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ +L ++I + DH +IG VS + Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSLAERGWL 224 >gi|260576196|ref|ZP_05844189.1| DNA repair protein RadC [Rhodobacter sp. SW2] gi|259021676|gb|EEW24979.1| DNA repair protein RadC [Rhodobacter sp. SW2] Length = 256 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+LIADE Q++GT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS+ADI Sbjct: 160 LFLDRKNVLIADEAQAKGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSEADI 219 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I L I ++DH+IIGKD +SF+ + Sbjct: 220 SVTMQIQDAAATLGITLYDHLIIGKDRELSFRAQGYL 256 >gi|257885023|ref|ZP_05664676.1| DNA repair protein RadC [Enterococcus faecium 1,231,501] gi|257890249|ref|ZP_05669902.1| DNA repair protein RadC [Enterococcus faecium 1,231,410] gi|258616808|ref|ZP_05714578.1| DNA repair protein RadC [Enterococcus faecium DO] gi|260559754|ref|ZP_05831934.1| DNA repair protein RadC [Enterococcus faecium C68] gi|293559749|ref|ZP_06676270.1| DNA repair protein RadC [Enterococcus faecium E1162] gi|293567615|ref|ZP_06678959.1| DNA repair protein RadC [Enterococcus faecium E1071] gi|257820875|gb|EEV48009.1| DNA repair protein RadC [Enterococcus faecium 1,231,501] gi|257826609|gb|EEV53235.1| DNA repair protein RadC [Enterococcus faecium 1,231,410] gi|260074422|gb|EEW62744.1| DNA repair protein RadC [Enterococcus faecium C68] gi|291589716|gb|EFF21520.1| DNA repair protein RadC [Enterococcus faecium E1071] gi|291606297|gb|EFF35710.1| DNA repair protein RadC [Enterococcus faecium E1162] Length = 230 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G+++ + REI + A I+L HNHPSGN PS D+ Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N T+ I + I V DH+IIG+ + S + ++ Sbjct: 191 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 227 >gi|261210081|ref|ZP_05924379.1| DNA repair protein RadC [Vibrio sp. RC341] gi|260840846|gb|EEX67388.1| DNA repair protein RadC [Vibrio sp. RC341] Length = 157 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157 >gi|325917528|ref|ZP_08179731.1| DNA replication and repair protein RadC [Xanthomonas vesicatoria ATCC 35937] gi|325536244|gb|EGD08037.1| DNA replication and repair protein RadC [Xanthomonas vesicatoria ATCC 35937] Length = 243 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + IA E GTID ++ RE+V+R L +A ++I+ HNHPSGNP PS+AD Sbjct: 146 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L+ ++I + DH +IG VS + Sbjct: 206 AVTRRLLQGLDLVDIRLLDHFVIGDGRPVSLAERGWL 242 >gi|85708932|ref|ZP_01039998.1| DNA repair protein RadC [Erythrobacter sp. NAP1] gi|85690466|gb|EAQ30469.1| DNA repair protein RadC [Erythrobacter sp. NAP1] Length = 272 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 64/97 (65%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LI D G+ID ++ RE+++R +++ A+++ILVHNHPSG+P PS AD+ Sbjct: 176 LYLDAKNRLIDDHHVGDGSIDEAAIHPREVIRRAMDVGASALILVHNHPSGSPEPSRADV 235 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I L + +HDH+I+G++ VS + +I Sbjct: 236 QITQKIAEAGRLLGVTLHDHVIVGREGHVSLRAKGLI 272 >gi|118577341|ref|YP_899581.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379] gi|118504846|gb|ABL01328.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379] Length = 168 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N ++ + S G+++ V+ RE+ + L +A +II VH HPSG+PNPS D+ Sbjct: 72 LHLDGKNRIMCMDRVSIGSLNQSIVHPREVFKTALLSNAAAIICVHQHPSGDPNPSSEDL 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I V DHI++G + ++SF ++ Sbjct: 132 SITKRLKEAGEIMGIRVLDHIVVGHEDYISFVEKGLM 168 >gi|71899272|ref|ZP_00681434.1| DNA repair protein RadC [Xylella fastidiosa Ann-1] gi|71731005|gb|EAO33074.1| DNA repair protein RadC [Xylella fastidiosa Ann-1] Length = 242 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + I+ E GTI+ V+ RE+V+R L L+A ++I+ HNHPSGN PS AD Sbjct: 146 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADQ 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ +++ + DH +IG A VSF + Sbjct: 206 MITQRLKNALDLIDVRLVDHFVIGDGAPVSFAEHGWL 242 >gi|261820014|ref|YP_003258120.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163] gi|261604027|gb|ACX86513.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163] Length = 158 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N LI+ E GTI+ V V+ E+ ++ + L+A ++I HNHPSGN PS+AD Sbjct: 62 LFLNNQNRLISCEFLFAGTINSVEVHPGEVARQAIRLNAAAVIFAHNHPSGNAEPSNADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L+ + I V DH+++G VSF + Sbjct: 122 KITEKLVNALSLIEIRVLDHVVVGHGEIVSFAERGWL 158 >gi|261405382|ref|YP_003241623.1| DNA repair protein RadC [Paenibacillus sp. Y412MC10] gi|329928472|ref|ZP_08282340.1| DNA repair protein RadC [Paenibacillus sp. HGF5] gi|261281845|gb|ACX63816.1| DNA repair protein RadC [Paenibacillus sp. Y412MC10] gi|328937731|gb|EGG34139.1| DNA repair protein RadC [Paenibacillus sp. HGF5] Length = 229 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N +IA E S G+++ V+ RE+ + ++ S+ S++ HNHPSG+P PS DI Sbjct: 133 VFLNTKNHVIAQETLSMGSLNASIVHPREVFRAAIKCSSASLVCAHNHPSGDPTPSPEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T ++ + I V DH+IIG +FVS K ++ Sbjct: 193 SLTARLVEAGQIVGIDVLDHLIIGDGSFVSLKERGLM 229 >gi|257899232|ref|ZP_05678885.1| DNA repair protein RadC [Enterococcus faecium Com15] gi|257837144|gb|EEV62218.1| DNA repair protein RadC [Enterococcus faecium Com15] Length = 230 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G+++ + REI + A I+L HNHPSGN PS D+ Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N T+ I + I V DH+IIG+ + S + ++ Sbjct: 191 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGLM 227 >gi|134093935|ref|YP_001099010.1| putative DNA repair protein; putative CP4-6 prophage [Herminiimonas arsenicoxydans] gi|133737838|emb|CAL60883.1| putative DNA repair protein RadC [Herminiimonas arsenicoxydans] Length = 175 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F+D N +IA E GTI VY R IVQR + L+A S+IL HNHPSG+ PSDAD Sbjct: 78 VFMDTQNRVIAYEPLFFGTIHQTSVYPRVIVQRAMSLNAASMILAHNHPSGSTQPSDADK 137 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + L +++ V DH IIG++ SF ++ Sbjct: 138 QLTNRLKSLLESIDVRVLDHFIIGEEGTFSFAEHGLL 174 >gi|238796699|ref|ZP_04640205.1| DNA repair protein RadC [Yersinia mollaretii ATCC 43969] gi|238719430|gb|EEQ11240.1| DNA repair protein RadC [Yersinia mollaretii ATCC 43969] Length = 161 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+A E G+I V+ RE+V+ L +A ++IL HNHPSG PS AD Sbjct: 63 LYLDNQHRLLACETLFTGSIRSTEVHPREVVKAALRHNAAAVILAHNHPSGEAEPSQADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L +++ V DH+I+G VSF + Sbjct: 123 QITDRLVNALALVDVKVLDHLIVGGLDIVSFTERGWL 159 >gi|229512565|ref|ZP_04402036.1| DNA repair protein RadC [Vibrio cholerae TMA 21] gi|229350458|gb|EEO15407.1| DNA repair protein RadC [Vibrio cholerae TMA 21] Length = 157 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + +GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFQGTVDAASVYPREVVKTVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDICTSFAERGWL 157 >gi|163733013|ref|ZP_02140457.1| DNA repair protein RadC [Roseobacter litoralis Och 149] gi|161393548|gb|EDQ17873.1| DNA repair protein RadC [Roseobacter litoralis Och 149] Length = 253 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 52/97 (53%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N +IADE Q++GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS +DI Sbjct: 157 LFLDRKNTVIADEEQAKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQSDI 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT I L + +HDH+IIGK +SF+ + Sbjct: 217 SMTDQINAACQTLGLTLHDHLIIGKSTELSFRAEGYL 253 >gi|315641420|ref|ZP_07896493.1| DNA repair protein RadC [Enterococcus italicus DSM 15952] gi|315482807|gb|EFU73330.1| DNA repair protein RadC [Enterococcus italicus DSM 15952] Length = 226 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 52/96 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I E G+++ + REI + + +SA IIL HNHPSGNP PS D+ Sbjct: 129 LYLNTKNEIIKKETLFIGSLNQSVAHPREIFKGAVRVSAARIILTHNHPSGNPKPSSHDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I V DH+IIG +VS + Sbjct: 189 QFTKRVKECGEMMGIEVLDHLIIGTRRYVSLREEGF 224 >gi|253998052|ref|YP_003050115.1| DNA repair protein RadC [Methylovorus sp. SIP3-4] gi|253984731|gb|ACT49588.1| DNA repair protein RadC [Methylovorus sp. SIP3-4] Length = 224 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N ++A E GT+ V+ REIV+R L +A ++IL HNHPSG PS +D Sbjct: 128 IFLDAQNRVLAHEEMFAGTLTQTSVHPREIVKRALYYNAGAVILAHNHPSGVAEPSRSDE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + T L+ +++ V DH ++ + +SF ++ Sbjct: 188 MITAQLKTALDLVDVRVLDHFVVAGNTTLSFAERGLL 224 >gi|260220445|emb|CBA27989.1| DNA repair protein radC homolog [Curvibacter putative symbiont of Hydra magnipapillata] Length = 239 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N L+A E RGT+ VY RE+V R L A +++L HNHPSG+ PS AD Sbjct: 143 LFLDSQNKLLAMEELFRGTLTQTSVYPREVVIRALHHGAAAVVLAHNHPSGSVQPSRADE 202 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHII+G +S +I Sbjct: 203 ALTQTLKAALALVDVRVLDHIIVGPGQALSMAETGLI 239 >gi|296136107|ref|YP_003643349.1| DNA repair protein RadC [Thiomonas intermedia K12] gi|295796229|gb|ADG31019.1| DNA repair protein RadC [Thiomonas intermedia K12] Length = 226 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E SRGT+ VY RE+V+ L L+A ++IL HNHPSG PS AD Sbjct: 130 LFLDNQHQLIASEELSRGTLASTSVYPREVVKAALRLNAGALILAHNHPSGLAEPSAADR 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH+++ + VSF ++ Sbjct: 190 ALTQTLKAALALVDVRVLDHLVVTRHNVVSFAERGLL 226 >gi|71275890|ref|ZP_00652173.1| DNA repair protein RadC [Xylella fastidiosa Dixon] gi|71901383|ref|ZP_00683476.1| DNA repair protein RadC [Xylella fastidiosa Ann-1] gi|170729361|ref|YP_001774794.1| DNA repair protein RadC [Xylella fastidiosa M12] gi|182680681|ref|YP_001828841.1| DNA repair protein RadC [Xylella fastidiosa M23] gi|71163267|gb|EAO12986.1| DNA repair protein RadC [Xylella fastidiosa Dixon] gi|71728842|gb|EAO30980.1| DNA repair protein RadC [Xylella fastidiosa Ann-1] gi|167964154|gb|ACA11164.1| DNA repair protein [Xylella fastidiosa M12] gi|182630791|gb|ACB91567.1| DNA repair protein RadC [Xylella fastidiosa M23] Length = 242 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + I+ E GTI+ V+ RE+V+R L L+A ++I+ HNHPSGN PS AD Sbjct: 146 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADQ 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ +++ + DH +IG A VSF + Sbjct: 206 MITQRLKNALDLIDVRLVDHFVIGDGAPVSFAEHGWL 242 >gi|269103917|ref|ZP_06156614.1| DNA repair protein RadC [Photobacterium damselae subsp. damselae CIP 102761] gi|268163815|gb|EEZ42311.1| DNA repair protein RadC [Photobacterium damselae subsp. damselae CIP 102761] Length = 224 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E GTID VY REIV+R LEL+A + IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVICGEALFFGTIDSASVYPREIVKRSLELNAAAAILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I L ++I V DH +IG VSF + Sbjct: 188 RITQKISDALALVDIRVLDHFVIGDGELVSFAERGWL 224 >gi|117619575|ref|YP_854693.1| DNA repair protein RadC [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166218772|sp|A0KEM8|Y160_AERHH RecName: Full=UPF0758 protein AHA_0160 gi|117560982|gb|ABK37930.1| DNA repair protein RadC [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 224 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I GT+D V+ REIVQ L+ +A ++IL HNHPSG PS AD Sbjct: 128 LLLDNQHRVIQFVELFYGTLDSASVWPREIVQIALKHNAAAVILAHNHPSGVAEPSRADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L ++I V DH++IG VSF + Sbjct: 188 QITDRITAALALIDIRVLDHLVIGDGITVSFAERGWL 224 >gi|69246244|ref|ZP_00603857.1| DNA repair protein RadC [Enterococcus faecium DO] gi|68195345|gb|EAN09794.1| DNA repair protein RadC [Enterococcus faecium DO] Length = 226 Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G+++ + REI + A I+L HNHPSGN PS D+ Sbjct: 127 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N T+ I + I V DH+IIG+ + S + ++ Sbjct: 187 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 223 >gi|260774791|ref|ZP_05883693.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450] gi|260609216|gb|EEX35371.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450] Length = 157 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L + + V DH I+ D+ SF + Sbjct: 122 RITERLKDALALVEVRVLDH-IVTGDSCTSFAERGWL 157 >gi|149184792|ref|ZP_01863110.1| hypothetical protein ED21_28778 [Erythrobacter sp. SD-21] gi|148832112|gb|EDL50545.1| hypothetical protein ED21_28778 [Erythrobacter sp. SD-21] Length = 232 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 65/97 (67%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LI D + + G+ID ++ RE+++R ++ A+++ILVHNHPSG+P PS ADI Sbjct: 136 LYLDTRNRLIDDHLAAEGSIDEAAIHPREVIRRAFDVGASALILVHNHPSGDPEPSRADI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I LNI VHDH+I+G+ + VS + +I Sbjct: 196 QITARIAEAGRLLNITVHDHVIVGRGSHVSLRAKGLI 232 >gi|95931398|ref|ZP_01314108.1| DNA repair protein RadC [Desulfuromonas acetoxidans DSM 684] gi|95132554|gb|EAT14243.1| DNA repair protein RadC [Desulfuromonas acetoxidans DSM 684] Length = 233 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N L+ D S G++ V+ RE+ + SA +++ VHNHPSG+P PS DI Sbjct: 134 LLLDAKNRLLKDVRISEGSLTASIVHPREVFTAVVRESAAAVLFVHNHPSGDPTPSREDI 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ + + L + V DHIIIG D++ S ++ Sbjct: 194 SITQRLKEAGDLLGVRVLDHIIIGHDSYTSLAEQGLM 230 >gi|323955396|gb|EGB51165.1| DNA repair protein RadC [Escherichia coli H263] Length = 98 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 2 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 61 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 62 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 98 >gi|254466524|ref|ZP_05079935.1| DNA repair protein RadC [Rhodobacterales bacterium Y4I] gi|206687432|gb|EDZ47914.1| DNA repair protein RadC [Rhodobacterales bacterium Y4I] Length = 254 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 57/97 (58%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+LIADE Q+RGT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PSD+DI Sbjct: 158 LFLDRKNVLIADEEQARGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSDSDI 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I+ L L I +HDH+IIGK +SF+ ++ Sbjct: 218 GMTDQILAALTALGITLHDHLIIGKSTELSFRAQGLL 254 >gi|323173231|gb|EFZ58860.1| DNA repair protein radC [Escherichia coli LT-68] Length = 214 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 118 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + + + V DHI+IG+ +VSF I Sbjct: 178 LITERIIKSCQFMELRVLDHIVIGRGEYVSFAERGWI 214 >gi|323486933|ref|ZP_08092249.1| DNA repair protein RadC [Clostridium symbiosum WAL-14163] gi|323691981|ref|ZP_08106230.1| DNA repair protein RadC [Clostridium symbiosum WAL-14673] gi|323399796|gb|EGA92178.1| DNA repair protein RadC [Clostridium symbiosum WAL-14163] gi|323503990|gb|EGB19803.1| DNA repair protein RadC [Clostridium symbiosum WAL-14673] Length = 230 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N+LI D + RGT++ RE+ L A IILVHNHPSG+P+PS D Sbjct: 134 MMLNTKNVLIKDSLIFRGTVNMSVASPREMFIEALRYHAVHIILVHNHPSGDPSPSSEDK 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L I + DHIIIG +++ SFK II Sbjct: 194 KLTAQVKEAGALLGIRLLDHIIIGDNSYFSFKERGII 230 >gi|16079856|ref|NP_390682.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str. 168] gi|221310744|ref|ZP_03592591.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str. 168] gi|221315069|ref|ZP_03596874.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319988|ref|ZP_03601282.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str. JH642] gi|221324270|ref|ZP_03605564.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str. SMY] gi|321312335|ref|YP_004204622.1| hypothetical protein BSn5_04835 [Bacillus subtilis BSn5] gi|400964|sp|Q02170|YSXA_BACSU RecName: Full=UPF0758 protein ysxA gi|142854|gb|AAA22396.1| homologous to E. coli radC gene product and to unidentified protein from Staphylococcus aureus [Bacillus subtilis] gi|143162|gb|AAA22583.1| orfB [Bacillus subtilis] gi|2635269|emb|CAB14764.1| putative DNA repair protein [Bacillus subtilis subsp. subtilis str. 168] gi|320018609|gb|ADV93595.1| hypothetical protein BSn5_04835 [Bacillus subtilis BSn5] Length = 231 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I G+++ V+ RE+ + + SA S I VHNHPSG+P PS DI Sbjct: 135 LYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + N + I + DH++IG FVS K + Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231 >gi|325577760|ref|ZP_08148035.1| DNA repair protein RadC [Haemophilus parainfluenzae ATCC 33392] gi|325160505|gb|EGC72631.1| DNA repair protein RadC [Haemophilus parainfluenzae ATCC 33392] Length = 221 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 125 LFLDNQHRLIKKERLFLGTINVTNVYPREIIKESLSCNAAALILAHNHPSGLAEPSYSDK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ II ++I + DH I+GK SF ++ Sbjct: 185 MITQKIIEAAELMDIRILDHFIVGKGTCYSFAEHNLL 221 >gi|84387383|ref|ZP_00990403.1| DNA repair protein [Vibrio splendidus 12B01] gi|84377832|gb|EAP94695.1| DNA repair protein [Vibrio splendidus 12B01] Length = 156 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + LI E +GTID VY RE+V+ L+ +A ++I HNHPSG+ PS AD Sbjct: 61 MLLDNQHRLIEFEELFQGTIDAASVYPREVVKTALKANAAAVIFAHNHPSGDSAPSQADR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DHI++G + SF + Sbjct: 121 RITTRLQDALALIDVRVLDHIVVG-EQCTSFAERGWL 156 >gi|170766630|ref|ZP_02901083.1| DNA repair protein RadC [Escherichia albertii TW07627] gi|170124068|gb|EDS92999.1| DNA repair protein RadC [Escherichia albertii TW07627] Length = 250 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ GT++HV V+ REIV+ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVLTHSRLFSGTLNHVEVHPREIVREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + + + V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMELRVLDHIVIGRGEYVSFAERGWI 222 >gi|325919704|ref|ZP_08181706.1| DNA replication and repair protein RadC [Xanthomonas gardneri ATCC 19865] gi|325549812|gb|EGD20664.1| DNA replication and repair protein RadC [Xanthomonas gardneri ATCC 19865] Length = 225 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + IA E GT+D ++ RE+V+R L +A ++I+ HNHPSGNP PS+AD Sbjct: 128 LYLDTKHHAIAFEELFTGTLDGADIHTREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L+ + I + DH +IG VS + Sbjct: 188 AVTKRLLEALDLVEIRLLDHFVIGDGRPVSLAERGWL 224 >gi|254516157|ref|ZP_05128217.1| DNA repair protein RadC [gamma proteobacterium NOR5-3] gi|219675879|gb|EED32245.1| DNA repair protein RadC [gamma proteobacterium NOR5-3] Length = 132 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E RGTID VY R +V+R LEL+A ++IL HNHPSG PNPS AD Sbjct: 36 LFLDSQHRLIAFERLFRGTIDGASVYPRVVVKRALELNAAALILTHNHPSGLPNPSSADS 95 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L ++I V DHI++G + S ++ Sbjct: 96 KITQRLQDALALVDIRVLDHIVVGVEGTQSMAERGLL 132 >gi|156936681|ref|YP_001436032.1| DNA repair protein RadC [Vibrio harveyi ATCC BAA-1116] gi|156529928|gb|ABU75012.1| hypothetical protein VIBHAR_p08165 [Vibrio harveyi ATCC BAA-1116] Length = 305 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + + + E GT++ VY RE+V++ L +A+++I HNHPSG PS AD Sbjct: 209 IFLDNQHRVRSSEDLFTGTVNAASVYPREVVKKALAENASAVIFYHNHPSGVAEPSQADR 268 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I L +++ V DH ++ + VSF I Sbjct: 269 RITRRLIDALALIDVKVLDHFVVSFEGTVSFAERGWI 305 >gi|229032108|ref|ZP_04188086.1| DNA repair protein radC [Bacillus cereus AH1271] gi|228729198|gb|EEL80196.1| DNA repair protein radC [Bacillus cereus AH1271] Length = 240 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 144 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 203 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 204 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 240 >gi|138896185|ref|YP_001126638.1| DNA repair protein RadC [Geobacillus thermodenitrificans NG80-2] gi|196250140|ref|ZP_03148834.1| DNA repair protein RadC [Geobacillus sp. G11MC16] gi|166218780|sp|A4IRD9|Y2548_GEOTN RecName: Full=UPF0758 protein GTNG_2548 gi|134267698|gb|ABO67893.1| DNA repair protein [Geobacillus thermodenitrificans NG80-2] gi|196210324|gb|EDY05089.1| DNA repair protein RadC [Geobacillus sp. G11MC16] Length = 226 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + G+++ V+ RE+ + ++ SA S+I VHNHPSG+P PS DI Sbjct: 130 IYLNTKNQVIHRKTVFIGSLNASIVHPREVFKEAIKRSAASVICVHNHPSGDPTPSREDI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DH+IIG F+S K + Sbjct: 190 DVTKRLAECGRIIGIELLDHLIIGDQKFISLKEKGYV 226 >gi|82776320|ref|YP_402669.1| putative radC-like protein yeeS [Shigella dysenteriae Sd197] gi|309786791|ref|ZP_07681411.1| DNA repair RadC family protein [Shigella dysenteriae 1617] gi|81240468|gb|ABB61178.1| Putative radC-like protein yeeS [Shigella dysenteriae Sd197] gi|308925484|gb|EFP70971.1| DNA repair RadC family protein [Shigella dysenteriae 1617] Length = 150 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 54 LYLNNQNQLIAGEPLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVIPSKADR 113 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L ++I V DH+I+G SF ++ Sbjct: 114 LITERLVQALGLVDIRVPDHLIVGSSQVFSFAEHGLL 150 >gi|148261604|ref|YP_001235731.1| DNA repair protein RadC [Acidiphilium cryptum JF-5] gi|146403285|gb|ABQ31812.1| DNA repair protein RadC [Acidiphilium cryptum JF-5] Length = 246 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 48/97 (49%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N L+ADEV SRGT++H VY+RE+V+R +E AT++ILVHNHPSG+P+PS D+ Sbjct: 145 IYLDNRNRLLADEVASRGTVNHTQVYVREVVRRAIETRATALILVHNHPSGDPSPSRDDV 204 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + + L+I +HDH+IIGK ++SF+ + Sbjct: 205 EMTREVQRAVALLDITLHDHVIIGKAGWLSFRREGFL 241 >gi|238853957|ref|ZP_04644314.1| DNA repair protein [Lactobacillus gasseri 202-4] gi|282851637|ref|ZP_06261002.1| DNA repair protein RadC [Lactobacillus gasseri 224-1] gi|238833402|gb|EEQ25682.1| DNA repair protein [Lactobacillus gasseri 202-4] gi|282557605|gb|EFB63202.1| DNA repair protein RadC [Lactobacillus gasseri 224-1] Length = 203 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +IA+++ +GT++ + R+I + + ++T+ + HNHPSG+ PS D+ Sbjct: 107 IYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDL 166 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ + I DH I+ + ++SF+ + ++ Sbjct: 167 RFTKKLVEASKCMGIDFLDHFIVTDNTYLSFREMELL 203 >gi|114704379|ref|ZP_01437287.1| DNA repair protein RadC [Fulvimarina pelagi HTCC2506] gi|114539164|gb|EAU42284.1| DNA repair protein RadC [Fulvimarina pelagi HTCC2506] Length = 252 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 63/97 (64%), Positives = 78/97 (80%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ RGT+DH PVY RE+V+R LEL+AT++ILVHNHPSG+P PS ADI Sbjct: 156 LFLDKKNALIADEVQGRGTVDHTPVYPREVVRRALELNATALILVHNHPSGDPTPSRADI 215 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I TT PL I +HDH+I+GK+ S +GL++I Sbjct: 216 EMTRMIETTAKPLGISLHDHVIVGKNGHASLRGLKLI 252 >gi|323339483|ref|ZP_08079762.1| DNA repair protein RadC [Lactobacillus ruminis ATCC 25644] gi|323093097|gb|EFZ35690.1| DNA repair protein RadC [Lactobacillus ruminis ATCC 25644] Length = 224 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 59/96 (61%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FLD N ++ + +GT++ V+ REI + L LS II+VHNHPSG+ PS+ D++ Sbjct: 128 FLDTKNQVLEQKKIFKGTLNSATVHPREIFKEALRLSTARIIVVHNHPSGDTTPSENDLS 187 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L I + DHII+G +++S + II Sbjct: 188 LTKRLEECGHLLGIELLDHIIVGNSSYLSMREENII 223 >gi|158425828|ref|YP_001527120.1| DNA repair protein RadC [Azorhizobium caulinodans ORS 571] gi|158332717|dbj|BAF90202.1| DNA repair protein [Azorhizobium caulinodans ORS 571] Length = 234 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 62/97 (63%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEV GT+DH PVY RE+V+R LELSA+++IL HNHPSG+P PS ADI Sbjct: 138 LFLDKRNQLIADEVVQTGTVDHAPVYPREVVKRALELSASALILCHNHPSGDPTPSRADI 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ II PL I +HDHII+GK+ S KGLR+I Sbjct: 198 DMTRKIIDVAKPLGIELHDHIIVGKEGHASLKGLRLI 234 >gi|56421153|ref|YP_148471.1| DNA repair protein RadC [Geobacillus kaustophilus HTA426] gi|73913735|sp|Q5KWN3|Y2618_GEOKA RecName: Full=UPF0758 protein GK2618 gi|56380995|dbj|BAD76903.1| DNA repair protein [Geobacillus kaustophilus HTA426] Length = 226 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + G+++ V+ RE+ + ++ SA S+I VHNHPSG+P PS DI Sbjct: 130 IYLNTKNQVIYRKTVFIGSLNASIVHPREVFKEAIKRSAASVICVHNHPSGDPTPSREDI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DH+IIG F+S K + Sbjct: 190 DVTKRLAECGRIIGIELLDHLIIGDQKFISLKEKGYV 226 >gi|319897558|ref|YP_004135755.1| DNA repair protein radc homolog [Haemophilus influenzae F3031] gi|88930441|sp|Q4QLV5|Y1125_HAEI8 RecName: Full=UPF0758 protein NTHI1125 gi|317433064|emb|CBY81438.1| DNA repair protein RadC homolog [Haemophilus influenzae F3031] Length = 221 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 185 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 221 >gi|301021305|ref|ZP_07185334.1| putative DNA repair protein RadC [Escherichia coli MS 69-1] gi|300398156|gb|EFJ81694.1| putative DNA repair protein RadC [Escherichia coli MS 69-1] Length = 157 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+ E GTI+ V+ REIV+ L +A ++IL HNHPSG PS AD Sbjct: 61 LYLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVTEPSRADR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T NI+ TL+ + + V DH IIG +SF + Sbjct: 121 LITTNIVKTLDLVKVRVLDHFIIGAGDVLSFAERGWL 157 >gi|206969519|ref|ZP_03230473.1| DNA repair protein RadC [Bacillus cereus AH1134] gi|228941621|ref|ZP_04104168.1| DNA repair protein radC [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228954737|ref|ZP_04116759.1| DNA repair protein radC [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228974550|ref|ZP_04135116.1| DNA repair protein radC [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981145|ref|ZP_04141445.1| DNA repair protein radC [Bacillus thuringiensis Bt407] gi|229071963|ref|ZP_04205173.1| DNA repair protein radC [Bacillus cereus F65185] gi|229081719|ref|ZP_04214212.1| DNA repair protein radC [Bacillus cereus Rock4-2] gi|229180730|ref|ZP_04308068.1| DNA repair protein radC [Bacillus cereus 172560W] gi|229192665|ref|ZP_04319624.1| DNA repair protein radC [Bacillus cereus ATCC 10876] gi|206735207|gb|EDZ52375.1| DNA repair protein RadC [Bacillus cereus AH1134] gi|228590755|gb|EEK48615.1| DNA repair protein radC [Bacillus cereus ATCC 10876] gi|228602708|gb|EEK60191.1| DNA repair protein radC [Bacillus cereus 172560W] gi|228701564|gb|EEL54057.1| DNA repair protein radC [Bacillus cereus Rock4-2] gi|228711122|gb|EEL63087.1| DNA repair protein radC [Bacillus cereus F65185] gi|228778345|gb|EEM26612.1| DNA repair protein radC [Bacillus thuringiensis Bt407] gi|228784953|gb|EEM32966.1| DNA repair protein radC [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228804935|gb|EEM51532.1| DNA repair protein radC [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228817833|gb|EEM63911.1| DNA repair protein radC [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942233|gb|AEA18129.1| DNA repair protein radC [Bacillus thuringiensis serovar chinensis CT-43] Length = 225 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|301631360|ref|XP_002944759.1| PREDICTED: UPF0758 protein Veis_1654-like [Xenopus (Silurana) tropicalis] Length = 225 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N L+A E RGT+ VY RE+VQR L AT+++L HNHPSG+ PS AD Sbjct: 129 LFLDSQNRLLAMEELFRGTLTQTSVYPREVVQRALHHQATAVVLAHNHPSGSVQPSRADE 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH+I+ +S ++ Sbjct: 189 ALTQTLKAALALIDVRVLDHVIVAPGQALSMAEQGLV 225 >gi|34498534|ref|NP_902749.1| DNA repair protein RadC [Chromobacterium violaceum ATCC 12472] gi|81654991|sp|Q7NTH5|Y3079_CHRVO RecName: Full=UPF0758 protein CV_3079 gi|34104390|gb|AAQ60748.1| DNA repair protein RadC [Chromobacterium violaceum ATCC 12472] Length = 224 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL N LI E +GT+ VY RE+++R L +A ++I+ HNHPSG PS AD Sbjct: 128 IFLSAQNRLIEVEEVFKGTLTETRVYPREVLRRALRHNAAALIIAHNHPSGVSEPSSADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L ++I + DH ++ SF + Sbjct: 188 VLTDTLKRALELVDIRLLDHFVVTGGHAESFAERGWL 224 >gi|331650414|ref|ZP_08351486.1| putative DNA repair protein [Escherichia coli M605] gi|331040808|gb|EGI12966.1| putative DNA repair protein [Escherichia coli M605] Length = 157 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+ E GTI+ V+ REIV+ L +A ++IL HNHPSG PS AD Sbjct: 61 LYLDNQNRLLKHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T NI+ TL+ + + V DH IIG +SF + Sbjct: 121 LITTNIVKTLDLVKVRVLDHFIIGAGDVLSFAERGWL 157 >gi|253702454|ref|YP_003023643.1| DNA repair protein RadC [Geobacter sp. M21] gi|251777304|gb|ACT19885.1| DNA repair protein RadC [Geobacter sp. M21] Length = 231 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N +I+ S G+++ V+ RE+ + SA ++IL+HNHP+G+P PS D+ Sbjct: 135 LLLDGKNRIISRAQISEGSLNQSIVHPREVFNVAVRNSAAAMILLHNHPTGDPAPSPEDM 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I V DHIIIG++ F SF + Sbjct: 195 EVTRRLCEAGQLLGIRVLDHIIIGENEFYSFAEHGRL 231 >gi|291485217|dbj|BAI86292.1| DNA repair protein RadC [Bacillus subtilis subsp. natto BEST195] Length = 231 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I G+++ V+ RE+ + + SA S I VHNHPSG+P PS DI Sbjct: 135 LYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + N + I + DH++IG FVS K + Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231 >gi|296331651|ref|ZP_06874120.1| DNA repair protein RadC [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675390|ref|YP_003867062.1| putative DNA repair protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296151246|gb|EFG92126.1| DNA repair protein RadC [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413634|gb|ADM38753.1| putative DNA repair protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 231 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I G+++ V+ RE+ + + SA S I VHNHPSG+P PS DI Sbjct: 135 LYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + N + I + DH++IG FVS K + Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231 >gi|317050107|ref|YP_004117755.1| DNA repair protein RadC [Pantoea sp. At-9b] gi|316951724|gb|ADU71199.1| DNA repair protein RadC [Pantoea sp. At-9b] Length = 218 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ + G+I+ V V+ REIV+ L+L+A ++IL HNHPSG PS AD Sbjct: 122 LFLDNQHHVLQAQKMFSGSINSVEVHPREIVREALKLNAAAVILAHNHPSGVAEPSRADR 181 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I + +NI + DH++IG F SF + Sbjct: 182 EITDKISKACSLMNIRLLDHLVIGHGEFTSFAERGWL 218 >gi|319783917|ref|YP_004143393.1| DNA repair protein RadC [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169805|gb|ADV13343.1| DNA repair protein RadC [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 253 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 64/97 (65%), Positives = 74/97 (76%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+++R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 157 LFLDKKNALIADEVQQTGTVDHTPVYPREVIKRALELSATAIILVHNHPSGDPTPSRADI 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ II L I VHDHIIIG+ + S KGL +I Sbjct: 217 EMTKEIIDAGKRLGIAVHDHIIIGRKGYASMKGLLLI 253 >gi|110680841|ref|YP_683848.1| DNA repair protein RadC [Roseobacter denitrificans OCh 114] gi|109456957|gb|ABG33162.1| DNA repair protein RadC [Roseobacter denitrificans OCh 114] Length = 301 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 52/97 (53%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N++IADE Q++GT+DHVPVY RE+ +R LEL+A++IILVHNHPSG+P+PS DI Sbjct: 204 LFLDRKNVIIADEEQAKGTVDHVPVYPREVAKRALELNASAIILVHNHPSGDPSPSTQDI 263 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + + + + +HDH+IIGK+ SFK + Sbjct: 264 TMTDQVSSACLAIGVTIHDHVIIGKEREFSFKEGGYL 300 >gi|294501407|ref|YP_003565107.1| DNA repair protein RadC [Bacillus megaterium QM B1551] gi|295706755|ref|YP_003599830.1| DNA repair protein RadC [Bacillus megaterium DSM 319] gi|294351344|gb|ADE71673.1| DNA repair protein RadC [Bacillus megaterium QM B1551] gi|294804414|gb|ADF41480.1| DNA repair protein RadC [Bacillus megaterium DSM 319] Length = 228 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ + G+++ V+ RE+ + SA S+I +HNHPSG+P PS DI Sbjct: 132 LYLNTKNQVLHKQTIFIGSLNSSIVHPREVFKEAFRRSAASLICIHNHPSGDPTPSREDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I + DH+IIG ++S K + Sbjct: 192 EVTKRLKECGFIIGIELLDHLIIGDRKYISLKEKGYM 228 >gi|294340312|emb|CAZ88693.1| DNA repair protein radC [Thiomonas sp. 3As] Length = 226 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E SRGT+ VY RE+V+ L L+A ++IL HNHPSG PS AD Sbjct: 130 LFLDSQHQLIASEELSRGTLASTSVYPREVVKAALRLNAGALILAHNHPSGLAEPSAADR 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + L +++ V DH+++ + + VSF ++ Sbjct: 190 ALTQTLKSALALVDVRVLDHLVVTRHSVVSFAERGLL 226 >gi|83941929|ref|ZP_00954391.1| DNA repair protein RadC [Sulfitobacter sp. EE-36] gi|83847749|gb|EAP85624.1| DNA repair protein RadC [Sulfitobacter sp. EE-36] Length = 253 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 51/97 (52%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD+ N++I DE Q +GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS ADI Sbjct: 157 IYLDRKNVVIGDEEQGKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQADI 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MTQ I + L + +HDH+IIGK +SF+ + Sbjct: 217 DMTQQIFAACSALGLTLHDHLIIGKSRELSFRSEGYL 253 >gi|330824402|ref|YP_004387705.1| DNA repair protein RadC [Alicycliphilus denitrificans K601] gi|329309774|gb|AEB84189.1| DNA repair protein RadC [Alicycliphilus denitrificans K601] Length = 164 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E +GT+D VY R +VQR L L+A+++IL H HPSGN PS AD Sbjct: 68 VFLDNQHQVLAFEPLFKGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L ++ V DH I+GK + SF ++ Sbjct: 128 AITERLKSALATVDARVLDHFIVGKGSPYSFAEAGLL 164 >gi|218709645|ref|YP_002417266.1| putative DNA repair protein; prophage protein [Vibrio splendidus LGP32] gi|218322664|emb|CAV18840.1| putative DNA repair protein; prophage protein [Vibrio splendidus LGP32] Length = 156 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + LI E +GTID VY RE+V+ L+ +A ++I HNHPSG+ PS AD Sbjct: 61 MLLDNQHRLIEFEELFQGTIDAASVYPREVVKTALKANAAAVIFAHNHPSGDSAPSQADR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DH+++G + SF + Sbjct: 121 RITTRLQDALALIDVRVLDHVVVG-EQCTSFAERGWL 156 >gi|188025517|ref|ZP_02997537.1| hypothetical protein PROSTU_00686 [Providencia stuartii ATCC 25827] gi|188025584|ref|ZP_02997572.1| hypothetical protein PROSTU_00936 [Providencia stuartii ATCC 25827] gi|282600132|ref|ZP_05973133.2| DNA repair protein RadC [Providencia rustigianii DSM 4541] gi|188022915|gb|EDU60955.1| hypothetical protein PROSTU_00936 [Providencia stuartii ATCC 25827] gi|188023263|gb|EDU61303.1| hypothetical protein PROSTU_00686 [Providencia stuartii ATCC 25827] gi|282566538|gb|EFB72073.1| DNA repair protein RadC [Providencia rustigianii DSM 4541] Length = 166 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ N LI+ E G+I VY RE+V+R L +A ++I HNHPSG+ PS AD Sbjct: 70 LYLNQQNQLISSETLFAGSISSTQVYPREVVKRALHFNAAAVIFAHNHPSGDITPSQADK 129 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ +I L + + V DH+IIG SF ++ Sbjct: 130 SITQQLIKALQLIEVRVLDHLIIGGQQIFSFAEHGLV 166 >gi|262151185|ref|ZP_06028323.1| DNA repair protein RadC [Vibrio cholerae INDRE 91/1] gi|220897838|dbj|BAH11100.1| DNA repair protein RadC-related protein [Vibrio cholerae O1 biovar El tor] gi|262031016|gb|EEY49642.1| DNA repair protein RadC [Vibrio cholerae INDRE 91/1] Length = 157 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157 >gi|329891298|ref|ZP_08269641.1| DNA repair protein RadC family protein [Brevundimonas diminuta ATCC 11568] gi|328846599|gb|EGF96163.1| DNA repair protein RadC family protein [Brevundimonas diminuta ATCC 11568] Length = 243 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LDK N LI DE+Q+RGT+DH PVY RE+V+R LELSA+++I+VHNHPSG+P PS ADI Sbjct: 147 LYLDKKNQLILDEIQNRGTVDHAPVYPREVVRRALELSASAMIIVHNHPSGDPTPSRADI 206 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ +I L++ VHDH+I+G++ SFK L ++ Sbjct: 207 DMTKQVIEAARALSVQVHDHLIVGREGVASFKQLGLM 243 >gi|160914215|ref|ZP_02076436.1| hypothetical protein EUBDOL_00225 [Eubacterium dolichum DSM 3991] gi|158433842|gb|EDP12131.1| hypothetical protein EUBDOL_00225 [Eubacterium dolichum DSM 3991] Length = 227 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ N ++A + GT+ V+ REI + + + II HNHPSGNP SDADI Sbjct: 128 VFLNQRNQILAYKTLFVGTLTSANVHPREIFKEAMRIGCAKIICAHNHPSGNPQVSDADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I+ ++I + DHI++G + +VS + + Sbjct: 188 AITQQIMECGQLVSIPLLDHIVVGGNRYVSLREEGYM 224 >gi|327395780|dbj|BAK13202.1| DNA repair protein RadC RadC [Pantoea ananatis AJ13355] Length = 228 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I G+I+ V V+ REIV+ L+++A ++I+ HNHPSG PS AD Sbjct: 132 MFLDNQHRVITARQMFSGSINSVEVHPREIVREALKINAAALIIAHNHPSGRAEPSQADR 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I +NI V DH++IG+ VSF + Sbjct: 192 DITVKICEACRLVNIRVLDHLVIGRGESVSFTERGWL 228 >gi|300361445|ref|ZP_07057622.1| DNA repair protein RadC [Lactobacillus gasseri JV-V03] gi|300354064|gb|EFJ69935.1| DNA repair protein RadC [Lactobacillus gasseri JV-V03] Length = 206 Score = 130 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +IA+++ +GT++ + R+I + + ++T+ + HNHPSG+ PS D+ Sbjct: 110 IYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDL 169 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ + I DH I+ + ++SF+ + ++ Sbjct: 170 RFTKKLVEASKCMGIDFLDHFIVTDNTYLSFREMELL 206 >gi|42783591|ref|NP_980838.1| DNA repair protein RadC [Bacillus cereus ATCC 10987] gi|54036227|sp|Q72ZX2|Y4545_BACC1 RecName: Full=UPF0758 protein BCE_4545 gi|42739520|gb|AAS43446.1| DNA repair protein RadC [Bacillus cereus ATCC 10987] Length = 225 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|258514688|ref|YP_003190910.1| DNA repair protein RadC [Desulfotomaculum acetoxidans DSM 771] gi|257778393|gb|ACV62287.1| DNA repair protein RadC [Desulfotomaculum acetoxidans DSM 771] Length = 227 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I+ E S GT++ V+ RE+ + ++ SA +IIL+HNHPSG+P PS DI Sbjct: 131 LLLNTKNRVISLEAISVGTLNSSNVHPRELFKVAIKRSAAAIILIHNHPSGDPTPSREDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ + + I V DHI+IG FVS K + Sbjct: 191 DVTERLGEAGKIVGIDVLDHIVIGDGKFVSLKAKGL 226 >gi|84514871|ref|ZP_01002234.1| DNA repair protein RadC [Loktanella vestfoldensis SKA53] gi|84511030|gb|EAQ07484.1| DNA repair protein RadC [Loktanella vestfoldensis SKA53] Length = 220 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 56/96 (58%), Positives = 71/96 (73%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N+LIADE Q++GT+DHVPVY RE+V+R LEL+A S+ILVHNHPSG+P PS ADI Sbjct: 124 LFLDTKNVLIADEEQAKGTLDHVPVYPREVVKRALELNAASMILVHNHPSGDPTPSQADI 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 MT+ I + I VHDH+IIGK +S + + Sbjct: 184 TMTRQISDAAGTMGITVHDHLIIGKSCEISLRAQGL 219 >gi|251771587|gb|EES52163.1| DNA repair protein RadC [Leptospirillum ferrodiazotrophum] Length = 232 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + L E S GT+ PV+ RE + SA+++I VHNHPSG+P PS D Sbjct: 133 LLLDTRHRLRRMEKISEGTLAMTPVHPREAFSPAVRESASAVIFVHNHPSGDPEPSPEDW 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 ++T ++ L I V DHI+IG A+VS + Sbjct: 193 SLTTRLVECGTLLGIRVLDHIVIGDHAYVSLRERG 227 >gi|330807440|ref|YP_004351902.1| Putative DNA repair protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375548|gb|AEA66898.1| Putative DNA repair protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 165 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGT+D VY RE+V+ LE +A ++ILVHNHPSG+P PS AD Sbjct: 69 LMLDAKHRVIGFRELFRGTLDGASVYPREVVKIALEHNAAAVILVHNHPSGDPEPSQADY 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + LN + + DH+++G D VS + Sbjct: 129 ALTTTLKNALNMVGTRILDHVVVGHDGCVSLAERGYL 165 >gi|297529218|ref|YP_003670493.1| DNA repair protein RadC [Geobacillus sp. C56-T3] gi|297252470|gb|ADI25916.1| DNA repair protein RadC [Geobacillus sp. C56-T3] Length = 226 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + G+++ V+ RE+ + ++ SA S+I VHNHPSG+P PS DI Sbjct: 130 IYLNTKNQVIYRKTVFIGSLNASIVHPREVFKEAIKRSAASVICVHNHPSGDPTPSREDI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DH+IIG F+S K + Sbjct: 190 DVTKRLAECGRIIGIELLDHLIIGDQKFISLKEKGYV 226 >gi|238798215|ref|ZP_04641701.1| DNA repair protein, RadC family [Yersinia mollaretii ATCC 43969] gi|238717952|gb|EEQ09782.1| DNA repair protein, RadC family [Yersinia mollaretii ATCC 43969] Length = 157 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+A E S GT + VY RE+V R L ++++ HNHP+G+P PS AD Sbjct: 59 LFLDNRHRLMASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADR 118 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ LN ++I V DH+IIG+ VS L + Sbjct: 119 TLTARLVNALNMVDIRVLDHLIIGESEPVSLAELGWL 155 >gi|229163410|ref|ZP_04291361.1| DNA repair protein radC [Bacillus cereus R309803] gi|228619979|gb|EEK76854.1| DNA repair protein radC [Bacillus cereus R309803] Length = 225 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|152984586|ref|YP_001351411.1| DNA repair protein RadC [Pseudomonas aeruginosa PA7] gi|166218788|sp|A6VEC6|Y6095_PSEA7 RecName: Full=UPF0758 protein PSPA7_6095 gi|150959744|gb|ABR81769.1| DNA repair protein RadC [Pseudomonas aeruginosa PA7] Length = 224 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A EV +G+ID VY R++V+R L +A ++IL HNHPSG+ PS AD Sbjct: 128 LFLDTRHRVLAFEVLFQGSIDGASVYPRQVVKRALAHNAAALILTHNHPSGDARPSLADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DH IIG +S + Sbjct: 188 QLTARLKEALALIDVRVLDHFIIGDGEPLSLAEYGWM 224 >gi|331005821|ref|ZP_08329177.1| DNA repair protein [gamma proteobacterium IMCC1989] gi|330420360|gb|EGG94670.1| DNA repair protein [gamma proteobacterium IMCC1989] Length = 169 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + +I E+ GTID VY RE+V+ L+ +A +IIL HNHPSG+P PS AD Sbjct: 73 IYLDSQHGIIDFEILFHGTIDAASVYPREVVKSALKYNAAAIILAHNHPSGSPEPSSADK 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T IIT L ++I V DH+I+G +SF L ++ Sbjct: 133 RITDQIITALKTVDIRVLDHLIVGGTQSISFAELGLL 169 >gi|324328357|gb|ADY23617.1| hypothetical protein YBT020_21945 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 225 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|227883870|ref|ZP_04001675.1| DNA repair protein RadC [Escherichia coli 83972] gi|300984866|ref|ZP_07177154.1| putative DNA repair protein RadC [Escherichia coli MS 45-1] gi|307312940|ref|ZP_07592568.1| DNA repair protein RadC [Escherichia coli W] gi|227839148|gb|EEJ49614.1| DNA repair protein RadC [Escherichia coli 83972] gi|300408295|gb|EFJ91833.1| putative DNA repair protein RadC [Escherichia coli MS 45-1] gi|306907108|gb|EFN37615.1| DNA repair protein RadC [Escherichia coli W] gi|307555795|gb|ADN48570.1| conserved phage-associated protein [Escherichia coli ABU 83972] gi|315063591|gb|ADT77918.1| DNA Repair Protein [Escherichia coli W] gi|315292951|gb|EFU52303.1| putative DNA repair protein RadC [Escherichia coli MS 153-1] gi|323380328|gb|ADX52596.1| DNA repair protein RadC [Escherichia coli KO11] Length = 157 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+ E GTI+ V+ REIV+ L +A ++IL HNHPSG PS AD Sbjct: 61 LYLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T NI+ TL+ + + V DH IIG +SF + Sbjct: 121 LITTNIVKTLDLVKVRVLDHFIIGAGDVLSFAERGWL 157 >gi|116050520|ref|YP_790661.1| RadC-like protein [Pseudomonas aeruginosa UCBPP-PA14] gi|115585741|gb|ABJ11756.1| RadC-like protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 168 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI GTID V+ RE+V++ L L+A ++I+ HNHPSGNP PS AD Sbjct: 72 LFLDTRHRLIDYVEMFHGTIDAAEVHPREVVKQALRLNAAAVIVSHNHPSGNPEPSAADR 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + L +++ DHII+ SF +I Sbjct: 132 AMTAQLRQALALVDVRTLDHIIVAGTRTTSFAECGLI 168 >gi|304320238|ref|YP_003853881.1| DNA repair protein RadC [Parvularcula bermudensis HTCC2503] gi|303299140|gb|ADM08739.1| DNA repair protein RadC [Parvularcula bermudensis HTCC2503] Length = 245 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 69/97 (71%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N+LIADEV GT++ PVY RE+V+R L L A+++IL+HNHPSG+P PS ADI Sbjct: 149 LYLNAKNVLIADEVHGSGTVNQTPVYPREVVKRALHLDASALILIHNHPSGDPTPSTADI 208 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ + + VHDH++IG++ SFK L ++ Sbjct: 209 KVTAQLVAAAATVGVTVHDHLVIGREGHASFKSLGLL 245 >gi|30264522|ref|NP_846899.1| DNA repair protein RadC [Bacillus anthracis str. Ames] gi|47529985|ref|YP_021333.1| DNA repair protein RadC [Bacillus anthracis str. 'Ames Ancestor'] gi|49187346|ref|YP_030598.1| DNA repair protein RadC [Bacillus anthracis str. Sterne] gi|49478639|ref|YP_038504.1| DNA repair protein RadC [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65321823|ref|ZP_00394782.1| COG2003: DNA repair proteins [Bacillus anthracis str. A2012] gi|165872011|ref|ZP_02216652.1| DNA repair protein RadC [Bacillus anthracis str. A0488] gi|167636192|ref|ZP_02394496.1| DNA repair protein RadC [Bacillus anthracis str. A0442] gi|167640700|ref|ZP_02398960.1| DNA repair protein RadC [Bacillus anthracis str. A0193] gi|170688713|ref|ZP_02879918.1| DNA repair protein RadC [Bacillus anthracis str. A0465] gi|170708383|ref|ZP_02898827.1| DNA repair protein RadC [Bacillus anthracis str. A0389] gi|177653967|ref|ZP_02936008.1| DNA repair protein RadC [Bacillus anthracis str. A0174] gi|190566980|ref|ZP_03019896.1| DNA repair protein RadC [Bacillus anthracis Tsiankovskii-I] gi|225866435|ref|YP_002751813.1| DNA repair protein RadC [Bacillus cereus 03BB102] gi|227817234|ref|YP_002817243.1| DNA repair protein RadC [Bacillus anthracis str. CDC 684] gi|228917092|ref|ZP_04080650.1| DNA repair protein radC [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228948168|ref|ZP_04110452.1| DNA repair protein radC [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229123994|ref|ZP_04253186.1| DNA repair protein radC [Bacillus cereus 95/8201] gi|229601494|ref|YP_002868738.1| DNA repair protein RadC [Bacillus anthracis str. A0248] gi|254687056|ref|ZP_05150914.1| DNA repair protein RadC [Bacillus anthracis str. CNEVA-9066] gi|254724618|ref|ZP_05186401.1| DNA repair protein RadC [Bacillus anthracis str. A1055] gi|254736558|ref|ZP_05194264.1| DNA repair protein RadC [Bacillus anthracis str. Western North America USA6153] gi|254741596|ref|ZP_05199283.1| DNA repair protein RadC [Bacillus anthracis str. Kruger B] gi|254754806|ref|ZP_05206841.1| DNA repair protein RadC [Bacillus anthracis str. Vollum] gi|254757638|ref|ZP_05209665.1| DNA repair protein RadC [Bacillus anthracis str. Australia 94] gi|301055961|ref|YP_003794172.1| DNA repair protein [Bacillus anthracis CI] gi|33301484|sp|Q81LD7|Y4685_BACAN RecName: Full=UPF0758 protein BA_4685/GBAA_4685/BAS4351 gi|54036223|sp|Q6HD72|Y4187_BACHK RecName: Full=UPF0758 protein BT9727_4187 gi|254764425|sp|C3P9D9|Y4704_BACAA RecName: Full=UPF0758 protein BAA_4704 gi|254764426|sp|C3L6Y5|Y4721_BACAC RecName: Full=UPF0758 protein BAMEG_4721 gi|254764427|sp|C1ETQ0|Y4566_BACC3 RecName: Full=UPF0758 protein BCA_4566 gi|30259180|gb|AAP28385.1| DNA repair protein RadC [Bacillus anthracis str. Ames] gi|47505133|gb|AAT33809.1| DNA repair protein RadC [Bacillus anthracis str. 'Ames Ancestor'] gi|49181273|gb|AAT56649.1| DNA repair protein RadC [Bacillus anthracis str. Sterne] gi|49330195|gb|AAT60841.1| DNA repair protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164712301|gb|EDR17837.1| DNA repair protein RadC [Bacillus anthracis str. A0488] gi|167511272|gb|EDR86658.1| DNA repair protein RadC [Bacillus anthracis str. A0193] gi|167528413|gb|EDR91181.1| DNA repair protein RadC [Bacillus anthracis str. A0442] gi|170126758|gb|EDS95641.1| DNA repair protein RadC [Bacillus anthracis str. A0389] gi|170667399|gb|EDT18157.1| DNA repair protein RadC [Bacillus anthracis str. A0465] gi|172081022|gb|EDT66100.1| DNA repair protein RadC [Bacillus anthracis str. A0174] gi|190561971|gb|EDV15940.1| DNA repair protein RadC [Bacillus anthracis Tsiankovskii-I] gi|225786937|gb|ACO27154.1| DNA repair protein RadC [Bacillus cereus 03BB102] gi|227003430|gb|ACP13173.1| DNA repair protein RadC [Bacillus anthracis str. CDC 684] gi|228659296|gb|EEL14944.1| DNA repair protein radC [Bacillus cereus 95/8201] gi|228811526|gb|EEM57863.1| DNA repair protein radC [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228842510|gb|EEM87600.1| DNA repair protein radC [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265902|gb|ACQ47539.1| DNA repair protein RadC [Bacillus anthracis str. A0248] gi|300378130|gb|ADK07034.1| DNA repair protein [Bacillus cereus biovar anthracis str. CI] Length = 225 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|307129553|ref|YP_003881569.1| DNA repair protein RadC [Dickeya dadantii 3937] gi|306527082|gb|ADM97012.1| DNA repair protein RadC [Dickeya dadantii 3937] Length = 203 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL + LI GT+ VY REIV++ L +A ++IL HNHPSGN PS AD+ Sbjct: 107 LFLTTRHRLIEYAELFYGTLATTAVYPREIVRKALSCNAAAVILAHNHPSGNTEPSQADL 166 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DHII+G + +SF ++ Sbjct: 167 MLTRRVSAALALVDVRVLDHIIVGGNDTLSFAERALL 203 >gi|90023318|ref|YP_529145.1| DEAD/DEAH box helicase-like protein [Saccharophagus degradans 2-40] gi|122995779|sp|Q21EE6|Y3678_SACD2 RecName: Full=UPF0758 protein Sde_3678 gi|89952918|gb|ABD82933.1| DNA repair protein RadC [Saccharophagus degradans 2-40] Length = 224 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N LI GTID VY RE+V+ L +A ++IL HNHPSG PS+ D Sbjct: 128 ILLNTQNQLIKFVELFNGTIDSASVYPREVVKTALSHNAAAVILAHNHPSGIAEPSEPDK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I DH+++G VSF I Sbjct: 188 AITKRLQQALQLVDIRTLDHLVVGDTEAVSFAERGWI 224 >gi|319651725|ref|ZP_08005851.1| DNA repair protein RadC [Bacillus sp. 2_A_57_CT2] gi|317396544|gb|EFV77256.1| DNA repair protein RadC [Bacillus sp. 2_A_57_CT2] Length = 229 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ + G+++ V+ RE+ + SA SII +HNHPSG+P PS DI Sbjct: 133 LYLNTKNQVLHKKTIFIGSLNASIVHPREVFKEAFRRSAASIICIHNHPSGDPTPSREDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + I V DH+IIG++ FVS K + Sbjct: 193 EVTKRLAESGKIIGIEVLDHLIIGENKFVSLKEKGYL 229 >gi|239827887|ref|YP_002950511.1| DNA repair protein RadC [Geobacillus sp. WCH70] gi|259551864|sp|C5D5H7|Y2550_GEOSW RecName: Full=UPF0758 protein GWCH70_2550 gi|239808180|gb|ACS25245.1| DNA repair protein RadC [Geobacillus sp. WCH70] Length = 226 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + G+++ V+ RE+ + ++ SA SII VHNHPSG+P PS DI Sbjct: 130 IYLNTKNQVIHRKTIFIGSLNASIVHPREVFKEAIKRSAASIICVHNHPSGDPTPSREDI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DH+IIG FVS K + Sbjct: 190 DVTKRLAECGRIIGIELLDHLIIGDQKFVSLKEKGYV 226 >gi|312882919|ref|ZP_07742651.1| DNA repair protein RadC [Vibrio caribbenthicus ATCC BAA-2122] gi|309369438|gb|EFP96958.1| DNA repair protein RadC [Vibrio caribbenthicus ATCC BAA-2122] Length = 224 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +++ E GTID VY RE+V+R LE++A +IIL HNHPSG PS +D Sbjct: 128 IFLDSQHRVLSCESLFFGTIDCASVYPREVVKRSLEMNAAAIILAHNHPSGVAEPSQSDR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ + ++I V DH ++G FVSF I Sbjct: 188 RITRKIVDAMGLVDIRVLDHFVVGDGEFVSFAERGWI 224 >gi|229105092|ref|ZP_04235743.1| DNA repair protein radC [Bacillus cereus Rock3-28] gi|228678273|gb|EEL32499.1| DNA repair protein radC [Bacillus cereus Rock3-28] Length = 225 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|90415484|ref|ZP_01223418.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2207] gi|90332807|gb|EAS47977.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2207] Length = 217 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI +GT+D V+ RE+V R L +A ++I+ HNHPSG PS ADI Sbjct: 121 LLLDSKHQLIDTHELFQGTVDAASVHPREVVARALRKNAAAVIVAHNHPSGLAEPSQADI 180 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + LN + I + DH+IIG+ VS + Sbjct: 181 DITRRLKQALNLVEIRLLDHLIIGRGEVVSLAQRGKL 217 >gi|91786850|ref|YP_547802.1| DNA repair protein RadC [Polaromonas sp. JS666] gi|91696075|gb|ABE42904.1| DNA replication and repair protein RadC [Polaromonas sp. JS666] Length = 244 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E RGT+ VY RE+V R L L+A S++L HNHPSG PS AD Sbjct: 148 LFLDSQHRLIALEELFRGTLTQTSVYPREVVVRALALNAASVVLAHNHPSGAATPSRADE 207 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + L +++ V DH ++ VS L ++ Sbjct: 208 ALTQTLKSALALVDVRVLDHFVVTSTQAVSMAELGLL 244 >gi|312598047|gb|ADQ89981.1| DNA-repair protein [Proteus mirabilis] Length = 223 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +I E +GT+D V V+ REI+++ ++ +A SIIL HNHPSG PS AD Sbjct: 127 LFLDNQNQMIDCEEMFKGTVDRVEVHPREIIRQSIKKNAASIILAHNHPSGLSEPSLADK 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I T + I V DH+++G D+ VSF + Sbjct: 187 QITEKIFTACQLVGIKVLDHLVVGHDSCVSFAERGWL 223 >gi|229198583|ref|ZP_04325285.1| DNA repair protein radC [Bacillus cereus m1293] gi|228584865|gb|EEK42981.1| DNA repair protein radC [Bacillus cereus m1293] Length = 225 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|84390134|ref|ZP_00991396.1| DNA repair protein [Vibrio splendidus 12B01] gi|84376788|gb|EAP93663.1| DNA repair protein [Vibrio splendidus 12B01] Length = 157 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + GT+D VY RE+V+ LE++A ++I+ HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIMAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ + SF + Sbjct: 122 RITERLKGALALVDVRVLDH-IVTGETCTSFAERGWL 157 >gi|238790651|ref|ZP_04634415.1| DNA repair protein, RadC family [Yersinia frederiksenii ATCC 33641] gi|238721256|gb|EEQ12932.1| DNA repair protein, RadC family [Yersinia frederiksenii ATCC 33641] Length = 157 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+A E S GT + VY RE+V R L ++++ HNHP+G+P PS AD Sbjct: 59 LYLDNRHRLMASETMSIGTFNATTVYPREVVIRALHHHCAAVVIAHNHPAGDPTPSQADR 118 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ LN ++I V DH+IIG+ VS L + Sbjct: 119 TLTTRLVNALNMVDIRVLDHLIIGESEPVSLAELGWL 155 >gi|121534093|ref|ZP_01665918.1| DNA repair protein RadC [Thermosinus carboxydivorans Nor1] gi|121307196|gb|EAX48113.1| DNA repair protein RadC [Thermosinus carboxydivorans Nor1] Length = 232 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L N ++A V S G+++ V+ RE+ + + SA ++ILVHNHPSG+P PS DI Sbjct: 136 LLLSTKNHVLAMPVISVGSLNASLVHPRELFREAINHSAAAVILVHNHPSGDPTPSREDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L I V DH+IIG +VS K II Sbjct: 196 EITGKMVQAGEILGIAVLDHVIIGDGKYVSLKEKGII 232 >gi|269137424|ref|YP_003294124.1| DNA repair protein [Edwardsiella tarda EIB202] gi|267983084|gb|ACY82913.1| DNA repair protein [Edwardsiella tarda EIB202] gi|304557498|gb|ADM40162.1| DNA repair protein RadC [Edwardsiella tarda FL6-60] Length = 228 Score = 130 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E GTI+ V VY REIV+ L+L+A ++IL HNHPSGNP PS AD Sbjct: 132 LFLDNQHRVIRSEQMFSGTINCVDVYPREIVREALKLNAVALILAHNHPSGNPEPSVADR 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + ++I V DH++IG VSF I Sbjct: 192 LLTERVAKACALVDIQVLDHMVIGHGQRVSFAERGWI 228 >gi|153801495|ref|ZP_01956081.1| DNA repair protein RadC family protein [Vibrio cholerae MZO-3] gi|124122986|gb|EAY41729.1| DNA repair protein RadC family protein [Vibrio cholerae MZO-3] Length = 157 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNRLIEFKDLFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157 >gi|116629851|ref|YP_815023.1| DNA repair protein [Lactobacillus gasseri ATCC 33323] gi|311110510|ref|ZP_07711907.1| DNA repair protein RadC [Lactobacillus gasseri MV-22] gi|116095433|gb|ABJ60585.1| DNA repair protein [Lactobacillus gasseri ATCC 33323] gi|311065664|gb|EFQ46004.1| DNA repair protein RadC [Lactobacillus gasseri MV-22] Length = 206 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +IA+++ +GT++ + R+I + + ++T+ + HNHPSG+ PS D+ Sbjct: 110 IYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDL 169 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ + I DH I+ + ++SF+ + ++ Sbjct: 170 RFTKKLVEASKCMGIDFLDHFIVTDNTYLSFREMELL 206 >gi|54307423|ref|YP_128443.1| DNA repair protein RadC [Photobacterium profundum SS9] gi|54036225|sp|Q6LVN4|Y202_PHOPR RecName: Full=UPF0758 protein PBPRA0202 gi|46911843|emb|CAG18641.1| putative DNA repair protein RadC [Photobacterium profundum SS9] Length = 224 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA EV GTI+ VY REIV+R LE +A ++IL HNHPSG PS +D+ Sbjct: 128 LFLDNQHRVIAGEVLFEGTINSAAVYPREIVKRSLEFNAVALILAHNHPSGVAEPSQSDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L ++I V DH I+G VSF + Sbjct: 188 RITRTISDALALVDIRVLDHFIVGDGEIVSFSEQGWL 224 >gi|52141051|ref|YP_085777.1| DNA repair protein RadC [Bacillus cereus E33L] gi|81686057|sp|Q633Z0|Y4198_BACCZ RecName: Full=UPF0758 protein BCE33L4198 gi|51974520|gb|AAU16070.1| DNA repair protein [Bacillus cereus E33L] Length = 225 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|270265228|ref|ZP_06193490.1| DNA repair protein RadC [Serratia odorifera 4Rx13] gi|270040862|gb|EFA13964.1| DNA repair protein RadC [Serratia odorifera 4Rx13] Length = 228 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I + GTI V V+ REIV+ L+ +A +IIL HNHPSG PS AD Sbjct: 132 LFLDNQHRVIRHQEMFAGTISSVVVHPREIVREALKANAAAIILAHNHPSGKAEPSHADR 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++++ L I V DH++IG+ VSF + Sbjct: 192 LITEHVVNACLLLEIRVLDHLVIGRGECVSFAERGWL 228 >gi|193063615|ref|ZP_03044703.1| DNA repair protein RadC [Escherichia coli E22] gi|192930602|gb|EDV83208.1| DNA repair protein RadC [Escherichia coli E22] Length = 161 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+ E G+++HV V+ RE+V+ L +A +++L HNHPSG+P PS D Sbjct: 65 LYLDNQHRLLESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDR 124 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + L +++ DH+++G+D VSF + Sbjct: 125 NITGRLKEALELVDVKTLDHLVVGRDGIVSFAERGWL 161 >gi|301154718|emb|CBW14181.1| protein associated with replication fork, possible DNA repair protein [Haemophilus parainfluenzae T3T1] Length = 221 Score = 130 bits (328), Expect = 5e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 125 LFLDNQHRLIKKERLFLGTINVTNVYPREIIKESLYCNAAALILAHNHPSGIAEPSYSDK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ II + I + DH I+GK SF ++ Sbjct: 185 MITQKIIEAAELMEIRILDHFIVGKGTCYSFAEHNLL 221 >gi|238756176|ref|ZP_04617495.1| DNA repair protein, RadC family [Yersinia ruckeri ATCC 29473] gi|238705591|gb|EEP97989.1| DNA repair protein, RadC family [Yersinia ruckeri ATCC 29473] Length = 157 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+A E S GT + VY RE+V R L ++++ HNHP+G+P PS AD Sbjct: 59 LFLDNRHRLMASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADR 118 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ LN ++I V DH+IIG+ VS L + Sbjct: 119 TLTARLVNALNMVDIRVLDHLIIGESEPVSLAELGWL 155 >gi|228935773|ref|ZP_04098585.1| DNA repair protein radC [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823830|gb|EEM69650.1| DNA repair protein radC [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 225 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|229186695|ref|ZP_04313854.1| DNA repair protein radC [Bacillus cereus BGSC 6E1] gi|228596798|gb|EEK54459.1| DNA repair protein radC [Bacillus cereus BGSC 6E1] Length = 225 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|291619457|ref|YP_003522199.1| RadC [Pantoea ananatis LMG 20103] gi|291154487|gb|ADD79071.1| RadC [Pantoea ananatis LMG 20103] Length = 228 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I G+I+ V V+ REIV+ L+++A ++I+ HNHPSG PS AD Sbjct: 132 MFLDNQHRVITARQMFSGSINSVEVHPREIVREALKINAAALIIAHNHPSGRAEPSQADR 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I +NI V DH++IG+ VSF + Sbjct: 192 DITVKICEACRLVNIRVLDHLVIGRGESVSFTERGWL 228 >gi|254429147|ref|ZP_05042854.1| DNA repair protein RadC [Alcanivorax sp. DG881] gi|196195316|gb|EDX90275.1| DNA repair protein RadC [Alcanivorax sp. DG881] Length = 164 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ + +++ E GTID VY R +VQ+ L +A ++I HNHPSG PS AD Sbjct: 68 IFLNNKHKVLSFEPLFSGTIDGAAVYPRVVVQQALACNAAAVIFAHNHPSGCCEPSQADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DH ++ + +VS + Sbjct: 128 TITTRLKDALALIDVRVLDHFVVSRSEWVSLAERGWL 164 >gi|330964261|gb|EGH64521.1| hypothetical protein PSYAC_06345 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 224 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ RGTI+ V+ R++V+R L +A S+IL HNHPSG PS +DI Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRALAHNAASLILCHNHPSGITTPSRSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ V DH+I+G +S ++ Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVEKGLM 224 >gi|206975949|ref|ZP_03236859.1| DNA repair protein RadC [Bacillus cereus H3081.97] gi|217961943|ref|YP_002340513.1| DNA repair protein RadC [Bacillus cereus AH187] gi|222097900|ref|YP_002531957.1| DNA repair protein radc [Bacillus cereus Q1] gi|229141192|ref|ZP_04269731.1| DNA repair protein radC [Bacillus cereus BDRD-ST26] gi|226736618|sp|B7HQL1|Y4587_BACC7 RecName: Full=UPF0758 protein BCAH187_A4587 gi|254764428|sp|B9IZ29|Y4241_BACCQ RecName: Full=UPF0758 protein BCQ_4241 gi|206745701|gb|EDZ57098.1| DNA repair protein RadC [Bacillus cereus H3081.97] gi|217065490|gb|ACJ79740.1| DNA repair protein RadC [Bacillus cereus AH187] gi|221241958|gb|ACM14668.1| DNA repair protein [Bacillus cereus Q1] gi|228642233|gb|EEK98525.1| DNA repair protein radC [Bacillus cereus BDRD-ST26] Length = 225 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|229062148|ref|ZP_04199472.1| DNA repair protein radC [Bacillus cereus AH603] gi|228717131|gb|EEL68807.1| DNA repair protein radC [Bacillus cereus AH603] Length = 240 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 144 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 203 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 204 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 240 >gi|229013669|ref|ZP_04170798.1| DNA repair protein radC [Bacillus mycoides DSM 2048] gi|228747591|gb|EEL97465.1| DNA repair protein radC [Bacillus mycoides DSM 2048] Length = 241 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 145 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 204 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 205 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 241 >gi|189423594|ref|YP_001950771.1| DNA repair protein RadC [Geobacter lovleyi SZ] gi|254789653|sp|B3E339|Y523_GEOLS RecName: Full=UPF0758 protein Glov_0523 gi|189419853|gb|ACD94251.1| DNA repair protein RadC [Geobacter lovleyi SZ] Length = 230 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N + S G+++ V+ RE+ + SA ++I +HNHPSG+P PS D Sbjct: 134 LLLDGKNRITRKVQVSEGSLNQSIVHPREVFAPAVRESAAAVIFIHNHPSGDPAPSREDH 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I V DHIIIG A+ SF ++ Sbjct: 194 EITRRLNEAGEILGIKVLDHIIIGDGAYFSFVESGLL 230 >gi|294637895|ref|ZP_06716164.1| DNA repair protein RadC [Edwardsiella tarda ATCC 23685] gi|291088921|gb|EFE21482.1| DNA repair protein RadC [Edwardsiella tarda ATCC 23685] Length = 227 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E GTI+ V VY REIV+ L+L+A ++IL HNHPSGNP PS AD Sbjct: 131 LFLDNQHRVIRSEQMFSGTINCVDVYPREIVREALKLNAVALILAHNHPSGNPEPSVADR 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + ++I V DH++IG VSF I Sbjct: 191 LLTARVAKACALVDIQVLDHMVIGCGQRVSFAERGWI 227 >gi|254482762|ref|ZP_05096000.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2148] gi|214037121|gb|EEB77790.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2148] Length = 193 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ E GT+D VY RE+ R L+ A ++I HNHPSG PS AD Sbjct: 97 IFLDNQHRIMRCEDLFLGTLDGAAVYPREVAVRALQYRAAAVIFAHNHPSGVAEPSSADK 156 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L L+I V DHII+G SF ++ Sbjct: 157 RITERLVAALGLLDIRVLDHIIVGSGCEFSFAEQGLL 193 >gi|91974634|ref|YP_567293.1| DNA repair protein RadC [Rhodopseudomonas palustris BisB5] gi|91681090|gb|ABE37392.1| DNA repair protein RadC [Rhodopseudomonas palustris BisB5] Length = 239 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 62/97 (63%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADE+Q GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI Sbjct: 143 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQADI 202 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I+ PL + VHDHII+GK+ S KGL++I Sbjct: 203 QMTRTIVAIAEPLGVSVHDHIIVGKNGHASLKGLKLI 239 >gi|152998927|ref|YP_001364608.1| DNA repair protein RadC [Shewanella baltica OS185] gi|166218794|sp|A6WIA6|Y376_SHEB8 RecName: Full=UPF0758 protein Shew185_0376 gi|151363545|gb|ABS06545.1| DNA repair protein RadC [Shewanella baltica OS185] Length = 225 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY RE+V LE A ++I+ HNHPSGN PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGNAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|47566644|ref|ZP_00237466.1| DNA repair protein RadC [Bacillus cereus G9241] gi|228987706|ref|ZP_04147817.1| DNA repair protein radC [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|47556674|gb|EAL15006.1| DNA repair protein RadC [Bacillus cereus G9241] gi|228771980|gb|EEM20435.1| DNA repair protein radC [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 225 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|326318501|ref|YP_004236173.1| DNA repair protein RadC [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375337|gb|ADX47606.1| DNA repair protein RadC [Acidovorax avenae subsp. avenae ATCC 19860] Length = 237 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIA E RGT+ VY RE+V R L A +++LVHNHPSG PS AD Sbjct: 141 LFLDSQNGLIAMEEMFRGTLSQASVYPREVVVRALHHHAAAVVLVHNHPSGQVQPSRADE 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ L ++I V DHII+ A +S ++ Sbjct: 201 TLTRSLTDALRLVDIRVLDHIIVAPGASLSMAEEGLL 237 >gi|254477756|ref|ZP_05091142.1| DNA repair protein RadC [Ruegeria sp. R11] gi|214031999|gb|EEB72834.1| DNA repair protein RadC [Ruegeria sp. R11] Length = 251 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADE Q++GT+DHVPVY REI ++ LEL+A+++ILVHNHPSG+P+PS +DI Sbjct: 155 LFLDRKNCLIADEEQAKGTVDHVPVYPREIAKQALELNASALILVHNHPSGDPSPSASDI 214 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I+ L+ L I +HDH+IIGK + +SF+ + Sbjct: 215 AMTDRILQALDALGITLHDHLIIGKSSELSFRSSGYL 251 >gi|330876490|gb|EGH10639.1| hypothetical protein PSYMP_14329 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 224 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ RGTI+ V+ R++V+R L +A S+IL HNHPSG PS +DI Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRALAHNAASLILCHNHPSGITTPSRSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ V DH+I+G +S ++ Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVEKGLM 224 >gi|196034552|ref|ZP_03101961.1| DNA repair protein RadC [Bacillus cereus W] gi|228929500|ref|ZP_04092520.1| DNA repair protein radC [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|195993094|gb|EDX57053.1| DNA repair protein RadC [Bacillus cereus W] gi|228830180|gb|EEM75797.1| DNA repair protein radC [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 225 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|84386431|ref|ZP_00989459.1| DNA repair protein [Vibrio splendidus 12B01] gi|84378855|gb|EAP95710.1| DNA repair protein [Vibrio splendidus 12B01] Length = 158 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + GT+D VY RE+V+ LE++A ++I+ HNHPSG PS AD Sbjct: 63 LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIMAHNHPSGYSTPSQADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ + SF + Sbjct: 123 RITERLKDALALVDVRVLDH-IVTGETCTSFAERGWL 158 >gi|314938909|ref|ZP_07846176.1| DNA repair protein RadC [Enterococcus faecium TX0133a04] gi|314943095|ref|ZP_07849896.1| DNA repair protein RadC [Enterococcus faecium TX0133C] gi|314948108|ref|ZP_07851509.1| DNA repair protein RadC [Enterococcus faecium TX0082] gi|314951626|ref|ZP_07854671.1| DNA repair protein RadC [Enterococcus faecium TX0133A] gi|314993869|ref|ZP_07859203.1| DNA repair protein RadC [Enterococcus faecium TX0133B] gi|314996710|ref|ZP_07861733.1| DNA repair protein RadC [Enterococcus faecium TX0133a01] gi|313589148|gb|EFR67993.1| DNA repair protein RadC [Enterococcus faecium TX0133a01] gi|313591679|gb|EFR70524.1| DNA repair protein RadC [Enterococcus faecium TX0133B] gi|313596222|gb|EFR75067.1| DNA repair protein RadC [Enterococcus faecium TX0133A] gi|313598197|gb|EFR77042.1| DNA repair protein RadC [Enterococcus faecium TX0133C] gi|313641783|gb|EFS06363.1| DNA repair protein RadC [Enterococcus faecium TX0133a04] gi|313645444|gb|EFS10024.1| DNA repair protein RadC [Enterococcus faecium TX0082] Length = 212 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G+++ + REI + A I+L HNHPSGN PS D+ Sbjct: 113 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 172 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N T+ I + I V DH+IIG+ + S + ++ Sbjct: 173 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 209 >gi|297616876|ref|YP_003702035.1| DNA repair protein RadC [Syntrophothermus lipocalidus DSM 12680] gi|297144713|gb|ADI01470.1| DNA repair protein RadC [Syntrophothermus lipocalidus DSM 12680] Length = 229 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD+ N +I+ E S G + V+ RE+ + ++ SA IILVHNHPSG+P+PS DI Sbjct: 133 VYLDRKNQIISIETISIGGLASSIVHPREVFKPAVKKSAAGIILVHNHPSGDPSPSQEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I + DHIIIG ++S +G II Sbjct: 193 EVTRRLVEAGRIIGIEIVDHIIIGDRDYLSMRGRGII 229 >gi|197286970|ref|YP_002152842.1| DNA repair protein [Proteus mirabilis HI4320] gi|194684457|emb|CAR46202.1| DNA repair protein [Proteus mirabilis HI4320] gi|301072223|gb|ADK56077.1| RadC [Proteus mirabilis] gi|301072245|gb|ADK56098.1| RadC [Proteus mirabilis] gi|312598063|gb|ADQ89996.1| DNA-repair protein [Proteus mirabilis] Length = 223 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +I E +GT+D V V+ REI+++ ++ +A SIIL HNHPSG PS AD Sbjct: 127 LFLDNQNQMIDCEEMFKGTVDRVEVHPREIIRQSIKKNAASIILAHNHPSGLSEPSLADK 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I T + I V DH+++G D VSF + Sbjct: 187 QITEKIFTACQLVGIKVLDHLVVGHDNCVSFAERGWL 223 >gi|295399379|ref|ZP_06809361.1| DNA repair protein RadC [Geobacillus thermoglucosidasius C56-YS93] gi|312110061|ref|YP_003988377.1| DNA repair protein RadC [Geobacillus sp. Y4.1MC1] gi|294978845|gb|EFG54441.1| DNA repair protein RadC [Geobacillus thermoglucosidasius C56-YS93] gi|311215162|gb|ADP73766.1| DNA repair protein RadC [Geobacillus sp. Y4.1MC1] Length = 226 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + G+++ V+ RE+ + ++ SA SII HNHPSG+P PS DI Sbjct: 130 IYLNTKNQVIYRKTIFIGSLNASIVHPREVFKEAIKRSAASIICAHNHPSGDPTPSREDI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DH+IIG FVS K + Sbjct: 190 DVTKRLAECGRIIGIELLDHLIIGDQKFVSLKEKGYM 226 >gi|330831605|ref|YP_004394557.1| DNA repair protein RadC [Aeromonas veronii B565] gi|328806741|gb|AEB51940.1| DNA repair protein RadC [Aeromonas veronii B565] Length = 224 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I GTID V+ REIVQ L+ +A ++IL HNHPSG PS AD Sbjct: 128 LLLDNQHRVIQFVELFFGTIDSASVWPREIVQIALKHNAAAVILAHNHPSGVAEPSRADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L ++I V DH++IG VSF + Sbjct: 188 QITDRITAALALIDIRVLDHLVIGDGITVSFAERGWL 224 >gi|229098927|ref|ZP_04229862.1| DNA repair protein radC [Bacillus cereus Rock3-29] gi|228684425|gb|EEL38368.1| DNA repair protein radC [Bacillus cereus Rock3-29] Length = 225 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|256823436|ref|YP_003147399.1| DNA repair protein RadC [Kangiella koreensis DSM 16069] gi|256796975|gb|ACV27631.1| DNA repair protein RadC [Kangiella koreensis DSM 16069] Length = 224 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ + L+A E +GTI+ V+ R +V++ L A ++IL HNHPSG+ PS +D Sbjct: 128 LFLNNQHQLLASETLFQGTINSSEVHPRVVVEKALTYHAAAVILAHNHPSGSLEPSPSDR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I L L+I DHII+ + SF ++ Sbjct: 188 HITDKIQEALGLLDIRTLDHIIVAQGGSYSFAEHGLL 224 >gi|37528674|ref|NP_932019.1| DNA repair protein RadC [Photorhabdus luminescens subsp. laumondii TTO1] gi|54036232|sp|Q7MY28|Y4865_PHOLL RecName: Full=UPF0758 protein plu4865 gi|36788113|emb|CAE17237.1| DNA repair protein [Photorhabdus luminescens subsp. laumondii TTO1] Length = 230 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I E +GTI+ V V+ REIV+ ++++A+S+IL HNHPSG+ PS AD Sbjct: 134 LFLNNQNRVICHEEMFKGTINKVEVHPREIVRSAIKVNASSVILAHNHPSGHAEPSLADK 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I N + + V DH++IG+ VSF I Sbjct: 194 IVTDKVIDACNLVGVKVLDHLVIGRQCCVSFAERGWI 230 >gi|86747826|ref|YP_484322.1| DNA repair protein RadC [Rhodopseudomonas palustris HaA2] gi|123004659|sp|Q2J299|Y700_RHOP2 RecName: Full=UPF0758 protein RPB_0700 gi|86570854|gb|ABD05411.1| DNA repair protein RadC [Rhodopseudomonas palustris HaA2] Length = 250 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 61/96 (63%), Positives = 75/96 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADE+Q GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI Sbjct: 154 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQADI 213 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 MT+ I+ PL + VHDHII+GK+ S KGL++ Sbjct: 214 QMTKTIVAIAEPLGVAVHDHIIVGKNGHASLKGLKL 249 >gi|134095642|ref|YP_001100717.1| DNA repair protein RadC [Herminiimonas arsenicoxydans] gi|166218782|sp|A4G7V9|Y2468_HERAR RecName: Full=UPF0758 protein HEAR2468 gi|133739545|emb|CAL62596.1| DNA repair protein RadC homolog [Herminiimonas arsenicoxydans] Length = 224 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LI + RGT+ H VY REIV+ L +A S+IL HNHPSG P PS AD Sbjct: 128 LFLDVKNRLIVCDEMFRGTLTHTSVYPREIVKAALGHNAASVILAHNHPSGTPEPSAADQ 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH ++ SF + Sbjct: 188 TLTQALKQALMLIDVRVLDHFVVAGKQVYSFAEQGQL 224 >gi|83855405|ref|ZP_00948935.1| DNA repair protein RadC [Sulfitobacter sp. NAS-14.1] gi|83843248|gb|EAP82415.1| DNA repair protein RadC [Sulfitobacter sp. NAS-14.1] Length = 253 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 51/97 (52%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD+ N++I DE Q +GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS ADI Sbjct: 157 IYLDRKNVVIGDEEQGKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQADI 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MTQ I + L + +HDH+IIGK +SF+ + Sbjct: 217 GMTQQIFAACSALGLTLHDHLIIGKSRELSFRSEGYL 253 >gi|218233414|ref|YP_002369261.1| DNA repair protein RadC [Bacillus cereus B4264] gi|228923207|ref|ZP_04086497.1| DNA repair protein radC [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228960730|ref|ZP_04122369.1| DNA repair protein radC [Bacillus thuringiensis serovar pakistani str. T13001] gi|229111925|ref|ZP_04241469.1| DNA repair protein radC [Bacillus cereus Rock1-15] gi|229147024|ref|ZP_04275384.1| DNA repair protein radC [Bacillus cereus BDRD-ST24] gi|229152656|ref|ZP_04280844.1| DNA repair protein radC [Bacillus cereus m1550] gi|296504945|ref|YP_003666645.1| DNA repair protein radC [Bacillus thuringiensis BMB171] gi|226736617|sp|B7HE86|Y4572_BACC4 RecName: Full=UPF0758 protein BCB4264_A4572 gi|218161371|gb|ACK61363.1| DNA repair protein RadC [Bacillus cereus B4264] gi|228630802|gb|EEK87443.1| DNA repair protein radC [Bacillus cereus m1550] gi|228636412|gb|EEK92882.1| DNA repair protein radC [Bacillus cereus BDRD-ST24] gi|228671489|gb|EEL26789.1| DNA repair protein radC [Bacillus cereus Rock1-15] gi|228798946|gb|EEM45921.1| DNA repair protein radC [Bacillus thuringiensis serovar pakistani str. T13001] gi|228836413|gb|EEM81764.1| DNA repair protein radC [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296325997|gb|ADH08925.1| DNA repair protein radC [Bacillus thuringiensis BMB171] Length = 225 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 AVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|149908601|ref|ZP_01897263.1| DNA repair protein RadC [Moritella sp. PE36] gi|149808435|gb|EDM68372.1| DNA repair protein RadC [Moritella sp. PE36] Length = 224 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E GTID VY R +V++ LE +A+++I HNHPSG PS AD Sbjct: 128 LFLDNKHRVIRFEELFYGTIDSASVYPRVVVKKALERNASAVIFAHNHPSGIAEPSHADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I+ L +++ V DH +IG SF + Sbjct: 188 MITDKLISALQLIDVKVLDHFVIGDSEIASFAERGWV 224 >gi|114567770|ref|YP_754924.1| DNA repair proteins [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338705|gb|ABI69553.1| DNA repair proteins [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 206 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ N +++ E S GT+ V+ RE+ + + +A S+ILVHNHPSG+P PS DI Sbjct: 110 ILLNRKNGILSVETISIGTLTSSMVHPREVFKPAIRKNAASVILVHNHPSGDPTPSREDI 169 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + L I V DHIIIG ++ S K + Sbjct: 170 EITKRLSECGQLLGIEVLDHIIIGDGSWNSLKTSGL 205 >gi|148826397|ref|YP_001291150.1| DNA repair protein RadC [Haemophilus influenzae PittEE] gi|148716557|gb|ABQ98767.1| DNA repair protein RadC [Haemophilus influenzae PittEE] Length = 214 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 118 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPSYSDQ 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 178 LITKKIQDAAELMEICVLDHLIVGKSDCYSFAENCLL 214 >gi|90580921|ref|ZP_01236723.1| DNA repair protein RadC [Vibrio angustum S14] gi|90437992|gb|EAS63181.1| DNA repair protein RadC [Vibrio angustum S14] Length = 224 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I EV GTID VY RE+V+R LEL+A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVITGEVLFEGTIDCASVYPREVVKRSLELNAAALILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I +L ++I V DH ++G +SF + Sbjct: 188 RITRKISDSLALVDIRVLDHFVVGDGEIISFTERGWL 224 >gi|172044490|sp|A4STD5|Y4229_AERS4 RecName: Full=UPF0758 protein ASA_4229 Length = 220 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I GT+D V+ REIVQ L+ +A ++IL HNHPSG PS AD Sbjct: 124 LLLDNQHRVIQFVELFYGTLDSASVWPREIVQIALKHNAAAVILAHNHPSGVAEPSRADR 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I+ L ++I V DH++IG VSF + Sbjct: 184 QITDRILAALALIDIRVLDHLVIGDGITVSFAERGWL 220 >gi|319764035|ref|YP_004127972.1| DNA repair protein radc [Alicycliphilus denitrificans BC] gi|330823690|ref|YP_004386993.1| DNA repair protein RadC [Alicycliphilus denitrificans K601] gi|317118596|gb|ADV01085.1| DNA repair protein RadC [Alicycliphilus denitrificans BC] gi|329309062|gb|AEB83477.1| DNA repair protein RadC [Alicycliphilus denitrificans K601] Length = 237 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIA E RGT+ VY RE+V R L A +++L HNHPSG+ PS AD Sbjct: 141 LFLDGQNRLIAMEELFRGTLTQTSVYPREVVLRALHHHAAAVVLAHNHPSGSVQPSRADE 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH+I+ A +S ++ Sbjct: 201 ALTQTLKAALALVDVRVLDHVIVAPGAALSMAEQGLV 237 >gi|297580642|ref|ZP_06942568.1| DNA repair protein RadC family protein [Vibrio cholerae RC385] gi|297535058|gb|EFH73893.1| DNA repair protein RadC family protein [Vibrio cholerae RC385] Length = 157 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI + +GT+D VY RE+V+ LE++A ++I HNHPSG+ PS AD Sbjct: 62 LLLDNQNCLIEFKELFQGTVDAASVYPREVVKAVLEINAAAVIFAHNHPSGDSTPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+ D SF + Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157 >gi|226945653|ref|YP_002800726.1| DNA repair protein RadC-like protein [Azotobacter vinelandii DJ] gi|226720580|gb|ACO79751.1| DNA repair protein RadC-like protein [Azotobacter vinelandii DJ] Length = 168 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI GTID V+ RE+V++ L ++A ++I+ HNHPSGNP PS AD Sbjct: 72 LFLDTRHRLIDYVEMFHGTIDAAEVHPREVVKQALRVNAAAVIVSHNHPSGNPEPSGADR 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH+I+ SF ++ Sbjct: 132 ALTQQLKQVLALVDVRVLDHVIVAGAVATSFAERGLL 168 >gi|289674414|ref|ZP_06495304.1| DNA repair protein RadC [Pseudomonas syringae pv. syringae FF5] gi|330977334|gb|EGH77287.1| hypothetical protein PSYAP_11500 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 224 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ RGTI+ V+ R++V+R + +A S+IL HNHPSG PS +DI Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ V DH+I+G +S ++ Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVERGLM 224 >gi|121608622|ref|YP_996429.1| DNA repair protein RadC [Verminephrobacter eiseniae EF01-2] gi|171769486|sp|A1WIF4|Y1654_VEREI RecName: Full=UPF0758 protein Veis_1654 gi|121553262|gb|ABM57411.1| DNA repair protein RadC [Verminephrobacter eiseniae EF01-2] Length = 237 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N L+A E RGT+ VY RE+V L A +++L HNHPSG+ PS AD Sbjct: 141 LFLDNQNRLLAMEELFRGTLTQTSVYPREVVLHALHHRAAAVVLAHNHPSGSVQPSRADE 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + +TL +++ V DH+I+ +S + ++ Sbjct: 201 ALTQTLKSTLALVDVRVLDHVIVAPGQALSMAEMGLL 237 >gi|153948236|ref|YP_001399737.1| RadC family DNA repair protein [Yersinia pseudotuberculosis IP 31758] gi|152959731|gb|ABS47192.1| DNA repair protein, RadC family [Yersinia pseudotuberculosis IP 31758] Length = 162 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+A E S GT + VY RE+V R L ++++ HNHP+G+P PS AD Sbjct: 64 LFLDNRHRLMASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADR 123 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ LN ++I V DH+IIG+ VS L + Sbjct: 124 TLTAQLVNALNMVDIRVLDHLIIGESEPVSLAELGWL 160 >gi|225174937|ref|ZP_03728934.1| DNA repair protein RadC [Dethiobacter alkaliphilus AHT 1] gi|225169577|gb|EEG78374.1| DNA repair protein RadC [Dethiobacter alkaliphilus AHT 1] Length = 189 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N ++ S+GT++ ++ RE+ + + S++++HNHPSG+P PS DI Sbjct: 93 LFLNTKNKILQHTTISKGTLNTSLIHPREVFAPAIRIKCASVVILHNHPSGDPTPSREDI 152 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DHI+IG FVS + ++ Sbjct: 153 DITKRLKEAGKIIGIELLDHIVIGNKGFVSLREKSLL 189 >gi|291086416|ref|ZP_06571500.1| DNA repair protein RadC [Citrobacter youngae ATCC 29220] gi|291068199|gb|EFE06308.1| DNA repair protein RadC [Citrobacter youngae ATCC 29220] Length = 215 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F+D + +I GT+ HV V+ REIV+ ++++A+++IL HNHPSG PS AD Sbjct: 119 IFMDSQHHVIKHSKLFSGTLSHVEVHPREIVREAIKMNASAVILAHNHPSGCAEPSKADK 178 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ ++I V DH+IIG+ +VSF I Sbjct: 179 LITERVVKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 215 >gi|218899622|ref|YP_002448033.1| DNA repair protein RadC [Bacillus cereus G9842] gi|228902983|ref|ZP_04067123.1| DNA repair protein radC [Bacillus thuringiensis IBL 4222] gi|228910289|ref|ZP_04074106.1| DNA repair protein radC [Bacillus thuringiensis IBL 200] gi|226736616|sp|B7IIW5|Y662_BACC2 RecName: Full=UPF0758 protein BCG9842_B0662 gi|218542904|gb|ACK95298.1| DNA repair protein RadC [Bacillus cereus G9842] gi|228849349|gb|EEM94186.1| DNA repair protein radC [Bacillus thuringiensis IBL 200] gi|228856659|gb|EEN01179.1| DNA repair protein radC [Bacillus thuringiensis IBL 4222] Length = 225 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVLHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|323702262|ref|ZP_08113928.1| DNA repair protein RadC [Desulfotomaculum nigrificans DSM 574] gi|323532752|gb|EGB22625.1| DNA repair protein RadC [Desulfotomaculum nigrificans DSM 574] Length = 241 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +IA EV S GT++ V+ RE+ +R + SA SIILVHNHPSG+P PS DI Sbjct: 145 VLLNIKNQVIAKEVVSIGTLNSSMVHPRELFKRAIRRSAASIILVHNHPSGDPTPSQEDI 204 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + + + DHI+IG + FVS K +I Sbjct: 205 TITKRLMEAGEIIGVQILDHIVIGFEQFVSLKAKGLI 241 >gi|172048112|sp|A5UDB6|Y7200_HAEIE RecName: Full=UPF0758 protein CGSHiEE_07200 Length = 221 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPSYSDQ 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 185 LITKKIQDAAELMEICVLDHLIVGKSDCYSFAENCLL 221 >gi|302184918|ref|ZP_07261591.1| DNA repair protein RadC [Pseudomonas syringae pv. syringae 642] Length = 224 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ RGTI+ V+ R++V+R + +A S+IL HNHPSG PS +DI Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ V DH+I+G +S ++ Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVERGLM 224 >gi|56476778|ref|YP_158367.1| RadC family DNA repair protein [Aromatoleum aromaticum EbN1] gi|56312821|emb|CAI07466.1| DNA repair protein similar to radC-family [Aromatoleum aromaticum EbN1] Length = 164 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E +G++D VY R +VQR L L+A+++IL H HPSG PS AD Sbjct: 68 VFLDSQHQVLAYEPLFKGSVDQTSVYPRVVVQRALALNASALILAHQHPSGVTEPSAADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DH I+GK A SF ++ Sbjct: 128 ALTDRLKDALAMVDVRVVDHFIVGKGAPYSFAEAGLL 164 >gi|124266851|ref|YP_001020855.1| hypothetical protein Mpe_A1658 [Methylibium petroleiphilum PM1] gi|124259626|gb|ABM94620.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 169 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA + RGT+ VY RE+V+ L +A ++IL HNHPSG PS AD Sbjct: 73 LFLDAQHRIIALKQMFRGTVTQTSVYPREVVKEALACNAAAVILAHNHPSGAAEPSRADE 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + T L +++ V DH+++ SF L ++ Sbjct: 133 FLTQTLKTALALVDVRVLDHLVVAGAEVRSFAELGLL 169 >gi|163759426|ref|ZP_02166511.1| DNA repair protein RadC [Hoeflea phototrophica DFL-43] gi|162283023|gb|EDQ33309.1| DNA repair protein RadC [Hoeflea phototrophica DFL-43] Length = 290 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 66/97 (68%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 194 LFLDKKNALIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 253 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ II T PL I VHDHIIIG+D S KG++++ Sbjct: 254 EMTKLIIETARPLGITVHDHIIIGRDGHASLKGMKLV 290 >gi|88706890|ref|ZP_01104589.1| DNA repair protein RadC [Congregibacter litoralis KT71] gi|88698812|gb|EAQ95932.1| DNA repair protein RadC [Congregibacter litoralis KT71] Length = 171 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + +I +GTID VY R +VQ+ L L+A +++ HNHPSG PS AD Sbjct: 75 MYLDNRHRVIETAELFQGTIDGAAVYPRVVVQQALTLNAAAVMFFHNHPSGVAEPSHADE 134 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I V DH I+ +SF ++ Sbjct: 135 AITRRLKDALALVDIRVLDHFIVTAGESLSFAERGLL 171 >gi|229019679|ref|ZP_04176486.1| DNA repair protein radC [Bacillus cereus AH1273] gi|229025918|ref|ZP_04182310.1| DNA repair protein radC [Bacillus cereus AH1272] gi|228735364|gb|EEL85967.1| DNA repair protein radC [Bacillus cereus AH1272] gi|228741586|gb|EEL91779.1| DNA repair protein radC [Bacillus cereus AH1273] Length = 225 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|163734801|ref|ZP_02142239.1| DNA repair protein RadC [Roseobacter litoralis Och 149] gi|161391906|gb|EDQ16237.1| DNA repair protein RadC [Roseobacter litoralis Och 149] Length = 314 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 52/97 (53%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N++IADE Q++GT+DHVPVY RE+ +R LEL+A++IILVHNHPSG+P+PS DI Sbjct: 217 LFLDRKNVIIADEEQAKGTVDHVPVYPREVAKRALELNASAIILVHNHPSGDPSPSSQDI 276 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + + + + +HDH+IIGK+ SFK + Sbjct: 277 AMTDQVSSACLAIGVTIHDHVIIGKETEFSFKDGGYL 313 >gi|229543680|ref|ZP_04432740.1| DNA repair protein RadC [Bacillus coagulans 36D1] gi|229328100|gb|EEN93775.1| DNA repair protein RadC [Bacillus coagulans 36D1] Length = 227 Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + L SA SII HNHPSG+P+PS DI Sbjct: 131 LYLNIKNQVIHRQTIFIGSLNASIVHPREVFKEALRRSAASIICFHNHPSGDPSPSKEDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I + DH+IIG+ FVS + + Sbjct: 191 EVTKRLAECGKIMGIEILDHLIIGEKKFVSLRQKGYL 227 >gi|120612416|ref|YP_972094.1| DNA repair protein RadC [Acidovorax citrulli AAC00-1] gi|171769198|sp|A1TTN2|Y3773_ACIAC RecName: Full=UPF0758 protein Aave_3773 gi|120590880|gb|ABM34320.1| DNA replication and repair protein RadC [Acidovorax citrulli AAC00-1] Length = 237 Score = 129 bits (326), Expect = 9e-29, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIA E RGT+ VY RE+V R L A +++LVHNHPSG PS AD Sbjct: 141 LFLDSQNGLIAMEEMFRGTLSQASVYPREVVVRALHHHAAAVVLVHNHPSGQVQPSRADE 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ L +++ V DHII+ + +S +I Sbjct: 201 TLTRSLTDALRLVDVRVLDHIIVAPGSSLSMAEEGLI 237 >gi|270263658|ref|ZP_06191927.1| 'putative DNA repair protein; CP4-44 prophage' [Serratia odorifera 4Rx13] gi|270042542|gb|EFA15637.1| 'putative DNA repair protein; CP4-44 prophage' [Serratia odorifera 4Rx13] Length = 160 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+ E G+I+ V+ REIV+ L+ +A +++L H HPSG+ NPSDAD Sbjct: 64 LYLDNQHRLLTHETLFTGSINSTEVHPREIVKSALKHNAAAVLLAHCHPSGHANPSDADR 123 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L + + V DH I+G SF ++ Sbjct: 124 QITCRIQEALMLVEVRVLDHCIVGGMTVYSFAEHGLL 160 >gi|254292990|ref|YP_003059013.1| DNA repair protein RadC [Hirschia baltica ATCC 49814] gi|254041521|gb|ACT58316.1| DNA repair protein RadC [Hirschia baltica ATCC 49814] Length = 272 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 56/97 (57%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIADE QS+GTI+H PVY RE+ +R LELSA+++ILVHNHPSG+P PS ADI Sbjct: 176 LFLDHKNQLIADERQSQGTINHAPVYPRELAKRALELSASALILVHNHPSGDPTPSRADI 235 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ I+ PL I +HDH+I+GK S K +I Sbjct: 236 DVTREIMDAFEPLEITIHDHLIVGKKGITSLKAKNLI 272 >gi|163942202|ref|YP_001647086.1| DNA repair protein RadC [Bacillus weihenstephanensis KBAB4] gi|229169196|ref|ZP_04296910.1| DNA repair protein radC [Bacillus cereus AH621] gi|229485544|sp|A9VIS8|Y4299_BACWK RecName: Full=UPF0758 protein BcerKBAB4_4299 gi|163864399|gb|ABY45458.1| DNA repair protein RadC [Bacillus weihenstephanensis KBAB4] gi|228614262|gb|EEK71373.1| DNA repair protein radC [Bacillus cereus AH621] Length = 225 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|237807914|ref|YP_002892354.1| DNA repair protein RadC [Tolumonas auensis DSM 9187] gi|237500175|gb|ACQ92768.1| DNA repair protein RadC [Tolumonas auensis DSM 9187] Length = 165 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E RGT++ ++ RE+V+R L ++A ++I VHNHPSG P PS+AD Sbjct: 69 LFLDNQHRIICFEELFRGTLNVTNIHPREVVKRALAVNAAAVIFVHNHPSGEPEPSEADK 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + TLN +++ V DHI++G A +S ++ Sbjct: 129 KITVQLRETLNLIDVRVLDHIVVGAKACISMAERGLV 165 >gi|163737937|ref|ZP_02145353.1| DNA repair protein RadC [Phaeobacter gallaeciensis BS107] gi|161388553|gb|EDQ12906.1| DNA repair protein RadC [Phaeobacter gallaeciensis BS107] Length = 254 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 54/97 (55%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N LIADE Q++GT+DHVPVY REI +R LE+SA+++ILVHNHPSG+P PS +DI Sbjct: 158 LYLDRKNTLIADEEQAKGTVDHVPVYPREIAKRALEISASALILVHNHPSGDPTPSPSDI 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + L L+I++HDH+IIGK + +SF+ + Sbjct: 218 EMTDRVARALAALDIVLHDHLIIGKSSELSFRSAGYL 254 >gi|229823990|ref|ZP_04450059.1| hypothetical protein GCWU000282_01294 [Catonella morbi ATCC 51271] gi|229786344|gb|EEP22458.1| hypothetical protein GCWU000282_01294 [Catonella morbi ATCC 51271] Length = 231 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 55/93 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I ++ G+++ + REI + ++ +I+ HNHPSG+P PS AD+ Sbjct: 133 LFLNSKNQVIRQQIIFIGSVNASVAHPREIFKEAVKYPTARLIIAHNHPSGDPEPSQADL 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 + TQ +I + + I + DH IIG D +VS + Sbjct: 193 HFTQRMIQCGDLMGIELLDHFIIGHDDYVSLRE 225 >gi|163791281|ref|ZP_02185695.1| DNA repair protein RadC [Carnobacterium sp. AT7] gi|159873422|gb|EDP67512.1| DNA repair protein RadC [Carnobacterium sp. AT7] Length = 230 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 54/95 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I E G ++ + REI + + SA II+ HNHPSGNP PS+ADI Sbjct: 134 LYLNTKNEIIKKETIFIGGLNSSVAHPREIFRGAVRYSAARIIVGHNHPSGNPEPSEADI 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 T+ + + I + DHIIIG+ F+S K + Sbjct: 194 QFTRRMSECGELMGIELLDHIIIGEQEFISLKEIG 228 >gi|85705707|ref|ZP_01036804.1| DNA repair protein RadC [Roseovarius sp. 217] gi|85669697|gb|EAQ24561.1| DNA repair protein RadC [Roseovarius sp. 217] Length = 251 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 55/96 (57%), Positives = 75/96 (78%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD+ NILIADE Q+RGT+DHVPVY RE+V+R L+L+A+++IL HNHPSG+P PS ADI+ Sbjct: 156 YLDRKNILIADEEQARGTVDHVPVYPREVVKRALQLNASALILAHNHPSGDPTPSAADID 215 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + T L + +HDHI+IGK A VSF+ + Sbjct: 216 MTRQLQTAAEALGLALHDHIVIGKSAEVSFRSAGYL 251 >gi|319785772|ref|YP_004145247.1| DNA repair protein RadC [Pseudoxanthomonas suwonensis 11-1] gi|317464284|gb|ADV26016.1| DNA repair protein RadC [Pseudoxanthomonas suwonensis 11-1] Length = 224 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +A E GTID V+ RE+V+R L +A ++I+ HNHPSG+P+PS AD Sbjct: 128 LFLDNRHRALAFEELFNGTIDGAEVHPREVVRRALAHNAAAVIVGHNHPSGSPDPSAADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L + + + DH ++G VS ++ Sbjct: 188 AVTARLKQALALVEVRLLDHFVVGDGEPVSMAARGLV 224 >gi|238918036|ref|YP_002931550.1| DNA repair protein RadC [Edwardsiella ictaluri 93-146] gi|238867604|gb|ACR67315.1| DNA repair protein RadC [Edwardsiella ictaluri 93-146] Length = 228 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E GTI+ V VY REIV+ L+L+A ++IL HNHPSGNP PS AD Sbjct: 132 LFLDNQHRVIRSEQMFSGTINCVDVYPREIVREALKLNAVALILAHNHPSGNPEPSVADR 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + ++I V DH++IG VSF I Sbjct: 192 LLTDRVAKACALVDIQVLDHMVIGHGQRVSFAERGWI 228 >gi|268318025|ref|YP_003291744.1| DNA repair protein RadC [Rhodothermus marinus DSM 4252] gi|262335559|gb|ACY49356.1| DNA repair protein RadC [Rhodothermus marinus DSM 4252] Length = 245 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +IAD S G + V R + QR + +A II +HNHPSGNP PS DI Sbjct: 148 VLLNTANYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSGNPEPSAEDI 207 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I VHDHIII + S ++ Sbjct: 208 RITRQLVEAGRLLGIPVHDHIIIAGTTYTSLAERGLM 244 >gi|1573977|gb|AAC22613.1| DNA repair protein (radC) [Haemophilus influenzae Rd KW20] Length = 234 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 138 LFLDNQHRLIKKERLFLGTIYVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 234 >gi|227112487|ref|ZP_03826143.1| hypothetical protein PcarbP_05962 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 157 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LI EV + G I+ V+ REI++ L +A ++IL HNHPSG PS AD Sbjct: 61 LYLDNQNRLIEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGCAEPSQADR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T + +L+ L++ V DH+++G VSF + Sbjct: 121 HITDKLKESLSQLDVRVLDHLVVGGAEVVSFAERGWL 157 >gi|254503230|ref|ZP_05115381.1| DNA repair protein RadC [Labrenzia alexandrii DFL-11] gi|222439301|gb|EEE45980.1| DNA repair protein RadC [Labrenzia alexandrii DFL-11] Length = 237 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 61/97 (62%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADE+Q GT+DH PVY RE+V+R LE AT+IILVHNHPSG+P PS ADI Sbjct: 141 LFLDKKNGLIADELQQTGTVDHTPVYPREVVRRALEHGATAIILVHNHPSGDPTPSRADI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ ++ PL I +HDHII+G + VSFKGL++I Sbjct: 201 QMTRQLVDIAKPLGIEIHDHIIVGLRSQVSFKGLQLI 237 >gi|259047287|ref|ZP_05737688.1| DNA repair protein RadC [Granulicatella adiacens ATCC 49175] gi|259036063|gb|EEW37318.1| DNA repair protein RadC [Granulicatella adiacens ATCC 49175] Length = 227 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I ++ G ++ + REI + + SA +I+ HNHPSGNP PS ADI Sbjct: 131 LYLNTKNEVIKKKMIFIGGLNSAVAHPREIFREAVRYSAARVIIGHNHPSGNPEPSQADI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + T+ ++ + I + DH I+G + F+S K + ++ Sbjct: 191 DFTKRLMDCGELMGIELLDHFIVGGEHFISLKEIGVL 227 >gi|15965481|ref|NP_385834.1| DNA repair protein RadC [Sinorhizobium meliloti 1021] gi|307302602|ref|ZP_07582358.1| DNA repair protein RadC [Sinorhizobium meliloti BL225C] gi|307318449|ref|ZP_07597883.1| DNA repair protein RadC [Sinorhizobium meliloti AK83] gi|25009036|sp|Q92PL6|Y1728_RHIME RecName: Full=UPF0758 protein R01728 gi|15074662|emb|CAC46307.1| Probable DNA repair protein [Sinorhizobium meliloti 1021] gi|306895789|gb|EFN26541.1| DNA repair protein RadC [Sinorhizobium meliloti AK83] gi|306902966|gb|EFN33557.1| DNA repair protein RadC [Sinorhizobium meliloti BL225C] Length = 262 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 66/96 (68%), Positives = 77/96 (80%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ +GTIDH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI Sbjct: 166 LFLDKRNTLIADEVQQQGTIDHTPVYPREVVKRALELSATALILVHNHPSGDPTPSRADI 225 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +MT+ I PL I +HDH+IIGKD VS KGLR+ Sbjct: 226 DMTKLIAEAAKPLGIALHDHVIIGKDGHVSLKGLRL 261 >gi|99079849|ref|YP_612003.1| DNA repair protein RadC [Ruegeria sp. TM1040] gi|99036129|gb|ABF62741.1| DNA repair protein RadC [Ruegeria sp. TM1040] Length = 258 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ NILIADE Q+RGT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS ADI Sbjct: 162 LYLDRKNILIADEEQARGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQADI 221 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + L L+I +HDH+IIG +SF+ ++ Sbjct: 222 GMTRKVGAALGALDITLHDHLIIGASDELSFRSEGLL 258 >gi|77461760|ref|YP_351267.1| DNA repair protein RadC [Pseudomonas fluorescens Pf0-1] gi|123602798|sp|Q3K4M8|Y5539_PSEPF RecName: Full=UPF0758 protein Pfl01_5539 gi|77385763|gb|ABA77276.1| DNA replication and repair protein RadC [Pseudomonas fluorescens Pf0-1] Length = 224 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E RG+ID+ V+ RE+V+R L +A ++IL HNHPSGN +PS AD Sbjct: 128 LFLDSKHQVLTFEALFRGSIDNTAVHPREVVKRSLANNAAAVILCHNHPSGNSDPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH I+G +S + Sbjct: 188 LLTKRLQKALELIDVRVLDHFIVGDGEPLSMAECGWM 224 >gi|71734935|ref|YP_272515.1| DNA repair protein RadC [Pseudomonas syringae pv. phaseolicola 1448A] gi|289625760|ref|ZP_06458714.1| DNA repair protein RadC [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646363|ref|ZP_06477706.1| DNA repair protein RadC [Pseudomonas syringae pv. aesculi str. 2250] gi|298484831|ref|ZP_07002931.1| DNA repair protein RadC [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|123638799|sp|Q48Q04|Y210_PSE14 RecName: Full=UPF0758 protein PSPPH_0210 gi|71555488|gb|AAZ34699.1| DNA repair protein RadC [Pseudomonas syringae pv. phaseolicola 1448A] gi|298160685|gb|EFI01706.1| DNA repair protein RadC [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322246|gb|EFW78342.1| DNA repair protein RadC [Pseudomonas syringae pv. glycinea str. B076] gi|320331895|gb|EFW87833.1| DNA repair protein RadC [Pseudomonas syringae pv. glycinea str. race 4] gi|330866535|gb|EGH01244.1| hypothetical protein PSYAE_04585 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330873142|gb|EGH07291.1| hypothetical protein Pgy4_03892 [Pseudomonas syringae pv. glycinea str. race 4] gi|330890934|gb|EGH23595.1| hypothetical protein PSYMO_19883 [Pseudomonas syringae pv. mori str. 301020] gi|330986860|gb|EGH84963.1| hypothetical protein PLA107_17667 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009400|gb|EGH89456.1| hypothetical protein PSYTB_06881 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 224 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ RGTI+ V+ R++V+R + +A S+IL HNHPSG PS +DI Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ V DH+I+G +S ++ Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVERGLM 224 >gi|163743881|ref|ZP_02151252.1| DNA repair protein RadC [Phaeobacter gallaeciensis 2.10] gi|161382822|gb|EDQ07220.1| DNA repair protein RadC [Phaeobacter gallaeciensis 2.10] Length = 254 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 54/97 (55%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N LIADE Q++GT+DHVPVY REI +R LE+SA+++ILVHNHPSG+P PS +DI Sbjct: 158 LYLDRKNTLIADEEQAKGTVDHVPVYPREIAKRALEISASALILVHNHPSGDPTPSPSDI 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + L L+I++HDH+IIGK + +SF+ + Sbjct: 218 EMTDRVARALAALDIVLHDHLIIGKSSELSFRSAGYL 254 >gi|197104531|ref|YP_002129908.1| DNA repair protein [Phenylobacterium zucineum HLK1] gi|196477951|gb|ACG77479.1| DNA repair protein [Phenylobacterium zucineum HLK1] Length = 243 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N L+ADEV + GT+DH PVY RE+V+R LELSA+++ILVHNHPSG+P PS AD+ Sbjct: 147 LFLDKKNQLLADEVMNHGTVDHAPVYPREVVRRALELSASALILVHNHPSGDPTPSSADV 206 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ ++ L I VHDH+++G+D SFK L ++ Sbjct: 207 DMTRQVVDAARALRIAVHDHLVVGRDGVASFKALGLM 243 >gi|311031478|ref|ZP_07709568.1| DNA repair protein RadC [Bacillus sp. m3-13] Length = 232 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ + G+++ V+ RE+ + SA S I +HNHPSG+P PS DI Sbjct: 136 LYLNTKNQVLHQQTVFIGSLNASIVHPREVFKEAFRRSAASFICIHNHPSGDPAPSREDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DH+IIG F+S K + Sbjct: 196 DVTKRLSECGKLIGIELLDHLIIGDQKFISLKEKGYV 232 >gi|254247438|ref|ZP_04940759.1| DNA repair protein RadC [Burkholderia cenocepacia PC184] gi|124872214|gb|EAY63930.1| DNA repair protein RadC [Burkholderia cenocepacia PC184] Length = 257 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N LI E +RG++ + VY REIV+R ++ +A ++I+ HNHPSG PS D Sbjct: 161 VYLDARNRLIDMEEIARGSLTRMAVYPREIVRRAMKHNAAALIVAHNHPSGAVQPSAEDR 220 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G SF + Sbjct: 221 RLTRVLKDALELVDVRLLDHVVVGVSDTFSFARAGWL 257 >gi|307945547|ref|ZP_07660883.1| putative DNA repair RadC-like protein [Roseibium sp. TrichSKD4] gi|307771420|gb|EFO30645.1| putative DNA repair RadC-like protein [Roseibium sp. TrichSKD4] Length = 237 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+++R LEL +T+++L+HNHPSG+P PS ADI Sbjct: 141 LFLDKKNGLIADEVQQEGTVDHTPVYPREVIRRALELQSTALVLIHNHPSGDPTPSRADI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ ++ PL I +HDHII+ + A VSF+G++++ Sbjct: 201 QMTRQLVEIAKPLGIEIHDHIIVARGAHVSFRGMQLM 237 >gi|59713705|ref|YP_206480.1| DNA repair protein RadC [Vibrio fischeri ES114] gi|59481953|gb|AAW87592.1| DNA repair protein RadC [Vibrio fischeri ES114] Length = 157 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI + +GT+D VY RE+V+ LE++A ++I HNHPSG PS AD Sbjct: 62 LLLDNQHRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADK 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DHI++G + VSF +I Sbjct: 122 RITTRLKEALALIDVQVLDHIVVG-ETCVSFAERGLI 157 >gi|317493871|ref|ZP_07952288.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918198|gb|EFV39540.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA] Length = 159 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ N LIA E G+I V+ RE+V+R L +A ++IL HNHPSG+ PS AD Sbjct: 63 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSLADK 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ+++ L ++I V DH+I+G +SF ++ Sbjct: 123 TITQHLVQALQLVDIRVPDHLIVGGAQILSFAEHGLL 159 >gi|300923422|ref|ZP_07139463.1| DNA repair protein RadC domain protein [Escherichia coli MS 182-1] gi|300420332|gb|EFK03643.1| DNA repair protein RadC domain protein [Escherichia coli MS 182-1] Length = 128 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 32 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 91 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 92 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 128 >gi|320179974|gb|EFW54916.1| DNA repair protein RadC [Shigella boydii ATCC 9905] Length = 222 Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS A Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAGK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222 >gi|260432018|ref|ZP_05785989.1| DNA repair protein RadC [Silicibacter lacuscaerulensis ITI-1157] gi|260415846|gb|EEX09105.1| DNA repair protein RadC [Silicibacter lacuscaerulensis ITI-1157] Length = 251 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 51/96 (53%), Positives = 72/96 (75%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD+ N+LIADE Q++GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS +DI+ Sbjct: 156 YLDRKNVLIADEEQAKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQSDID 215 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I L + +HDH+IIGK +SF+ + Sbjct: 216 MTNRINDACAALGLTLHDHLIIGKSTELSFRSEGYL 251 >gi|254488973|ref|ZP_05102178.1| DNA repair protein RadC [Roseobacter sp. GAI101] gi|214045842|gb|EEB86480.1| DNA repair protein RadC [Roseobacter sp. GAI101] Length = 252 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 52/97 (53%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N++I DE Q +GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS ADI Sbjct: 156 LYLDRKNVIIGDEEQGKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQADI 215 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MTQ I+ L + +HDH+IIGK +SF+ + Sbjct: 216 DMTQQILGACTALGLTLHDHLIIGKSRELSFRSEGYL 252 >gi|227889744|ref|ZP_04007549.1| DNA repair protein RadC [Lactobacillus johnsonii ATCC 33200] gi|227849608|gb|EEJ59694.1| DNA repair protein RadC [Lactobacillus johnsonii ATCC 33200] Length = 203 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +IA+++ +GT++ + R+I + + ++T+ + HNHPSG+ PS D+ Sbjct: 107 IYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDL 166 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ + I DH I+ + ++SF+ ++ Sbjct: 167 RFTKKLVEASKYMGIDFLDHFIVTDNTYLSFRETELL 203 >gi|28378902|ref|NP_785794.1| DNA repair protein [Lactobacillus plantarum WCFS1] gi|254557107|ref|YP_003063524.1| DNA repair protein [Lactobacillus plantarum JDM1] gi|300769705|ref|ZP_07079588.1| DNA repair protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181103|ref|YP_003925231.1| DNA repair protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|28271739|emb|CAD64645.1| DNA repair protein [Lactobacillus plantarum WCFS1] gi|254046034|gb|ACT62827.1| DNA repair protein [Lactobacillus plantarum JDM1] gi|300492748|gb|EFK27933.1| DNA repair protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046594|gb|ADN99137.1| DNA repair protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 211 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N +I +V +GT++ P REI++ L +++ HNHPSG+ PS D+ Sbjct: 109 LCLDTKNQVIKRQVVFQGTLNSCPAQPREIIKVALTTPTARVVIAHNHPSGDVTPSKKDV 168 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + + + D IIG + + SF ++ Sbjct: 169 EFTKRLQLACELMGLPLLDSFIIGVNDYFSFAEQGVL 205 >gi|268319717|ref|YP_003293373.1| DNA repair protein RadC [Lactobacillus johnsonii FI9785] gi|262398092|emb|CAX67106.1| DNA repair protein RadC [Lactobacillus johnsonii FI9785] Length = 203 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +IA+++ +GT++ + R+I + + ++T+ + HNHPSG+ PS D+ Sbjct: 107 IYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDL 166 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ + I DH I+ + ++SF+ ++ Sbjct: 167 RFTKKLVEASKCMGIDFLDHFIVTDNTYLSFRETELL 203 >gi|322835042|ref|YP_004215069.1| DNA repair protein RadC [Rahnella sp. Y9602] gi|321170243|gb|ADW75942.1| DNA repair protein RadC [Rahnella sp. Y9602] Length = 226 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E GTI HV VY REIV+ ++++A ++IL HNHPSG PS D Sbjct: 130 LFLDNQHRVIRHEEMFAGTIGHVEVYPREIVRGAMKVNAAALILAHNHPSGRAEPSLMDR 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II L I V DH+++G VSF I Sbjct: 190 KVTEQIIRACQLLEIRVLDHLVVGHGETVSFAERGWI 226 >gi|254511714|ref|ZP_05123781.1| DNA repair protein RadC [Rhodobacteraceae bacterium KLH11] gi|221535425|gb|EEE38413.1| DNA repair protein RadC [Rhodobacteraceae bacterium KLH11] Length = 251 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 52/96 (54%), Positives = 74/96 (77%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD+ N+LIADE Q++GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS +DI+ Sbjct: 156 YLDRKNVLIADEEQAKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQSDID 215 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I + L + +HDH+IIGK A +SF+ + Sbjct: 216 MTNRIQDACSALGLTLHDHLIIGKSAELSFRSHGYL 251 >gi|88858999|ref|ZP_01133640.1| associated with replication fork DNA repair protein [Pseudoalteromonas tunicata D2] gi|88819225|gb|EAR29039.1| associated with replication fork DNA repair protein [Pseudoalteromonas tunicata D2] Length = 245 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LI ++ GTI+ VY RE+V+ L+++A ++I HNHPSG PS AD Sbjct: 149 LFLDNQNRLICQKILFYGTINAAAVYPREVVKEVLKMNANAVIFAHNHPSGIAEPSQADQ 208 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+ +++ V DH+I+G + VSF ++ Sbjct: 209 VITRKLTQALSLIDVAVLDHLIVGGNQVVSFAERGLL 245 >gi|118578660|ref|YP_899910.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379] gi|118501370|gb|ABK97852.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379] Length = 163 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N ++ + S G+++ V+ RE+ + +A +I+LVHNHP+G+PNPS DI Sbjct: 67 LHLDGKNRIVCFDRVSIGSLNQAIVHPREVFKTACLSNAAAILLVHNHPTGDPNPSSEDI 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + L I V DHII+G D F+SF ++ Sbjct: 127 AITKRLKESGDILGIRVLDHIIVGDDEFLSFVERGLL 163 >gi|222111947|ref|YP_002554211.1| DNA repair protein Radc [Acidovorax ebreus TPSY] gi|254789648|sp|B9MEH2|Y2777_DIAST RecName: Full=UPF0758 protein Dtpsy_2777 gi|221731391|gb|ACM34211.1| DNA repair protein RadC [Acidovorax ebreus TPSY] Length = 238 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIA E RGT+ VY RE+V R L A +++L HNHPSG+ PS AD Sbjct: 142 LFLDSGNRLIAMEELFRGTLTQTSVYPREVVLRALHHHAAAVVLAHNHPSGSVQPSRADE 201 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH+I+ A +S ++ Sbjct: 202 ALTQTLKAALALVDVRVLDHVIVAPGAALSMAEQGLV 238 >gi|322382581|ref|ZP_08056459.1| RadC-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153436|gb|EFX45843.1| RadC-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 209 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N ++A E S G+++ V+ RE+ + ++ S+ SII VHNHPSGNP PS DI Sbjct: 113 LFLNTKNQVLAKETMSIGSLNASIVHPREVFRAAIKRSSASIICVHNHPSGNPTPSLDDI 172 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ +I + I V DHIIIG A+VS K + Sbjct: 173 DITQRLIEAGAIIGIDVLDHIIIGDKAYVSLKEQGYM 209 >gi|239817003|ref|YP_002945913.1| DNA repair protein RadC [Variovorax paradoxus S110] gi|259551914|sp|C5CWP0|Y4033_VARPS RecName: Full=UPF0758 protein Vapar_4033 gi|239803580|gb|ACS20647.1| DNA repair protein RadC [Variovorax paradoxus S110] Length = 225 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E RGT+ VY RE+V R L A +++L HNHPSG+ PS AD Sbjct: 129 LFLDAQHRLIVLEELFRGTLTQTSVYPREVVTRALHHQAAAVVLSHNHPSGSIEPSRADE 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ + L+ +++ V DH+I+ S ++ Sbjct: 189 SLTQTLRAALSLIDVRVLDHVIVSAGQSYSMAEKGLL 225 >gi|172046847|sp|Q12EY8|Y948_POLSJ RecName: Full=UPF0758 protein Bpro_0948 Length = 224 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E RGT+ VY RE+V R L L+A S++L HNHPSG PS AD Sbjct: 128 LFLDSQHRLIALEELFRGTLTQTSVYPREVVVRALALNAASVVLAHNHPSGAATPSRADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + L +++ V DH ++ VS L ++ Sbjct: 188 ALTQTLKSALALVDVRVLDHFVVTSTQAVSMAELGLL 224 >gi|254784439|ref|YP_003071867.1| DNA repair protein RadC [Teredinibacter turnerae T7901] gi|259551909|sp|C5BLG5|Y184_TERTT RecName: Full=UPF0758 protein TERTU_0184 gi|237685002|gb|ACR12266.1| DNA repair protein RadC [Teredinibacter turnerae T7901] Length = 224 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L++ ++ GTID VY RE+V++CL +A ++I HNHPSG PS+AD Sbjct: 128 LFLDSQHRLLSFDILFNGTIDGAAVYPREVVKKCLAHNAAAVIFAHNHPSGVAEPSEADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L L+I DHI++G+ VSF + Sbjct: 188 QITDRLCRALQLLDIRTLDHIVVGEGDAVSFADRGWL 224 >gi|304310173|ref|YP_003809771.1| DNA repair protein [gamma proteobacterium HdN1] gi|301795906|emb|CBL44107.1| DNA repair protein [gamma proteobacterium HdN1] Length = 224 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI GT+D VY RE+V+ L +A ++I HNHPSG PS AD Sbjct: 128 LFLDSQHRLIQYRELFYGTLDSAAVYPREVVKEALRCNAGALIFAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T + L+ ++I V DH+++G VS ++ Sbjct: 188 SITLRLRDALSLVDIRVLDHLVVGDCEVVSLAARGML 224 >gi|73542417|ref|YP_296937.1| DNA repair protein RadC [Ralstonia eutropha JMP134] gi|123624203|sp|Q46XP0|Y2732_RALEJ RecName: Full=UPF0758 protein Reut_A2732 gi|72119830|gb|AAZ62093.1| DNA repair protein RadC [Ralstonia eutropha JMP134] Length = 228 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 36/95 (37%), Positives = 55/95 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +IA E RGT++ VY RE+ +R L +A S+I+ HNHPSG PS +D+ Sbjct: 128 LFLDTRNRMIASEELFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCCTPSQSDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 MT+ + L+ +++ + DH ++ SF Sbjct: 188 QMTRMLARALDLIDVRLLDHFVVAGTHVHSFAEHG 222 >gi|18311126|ref|NP_563060.1| DNA repair protein RadC [Clostridium perfringens str. 13] gi|168212819|ref|ZP_02638444.1| DNA repair protein, RadC family [Clostridium perfringens CPE str. F4969] gi|168215771|ref|ZP_02641396.1| DNA repair protein, RadC family [Clostridium perfringens NCTC 8239] gi|182623959|ref|ZP_02951747.1| DNA repair protein, RadC family [Clostridium perfringens D str. JGS1721] gi|25009030|sp|Q8XIH5|Y2144_CLOPE RecName: Full=UPF0758 protein CPE2144 gi|18145809|dbj|BAB81850.1| DNA repair protein [Clostridium perfringens str. 13] gi|170715570|gb|EDT27752.1| DNA repair protein, RadC family [Clostridium perfringens CPE str. F4969] gi|177910852|gb|EDT73206.1| DNA repair protein, RadC family [Clostridium perfringens D str. JGS1721] gi|182382393|gb|EDT79872.1| DNA repair protein, RadC family [Clostridium perfringens NCTC 8239] Length = 227 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 57/95 (60%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD N +I+ + +G ++ V+ REI + ++ SA SII+ HNHPSG+P PS DIN+ Sbjct: 133 LDTKNKVISKKEIFKGGLNSSLVHPREIFREAVKDSAASIIICHNHPSGDPTPSRDDINI 192 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + + I + DH+IIG + F+S K I+ Sbjct: 193 TTRLKECGKMMGIELLDHLIIGDNRFISLKEKDIL 227 >gi|21243995|ref|NP_643577.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306] gi|21109610|gb|AAM38113.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306] Length = 187 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 41/96 (42%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I+ E GT+D V+ R + +R LELSA ++IL HNHPSGNP PS+AD Sbjct: 91 VFLDNQHHIISTEHLFTGTVDGCDVHPRVVAKRALELSAAAVILFHNHPSGNPEPSEADR 150 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + L+ L+I V DH++IG VS Sbjct: 151 KVTERLKQALSLLDIRVLDHLVIGGQQHVSLASRGW 186 >gi|308047854|ref|YP_003911420.1| DNA repair protein RadC [Ferrimonas balearica DSM 9799] gi|307630044|gb|ADN74346.1| DNA repair protein RadC [Ferrimonas balearica DSM 9799] Length = 227 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + ++ SRGTID VY RE+V+ L+ +A ++IL HNHPSG PS AD Sbjct: 131 LLLDSQHRVLQTIELSRGTIDAAQVYPREVVKTALKANAAAVILAHNHPSGVAEPSQADR 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I L +++ V DH+++G+ SF + Sbjct: 191 HITGRIQQALALVDVSVLDHLVVGRGQSCSFAERGWL 227 >gi|322421682|ref|YP_004200905.1| DNA repair protein RadC [Geobacter sp. M18] gi|320128069|gb|ADW15629.1| DNA repair protein RadC [Geobacter sp. M18] Length = 231 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N +I S G+++ V+ RE+ + SA ++IL+HNHP+G+P PS D+ Sbjct: 135 LLLDGKNRIITRAQISEGSLNQSIVHPREVFNAAVRQSAAAMILLHNHPTGDPTPSPEDL 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I V DHIIIG+DAF SF + Sbjct: 195 EVTRRLCEAGQLMGIRVLDHIIIGEDAFYSFADHGQL 231 >gi|254429018|ref|ZP_05042725.1| DNA repair protein RadC [Alcanivorax sp. DG881] gi|196195187|gb|EDX90146.1| DNA repair protein RadC [Alcanivorax sp. DG881] Length = 164 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ + +++ E GTID VY R +VQ+ L +A ++I HNHPSG PS AD Sbjct: 68 IFLNNKHKVLSFEPLFNGTIDGAAVYPRVVVQQALACNAAAVIFAHNHPSGCCEPSQADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DH ++ + +VS + Sbjct: 128 TITTRLKDALALIDVRVLDHFVVSRSEWVSLAQRGWL 164 >gi|107023439|ref|YP_621766.1| DNA repair protein RadC [Burkholderia cenocepacia AU 1054] gi|116690521|ref|YP_836144.1| DNA repair protein RadC [Burkholderia cenocepacia HI2424] gi|170733862|ref|YP_001765809.1| DNA repair protein RadC [Burkholderia cenocepacia MC0-3] gi|123244775|sp|Q1BUB2|Y1890_BURCA RecName: Full=UPF0758 protein Bcen_1890 gi|171855185|sp|A0K9S4|Y2501_BURCH RecName: Full=UPF0758 protein Bcen2424_2501 gi|238688599|sp|B1JXB2|Y2526_BURCC RecName: Full=UPF0758 protein Bcenmc03_2526 gi|105893628|gb|ABF76793.1| DNA replication and repair protein RadC [Burkholderia cenocepacia AU 1054] gi|116648610|gb|ABK09251.1| DNA replication and repair protein RadC [Burkholderia cenocepacia HI2424] gi|169817104|gb|ACA91687.1| DNA repair protein RadC [Burkholderia cenocepacia MC0-3] Length = 257 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N LI E +RG++ + VY REIV+R ++ +A ++I+ HNHPSG PS D Sbjct: 161 VYLDARNRLIDMEEIARGSLTRMAVYPREIVRRAMKHNAAALIVAHNHPSGAVQPSAEDR 220 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G SF + Sbjct: 221 RLTRVLKDALELVDVRLLDHVVVGVSDTFSFARAGWL 257 >gi|228993193|ref|ZP_04153114.1| DNA repair protein radC [Bacillus pseudomycoides DSM 12442] gi|228999243|ref|ZP_04158823.1| DNA repair protein radC [Bacillus mycoides Rock3-17] gi|229006790|ref|ZP_04164423.1| DNA repair protein radC [Bacillus mycoides Rock1-4] gi|228754412|gb|EEM03824.1| DNA repair protein radC [Bacillus mycoides Rock1-4] gi|228760440|gb|EEM09406.1| DNA repair protein radC [Bacillus mycoides Rock3-17] gi|228766519|gb|EEM15161.1| DNA repair protein radC [Bacillus pseudomycoides DSM 12442] Length = 225 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVMHRQTVFIGSLNASIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >gi|110800059|ref|YP_696822.1| DNA repair protein RadC [Clostridium perfringens ATCC 13124] gi|168208846|ref|ZP_02634471.1| DNA repair protein, RadC family [Clostridium perfringens B str. ATCC 3626] gi|123148570|sp|Q0TNG8|Y2399_CLOP1 RecName: Full=UPF0758 protein CPF_2399 gi|110674706|gb|ABG83693.1| DNA repair protein, RadC family [Clostridium perfringens ATCC 13124] gi|170713218|gb|EDT25400.1| DNA repair protein, RadC family [Clostridium perfringens B str. ATCC 3626] Length = 227 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 57/95 (60%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD N +I+ + +G ++ V+ REI + ++ SA SII+ HNHPSG+P PS DIN+ Sbjct: 133 LDTKNKVISKKEIFKGGLNSSLVHPREIFREAVKDSAASIIICHNHPSGDPTPSRDDINI 192 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + + I + DH+IIG + F+S K I+ Sbjct: 193 TTRLKECGKMMGIELLDHLIIGDNRFISLKEKDIL 227 >gi|30249435|ref|NP_841505.1| DNA repair protein RadC [Nitrosomonas europaea ATCC 19718] gi|54036235|sp|Q82UL9|Y1464_NITEU RecName: Full=UPF0758 protein NE1464 gi|30138798|emb|CAD85375.1| DNA repair protein radC family [Nitrosomonas europaea ATCC 19718] Length = 224 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + I E GT+ VY RE+V+R L +A ++I HNHPSG PS AD Sbjct: 128 IFLDARHRTIVTEELFNGTLTQASVYPREVVKRALYHNAAAMIFAHNHPSGIAEPSTADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ++ L +++ V DH +IG VSF +I Sbjct: 188 ILTQSLKQALALVDVKVLDHFVIGSSEVVSFAERGLI 224 >gi|42518886|ref|NP_964816.1| DNA repair protein RadC [Lactobacillus johnsonii NCC 533] gi|41583172|gb|AAS08782.1| DNA repair protein RadC [Lactobacillus johnsonii NCC 533] gi|329667568|gb|AEB93516.1| DNA repair protein RadC [Lactobacillus johnsonii DPC 6026] Length = 203 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +IA+++ +GT++ + R+I + + ++T+ + HNHPSG+ PS D+ Sbjct: 107 IYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDL 166 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ + I DH I+ + ++SF+ ++ Sbjct: 167 RFTKKLVEASKCMGIDFLDHFIVTDNTYLSFRETELL 203 >gi|77164149|ref|YP_342674.1| DNA repair protein RadC [Nitrosococcus oceani ATCC 19707] gi|254436177|ref|ZP_05049684.1| DNA repair protein RadC [Nitrosococcus oceani AFC27] gi|76882463|gb|ABA57144.1| DNA repair protein RadC [Nitrosococcus oceani ATCC 19707] gi|207089288|gb|EDZ66560.1| DNA repair protein RadC [Nitrosococcus oceani AFC27] Length = 171 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + +I +GTID VY R +VQ+ L ++A +++ HNHPSG PS+AD Sbjct: 75 LYLDNRHRVIETVELFQGTIDGASVYPRVVVQQALSVNAAAVMFFHNHPSGVAEPSNADE 134 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I V DH ++ +SF ++ Sbjct: 135 AITRRLKEALALVDIRVLDHFVVTAGESISFAERGLL 171 >gi|220929963|ref|YP_002506872.1| DNA repair protein RadC [Clostridium cellulolyticum H10] gi|220000291|gb|ACL76892.1| DNA repair protein RadC [Clostridium cellulolyticum H10] Length = 229 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N ++ E S G+++ V+ RE+ ++ SII +HNHPSG+P PS D+ Sbjct: 133 ILLDTKNKVLKTESISIGSLNASIVHPREVFSEAVKCGCNSIIFIHNHPSGDPTPSKEDL 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T +I N L I V DHII+G +VS K I Sbjct: 193 QTTDRLINAGNILGIKVLDHIILGDGRYVSLKEQGFI 229 >gi|110801616|ref|YP_699420.1| DNA repair protein RadC [Clostridium perfringens SM101] gi|122956547|sp|Q0SR37|Y2111_CLOPS RecName: Full=UPF0758 protein CPR_2111 gi|110682117|gb|ABG85487.1| DNA repair protein, RadC family [Clostridium perfringens SM101] Length = 227 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 57/95 (60%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD N +I+ + +G ++ V+ REI + ++ SA SII+ HNHPSG+P PS DIN+ Sbjct: 133 LDTKNKVISKKEIFKGGLNSSLVHPREIFKEAVKDSAASIIICHNHPSGDPTPSRDDINI 192 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + + I + DH+IIG + F+S K I+ Sbjct: 193 TTRLKECGKMMGIELLDHLIIGDNRFISLKEKDIL 227 >gi|330941093|gb|EGH43995.1| hypothetical protein PSYPI_16995 [Pseudomonas syringae pv. pisi str. 1704B] Length = 153 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ RGTI+ V+ R++V+R + +A S+IL HNHPSG PS +DI Sbjct: 57 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 116 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ V DH+I+G +S ++ Sbjct: 117 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVERGLM 153 >gi|307272661|ref|ZP_07553909.1| DNA repair protein RadC [Enterococcus faecalis TX0855] gi|306510656|gb|EFM79678.1| DNA repair protein RadC [Enterococcus faecalis TX0855] Length = 240 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 201 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 236 >gi|148266148|ref|YP_001232854.1| DNA repair protein RadC [Geobacter uraniireducens Rf4] gi|189029395|sp|A5G913|Y4138_GEOUR RecName: Full=UPF0758 protein Gura_4138 gi|146399648|gb|ABQ28281.1| DNA replication and repair protein RadC [Geobacter uraniireducens Rf4] Length = 228 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N ++ S G+++ V+ RE+ + + SA +IILVHNHP+G+P PS DI Sbjct: 132 LLLDGKNRILKRVQISEGSLNQSIVHPREVFNQAVRESAAAIILVHNHPTGDPTPSREDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + L I V DHIIIG +F+SF ++ Sbjct: 192 DITRRLREAGDLLGIKVLDHIIIGDGSFLSFVDRGMM 228 >gi|114569594|ref|YP_756274.1| DNA repair protein RadC [Maricaulis maris MCS10] gi|114340056|gb|ABI65336.1| DNA repair protein RadC [Maricaulis maris MCS10] Length = 226 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 53/97 (54%), Positives = 68/97 (70%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADEV GTIDH PVY RE+V+ L A++IILVHNHPSG+ PS ADI Sbjct: 130 LFLDRKNKLIADEVLGEGTIDHAPVYPREVVKSALAHEASAIILVHNHPSGDATPSQADI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ ++ P I VHDH++IG++ SFK L ++ Sbjct: 190 EMTRTLMEICKPFEIAVHDHLVIGRENTASFKTLGLM 226 >gi|253576954|ref|ZP_04854278.1| DNA repair protein RadC [Paenibacillus sp. oral taxon 786 str. D14] gi|251843685|gb|EES71709.1| DNA repair protein RadC [Paenibacillus sp. oral taxon 786 str. D14] Length = 162 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +++ EV S GT++ V+ RE+ + + A SII VHNHPSG+P PS D Sbjct: 66 LILNTKNRILSKEVISIGTLNSAIVHPREVFKPAIIKGAASIICVHNHPSGDPAPSSEDK 125 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I + I V DH++IG + +VS K +I Sbjct: 126 KLTERLIQAGEIIGIDVLDHVVIGTEGYVSLKEQGMI 162 >gi|119475390|ref|ZP_01615743.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2143] gi|119451593|gb|EAW32826.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2143] Length = 224 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA + GTID +Y RE+V+ C++ +A ++I HNHPSG PS AD Sbjct: 128 LFLDSQHRVIAFDTLFYGTIDAACIYPREVVRCCMQHNAAAVIFAHNHPSGIAEPSQADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I L +++ V DH ++G VSF ++ Sbjct: 188 QITRRLIDALVLIDVRVLDHFVVGDGVLVSFAERGLL 224 >gi|328957163|ref|YP_004374549.1| DNA repair protein RadC [Carnobacterium sp. 17-4] gi|328673487|gb|AEB29533.1| DNA repair protein RadC [Carnobacterium sp. 17-4] Length = 230 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 36/95 (37%), Positives = 54/95 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I E G ++ + REI + + SA +I+ HNHPSGNP PS+ADI Sbjct: 134 LYLNTKNEIIKKETIFIGGLNSSIAHPREIFKGAVRYSAARMIVGHNHPSGNPEPSEADI 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 T+ + + I + DHIIIG+ F+S K + Sbjct: 194 QFTRRMSECGELMGIDLLDHIIIGEHEFISLKEIG 228 >gi|167465896|ref|ZP_02330985.1| RadC [Paenibacillus larvae subsp. larvae BRL-230010] Length = 145 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N ++A E S G+++ V+ RE+ + ++ S+ SII VHNHPSGNP PS DI Sbjct: 49 LFLNTKNQVLAKETMSIGSLNASIVHPREVFRAAIKRSSASIICVHNHPSGNPTPSLDDI 108 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ +I + I V DHIIIG A+VS K + Sbjct: 109 DITQRLIEAGAIIGIDVLDHIIIGDKAYVSLKEQGYM 145 >gi|117620845|ref|YP_855621.1| putative DNA repair protein RadC [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562252|gb|ABK39200.1| putative DNA repair protein RadC [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 176 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A E GT+ VY R++V++ L +A +++LVHNHPSG P PS ADI Sbjct: 80 LFLDNQHRVLAYEELFLGTLSAATVYPRDVVKQALHYNAAALMLVHNHPSGYPEPSRADI 139 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L ++I + DH+++G + VS +I Sbjct: 140 AITLRLQNALALVDIRILDHLVVGTEGVVSLAERGLI 176 >gi|229593348|ref|YP_002875467.1| DNA repair protein RadC [Pseudomonas fluorescens SBW25] gi|259551894|sp|C3K471|Y5982_PSEFS RecName: Full=UPF0758 protein PFLU_5982 gi|229365214|emb|CAY53505.1| DNA repair protein [Pseudomonas fluorescens SBW25] Length = 224 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E S+GTID VY R++V+R L +A ++IL HNHPSG+ PS AD Sbjct: 128 LFLDSRHRVLGFEALSQGTIDAAMVYPRQVVKRALAYNAAALILCHNHPSGSLEPSAADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DHII+G +S + Sbjct: 188 KLTKLLQKALEVVDVRVLDHIIVGDGDPLSMAEYGWL 224 >gi|253991844|ref|YP_003043200.1| DNA repair protein RadC [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783294|emb|CAQ86459.1| dna repair protein radc [Photorhabdus asymbiotica] Length = 230 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I E +GTI+ V V+ REIV+ ++++A+SIIL HNHPSG+ PS AD Sbjct: 134 LFLNNQNKVICHEEMFKGTINKVEVHPREIVRSAIKVNASSIILAHNHPSGHAEPSLADK 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I N + I V DH++IG+ VSF I Sbjct: 194 IVTDKVIDACNLVGIQVLDHLVIGRQCCVSFAERGWI 230 >gi|168205621|ref|ZP_02631626.1| DNA repair protein, RadC family [Clostridium perfringens E str. JGS1987] gi|169344220|ref|ZP_02865202.1| DNA repair protein, RadC family [Clostridium perfringens C str. JGS1495] gi|169297679|gb|EDS79779.1| DNA repair protein, RadC family [Clostridium perfringens C str. JGS1495] gi|170662943|gb|EDT15626.1| DNA repair protein, RadC family [Clostridium perfringens E str. JGS1987] Length = 227 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 57/95 (60%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD N +I+ + +G ++ V+ REI + ++ SA SII+ HNHPSG+P PS DIN+ Sbjct: 133 LDTKNKVISKKEIFKGGLNSSLVHPREIFREAVKDSAASIIICHNHPSGDPTPSRDDINI 192 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + + I + DH+IIG + F+S K I+ Sbjct: 193 TTRLKECGKMMGIELLDHLIIGDNRFISLKEKDIL 227 >gi|39997266|ref|NP_953217.1| DNA repair protein RadC [Geobacter sulfurreducens PCA] gi|39984156|gb|AAR35544.1| DNA repair protein RadC [Geobacter sulfurreducens PCA] Length = 163 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N ++ + S G+++ V+ RE+ + +A +I+LVHNHP+G+PNPS DI Sbjct: 67 LHLDGKNRIVCFDRVSIGSLNQAIVHPREVFKTACLSNAAAILLVHNHPTGDPNPSSEDI 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + L I V DHII+G D F+SF ++ Sbjct: 127 AITKRLKESGDILGIRVLDHIIVGDDEFLSFVEQGLL 163 >gi|30995411|ref|NP_439113.2| DNA repair protein RadC [Haemophilus influenzae Rd KW20] gi|38372879|sp|P44952|Y952_HAEIN RecName: Full=UPF0758 protein HI_0952 Length = 221 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 125 LFLDNQHRLIKKERLFLGTIYVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 185 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 221 >gi|302037875|ref|YP_003798197.1| DNA repair protein RadC-like protein [Candidatus Nitrospira defluvii] gi|300605939|emb|CBK42272.1| DNA repair protein RadC homolog [Candidatus Nitrospira defluvii] Length = 238 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N +I D S G++ V+ RE+ + SA +I +HNHPSG+P PS D Sbjct: 135 VLLDAKNQVIRDVTISEGSLTLSIVHPREVFIPAMRASAAGVIFLHNHPSGDPTPSQEDR 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +++ + L I V DH+I+G +VSF + Sbjct: 195 VLTARLVSAGSLLGIQVLDHLIVGDGRYVSFADQGWL 231 >gi|77361558|ref|YP_341133.1| associated with replication fork DNA repair protein [Pseudoalteromonas haloplanktis TAC125] gi|123587696|sp|Q3IFE5|Y2643_PSEHT RecName: Full=UPF0758 protein PSHAa2643 gi|76876469|emb|CAI87691.1| associated with replication fork DNA repair protein [Pseudoalteromonas haloplanktis TAC125] Length = 224 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LI DE+ GTI+ VY RE+V+ L+ +A ++I HNHPSG PS AD Sbjct: 128 LYLDSQNRLIKDEILFYGTINSASVYPREVVKAALKNNAAAVIFAHNHPSGIAEPSQADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L ++I V DHII+G + VSF +I Sbjct: 188 LITNKLQQALQLVDINVLDHIIVGGETCVSFAERGLI 224 >gi|257874771|ref|ZP_05654424.1| DNA repair protein RadC [Enterococcus casseliflavus EC20] gi|257808937|gb|EEV37757.1| DNA repair protein RadC [Enterococcus casseliflavus EC20] Length = 230 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ + REI + SA +I+VHNHPSG+P S+AD+ Sbjct: 129 LYLNTKNEIIQKKTIFIGSLNQSIAHPREIFHWAVRYSAARVIVVHNHPSGSPQASEADL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ +I + + I + DH+IIG +A+VS + + Sbjct: 189 LFTRRLIKCGDLMGIDILDHLIIGDNAYVSLREEGL 224 >gi|257865156|ref|ZP_05644809.1| DNA repair protein RadC [Enterococcus casseliflavus EC30] gi|257871480|ref|ZP_05651133.1| DNA repair protein RadC [Enterococcus casseliflavus EC10] gi|257799090|gb|EEV28142.1| DNA repair protein RadC [Enterococcus casseliflavus EC30] gi|257805644|gb|EEV34466.1| DNA repair protein RadC [Enterococcus casseliflavus EC10] Length = 230 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ + REI + SA +I+VHNHPSG+P S+AD+ Sbjct: 129 LYLNTKNEIIQKKTIFIGSLNQSIAHPREIFHWAVRYSAARVIVVHNHPSGSPQASEADL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ +I + + I + DH+IIG +A+VS + + Sbjct: 189 LFTRRLIKCGDLMGIDILDHLIIGDNAYVSLREEGL 224 >gi|121595744|ref|YP_987640.1| DNA repair protein RadC [Acidovorax sp. JS42] gi|171769520|sp|A1WBD9|Y3450_ACISJ RecName: Full=UPF0758 protein Ajs_3450 gi|120607824|gb|ABM43564.1| DNA replication and repair protein RadC [Acidovorax sp. JS42] Length = 238 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIA E RGT+ VY RE+V R L A +++L HNHPSG+ PS AD Sbjct: 142 LFLDSGNRLIAMEELFRGTLTQTSVYPREVVLRALHHHAAAVVLAHNHPSGSVQPSRADE 201 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH+I+ A +S ++ Sbjct: 202 ALTQTLKAALALVDVRVLDHVIVAPGAALSMAEQGLV 238 >gi|307278557|ref|ZP_07559629.1| DNA repair protein RadC [Enterococcus faecalis TX0860] gi|306504794|gb|EFM73992.1| DNA repair protein RadC [Enterococcus faecalis TX0860] Length = 240 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 201 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 236 >gi|229547599|ref|ZP_04436324.1| DNA repair protein RadC [Enterococcus faecalis TX1322] gi|229548193|ref|ZP_04436918.1| DNA repair protein RadC [Enterococcus faecalis ATCC 29200] gi|307275090|ref|ZP_07556244.1| DNA repair protein RadC [Enterococcus faecalis TX2134] gi|307287379|ref|ZP_07567438.1| DNA repair protein RadC [Enterococcus faecalis TX0109] gi|312952214|ref|ZP_07771092.1| DNA repair protein RadC [Enterococcus faecalis TX0102] gi|229306672|gb|EEN72668.1| DNA repair protein RadC [Enterococcus faecalis ATCC 29200] gi|229307289|gb|EEN73276.1| DNA repair protein RadC [Enterococcus faecalis TX1322] gi|306501552|gb|EFM70848.1| DNA repair protein RadC [Enterococcus faecalis TX0109] gi|306508208|gb|EFM77324.1| DNA repair protein RadC [Enterococcus faecalis TX2134] gi|310629870|gb|EFQ13153.1| DNA repair protein RadC [Enterococcus faecalis TX0102] gi|315028140|gb|EFT40072.1| DNA repair protein RadC [Enterococcus faecalis TX2137] gi|315030879|gb|EFT42811.1| DNA repair protein RadC [Enterococcus faecalis TX4000] gi|315032296|gb|EFT44228.1| DNA repair protein RadC [Enterococcus faecalis TX0017] gi|315036225|gb|EFT48157.1| DNA repair protein RadC [Enterococcus faecalis TX0027] gi|315148798|gb|EFT92814.1| DNA repair protein RadC [Enterococcus faecalis TX4244] gi|315154537|gb|EFT98553.1| DNA repair protein RadC [Enterococcus faecalis TX0031] gi|315160102|gb|EFU04119.1| DNA repair protein RadC [Enterococcus faecalis TX0312] gi|315163278|gb|EFU07295.1| DNA repair protein RadC [Enterococcus faecalis TX0645] gi|315165917|gb|EFU09934.1| DNA repair protein RadC [Enterococcus faecalis TX1302] gi|315169324|gb|EFU13341.1| DNA repair protein RadC [Enterococcus faecalis TX1341] gi|315171821|gb|EFU15838.1| DNA repair protein RadC [Enterococcus faecalis TX1342] gi|327536079|gb|AEA94913.1| DNA repair protein RadC [Enterococcus faecalis OG1RF] Length = 240 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 201 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 236 >gi|300714649|ref|YP_003739452.1| DNA repair protein RadC [Erwinia billingiae Eb661] gi|299060485|emb|CAX57592.1| DNA repair protein RadC [Erwinia billingiae Eb661] Length = 222 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 54/96 (56%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FLD + +I GT++ V V+ REIV+ L +A ++IL HNHPSG PS AD Sbjct: 127 FLDNQHRMIHACEMFAGTLNSVEVHPREIVKEALAKNAAALILAHNHPSGVARPSRADHQ 186 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ +NI V DHI+IG VSF I Sbjct: 187 VTRRIVAACQLMNIHVLDHIVIGHGESVSFAERGWI 222 >gi|187933370|ref|YP_001884766.1| DNA repair protein RadC [Clostridium botulinum B str. Eklund 17B] gi|238691627|sp|B2TK55|Y562_CLOBB RecName: Full=UPF0758 protein CLL_A0562 gi|187721523|gb|ACD22744.1| DNA repair protein RadC [Clostridium botulinum B str. Eklund 17B] Length = 229 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ NI+I + +G+++ V+ REI + + S+ II+ HNHPSG+P PS DI Sbjct: 133 IFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSAKIIISHNHPSGDPTPSKEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T I + I + DHIIIGK+ F+S K I Sbjct: 193 NITLRIKECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229 >gi|126172629|ref|YP_001048778.1| DNA repair protein RadC [Shewanella baltica OS155] gi|160873513|ref|YP_001552829.1| DNA repair protein RadC [Shewanella baltica OS195] gi|217971608|ref|YP_002356359.1| DNA repair protein RadC [Shewanella baltica OS223] gi|304411668|ref|ZP_07393280.1| DNA repair protein RadC [Shewanella baltica OS183] gi|307306280|ref|ZP_07586025.1| DNA repair protein RadC [Shewanella baltica BA175] gi|166218793|sp|A3CZJ6|Y377_SHEB5 RecName: Full=UPF0758 protein Sbal_0377 gi|189029402|sp|A9KY04|Y388_SHEB9 RecName: Full=UPF0758 protein Sbal195_0388 gi|254789658|sp|B8E4J5|Y402_SHEB2 RecName: Full=UPF0758 protein Sbal223_0402 gi|125995834|gb|ABN59909.1| DNA repair protein RadC [Shewanella baltica OS155] gi|160859035|gb|ABX47569.1| DNA repair protein RadC [Shewanella baltica OS195] gi|217496743|gb|ACK44936.1| DNA repair protein RadC [Shewanella baltica OS223] gi|304349856|gb|EFM14262.1| DNA repair protein RadC [Shewanella baltica OS183] gi|306911153|gb|EFN41580.1| DNA repair protein RadC [Shewanella baltica BA175] gi|315265742|gb|ADT92595.1| DNA repair protein RadC [Shewanella baltica OS678] Length = 225 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY RE+V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|254430046|ref|ZP_05043753.1| DNA repair protein RadC [Alcanivorax sp. DG881] gi|196196215|gb|EDX91174.1| DNA repair protein RadC [Alcanivorax sp. DG881] Length = 164 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ + +++ E GTID VY R IVQ+ L +A ++I HNHPSG PS AD Sbjct: 68 IFLNNKHKVLSFETLFTGTIDGAAVYPRVIVQQALACNAAAVIFSHNHPSGCCEPSRADQ 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH ++ + +VS ++ Sbjct: 128 QITKRLTDALALIDVRVLDHFVVSRSEWVSLAERGMV 164 >gi|319654832|ref|ZP_08008908.1| hypothetical protein HMPREF1013_05530 [Bacillus sp. 2_A_57_CT2] gi|317393550|gb|EFV74312.1| hypothetical protein HMPREF1013_05530 [Bacillus sp. 2_A_57_CT2] Length = 218 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N++I + +G+++ V+ REI + ++LSA SII HNHPSG+P PS DI Sbjct: 121 LFLNSKNVVIGRKTIFKGSLNASIVHPREIFREAVKLSAASIIAGHNHPSGDPYPSREDI 180 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRI 96 +T+ + + I + DHIIIG F S K Sbjct: 181 EVTKRLSEAGKLVGIDLLDHIIIGHHGNFTSLKEKGY 217 >gi|237797777|ref|ZP_04586238.1| hypothetical protein POR16_02922 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020627|gb|EGI00684.1| hypothetical protein POR16_02922 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 224 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ RGTI+ V+ R++V+R L +A S+IL HNHPSG PS +DI Sbjct: 128 LFLDNKHRVMNFEILFRGTINASYVHPRQVVKRALAHNAASLILCHNHPSGITTPSRSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ V DH+I+G +S ++ Sbjct: 188 DLTKRLKEALLLVDVHVLDHVIVGDGEPLSMVERGLM 224 >gi|66043492|ref|YP_233333.1| DNA repair protein RadC [Pseudomonas syringae pv. syringae B728a] gi|75503901|sp|Q4ZZX7|Y222_PSEU2 RecName: Full=UPF0758 protein Psyr_0222 gi|63254199|gb|AAY35295.1| DNA repair protein RadC [Pseudomonas syringae pv. syringae B728a] gi|330972197|gb|EGH72263.1| hypothetical protein PSYAR_17040 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 224 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ RGTI+ V+ R++V+R + +A S+IL HNHPSG PS +DI Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ V DH+I+G +S ++ Sbjct: 188 DLTKRLKEALLLVDVHVLDHVIVGDGEPLSMVERGLM 224 >gi|49474229|ref|YP_032271.1| DNA repair protein radC [Bartonella quintana str. Toulouse] gi|49239733|emb|CAF26115.1| DNA repair protein radC [Bartonella quintana str. Toulouse] Length = 264 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N L+ADEVQ GTIDH PVY RE++ R L+LSA+ +ILVHNHPSG+ +PS+ADI Sbjct: 168 LFLDKKNGLLADEVQQTGTIDHTPVYPREVISRALQLSASGLILVHNHPSGDSSPSEADI 227 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + N L I VHDH+IIG++ + SFK L+ I Sbjct: 228 TMTHRLKDAANALGITVHDHLIIGRNNYTSFKALKFI 264 >gi|300310517|ref|YP_003774609.1| DNA repair RadC-like protein [Herbaspirillum seropedicae SmR1] gi|300073302|gb|ADJ62701.1| DNA repair RadC-like protein [Herbaspirillum seropedicae SmR1] Length = 224 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LI E +GT+ VY RE+++ L +A S+IL HNHPSG+P PSD D+ Sbjct: 128 LFLDVRNKLIGTEELFKGTLTQSAVYPREVIKAALRHNAASVILAHNHPSGDPEPSDHDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T + L ++I + DH ++ SF Sbjct: 188 RLTAALDEALQMMDIRLLDHFVVAGTRLYSFADHG 222 >gi|288553589|ref|YP_003425524.1| DNA repair protein RadC [Bacillus pseudofirmus OF4] gi|288544749|gb|ADC48632.1| DNA repair protein RadC [Bacillus pseudofirmus OF4] Length = 230 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I G+++ V+ RE+ + L SA SII +HNHPSG+P PS DI Sbjct: 133 LYLNTKNRVIHRHTLFIGSLNASIVHPREVFKEALRRSAASIICLHNHPSGDPTPSLEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L + + DH+IIG F+S K I Sbjct: 193 EVTKRLNEAGKVLGVELLDHVIIGDRKFISLKEQGHI 229 >gi|258511792|ref|YP_003185226.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478518|gb|ACV58837.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 233 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + ++A++ S G++D V+ REI +R + +SA+SI+ +HNHPSG+P+PS DI Sbjct: 133 LLLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSPSPEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I V DHI+IG FVS + + Sbjct: 193 AVTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229 >gi|260893389|ref|YP_003239486.1| DNA repair protein RadC [Ammonifex degensii KC4] gi|260865530|gb|ACX52636.1| DNA repair protein RadC [Ammonifex degensii KC4] Length = 232 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N L+ E + G ++ V RE+ + + SA ++ILVHNHPSG+P PS D+ Sbjct: 136 ILLDTKNQLLGIETVAVGGLNSAGVLPREVFRAAVRRSACALILVHNHPSGDPTPSGEDL 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ ++ + L I V DH+IIG + +VS K + Sbjct: 196 ALTRRLVQAGDLLGIEVLDHLIIGDNCYVSLKEANL 231 >gi|120597169|ref|YP_961743.1| DNA repair protein RadC [Shewanella sp. W3-18-1] gi|146291569|ref|YP_001181993.1| DNA repair protein RadC [Shewanella putrefaciens CN-32] gi|166218795|sp|A4Y2L1|Y462_SHEPC RecName: Full=UPF0758 protein Sputcn32_0462 gi|166218797|sp|A1REU4|Y338_SHESW RecName: Full=UPF0758 protein Sputw3181_0338 gi|120557262|gb|ABM23189.1| DNA repair protein RadC [Shewanella sp. W3-18-1] gi|145563259|gb|ABP74194.1| DNA repair protein RadC [Shewanella putrefaciens CN-32] gi|319424742|gb|ADV52816.1| DNA repair protein RadC [Shewanella putrefaciens 200] Length = 225 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY RE+V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|309751380|gb|ADO81364.1| Conserved hypothetical protein [Haemophilus influenzae R2866] Length = 221 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + + I V DH+I+GK SF ++ Sbjct: 185 LITKKIQESAELMEIRVLDHLIVGKTDCYSFAENFLL 221 >gi|315156406|gb|EFU00423.1| DNA repair protein RadC [Enterococcus faecalis TX0043] Length = 240 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 201 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 236 >gi|293382175|ref|ZP_06628118.1| DNA repair protein RadC [Enterococcus faecalis R712] gi|293388514|ref|ZP_06633018.1| DNA repair protein RadC [Enterococcus faecalis S613] gi|312905730|ref|ZP_07764752.1| DNA repair protein RadC [Enterococcus faecalis DAPTO 512] gi|312909075|ref|ZP_07767935.1| DNA repair protein RadC [Enterococcus faecalis DAPTO 516] gi|291080458|gb|EFE17822.1| DNA repair protein RadC [Enterococcus faecalis R712] gi|291082118|gb|EFE19081.1| DNA repair protein RadC [Enterococcus faecalis S613] gi|310628209|gb|EFQ11492.1| DNA repair protein RadC [Enterococcus faecalis DAPTO 512] gi|311290637|gb|EFQ69193.1| DNA repair protein RadC [Enterococcus faecalis DAPTO 516] Length = 240 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 201 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 236 >gi|289209451|ref|YP_003461517.1| DNA repair protein RadC [Thioalkalivibrio sp. K90mix] gi|288945082|gb|ADC72781.1| DNA repair protein RadC [Thioalkalivibrio sp. K90mix] Length = 242 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA E RGTID V+ RE+V+R L +A ++IL HNHPSG PS +DI Sbjct: 147 LFLDNRHRVIAFEELFRGTIDGAAVHPREVVRRVLHHNAAAVILAHNHPSGVAEPSGSDI 206 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH++I VS ++ Sbjct: 207 AITRRLTEALGLVDVRILDHVVIAD-TPVSMAERGLL 242 >gi|149202958|ref|ZP_01879929.1| DNA repair protein RadC [Roseovarius sp. TM1035] gi|149143504|gb|EDM31540.1| DNA repair protein RadC [Roseovarius sp. TM1035] Length = 251 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 56/96 (58%), Positives = 75/96 (78%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD+ NILIADE Q+RGTIDHVPVY RE+V+R L L+A+++ILVHNHPSG+P PS ADI+ Sbjct: 156 YLDRKNILIADEEQARGTIDHVPVYPREVVKRALHLNASALILVHNHPSGDPTPSAADIS 215 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + T L + +HDHI+IGK + VSF+ + Sbjct: 216 MTRQVQTAAEALGLTLHDHIVIGKSSEVSFRSSGFL 251 >gi|145638225|ref|ZP_01793835.1| DNA repair protein RadC [Haemophilus influenzae PittII] gi|145272554|gb|EDK12461.1| DNA repair protein RadC [Haemophilus influenzae PittII] Length = 214 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 118 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + + I V DH+I+GK SF ++ Sbjct: 178 LITKKIQESAELMEIRVLDHLIVGKTDCYSFAENFLL 214 >gi|90422099|ref|YP_530469.1| DNA repair protein RadC [Rhodopseudomonas palustris BisB18] gi|90104113|gb|ABD86150.1| DNA repair protein RadC [Rhodopseudomonas palustris BisB18] Length = 242 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 65/97 (67%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADE+Q GTIDH PVY REIV+R LELSAT+II+VHNHPSG+P PS +DI Sbjct: 146 LFLDKRNQLIADELQQVGTIDHTPVYPREIVKRALELSATAIIMVHNHPSGDPTPSQSDI 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ II PL I VHDHII+GK S KGL++I Sbjct: 206 TMTKQIIDIAKPLGIAVHDHIIVGKHGHASLKGLKLI 242 >gi|83858758|ref|ZP_00952280.1| DNA repair protein [Oceanicaulis alexandrii HTCC2633] gi|83853581|gb|EAP91433.1| DNA repair protein [Oceanicaulis alexandrii HTCC2633] Length = 213 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 56/97 (57%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LDK N L+ADE Q+RGT+DH PVY RE+V+R L L A+++ILVHNHPSG+P PS ADI Sbjct: 117 LYLDKKNRLVADEHQARGTVDHAPVYPREVVKRALALDASALILVHNHPSGDPTPSHADI 176 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ +I+ P NI+VHDH++IG++ SFK L ++ Sbjct: 177 EMTKLVISAAKPFNIVVHDHLVIGRERTASFKSLGLL 213 >gi|317154521|ref|YP_004122569.1| DNA repair protein RadC [Desulfovibrio aespoeensis Aspo-2] gi|316944772|gb|ADU63823.1| DNA repair protein RadC [Desulfovibrio aespoeensis Aspo-2] Length = 227 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 57/96 (59%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 F+D N +IA E S+GT+D PV+ REI+ L L A ++IL HNHP G+P PS D++ Sbjct: 132 FMDSKNRVIAWEQVSKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPTPSREDLD 191 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I T L I + DHII+ + SF + Sbjct: 192 LTRRIRDTAQGLGIRILDHIIVTDHEYYSFNEHGRL 227 >gi|317493712|ref|ZP_07952129.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918039|gb|EFV39381.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA] Length = 159 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N L+A E G+I V+ RE+V+R L +A ++IL HNHPSG+ PS +D Sbjct: 63 LYLNHQNQLLAWETLFTGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDIAPSQSDK 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ +I L +++ V DH I+G SF ++ Sbjct: 123 VITQRLIQALGLVDVRVLDHFIVGGRHIASFAENGLL 159 >gi|187731500|ref|YP_001882335.1| DNA repair protein RadC [Shigella boydii CDC 3083-94] gi|238691678|sp|B2TTV2|YICR_SHIB3 RecName: Full=UPF0758 protein yicR gi|187428492|gb|ACD07766.1| DNA repair protein RadC [Shigella boydii CDC 3083-94] Length = 222 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ VSF I Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGENVSFAERGWI 222 >gi|330720900|gb|EGG99083.1| DNA repair protein RadC [gamma proteobacterium IMCC2047] Length = 97 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + LI + GTID VY RE+V+ +E +A ++IL HNHPSG PS AD Sbjct: 1 MYLDSQHRLIRYQPHFYGTIDSASVYPRELVKSAIEYNAAAVILAHNHPSGVAEPSQADR 60 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + ++ + + V DH+++G VSF + Sbjct: 61 QITEQVRKAMSLIGVRVLDHMVVGDSEVVSFAERGWL 97 >gi|119773468|ref|YP_926208.1| DNA repair protein RadC [Shewanella amazonensis SB2B] gi|166218792|sp|A1S2D2|Y327_SHEAM RecName: Full=UPF0758 protein Sama_0327 gi|119765968|gb|ABL98538.1| DNA repair protein RadC [Shewanella amazonensis SB2B] Length = 225 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY RE+V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTIDAASVYPRELVSLVLEKRAAAVIVCHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|118593437|ref|ZP_01550817.1| DNA repair protein RadC [Stappia aggregata IAM 12614] gi|118433916|gb|EAV40574.1| DNA repair protein RadC [Stappia aggregata IAM 12614] Length = 237 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 62/97 (63%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+++R LELSAT++ILVHNHPSG+P PS ADI Sbjct: 141 LFLDKKNALIADEVQQTGTVDHTPVYPREVIRRALELSATALILVHNHPSGDPTPSRADI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I+ PL I VHDHII+G + VSF+ L++I Sbjct: 201 QMTKKIVDIAGPLGIEVHDHIIVGLRSNVSFRSLQLI 237 >gi|56475704|ref|YP_157293.1| RadC family DNA repair protein [Aromatoleum aromaticum EbN1] gi|56311747|emb|CAI06392.1| DNA repair protein similar to radC family [Aromatoleum aromaticum EbN1] Length = 196 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LI E RGT+ VY REIV+R LEL A +I H HPSG PS AD Sbjct: 100 LYLNARNHLILAEEAFRGTLTQTSVYPREIVRRALELRAAGVIFSHQHPSGACEPSLADE 159 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L + + V DH ++ + VSF ++ Sbjct: 160 LLTRTLTSALAMVEVRVLDHFVVAGHSTVSFAERGLL 196 >gi|206890013|ref|YP_002248228.1| DNA repair protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741951|gb|ACI21008.1| DNA repair protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 224 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 55/95 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD LI + S GT++ ++ RE+ + ++ SA ++IL+HNHPSG+P PS+ DI Sbjct: 128 LLLDTKLRLIREVKVSEGTLNQSLIHPREVFKDAVKESAYAVILIHNHPSGDPTPSEQDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + L I + DH+IIG + S K Sbjct: 188 EITKKLKKASEILEIPILDHVIIGSGKYFSMKERG 222 >gi|293400888|ref|ZP_06645033.1| DNA repair protein RadC [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305914|gb|EFE47158.1| DNA repair protein RadC [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 225 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N ++ GT+ V+ REI + ++ II VHNHPSG+ PSDADI Sbjct: 128 LFLDQRNHVLCYRTMFMGTLTSASVHPREIFKEAMQQGCAKIICVHNHPSGDATPSDADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I + DHII+ ++ ++SF+ R++ Sbjct: 188 TLTKAIQEAGKMVAIPLIDHIIVARNTYISFRQKRLM 224 >gi|255970845|ref|ZP_05421431.1| DNA repair protein RadC [Enterococcus faecalis T1] gi|256761220|ref|ZP_05501800.1| DNA repair protein RadC [Enterococcus faecalis T3] gi|255961863|gb|EET94339.1| DNA repair protein RadC [Enterococcus faecalis T1] gi|256682471|gb|EEU22166.1| DNA repair protein RadC [Enterococcus faecalis T3] Length = 227 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 128 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 188 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 223 >gi|89902021|ref|YP_524492.1| DNA repair protein RadC [Rhodoferax ferrireducens T118] gi|122478527|sp|Q21TE2|Y3252_RHOFD RecName: Full=UPF0758 protein Rfer_3252 gi|89346758|gb|ABD70961.1| DNA repair protein RadC [Rhodoferax ferrireducens T118] Length = 234 Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N L+A E RGT+ VY RE+V R L A+S++L HNHPSG PS AD Sbjct: 138 LFLDVQNRLLALEELFRGTLTQTSVYPREVVLRALHHQASSVVLAHNHPSGTVQPSRADE 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + TTL +++ V DH+I+ +S ++ Sbjct: 198 MLTQTLKTTLALIDVRVLDHVIVAPGEALSMAERGLL 234 >gi|255974420|ref|ZP_05425006.1| DNA repair protein RadC [Enterococcus faecalis T2] gi|255967292|gb|EET97914.1| DNA repair protein RadC [Enterococcus faecalis T2] Length = 227 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 128 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 188 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 223 >gi|313903989|ref|ZP_07837369.1| DNA repair protein RadC [Eubacterium cellulosolvens 6] gi|313471138|gb|EFR66460.1| DNA repair protein RadC [Eubacterium cellulosolvens 6] Length = 236 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N L+ + SRGT++ + RE+ L A S+ILVHNHPSG+P+PS D Sbjct: 136 VMLDTKNHLLGEAEISRGTVNQSLISPRELFLSALSFHAVSVILVHNHPSGDPSPSGDDQ 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ I L I + DHIIIG + SF ++ Sbjct: 196 DVTERIRCAGELLGIRLVDHIIIGDGEYFSFMEHGLL 232 >gi|254439250|ref|ZP_05052744.1| DNA repair protein RadC [Octadecabacter antarcticus 307] gi|198254696|gb|EDY79010.1| DNA repair protein RadC [Octadecabacter antarcticus 307] Length = 266 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+LIADE Q GT+DHVPVY RE+V+R LEL+A+S+ILVHNHPSG+P PS+ DI Sbjct: 170 LFLDRKNVLIADEAQGNGTVDHVPVYPREVVKRALELNASSLILVHNHPSGDPTPSNEDI 229 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I LNI +HDH+IIG+ +SFK +I Sbjct: 230 AMTMQIHDAAKALNISLHDHLIIGRSRELSFKSQGLI 266 >gi|218290834|ref|ZP_03494903.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius LAA1] gi|218239192|gb|EED06393.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius LAA1] Length = 233 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + ++A++ S G++D V+ REI +R + +SA+SI+ +HNHPSG+P+PS DI Sbjct: 133 LLLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSPSPEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I V DHI+IG FVS + + Sbjct: 193 AVTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229 >gi|293392460|ref|ZP_06636780.1| DNA repair protein RadC [Serratia odorifera DSM 4582] gi|291424862|gb|EFE98071.1| DNA repair protein RadC [Serratia odorifera DSM 4582] Length = 159 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+A E GTI+ V+ RE+V+ ++ +A S +L HNHPS PS AD Sbjct: 63 LWLDNQNRLLAQETLFTGTINSTTVHPRELVKSAMKHNAASAVLAHNHPSQLAEPSQADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I T L +++ V DH+++G VSF + Sbjct: 123 QITDRIKTALQLVDVRVVDHLVVGGLDIVSFAERGWL 159 >gi|146306213|ref|YP_001186678.1| DNA repair protein RadC [Pseudomonas mendocina ymp] gi|145574414|gb|ABP83946.1| DNA repair protein RadC [Pseudomonas mendocina ymp] Length = 165 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I+ E RGT+D VY RE+V+ L +A ++ILVHNHPSG+P+PS ADI Sbjct: 69 LLLDSKHRVISFEELFRGTLDAASVYPREVVKTVLAHNAAAVILVHNHPSGDPSPSQADI 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L + DH I+G + VS ++ Sbjct: 129 RLTQTLKNALVMVGTTTLDHFIVGSEGIVSLAEQGLL 165 >gi|227518208|ref|ZP_03948257.1| DNA repair protein RadC [Enterococcus faecalis TX0104] gi|256618290|ref|ZP_05475136.1| DNA repair protein RadC [Enterococcus faecalis ATCC 4200] gi|256852483|ref|ZP_05557859.1| DNA repair protein RadC [Enterococcus faecalis T8] gi|256958161|ref|ZP_05562332.1| DNA repair protein RadC [Enterococcus faecalis DS5] gi|257077434|ref|ZP_05571795.1| DNA repair protein RadC [Enterococcus faecalis JH1] gi|257088067|ref|ZP_05582428.1| DNA repair protein RadC [Enterococcus faecalis D6] gi|257091146|ref|ZP_05585507.1| DNA repair protein radC [Enterococcus faecalis CH188] gi|257417093|ref|ZP_05594087.1| DNA repair protein RadC [Enterococcus faecalis AR01/DG] gi|257417807|ref|ZP_05594801.1| DNA repair protein radC [Enterococcus faecalis T11] gi|294779645|ref|ZP_06745036.1| DNA repair protein RadC [Enterococcus faecalis PC1.1] gi|300860938|ref|ZP_07107025.1| DNA repair protein RadC [Enterococcus faecalis TUSoD Ef11] gi|227074364|gb|EEI12327.1| DNA repair protein RadC [Enterococcus faecalis TX0104] gi|256597817|gb|EEU16993.1| DNA repair protein RadC [Enterococcus faecalis ATCC 4200] gi|256712337|gb|EEU27369.1| DNA repair protein RadC [Enterococcus faecalis T8] gi|256948657|gb|EEU65289.1| DNA repair protein RadC [Enterococcus faecalis DS5] gi|256985464|gb|EEU72766.1| DNA repair protein RadC [Enterococcus faecalis JH1] gi|256996097|gb|EEU83399.1| DNA repair protein RadC [Enterococcus faecalis D6] gi|256999958|gb|EEU86478.1| DNA repair protein radC [Enterococcus faecalis CH188] gi|257158921|gb|EEU88881.1| DNA repair protein RadC [Enterococcus faecalis ARO1/DG] gi|257159635|gb|EEU89595.1| DNA repair protein radC [Enterococcus faecalis T11] gi|294453302|gb|EFG21713.1| DNA repair protein RadC [Enterococcus faecalis PC1.1] gi|295114297|emb|CBL32934.1| DNA replication and repair protein RadC [Enterococcus sp. 7L76] gi|300849977|gb|EFK77727.1| DNA repair protein RadC [Enterococcus faecalis TUSoD Ef11] gi|315151663|gb|EFT95679.1| DNA repair protein RadC [Enterococcus faecalis TX0012] gi|323478891|gb|ADX78330.1| DNA repair protein RadC family protein [Enterococcus faecalis 62] gi|329573420|gb|EGG55030.1| DNA repair protein RadC [Enterococcus faecalis TX1467] Length = 232 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 133 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 193 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 228 >gi|260888418|ref|ZP_05899681.1| DNA repair protein RadC [Selenomonas sputigena ATCC 35185] gi|330838268|ref|YP_004412848.1| DNA repair protein RadC [Selenomonas sputigena ATCC 35185] gi|260861954|gb|EEX76454.1| DNA repair protein RadC [Selenomonas sputigena ATCC 35185] gi|329746032|gb|AEB99388.1| DNA repair protein RadC [Selenomonas sputigena ATCC 35185] Length = 229 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N ++A + S GT+ V+ RE+ Q +E SA ++ILVHNHPSG+P PS DI Sbjct: 132 LLLNAKNHILALKTISVGTLTSSVVHPREVFQAAIEQSAAAVILVHNHPSGDPAPSGEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ ++I V DH+I+G D F+S K +I Sbjct: 192 AVTRRMVEAGEIMDIPVLDHVIVGYDKFISLKEEGMI 228 >gi|255019864|ref|ZP_05291939.1| DNA repair protein RadC [Acidithiobacillus caldus ATCC 51756] gi|254970644|gb|EET28131.1| DNA repair protein RadC [Acidithiobacillus caldus ATCC 51756] Length = 224 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 39/95 (41%), Positives = 59/95 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E +GTID VY+RE+ +R LEL+A ++I+ HNHPSG PS AD Sbjct: 128 LFLDNRHRVLRFEELFQGTIDAASVYVREVAKRALELNAAALIVAHNHPSGVAEPSLADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +TQ + L L+I + DH ++G+ VS + + Sbjct: 188 QLTQRLEQALELLDIRLLDHFVVGETQAVSLREVG 222 >gi|254454766|ref|ZP_05068203.1| DNA repair protein RadC [Octadecabacter antarcticus 238] gi|198269172|gb|EDY93442.1| DNA repair protein RadC [Octadecabacter antarcticus 238] Length = 265 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+LIADE Q GT+DHVPVY RE+V+R LEL+A+S+ILVHNHPSG+P PS+ DI Sbjct: 169 LFLDRKNVLIADEAQGNGTVDHVPVYPREVVKRALELNASSLILVHNHPSGDPTPSNEDI 228 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I LNI +HDH+IIG+ +SFK +I Sbjct: 229 AMTMQIHDAAKALNISLHDHLIIGRSRELSFKSQGLI 265 >gi|315174741|gb|EFU18758.1| DNA repair protein RadC [Enterococcus faecalis TX1346] Length = 232 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 133 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 193 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 228 >gi|320195796|gb|EFW70421.1| DNA repair protein RadC [Escherichia coli WV_060327] Length = 150 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N L+ E+ RGT++ V V+ RE+++R L+ +A ++ILVHNHPSG P P DI Sbjct: 54 ILLDNQNQLLHREILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPRRCDI 113 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L L++ + DH I+ VS ++ Sbjct: 114 KLTKKLQELLEMLDVRLLDHFIVAGTETVSMAERGLM 150 >gi|253689260|ref|YP_003018450.1| DNA repair protein RadC [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755838|gb|ACT13914.1| DNA repair protein RadC [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 157 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI EV + G I+ V+ REI++ L +A ++IL HNHPSG PS AD Sbjct: 61 LYLDNQHRLIEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + +L+ L++ V DH+++G VSF + Sbjct: 121 NITDRLKDSLSQLDVKVLDHLVVGSTEVVSFAERGWL 157 >gi|92116052|ref|YP_575781.1| DNA repair protein RadC [Nitrobacter hamburgensis X14] gi|91798946|gb|ABE61321.1| DNA repair protein RadC [Nitrobacter hamburgensis X14] Length = 254 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 64/97 (65%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LI DE+Q GT+DH PVY RE+V+R LELSAT+II+VHNHPSG+P PS ADI Sbjct: 158 LFLDKRNQLIVDELQQVGTVDHTPVYPREVVKRALELSATAIIMVHNHPSGDPTPSQADI 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT++II PL I VHDHII+GK+ S KGLR+I Sbjct: 218 QMTKSIIDISKPLGISVHDHIIVGKNGHASLKGLRLI 254 >gi|251780848|ref|ZP_04823768.1| DNA repair protein RadC [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085163|gb|EES51053.1| DNA repair protein RadC [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 229 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ NI+I + +G+++ V+ REI + + S+ II+ HNHPSG+P PS DI Sbjct: 133 IFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSAKIIICHNHPSGDPTPSKEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T I + I + DHIIIGK+ F+S K I Sbjct: 193 NITLRIKECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229 >gi|121582744|ref|YP_973186.1| DNA repair protein RadC [Polaromonas naphthalenivorans CJ2] gi|120596006|gb|ABM39444.1| DNA repair protein RadC [Polaromonas naphthalenivorans CJ2] Length = 168 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI RGT+ VY RE+V+ L L+A ++I HNHPSG PS AD Sbjct: 72 LMLDAQNRLIEYVELFRGTVSQASVYPREVVKESLALNAAAVIFCHNHPSGVAEPSRADE 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + T L+ +++ V DH+I+ + +SF ++ Sbjct: 132 VLTQTLKTALSLVDVRVLDHLIVAGNEIMSFAERGLL 168 >gi|319943236|ref|ZP_08017519.1| DNA repair protein RadC [Lautropia mirabilis ATCC 51599] gi|319743778|gb|EFV96182.1| DNA repair protein RadC [Lautropia mirabilis ATCC 51599] Length = 278 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 63/97 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ + LI ++ RGT++ VY RE+++ L+L+A ++IL HNHPSG+P PSDAD+ Sbjct: 182 LFLNSQHRLITADMMFRGTVNQTAVYPREVLKHALKLNAAAVILSHNHPSGHPEPSDADL 241 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L ++I V DHII+ SF ++ Sbjct: 242 SLTRTLQAVLGQVDIRVLDHIIVAGSQQYSFAQHGLL 278 >gi|145630047|ref|ZP_01785829.1| DNA repair protein RadC [Haemophilus influenzae R3021] gi|144984328|gb|EDJ91751.1| DNA repair protein RadC [Haemophilus influenzae R3021] Length = 99 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 3 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 62 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DH+I+GK SF ++ Sbjct: 63 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 99 >gi|294495396|ref|YP_003541889.1| DNA replication and repair protein RadC [Methanohalophilus mahii DSM 5219] gi|292666395|gb|ADE36244.1| DNA replication and repair protein RadC [Methanohalophilus mahii DSM 5219] Length = 229 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N ++ +EV S G+++ V+ RE+ + L SA S+IL HNHPSG+P PS DI Sbjct: 132 LHLDTKNQVLREEVVSIGSLNANIVHPREVFKSALLESAASVILTHNHPSGDPTPSREDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ ++ L I V DH+IIG+ FVS K I Sbjct: 192 NITRKLVDGGKILGIDVLDHVIIGEGKFVSLKDEGYI 228 >gi|87120857|ref|ZP_01076749.1| DNA repair protein RadC [Marinomonas sp. MED121] gi|86163695|gb|EAQ64968.1| DNA repair protein RadC [Marinomonas sp. MED121] Length = 224 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + LI + GTID VY RE+V+ L +A + IL HNHPSG PS ADI Sbjct: 128 MFLDSQHRLIHFQEMFYGTIDAAAVYPREVVKMALSYNAAACILAHNHPSGVSEPSQADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +TQ + L+ ++I + DH +IG +S Sbjct: 188 YITQKLQQALSLVDINLLDHFVIGDGKPISLAERG 222 >gi|257420575|ref|ZP_05597565.1| DNA repair protein radC [Enterococcus faecalis X98] gi|257162399|gb|EEU92359.1| DNA repair protein radC [Enterococcus faecalis X98] Length = 232 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 133 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 193 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 228 >gi|256960307|ref|ZP_05564478.1| DNA repair protein RadC [Enterococcus faecalis Merz96] gi|257083375|ref|ZP_05577736.1| DNA repair protein RadC [Enterococcus faecalis Fly1] gi|256950803|gb|EEU67435.1| DNA repair protein RadC [Enterococcus faecalis Merz96] gi|256991405|gb|EEU78707.1| DNA repair protein RadC [Enterococcus faecalis Fly1] Length = 232 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 133 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 193 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 228 >gi|157370015|ref|YP_001478004.1| DNA repair protein RadC [Serratia proteamaculans 568] gi|157321779|gb|ABV40876.1| DNA repair protein RadC [Serratia proteamaculans 568] Length = 160 Score = 127 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+ E G+I+ V+ REIV+ L+ +A +++L H HPSG+ +PSDAD Sbjct: 64 LYLDNQHRLLTHETLFTGSINSTEVHPREIVKSALKHNAAAVLLAHCHPSGHADPSDADR 123 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ I L + + V DH I+G SF ++ Sbjct: 124 NITRRIQEALMLVEVRVLDHCIVGGMTVYSFAEHSLL 160 >gi|325571584|ref|ZP_08147084.1| DNA repair protein RadC [Enterococcus casseliflavus ATCC 12755] gi|325156060|gb|EGC68256.1| DNA repair protein RadC [Enterococcus casseliflavus ATCC 12755] Length = 230 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + G+++ + REI + SA +I+VHNHPSG+P S+AD+ Sbjct: 129 IYLNTKNEIIQKKTIFIGSLNQSIAHPREIFHWAVRYSAARVIVVHNHPSGSPQASEADL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ +I + + I + DH+IIG +A+VS + + Sbjct: 189 LFTRRLIKCGDLMGIELLDHLIIGDNAYVSLREEGL 224 >gi|116333860|ref|YP_795387.1| DNA repair protein [Lactobacillus brevis ATCC 367] gi|116099207|gb|ABJ64356.1| DNA repair protein [Lactobacillus brevis ATCC 367] Length = 220 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 51/95 (53%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + +I + +GT++ PV+ REI + + A ++I+ HNHPSG P PS +D Sbjct: 112 LDAQHRIIERQTVFQGTLNSCPVHPREIFRVAVMSGAATVIVAHNHPSGQPQPSTSDRAF 171 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 Q + + I + D ++G ++ SFK I+ Sbjct: 172 MQRLAACGQLMGIPLLDGFVVGLHSYFSFKEAGIL 206 >gi|16803589|ref|NP_465074.1| DNA repair protein RadC [Listeria monocytogenes EGD-e] gi|47096713|ref|ZP_00234298.1| DNA repair protein RadC [Listeria monocytogenes str. 1/2a F6854] gi|224499790|ref|ZP_03668139.1| DNA repair protein RadC [Listeria monocytogenes Finland 1988] gi|224501511|ref|ZP_03669818.1| DNA repair protein RadC [Listeria monocytogenes FSL R2-561] gi|254828216|ref|ZP_05232903.1| DNA repair protein RadC [Listeria monocytogenes FSL N3-165] gi|254831950|ref|ZP_05236605.1| DNA repair protein RadC [Listeria monocytogenes 10403S] gi|254898284|ref|ZP_05258208.1| DNA repair protein RadC [Listeria monocytogenes J0161] gi|254912223|ref|ZP_05262235.1| DNA repair protein RadC [Listeria monocytogenes J2818] gi|254936551|ref|ZP_05268248.1| DNA repair protein RadC [Listeria monocytogenes F6900] gi|255026815|ref|ZP_05298801.1| DNA repair protein RadC [Listeria monocytogenes FSL J2-003] gi|284801939|ref|YP_003413804.1| DNA repair protein RadC [Listeria monocytogenes 08-5578] gi|284995081|ref|YP_003416849.1| DNA repair protein RadC [Listeria monocytogenes 08-5923] gi|25009032|sp|Q8Y6Y2|Y1549_LISMO RecName: Full=UPF0758 protein lmo1549 gi|16410978|emb|CAC99627.1| lmo1549 [Listeria monocytogenes EGD-e] gi|47014897|gb|EAL05845.1| DNA repair protein RadC [Listeria monocytogenes str. 1/2a F6854] gi|258600605|gb|EEW13930.1| DNA repair protein RadC [Listeria monocytogenes FSL N3-165] gi|258609145|gb|EEW21753.1| DNA repair protein RadC [Listeria monocytogenes F6900] gi|284057501|gb|ADB68442.1| DNA repair protein RadC [Listeria monocytogenes 08-5578] gi|284060548|gb|ADB71487.1| DNA repair protein RadC [Listeria monocytogenes 08-5923] gi|293590197|gb|EFF98531.1| DNA repair protein RadC [Listeria monocytogenes J2818] Length = 224 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I + G ++ V+ RE+ + L SA SI+ HNHPSG+P PS D+ Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPTPSSEDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + N + I + DHIIIGK+ ++S K Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223 >gi|261856735|ref|YP_003264018.1| DNA repair protein RadC [Halothiobacillus neapolitanus c2] gi|261837204|gb|ACX96971.1| DNA repair protein RadC [Halothiobacillus neapolitanus c2] Length = 223 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ + ++A E GTI+ V+ RE+V+ L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDQRHRVLAFERLFYGTINQSAVHPREVVKAVLRHNAAAVILAHNHPSGVAEPSTADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + LN +++ + DH+I+G S L +I Sbjct: 188 EITLRLRDALNLIDVRLLDHMIVGD-RCTSMAELGMI 223 >gi|238787658|ref|ZP_04631456.1| DNA repair protein RadC [Yersinia frederiksenii ATCC 33641] gi|238724445|gb|EEQ16087.1| DNA repair protein RadC [Yersinia frederiksenii ATCC 33641] Length = 159 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+A E G+I+ V+ REIV+ L+ +A +++L H HPSG+ PS AD Sbjct: 63 LWLDNQHRLLAHETLFTGSINSTEVHPREIVKAALQHNAAAVLLAHCHPSGHAEPSVADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L + + + DH I+G SF ++ Sbjct: 123 QITGKIKDALALVEVRMLDHCIVGGMTVYSFAEHGLL 159 >gi|266623040|ref|ZP_06115975.1| DNA repair protein RadC [Clostridium hathewayi DSM 13479] gi|288865204|gb|EFC97502.1| DNA repair protein RadC [Clostridium hathewayi DSM 13479] Length = 231 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ +L+ D + S+GT++ V REI L+ A ++I+VHNHPSG+P PS DI Sbjct: 135 MLLNTKGVLLKDVLVSQGTVNASVVSPREIFIEALKYHAVNLIVVHNHPSGDPAPSREDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ + + I + DHIIIG +++ SFK II Sbjct: 195 TLTRRIMEAGDLIGIRMLDHIIIGDNSYTSFKERGII 231 >gi|217973526|ref|YP_002358277.1| DNA repair protein RadC [Shewanella baltica OS223] gi|217498661|gb|ACK46854.1| DNA repair protein RadC [Shewanella baltica OS223] Length = 160 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI+ E GTID VY RE+V+ L +A ++I HNHPSG P PS+AD Sbjct: 64 LLLDSQHRLISCEELFFGTIDAASVYPREVVKIVLHRNAAAVIFAHNHPSGMPEPSEADK 123 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + T L+ +++ V DH ++G VSF + Sbjct: 124 RITERLKTALSTIDVSVLDHFVVGHQDVVSFAERGWL 160 >gi|110633807|ref|YP_674015.1| DNA repair protein RadC [Mesorhizobium sp. BNC1] gi|110284791|gb|ABG62850.1| DNA repair protein RadC [Chelativorans sp. BNC1] Length = 251 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 63/96 (65%), Positives = 73/96 (76%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LI DE Q GT+DH PVY RE+V+R LELSA++IILVHNHPSG+P PS ADI Sbjct: 155 LFLDKKNALIKDECQQTGTVDHTPVYPREVVKRALELSASAIILVHNHPSGDPTPSRADI 214 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 MT+ I +T PL I VHDHIIIGK S KG+R+ Sbjct: 215 EMTKLIASTAEPLGITVHDHIIIGKKGHASMKGMRL 250 >gi|283852530|ref|ZP_06369798.1| DNA repair protein RadC [Desulfovibrio sp. FW1012B] gi|283572138|gb|EFC20130.1| DNA repair protein RadC [Desulfovibrio sp. FW1012B] Length = 228 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 40/94 (42%), Positives = 58/94 (61%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D N LI E S+GTID VY RE++ L +A+ +ILVHNHPSG+P PS DI+ T Sbjct: 135 DTKNRLIGWEQVSKGTIDQAAVYPREVLGVALRHNASGMILVHNHPSGDPRPSVQDIDFT 194 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + I T +++ V DH+++ D F SF+ ++ Sbjct: 195 RRIRTAAREIDLRVLDHLVVTDDRFFSFQSEGML 228 >gi|217964304|ref|YP_002349982.1| RadC [Listeria monocytogenes HCC23] gi|254789655|sp|B8DHJ9|Y1020_LISMH RecName: Full=UPF0758 protein LMHCC_1020 gi|217333574|gb|ACK39368.1| RadC [Listeria monocytogenes HCC23] gi|307571130|emb|CAR84309.1| DNA repair protein [Listeria monocytogenes L99] Length = 224 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I + G ++ V+ RE+ + L SA SI+ HNHPSG+P PS D+ Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPAPSSEDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + N + I + DHIIIGK+ ++S K Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223 >gi|39995494|ref|NP_951445.1| DNA repair protein RadC [Geobacter sulfurreducens PCA] gi|54036228|sp|Q74G62|Y386_GEOSL RecName: Full=UPF0758 protein GSU0386 gi|39982257|gb|AAR33718.1| DNA repair protein RadC [Geobacter sulfurreducens PCA] gi|298504494|gb|ADI83217.1| protein of unknown function DUF2466 [Geobacter sulfurreducens KN400] Length = 229 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N ++ + S G+++ V+ RE+ + SA ++ILVHNHP+G+P PS D+ Sbjct: 133 LLLDGKNRIMREIQVSEGSLNQSIVHPREVFNPAVRESAAAVILVHNHPTGDPAPSREDL 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + I V DHIIIG F SF ++ Sbjct: 193 EITRRLREAGDIMGIRVLDHIIIGDGRFTSFVSAGLL 229 >gi|303245835|ref|ZP_07332117.1| DNA repair protein RadC [Desulfovibrio fructosovorans JJ] gi|302492618|gb|EFL52486.1| DNA repair protein RadC [Desulfovibrio fructosovorans JJ] Length = 228 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 57/94 (60%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D N LI E S+GT+D VY RE++ L A+ +ILVHNHPSG+P PS D+ T Sbjct: 135 DTKNRLIGWEQVSKGTVDQAAVYPREVLGVALRHKASGMILVHNHPSGDPRPSTEDVEFT 194 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + I + +++ + DH+++ ++ F SF+ +I Sbjct: 195 RRIKSAAREIDLRLLDHLVVTENRFFSFQAEGMI 228 >gi|37678993|ref|NP_933602.1| DNA repair protein [Vibrio vulnificus YJ016] gi|37197735|dbj|BAC93573.1| DNA repair protein [Vibrio vulnificus YJ016] Length = 165 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N I + GTID VY RE+V+ LE++A ++IL HNHPSG+ PS AD Sbjct: 70 LLLDNQNRPIEFKELFHGTIDAASVYPREVVKVVLEVNAAAVILAHNHPSGDATPSQADR 129 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+ +++ V DH I+ VSF + Sbjct: 130 RITERLKDALSLVDVRVLDH-IVAGKDSVSFAERGWL 165 >gi|150396672|ref|YP_001327139.1| DNA repair protein RadC [Sinorhizobium medicae WSM419] gi|226736631|sp|A6U9H4|Y1459_SINMW RecName: Full=UPF0758 protein Smed_1459 gi|150028187|gb|ABR60304.1| DNA repair protein RadC [Sinorhizobium medicae WSM419] Length = 260 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 65/96 (67%), Positives = 76/96 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ +GTIDH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI Sbjct: 164 LFLDKRNTLIADEVQQQGTIDHTPVYPREVVKRALELSATALILVHNHPSGDPTPSCADI 223 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 MT+ I PL I +HDH+IIGKD VS KGL++ Sbjct: 224 EMTKLIAEAAKPLGIALHDHVIIGKDGHVSLKGLQL 259 >gi|310817115|ref|YP_003965079.1| DNA repair protein RadC [Ketogulonicigenium vulgare Y25] gi|308755850|gb|ADO43779.1| DNA repair protein RadC [Ketogulonicigenium vulgare Y25] Length = 252 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ NILIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS DI Sbjct: 156 LFLDRKNILIADEAQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSPQDI 215 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L L + +HDH++IG+ +SF+ +I Sbjct: 216 AITKQIDEGLRVLGLTLHDHLVIGRAREISFRAEGLI 252 >gi|291166595|gb|EFE28641.1| DNA repair protein RadC [Filifactor alocis ATCC 35896] Length = 227 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +I D S G+++ V+ RE+ + L S+ I L+HNHPSG+ PS DI Sbjct: 131 LFLDTKNKIICDRDISVGSLNASIVHPREVFKEALLYSSNKIFLIHNHPSGDTEPSREDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L + V DHIIIG + S + + Sbjct: 191 LITERLKKAGELLGVEVLDHIIIGNGKYSSLRECGYL 227 >gi|188589437|ref|YP_001919945.1| DNA repair protein RadC [Clostridium botulinum E3 str. Alaska E43] gi|238689648|sp|B2V090|Y547_CLOBA RecName: Full=UPF0758 protein CLH_0547 gi|188499718|gb|ACD52854.1| DNA repair protein RadC [Clostridium botulinum E3 str. Alaska E43] Length = 229 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ NI+I + +G+++ V+ REI + + S+T II+ HNHPSG+P PS DI Sbjct: 133 IFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSTKIIICHNHPSGDPTPSKEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T I + I + DHIIIGK+ F+S K I Sbjct: 193 NITLRIKECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229 >gi|296134038|ref|YP_003641285.1| DNA repair protein RadC [Thermincola sp. JR] gi|296032616|gb|ADG83384.1| DNA repair protein RadC [Thermincola potens JR] Length = 231 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N ++ E S G ++ V+ REI + ++ SA ++I+ HNHPSG+P+PS DI Sbjct: 135 IMLNTKNQVLNIETVSIGHLNASLVHPREIFKSAIKKSAAALIVAHNHPSGDPHPSKEDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DH+I+G + F S K +I Sbjct: 195 LITKRLVEVGEIIGIEVLDHVILGDNNFTSLKQEGLI 231 >gi|121606228|ref|YP_983557.1| DNA repair protein RadC [Polaromonas naphthalenivorans CJ2] gi|171769297|sp|A1VSK8|Y3339_POLNA RecName: Full=UPF0758 protein Pnap_3339 gi|120595197|gb|ABM38636.1| DNA replication and repair protein RadC [Polaromonas naphthalenivorans CJ2] Length = 224 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E RGT+ VY RE+V R L L+A S++L HNHPSG PS AD Sbjct: 128 LFLDSQHRLIALEELFRGTLTQTSVYPREVVIRALALNAASVVLAHNHPSGAAQPSRADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + T L +++ V DH ++ VS + ++ Sbjct: 188 MLTQTLKTALALVDVRVLDHFVVTASLAVSMAEMGLV 224 >gi|315282469|ref|ZP_07870876.1| putative DNA repair protein [Listeria marthii FSL S4-120] gi|313613887|gb|EFR87624.1| putative DNA repair protein [Listeria marthii FSL S4-120] Length = 224 Score = 127 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I + G ++ V+ RE+ + L SA SI+ HNHPSG+P PS D+ Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPAPSSEDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + N + I + DHIIIGK+ ++S K Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223 >gi|85374339|ref|YP_458401.1| hypothetical protein ELI_07560 [Erythrobacter litoralis HTCC2594] gi|84787422|gb|ABC63604.1| hypothetical protein ELI_07560 [Erythrobacter litoralis HTCC2594] Length = 236 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 63/97 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LI D G+ID ++ RE+++R L++ AT++ILVHNHPSGNP PS AD+ Sbjct: 140 LYLNAQNRLIQDHHVGDGSIDEAAIHPREVIKRGLDIGATALILVHNHPSGNPEPSRADV 199 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L I VHDH+I+G++ VS + +I Sbjct: 200 QITTRIAEAGRLLGITVHDHVIVGREGHVSLRAKGLI 236 >gi|167622369|ref|YP_001672663.1| DNA repair protein RadC [Shewanella halifaxensis HAW-EB4] gi|189029403|sp|B0TQL1|Y429_SHEHH RecName: Full=UPF0758 protein Shal_0429 gi|167352391|gb|ABZ75004.1| DNA repair protein RadC [Shewanella halifaxensis HAW-EB4] Length = 225 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTI+ VY RE+V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTINSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSTADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKQALQTIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|221065434|ref|ZP_03541539.1| DNA repair protein RadC [Comamonas testosteroni KF-1] gi|220710457|gb|EED65825.1| DNA repair protein RadC [Comamonas testosteroni KF-1] Length = 230 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N L+A E RGT+ VY RE+V R L A ++IL HNHPSG+ PS AD Sbjct: 134 LFLDSQNRLLALEEMFRGTLTQTSVYPREVVLRALHHHAGAVILAHNHPSGSVQPSSADC 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DHII+G A S ++ Sbjct: 194 ALTATLKAALALIDVRVLDHIIVGPGAACSMAEEALL 230 >gi|107104421|ref|ZP_01368339.1| hypothetical protein PaerPA_01005498 [Pseudomonas aeruginosa PACS2] gi|116053466|ref|YP_793793.1| DNA repair protein RadC [Pseudomonas aeruginosa UCBPP-PA14] gi|218894422|ref|YP_002443292.1| DNA repair protein RadC [Pseudomonas aeruginosa LESB58] gi|254243795|ref|ZP_04937117.1| DNA repair protein RadC [Pseudomonas aeruginosa 2192] gi|296392178|ref|ZP_06881653.1| DNA repair protein RadC [Pseudomonas aeruginosa PAb1] gi|313106745|ref|ZP_07792962.1| DNA repair protein RadC [Pseudomonas aeruginosa 39016] gi|122256513|sp|Q02E43|Y7023_PSEAB RecName: Full=UPF0758 protein PA14_70230 gi|226736626|sp|B7V5L0|Y5714_PSEA8 RecName: Full=UPF0758 protein PLES_57141 gi|115588687|gb|ABJ14702.1| DNA repair protein RadC [Pseudomonas aeruginosa UCBPP-PA14] gi|126197173|gb|EAZ61236.1| DNA repair protein RadC [Pseudomonas aeruginosa 2192] gi|218774651|emb|CAW30468.1| DNA repair protein RadC [Pseudomonas aeruginosa LESB58] gi|310879464|gb|EFQ38058.1| DNA repair protein RadC [Pseudomonas aeruginosa 39016] Length = 224 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A EV +G+ID VY R++V+R L +A ++IL HNHPSG+ PS AD Sbjct: 128 LFLDTRHRVLAFEVLFQGSIDGASVYPRQVVKRTLAHNAAALILTHNHPSGDARPSLADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DH IIG +S + Sbjct: 188 QLTARLKEALALIDVRVLDHFIIGDGEPLSLAEYGWL 224 >gi|261820684|ref|YP_003258790.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163] gi|261604697|gb|ACX87183.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163] Length = 157 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ + LI E+ + G I+ V+ REI++ L +A ++IL HNHPSG PS AD Sbjct: 61 LYLNNQHRLIEKEIIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGCAEPSQADR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T + +L+ L++ V DH+++G VSF + Sbjct: 121 HITDRLKESLSQLDVRVLDHLVVGGAEVVSFAERGWL 157 >gi|290893950|ref|ZP_06556926.1| DNA repair protein RadC [Listeria monocytogenes FSL J2-071] gi|290556488|gb|EFD90026.1| DNA repair protein RadC [Listeria monocytogenes FSL J2-071] gi|313608630|gb|EFR84484.1| putative DNA repair protein [Listeria monocytogenes FSL F2-208] Length = 224 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I + G ++ V+ RE+ + L SA SI+ HNHPSG+P PS D+ Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPAPSSEDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + N + I + DHIIIGK+ ++S K Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223 >gi|251788567|ref|YP_003003288.1| DNA repair protein RadC [Dickeya zeae Ech1591] gi|271498985|ref|YP_003332010.1| DNA repair protein RadC [Dickeya dadantii Ech586] gi|247537188|gb|ACT05809.1| DNA repair protein RadC [Dickeya zeae Ech1591] gi|270342540|gb|ACZ75305.1| DNA repair protein RadC [Dickeya dadantii Ech586] Length = 157 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E+ + G+I+HV + IREIV+ L +A ++IL HNHPSG+ PS D Sbjct: 61 LFLDNQHRLIDREIMALGSINHVDIPIREIVKAALRHNAAAVILAHNHPSGHAEPSTPDR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L ++I DH++IG + VSF + Sbjct: 121 ALTERLKSALELVDIRTLDHLVIGGNQVVSFAERGWL 157 >gi|320539538|ref|ZP_08039205.1| putative phage DNA repair protein [Serratia symbiotica str. Tucson] gi|320030391|gb|EFW12403.1| putative phage DNA repair protein [Serratia symbiotica str. Tucson] Length = 159 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+A E G+I+ V+ REIV+ L+ +A +++L H HPSG+ PS AD Sbjct: 63 LWLDNQHRLLAHETLFTGSINSTEVHPREIVKAALKHNAAAVLLAHCHPSGHAEPSVADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L + + + DH I+G SF ++ Sbjct: 123 QITGKIKDALALVEVRMLDHCIVGGMTVYSFAEHGLL 159 >gi|88707202|ref|ZP_01104892.1| DNA repair protein RadC [Congregibacter litoralis KT71] gi|88698545|gb|EAQ95674.1| DNA repair protein RadC [Congregibacter litoralis KT71] Length = 170 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ +GTID VY R +VQ L L+A +++L HNHPSG PS AD Sbjct: 74 LFLDSQHRVLQYAELFQGTIDGAAVYPRVVVQEALGLNAAAVVLFHNHPSGVAEPSTADR 133 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ + L +++ V DH+++ SF ++ Sbjct: 134 NITKRLQDALALIDVRVLDHLVVSAGEATSFAERGLL 170 >gi|46907778|ref|YP_014167.1| DNA repair protein RadC [Listeria monocytogenes str. 4b F2365] gi|47093084|ref|ZP_00230861.1| DNA repair protein RadC [Listeria monocytogenes str. 4b H7858] gi|226224150|ref|YP_002758257.1| DNA repair protein RadC [Listeria monocytogenes Clip81459] gi|254824392|ref|ZP_05229393.1| DNA repair protein RadC [Listeria monocytogenes FSL J1-194] gi|254852174|ref|ZP_05241522.1| DNA repair protein RadC [Listeria monocytogenes FSL R2-503] gi|254992662|ref|ZP_05274852.1| DNA repair protein RadC [Listeria monocytogenes FSL J2-064] gi|255522562|ref|ZP_05389799.1| DNA repair protein RadC [Listeria monocytogenes FSL J1-175] gi|300764784|ref|ZP_07074774.1| DNA repair protein RadC [Listeria monocytogenes FSL N1-017] gi|54036226|sp|Q71ZC0|Y1569_LISMF RecName: Full=UPF0758 protein LMOf2365_1569 gi|259551878|sp|C1KVJ6|Y1560_LISMC RecName: Full=UPF0758 protein Lm4b_01560 gi|46881047|gb|AAT04344.1| DNA repair protein RadC [Listeria monocytogenes serotype 4b str. F2365] gi|47018524|gb|EAL09280.1| DNA repair protein RadC [Listeria monocytogenes str. 4b H7858] gi|225876612|emb|CAS05321.1| Putative DNA repair protein RadC [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605477|gb|EEW18085.1| DNA repair protein RadC [Listeria monocytogenes FSL R2-503] gi|293593627|gb|EFG01388.1| DNA repair protein RadC [Listeria monocytogenes FSL J1-194] gi|300514460|gb|EFK41517.1| DNA repair protein RadC [Listeria monocytogenes FSL N1-017] gi|328465585|gb|EGF36814.1| hypothetical protein LM1816_06675 [Listeria monocytogenes 1816] gi|328474908|gb|EGF45708.1| hypothetical protein LM220_12012 [Listeria monocytogenes 220] Length = 224 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I + G ++ V+ RE+ + L SA SI+ HNHPSG+P PS D+ Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPTPSSEDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + N + I + DHIIIGK+ ++S K Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223 >gi|51598155|ref|YP_072346.1| hypothetical protein YPTB3868 [Yersinia pseudotuberculosis IP 32953] gi|186897377|ref|YP_001874489.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+] gi|51591437|emb|CAH23106.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] gi|186700403|gb|ACC91032.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+] Length = 159 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+A E G+I+ V+ REIV+ L+ +A +++L H HPSG+ PS AD Sbjct: 63 LWLDNQHRLLAHETLFTGSINSTEVHPREIVKAALQHNAAAVLLAHCHPSGHAEPSVADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L + + + DH I+G SF ++ Sbjct: 123 QITGKIKDALALVEVRMLDHCIVGGMTVYSFAEHGLL 159 >gi|288957329|ref|YP_003447670.1| DNA repair protein [Azospirillum sp. B510] gi|288909637|dbj|BAI71126.1| DNA repair protein [Azospirillum sp. B510] Length = 249 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 59/98 (60%), Positives = 75/98 (76%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADEVQ RGTIDH PVY RE+V+R LELSA ++ILVHNHPSG+P PS ADI Sbjct: 152 LFLDRRNTLIADEVQQRGTIDHTPVYPREVVKRALELSAAAVILVHNHPSGDPTPSRADI 211 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRII 97 MT+ I+ N + +++HDH++IGK SFK R++ Sbjct: 212 EMTKEIVRAANAVGLVIHDHLVIGKGGRHTSFKAQRLL 249 >gi|56694982|ref|YP_165328.1| DNA repair protein RadC [Ruegeria pomeroyi DSS-3] gi|73913740|sp|Q5LWK3|Y054_SILPO RecName: Full=UPF0758 protein SPO0054 gi|56676719|gb|AAV93385.1| DNA repair protein RadC [Ruegeria pomeroyi DSS-3] Length = 224 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 52/96 (54%), Positives = 73/96 (76%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD+ N+LIADE Q+RGT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS +DI+ Sbjct: 129 YLDRKNVLIADEEQARGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQSDID 188 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I + L + +HDH+IIGK +SF+ + Sbjct: 189 MTARIRSACEALGLTLHDHLIIGKSVELSFRAEGYL 224 >gi|118580692|ref|YP_901942.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379] gi|118503402|gb|ABK99884.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379] Length = 166 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N + + S G+++ V+ RE+ + L SA +IIL+HNHPSG+P PS DI Sbjct: 71 IHLDGKNRICCVDEVSVGSLNQSVVHPREVFKTALLSSAAAIILMHNHPSGDPAPSREDI 130 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + V DHIIIG + F SF ++ Sbjct: 131 EITKRLKEAGELIGVKVLDHIIIGDN-FHSFASQGLL 166 >gi|254237987|ref|ZP_04931310.1| DNA repair protein RadC [Pseudomonas aeruginosa C3719] gi|126169918|gb|EAZ55429.1| DNA repair protein RadC [Pseudomonas aeruginosa C3719] Length = 224 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A EV +G+ID VY R++V+R L +A ++IL HNHPSG+ PS AD Sbjct: 128 LFLDTRHRVLAFEVLFQGSIDGASVYPRQVVKRTLAHNAAALILTHNHPSGDARPSLADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DH IIG +S + Sbjct: 188 QLTARLKEALALIDVRVLDHFIIGDGEPLSLAEYGWL 224 >gi|226324950|ref|ZP_03800468.1| hypothetical protein COPCOM_02742 [Coprococcus comes ATCC 27758] gi|225206298|gb|EEG88652.1| hypothetical protein COPCOM_02742 [Coprococcus comes ATCC 27758] Length = 236 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI + SRGT++ + RE+ L+ +A IIL+HNHPSG+P PS DI Sbjct: 137 LMLNTRSRLIGESEISRGTVNMSVISPRELFIEALQKNAVYIILLHNHPSGDPMPSREDI 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I + L I + DHIIIG + +VS +++ Sbjct: 197 LVTQRIREGGSLLGIELLDHIIIGDNCYVSLAEQKLL 233 >gi|85713454|ref|ZP_01044444.1| DNA repair protein RadC [Nitrobacter sp. Nb-311A] gi|85699358|gb|EAQ37225.1| DNA repair protein RadC [Nitrobacter sp. Nb-311A] Length = 236 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 66/97 (68%), Positives = 78/97 (80%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+V+R LELSAT+II+VHNHPSG+P PS ADI Sbjct: 140 LFLDKRNQLIADEVQQVGTVDHTPVYPREVVKRALELSATAIIMVHNHPSGDPTPSQADI 199 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT++II +PL I VHDHII+GK+ S KGLR+I Sbjct: 200 QMTRSIIDISSPLGISVHDHIIVGKNGHASLKGLRLI 236 >gi|312113065|ref|YP_004010661.1| DNA repair protein RadC [Rhodomicrobium vannielii ATCC 17100] gi|311218194|gb|ADP69562.1| DNA repair protein RadC [Rhodomicrobium vannielii ATCC 17100] Length = 253 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 58/95 (61%), Positives = 72/95 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADEVQSRGTIDH VY RE+V+R LELSA+++IL HNHPSG+P PS ADI Sbjct: 157 LFLDRRNKLIADEVQSRGTIDHTSVYTREVVKRALELSASAVILAHNHPSGDPTPSRADI 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 MT+ I + L + VHDHII+G+D +S K + Sbjct: 217 EMTKEIAEVGSKLGVTVHDHIILGRDGHLSLKSVG 251 >gi|260459829|ref|ZP_05808083.1| DNA repair protein RadC [Mesorhizobium opportunistum WSM2075] gi|259034631|gb|EEW35888.1| DNA repair protein RadC [Mesorhizobium opportunistum WSM2075] Length = 253 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 66/97 (68%), Positives = 74/97 (76%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LI DEVQ GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 157 LFLDKKNTLIVDEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ II T PL I VHDHIIIG+ S KGL +I Sbjct: 217 EMTKQIIDTAKPLGIAVHDHIIIGRKGHASMKGLLLI 253 >gi|290474866|ref|YP_003467746.1| putative CP4-57 prophage; DNA repair protein [Xenorhabdus bovienii SS-2004] gi|289174179|emb|CBJ80966.1| putative CP4-57 prophage; DNA repair protein [Xenorhabdus bovienii SS-2004] Length = 156 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+ E GT+ H V+ RE+V+ L +A ++IL HNHPSG PS AD Sbjct: 61 LYLDNQHRLLERETLFTGTLSHTEVHPREVVKAALRHNAAAVILAHNHPSGEMEPSQADR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ +++ L + + V DH+++G D +SF + Sbjct: 121 HITKRVVSALALVEVRVLDHLVVGDD-VMSFAERGWL 156 >gi|77918415|ref|YP_356230.1| DNA repair protein, RadC-like [Pelobacter carbinolicus DSM 2380] gi|77544498|gb|ABA88060.1| DNA repair protein, RadC-like protein [Pelobacter carbinolicus DSM 2380] Length = 166 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N L+ + S G++ V+ RE+ + L SA ++LVHNHPSG PS D Sbjct: 71 LHLDNKNRLLCLDRVSVGSLSASIVHPREVFKSALLSSAAGLVLVHNHPSGQTEPSHEDE 130 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L I V DHII+G F SF ++ Sbjct: 131 EVTTRLVKAGEMLGIHVLDHIILGDG-FFSFAEQGLL 166 >gi|238761834|ref|ZP_04622808.1| DNA repair protein RadC [Yersinia kristensenii ATCC 33638] gi|238699948|gb|EEP92691.1| DNA repair protein RadC [Yersinia kristensenii ATCC 33638] Length = 161 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+A E GTI+ V+ RE+V+ ++ +A S +L HNHPS PS AD Sbjct: 63 LWLDNQNRLLAQETLFTGTINSTTVHPRELVKSAMKHNAASAVLAHNHPSQLAEPSQADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L +++ V DH+++G VSF + Sbjct: 123 QITDRLVNALGLVDVRVLDHLVVGGLDIVSFAERGWL 159 >gi|75674533|ref|YP_316954.1| DNA repair protein RadC [Nitrobacter winogradskyi Nb-255] gi|74419403|gb|ABA03602.1| DNA repair protein RadC [Nitrobacter winogradskyi Nb-255] Length = 236 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 65/97 (67%), Positives = 78/97 (80%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GTIDH PVY RE+V+R LELSAT+II+VHNHPSG+P PS ADI Sbjct: 140 LFLDKRNQLIADEVQQVGTIDHTPVYPREVVKRALELSATAIIMVHNHPSGDPTPSQADI 199 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT++I+ +PL I VHDHII+GK+ S KGLR++ Sbjct: 200 QMTKSIVDISSPLGISVHDHIIVGKNGHSSLKGLRLM 236 >gi|113971925|ref|YP_735718.1| DNA repair protein RadC [Shewanella sp. MR-4] gi|123324586|sp|Q0HE56|Y3597_SHESM RecName: Full=UPF0758 protein Shewmr4_3597 gi|113886609|gb|ABI40661.1| DNA repair protein RadC [Shewanella sp. MR-4] Length = 225 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY RE+V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|229087017|ref|ZP_04219171.1| DNA repair protein radC [Bacillus cereus Rock3-44] gi|228696280|gb|EEL49111.1| DNA repair protein radC [Bacillus cereus Rock3-44] Length = 225 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVMHRQTVFIGSLNASIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I + DHIIIG FVS K I Sbjct: 189 EVTKRLVNCGRIIGIEILDHIIIGDHKFVSLKEKGHI 225 >gi|304414796|ref|ZP_07395755.1| DNA repair protein RadC [Candidatus Regiella insecticola LSR1] gi|304283148|gb|EFL91561.1| DNA repair protein RadC [Candidatus Regiella insecticola LSR1] Length = 181 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD +I+ + G+I V ++ REIV+ L+++A ++IL HNHPSG PS+AD Sbjct: 85 LFLDNQYRVISHDELFIGSISSVEIHPREIVREALKVNAAALILSHNHPSGQAEPSEADN 144 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T II L+I + DH++IG +VSF I Sbjct: 145 LITVRIIKACALLDIRLLDHLVIGHGEYVSFAERGWI 181 >gi|251788764|ref|YP_003003485.1| DNA repair protein RadC [Dickeya zeae Ech1591] gi|247537385|gb|ACT06006.1| DNA repair protein RadC [Dickeya zeae Ech1591] Length = 169 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL + LI GT+ VY REIV+ L +A ++IL HNHPSGN PS AD+ Sbjct: 73 LFLTTRHRLIEYAELFYGTLATTAVYPREIVRNALSCNAAAVILAHNHPSGNTEPSQADL 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DHII+G + +SF ++ Sbjct: 133 MLTRRVSAALALVDVRVLDHIIVGGNDTLSFAERALL 169 >gi|284008822|emb|CBA75590.1| DNA repair protein [Arsenophonus nasoniae] Length = 222 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I E +GTI+ V V+ REI+++ ++++A SIIL HNHPSGNP PS AD Sbjct: 126 LFLNNQNQIICYEEMFKGTINRVEVHPREILRQAVKVNAVSIILAHNHPSGNPEPSLADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I ++I + DH +I +SF L ++ Sbjct: 186 VVTERIANACRLIDIKLLDHFVITHKKCLSFVELDLL 222 >gi|24375732|ref|NP_719775.1| DNA repair protein RadC [Shewanella oneidensis MR-1] gi|38372485|sp|Q8E9M2|Y4248_SHEON RecName: Full=UPF0758 protein SO_4248 gi|24350669|gb|AAN57219.1|AE015857_12 DNA repair protein RadC [Shewanella oneidensis MR-1] Length = 225 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY RE+V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|114564978|ref|YP_752492.1| DNA repair protein RadC [Shewanella frigidimarina NCIMB 400] gi|122298392|sp|Q07WG1|Y3828_SHEFN RecName: Full=UPF0758 protein Sfri_3828 gi|114336271|gb|ABI73653.1| DNA repair protein RadC [Shewanella frigidimarina NCIMB 400] Length = 225 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY RE+V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDTQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L +++ + DH+++G VSF I Sbjct: 188 RITERIKNALATIDVSLLDHMVVGDQEIVSFAERGWI 224 >gi|49475599|ref|YP_033640.1| DNA repair protein radC [Bartonella henselae str. Houston-1] gi|49238406|emb|CAF27633.1| DNA repair protein radC [Bartonella henselae str. Houston-1] Length = 264 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 56/97 (57%), Positives = 70/97 (72%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N L+ADEVQ GTIDH PVY RE++ R L+LSA+ +ILVHNHPSG+ PS AD+ Sbjct: 168 LFLDKKNGLLADEVQQTGTIDHTPVYPREVISRALQLSASGLILVHNHPSGDATPSKADV 227 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + N L I VHDH+II ++ + SFK L+ I Sbjct: 228 TMTYRLKDAANALGITVHDHLIIARNNYTSFKELKFI 264 >gi|238793077|ref|ZP_04636706.1| DNA repair protein RadC [Yersinia intermedia ATCC 29909] gi|238727677|gb|EEQ19202.1| DNA repair protein RadC [Yersinia intermedia ATCC 29909] Length = 161 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+A E GTI+ V+ RE+V+ ++ +A S +L HNHPS PS AD Sbjct: 63 LWLDNQNRLLAQETLFTGTINSTTVHPRELVKSAMKHNAASAVLAHNHPSQLAEPSQADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L +++ V DH+++G VSF + Sbjct: 123 QITDRLVNALGLVDVRVLDHLVVGGLDIVSFAERGWL 159 >gi|206578396|ref|YP_002240722.1| DNA repair protein, RadC family [Klebsiella pneumoniae 342] gi|206567454|gb|ACI09230.1| DNA repair protein, RadC family [Klebsiella pneumoniae 342] Length = 161 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ + L+ E G+I+HV V+ RE+V+ L +A +++L HNHPSG+P PS D Sbjct: 65 LYLNNQHCLLESETLFAGSINHVQVHPREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDR 124 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + L +++ DH++IG + VSF I Sbjct: 125 NITGRLKEALALVDVNTLDHLVIGSEGIVSFAERGWI 161 >gi|241767328|ref|ZP_04765050.1| DNA repair protein RadC [Acidovorax delafieldii 2AN] gi|241361963|gb|EER58149.1| DNA repair protein RadC [Acidovorax delafieldii 2AN] Length = 237 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N L+A E RGT+ VY RE+V R L A +++L HNHPSG+ PS AD Sbjct: 141 LFLDSQNRLLAMEELFRGTLTQTSVYPREVVLRALHHQAAAVVLAHNHPSGSVAPSRADE 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + TTL +++ V DH+I+ +S ++ Sbjct: 201 ALTHTLKTTLALVDVRVLDHVIVAPGQALSMAEKGLV 237 >gi|192288820|ref|YP_001989425.1| DNA repair protein RadC [Rhodopseudomonas palustris TIE-1] gi|192282569|gb|ACE98949.1| DNA repair protein RadC [Rhodopseudomonas palustris TIE-1] Length = 239 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 64/97 (65%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADE+Q GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI Sbjct: 143 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRGLELSATAVIMVHNHPSGDPTPSQADI 202 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT++I+ PL I VHDHII+GK+ S KGLR+I Sbjct: 203 QMTKSIVAIAEPLGIAVHDHIIVGKNGHASLKGLRLI 239 >gi|304391571|ref|ZP_07373513.1| putative DNA repair protein RadC-like protein [Ahrensia sp. R2A130] gi|303295800|gb|EFL90158.1| putative DNA repair protein RadC-like protein [Ahrensia sp. R2A130] Length = 259 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 54/96 (56%), Positives = 70/96 (72%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+K N L+ DE GT+DH P Y REIV+R LE+ AT++ILVHNHPSG+P PS ADI Sbjct: 163 LYLNKQNGLMDDEEMQEGTVDHTPAYPREIVRRALEVGATAVILVHNHPSGDPTPSRADI 222 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ I T+ +NI VHDHIIIG+D S K L++ Sbjct: 223 ELTRQINTSCQTMNIAVHDHIIIGRDTHTSMKALQL 258 >gi|295110011|emb|CBL23964.1| DNA replication and repair protein RadC [Ruminococcus obeum A2-162] Length = 236 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N L+ D + S+GT++ + REI L A ++IL+HNHP GNP+PS D Sbjct: 135 MMLDNQNHLLGDTLLSKGTVNATLITPREIFLEALRYHAVNLILIHNHPGGNPSPSVCDK 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L I + DHIIIG +VSF+ ++ Sbjct: 195 EITERISQAGEMLGICLLDHIIIGDQRYVSFREQGLL 231 >gi|206561051|ref|YP_002231816.1| DNA repair protein RadC [Burkholderia cenocepacia J2315] gi|198037093|emb|CAR53014.1| putative DNA repair protein [Burkholderia cenocepacia J2315] Length = 209 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N LI E +RG++ + VY REIV+R ++ +A ++I+ HNHPSG PS D Sbjct: 113 VYLDARNRLIDMEEIARGSLTRMAVYPREIVRRAMKHNAAALIVAHNHPSGAVQPSAEDR 172 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G SF + Sbjct: 173 RLTRVLKDALELVDVRLLDHVVVGVSDTFSFARAGWL 209 >gi|150390056|ref|YP_001320105.1| DNA repair protein RadC [Alkaliphilus metalliredigens QYMF] gi|172052477|sp|A6TQH8|Y2289_ALKMQ RecName: Full=UPF0758 protein Amet_2289 gi|149949918|gb|ABR48446.1| DNA repair protein RadC [Alkaliphilus metalliredigens QYMF] Length = 232 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 60/96 (62%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L+ + +IA E S G+++ V+ RE+ ++ S+++IILVHNHPSG+P+PS DI Sbjct: 137 LLNTKHEVIAIENISIGSLNASIVHPREVFVVAIKRSSSAIILVHNHPSGDPSPSGEDIR 196 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I V DHIIIG + + S K ++ Sbjct: 197 ITKRLVEAGKLLGIEVLDHIIIGDNVYYSLKEKSMM 232 >gi|292486886|ref|YP_003529756.1| DNA repair protein radC [Erwinia amylovora CFBP1430] gi|292900719|ref|YP_003540088.1| RadC-like protein [Erwinia amylovora ATCC 49946] gi|291200567|emb|CBJ47696.1| putative RadC-like protein [Erwinia amylovora ATCC 49946] gi|291552303|emb|CBA19340.1| DNA repair protein radC homolog [Erwinia amylovora CFBP1430] Length = 156 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + L+ E GT+ V+ RE+V+ L+ +A ++IL HNHPSG S D Sbjct: 61 MYLDNQHCLLGCETLFTGTLSQTEVHPREVVKLALKHNAAAVILAHNHPSGTTEISQQDK 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ I+ L + + V DH+++G + VSF ++ Sbjct: 121 HITQRIVKALALVEVRVLDHLVVG-NEVVSFAEQGLL 156 >gi|49081838|gb|AAT50319.1| PA5319 [synthetic construct] Length = 225 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +++ EV +G+ID VY R++V+R L +A ++IL HNHPSG+ PS AD Sbjct: 128 LFLDTRHRVLSFEVLFQGSIDGASVYPRQVVKRTLAHNAAALILTHNHPSGDARPSLADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DH IIG +S + Sbjct: 188 QLTARLKEALALIDVRVLDHFIIGDGEPLSLAEYGWL 224 >gi|315582770|gb|EFU94961.1| DNA repair protein RadC [Enterococcus faecalis TX0309A] Length = 240 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 201 QFTKRMEECGEMMGIQLLDHIILGDSGYISLREENF 236 >gi|316931615|ref|YP_004106597.1| DNA repair protein RadC [Rhodopseudomonas palustris DX-1] gi|315599329|gb|ADU41864.1| DNA repair protein RadC [Rhodopseudomonas palustris DX-1] Length = 237 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 63/97 (64%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADE+Q GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI Sbjct: 141 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRGLELSATAVIMVHNHPSGDPTPSQADI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT++I+ PL I VHDHII+GK+ S KGL++I Sbjct: 201 QMTKSIVAIAEPLGIAVHDHIIVGKNGHASLKGLKLI 237 >gi|255527526|ref|ZP_05394394.1| DNA repair protein RadC [Clostridium carboxidivorans P7] gi|255508796|gb|EET85168.1| DNA repair protein RadC [Clostridium carboxidivorans P7] Length = 228 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N+++ + S G+++ V+ RE+ + ++ II+ HNHPSG+P PS+ DI Sbjct: 132 IMLNTKNVVLFIKDVSVGSLNSSIVHPREVFCDAIRKNSAFIIVCHNHPSGDPQPSNEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + L I + DH+IIG ++S K I+ Sbjct: 192 NVTNRLKECGKLLGIELLDHLIIGNGRYISLKEKGIL 228 >gi|157963648|ref|YP_001503682.1| DNA repair protein RadC [Shewanella pealeana ATCC 700345] gi|189029404|sp|A8H9B0|Y3837_SHEPA RecName: Full=UPF0758 protein Spea_3837 gi|157848648|gb|ABV89147.1| DNA repair protein RadC [Shewanella pealeana ATCC 700345] Length = 225 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTI+ VY RE+V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTINSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSTADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKQALQTIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|281178374|dbj|BAI54704.1| putative phage DNA repair protein [Escherichia coli SE15] Length = 156 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N L+ E+ RGT++ V V+ RE+++R L+ +A ++ILVHNHPSG P PS DI Sbjct: 60 ILLDNQNQLLHREILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDI 119 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L L++ + DH I+ VS ++ Sbjct: 120 QLTKKLQELLEILDVRLLDHFIVAGTETVSMAERGLV 156 >gi|15615594|ref|NP_243898.1| DNA repair protein RadC [Bacillus halodurans C-125] gi|13431811|sp|Q9K8H4|Y3032_BACHD RecName: Full=UPF0758 protein BH3032 gi|10175654|dbj|BAB06751.1| DNA repair protein [Bacillus halodurans C-125] Length = 232 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ + G+++ V+ RE+ + L SA S+I +HNHPSG+P PS DI Sbjct: 133 LYLNTKNQVLHKQTVFIGSLNASIVHPREVFKEALRRSAASLICLHNHPSGDPTPSREDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + I + DH+IIG FVS K + Sbjct: 193 EVTHRLAQVGKLIGIELLDHVIIGDRTFVSLKEKGHL 229 >gi|167621854|ref|YP_001676639.1| DNA repair protein RadC [Caulobacter sp. K31] gi|167351595|gb|ABZ74325.1| DNA repair protein RadC [Caulobacter sp. K31] Length = 223 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 66/97 (68%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N L++ E G++DH PVY RE+++R LEL+ +++IL HNHPSG+P PS DI Sbjct: 127 LFLDRRNQLLSAERLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ +I L I +HDH+I+ A VSF+ +I Sbjct: 187 EMTKTLIEAGKALQIQIHDHMIVAGGAVVSFRANGLI 223 >gi|156740065|ref|YP_001430194.1| DNA repair protein RadC [Roseiflexus castenholzii DSM 13941] gi|189029400|sp|A7NFF4|Y037_ROSCS RecName: Full=UPF0758 protein Rcas_0037 gi|156231393|gb|ABU56176.1| DNA repair protein RadC [Roseiflexus castenholzii DSM 13941] Length = 233 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 56/96 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N + + G+++ V I E+ + + L++ SII+VHNHPSG+P PS DI Sbjct: 133 ICLDTKNRVQKIQTVYVGSLNASMVRIGEVFKEAIRLNSASIIVVHNHPSGDPTPSPEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ +I L+I V DH++IG FVS + + Sbjct: 193 VVTRQMIEAGRLLDIDVLDHLVIGNGRFVSMRERGL 228 >gi|322420385|ref|YP_004199608.1| DNA repair protein RadC [Geobacter sp. M18] gi|320126772|gb|ADW14332.1| DNA repair protein RadC [Geobacter sp. M18] Length = 167 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N ++ ++ S G++ V+ RE + L SA ++IL+HNHP G+P+PS D Sbjct: 72 LHLDNRNRVVCIDMVSTGSLTSSIVHPRETFKTALLSSAAAMILIHNHPGGDPSPSAEDR 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I + DHII+G + SF +I Sbjct: 132 EVTRRLREAGELLGIRILDHIIVGDF-YFSFAEGGLI 167 >gi|148550394|ref|YP_001270496.1| DNA repair protein RadC [Pseudomonas putida F1] gi|148514452|gb|ABQ81312.1| DNA repair protein RadC [Pseudomonas putida F1] Length = 235 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +A E+ RGTID VY RE+V+R L +A ++IL HNHPSG PS D+ Sbjct: 137 LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDV 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T ++ L +++ V DHIIIG +S I Sbjct: 197 HLTLSLKRGLALIDVRVLDHIIIGDGEPLSMVEHGWI 233 >gi|313206016|ref|YP_004045193.1| DNA repair protein radc [Riemerella anatipestifer DSM 15868] gi|312445332|gb|ADQ81687.1| DNA repair protein RadC [Riemerella anatipestifer DSM 15868] gi|315022329|gb|EFT35357.1| DNA repair protein RadC [Riemerella anatipestifer RA-YM] gi|325336543|gb|ADZ12817.1| DNA repair protein [Riemerella anatipestifer RA-GD] Length = 225 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ N ++ + S+G I V +R + + LE AT+II+VHNHPSGN +PS+ D+ Sbjct: 129 IFLNQSNKVLQKKPLSKGGISGTVVDVRLMFKMALEHYATAIIVVHNHPSGNASPSEQDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L+I + DHIII K+ + SF ++ Sbjct: 189 EITKKIKEAGVLLDIRLLDHIIIAKNKYFSFADEGVL 225 >gi|297583749|ref|YP_003699529.1| DNA repair protein RadC [Bacillus selenitireducens MLS10] gi|297142206|gb|ADH98963.1| DNA repair protein RadC [Bacillus selenitireducens MLS10] Length = 228 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL N +I + G+++ V+ REI + L SA S+I +HNHPSG+ PS DI Sbjct: 132 LFLSTKNQVIHRQTIFIGSLNMSVVHPREIFKAALRYSAASMICIHNHPSGDTAPSQEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ ++ + I V DH+I+G +F S K + Sbjct: 192 DVTKRLVEVGKTIGIDVLDHVIVGDHSFCSLKEKGYV 228 >gi|88797504|ref|ZP_01113093.1| DNA repair protein RadC [Reinekea sp. MED297] gi|88779676|gb|EAR10862.1| DNA repair protein RadC [Reinekea sp. MED297] Length = 224 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L + ++A E +GTID VY RE+V+ L +A ++IL HNHPSG PS AD Sbjct: 128 IWLSAQHQVLAFETLFQGTIDTAAVYPREVVKAALRHNAAAVILAHNHPSGIAEPSQADQ 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L +++ + DH+++G+ VSF ++ Sbjct: 188 MITKRLASALMTVDVRLLDHMVVGQGIVVSFAERGLL 224 >gi|309776893|ref|ZP_07671863.1| DNA repair protein RadC [Erysipelotrichaceae bacterium 3_1_53] gi|308915304|gb|EFP61074.1| DNA repair protein RadC [Erysipelotrichaceae bacterium 3_1_53] Length = 229 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ N LIA V GT+ + V+ REI + ++L I+ VHNHPSG+P PS ADI Sbjct: 128 LFLNQKNQLIASRVMFVGTLTNASVHPREIFKEAMQLGCAKILCVHNHPSGDPQPSSADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T++I I + DHII+ ++ + SF ++ Sbjct: 188 SLTKSIEECGVMTAIPLIDHIIVSRNTYFSFAQKGML 224 >gi|239996967|ref|ZP_04717491.1| DNA repair protein RadC [Alteromonas macleodii ATCC 27126] Length = 225 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LIA GTI+ VY RE++++ + +A +IILVHNHPSG PS ADI Sbjct: 128 LMLDSQHQLIAFRTMFNGTINSAAVYPRELIKQVMIDNAAAIILVHNHPSGVAEPSHADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I + + +++ V DH ++G VSF ++ Sbjct: 188 RLTAEIKSAMASIDVPVLDHFVVGDKETVSFAQRGLL 224 >gi|114326624|ref|YP_743782.1| DNA repair protein RadC [Nitrosomonas eutropha C91] gi|114309563|gb|ABI60804.1| DNA repair protein RadC [Nitrosomonas eutropha C91] Length = 173 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ LIA +GT+ VY RE+V+ + +A ++IL H HPS PS AD Sbjct: 77 IFLNSQYRLIAYREMFQGTLTCASVYPREVVKAAISYNAAAVILAHCHPSKETEPSQADK 136 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+ +++ V DHII+G + S + ++ Sbjct: 137 AITKRLKEALDLIDVCVLDHIIVGGNTTKSMAEMGLV 173 >gi|39933462|ref|NP_945738.1| DNA repair protein RadC [Rhodopseudomonas palustris CGA009] gi|39647308|emb|CAE25829.1| possible DNA repair protein RadC [Rhodopseudomonas palustris CGA009] Length = 241 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 64/97 (65%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADE+Q GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI Sbjct: 145 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRGLELSATAVIMVHNHPSGDPTPSQADI 204 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT++I+ PL I VHDHII+GK+ S KGLR+I Sbjct: 205 QMTKSIVAIAEPLGIAVHDHIIVGKNGHASLKGLRLI 241 >gi|172058125|ref|YP_001814585.1| DNA repair protein RadC [Exiguobacterium sibiricum 255-15] gi|171990646|gb|ACB61568.1| DNA repair protein RadC [Exiguobacterium sibiricum 255-15] Length = 217 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I+ + G ++ V+ R+I + + SA S I VHNHPSG+P PS DI Sbjct: 121 LYLNTKNEVISKKTLFIGGLNTSIVHPRDIFREAIRCSAASFIAVHNHPSGDPTPSREDI 180 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +++ ++ + I DH++IG F+S K + Sbjct: 181 EVSERMVEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217 >gi|291550398|emb|CBL26660.1| DNA replication and repair protein RadC [Ruminococcus torques L2-14] Length = 240 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI++ S GTI+ V RE+ L+ +A SIIL+HNHPSG+P PS D+ Sbjct: 137 LLLNTRSRLISEMDVSTGTINSTLVSPRELFVEALQKNAVSIILLHNHPSGDPTPSKEDL 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ I + I + DHIIIG + + S + Sbjct: 197 LTTRRIREAGALIGIELLDHIIIGDNCYFSLREKGF 232 >gi|114045869|ref|YP_736419.1| DNA repair protein RadC [Shewanella sp. MR-7] gi|117922202|ref|YP_871394.1| DNA repair protein RadC [Shewanella sp. ANA-3] gi|123030985|sp|Q0HZU3|Y359_SHESR RecName: Full=UPF0758 protein Shewmr7_0359 gi|166218796|sp|A0L1R9|Y3770_SHESA RecName: Full=UPF0758 protein Shewana3_3770 gi|113887311|gb|ABI41362.1| DNA repair protein RadC [Shewanella sp. MR-7] gi|117614534|gb|ABK49988.1| DNA repair protein RadC [Shewanella sp. ANA-3] Length = 225 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY RE+V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|319795329|ref|YP_004156969.1| DNA repair protein radc [Variovorax paradoxus EPS] gi|315597792|gb|ADU38858.1| DNA repair protein RadC [Variovorax paradoxus EPS] Length = 225 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E RGT+ VY REIV R L A +++L HNHPSG+ PS AD Sbjct: 129 LFLDAQHRLIVLEELFRGTLTQASVYPREIVMRALHHQAAAVVLAHNHPSGSIEPSRADE 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ + L+ +++ V DH+I+ S ++ Sbjct: 189 SLTQTLRAALSLVDVRVIDHVIVSPGQSFSMAEKGVL 225 >gi|119470592|ref|ZP_01613295.1| associated with replication fork DNA repair protein [Alteromonadales bacterium TW-7] gi|119446293|gb|EAW27570.1| associated with replication fork DNA repair protein [Alteromonadales bacterium TW-7] Length = 224 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+ DE+ GTI+ VY RE+V+ L+ +A ++I HNHPSG PS AD Sbjct: 128 LYLDSQNRLVKDEILFYGTINAASVYPREVVKAALKNNAAAVIFAHNHPSGIAEPSQADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L ++I V DHII+G + VSF +I Sbjct: 188 LITNKLQQALQLVDINVLDHIIVGGETCVSFAERGLI 224 >gi|84684609|ref|ZP_01012510.1| DNA repair protein RadC [Maritimibacter alkaliphilus HTCC2654] gi|84667588|gb|EAQ14057.1| DNA repair protein RadC [Rhodobacterales bacterium HTCC2654] Length = 257 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 54/97 (55%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N LIADE + GT+ HVPVY REIV+R LELSA+++ILVHNHPSG+P+PS DI Sbjct: 160 LYLDRKNTLIADEAAAEGTVGHVPVYPREIVKRALELSASALILVHNHPSGDPSPSRDDI 219 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ + + L I +HDHIIIGK VS++ + Sbjct: 220 DMTERVRSAAAALEITLHDHIIIGKSREVSYRSDGYL 256 >gi|312143465|ref|YP_003994911.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus'] gi|311904116|gb|ADQ14557.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus'] Length = 231 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N +IA S+G + V+ RE+ + + S+ ++ILVHNHPSG+P PS D+ Sbjct: 135 ILLDVKNRVIAIPEISKGGLSSSIVHPREVFKEAIRRSSAAVILVHNHPSGDPKPSADDL 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ + + I V DHIII D F+SFK +I Sbjct: 195 NITKKLQKAGEIIGIKVIDHIIIAGDKFLSFKEENLI 231 >gi|288986959|ref|YP_003456922.1| DNA repair protein RadC [Allochromatium vinosum DSM 180] gi|288898338|gb|ADC64172.1| DNA repair protein RadC [Allochromatium vinosum DSM 180] Length = 167 Score = 126 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + ++ + RGTID V+ RE+V+ +E A ++I HNHPSG+ +PS AD Sbjct: 71 LLLDNRHRVLRYQELFRGTIDTAYVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQADR 130 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L + + V DHII+G+ +SF + Sbjct: 131 TLTRKLQDALALIEVRVLDHIIVGEGRGMSFAEQGWL 167 >gi|296283428|ref|ZP_06861426.1| hypothetical protein CbatJ_07394 [Citromicrobium bathyomarinum JL354] Length = 236 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+ D G+ID ++ RE+++R L+L A ++ILVHNHPSGNP PS ADI Sbjct: 140 LYLDTKNRLVQDHHVGDGSIDEASIHPREVIRRGLDLGAAALILVHNHPSGNPEPSRADI 199 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L I VHDH+IIG+ +VS K +I Sbjct: 200 AVTLRIAEAGRLLGIAVHDHVIIGQGRYVSLKAKGLI 236 >gi|188581415|ref|YP_001924860.1| DNA repair protein RadC [Methylobacterium populi BJ001] gi|179344913|gb|ACB80325.1| DNA repair protein RadC [Methylobacterium populi BJ001] Length = 246 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 62/97 (63%), Positives = 79/97 (81%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADEVQ RGT+DH PVY RE+ +R LEL+AT+IIL HNHPSG+P PS ADI Sbjct: 150 LFLDRRNHLIADEVQGRGTVDHTPVYPREVARRALELAATAIILAHNHPSGDPTPSGADI 209 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I++ L+PL I+VHDH+I+G+D S KGL++I Sbjct: 210 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 246 >gi|15600512|ref|NP_254006.1| DNA repair protein RadC [Pseudomonas aeruginosa PAO1] gi|13431808|sp|Q9HTN5|Y5319_PSEAE RecName: Full=UPF0758 protein PA5319 gi|9951636|gb|AAG08704.1|AE004944_8 DNA repair protein RadC [Pseudomonas aeruginosa PAO1] Length = 224 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +++ EV +G+ID VY R++V+R L +A ++IL HNHPSG+ PS AD Sbjct: 128 LFLDTRHRVLSFEVLFQGSIDGASVYPRQVVKRTLAHNAAALILTHNHPSGDARPSLADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DH IIG +S + Sbjct: 188 QLTARLKEALALIDVRVLDHFIIGDGEPLSLAEYGWL 224 >gi|46202447|ref|ZP_00053202.2| COG2003: DNA repair proteins [Magnetospirillum magnetotacticum MS-1] Length = 128 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 49/97 (50%), Positives = 71/97 (73%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADEVQ GT+DH P+Y RE+V+R L L A++I++VHNHPSG+P PS AD+ Sbjct: 32 LFLDRKNTLIADEVQQTGTVDHTPLYPREVVKRALALHASAIVMVHNHPSGDPKPSRADM 91 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + L + I +HDH+++G+ SFK + ++ Sbjct: 92 EMTRAVKDALAAVGIALHDHVVVGRKGHSSFKAMGLL 128 >gi|163745060|ref|ZP_02152420.1| DNA repair protein RadC [Oceanibulbus indolifex HEL-45] gi|161381878|gb|EDQ06287.1| DNA repair protein RadC [Oceanibulbus indolifex HEL-45] Length = 237 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 54/97 (55%), Positives = 76/97 (78%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ NILIADE Q++GT+DHVPVY RE+ +R LEL+A++IILVHNHPSG+P+PS +DI Sbjct: 141 LYLDRKNILIADEEQAKGTVDHVPVYPREVAKRALELNASAIILVHNHPSGDPSPSRSDI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT + T + L + +HDH+IIGK +SF+ + Sbjct: 201 DMTHQVATACDALGLTLHDHLIIGKSRELSFRNEGHL 237 >gi|326202567|ref|ZP_08192435.1| DNA repair protein RadC [Clostridium papyrosolvens DSM 2782] gi|325987151|gb|EGD47979.1| DNA repair protein RadC [Clostridium papyrosolvens DSM 2782] Length = 229 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N ++ S G+++ V+ RE+ ++ SII VHNHPSG+P PS+ D+ Sbjct: 133 ILLDTKNKVLKIVSISTGSLNASIVHPREVFSEAVKCGCNSIIFVHNHPSGDPTPSNEDV 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T ++ + L I V DHII+G +VS K I Sbjct: 193 RTTDRLVNAGDILGIKVLDHIILGDGRYVSLKEKGFI 229 >gi|330952116|gb|EGH52376.1| hypothetical protein PSYCIT7_12239 [Pseudomonas syringae Cit 7] Length = 224 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ RG I+ V+ R++V+R + +A S+IL HNHPSG PS +DI Sbjct: 128 LFLDNKHRVMTFEILFRGRINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ V DH+I+G +S ++ Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVERGLM 224 >gi|227554373|ref|ZP_03984420.1| DNA repair protein RadC [Enterococcus faecalis HH22] gi|227176492|gb|EEI57464.1| DNA repair protein RadC [Enterococcus faecalis HH22] Length = 198 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 99 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 158 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 159 QFTKRMEECGEMMGIQLLDHIILGDSGYISLREENF 194 >gi|78067302|ref|YP_370071.1| DNA repair protein RadC [Burkholderia sp. 383] gi|123567821|sp|Q39DN9|Y5833_BURS3 RecName: Full=UPF0758 protein Bcep18194_A5833 gi|77968047|gb|ABB09427.1| DNA replication and repair protein RadC [Burkholderia sp. 383] Length = 257 Score = 126 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + LI E +RG++ + VY REIV+R + +A ++I+ HNHPSG PS D Sbjct: 161 VYLDARHRLIDMEEITRGSLTRMAVYPREIVRRAMVHNAAALIVAHNHPSGAVQPSAEDR 220 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH++IG SF + Sbjct: 221 RLTRVLHDALALVDVRLLDHVVIGISDTFSFARAGWL 257 >gi|238764329|ref|ZP_04625280.1| DNA repair protein radC [Yersinia kristensenii ATCC 33638] gi|238697480|gb|EEP90246.1| DNA repair protein radC [Yersinia kristensenii ATCC 33638] Length = 95 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 56/95 (58%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 +D + +I E GTI V V+ REIV+ L+++A ++IL HNHPSG PS AD M Sbjct: 1 MDNQHRVIRHEEMFTGTIGSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADRLM 60 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T +I + L+I V DH+++G+ VSF + Sbjct: 61 TTQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 95 >gi|29377390|ref|NP_816544.1| DNA repair protein RadC [Enterococcus faecalis V583] gi|54036236|sp|Q82ZX1|Y2926_ENTFA RecName: Full=UPF0758 protein EF_2926 gi|29344857|gb|AAO82614.1| DNA repair protein RadC [Enterococcus faecalis V583] Length = 232 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 133 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 193 QFTKRMEECGEMMGIQLLDHIILGDSGYISLREENF 228 >gi|290477301|ref|YP_003470222.1| putative associated with replication fork, DNA repair protein [Xenorhabdus bovienii SS-2004] gi|289176655|emb|CBJ83464.1| putative associated with replication fork, DNA repair protein [Xenorhabdus bovienii SS-2004] Length = 230 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 45/97 (46%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL N +I + +GTI+ V V+ REIV++ ++++A SIIL HNHPSGNP PS AD Sbjct: 134 LFLTNQNKVICHDEMFKGTINKVEVHPREIVKQAVKVNAASIILAHNHPSGNPEPSLADK 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + + V DHI+IGK VSF I Sbjct: 194 LVTEKIIDACELVGVKVLDHIVIGKQHCVSFVERGWI 230 >gi|115522133|ref|YP_779044.1| DNA repair protein RadC [Rhodopseudomonas palustris BisA53] gi|115516080|gb|ABJ04064.1| DNA repair protein RadC [Rhodopseudomonas palustris BisA53] Length = 238 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 63/97 (64%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADE+Q GTIDH PVY REIV+R LELSA++I++VHNHPSG+P PS +DI Sbjct: 142 LFLDKRNQLIADELQQVGTIDHTPVYPREIVKRALELSASAIVMVHNHPSGDPTPSQSDI 201 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ II +PL I VHDHII+GK+ S KGL++I Sbjct: 202 QMTKQIIAIADPLGIAVHDHIIVGKNGHASLKGLKLI 238 >gi|197301738|ref|ZP_03166808.1| hypothetical protein RUMLAC_00464 [Ruminococcus lactaris ATCC 29176] gi|197299178|gb|EDY33708.1| hypothetical protein RUMLAC_00464 [Ruminococcus lactaris ATCC 29176] Length = 238 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ LI S GT++ V RE+ L+ +A SIIL+HNHPSG+P PS DI Sbjct: 137 LLLNTKAKLIGASDISVGTVNATLVSPRELFLEALKKNAVSIILLHNHPSGDPTPSQEDI 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +TQ + + + I + DHIIIG + ++S + Sbjct: 197 LLTQRVRKAGDLIGIELLDHIIIGDNRYISLREKGF 232 >gi|325263906|ref|ZP_08130639.1| DNA repair protein RadC [Clostridium sp. D5] gi|324030944|gb|EGB92226.1| DNA repair protein RadC [Clostridium sp. D5] Length = 231 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ LI + S+GT++ + RE+ L+ +A SI+L+HNHPSG+P PS DI Sbjct: 135 LLLNTKTRLIGETDISKGTVNSAVISPRELFVEALQKNAVSIVLLHNHPSGDPAPSKDDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I + DHI+IG + ++S + +I Sbjct: 195 LVTRRIKDAGALIGIELLDHIVIGNNCYISMREKGLI 231 >gi|260877938|ref|ZP_05890293.1| DNA repair protein [Vibrio parahaemolyticus AN-5034] gi|308089871|gb|EFO39566.1| DNA repair protein [Vibrio parahaemolyticus AN-5034] Length = 157 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I + +GTID VY RE+V+ LE++A ++IL HNHPSG+P+PS AD Sbjct: 62 LLLDNQHRVIEFKSLFKGTIDSASVYPREVVKSVLEVNAAAVILAHNHPSGDPSPSQADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I L +++ V DHI++G+ + VSF + Sbjct: 122 RITRKLIDALALVDVRVLDHIVVGESS-VSFAEKGWL 157 >gi|300690691|ref|YP_003751686.1| DNA repair protein radC homolog, associated with replication fork [Ralstonia solanacearum PSI07] gi|299077751|emb|CBJ50389.1| DNA repair protein radC homolog, associated with replication fork [Ralstonia solanacearum PSI07] Length = 224 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 59/95 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E +GT+ VY REI +R L +A+++IL HNHP+G+ PS++D+ Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALYHNASAVILSHNHPTGHVEPSESDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + L L++ + DH+I+G+ SF Sbjct: 188 MLTRELCRALALLDVRILDHMIVGRTQVYSFLEHG 222 >gi|188990452|ref|YP_001902462.1| DNA repair protein radC homolog [Xanthomonas campestris pv. campestris str. B100] gi|167732212|emb|CAP50404.1| DNA repair protein radC homolog [Xanthomonas campestris pv. campestris] Length = 159 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 56/96 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E GTID V+ R + +R LELSA ++IL HNHPSGNP PS+AD Sbjct: 63 LFLDTQHQVLTTEHLFTGTIDGCDVHPRVVARRALELSAAAVILFHNHPSGNPEPSEADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + L L+I + DH++IG S Sbjct: 123 KVTERLKQALGLLDIRLLDHLVIGGRQHTSLAARGW 158 >gi|120609194|ref|YP_968872.1| DNA repair protein RadC [Acidovorax citrulli AAC00-1] gi|120587658|gb|ABM31098.1| DNA repair protein RadC [Acidovorax citrulli AAC00-1] Length = 167 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N IA E RGTI+ VY R IV+R ++L+A+S+ILVHNHPSG SDAD Sbjct: 71 VFLDCQNRAIAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADR 130 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I +L +++ V DH+I+G SF ++ Sbjct: 131 GLTERICASLGLIDVRVVDHVIVGSGTPYSFAEAGLL 167 >gi|126724639|ref|ZP_01740482.1| DNA repair protein RadC [Rhodobacterales bacterium HTCC2150] gi|126705803|gb|EBA04893.1| DNA repair protein RadC [Rhodobacterales bacterium HTCC2150] Length = 253 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 56/97 (57%), Positives = 71/97 (73%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+LI DE RGT+DHVPVY RE+ +R LE+SA+++ILVHNHPSG+P PS DI Sbjct: 157 LFLDRKNVLITDEALGRGTVDHVPVYPREVAKRGLEVSASAVILVHNHPSGDPTPSGPDI 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MTQ I L L I +HDH+IIGK +SF+ +I Sbjct: 217 QMTQEIDNALTTLGIKLHDHLIIGKFGEISFRAEGLI 253 >gi|254419921|ref|ZP_05033645.1| DNA repair protein RadC [Brevundimonas sp. BAL3] gi|196186098|gb|EDX81074.1| DNA repair protein RadC [Brevundimonas sp. BAL3] Length = 228 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 50/97 (51%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N+L+ DE + GT+DH PVY RE+V+R LELSA+++ILVHNHPSG+P PS ADI Sbjct: 132 LYLDRRNLLLKDEWVADGTVDHAPVYPREVVRRALELSASAMILVHNHPSGDPAPSRADI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ ++ + VHDH+++G++ SFK L +I Sbjct: 192 EMTRRVVDAARVFGLDVHDHLVVGREGTASFKSLGLI 228 >gi|127514409|ref|YP_001095606.1| DNA repair protein RadC [Shewanella loihica PV-4] gi|126639704|gb|ABO25347.1| DNA repair protein RadC [Shewanella loihica PV-4] Length = 233 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY RE+V LE A ++I+ HNHPSG PS AD Sbjct: 136 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGGAEPSHADR 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 196 RITERLKYALATIDVSLLDHMVVGDREIVSFAERGWI 232 >gi|224476750|ref|YP_002634356.1| putative DNA repair protein RadC [Staphylococcus carnosus subsp. carnosus TM300] gi|254789659|sp|B9DNE3|Y1264_STACT RecName: Full=UPF0758 protein Sca_1264 gi|222421357|emb|CAL28171.1| putative DNA repair protein RadC [Staphylococcus carnosus subsp. carnosus TM300] Length = 226 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N++I EV GT++ V+ RE+ + ++ S+ +II+VHNHPSG+ PS DI Sbjct: 128 LFLNSKNVVIRHEVIFVGTLNSSIVHPREVFKAAIKWSSNAIIVVHNHPSGDVTPSKEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + L I + DHIIIG ++S Sbjct: 188 LTTKRLQECGRVLGIELLDHIIIGDAKYLSMVEGGY 223 >gi|124004623|ref|ZP_01689467.1| DNA repair protein RadC [Microscilla marina ATCC 23134] gi|123989746|gb|EAY29275.1| DNA repair protein RadC [Microscilla marina ATCC 23134] Length = 266 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+K N++I E S G + + I ++ +E A+SII+VHNHPSGN PS ADI Sbjct: 170 VMLNKSNVVIKKEQISSGGVSGTIADPKVIFKKAIEALASSIIVVHNHPSGNLQPSQADI 229 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+I V DH+I + SF ++ Sbjct: 230 GLTRKLAEAGKMLDIPVLDHMIFTDYNYYSFADEGMM 266 >gi|172048651|sp|A5WB02|Y5194_PSEP1 RecName: Full=UPF0758 protein Pput_5194 Length = 226 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +A E+ RGTID VY RE+V+R L +A ++IL HNHPSG PS D+ Sbjct: 128 LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDV 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T ++ L +++ V DHIIIG +S I Sbjct: 188 HLTLSLKRGLALIDVRVLDHIIIGDGEPLSMVEHGWI 224 >gi|332139456|ref|YP_004425194.1| DNA repair protein RadC [Alteromonas macleodii str. 'Deep ecotype'] gi|238693291|sp|B4S2B7|Y049_ALTMD RecName: Full=UPF0758 protein MADE_00049 gi|327549478|gb|AEA96196.1| DNA repair protein RadC [Alteromonas macleodii str. 'Deep ecotype'] Length = 225 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LIA GTI+ VY RE++++ + +A +IILVHNHPSG PS ADI Sbjct: 128 LMLDSQHQLIAFRTMFNGTINSAAVYPRELIKQVMIDNAAAIILVHNHPSGVAEPSHADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I + + +++ V DH ++G +SF ++ Sbjct: 188 RLTTEIKSAMASIDVPVLDHFVVGDKETISFAQRGLL 224 >gi|228967535|ref|ZP_04128562.1| DNA repair protein radC [Bacillus thuringiensis serovar sotto str. T04001] gi|228792190|gb|EEM39765.1| DNA repair protein radC [Bacillus thuringiensis serovar sotto str. T04001] Length = 102 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 6 LYLNTKNQVLHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 65 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHIIIG FVS K I Sbjct: 66 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 102 >gi|154504386|ref|ZP_02041124.1| hypothetical protein RUMGNA_01890 [Ruminococcus gnavus ATCC 29149] gi|153795315|gb|EDN77735.1| hypothetical protein RUMGNA_01890 [Ruminococcus gnavus ATCC 29149] Length = 231 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI + S+GT++ + RE+ L+ +A SI+L+HNHPSG+P PS D+ Sbjct: 134 LLLNTKSRLIGETDISKGTVNSAVISPRELFVEALQKNAVSIVLLHNHPSGDPTPSKEDV 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + + + DHI+IG + +VS + ++ Sbjct: 194 LITRRIQEAGRLIGVELLDHIVIGDNCYVSLREKGLV 230 >gi|319898913|ref|YP_004159006.1| DNA repair protein RadC [Bartonella clarridgeiae 73] gi|319402877|emb|CBI76428.1| DNA repair protein RadC [Bartonella clarridgeiae 73] Length = 261 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LI+DEVQ GTIDH PVY RE++ R LELSA+ +IL+HNHPSGN +PS ADI Sbjct: 165 LFLDKRNGLISDEVQQTGTIDHTPVYPREVISRALELSASGLILIHNHPSGNASPSKADI 224 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT + N L I +HDHIII ++ + SFK L++I Sbjct: 225 SMTYRLKDAANALEITIHDHIIIARNNYTSFKELKLI 261 >gi|103486559|ref|YP_616120.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256] gi|98976636|gb|ABF52787.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256] Length = 272 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 45/97 (46%), Positives = 68/97 (70%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N+LI DE+ S G+ID +Y+RE+++R LEL A++II+VHNHPSG+P PS DI Sbjct: 176 LYLNSRNMLIRDELASEGSIDQSAIYVREVIRRALELGASAIIIVHNHPSGSPEPSRQDI 235 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L I++HDHII+ + SF+ L ++ Sbjct: 236 AVTREIAEAGTRLGIVLHDHIIVAGSDYRSFRALGLL 272 >gi|256850919|ref|ZP_05556308.1| DNA repair protein RadC [Lactobacillus jensenii 27-2-CHN] gi|260661133|ref|ZP_05862047.1| DNA repair protein RadC [Lactobacillus jensenii 115-3-CHN] gi|282934169|ref|ZP_06339447.1| DNA repair protein RadC [Lactobacillus jensenii 208-1] gi|297205797|ref|ZP_06923192.1| DNA repair protein RadC [Lactobacillus jensenii JV-V16] gi|256615981|gb|EEU21169.1| DNA repair protein RadC [Lactobacillus jensenii 27-2-CHN] gi|260548070|gb|EEX24046.1| DNA repair protein RadC [Lactobacillus jensenii 115-3-CHN] gi|281301783|gb|EFA94049.1| DNA repair protein RadC [Lactobacillus jensenii 208-1] gi|297148923|gb|EFH29221.1| DNA repair protein RadC [Lactobacillus jensenii JV-V16] Length = 207 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N ++ + + +GT++ V+ R+I + + ++ I++ HNHPSG+ NPS DI Sbjct: 111 IYLDNKNKVLGERLLFQGTVNRSVVHPRDIFRWAVFYNSVGILIAHNHPSGDANPSQKDI 170 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I + + I DHII+ +++SFK ++I Sbjct: 171 EFTKQINKASDLMGINFLDHIIVADRSYLSFKEEQLI 207 >gi|81428462|ref|YP_395462.1| DNA repair protein (RadC) [Lactobacillus sakei subsp. sakei 23K] gi|123564345|sp|Q38XC8|Y852_LACSS RecName: Full=UPF0758 protein LCA_0852 gi|78610104|emb|CAI55153.1| DNA repair protein (RadC) [Lactobacillus sakei subsp. sakei 23K] Length = 224 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + GT++ + RE+ + ++ SA ILVHNHPSG PS DI Sbjct: 126 VYLDVKNQIIQIKQLYLGTLNSSVAHPREVFKWAVQYSAAKFILVHNHPSGQLAPSTQDI 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N T+ I+ + I DH+IIG ++S + + Sbjct: 186 NFTKRIVNCGQLMGITCLDHLIIGSSQYLSLREEGYL 222 >gi|20807378|ref|NP_622549.1| DNA repair proteins [Thermoanaerobacter tengcongensis MB4] gi|25009024|sp|Q8RBC5|Y897_THETN RecName: Full=UPF0758 protein TTE0897 gi|20515897|gb|AAM24153.1| DNA repair proteins [Thermoanaerobacter tengcongensis MB4] Length = 233 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +IA E S G+++ V+ RE+ + +E SA+SIILVHNHPSG+P PS D+ Sbjct: 134 VMLNVKNKIIAIETISIGSLNTSIVHPREVFKAAIERSASSIILVHNHPSGDPTPSREDV 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ ++ N L I V DH+IIG +S K Sbjct: 194 EVTKRLVEAGNILGIKVLDHVIIGDGRGISLKEKGY 229 >gi|189423347|ref|YP_001950524.1| DNA repair protein RadC [Geobacter lovleyi SZ] gi|189419606|gb|ACD94004.1| DNA repair protein RadC [Geobacter lovleyi SZ] Length = 163 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N ++ + S G+++ V+ RE+ + +A +++LVHNHP+G+P PS DI Sbjct: 67 LHLDGKNRIVCFDRVSIGSLNQAIVHSREVFKTACLSNAAAVLLVHNHPTGDPTPSQEDI 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L I V DHII+G D F+SF ++ Sbjct: 127 AITRRLKESGEILGIKVLDHIIVGDDEFLSFVERGLL 163 >gi|56475876|ref|YP_157465.1| DNA repair protein, radC [Aromatoleum aromaticum EbN1] gi|81677578|sp|Q5P7Z7|Y442_AZOSE RecName: Full=UPF0758 protein AZOSEA04420 gi|56311919|emb|CAI06564.1| DNA repair protein, radC [Aromatoleum aromaticum EbN1] Length = 225 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI RGT+ VY RE+V+ L +A ++IL HNHPSG PS AD Sbjct: 128 LLLDARNRLIEAVELFRGTLTQTSVYPREVVKLALARNAAAVILAHNHPSGAAEPSPADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKD-AFVSFKGLRII 97 +T+++ L ++I V DH I+ +SF ++ Sbjct: 188 LLTRSLKQALELVDIRVLDHFIVTAHAQPLSFAERGLL 225 >gi|332036123|gb|EGI72599.1| DNA repair protein RadC [Pseudoalteromonas haloplanktis ANT/505] Length = 224 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+ DE+ GTI+ VY RE+V+ L+ +A ++I HNHPSG PS AD Sbjct: 128 LYLDSQNRLVKDEILFYGTINSASVYPREVVKAALKNNAAAVIFAHNHPSGIAEPSQADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L ++I V DHII+G + VSF +I Sbjct: 188 LITNKLQQALQLVDISVLDHIIVGGETCVSFAERGLI 224 >gi|225567950|ref|ZP_03776975.1| hypothetical protein CLOHYLEM_04023 [Clostridium hylemonae DSM 15053] gi|225163238|gb|EEG75857.1| hypothetical protein CLOHYLEM_04023 [Clostridium hylemonae DSM 15053] Length = 230 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI + S+GT++ + RE+ L+ +A +II++HNHPSG+P+PS D Sbjct: 134 LMLNSKSKLIGETDISKGTVNASLITPRELFIEALQKNAVAIIVLHNHPSGDPSPSREDR 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I + I + DH+IIG + ++SF+ I+ Sbjct: 194 LLTQRIREAGALIGIDLLDHVIIGNNCYMSFREEGIL 230 >gi|26991960|ref|NP_747385.1| DNA repair protein RadC [Pseudomonas putida KT2440] gi|37999603|sp|Q88C97|Y5284_PSEPK RecName: Full=UPF0758 protein PP_5284 gi|24987089|gb|AAN70849.1|AE016729_7 DNA repair protein RadC [Pseudomonas putida KT2440] Length = 226 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +A E+ RGTID VY RE+V+R L +A ++IL HNHPSG PS D+ Sbjct: 128 LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDV 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T ++ L +++ V DHIIIG +S I Sbjct: 188 HLTLSLKRGLALIDVRVLDHIIIGDGEPLSMVEHGWI 224 >gi|289434829|ref|YP_003464701.1| DNA repair protein RadC [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171073|emb|CBH27615.1| DNA repair protein RadC [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 224 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N +I + G ++ V+ RE+ + L SA S++ HNHPSG+P+PS D+ Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASLMCFHNHPSGDPSPSSEDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ ++ N + I + DHIIIGK+ ++S K Sbjct: 188 LVTKRLVEAGNIIGITLLDHIIIGKNKYISLKEKGY 223 >gi|85712366|ref|ZP_01043416.1| DNA repair protein RadC [Idiomarina baltica OS145] gi|85693809|gb|EAQ31757.1| DNA repair protein RadC [Idiomarina baltica OS145] Length = 157 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + +D + LI + GTI+ PVY RE+++ L+ +A +IIL HNHPSG PS+AD Sbjct: 62 MLMDSQHRLIEYKELFFGTINAAPVYPREVMKEVLQQNAAAIILAHNHPSGVTEPSEADK 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I LN +++ V DHI++G+D VSF ++ Sbjct: 122 RVTTRIKDALNHIDVPVLDHIVVGQDT-VSFAERGLV 157 >gi|319405664|emb|CBI79287.1| DNA repair protein RadC [Bartonella sp. AR 15-3] Length = 264 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 57/97 (58%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LI+DEVQ GTIDH PVY RE++ R L+LSA+ +IL+HNHPSGN +PS ADI Sbjct: 168 LFLDKRNGLISDEVQQTGTIDHTPVYPREVISRALQLSASGLILIHNHPSGNASPSKADI 227 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT + N L I +HDHIII ++ + SFK L++I Sbjct: 228 SMTHRLKDAANALEITIHDHIIIARNNYTSFKELKLI 264 >gi|315303311|ref|ZP_07873944.1| putative DNA repair protein [Listeria ivanovii FSL F6-596] gi|313628326|gb|EFR96826.1| putative DNA repair protein [Listeria ivanovii FSL F6-596] Length = 224 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 56/96 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N +I + G ++ V+ RE+ + L SA SI+ HNHPSG+P PS D+ Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPTPSSEDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ ++ + + I + DHIIIGK+ ++S K Sbjct: 188 LVTKRLVEAGSIIGITLLDHIIIGKNKYISLKEKGY 223 >gi|258516472|ref|YP_003192694.1| DNA repair protein RadC [Desulfotomaculum acetoxidans DSM 771] gi|257780177|gb|ACV64071.1| DNA repair protein RadC [Desulfotomaculum acetoxidans DSM 771] Length = 233 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +++ E S GT+ V+ RE+ + ++ SA ++IL+HNHPSG+P PS DI Sbjct: 137 MLLNTKNRVLSLETISVGTLSSSAVHPRELFKIAIKKSAAALILIHNHPSGDPAPSKEDI 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ + + I V DHIIIG + FVS K + Sbjct: 197 DVTKRLEEAGKIIGIDVLDHIIIGDNKFVSLKVKGL 232 >gi|299065959|emb|CBJ37140.1| DNA repair protein radC homolog, associated with replication fork [Ralstonia solanacearum CMR15] Length = 224 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 59/95 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E +GT+ VY REI +R L +A+++IL HNHP+G+ PS++D+ Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALHHNASALILSHNHPTGHVEPSESDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + L L++ V DH+I+G+ SF Sbjct: 188 MLTRELCRALALLDVRVLDHMIVGRAEVYSFLEHG 222 >gi|319408552|emb|CBI82205.1| DNA repair protein RadC [Bartonella schoenbuchensis R1] Length = 264 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 59/97 (60%), Positives = 74/97 (76%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N L++DEVQ GTIDH PVY RE+V R LELSA+ +ILVHNHPSG+ PSDADI Sbjct: 168 LFLDKKNGLLSDEVQQTGTIDHTPVYPREVVSRALELSASGLILVHNHPSGDATPSDADI 227 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT + N L II+HDH+II ++ + SFK L++I Sbjct: 228 SMTYRLKDIANALGIILHDHLIIARNDYTSFKALKLI 264 >gi|116872978|ref|YP_849759.1| DNA repair protein RadC [Listeria welshimeri serovar 6b str. SLCC5334] gi|123461096|sp|A0AIZ8|Y1562_LISW6 RecName: Full=UPF0758 protein lwe1562 gi|116741856|emb|CAK20980.1| DNA repair protein RadC homolog [Listeria welshimeri serovar 6b str. SLCC5334] Length = 224 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 56/96 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N +I + G ++ V+ RE+ + L S+ +I+ HNHPSG+P PS D+ Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSSAAIMCFHNHPSGDPTPSSEDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ ++ N + I + DHIIIGK+ ++S K Sbjct: 188 LVTKRLVEAGNIIGITLLDHIIIGKNKYISLKEKGY 223 >gi|313623636|gb|EFR93796.1| putative DNA repair protein [Listeria innocua FSL J1-023] Length = 224 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N +I + G ++ V+ RE+ + L S+ SI+ HNHPSG+P PS D+ Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSSASIMCFHNHPSGDPTPSSEDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + N + I + DHIIIGK+ ++S K Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223 >gi|170719373|ref|YP_001747061.1| DNA repair protein RadC [Pseudomonas putida W619] gi|229485561|sp|B1J4M1|Y186_PSEPW RecName: Full=UPF0758 protein PputW619_0186 gi|169757376|gb|ACA70692.1| DNA repair protein RadC [Pseudomonas putida W619] Length = 226 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +A E+ RGTID +Y RE+V+R L +A ++IL HNHPSGN PS D+ Sbjct: 128 LFLDSKHRPLAFEILFRGTIDRASIYPREVVRRSLMHNAAALILCHNHPSGNSEPSQDDV 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT + L +++ V DHII+G +S I Sbjct: 188 HMTLALKRGLALIDVRVLDHIIVGDGEPLSMVEQGWI 224 >gi|315127738|ref|YP_004069741.1| replication fork DNA repair protein-associated protein [Pseudoalteromonas sp. SM9913] gi|315016252|gb|ADT69590.1| replication fork DNA repair protein-associated protein [Pseudoalteromonas sp. SM9913] Length = 224 Score = 125 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+ DE+ GTI+ VY RE+V+ L+ +A ++I HNHPSG PS AD Sbjct: 128 LYLDSQNRLLKDEILFYGTINAASVYPREVVKAALKNNAAAVIFSHNHPSGIAEPSQADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L ++I V DHIIIG ++ VSF +I Sbjct: 188 LITNKLCQALQLVDINVLDHIIIGGESSVSFAERGLI 224 >gi|152983064|ref|YP_001352677.1| DNA repair protein RadC [Janthinobacterium sp. Marseille] gi|151283141|gb|ABR91551.1| DNA repair protein RadC [Janthinobacterium sp. Marseille] Length = 190 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F+D + ++A E GTI VY R IVQR + L+A S+IL HNHPSG+ +PS+AD Sbjct: 93 VFMDTQHRVLAYEPLFFGTIHQTSVYPRAIVQRAMSLNAASMILAHNHPSGSTHPSEADK 152 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + L +++ V DH IIG++ SF ++ Sbjct: 153 QLTNRLKSLLESIDVRVLDHFIIGEEGTFSFAEHGLL 189 >gi|167036321|ref|YP_001671552.1| DNA repair protein RadC [Pseudomonas putida GB-1] gi|189029399|sp|B0KQ87|Y5335_PSEPG RecName: Full=UPF0758 protein PputGB1_5335 gi|166862809|gb|ABZ01217.1| DNA repair protein RadC [Pseudomonas putida GB-1] Length = 226 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +A E+ RGTID VY RE+V+R L +A ++IL HNHPSG+ PS D+ Sbjct: 128 LFLDSKHRPLAFEILFRGTIDRASVYPREVVRRALLHNAAALILCHNHPSGSSEPSQDDV 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T ++ L +++ V DHIIIG +S I Sbjct: 188 HLTLSLKRGLALIDVRVLDHIIIGDGEPLSMVEHGWI 224 >gi|313633115|gb|EFS00011.1| putative DNA repair protein [Listeria seeligeri FSL N1-067] gi|313637692|gb|EFS03068.1| putative DNA repair protein [Listeria seeligeri FSL S4-171] Length = 224 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N +I + G ++ V+ RE+ + L SA S++ HNHPSG+P+PS D+ Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASLMCFHNHPSGDPSPSSEDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ ++ N + I + DHIIIGK+ ++S K Sbjct: 188 LVTKRLVEAGNIIGITLLDHIIIGKNKYISLKEKGY 223 >gi|119898338|ref|YP_933551.1| DNA repair protein [Azoarcus sp. BH72] gi|119670751|emb|CAL94664.1| DNA repair protein [Azoarcus sp. BH72] Length = 196 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LI E RGT+ VY REI++R LEL A +I H HPSG PS AD Sbjct: 100 LYLDAQNRLIRAEEAFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADE 159 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + L +++ V DHI++ D VSF + Sbjct: 160 VLTNMLKSALTLVDVRVLDHIVVAGDRAVSFAETGRL 196 >gi|167758182|ref|ZP_02430309.1| hypothetical protein CLOSCI_00520 [Clostridium scindens ATCC 35704] gi|167664079|gb|EDS08209.1| hypothetical protein CLOSCI_00520 [Clostridium scindens ATCC 35704] Length = 230 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI + S+GT++ + RE+ L+ +A SI+++HNHPSG+P PS D+ Sbjct: 134 LMLNSKSRLIGETDISKGTVNASLITPRELFIEALQKNAVSIVIMHNHPSGDPTPSREDM 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I+ + I + DHIIIG + ++SF+ ++ Sbjct: 194 LTTKRILDAGALIGIELLDHIIIGNNCYISFREEGLL 230 >gi|17547163|ref|NP_520565.1| DNA repair protein RadC [Ralstonia solanacearum GMI1000] gi|25009031|sp|Q8XWN0|Y2444_RALSO RecName: Full=UPF0758 protein RSc2444 gi|17429465|emb|CAD16151.1| probable dna repair protein radc homolog [Ralstonia solanacearum GMI1000] Length = 224 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 59/95 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E +GT+ VY REI +R L +A+++IL HNHP+G+ PS++D+ Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALHHNASALILSHNHPTGHVEPSESDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + L L++ V DH+I+G+ SF Sbjct: 188 VLTRELCRALALLDVRVLDHMIVGRAEVYSFLEHG 222 >gi|124267880|ref|YP_001021884.1| DNA repair protein RadC [Methylibium petroleiphilum PM1] gi|171769841|sp|A2SJB0|Y2695_METPP RecName: Full=UPF0758 protein Mpe_A2695 gi|124260655|gb|ABM95649.1| DNA repair protein radC family [Methylibium petroleiphilum PM1] Length = 222 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+A E RGT++ VY RE+V+R L L+A + IL HNHPSG PS AD Sbjct: 126 LFLDTQHRLLAFEELFRGTLNQASVYPREVVKRALALNAAAAILAHNHPSGVAEPSRADE 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH ++ + + VSF ++ Sbjct: 186 ALTQALKAALALVDVRVLDHFVVARGSVVSFAERGLL 222 >gi|302386425|ref|YP_003822247.1| DNA repair protein RadC [Clostridium saccharolyticum WM1] gi|302197053|gb|ADL04624.1| DNA repair protein RadC [Clostridium saccharolyticum WM1] Length = 231 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 59/96 (61%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L+ LI D + S+GT++ V REI ++ A S++LVHNHPSG+P+PS D++ Sbjct: 136 LLNTKGSLIRDIMISQGTVNASAVSPREIFIEAMKYHAVSLVLVHNHPSGDPSPSREDLS 195 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + + I + DHIIIG ++++S K I+ Sbjct: 196 FTRRVKEAGDLVGIRLLDHIIIGDNSYISLKERGIL 231 >gi|240138796|ref|YP_002963269.1| DNA repair protein RadC [Methylobacterium extorquens AM1] gi|240008766|gb|ACS39992.1| DNA repair protein RadC [Methylobacterium extorquens AM1] Length = 248 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 60/97 (61%), Positives = 78/97 (80%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADEV RGT+DH PVY RE+ +R LEL++T+IIL HNHPSG+P PS ADI Sbjct: 152 LFLDRRNHLIADEVLGRGTVDHTPVYPREVARRALELASTAIILAHNHPSGDPAPSKADI 211 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I++ L+PL I+VHDH+I+G+D S KGL++I Sbjct: 212 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 248 >gi|212635015|ref|YP_002311540.1| DNA repair protein RadC [Shewanella piezotolerans WP3] gi|226736630|sp|B8CM29|Y2203_SHEPW RecName: Full=UPF0758 protein swp_2203 gi|212556499|gb|ACJ28953.1| DNA repair protein RadC [Shewanella piezotolerans WP3] Length = 225 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTI+ VY R++V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTINSASVYPRDVVGLVLEKKAAAVIVCHNHPSGIAEPSTADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKQALQTIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|91791693|ref|YP_561344.1| DNA repair protein RadC [Shewanella denitrificans OS217] gi|122969048|sp|Q12SF5|Y326_SHEDO RecName: Full=UPF0758 protein Sden_0326 gi|91713695|gb|ABE53621.1| DNA repair protein RadC [Shewanella denitrificans OS217] Length = 225 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY RE+V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKRAAAVIICHNHPSGIAEPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF + Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDFEIVSFAERGWL 224 >gi|253583728|ref|ZP_04860926.1| DNA repair protein RadC [Fusobacterium varium ATCC 27725] gi|251834300|gb|EES62863.1| DNA repair protein RadC [Fusobacterium varium ATCC 27725] Length = 229 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 47/97 (48%), Positives = 63/97 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N LIA E GTID VY REIV+R ++ A S++ HNHPSGN +PS DI Sbjct: 131 LFLNSANNLIASETLFYGTIDKSAVYPREIVERVIKNGAKSVVFAHNHPSGNISPSKQDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ++ +L L+I + DHIII KD++ SF +I Sbjct: 191 ELTQHMYDSLKTLDIRLIDHIIITKDSYFSFLEEGLI 227 >gi|83649010|ref|YP_437445.1| DNA repair protein [Hahella chejuensis KCTC 2396] gi|83637053|gb|ABC33020.1| DNA repair protein [Hahella chejuensis KCTC 2396] Length = 207 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 45/98 (45%), Positives = 62/98 (63%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N LI+ E GTID VY REIV+R L L+A ++IL HNHPSG PS ADI Sbjct: 108 MFLDNQNRLISFEKLFYGTIDQASVYPREIVKRALMLNAAAVILAHNHPSGMSEPSVADI 167 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 MT+ + ++L +++ V DHI++G + VSF + Sbjct: 168 AMTKTVKSSLALIDVRVLDHIVVGSDGSSVSFIERGYM 205 >gi|294084235|ref|YP_003550993.1| DNA repair protein RadC [Candidatus Puniceispirillum marinum IMCC1322] gi|292663808|gb|ADE38909.1| DNA repair protein RadC [Candidatus Puniceispirillum marinum IMCC1322] Length = 247 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 49/97 (50%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LIA+E S+GT+D PVY+RE+V L+ A S ILVHNHPSG PS ADI Sbjct: 151 LCLDNQNRLIAEETLSKGTVDQTPVYVREVVNAALKHHAQSSILVHNHPSGEAEPSRADI 210 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I LN ++I +HDH+I+ VS K L + Sbjct: 211 EMTLAIQDALNIMSINLHDHLIVAGKQCVSLKTLGYL 247 >gi|257094371|ref|YP_003168012.1| DNA repair protein RadC [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046895|gb|ACV36083.1| DNA repair protein RadC [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 225 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LIA E RGT+ VY RE+V++ L +A +++L HNHPSG PS AD Sbjct: 128 LWLDAQNRLIASEELFRGTLTQTSVYPREVVKKALYHNAAAVVLAHNHPSGVAEPSRADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRII 97 +T ++ L + + V DH I+ + +SF ++ Sbjct: 188 LLTADLKQVLALVEVRVLDHFIVAAQSPPLSFAERGLL 225 >gi|90419162|ref|ZP_01227072.1| DNA repair protein [Aurantimonas manganoxydans SI85-9A1] gi|90336099|gb|EAS49840.1| DNA repair protein [Aurantimonas manganoxydans SI85-9A1] Length = 257 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 69/97 (71%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 161 LFLDKKNALIADEVQGTGTVDHTPVYTREVVKRGLELSATAIILVHNHPSGDPTPSRADI 220 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ II T PL I VHDHIIIGK+ S KGLR+I Sbjct: 221 EMTRTIIDTAKPLGIAVHDHIIIGKNGHASLKGLRLI 257 >gi|319404226|emb|CBI77819.1| DNA repair protein RadC [Bartonella rochalimae ATCC BAA-1498] Length = 264 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LI+DEVQ GTIDH PVY RE++ R LELSA+ +IL+HNHPSGN +PS ADI Sbjct: 168 LFLDKRNGLISDEVQQTGTIDHTPVYPREVISRALELSASGLILIHNHPSGNASPSKADI 227 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT + N L I +HDHIII ++ + SFK L++I Sbjct: 228 SMTYRLKDAANALEITIHDHIIIARNNYTSFKELKLI 264 >gi|309783369|ref|ZP_07678079.1| DNA repair protein RadC-like protein [Ralstonia sp. 5_7_47FAA] gi|308917913|gb|EFP63600.1| DNA repair protein RadC-like protein [Ralstonia sp. 5_7_47FAA] Length = 164 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N +I RGT+ VY RE+V+ L L+A ++I HNHPSG P PS AD Sbjct: 68 IFLDAQNRVIEYIELFRGTLTQTSVYPREVVKTSLRLNAAAVIFAHNHPSGVPEPSRADE 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ + L +++ V DH+I+ A VSF ++ Sbjct: 128 NLTKVLKDALALVDVRVLDHVIVAGGASVSFAQRGLL 164 >gi|325982099|ref|YP_004294501.1| DNA repair protein RadC [Nitrosomonas sp. AL212] gi|325531618|gb|ADZ26339.1| DNA repair protein RadC [Nitrosomonas sp. AL212] Length = 224 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N IA E GT+ VY REI++R L +A ++I HNHPSG PS AD Sbjct: 128 IFLDAKNHAIATEELFSGTLTQASVYPREIIKRALYHNAAAVIFAHNHPSGIAEPSHADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ++ L+ +++ V DH I+G +SF +I Sbjct: 188 VLTQSLKQALSLVDVQVLDHFIVGNGTALSFSEHDLI 224 >gi|171855257|sp|A3QIP9|Y3481_SHELP RecName: Full=UPF0758 protein Shew_3481 Length = 225 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY RE+V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGGAEPSHADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKYALATIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|226940826|ref|YP_002795900.1| RadC [Laribacter hongkongensis HLHK9] gi|254789654|sp|C1D8V1|Y1907_LARHH RecName: Full=UPF0758 protein LHK_01907 gi|226715753|gb|ACO74891.1| RadC [Laribacter hongkongensis HLHK9] Length = 226 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N L+A E + GT+ VY RE+V+ L A ++IL HNHPSG+ PS AD Sbjct: 128 LCLDARNRLLAVEEVAHGTLTESRVYPREVVKAALRQHAVAVILAHNHPSGDSGPSLADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH++I + SF + Sbjct: 188 ELTEALGRALALVDVRLLDHLVISRQGCTSFAECGWL 224 >gi|94311291|ref|YP_584501.1| DNA repair protein RadC [Cupriavidus metallidurans CH34] gi|254241444|ref|ZP_04934766.1| hypothetical protein PA2G_02139 [Pseudomonas aeruginosa 2192] gi|24461569|gb|AAN62140.1|AF440523_47 putative DNA repair protein RadC [Pseudomonas aeruginosa] gi|93355143|gb|ABF09232.1| DNA binding protein, possibly associated to lesions [Cupriavidus metallidurans CH34] gi|126194822|gb|EAZ58885.1| hypothetical protein PA2G_02139 [Pseudomonas aeruginosa 2192] Length = 164 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E RGTI+ VY R +VQR L+L+A +++ H HPSG PS AD Sbjct: 68 VFLDSMHQVLAYEPLFRGTINATSVYPRVVVQRVLQLNAAAVVFAHQHPSGISEPSSADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHII+G+ A SF ++ Sbjct: 128 MLTQQLQAALALIDVRVLDHIIVGQGAPFSFAESGLL 164 >gi|91216072|ref|ZP_01253040.1| putative DNA repair protein [Psychroflexus torquis ATCC 700755] gi|91185589|gb|EAS71964.1| putative DNA repair protein [Psychroflexus torquis ATCC 700755] Length = 232 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I S+G I V R + + L +T++ILVHNHPSG PS AD Sbjct: 136 LMLNNSNKIIYKYPLSKGGITSTMVDTRLVYKSALAHGSTALILVHNHPSGTLQPSQADK 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + L+I + DHII+ + + SF I+ Sbjct: 196 TITQKLKNAGDLLDIKILDHIIVTEKTYFSFADEGIL 232 >gi|85707304|ref|ZP_01038388.1| DNA repair protein RadC [Roseovarius sp. 217] gi|85668185|gb|EAQ23062.1| DNA repair protein RadC [Roseovarius sp. 217] Length = 146 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 48/97 (49%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N +IADE+ S GT+DHVPVY RE+++R L L+A+++IL+HNHPSG+P PS+AD+ Sbjct: 50 LYLDRKNRIIADELLSTGTVDHVPVYPREVIKRALMLNASALILIHNHPSGDPTPSEADL 109 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ I L + +HDHII+G +S + L + Sbjct: 110 SMTKEIQKGCKYLGLTLHDHIIVGAGTELSLRALGKL 146 >gi|332171766|gb|AEE21020.1| DNA repair protein RadC [Glaciecola agarilytica 4H-3-7+YE-5] Length = 224 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI GTID VY R +V++ LE +A ++IL HNHPSG PS AD Sbjct: 128 LLLDSQHQLIKFRKMFFGTIDSASVYPRVLVKQALEDNAAAVILTHNHPSGVAEPSQADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T II+ + L+I V DH+++G VSF +I Sbjct: 188 HITARIISAMGLLDIKVLDHLVVGDGVAVSFAERGLI 224 >gi|313899428|ref|ZP_07832938.1| DNA repair protein RadC [Clostridium sp. HGF2] gi|312955716|gb|EFR37374.1| DNA repair protein RadC [Clostridium sp. HGF2] Length = 229 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ N LI+ V GT+ + V+ REI + ++L I+ VHNHPSG+P PS ADI Sbjct: 128 LFLNQKNQLISSRVMFVGTLTNASVHPREIFREAMQLGCAKILCVHNHPSGDPQPSSADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T++I I + DHII+ ++ + SF ++ Sbjct: 188 SLTRSIEECGVMTAIPLMDHIIVSRNTYFSFAQKGLL 224 >gi|256544878|ref|ZP_05472249.1| DNA repair protein RadC [Anaerococcus vaginalis ATCC 51170] gi|256399377|gb|EEU12983.1| DNA repair protein RadC [Anaerococcus vaginalis ATCC 51170] Length = 226 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N++I+ E+ S G ++ V RE ++ SA S+I VHNHPSGNPNPS D Sbjct: 130 ILLDTKNVIISKELISTGDLNSSIVNPRECFISAVKKSANSVIFVHNHPSGNPNPSCNDK 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L+I V DHIIIG + + SF+ II Sbjct: 190 EITQRLVQAGEILDIKVLDHIIIGNNKYFSFRQENII 226 >gi|153811312|ref|ZP_01963980.1| hypothetical protein RUMOBE_01704 [Ruminococcus obeum ATCC 29174] gi|149832439|gb|EDM87523.1| hypothetical protein RUMOBE_01704 [Ruminococcus obeum ATCC 29174] Length = 236 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N L+ D + S+GT++ + RE+ L A ++IL+HNHP GNP PS D Sbjct: 135 MMLDNQNHLLGDTMLSKGTVNATLITPREVYLEALRYHAVNLILIHNHPGGNPAPSKCDK 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L I + DHIIIG ++SF+ ++ Sbjct: 195 EITERICQAGEMLGINLLDHIIIGDHRYISFREEGLM 231 >gi|317494142|ref|ZP_07952558.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917915|gb|EFV39258.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA] Length = 159 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI E +GTI H V+ RE+V+ L+ +A ++I+ H HPS + PS +D Sbjct: 63 LLLDNQHRLITHETLFKGTISHTEVHPREVVKTTLKYNAAAVIVAHCHPSCHAEPSQSDR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+ + + + DH++IG VSF + Sbjct: 123 RVTERLRNALDLVGVRLLDHLVIGGMDIVSFAERGWL 159 >gi|77917683|ref|YP_355498.1| DNA repair protein RadC [Pelobacter carbinolicus DSM 2380] gi|123575192|sp|Q3A8G4|Y065_PELCD RecName: Full=UPF0758 protein Pcar_0065 gi|77543766|gb|ABA87328.1| DNA replication and repair protein RadC [Pelobacter carbinolicus DSM 2380] Length = 227 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N L+ + S G++ V+ R++ + SA +++ VHNHPSG+P+PS D+ Sbjct: 131 LLLDSKNRLLREVGISEGSLTASIVHPRDVFAPVVRESAAAVLFVHNHPSGDPSPSREDL 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ + + + V DHIIIG + +VS ++ Sbjct: 191 DITQRLREVGELMGVRVLDHIIIGDEGYVSLADRGVL 227 >gi|109896377|ref|YP_659632.1| DNA repair protein RadC [Pseudoalteromonas atlantica T6c] gi|123361460|sp|Q15ZW0|Y046_PSEA6 RecName: Full=UPF0758 protein Patl_0046 gi|109698658|gb|ABG38578.1| DNA repair protein RadC [Pseudoalteromonas atlantica T6c] Length = 224 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI GTID VY R +V++ LE +A ++IL HNHPSG PS AD Sbjct: 128 LLLDSQHQLIKFRKMFFGTIDSASVYPRVLVKQALEDNAAAVILTHNHPSGVAEPSQADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T II+ ++ L+I V DH+++G VSF +I Sbjct: 188 HITARIISAMSLLDIKVLDHLVVGDGVAVSFAERGLI 224 >gi|145628112|ref|ZP_01783913.1| DNA repair protein RadC [Haemophilus influenzae 22.1-21] gi|144979887|gb|EDJ89546.1| DNA repair protein RadC [Haemophilus influenzae 22.1-21] Length = 99 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E GTI+ VY REI++ L +A ++IL HNHPSG PS +D Sbjct: 3 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 62 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + + I V DH+I+GK SF ++ Sbjct: 63 LITKKIQESAELMEIRVLDHLIVGKTDCYSFAENFLL 99 >gi|218888170|ref|YP_002437491.1| DNA repair protein RadC [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759124|gb|ACL10023.1| DNA repair protein RadC [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 225 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 42/96 (43%), Positives = 58/96 (60%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD N L+A E SRGT++ VY REI++ L A SIILVHNHP GNP+PS DI Sbjct: 130 LLDTQNRLVAWERASRGTVNASVVYPREILELALRHKAASIILVHNHPGGNPSPSAGDIE 189 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + + + DH+I+ DA S K +I Sbjct: 190 ITRQLELSAKAIGMRLLDHVIVTDDACYSLKDDGLI 225 >gi|42665|emb|CAA44966.1| radC [Escherichia coli K-12] gi|42667|emb|CAA44967.1| radC [Escherichia coli K-12] gi|383570|prf||1903291A radC gene gi|444279|prf||1906333A radC gene Length = 99 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I GT++HV V+ REI++ ++++A+++IL HNHPSG PS AD Sbjct: 3 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 62 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + +++ V DHI+IG+ +VSF I Sbjct: 63 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 99 >gi|237736412|ref|ZP_04566893.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] gi|229421454|gb|EEO36501.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817] Length = 154 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N LIA++ GTID VY R +++ L ++ +IL HNHPSGN PS DI Sbjct: 58 LFLNNANKLIAEKTLFYGTIDKSAVYPRVVLEEVLRYNSAGVILAHNHPSGNLRPSKQDI 117 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +N++V DH+IIG D + SF+ +I Sbjct: 118 QLTEALQELLEKINVMVLDHMIIGDDEYFSFREEGLI 154 >gi|289578046|ref|YP_003476673.1| DNA repair protein RadC [Thermoanaerobacter italicus Ab9] gi|297544317|ref|YP_003676619.1| DNA repair protein RadC [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289527759|gb|ADD02111.1| DNA repair protein RadC [Thermoanaerobacter italicus Ab9] gi|296842092|gb|ADH60608.1| DNA repair protein RadC [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 226 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 58/96 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +IA E S G+++ V+ RE+ + +E S +SIILVHNHPSG+P PS DI Sbjct: 127 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSCSSIILVHNHPSGDPTPSREDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ ++ N L I V DH+IIG +S K Sbjct: 187 EVTKRLVEGGNILGIKVLDHVIIGDGRGISLKEKGY 222 >gi|254522631|ref|ZP_05134686.1| DNA repair protein RadC [Stenotrophomonas sp. SKA14] gi|313107555|ref|ZP_07793740.1| hypothetical protein PA39016_001030004 [Pseudomonas aeruginosa 39016] gi|219720222|gb|EED38747.1| DNA repair protein RadC [Stenotrophomonas sp. SKA14] gi|310880242|gb|EFQ38836.1| hypothetical protein PA39016_001030004 [Pseudomonas aeruginosa 39016] Length = 164 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E RGTI+ VY R +VQR LEL A +++ H HPSG PS AD Sbjct: 68 VFLDSMHQVLAYEPLFRGTINSTSVYPRVVVQRVLELKAAAVVFAHQHPSGISEPSSADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHII+G+ A SF ++ Sbjct: 128 MLTQQLQAALALIDVRVLDHIIVGQGAPFSFAESGLL 164 >gi|16800652|ref|NP_470920.1| DNA repair protein RadC [Listeria innocua Clip11262] gi|25009035|sp|Q92BG5|Y1584_LISIN RecName: Full=UPF0758 protein lin1584 gi|16414071|emb|CAC96815.1| lin1584 [Listeria innocua Clip11262] gi|313618770|gb|EFR90672.1| putative DNA repair protein [Listeria innocua FSL S4-378] Length = 224 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N +I + G ++ V+ RE+ + L S+ SI+ HNHPSG+P PS D+ Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSSASIMCFHNHPSGDPAPSSEDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + N + I + DHIIIGK+ ++S K Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223 >gi|83956247|ref|ZP_00964688.1| DNA repair protein [Sulfitobacter sp. NAS-14.1] gi|83839468|gb|EAP78649.1| DNA repair protein [Sulfitobacter sp. NAS-14.1] Length = 146 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 49/97 (50%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N +IADE+ S GT+DHVPVY RE+++R L L+A+++IL+HNHPSG+P PS+AD+ Sbjct: 50 LYLDRKNRIIADELLSTGTVDHVPVYPREVIKRALMLNASALILIHNHPSGDPTPSEADL 109 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ I L + +HDHII+G +S +GL + Sbjct: 110 SMTKEIQKGCKYLGLTLHDHIIVGAGTELSLRGLGKL 146 >gi|300703309|ref|YP_003744911.1| DNA repair protein RadC fork [Ralstonia solanacearum CFBP2957] gi|299070972|emb|CBJ42281.1| DNA repair protein radC homolog, associated with replication fork [Ralstonia solanacearum CFBP2957] Length = 224 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 60/95 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E +GT+ VY REI +R L +A+++IL HNHP+G+ PS++D+ Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALYHNASAVILSHNHPTGHVEPSESDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + L+ L++ V DH+I+G+ SF Sbjct: 188 ILTRELCRALSLLDVRVLDHMIVGRAEVYSFLEHG 222 >gi|254495321|ref|ZP_05108245.1| DNA repair protein RadC [Polaribacter sp. MED152] gi|85819675|gb|EAQ40832.1| DNA repair protein RadC [Polaribacter sp. MED152] Length = 228 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N ++A S+G + V IR + +R +EL++ +I+ HNHPSG PS AD Sbjct: 132 LFLNNSNKVLAKTQISKGGLTATVVDIRLLFKRAIELASVGMIVCHNHPSGKLEPSQADK 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L+I + DH+II + + SF I+ Sbjct: 192 QLTEKIKRAGTTLDIKLLDHLIITEKWYFSFADEGIL 228 >gi|126464466|ref|YP_001045579.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17029] gi|126106277|gb|ABN78807.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17029] Length = 138 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 51/97 (52%), Positives = 70/97 (72%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N++IADE S GT+ HVPVY RE+ +R LEL+A+++IL+HNHPSG+P PS DI Sbjct: 42 LFLDSKNVVIADEALSSGTVAHVPVYPREVAKRALELNASAVILIHNHPSGDPTPSTEDI 101 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I + + + VHDHI+IG++A VSF+ + Sbjct: 102 EMTFQIASACEAIEVRVHDHIVIGREAEVSFRASGFM 138 >gi|313884927|ref|ZP_07818679.1| DNA repair protein RadC [Eremococcus coleocola ACS-139-V-Col8] gi|312619618|gb|EFR31055.1| DNA repair protein RadC [Eremococcus coleocola ACS-139-V-Col8] Length = 229 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 51/93 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I + GT++ + REI + ++ IIL HNHPSG+ PS ADI Sbjct: 131 LFLNTKNEIIKKKTIFIGTVNSSVAHPREIFKEAVKYPTARIILGHNHPSGDVAPSTADI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 T+ +I + I + DH+IIG + ++S Sbjct: 191 QFTKRMIECGQLMGIEILDHLIIGHENYLSLHE 223 >gi|241662298|ref|YP_002980658.1| DNA repair protein RadC [Ralstonia pickettii 12D] gi|240864325|gb|ACS61986.1| DNA repair protein RadC [Ralstonia pickettii 12D] Length = 164 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ + ++A E +GT+D VY R +VQR L L+A+++IL H HPSG PS AD Sbjct: 68 VFLNCQHQVLAYEPMFKGTVDQTSVYPRVLVQRALALNASAVILAHQHPSGMTVPSAADQ 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DH+I+GK SF ++ Sbjct: 128 VLTDRLKAALAMVDVRVVDHLIVGKGTPYSFAESGLL 164 >gi|291613221|ref|YP_003523378.1| DNA repair protein RadC [Sideroxydans lithotrophicus ES-1] gi|291583333|gb|ADE10991.1| DNA repair protein RadC [Sideroxydans lithotrophicus ES-1] Length = 224 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F+D + +I E +GT+ VY RE+V+R L +A ++I HNHPSG PS +D Sbjct: 128 IFVDAQHRVICAEELFQGTLTQTSVYPREVVKRALHHNAAALIFAHNHPSGVAEPSQSDQ 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L +++ V DH I+ A +SF ++ Sbjct: 188 LLTDALMQALRLVDVRVLDHFIVAGAACLSFAEKGML 224 >gi|198282668|ref|YP_002218989.1| DNA repair protein RadC [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667466|ref|YP_002424861.1| DNA repair protein RadC [Acidithiobacillus ferrooxidans ATCC 23270] gi|226736615|sp|B7J4A8|Y358_ACIF2 RecName: Full=UPF0758 protein AFE_0358 gi|238689967|sp|B5EMA3|Y528_ACIF5 RecName: Full=UPF0758 protein Lferr_0528 gi|198247189|gb|ACH82782.1| DNA repair protein RadC [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519679|gb|ACK80265.1| DNA repair protein RadC [Acidithiobacillus ferrooxidans ATCC 23270] Length = 224 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 59/95 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++ E GTID V+IRE+++R LEL+A ++I+ HNHPSG PS AD+ Sbjct: 128 IFLDNRHRVLRFEEMFLGTIDGATVHIREVLKRALELNAAALIVAHNHPSGVAEPSAADL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 ++T+ + + L++ + DH I+G +S + Sbjct: 188 SLTRRLDQAMQLLDLRLLDHFIVGDGEPLSLREQG 222 >gi|240850644|ref|YP_002972044.1| DNA repair protein RadC [Bartonella grahamii as4aup] gi|240267767|gb|ACS51355.1| DNA repair protein RadC [Bartonella grahamii as4aup] Length = 264 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 59/97 (60%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N L+ADEVQ GTIDH PVY RE++ R LELSA+ +ILVHNHPSG+ PSDADI Sbjct: 168 LFLDKKNGLLADEVQQTGTIDHTPVYPREVISRALELSASGLILVHNHPSGDSTPSDADI 227 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + N L II+HDH+II ++ SFK L++I Sbjct: 228 TMTYRLKDAANALGIIIHDHLIIARNNHTSFKALKLI 264 >gi|78189473|ref|YP_379811.1| DNA repair protein RadC [Chlorobium chlorochromatii CaD3] gi|123579488|sp|Q3AQF7|Y1513_CHLCH RecName: Full=UPF0758 protein Cag_1513 gi|78171672|gb|ABB28768.1| DNA replication and repair protein RadC [Chlorobium chlorochromatii CaD3] Length = 222 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I +E+ S GT++ ++ REI + + SA SII+VHNHPSG+ NPS+AD Sbjct: 126 LHLNTKNQVIKNELISIGTLNTAVIHPREIFKSAIRESAHSIIVVHNHPSGDVNPSNADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + I + DH+I+ K + SF+ ++ Sbjct: 186 KITNELKQAGAFMQIEMLDHVIMSKTEWYSFRERGLL 222 >gi|163855388|ref|YP_001629686.1| DNA repair protein radC-like protein [Bordetella petrii DSM 12804] gi|163259116|emb|CAP41415.1| DNA repair protein radC homolog [Bordetella petrii] Length = 164 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E RGTI+ VY R +VQR LEL+A +++ H HPSG PS AD Sbjct: 68 VFLDSMHQVLAYEPLFRGTINSTSVYPRVVVQRVLELNAAAVVFAHQHPSGISEPSSADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHII+G+ A SF ++ Sbjct: 128 MLTQQLQAALALIDVRVLDHIIVGQGAPFSFAESGLL 164 >gi|257463623|ref|ZP_05628014.1| DNA repair protein radC [Fusobacterium sp. D12] gi|317061175|ref|ZP_07925660.1| DNA repair protein radC [Fusobacterium sp. D12] gi|313686851|gb|EFS23686.1| DNA repair protein radC [Fusobacterium sp. D12] Length = 227 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N L+ E RG+ID VY REI+++ L+ A S+I HNHPSG PS DI Sbjct: 131 LFLNTANRLLCSEELFRGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGRTQPSRQDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++++ +HII+ K ++ SF ++ Sbjct: 191 ELTREMKEALKLFDVLLLEHIIVSKHSYFSFLEEGLL 227 >gi|50121779|ref|YP_050946.1| hypothetical protein ECA2855 [Pectobacterium atrosepticum SCRI1043] gi|49612305|emb|CAG75755.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 157 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI EV + G I+ V+ REI++ L +A ++IL HNHPSG PS AD Sbjct: 61 LYLDNQHRLIEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGCAEPSQADR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T + +L+ L++ V DH+++G +SF + Sbjct: 121 HITDKLKGSLSQLDVRVLDHLVVGGAEVMSFAERGWL 157 >gi|182679809|ref|YP_001833955.1| DNA repair protein RadC [Beijerinckia indica subsp. indica ATCC 9039] gi|182635692|gb|ACB96466.1| DNA repair protein RadC [Beijerinckia indica subsp. indica ATCC 9039] Length = 241 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 57/97 (58%), Positives = 70/97 (72%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADEVQ GT+DH PVY REI++R LEL A +IILVHNHPSG+P PS D+ Sbjct: 145 LFLDRKNGLIADEVQGIGTVDHAPVYPREIIRRALELGACAIILVHNHPSGDPTPSKEDV 204 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I+ + I VHDH+IIGK S K L++I Sbjct: 205 QITQQIVALGKAMQISVHDHLIIGKQGHASLKSLQLI 241 >gi|319407236|emb|CBI80875.1| DNA repair protein RadC [Bartonella sp. 1-1C] Length = 264 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LI+DEVQ GTIDH PVY RE++ R LELSA+ +IL+HNHPSGN +PS ADI Sbjct: 168 LFLDKRNGLISDEVQQTGTIDHTPVYPREVISRALELSASGLILIHNHPSGNASPSKADI 227 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT + N L I +HDHIII ++ + SFK L++I Sbjct: 228 SMTYRLKDAANALEITIHDHIIIARNNYTSFKELKLI 264 >gi|271501414|ref|YP_003334439.1| DNA repair protein RadC [Dickeya dadantii Ech586] gi|270344969|gb|ACZ77734.1| DNA repair protein RadC [Dickeya dadantii Ech586] Length = 159 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N + E+ GT++H ++ REIV+ L +A ++IL HNHPSG PS++D Sbjct: 63 LYLDNQNRFLDKEILFLGTVNHTEIHPREIVKGALRHNAAAVILAHNHPSGYTAPSESDK 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I L L I V DH IIG +SF ++ Sbjct: 123 AITRKVIQALALLEIRVLDHFIIGTHDVLSFAEHGLM 159 >gi|90962045|ref|YP_535961.1| DNA repair protein [Lactobacillus salivarius UCC118] gi|227891064|ref|ZP_04008869.1| DNA repair protein [Lactobacillus salivarius ATCC 11741] gi|301300891|ref|ZP_07207063.1| DNA repair protein RadC [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821239|gb|ABD99878.1| DNA repair protein [Lactobacillus salivarius UCC118] gi|227867153|gb|EEJ74574.1| DNA repair protein [Lactobacillus salivarius ATCC 11741] gi|300851490|gb|EFK79202.1| DNA repair protein RadC [Lactobacillus salivarius ACS-116-V-Col5a] Length = 225 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N +++++V +GT++ V+ REI + L S I++ HNHPSGN PS+ DI Sbjct: 127 VCLDTKNQVLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSGNVEPSENDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I + I + DH+I+G + ++S +I+ Sbjct: 187 QLTKRLINAGKMIGIELIDHVIVGSEVYLSLAEEKIV 223 >gi|291533850|emb|CBL06963.1| DNA replication and repair protein RadC [Megamonas hypermegale ART12/1] Length = 229 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N +IA S G+++ V+ RE+ + + A+S+ILVHNHPSG+P+PS DI Sbjct: 132 LLLDTKNQIIAFPDISIGSLNASIVHPREVFRCAINHFASSMILVHNHPSGDPSPSMEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ +I L+I + DHII+G + F S K +I Sbjct: 192 HITKKLIAGSKILDIEILDHIIVGDNKFTSLKQQGMI 228 >gi|170728880|ref|YP_001762906.1| DNA repair protein RadC [Shewanella woodyi ATCC 51908] gi|238688685|sp|B1KL05|Y4561_SHEWM RecName: Full=UPF0758 protein Swoo_4561 gi|169814227|gb|ACA88811.1| DNA repair protein RadC [Shewanella woodyi ATCC 51908] Length = 225 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY R++V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPRDVVSLVLEKKAAAVIVCHNHPSGVAEPSHADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+ +++ + DH+++G VSF I Sbjct: 188 RITERLKCALSTIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|330957298|gb|EGH57558.1| hypothetical protein PMA4326_01827 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 224 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + + E+ RGTI+ V+ R++V+R + +A S+IL HNHPSG PS +DI Sbjct: 128 LFLDSKHRAMTFEILFRGTINAAYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ V DH+IIG +S ++ Sbjct: 188 DLTKRLKEALLLVDVQVLDHVIIGDGEPLSMVEKGLM 224 >gi|218891377|ref|YP_002440244.1| RadC family DNA repair protein [Pseudomonas aeruginosa LESB58] gi|218771603|emb|CAW27376.1| RadC family DNA repair protein [Pseudomonas aeruginosa LESB58] Length = 164 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ + ++A E RGTI V+ R IVQR LEL+A ++I H HPSG PS AD Sbjct: 68 VFLNSMHEVLAYEPMFRGTIHSTSVHARPIVQRALELNAAAVIFSHQHPSGCTEPSSADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+ +++ V DH+I+G+ SF ++ Sbjct: 128 ALTQTLRAALSLIDVRVLDHLIVGQGTPYSFAESGLL 164 >gi|330808765|ref|YP_004353227.1| putative DNA repair protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376873|gb|AEA68223.1| putative DNA repair protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 163 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A E GTID V VY R I+QR LE +II+ HNHPSG+ PS DI Sbjct: 67 LFLDARHRVVAYEPLFYGTIDVVNVYPRRILQRALEHQCAAIIVAHNHPSGDTIPSPGDI 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L LN+ + DH IIG+ SF +I Sbjct: 127 QITKTLSDVLPKLNVRLLDHFIIGEGEPYSFAESGLI 163 >gi|315576278|gb|EFU88469.1| DNA repair protein RadC [Enterococcus faecalis TX0309B] Length = 240 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP PS DI Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSDRILLAHNHPSGNPTPSPQDI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ + + I + DHII+G ++S + Sbjct: 201 QFTKRMEECGEMMGIQLLDHIILGDSGYISLREENF 236 >gi|300214742|gb|ADJ79158.1| DNA repair protein [Lactobacillus salivarius CECT 5713] Length = 225 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N +++++V +GT++ V+ REI + L S I++ HNHPSGN PS+ DI Sbjct: 127 VCLDTKNQVLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSGNVEPSENDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I + I + DH+I+G + ++S +I+ Sbjct: 187 QLTKRLINAGKMIGIELIDHVIVGSEVYLSLAEEKIV 223 >gi|294508375|ref|YP_003572433.1| DNA repair protein RadC [Salinibacter ruber M8] gi|294344703|emb|CBH25481.1| DNA repair protein RadC [Salinibacter ruber M8] Length = 258 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N++I D S G + V R + ++ + A ++I +HNHPSGNP PS DI Sbjct: 161 VHLNTANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGNPEPSREDI 220 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I VHDH+II S +I Sbjct: 221 RITRQLAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 257 >gi|289524079|ref|ZP_06440933.1| DNA repair protein RadC [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502735|gb|EFD23899.1| DNA repair protein RadC [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 309 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 2/99 (2%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N I + SRG+++ V +EIV+ SA+S+ILVHNHPSG PS D+ Sbjct: 209 ILLDIKNKPIGNVEISRGSVNTTVVDPKEIVKVASLKSASSVILVHNHPSGETTPSSEDV 268 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK--DAFVSFKGLRII 97 +T I + + + V DHII+GK + SF +I Sbjct: 269 ELTSRITYACDLVGVNVLDHIIVGKNPGDYYSFAREGLI 307 >gi|217978231|ref|YP_002362378.1| DNA repair protein RadC [Methylocella silvestris BL2] gi|217503607|gb|ACK51016.1| DNA repair protein RadC [Methylocella silvestris BL2] Length = 238 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 60/97 (61%), Positives = 71/97 (73%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY REI++R LELSA ++ILVHNHPSG+P PS DI Sbjct: 142 LFLDKKNFLIADEVQGVGTVDHAPVYPREIMRRALELSACALILVHNHPSGDPEPSTEDI 201 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T II PL I VHDH++IGK S K +R+I Sbjct: 202 YLTHQIIAVGKPLKITVHDHLVIGKHGHASLKEMRLI 238 >gi|157373526|ref|YP_001472126.1| DNA repair protein RadC [Shewanella sediminis HAW-EB3] gi|189029405|sp|A8FQ75|Y385_SHESH RecName: Full=UPF0758 protein Ssed_0385 gi|157315900|gb|ABV34998.1| DNA repair protein RadC [Shewanella sediminis HAW-EB3] Length = 225 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY R++V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPRDVVCLVLEKKAAAVIVCHNHPSGVAEPSLADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKFALETIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|114330110|ref|YP_746332.1| DNA repair protein RadC [Nitrosomonas eutropha C91] gi|114307124|gb|ABI58367.1| DNA repair protein RadC [Nitrosomonas eutropha C91] Length = 167 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ + ++A E +GT+ VY R +VQR LEL+A+++I H HPSG PS AD Sbjct: 70 VFLNSQHQVLACECLFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADR 129 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L+ ++I V DH IIGK SF ++ Sbjct: 130 AITNRLKFILSMIDIRVVDHFIIGKGEPYSFAESGLL 166 >gi|163857461|ref|YP_001631759.1| DNA repair protein RadC [Bordetella petrii DSM 12804] gi|229485545|sp|A9IU27|Y3149_BORPD RecName: Full=UPF0758 protein Bpet3149 gi|163261189|emb|CAP43491.1| DNA repair protein radC homolog [Bordetella petrii] Length = 225 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD LI +RGT+ VY RE+V+ L A ++IL HNHPSG+ PS AD Sbjct: 129 LYLDSQLNLITSGELARGTLARASVYPREVVREALRHHAAALILAHNHPSGSAQPSQADR 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + T+++ L + I + DH+I+ D VS L ++ Sbjct: 189 DFTRHMQQALALVEIRLLDHLIVAGDTVVSMAELGLL 225 >gi|299535631|ref|ZP_07048952.1| DNA repair protein radC-like protein [Lysinibacillus fusiformis ZC1] gi|298728831|gb|EFI69385.1| DNA repair protein radC-like protein [Lysinibacillus fusiformis ZC1] Length = 224 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I + G+++ V+ REI + ++ SA SII HNHPSG P PS DI Sbjct: 128 LFLNIKNQIIHKQTIFIGSLNASIVHPREIFREAVKRSAASIICAHNHPSGVPTPSSEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ I+ + I + DH+IIG ++S K Sbjct: 188 EVTKRIVEAGYIIGIELIDHVIIGDHQYISLKEKGY 223 >gi|257469304|ref|ZP_05633398.1| DNA repair protein radC [Fusobacterium ulcerans ATCC 49185] gi|317063551|ref|ZP_07928036.1| DNA repair protein radC [Fusobacterium ulcerans ATCC 49185] gi|313689227|gb|EFS26062.1| DNA repair protein radC [Fusobacterium ulcerans ATCC 49185] Length = 229 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N LIA E GTID VY REIV+R + A S++ HNHPSGN +PS DI Sbjct: 131 LFLNSANNLIASETLFYGTIDKSAVYPREIVERTIRNGAKSVVFAHNHPSGNISPSKQDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ++ +L L+I + DHIII K+++ SF +I Sbjct: 191 ELTQHMYDSLKTLDIRLIDHIIITKNSYFSFLEEGLI 227 >gi|160880508|ref|YP_001559476.1| DNA repair protein RadC [Clostridium phytofermentans ISDg] gi|160429174|gb|ABX42737.1| DNA repair protein RadC [Clostridium phytofermentans ISDg] Length = 232 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L D + L+ +E+ S GT++ + RE+ ++ A IIL+HNHPSG+P PS DI Sbjct: 135 LMFDTKSKLLREEIISIGTVNASIMSPREVFLLAVKYEAVYIILLHNHPSGDPTPSKEDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L + + DHIIIG + ++S K II Sbjct: 195 AVTKRMKEAGELLGVTLMDHIIIGDNRYISLKEQGII 231 >gi|329851338|ref|ZP_08266095.1| DNA repair protein RadC family protein [Asticcacaulis biprosthecum C19] gi|328840184|gb|EGF89756.1| DNA repair protein RadC family protein [Asticcacaulis biprosthecum C19] Length = 243 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 53/97 (54%), Positives = 71/97 (73%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK LIADE+ GT+DH P Y REI++R LELSA+S+ILVHNHPSG+P+ S DI Sbjct: 147 LFLDKKYQLIADEIMGYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPSASPGDI 206 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ I+ PL I VHDH+I+G++ +S R++ Sbjct: 207 DMTRQIVKAGEPLRIKVHDHLIVGREGVLSMSQQRLM 243 >gi|163868311|ref|YP_001609520.1| DNA repair protein RadC [Bartonella tribocorum CIP 105476] gi|161017967|emb|CAK01525.1| DNA repair protein RadC [Bartonella tribocorum CIP 105476] Length = 270 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 70/97 (72%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N L+ADEVQ GTIDH PVY RE++ R LELSA+ +ILVHNHPSG+ PSDADI Sbjct: 174 LFLDKKNGLLADEVQQTGTIDHTPVYPREVISRALELSASGLILVHNHPSGDSTPSDADI 233 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + N L I +HDH+II + SFK L++I Sbjct: 234 TMTYRLKDAANALGITIHDHLIIARHNHTSFKALKLI 270 >gi|296157078|ref|ZP_06839914.1| DNA repair protein RadC [Burkholderia sp. Ch1-1] gi|295892414|gb|EFG72196.1| DNA repair protein RadC [Burkholderia sp. Ch1-1] Length = 164 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F+D + +IA E GTID VY R +VQR L +A ++IL H HPSG PS AD Sbjct: 68 IFMDSQHQVIAYEPLFHGTIDAAVVYPRVLVQRALAHNAAALILAHQHPSGVAKPSAADK 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++I L +++ V DHII+GK SF ++ Sbjct: 128 AITRDIKAALAMVDVRVLDHIIVGKGTPYSFSEAGLL 164 >gi|213161115|ref|ZP_03346825.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428441|ref|ZP_03361191.1| DNA repair protein RadC [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 159 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI + GT++ V V+ RE+V+ L+ +A +++L HNHPSG PS AD Sbjct: 63 LWLDNQHRLIVHDTLFLGTVNAVTVHPREVVKSGLKNNAAAVVLAHNHPSGEAEPSKADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH+IIG SF + Sbjct: 123 LITERLQQALELVDIRLLDHLIIGGMDIASFAERGWL 159 >gi|310778318|ref|YP_003966651.1| DNA repair protein RadC [Ilyobacter polytropus DSM 2926] gi|309747641|gb|ADO82303.1| DNA repair protein RadC [Ilyobacter polytropus DSM 2926] Length = 225 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N L+ +E +GTID VY R IV++ L+ A S+I HNHPSGN NPS ADI Sbjct: 129 IFLDTANNLLCEETLFKGTIDRSGVYPRNIVEKVLKHGAKSVIFAHNHPSGNLNPSKADI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + T I LN + I V DH+II +D++ SF +I Sbjct: 189 DFTDKITKVLNAIEIRVLDHMIITRDSYFSFLEKGLI 225 >gi|145301518|ref|YP_001144357.1| DNA repair protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142856400|gb|ABO92609.1| DNA repair protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 296 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + +I S GTID VY RE+V+ L+ +A ++IL HNHPSG PS AD Sbjct: 67 ILLDNQHRVINAVDLSHGTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + L+ ++I V DHI++ + +SF Sbjct: 127 QITERLQAALDLVDIRVLDHIVVAGENSMSFAVRGF 162 >gi|238855285|ref|ZP_04645604.1| DNA repair protein RadC [Lactobacillus jensenii 269-3] gi|260664643|ref|ZP_05865495.1| DNA repair protein RadC [Lactobacillus jensenii SJ-7A-US] gi|282932422|ref|ZP_06337847.1| RadC-like protein [Lactobacillus jensenii 208-1] gi|313471902|ref|ZP_07812394.1| DNA repair protein RadC [Lactobacillus jensenii 1153] gi|238832177|gb|EEQ24495.1| DNA repair protein RadC [Lactobacillus jensenii 269-3] gi|239529177|gb|EEQ68178.1| DNA repair protein RadC [Lactobacillus jensenii 1153] gi|260561708|gb|EEX27680.1| DNA repair protein RadC [Lactobacillus jensenii SJ-7A-US] gi|281303371|gb|EFA95548.1| RadC-like protein [Lactobacillus jensenii 208-1] Length = 207 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N ++ + + +GT++ V+ R+I + + ++ I++ HNHPSG+ +PS DI Sbjct: 111 IYLDNKNKVLGERLLFQGTVNRSVVHPRDIFRWAVFYNSVGILIAHNHPSGDTSPSQKDI 170 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I + + I DHII+ +++SFK ++I Sbjct: 171 EFTKQIDKASDLMGINFLDHIIVADRSYLSFKEEQLI 207 >gi|149912934|ref|ZP_01901468.1| DNA repair protein RadC [Roseobacter sp. AzwK-3b] gi|149813340|gb|EDM73166.1| DNA repair protein RadC [Roseobacter sp. AzwK-3b] Length = 254 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 53/96 (55%), Positives = 73/96 (76%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD+ NILIADE Q+ GT+DHVPVY RE+V+R L L+A+++ILVHNHPSG+P PS++DI+ Sbjct: 159 YLDRKNILIADEAQANGTVDHVPVYPREVVKRALHLNASALILVHNHPSGDPTPSESDIH 218 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I T L + +HDH+IIGK +SF+ + Sbjct: 219 MTHQIQTAAQALGLTLHDHLIIGKSCEISFRAQGYL 254 >gi|104784328|ref|YP_610826.1| DNA repair protein RadC [Pseudomonas entomophila L48] gi|122401255|sp|Q1I2U3|Y5431_PSEE4 RecName: Full=UPF0758 protein PSEEN5431 gi|95113315|emb|CAK18043.1| DNA repair protein radC [Pseudomonas entomophila L48] Length = 226 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +A E+ RGTID +Y RE+V+R L +A ++IL HNHPSGN PS D+ Sbjct: 128 LFLDTKHRPLAFEILFRGTIDRASIYPREVVRRALLHNAAALILCHNHPSGNCEPSQDDV 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T + +L +++ V DH+I+G +S + Sbjct: 188 HLTLMLKRSLALIDVRVVDHVIVGDGEPLSMIEHGWL 224 >gi|323136973|ref|ZP_08072053.1| DNA repair protein RadC [Methylocystis sp. ATCC 49242] gi|322397734|gb|EFY00256.1| DNA repair protein RadC [Methylocystis sp. ATCC 49242] Length = 244 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 60/97 (61%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GTIDH PVY RE+V+R LEL A+++IL HNHPSG+P PS ADI Sbjct: 148 LFLDKRNALIADEVQGVGTIDHTPVYPREVVRRALELGASALILAHNHPSGDPTPSAADI 207 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT++II P I VHDH+I+G++ SF+GL++I Sbjct: 208 RMTKDIIAIAQPFGIAVHDHLIVGRNGQASFRGLKLI 244 >gi|223984388|ref|ZP_03634527.1| hypothetical protein HOLDEFILI_01821 [Holdemania filiformis DSM 12042] gi|223963630|gb|EEF68003.1| hypothetical protein HOLDEFILI_01821 [Holdemania filiformis DSM 12042] Length = 228 Score = 124 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N ++ + +GT+D V+ RE+ + L SA +++VHNHPS + PS AD Sbjct: 131 IYLDAKNHILEHRLLFKGTLDASIVHPREVFKEALLASACRVLVVHNHPSQDLTPSLADR 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + T + I + DH+I+G + SF+ ++ Sbjct: 191 IITQRLKETGELIGIELLDHLIVGTTQYFSFRAHGLL 227 >gi|198275573|ref|ZP_03208104.1| hypothetical protein BACPLE_01738 [Bacteroides plebeius DSM 17135] gi|198271202|gb|EDY95472.1| hypothetical protein BACPLE_01738 [Bacteroides plebeius DSM 17135] Length = 158 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ N ++ + S G + +R I Q L ++ ++IL HNHPSGN PS DI Sbjct: 62 LFLNQANQVLGYTLISEGGLTETTADVRLIFQAALLTNSVALILAHNHPSGNLKPSPEDI 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I V DHII+ + SF ++ Sbjct: 122 RLTKQVRDAAQLMRIKVLDHIILTDAEYYSFADEGML 158 >gi|170293827|gb|ACB12963.1| RadC [Aquabacterium sp. PL1F5] Length = 198 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD +LI E RGT+ VY RE+V+ L +A +++L HNHPSG +PS AD Sbjct: 102 LYLDAQQVLIEAEELFRGTLTQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADE 161 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + ++L +++ V DH I+G D +SF ++ Sbjct: 162 LLTQTLKSSLMMVDVRVLDHFIVGGDRVLSFAEQGLL 198 >gi|221064731|ref|ZP_03540836.1| DNA repair protein RadC [Comamonas testosteroni KF-1] gi|319764685|ref|YP_004128622.1| DNA repair protein radc [Alicycliphilus denitrificans BC] gi|220709754|gb|EED65122.1| DNA repair protein RadC [Comamonas testosteroni KF-1] gi|317119246|gb|ADV01735.1| DNA repair protein RadC [Alicycliphilus denitrificans BC] Length = 164 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E RGTI+ VY R +VQR LEL+A +++ H HPSG PS AD Sbjct: 68 VFLDSLHQVLAYEPLFRGTINATSVYPRVVVQRVLELNAAAVVFAHQHPSGVSEPSSADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHII+G+ A SF ++ Sbjct: 128 MLTQQLQAALALIDVRVLDHIIVGQGAPFSFAESGLL 164 >gi|91784617|ref|YP_559823.1| DNA repair protein RadC [Burkholderia xenovorans LB400] gi|40019185|emb|CAE92909.1| putative DNA repair protein [Pseudomonas putida] gi|91688571|gb|ABE31771.1| DNA repair protein RadC [Burkholderia xenovorans LB400] Length = 164 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E RGTI+ VY R +VQR LEL A +++ H HPSG+ PS+AD Sbjct: 68 VFLDSMHQVLAYEPLFRGTINSTAVYPRVVVQRVLELKAAAVVFAHQHPSGSTEPSNADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ + DHI++G SF ++ Sbjct: 128 ALTQRLQAALALIDVRLLDHIVVGLGNPYSFAEHGLL 164 >gi|254441970|ref|ZP_05055456.1| DNA repair protein RadC [Octadecabacter antarcticus 307] gi|198250592|gb|EDY74914.1| DNA repair protein RadC [Octadecabacter antarcticus 307] Length = 189 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+LIADE Q GT+DHVPVY RE+V+R LEL+A+S+ILVHNHPSG+P PS+ DI Sbjct: 93 LFLDRKNVLIADEAQGNGTVDHVPVYPREVVKRALELNASSLILVHNHPSGDPTPSNEDI 152 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I LNI +HDH+IIG+ +SFK +I Sbjct: 153 AMTMQIHDAAKALNISLHDHLIIGRSRELSFKSQGLI 189 >gi|121593658|ref|YP_985554.1| DNA repair protein RadC [Acidovorax sp. JS42] gi|121593791|ref|YP_985687.1| DNA repair protein RadC [Acidovorax sp. JS42] gi|120605738|gb|ABM41478.1| DNA repair protein RadC [Acidovorax sp. JS42] gi|120605871|gb|ABM41611.1| DNA repair protein RadC [Acidovorax sp. JS42] Length = 164 Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E RGTI+ VY R +VQR LEL+A +++ H HPSG PS AD Sbjct: 68 VFLDSMHQVLAYEPLFRGTINSTSVYPRVVVQRVLELNAAAVVFAHQHPSGITEPSSADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHIIIG+ A SF ++ Sbjct: 128 MLTQQLQAALALIDVRVLDHIIIGQGAPFSFAESGLL 164 >gi|241764305|ref|ZP_04762334.1| DNA repair protein RadC [Acidovorax delafieldii 2AN] gi|241366319|gb|EER60856.1| DNA repair protein RadC [Acidovorax delafieldii 2AN] Length = 164 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E RGTI+ VY R +VQR LEL A +++ H HPSG PS AD Sbjct: 68 VFLDSMHQVLAYEPLFRGTINSTAVYPRVVVQRVLELKAAAVVFAHQHPSGITEPSSADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHII+G SF ++ Sbjct: 128 ALTQQLQAALALIDVRVLDHIIVGLGNPYSFAEHGLL 164 >gi|207721439|ref|YP_002251880.1| DNA repair protein RadC [Ralstonia solanacearum MolK2] gi|207742580|ref|YP_002258972.1| dna repair protein radc homolog [Ralstonia solanacearum IPO1609] gi|206586599|emb|CAQ17186.1| dna repair protein radc homolog [Ralstonia solanacearum MolK2] gi|206593974|emb|CAQ60901.1| dna repair protein radc homolog [Ralstonia solanacearum IPO1609] Length = 224 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 60/95 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E +GT+ VY REI +R L +A+++IL HNHP+G+ PS++D+ Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALYHNASALILSHNHPTGHVEPSESDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + L+ L++ V DH+I+G+ SF Sbjct: 188 ILTRELCRALSLLDVRVLDHMIVGRAEVYSFLEHG 222 >gi|330827407|ref|YP_004390645.1| DNA repair protein RadC [Alicycliphilus denitrificans K601] gi|329312715|gb|AEB87129.1| DNA repair protein RadC [Alicycliphilus denitrificans K601] Length = 164 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N +I RGT+ VY RE+V+ L L+A ++I HNHPSG P PS AD Sbjct: 68 IFLDAQNRVIEYIELFRGTLTQTSVYPREVVKTSLRLNAAAVIFAHNHPSGVPEPSRADE 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ + L +++ V DH+++ A VSF ++ Sbjct: 128 NLTKVLKDALALVDVRVLDHVVVAGGASVSFAQRGLL 164 >gi|301644226|ref|ZP_07244233.1| DNA repair protein RadC family protein [Escherichia coli MS 146-1] gi|301077423|gb|EFK92229.1| DNA repair protein RadC family protein [Escherichia coli MS 146-1] Length = 161 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+ E G++ HV V+ RE+V+ L +A +++L HNHPSG+P PS D Sbjct: 65 LYLDNQHRLLESETLFAGSVYHVQVHPREVVKSALRFNAAAVVLAHNHPSGDPEPSKVDR 124 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + L +++ DH+++G+D VSF I Sbjct: 125 QMTDKLKEVLGLVDVKTLDHLVVGQDGIVSFAERGWI 161 >gi|110598384|ref|ZP_01386657.1| DNA repair protein RadC [Chlorobium ferrooxidans DSM 13031] gi|110339993|gb|EAT58495.1| DNA repair protein RadC [Chlorobium ferrooxidans DSM 13031] Length = 223 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I E+ S GT++ ++ RE+ + + SA +II+VHNHPSG+ PS+AD Sbjct: 126 LHLNTKNQIIKSELVSVGTLNASLIHPREVFKAAIRESAHAIIVVHNHPSGDVEPSNADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + I + DHIIIG + SF+ ++ Sbjct: 186 QVTALLKEASALIQIDLLDHIIIGNTGWFSFRENSLL 222 >gi|320160805|ref|YP_004174029.1| DNA repair protein RadC [Anaerolinea thermophila UNI-1] gi|319994658|dbj|BAJ63429.1| DNA repair protein RadC [Anaerolinea thermophila UNI-1] Length = 235 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 60/96 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N ++ E G+++ V + EI + ++ SA S+ILVHNHPSG+P+PS DI Sbjct: 137 ILLDTRNRVLKIENLYIGSLNASTVRVAEIFRPAIQASAASLILVHNHPSGDPSPSPEDI 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ +I L+I V DH+IIG++ +VS K + Sbjct: 197 TLTRTVIQAGKMLDIGVLDHLIIGQNRWVSLKERGL 232 >gi|315500042|ref|YP_004088845.1| DNA repair protein radc [Asticcacaulis excentricus CB 48] gi|315418054|gb|ADU14694.1| DNA repair protein RadC [Asticcacaulis excentricus CB 48] Length = 244 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADE+ + GT+DH P Y REI++R LELSA+S+ILVHNHPSG+P PS DI Sbjct: 148 LFLDKKNQLIADEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDI 207 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ I PL I +HDH+I+G++ +S K + I Sbjct: 208 DMTKANIAAGKPLKIAIHDHLIVGREGVLSMKQVGAI 244 >gi|332040187|gb|EGI76568.1| hypothetical protein HGR_10625 [Hylemonella gracilis ATCC 19624] Length = 223 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + L+A E RGT+ VY RE+V R L A +++L HNHPSG+ +PS AD Sbjct: 127 LMLDSQHRLLALEELFRGTLAQTSVYPREVVLRALHHHAAAVVLAHNHPSGSVSPSRADE 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ + L +++ V DH+I+ +S ++ Sbjct: 187 LLTRSLQSALALVDVRVLDHVIVAPGQALSMAERGLL 223 >gi|294142830|ref|YP_003558808.1| DNA repair protein RadC [Shewanella violacea DSS12] gi|293329299|dbj|BAJ04030.1| DNA repair protein RadC [Shewanella violacea DSS12] Length = 225 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY R++V LE A+++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPRDVVCLVLEKKASAVIVCHNHPSGVAEPSLADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKCALATIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|239909102|ref|YP_002955844.1| DNA repair protein RadC [Desulfovibrio magneticus RS-1] gi|239798969|dbj|BAH77958.1| DNA repair protein RadC [Desulfovibrio magneticus RS-1] Length = 228 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 56/94 (59%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D N L+ E S+GT+D VY RE++ L +A+ +ILVHNHP +P PS D+ T Sbjct: 135 DTKNRLVGWERVSKGTVDQAAVYPREVIAMALRYNASGVILVHNHPGADPKPSAEDMAFT 194 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + I+ ++I V DH+++ ++ F SF+ +I Sbjct: 195 RRIVAAAREMDIRVLDHLVVTENRFFSFQAEGMI 228 >gi|163750748|ref|ZP_02157984.1| DNA repair protein RadC [Shewanella benthica KT99] gi|161329592|gb|EDQ00584.1| DNA repair protein RadC [Shewanella benthica KT99] Length = 225 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY R++V LE A ++I+ HNHPSG PS AD Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPRDVVCLVLEKKAAAVIVCHNHPSGVAEPSLADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G VSF I Sbjct: 188 RITERLKCALATIDVSLLDHMVVGDREIVSFAERGWI 224 >gi|166031835|ref|ZP_02234664.1| hypothetical protein DORFOR_01536 [Dorea formicigenerans ATCC 27755] gi|166028288|gb|EDR47045.1| hypothetical protein DORFOR_01536 [Dorea formicigenerans ATCC 27755] Length = 230 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI + S+GT++ + RE+ L+ +A +I++HNHPSG P PS D Sbjct: 134 LMLNSKSKLIGETNISKGTVNASLITPRELFIEALQKNAVFVIILHNHPSGEPTPSREDR 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I + DHIIIG + +VSF+ ++ Sbjct: 194 LITRRIQDAGALIGIELLDHIIIGNNCYVSFREEGML 230 >gi|237809187|ref|YP_002893627.1| DNA repair protein RadC [Tolumonas auensis DSM 9187] gi|237501448|gb|ACQ94041.1| DNA repair protein RadC [Tolumonas auensis DSM 9187] Length = 168 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A E RGTI+ VY R +VQR L +A ++I H HPSGN PS AD Sbjct: 72 LFLDTRHQVLAYEPLFRGTINQTSVYPRVVVQRALAANAAAVIFAHQHPSGNSEPSAADR 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+ ++I V DH IIG+ SF ++ Sbjct: 132 MITRRLRDALDLIDIRVLDHFIIGQGEPYSFAESGLL 168 >gi|189347307|ref|YP_001943836.1| DNA repair protein RadC [Chlorobium limicola DSM 245] gi|189341454|gb|ACD90857.1| DNA repair protein RadC [Chlorobium limicola DSM 245] Length = 222 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I ++ S GT++ ++ RE+ + + SA +IILVHNHPSG+ PS+AD Sbjct: 126 LHLNTKNRVIRHDIVSVGTLNASLIHPREVFKSAIRESAHAIILVHNHPSGDVEPSNADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I + DH+I+GK+ + SF+ ++ Sbjct: 186 QVTEILKKAGAILQIELLDHVIVGKENWFSFREHSLL 222 >gi|87199332|ref|YP_496589.1| DNA repair protein RadC [Novosphingobium aromaticivorans DSM 12444] gi|87135013|gb|ABD25755.1| DNA repair protein RadC [Novosphingobium aromaticivorans DSM 12444] Length = 245 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 67/97 (69%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N+LI D + S GT+D P+Y RE++++ +++ A ++ILVHNHPSG+P PS ADI Sbjct: 149 LYLNSQNMLILDHLVSEGTLDESPIYTREVIRKAMDVGAAAMILVHNHPSGSPKPSRADI 208 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ + + VHDHI+IG++ S K +I Sbjct: 209 QVTQKVMEAARLMGMTVHDHIVIGREGHTSLKAQGLI 245 >gi|86132165|ref|ZP_01050761.1| DNA repair protein RadC [Dokdonia donghaensis MED134] gi|85817499|gb|EAQ38679.1| DNA repair protein RadC [Dokdonia donghaensis MED134] Length = 237 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N ++ E S+G + V +R +++ +ELSA +IL HNHPSG PS AD Sbjct: 141 LFLNNSNKVLRKEQVSKGGLTGTLVDVRMVMKTAIELSAVGMILGHNHPSGTLKPSQADK 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + T L+I V DHII+ + + SF I+ Sbjct: 201 MLTTKLKTAAQSLDIQVLDHIIVTEKQYFSFADDGIL 237 >gi|120599009|ref|YP_963583.1| DNA repair protein RadC [Shewanella sp. W3-18-1] gi|120559102|gb|ABM25029.1| DNA repair protein RadC [Shewanella sp. W3-18-1] Length = 160 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LIA E GTID VY RE+V+ L +A + I HNHPSG P PS AD Sbjct: 64 LLLDSQHRLIAYEELFFGTIDAASVYPREVVKLVLHRNAAAAIFAHNHPSGIPEPSQADK 123 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L +++ DH +IG VSF I Sbjct: 124 RITERLKSALATIDVAALDHFVIGHHEVVSFAERGWI 160 >gi|325290578|ref|YP_004266759.1| DNA replication and repair protein RadC [Syntrophobotulus glycolicus DSM 8271] gi|324965979|gb|ADY56758.1| DNA replication and repair protein RadC [Syntrophobotulus glycolicus DSM 8271] Length = 230 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ +L+ S G+++ V+ RE + ++ ++ S+IL+HNHPSG+P+PS D+ Sbjct: 134 MHLNTKKMLLGISEISIGSLNSSLVHPRECFKEAIKRNSHSLILLHNHPSGDPSPSQEDL 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I V DHIIIG +VS K +I Sbjct: 194 EITRRLDECGRILGISVLDHIIIGDGRYVSLKEQGMI 230 >gi|325840362|ref|ZP_08167009.1| putative DNA repair protein RadC [Turicibacter sp. HGF1] gi|325490347|gb|EGC92674.1| putative DNA repair protein RadC [Turicibacter sp. HGF1] Length = 149 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 48/96 (50%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L+ N V S GT++ V+ RE+ + + +A SI+ HNHPSG+ PS DI Sbjct: 54 CLNTKNEPTNISVVSVGTLNKTIVHPREVFKTAILSNACSIVAFHNHPSGDTKPSQQDIQ 113 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L I + DH+IIG F S K + Sbjct: 114 LTNRLYEAGELLGIKLLDHLIIGDGTFTSLKEKGYL 149 >gi|255292379|dbj|BAH89498.1| DNA repair protein RadC [uncultured bacterium] Length = 146 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 48/97 (49%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N +IADE+ S GT+DHVPVY RE+++R L L+A+++IL+HNHPSG+P PS+AD+ Sbjct: 50 LYLDRKNRIIADELLSTGTVDHVPVYPREVIKRALMLNASALILIHNHPSGDPTPSEADL 109 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ I L + +HDHII+G +S + L + Sbjct: 110 SMTKEIQKGCKYLGLTMHDHIIVGAGTELSLRALGKL 146 >gi|171057386|ref|YP_001789735.1| DNA repair protein RadC [Leptothrix cholodnii SP-6] gi|238689101|sp|B1Y0I9|Y695_LEPCP RecName: Full=UPF0758 protein Lcho_0695 gi|170774831|gb|ACB32970.1| DNA repair protein RadC [Leptothrix cholodnii SP-6] Length = 222 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 63/97 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E RGT+ VY RE+++R L L+A ++IL HNHPSG PS AD Sbjct: 126 LFLDAQHRLIAYEPLFRGTLTQTSVYPREVLKRALALNAAALILAHNHPSGVAEPSRADE 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ++ T L +++ V DH ++G+++ VSF ++ Sbjct: 186 FLTQSLKTALALIDVRVLDHFVVGRESVVSFAERGLL 222 >gi|307243140|ref|ZP_07525314.1| DNA repair protein RadC [Peptostreptococcus stomatis DSM 17678] gi|306493500|gb|EFM65479.1| DNA repair protein RadC [Peptostreptococcus stomatis DSM 17678] Length = 228 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I+D S G+++ V+ RE+ ++ + +IIL+HNHPSGN PS DI Sbjct: 132 ILLNTKNEIISDVDVSIGSLNSSIVHPREVFIEAIKRRSNAIILMHNHPSGNSEPSKEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ + L I V DHI+IG + S K Sbjct: 192 MITKRLNECGKMLGINVLDHIVIGDGNYYSLKEN 225 >gi|186894518|ref|YP_001871630.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+] gi|186697544|gb|ACC88173.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+] Length = 156 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + L+ E+ GT+ H V+ RE+V+ L+ +A ++IL HNHPSG S D Sbjct: 61 MYLDNQHCLLESEILFTGTLSHTEVHPREVVKLALKHNAAAVILAHNHPSGTTEISQQDK 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ I+ L + I V DH+++G + VSF ++ Sbjct: 121 HITQRIVKALALMQIRVLDHLVVG-NGVVSFAEQGLL 156 >gi|125973275|ref|YP_001037185.1| DNA repair protein RadC [Clostridium thermocellum ATCC 27405] gi|281417478|ref|ZP_06248498.1| DNA repair protein RadC [Clostridium thermocellum JW20] gi|125713500|gb|ABN51992.1| DNA repair protein RadC [Clostridium thermocellum ATCC 27405] gi|281408880|gb|EFB39138.1| DNA repair protein RadC [Clostridium thermocellum JW20] Length = 223 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N + E+ GTI+ PVY R IV+ L A S+IL HNHP G NPS ADI Sbjct: 125 ICLDAQNRVNYAELVHEGTINEAPVYPRIIVETALRHKANSVILAHNHPGGTLNPSKADI 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I L ++I V DHII+ +VSF ++ Sbjct: 185 EATKRIKAALEAISIKVVDHIIVCGGQYVSFAEKGLL 221 >gi|329119079|ref|ZP_08247771.1| DNA repair protein RadC [Neisseria bacilliformis ATCC BAA-1200] gi|327464818|gb|EGF11111.1| DNA repair protein RadC [Neisseria bacilliformis ATCC BAA-1200] Length = 224 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N LI +RGT+ VY+RE+V+ L+ A ++IL HNHP G+P PS+ADI Sbjct: 128 LLLNSRNRLIDCVELARGTVAENAVYVREVVKLALDRHAAALILAHNHPGGSPEPSEADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + L +++ + DH +I VSF ++ Sbjct: 188 AFTGRLKQALELVDVRLLDHFVITAQRAVSFAERGLV 224 >gi|121582506|ref|YP_974038.1| DNA repair protein RadC [Acidovorax sp. JS42] gi|120608564|gb|ABM44303.1| DNA repair protein RadC [Acidovorax sp. JS42] Length = 164 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N +I RGT+ VY RE+V+ L L+A ++I HNHPSG P PS AD Sbjct: 68 IFLDAQNRVIEYIELFRGTLTQTSVYPREVVKTSLRLNAAAVIFAHNHPSGVPEPSRADE 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ + L +++ V DH+++ A VSF ++ Sbjct: 128 NLTRVLKDALALVDVRVLDHVVVAGGASVSFAQRGLL 164 >gi|256003755|ref|ZP_05428743.1| DNA repair protein RadC [Clostridium thermocellum DSM 2360] gi|255992316|gb|EEU02410.1| DNA repair protein RadC [Clostridium thermocellum DSM 2360] gi|316940493|gb|ADU74527.1| DNA repair protein RadC [Clostridium thermocellum DSM 1313] Length = 224 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N + E+ GTI+ PVY R IV+ L A S+IL HNHP G NPS ADI Sbjct: 126 ICLDAQNRVNYAELVHEGTINEAPVYPRIIVETALRHKANSVILAHNHPGGTLNPSKADI 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I L ++I V DHII+ +VSF ++ Sbjct: 186 EATKRIKAALEAISIKVVDHIIVCGGQYVSFAEKGLL 222 >gi|169829398|ref|YP_001699556.1| DNA repair protein radC-like protein [Lysinibacillus sphaericus C3-41] gi|168993886|gb|ACA41426.1| DNA repair protein radC-like protein [Lysinibacillus sphaericus C3-41] Length = 223 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I + G+++ V+ REI + ++ SA SII HNHPSG P PS+ DI Sbjct: 127 LFLNIKNQIIHRQTIFIGSLNASIVHPREIFREAVKRSAASIICAHNHPSGVPTPSEEDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ I + I + DH+IIG F+S K Sbjct: 187 EVTKRIEEAGYIMGIELIDHVIIGDHQFISLKEKGY 222 >gi|163851630|ref|YP_001639673.1| DNA repair protein RadC [Methylobacterium extorquens PA1] gi|163663235|gb|ABY30602.1| DNA repair protein RadC [Methylobacterium extorquens PA1] Length = 248 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 61/97 (62%), Positives = 79/97 (81%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADEVQ RGT+DH PVY RE+ +R LEL++T+IIL HNHPSG+P PS ADI Sbjct: 152 LFLDRRNHLIADEVQGRGTVDHTPVYPREVARRALELASTAIILAHNHPSGDPAPSGADI 211 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I++ L+PL I+VHDH+I+G+D S KGL++I Sbjct: 212 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 248 >gi|91201867|emb|CAJ74927.1| similar to DNA repair protein RadC [Candidatus Kuenenia stuttgartiensis] Length = 232 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 53/94 (56%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD N +I + S G++ V+ RE+ ++ SA S++ VHNHPSG+P PS DI Sbjct: 136 LLDNKNRIIKELTISIGSLTLSIVHPREVFSPAIKESAASVVFVHNHPSGDPEPSKEDIQ 195 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +TQ + N + I V DHII+G +VS + Sbjct: 196 ITQRLQEVGNIVGIKVLDHIIVGNGCYVSLRDKG 229 >gi|83589400|ref|YP_429409.1| DNA repair protein RadC [Moorella thermoacetica ATCC 39073] gi|123524970|sp|Q2RL23|Y536_MOOTA RecName: Full=UPF0758 protein Moth_0536 gi|83572314|gb|ABC18866.1| DNA replication and repair protein RadC [Moorella thermoacetica ATCC 39073] Length = 229 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 55/95 (57%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N ++ + S G+++ + RE+ + + SA +IIL HNHPSG+P PS DI + Sbjct: 135 LNTKNQVLGIDNVSVGSLNSSLAHPREVFKDPIRRSAAAIILAHNHPSGDPTPSQEDIMV 194 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ + L I V DH+IIG F S K ++ Sbjct: 195 TRRLVEAGHILGIEVLDHLIIGDGRFTSLKERNLL 229 >gi|327439515|dbj|BAK15880.1| DNA repair protein [Solibacillus silvestris StLB046] Length = 232 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N ++ + G+++ V+ REI + ++ SA SII HNHPSG P PS DI Sbjct: 136 LFLNVKNQVLHKQTIFVGSLNASIVHPREIFREAVKRSAASIICSHNHPSGIPTPSPEDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T + + + + DH+IIG F+S K Sbjct: 196 DVTTRLYEAGKIVGVDLLDHVIIGDHQFISMKEKGY 231 >gi|323141285|ref|ZP_08076181.1| DNA repair protein RadC [Phascolarctobacterium sp. YIT 12067] gi|322414242|gb|EFY05065.1| DNA repair protein RadC [Phascolarctobacterium sp. YIT 12067] Length = 252 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I E+ S G++ + V+ RE+ + A SI + HNHPSG+P PS D Sbjct: 154 ILLNSKNKVIGTELVSEGSLTNSVVHPREVFLPAILQHAASICVAHNHPSGDPQPSIEDR 213 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L I + DH+IIG A+ SF+ + Sbjct: 214 QLTAVLLAAGQTLGIPLLDHLIIGDGAYYSFQEDGAL 250 >gi|254561399|ref|YP_003068494.1| DNA repair protein RadC [Methylobacterium extorquens DM4] gi|254268677|emb|CAX24636.1| DNA repair protein RadC [Methylobacterium extorquens DM4] Length = 248 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 61/97 (62%), Positives = 79/97 (81%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADEVQ RGT+DH PVY RE+ +R LEL++T+IIL HNHPSG+P PS ADI Sbjct: 152 LFLDRRNHLIADEVQGRGTVDHTPVYPREVARRALELASTAIILAHNHPSGDPAPSGADI 211 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I++ L+PL I+VHDH+I+G+D S KGL++I Sbjct: 212 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 248 >gi|83648347|ref|YP_436782.1| DNA repair protein [Hahella chejuensis KCTC 2396] gi|83636390|gb|ABC32357.1| DNA repair protein [Hahella chejuensis KCTC 2396] Length = 183 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 41/96 (42%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIA EV RG ID +Y RE+V+ L +A +I+ HNHPSG+P PS D Sbjct: 75 LFLDTQNRLIAYEVLFRGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQ 134 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T ++ L + I + DH ++G D VS I Sbjct: 135 LITYRLLQALMLVEIPLIDHFVVGGDQVVSMAAQGI 170 >gi|160897347|ref|YP_001562929.1| DNA repair protein RadC [Delftia acidovorans SPH-1] gi|238687206|sp|A9BYK1|Y1904_DELAS RecName: Full=UPF0758 protein Daci_1904 gi|160362931|gb|ABX34544.1| DNA repair protein RadC [Delftia acidovorans SPH-1] Length = 226 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E RGT+ VY RE+V R L A ++IL HNHPSG S AD Sbjct: 130 LFLDGQHRLIALEEMFRGTLTRTSVYPREVVLRALHHHAGAVILAHNHPSGQVQASAADK 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQN+ L ++I V DH+I+ A +S G ++ Sbjct: 190 AVTQNLQAALRLVDIQVLDHVIVAPGASLSMAGQGML 226 >gi|291087662|ref|ZP_06347068.2| DNA repair protein RadC [Clostridium sp. M62/1] gi|291074382|gb|EFE11746.1| DNA repair protein RadC [Clostridium sp. M62/1] Length = 252 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + + N+LI + RGT++ REI L A + LVHNHPSG+P+PS DI Sbjct: 156 MMFNTKNMLIRESCLFRGTVNASVASAREIFIEALRYHAVRLALVHNHPSGDPSPSGEDI 215 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L + + DH+IIG +++ SFK II Sbjct: 216 RLTRQVAQAGELLGVTLLDHVIIGDNSYFSFKERGII 252 >gi|114767352|ref|ZP_01446159.1| DNA repair protein RadC [Pelagibaca bermudensis HTCC2601] gi|114540556|gb|EAU43631.1| DNA repair protein RadC [Roseovarius sp. HTCC2601] Length = 168 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 3/100 (3%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD+ N LI D++ SRG+IDHVPVY+ E+++ L L A+++IL HNHPSG+P PS ADI Sbjct: 67 LLLDRKNKLIRDKIMSRGSIDHVPVYVSEVMRSALVLDASALILCHNHPSGDPQPSQADI 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAF---VSFKGLRII 97 +MT+ I+ ++I +HDH+I+G S + ++ Sbjct: 127 DMTRKIVDACRVMDITLHDHLIVGFGREQAAFSMRAAGML 166 >gi|326391442|ref|ZP_08212978.1| DNA repair protein RadC [Thermoanaerobacter ethanolicus JW 200] gi|325992521|gb|EGD50977.1| DNA repair protein RadC [Thermoanaerobacter ethanolicus JW 200] Length = 226 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +IA E S G+++ V+ RE+ + +E S++SIILVHNHPSG+P PS DI Sbjct: 127 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSSSSIILVHNHPSGDPTPSREDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ ++ N L I V DH+IIG +S K Sbjct: 187 EVTKRLVEGGNILGIKVLDHVIIGDGRGISLKEKGY 222 >gi|307266691|ref|ZP_07548219.1| DNA repair protein RadC [Thermoanaerobacter wiegelii Rt8.B1] gi|306918293|gb|EFN48539.1| DNA repair protein RadC [Thermoanaerobacter wiegelii Rt8.B1] Length = 226 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +IA E S G+++ V+ RE+ + +E S++SIILVHNHPSG+P PS DI Sbjct: 127 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSSSSIILVHNHPSGDPTPSREDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ ++ + L I V DH+IIG +S K Sbjct: 187 EVTKRLVEGGDILGIKVLDHVIIGDGRGISLKEKGY 222 >gi|304439839|ref|ZP_07399733.1| DNA repair protein RadC [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371578|gb|EFM25190.1| DNA repair protein RadC [Peptoniphilus duerdenii ATCC BAA-1640] Length = 245 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 59/95 (62%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD LI S+GT+D V+ RE+ + +E++A SII+ HNHPSG+P PS D ++ Sbjct: 150 LDTKKCLIKSSEISKGTLDATVVHPREVFREAIEVNAHSIIISHNHPSGDPVPSQKDRDI 209 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T ++ + LNI + DHI+IG+ + SF+ I+ Sbjct: 210 TNILLKAGDILNIELVDHIVIGRGKYFSFREEGIL 244 >gi|150015380|ref|YP_001307634.1| DNA repair protein RadC [Clostridium beijerinckii NCIMB 8052] gi|189029392|sp|A6LQP8|Y490_CLOB8 RecName: Full=UPF0758 protein Cbei_0490 gi|149901845|gb|ABR32678.1| DNA repair protein RadC [Clostridium beijerinckii NCIMB 8052] Length = 229 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ NI++ + +G+++ V+ REI ++ + ++ SII+ HNHPSG+P PS DI Sbjct: 133 VLLNTKNIVVGIKDVFKGSLNTSVVHPREIFKQAISKNSASIIICHNHPSGDPTPSREDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T I N + I + DHIIIG + FVS K +I Sbjct: 193 NITLRIKECGNIIGIQLVDHIIIGNNKFVSLKERGLI 229 >gi|290969098|ref|ZP_06560628.1| putative DNA repair protein RadC [Megasphaera genomosp. type_1 str. 28L] gi|290780858|gb|EFD93456.1| putative DNA repair protein RadC [Megasphaera genomosp. type_1 str. 28L] Length = 229 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 54/95 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL N LI + S GT++ R++ + ++ +A S++LVHNHPSG+P PS DI Sbjct: 133 VFLSVKNRLITVQTLSVGTLNASLARARDVFRLAMQYNAASVVLVHNHPSGDPEPSREDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ I+ + I V DHIIIG FVS Sbjct: 193 LLTKQIVKAGEIMGIPVLDHIIIGDGTFVSLCERG 227 >gi|238750426|ref|ZP_04611927.1| DNA repair protein RadC [Yersinia rohdei ATCC 43380] gi|238711357|gb|EEQ03574.1| DNA repair protein RadC [Yersinia rohdei ATCC 43380] Length = 156 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + L+ E GT+ H V+ RE+V+ L+ +A ++IL HNHPSG S D Sbjct: 61 MYLDNQHCLLERETLFTGTLCHTEVHPREVVKSALKHNAAAVILAHNHPSGTTEISQQDK 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ I+ L + + V DH+++G VSF ++ Sbjct: 121 HITQRIVKALALVEVRVLDHLVVG-SEVVSFAERGLL 156 >gi|89052777|ref|YP_508228.1| DNA repair protein RadC [Jannaschia sp. CCS1] gi|88862326|gb|ABD53203.1| DNA repair protein RadC [Jannaschia sp. CCS1] Length = 257 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 52/97 (53%), Positives = 74/97 (76%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N+L+ADE Q+ GT+DHVPVY RE+++R LEL+AT++ILVHNHPSG+P PS+AD+ Sbjct: 161 LYLDRKNVLVADEAQADGTVDHVPVYPREVIKRALELNATALILVHNHPSGDPTPSEADV 220 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I + NI +HDH++IGK +SF+ + Sbjct: 221 QMTMAIRDAADVFNIAIHDHLVIGKARELSFRAEGYL 257 >gi|269137403|ref|YP_003294103.1| DNA repair protein [Edwardsiella tarda EIB202] gi|267983063|gb|ACY82892.1| DNA repair protein [Edwardsiella tarda EIB202] Length = 147 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N ++ GT++ VY RE+V+ L+ +A ++ILVHNHPSG+P SDADI Sbjct: 51 LLLDNRNRVLLWRELFYGTLNQTAVYPREVVKLALQHNAAAVILVHNHPSGHPEASDADI 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + +++ + DH I+ D VS ++ Sbjct: 111 ALTRRLQQAMALIDVRIPDHFIVAGDHTVSMAERGLL 147 >gi|237745564|ref|ZP_04576044.1| DNA repair protein radC [Oxalobacter formigenes HOxBLS] gi|229376915|gb|EEO27006.1| DNA repair protein radC [Oxalobacter formigenes HOxBLS] Length = 224 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LI RGT+ H VY RE+V+ L +A ++I HNHP G+ PS+AD Sbjct: 128 LFLDIKNKLIESSEMFRGTLSHTSVYPREVVKAALGRNAANVIFAHNHPFGSAEPSNADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ L ++I V DHII+ SF I+ Sbjct: 188 TLTRSLKQALGLVDIRVLDHIIVAGKNTYSFAEYGIL 224 >gi|66768348|ref|YP_243110.1| putative DNA repair protein RadC [Xanthomonas campestris pv. campestris str. 8004] gi|188991850|ref|YP_001903860.1| putative RadC family DNA repair protein [Xanthomonas campestris pv. campestris str. B100] gi|66573680|gb|AAY49090.1| putative DNA repair protein RadC [Xanthomonas campestris pv. campestris str. 8004] gi|167733610|emb|CAP51815.1| putative RadC family DNA repair protein [Xanthomonas campestris pv. campestris] Length = 164 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F+D + ++A E RGTI+ V+ R IVQR L L+A ++IL H HPSG PS+AD Sbjct: 68 VFMDNLHQVLACEPMFRGTINSATVHARVIVQRALALNAAAVILSHQHPSGATEPSNADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DHIIIGK SF ++ Sbjct: 128 TLTHQLEAALALIDVRVLDHIIIGKGTPFSFAERGLL 164 >gi|313501259|gb|ADR62625.1| RadC [Pseudomonas putida BIRD-1] Length = 175 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +A E+ RGTID VY RE+V+R L +A ++IL HNHPSG PS D+ Sbjct: 77 LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDV 136 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T ++ L +++ V DHIIIG +S I Sbjct: 137 HLTLSLKRGLALIDVRVLDHIIIGDGEPLSMVEHGWI 173 >gi|326387170|ref|ZP_08208780.1| DNA repair protein RadC [Novosphingobium nitrogenifigens DSM 19370] gi|326208351|gb|EGD59158.1| DNA repair protein RadC [Novosphingobium nitrogenifigens DSM 19370] Length = 301 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 48/97 (49%), Positives = 67/97 (69%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N L+ D+V S GT+D +Y REI+ + + + A S+ILVHNHPSG+P PS ADI Sbjct: 205 LYLNVQNRLLLDQVVSDGTLDESAIYTREIIGKAMAIGAASLILVHNHPSGSPQPSRADI 264 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ +I LNI+VHDH+IIG++ VS K +I Sbjct: 265 QVTQKVIEAGRHLNIVVHDHVIIGREGHVSLKAKGLI 301 >gi|312795310|ref|YP_004028232.1| DNA repair protein radC [Burkholderia rhizoxinica HKI 454] gi|312167085|emb|CBW74088.1| DNA repair protein radC [Burkholderia rhizoxinica HKI 454] Length = 239 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD +I E SRG++ H VY RE+V+R LE +A ++I+ HNHPSG PS AD+ Sbjct: 143 LFLDTRLRMIHAEELSRGSLSHAAVYPREVVRRALETNAAALIIAHNHPSGAAQPSAADL 202 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT+ + L ++I + DH I+ D +S ++ Sbjct: 203 SMTRTLKNALCLMDIKLLDHFIVTSDTILSLARHGLL 239 >gi|310819987|ref|YP_003952345.1| DNA repair protein RadC [Stigmatella aurantiaca DW4/3-1] gi|309393059|gb|ADO70518.1| DNA repair protein RadC [Stigmatella aurantiaca DW4/3-1] Length = 249 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L + N+L+ + + GT++ PV RE+ L L AT+++ HNHPSG+P PS D+ Sbjct: 137 LCFNPRNVLLGNVRVAEGTMNTCPVDPREVYAAALSLRATALVFAHNHPSGDPEPSAQDV 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L I V DH+++G +VS ++ Sbjct: 197 RLTAQLAEAGQLLGIKVLDHLVLGDGTYVSLLERGLL 233 >gi|83648279|ref|YP_436714.1| DNA repair protein [Hahella chejuensis KCTC 2396] gi|83636322|gb|ABC32289.1| DNA repair protein [Hahella chejuensis KCTC 2396] Length = 183 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 41/96 (42%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIA EV RG ID +Y RE+V+ L +A +I+ HNHPSG+P PS D Sbjct: 75 LFLDTQNRLIAYEVLFRGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQ 134 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T ++ L + I + DH ++G D VS I Sbjct: 135 LITYRLLQALMLVEIPLIDHFVVGGDQVVSMAAQGI 170 >gi|194333569|ref|YP_002015429.1| DNA repair protein RadC [Prosthecochloris aestuarii DSM 271] gi|229470324|sp|B4S6M7|Y735_PROA2 RecName: Full=UPF0758 protein Paes_0735 gi|194311387|gb|ACF45782.1| DNA repair protein RadC [Prosthecochloris aestuarii DSM 271] Length = 223 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 58/95 (61%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +I E+ S GT++ ++ REI + + SA +II+VHNHPSG+ S+AD + Sbjct: 128 LNTKNQIIRHEIISVGTLNASLIHPREIFKEAIRESAHAIIVVHNHPSGDVEASNADKQV 187 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + + L I + DH+IIG++ + SF+ ++ Sbjct: 188 TAVLKKAGSLLQIELLDHVIIGRETYFSFREHSLL 222 >gi|210612724|ref|ZP_03289439.1| hypothetical protein CLONEX_01641 [Clostridium nexile DSM 1787] gi|210151417|gb|EEA82425.1| hypothetical protein CLONEX_01641 [Clostridium nexile DSM 1787] Length = 232 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI + S+GT++ V RE+ LE +A SIIL+HNHPSG+P PS DI Sbjct: 136 LMLNTKSKLIGETDISKGTVNASLVSPRELFIEALEKNAVSIILMHNHPSGDPTPSKNDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + N + I + DHIIIG + ++SF R++ Sbjct: 196 LLTKRVTDAGNLIGIELLDHIIIGNNCYISFAEQRLL 232 >gi|114567158|ref|YP_754312.1| DNA repair protein RadC [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317861|sp|Q0AWG3|Y1642_SYNWW RecName: Full=UPF0758 protein Swol_1642 gi|114338093|gb|ABI68941.1| DNA repair protein RadC [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 235 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ LI + S G + V+ RE+ + ++ SA S+ILVHNHPSG+P PS DI Sbjct: 139 LYLDRKGGLITMQDISIGGLHSSIVHPREVFKTAVKKSAASMILVHNHPSGDPTPSQEDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I + I + DH+IIG+ + S K +I Sbjct: 199 EITRRLIEAGKIMGIEILDHVIIGEINYCSLKARGLI 235 >gi|300721251|ref|YP_003710521.1| hypothetical protein XNC1_0176 [Xenorhabdus nematophila ATCC 19061] gi|297627738|emb|CBJ88264.1| putative associated with replication fork, DNA repair protein [Xenorhabdus nematophila ATCC 19061] Length = 230 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L N +I + +GTI+ V ++ REIV+ ++++A SIIL HNHPSGNP PS AD Sbjct: 134 LCLTNQNKVICHDEMFKGTINKVEIHPREIVKLAVKVNAASIILAHNHPSGNPEPSLADK 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II + + + V DHI+IGK VSF I Sbjct: 194 VVTEKIIEACDLVGVKVLDHIVIGKQYCVSFMERGWI 230 >gi|310639685|ref|YP_003944443.1| DNA repair protein-like protein [Paenibacillus polymyxa SC2] gi|309244635|gb|ADO54202.1| DNA repair protein-like protein [Paenibacillus polymyxa SC2] Length = 199 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 54/95 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I E+ S G+++ ++ RE+ + + SI+ VHNHPSG+P PS+ DI Sbjct: 103 LLLNTKNRVIHKEIVSIGSLNATVIHPREVFGAAIRHCSASIVCVHNHPSGDPKPSEQDI 162 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 T+ + + + I V DH+IIG+ F S K Sbjct: 163 MATKRLAKAGDIIGIDVLDHVIIGESTFYSIKEHG 197 >gi|83814790|ref|YP_446439.1| DNA repair protein RadC [Salinibacter ruber DSM 13855] gi|123528135|sp|Q2S042|Y2338_SALRD RecName: Full=UPF0758 protein SRU_2338 gi|83756184|gb|ABC44297.1| DNA repair protein RadC [Salinibacter ruber DSM 13855] Length = 233 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N++I D S G + V R + ++ + A ++I +HNHPSGNP PS DI Sbjct: 136 VHLNTANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGNPEPSREDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I VHDH+II S +I Sbjct: 196 RITRQLAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 232 >gi|167037861|ref|YP_001665439.1| DNA repair protein RadC [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040758|ref|YP_001663743.1| DNA repair protein RadC [Thermoanaerobacter sp. X514] gi|166854998|gb|ABY93407.1| DNA repair protein RadC [Thermoanaerobacter sp. X514] gi|166856695|gb|ABY95103.1| DNA repair protein RadC [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 236 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +IA E S G+++ V+ RE+ + +E S++SIILVHNHPSG+P PS DI Sbjct: 137 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSSSSIILVHNHPSGDPTPSREDI 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ ++ N L I V DH+IIG +S K Sbjct: 197 EVTKRLVEGGNILGIKVLDHVIIGDGRGISLKEKGY 232 >gi|323489982|ref|ZP_08095203.1| DNA repair protein radC-like protein [Planococcus donghaensis MPA1U2] gi|323396278|gb|EGA89103.1| DNA repair protein radC-like protein [Planococcus donghaensis MPA1U2] Length = 224 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N ++ + G+++ V+ REI + + S SI+ HNHPSGNP PS DI Sbjct: 128 LFLNIKNQVMHRQTIFVGSLNASIVHPREIFREAVRRSTASIVCAHNHPSGNPAPSPEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + + I + DH+IIG F+S K + Sbjct: 188 EVTKRLVEAGSIIGIELLDHVIIGDHQFISLKEKGFM 224 >gi|158320795|ref|YP_001513302.1| DNA repair protein RadC [Alkaliphilus oremlandii OhILAs] gi|172048007|sp|A8MHM4|Y1766_ALKOO RecName: Full=UPF0758 protein Clos_1766 gi|158140994|gb|ABW19306.1| DNA repair protein RadC [Alkaliphilus oremlandii OhILAs] Length = 232 Score = 123 bits (310), Expect = 7e-27, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L + +IA E S G+++ V+ RE+ R ++ S+++IIL HNHPSG+PNPS DI Sbjct: 136 LLLTTKHDIIAIENISVGSLNASIVHPREVFNRAIKRSSSAIILAHNHPSGDPNPSGEDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ +I N + I V DHIIIG + S K ++I Sbjct: 196 NITKRLIEAGNIIGISVLDHIIIGDGVYFSMKEHKLI 232 >gi|301060527|ref|ZP_07201367.1| putative DNA repair protein RadC [delta proteobacterium NaphS2] gi|300445370|gb|EFK09295.1| putative DNA repair protein RadC [delta proteobacterium NaphS2] Length = 243 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 55/96 (57%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FL + N +I D G++ VY REI+ LE A ++ VHNHPSG+P PS D + Sbjct: 134 FLTRKNQVITDCDLFEGSLTGSAVYPREIMTLALEHKAAGLVFVHNHPSGDPAPSPEDQH 193 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++++ + I V DH+IIG + + SF +I Sbjct: 194 LTRDLVWAAMLMGIQVLDHLIIGNNRYFSFADQGVI 229 >gi|71277925|ref|YP_269651.1| DNA repair protein, RadC family protein [Colwellia psychrerythraea 34H] gi|71143665|gb|AAZ24138.1| DNA repair protein, RadC family protein [Colwellia psychrerythraea 34H] Length = 158 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + +I RGTID VY RE+V+ L +A ++IL HNHPSG +PS AD Sbjct: 63 MLLDNQHQMIDFVELFRGTIDASAVYPREVVKTVLLENAAAVILTHNHPSGLNSPSIADK 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ V DHIIIG+ + SF ++ Sbjct: 123 DITKRLQEALALIDVRVLDHIIIGEGTY-SFAENGLL 158 >gi|256750969|ref|ZP_05491852.1| DNA repair protein RadC [Thermoanaerobacter ethanolicus CCSD1] gi|300914796|ref|ZP_07132112.1| DNA repair protein RadC [Thermoanaerobacter sp. X561] gi|307723970|ref|YP_003903721.1| DNA repair protein RadC [Thermoanaerobacter sp. X513] gi|320116278|ref|YP_004186437.1| DNA repair protein RadC [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|256750079|gb|EEU63100.1| DNA repair protein RadC [Thermoanaerobacter ethanolicus CCSD1] gi|300889731|gb|EFK84877.1| DNA repair protein RadC [Thermoanaerobacter sp. X561] gi|307581031|gb|ADN54430.1| DNA repair protein RadC [Thermoanaerobacter sp. X513] gi|319929369|gb|ADV80054.1| DNA repair protein RadC [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 226 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +IA E S G+++ V+ RE+ + +E S++SIILVHNHPSG+P PS DI Sbjct: 127 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSSSSIILVHNHPSGDPTPSREDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ ++ N L I V DH+IIG +S K Sbjct: 187 EVTKRLVEGGNILGIKVLDHVIIGDGRGISLKEKGY 222 >gi|300853909|ref|YP_003778893.1| DNA repair protein, RadC family [Clostridium ljungdahlii DSM 13528] gi|300434024|gb|ADK13791.1| DNA repair protein, RadC family [Clostridium ljungdahlii DSM 13528] Length = 230 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ NI+I G+++ V+ RE+ ++ ++ SII+ HNHPSG+P+PS+ DI Sbjct: 132 IMLNTKNIVIGIRDVFIGSLNSALVHPREVFYYAIKKNSASIIVCHNHPSGDPSPSNEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 N+T + L I + DH+IIG + +VS K I Sbjct: 192 NITHRLKECGELLGIQLLDHLIIGNEIYVSLKQKGI 227 >gi|170747019|ref|YP_001753279.1| DNA repair protein RadC [Methylobacterium radiotolerans JCM 2831] gi|170653541|gb|ACB22596.1| DNA repair protein RadC [Methylobacterium radiotolerans JCM 2831] Length = 248 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 62/97 (63%), Positives = 77/97 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ RGT+DH PVY RE+ +R LELSAT+IIL HNHPSG+P PS AD+ Sbjct: 152 LFLDKRNHLIADEVQGRGTVDHTPVYPREVARRALELSATAIILAHNHPSGDPAPSAADV 211 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I+ L PL I+VHDH+I+G++ S KGL++I Sbjct: 212 AMTREIVAVLAPLKIVVHDHVILGRNGHASLKGLKLI 248 >gi|21673446|ref|NP_661511.1| DNA repair protein RadC [Chlorobium tepidum TLS] gi|30580476|sp|Q8KES1|Y611_CHLTE RecName: Full=UPF0758 protein CT0611 gi|21646548|gb|AAM71853.1| DNA repair protein RadC [Chlorobium tepidum TLS] Length = 222 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL N ++ E + GT+ ++ REI + + SA SIILVHNHPSG+ PS+AD Sbjct: 126 LFLSTKNQILRHETITIGTLTASLIHPREIFKAAIRESAHSIILVHNHPSGDVQPSNADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + L I + DH+I+G + + SF+ ++ Sbjct: 186 QVTSILKKAGDLLQIELLDHVIVGNNDWFSFRDHALL 222 >gi|300113050|ref|YP_003759625.1| DNA repair protein RadC [Nitrosococcus watsonii C-113] gi|299538987|gb|ADJ27304.1| DNA repair protein RadC [Nitrosococcus watsonii C-113] Length = 224 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A E RGTID V+ RE+++R L +A + IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVLAFEELFRGTIDGASVHPREVLKRALAHNAAAAILAHNHPSGIAEPSRADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L ++I V DHII+G SF +I Sbjct: 188 CITQRLKEALALVDIRVLDHIIVGDGETFSFAERGLI 224 >gi|310659827|ref|YP_003937548.1| hypothetical protein CLOST_2528 [Clostridium sticklandii DSM 519] gi|308826605|emb|CBH22643.1| conserved protein of unknown function [Clostridium sticklandii] Length = 159 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 55/92 (59%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD N + V S+G+++ V+ RE+ + + +A +++L HNHPSGNP PS DI + Sbjct: 65 LDTKNQPTSVNVCSKGSLNASLVHPREVFKTAVISNAATVLLAHNHPSGNPEPSKEDIKI 124 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ + L I V DH+IIG D++ SFK Sbjct: 125 TKRLNEAGKILGIKVLDHLIIGSDSYYSFKEQ 156 >gi|121602861|ref|YP_989118.1| RadC family DNA repair protein [Bartonella bacilliformis KC583] gi|120615038|gb|ABM45639.1| DNA repair protein, RadC family [Bartonella bacilliformis KC583] Length = 265 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK + L++DEVQ GTID PVY RE+V R LELSA+ IILVHNHPSG+ +PS DI Sbjct: 169 LFLDKKHGLLSDEVQQTGTIDRTPVYPREVVSRALELSASGIILVHNHPSGDASPSQEDI 228 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT + N L+I +HDH+II ++ ++SFK L++I Sbjct: 229 SMTYRLKDVANALDITLHDHLIIARNDYISFKALKLI 265 >gi|157827698|ref|YP_001496762.1| DNA repair protein RadC [Rickettsia bellii OSU 85-389] gi|157803002|gb|ABV79725.1| DNA repair protein RadC [Rickettsia bellii OSU 85-389] Length = 249 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 56/97 (57%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+K NILIADEV S+GTID VY REI++R L A++IILVHNHPSG+P+PS ADI Sbjct: 153 LFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKADI 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT I+ +NIIVHDH+II + + SFK ++ Sbjct: 213 DMTNIIVDMCKTINIIVHDHVIISNNKYFSFKSNMLL 249 >gi|171912382|ref|ZP_02927852.1| DNA repair protein RadC [Verrucomicrobium spinosum DSM 4136] Length = 231 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 5/102 (4%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ L+ DEV +GT++ P + REI++ L A + IL HNHPSG+P PS+AD Sbjct: 130 LVLNTKLCLVHDEVVFQGTLNESPAHPREIIRAALIHRAHAFILAHNHPSGDPAPSEADR 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDA-----FVSFKGLRII 97 T+ I + I + DH++IG + SFK +I Sbjct: 190 RFTRRINEAAQLMQIELLDHVVIGAPRPGAKPYFSFKESGMI 231 >gi|77459227|ref|YP_348734.1| DNA repair protein RadC [Pseudomonas fluorescens Pf0-1] gi|77383230|gb|ABA74743.1| putative DNA repair protein [Pseudomonas fluorescens Pf0-1] Length = 164 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A EV G+ID VY R++V+R L +A + I VHNHPSG PS AD Sbjct: 68 IFLDARHRVLAFEVLFHGSIDGASVYPRQVVKRSLAHNAAATIFVHNHPSGCTEPSQADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L + + V DH I+G+ +S + Sbjct: 128 VLTARLKEALALIEVRVLDHFIVGEGRPLSLAEHGWL 164 >gi|304559927|gb|ADM42591.1| DNA repair protein RadC family protein [Edwardsiella tarda FL6-60] Length = 161 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+ E G+++HV V+ RE+V+ L +A +++L HNHPSG+P PS AD Sbjct: 65 LYLDNLHCLLESETLFAGSVNHVQVHPREVVKSALRFNAAAVVLAHNHPSGDPEPSKADR 124 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L +++ DH+++G+D VSF I Sbjct: 125 QLTDRIKEVLGLVDVKTLDHLVVGQDGIVSFAERGWI 161 >gi|254418550|ref|ZP_05032274.1| DNA repair protein RadC [Brevundimonas sp. BAL3] gi|196184727|gb|EDX79703.1| DNA repair protein RadC [Brevundimonas sp. BAL3] Length = 205 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 52/97 (53%), Positives = 71/97 (73%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+ DE + GT+DH PVY RE+V+R LELSA+++ILVHNHPSG+P PS ADI Sbjct: 109 LYLDHRNTLLRDEWVAEGTVDHAPVYPREVVRRALELSASAMILVHNHPSGDPTPSHADI 168 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ ++ L++ VHDH++IG+ SFK L +I Sbjct: 169 EMTRKVVNAAEALSLKVHDHLVIGRAGTASFKALGLI 205 >gi|224827125|ref|ZP_03700221.1| DNA repair protein RadC [Lutiella nitroferrum 2002] gi|224600634|gb|EEG06821.1| DNA repair protein RadC [Lutiella nitroferrum 2002] Length = 224 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL N ++A E GT+ VY RE+V+R L +A +I+ HNHPSG PS AD Sbjct: 128 IFLTAQNRVLAVEEVFSGTLSETRVYPREVVRRALAHNAAGVIVAHNHPSGVAEPSSADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + TL +++ + DH +I SF + Sbjct: 188 ALTDTLKATLQLVDVRLLDHFVITGSHAESFAERGWL 224 >gi|323527115|ref|YP_004229268.1| DNA repair protein RadC [Burkholderia sp. CCGE1001] gi|323384117|gb|ADX56208.1| DNA repair protein RadC [Burkholderia sp. CCGE1001] Length = 254 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E +RGT+ + VY REIV+R L L+A S+I+ HNHPSG PS +D Sbjct: 158 LFLDARHRLIRSEESARGTLTRMAVYPREIVRRALALNAASLIVAHNHPSGAVQPSASDC 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + L +++ + DH++IG D+ SF Sbjct: 218 RLTRTLREALALIDVQLVDHLVIGADSVYSFARAGW 253 >gi|194336045|ref|YP_002017839.1| DNA repair protein RadC [Pelodictyon phaeoclathratiforme BU-1] gi|229470323|sp|B4SF75|Y935_PELPB RecName: Full=UPF0758 protein Ppha_0935 gi|194308522|gb|ACF43222.1| DNA repair protein RadC [Pelodictyon phaeoclathratiforme BU-1] Length = 222 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I E+ S GT++ ++ RE+ + ++ S+ +IILVHNHPSG+ PS+AD Sbjct: 126 LHLNTKNQIIKTELVSVGTLNAALIHPREVFKSAIKESSHAIILVHNHPSGDVEPSNADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + I + DHIIIGK SF+ ++ Sbjct: 186 QVTDLLKQASTVIQIDLLDHIIIGKTGCFSFRESGLL 222 >gi|309791140|ref|ZP_07685673.1| DNA repair protein RadC [Oscillochloris trichoides DG6] gi|308226838|gb|EFO80533.1| DNA repair protein RadC [Oscillochloris trichoides DG6] Length = 236 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 55/95 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N + G+++ + + E+ + + ++T+II+VHNHPSG+P PS DI Sbjct: 137 VLLDTKNRVQQISTIYVGSVNTAVIRVGEVFRDAVRKNSTAIIMVHNHPSGDPTPSTEDI 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ I+ L+I V DH+IIG+ +VS + Sbjct: 197 LVTRQIVEAGKLLDIDVLDHLIIGRGRYVSMRERG 231 >gi|228475221|ref|ZP_04059947.1| DNA repair protein RadC [Staphylococcus hominis SK119] gi|228270832|gb|EEK12234.1| DNA repair protein RadC [Staphylococcus hominis SK119] Length = 225 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ NI+I +E GT++ ++ RE+ + S +II++HNHPSG+ PS DI Sbjct: 128 LFLNTKNIVIKEETIFIGTLNSSVIHPREVFNAAIRASCNAIIVIHNHPSGDVTPSKEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG F S Sbjct: 188 ATTIRLKECGQILGIELLDHIIIGDQKFTSLVEEGY 223 >gi|222839521|gb|EEE77858.1| predicted protein [Populus trichocarpa] Length = 226 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LIA E RGT+ VY RE+V R L A ++IL HNHPSG S AD Sbjct: 130 LFLDSQHRLIALEEMFRGTLTRTSVYPREVVLRALHHHAGAVILAHNHPSGQVQASAADK 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ++ L ++I V DH+I+ A +S G ++ Sbjct: 190 AVTQSLQAALGLVDIQVLDHVIVAPGASLSMAGQGML 226 >gi|270307935|ref|YP_003329993.1| DNA repair protein RadC [Dehalococcoides sp. VS] gi|270153827|gb|ACZ61665.1| DNA repair protein RadC [Dehalococcoides sp. VS] Length = 228 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI S G++D V+ RE+ + L SA ++IL HNHPSG+ PS DI Sbjct: 132 LMLDVKSRLIKVGHISAGSLDESVVHPREVFKEALSASAATVILAHNHPSGDTEPSPDDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++ + + + I V DHIIIG +F S K ++ Sbjct: 192 GLSARLREAGSIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >gi|161523974|ref|YP_001578986.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616] gi|189351265|ref|YP_001946893.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616] gi|160341403|gb|ABX14489.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616] gi|189335287|dbj|BAG44357.1| DNA repair protein [Burkholderia multivorans ATCC 17616] Length = 256 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI E +RG++ + VY REIV+ + ++A ++I+ HNHPSG PS D Sbjct: 160 LYLDARHGLIDMEENTRGSLTRMAVYPREIVRSAMRMNAAALIVAHNHPSGAVQPSAEDR 219 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++GK SF + Sbjct: 220 RLTRTLRDALALVDVRLLDHVVVGKADTFSFARAGWL 256 >gi|328954004|ref|YP_004371338.1| DNA repair protein RadC [Desulfobacca acetoxidans DSM 11109] gi|328454328|gb|AEB10157.1| DNA repair protein RadC [Desulfobacca acetoxidans DSM 11109] Length = 230 Score = 123 bits (309), Expect = 9e-27, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N +IA+E GT+D VY R++++ L+ AT +ILVHNHPSG PS AD Sbjct: 134 IFLNSQNEVIAEETIQEGTVDQTVVYPRKVLEAALKHKATGLILVHNHPSGRLTPSTADR 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II PL I VHDH+II K S +I Sbjct: 194 ELTRAIIQAAQPLAITVHDHLIISKQGHYSMAEHHLI 230 >gi|254478306|ref|ZP_05091686.1| DNA repair protein RadC [Carboxydibrachium pacificum DSM 12653] gi|214035771|gb|EEB76465.1| DNA repair protein RadC [Carboxydibrachium pacificum DSM 12653] Length = 228 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 40/95 (42%), Positives = 59/95 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +IA E S G+++ V+ RE+ + +E SA+SIILVHNHPSG+P PS D+ Sbjct: 134 VMLNVKNKIIAIETISIGSLNTSIVHPREVFKAAIERSASSIILVHNHPSGDPTPSRGDV 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ ++ N L I V DH+IIG +S K Sbjct: 194 EVTKRLVEAGNILGIKVLDHVIIGDGRGISLKEKG 228 >gi|21231072|ref|NP_636989.1| RadC family protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768919|ref|YP_243681.1| RadC family protein [Xanthomonas campestris pv. campestris str. 8004] gi|21112702|gb|AAM40913.1| RadC family protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574251|gb|AAY49661.1| RadC family protein [Xanthomonas campestris pv. campestris str. 8004] Length = 159 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E GTID V+ R + +R L+L+A ++IL HNHPSGNP PS+AD Sbjct: 63 VFLDTKHHILATEHLFSGTIDGCDVHPRVVAKRALDLNAVAVILFHNHPSGNPEPSEADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L L+I V DH++IG S + Sbjct: 123 KVTERLKQALALLDIRVLDHLVIGGRQHTSLAARGWV 159 >gi|255262247|ref|ZP_05341589.1| DNA repair protein RadC [Thalassiobium sp. R2A62] gi|255104582|gb|EET47256.1| DNA repair protein RadC [Thalassiobium sp. R2A62] Length = 190 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 51/97 (52%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N LIADE ++GT+ HVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS++DI Sbjct: 94 LYLDRKNTLIADEQLAKGTVVHVPVYPREVVKRALELNASALILVHNHPSGDPTPSESDI 153 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT I L++ +HDH+II K +SFK ++ Sbjct: 154 SMTVQIDQAARALDVTLHDHLIISKSRELSFKSEGLL 190 >gi|147669191|ref|YP_001214009.1| DNA repair protein RadC [Dehalococcoides sp. BAV1] gi|146270139|gb|ABQ17131.1| DNA replication and repair protein RadC [Dehalococcoides sp. BAV1] Length = 228 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI S G+++ V+ RE+ + L SA S+IL HNHPSG+ PS DI Sbjct: 132 LMLDVKSRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDTEPSHDDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++ + + I V DHIIIG +F S K ++ Sbjct: 192 GLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >gi|255280930|ref|ZP_05345485.1| DNA repair protein RadC [Bryantella formatexigens DSM 14469] gi|255268378|gb|EET61583.1| DNA repair protein RadC [Bryantella formatexigens DSM 14469] Length = 231 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 3/100 (3%) Query: 1 LFL---DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSD 57 +FL D L++++ S GT++ V REI L A +IL+HNHPSGNP PS Sbjct: 131 VFLLSFDTKGELLSEKTISVGTVNQSCVSPREIFLEALSCRAVYVILLHNHPSGNPQPSP 190 Query: 58 ADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 D +T + + L I + DHII+G + SF+ I Sbjct: 191 EDRLLTMRVHESGKLLEIPLMDHIILGDRRYFSFREEGFI 230 >gi|118580303|ref|YP_901553.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379] gi|118503013|gb|ABK99495.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379] Length = 166 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N ++ + S G+++ V +RE+++ L SA +I+LVHNHPSG+P PS DI Sbjct: 70 LHLDGKNRIVCLDRVSVGSLNQSIVNVREVLKSALLSSAAAILLVHNHPSGDPTPSGEDI 129 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + I V DHIIIG +VSF ++ Sbjct: 130 AITRRLKESGELICIPVLDHIIIGDGQYVSFVERGLL 166 >gi|314936234|ref|ZP_07843581.1| DNA repair protein RadC [Staphylococcus hominis subsp. hominis C80] gi|313654853|gb|EFS18598.1| DNA repair protein RadC [Staphylococcus hominis subsp. hominis C80] Length = 228 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ NI+I +E GT++ ++ RE+ + S +II++HNHPSG+ PS DI Sbjct: 131 LFLNTKNIVIKEETIFIGTLNSSVIHPREVFNAAIRASCNAIIVIHNHPSGDVTPSKEDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG F S Sbjct: 191 ATTIRLKECGQILGIELLDHIIIGDQKFTSLVEEGY 226 >gi|257066807|ref|YP_003153063.1| DNA repair protein RadC [Anaerococcus prevotii DSM 20548] gi|256798687|gb|ACV29342.1| DNA repair protein RadC [Anaerococcus prevotii DSM 20548] Length = 228 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 57/95 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N++IA EV S G + V RE+ + ++ SA S+ILVHNHPSGNP PS D Sbjct: 132 ILLDSKNVIIAKEVISIGDLGSTVVNPREVFKPAIKKSAKSMILVHNHPSGNPKPSTEDF 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T + + L+I V DHI+IG ++ SFK Sbjct: 192 LITDRLAEAGDILDIKVLDHIVIGNSSYYSFKKEG 226 >gi|206890446|ref|YP_002249007.1| DNA repair protein RadC [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742384|gb|ACI21441.1| DNA repair protein RadC [Thermodesulfovibrio yellowstonii DSM 11347] Length = 222 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 52/95 (54%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + LI GT++H V+ REI + A II VHNHPSG+ PS DI + Sbjct: 125 LDGASNLIQKRTVFIGTLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDSEPSKQDIEI 184 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ L I V DHIII K+ + SF+ ++ Sbjct: 185 TKRLVEIGKMLGIEVIDHIIISKNGYYSFQAEGML 219 >gi|78048960|ref|YP_365135.1| RadC family DNA repair protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037390|emb|CAJ25135.1| RadC family DNA repair protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 187 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E GTID V+ R + +R L+L+A ++IL HNHPSGNP PS+AD Sbjct: 91 VFLDIKHQILATEHLFFGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADR 150 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + L+ L+I V DH++IG +S Sbjct: 151 KVTERLQKALSLLDIRVLDHLVIGGRQHISLAARGW 186 >gi|253700088|ref|YP_003021277.1| DNA repair protein RadC [Geobacter sp. M21] gi|251774938|gb|ACT17519.1| DNA repair protein RadC [Geobacter sp. M21] Length = 167 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 1/95 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N ++ ++ S G+++ V+ RE+ + L SA ++IL+HNHP+G+P PS D+ Sbjct: 72 LHLDGKNRIVCIDMVSTGSLNQSIVHPRELFKTALLSSAAAVILLHNHPTGDPTPSTEDL 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + + I V DHIIIG + + SF Sbjct: 132 TITRRLQEAGELIGIRVLDHIIIGDN-YYSFTERG 165 >gi|221211489|ref|ZP_03584468.1| DNA repair protein RadC [Burkholderia multivorans CGD1] gi|221168850|gb|EEE01318.1| DNA repair protein RadC [Burkholderia multivorans CGD1] Length = 256 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI E +RG++ + VY REIV+ + ++A ++I+ HNHPSG PS D Sbjct: 160 LYLDARHGLIDMEENTRGSLTRMAVYPREIVRSAMRMNAAALIVAHNHPSGAVQPSAEDR 219 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++GK SF + Sbjct: 220 RLTRTLRDALALVDVRLLDHVVVGKADTFSFARAGWL 256 >gi|322807326|emb|CBZ04900.1| DNA repair protein RadC [Clostridium botulinum H04402 065] Length = 228 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+ GT++ V+ REI ++ + SII+ HNHPSG+P PS DI Sbjct: 132 LILNTKNIVTYTRDVFIGTLNSSIVHPREIFCEAIKKNGASIIICHNHPSGDPTPSKEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + + I + DHIIIG++ +VS K I Sbjct: 192 NITLRLKECGKLIGIDLLDHIIIGENKYVSMKEKGTI 228 >gi|222151541|ref|YP_002560697.1| DNA repair protein RadC homolog [Macrococcus caseolyticus JCSC5402] gi|222120666|dbj|BAH18001.1| DNA repair protein RadC homolog [Macrococcus caseolyticus JCSC5402] Length = 223 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 56/95 (58%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ NI++ + G+++ V+ RE+ + ++ SA +II+VHNHPSG+P PS DI Sbjct: 129 LNTKNIVMHESTIFIGSLNASIVHPREVFKEAVKRSAAAIIVVHNHPSGDPEPSYEDIEA 188 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ +I I V DHIIIG +VS K I+ Sbjct: 189 TKRLIKCGEIFGIDVLDHIIIGDGYYVSIKEKGIL 223 >gi|298530828|ref|ZP_07018230.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1] gi|298510202|gb|EFI34106.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1] Length = 160 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LF+D N +I +V ++GT+D +PV+ REI++ + A+ IIL HNHP G PS D Sbjct: 64 LFVDNKNRMICKKVVAKGTVDQIPVFPREIIRHAILKQASGIILGHNHPGGASEPSKQDR 123 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L I V DHIII SF+ + Sbjct: 124 ELTSKIKRIAMELGIRVLDHIIICDSGHFSFQENGYL 160 >gi|187778415|ref|ZP_02994888.1| hypothetical protein CLOSPO_02009 [Clostridium sporogenes ATCC 15579] gi|187772040|gb|EDU35842.1| hypothetical protein CLOSPO_02009 [Clostridium sporogenes ATCC 15579] Length = 228 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+ GT++ V+ REI ++ + SII+ HNHPSG+P PS DI Sbjct: 132 LILNTKNIVTYIRDVFIGTLNSSIVHPREIFCEAIKKNGASIIICHNHPSGDPTPSKEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + + I + DHIIIG++ +VS K I Sbjct: 192 NITLRLKECGKLIGIDLLDHIIIGENKYVSMKEKGTI 228 >gi|289550582|ref|YP_003471486.1| DNA repair protein RadC [Staphylococcus lugdunensis HKU09-01] gi|315658077|ref|ZP_07910949.1| DNA repair protein RadC [Staphylococcus lugdunensis M23590] gi|289180114|gb|ADC87359.1| DNA repair protein RadC [Staphylococcus lugdunensis HKU09-01] gi|315496406|gb|EFU84729.1| DNA repair protein RadC [Staphylococcus lugdunensis M23590] Length = 225 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD NI+I + GT++ ++ REI L ++ S+I+VHNHPSG+ PS DI Sbjct: 128 LFLDTKNIVIKEHTIFVGTLNSTIIHPREIFAAALRYTSNSLIVVHNHPSGDVTPSSEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + + L I + DHIIIG + F S I Sbjct: 188 ATTIRLKECGDILGISLLDHIIIGNNKFTSLCDEGYI 224 >gi|253991430|ref|YP_003042786.1| hypothetical protein PAU_03957 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782880|emb|CAQ86045.1| similar putative radc-like protein ykfg of escherichia coli [Photorhabdus asymbiotica] Length = 156 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+ E+ GT+ H V+ RE+V+ L+ +A ++IL HNHPSG + S D Sbjct: 61 LYLDNQHCLLEREILFTGTLSHTEVHPREVVKLALKYNAAAVILAHNHPSGTTDISQQDK 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ I+ L + + V DH+++G + VSF ++ Sbjct: 121 HITQRIVKALALVEVRVLDHLVVG-NEVVSFAEQGLL 156 >gi|229589475|ref|YP_002871594.1| putative DNA repair protein [Pseudomonas fluorescens SBW25] gi|229361341|emb|CAY48211.1| putative DNA repair protein [Pseudomonas fluorescens SBW25] Length = 164 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A EV G+ID VY R++V+R L +A + I VHNHPSG PS AD Sbjct: 68 IFLDAQHRVLAFEVLFHGSIDGASVYPRQVVKRSLAHNAAAAIFVHNHPSGCTEPSQADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L + + V DH I+G+ +S + Sbjct: 128 VLTARLKEALALIEVRVMDHFIVGEGRPLSLAEYGWL 164 >gi|330818061|ref|YP_004361766.1| DNA repair protein RadC [Burkholderia gladioli BSR3] gi|327370454|gb|AEA61810.1| DNA repair protein RadC [Burkholderia gladioli BSR3] Length = 282 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+ E + G++ + VY REIV+R LE A ++I+ HNHPSG PS D Sbjct: 186 LYLDAQHRLLELEESTIGSLTRMAVYPREIVRRALESGAAALIVAHNHPSGVVRPSAEDR 245 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ + DHI++G+ SF ++ Sbjct: 246 RLTQLLRDALALVDVRLTDHIVVGESETFSFAQAGLL 282 >gi|238790648|ref|ZP_04634412.1| DNA repair protein RadC [Yersinia frederiksenii ATCC 33641] gi|238721253|gb|EEQ12929.1| DNA repair protein RadC [Yersinia frederiksenii ATCC 33641] Length = 194 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + LI E S GT++ VY REIV+ L + ++IL HNHPSG P PS+ D Sbjct: 98 MHLDNQHRLIHCETASLGTLNQTAVYPREIVKTALYHNTAAVILAHNHPSGIPEPSNYDR 157 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + T LN +++ V DHI++G+ A VSF + Sbjct: 158 QMTDRVRTALNLIDVKVLDHIVLGQGAQVSFAERGWL 194 >gi|293375072|ref|ZP_06621363.1| DNA repair protein RadC family protein [Turicibacter sanguinis PC909] gi|292646314|gb|EFF64333.1| DNA repair protein RadC family protein [Turicibacter sanguinis PC909] Length = 149 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 51/96 (53%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L+ N V S G+++ V+ RE+ + + +A S++ HNHPSG+ PSD DI Sbjct: 54 CLNTKNEPTNITVVSVGSLNKAIVHPREVFKTAILSNAASVMAFHNHPSGDTTPSDQDIQ 113 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L I + DH+IIG +F S K + Sbjct: 114 LTHRLVEAGELLGIKLLDHLIIGDGSFTSLKEKGYL 149 >gi|294670872|ref|ZP_06735728.1| hypothetical protein NEIELOOT_02576 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307359|gb|EFE48602.1| hypothetical protein NEIELOOT_02576 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 224 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LI SRGT+ VY+RE+V+ L+ A S+I+ HNHP G PS +DI Sbjct: 128 LLLNRQNRLINCVELSRGTVAENTVYVREVVKLALDHYADSLIVAHNHPGGAAEPSPSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + L +++ + DH I+ VS ++ Sbjct: 188 EWTGRLKQALELVDVRLLDHFIVTARQAVSLAEQGLL 224 >gi|24461706|gb|AAN62275.1|AF440524_62 putative DNA repair protein RadC [Pseudomonas aeruginosa] Length = 166 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL + +IA E RGTID ++ R +VQR L +A+++I H HPSG PS +D Sbjct: 70 VFLTAKHQVIACETLFRGTIDTAQIHPRVVVQRALLHNASALIAAHQHPSGCSEPSSSDE 129 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + L +++ + DH IIGK SF ++ Sbjct: 130 RLTQRLKSALEYVDVRLLDHFIIGKGQPFSFAANALL 166 >gi|84500637|ref|ZP_00998886.1| DNA repair protein [Oceanicola batsensis HTCC2597] gi|84391590|gb|EAQ03922.1| DNA repair protein [Oceanicola batsensis HTCC2597] Length = 251 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 54/97 (55%), Positives = 74/97 (76%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N+L+ADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI Sbjct: 155 LFLDRKNVLVADEPQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSPADI 214 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT + + L I VHDH++IG+ SF+ + Sbjct: 215 DMTAQVAAAADALGITVHDHLVIGRATEFSFRAQGYL 251 >gi|218530437|ref|YP_002421253.1| DNA repair protein RadC [Methylobacterium chloromethanicum CM4] gi|218522740|gb|ACK83325.1| DNA repair protein RadC [Methylobacterium chloromethanicum CM4] Length = 248 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 61/97 (62%), Positives = 79/97 (81%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ N LIADEVQ RGT+DH PVY R + +R LEL++T+IILVHNHPSG+P PS ADI Sbjct: 152 LFLDRRNHLIADEVQGRGTVDHTPVYPRGVARRALELASTAIILVHNHPSGDPAPSKADI 211 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I++ L+PL I+VHDH+I+G+D S KGL++I Sbjct: 212 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 248 >gi|312898568|ref|ZP_07757958.1| putative DNA repair protein RadC [Megasphaera micronuciformis F0359] gi|310620487|gb|EFQ04057.1| putative DNA repair protein RadC [Megasphaera micronuciformis F0359] Length = 229 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L++ N LIA + GT++ R++ + LE +A ++IL+HNHPSG+P PS DI Sbjct: 133 LYVSSKNKLIALRELTSGTLNESLAKARDVFRYALEYNAAAVILIHNHPSGDPTPSKEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 TQ I + I V DHIIIG +VS I Sbjct: 193 KATQCIAEAGRVMGIPVLDHIIIGDGTYVSLCERGYI 229 >gi|127512189|ref|YP_001093386.1| DNA repair protein RadC [Shewanella loihica PV-4] gi|126637484|gb|ABO23127.1| DNA repair protein RadC [Shewanella loihica PV-4] Length = 157 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + LI GTID VY RE+V+ L +A ++IL HNHPSG PS AD Sbjct: 62 MMLDSQHRLIEFNEMFFGTIDAANVYPREVVKAVLLCNAAAVILAHNHPSGCAEPSAADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I L+ +++ V DHI++G VSF + Sbjct: 122 RITERLINALSTIDVPVLDHIVVGD-QCVSFAERGWL 157 >gi|157150253|ref|YP_001450516.1| DNA repair protein RadC [Streptococcus gordonii str. Challis substr. CH1] gi|229485564|sp|A8AXK6|Y1229_STRGC RecName: Full=UPF0758 protein SGO_1229 gi|157075047|gb|ABV09730.1| DNA repair protein [Streptococcus gordonii str. Challis substr. CH1] Length = 226 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G++ REI+ ++ ATSIILVHNHPSG PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSLTRSLAEPREILHYAIKHMATSIILVHNHPSGATRPSRDDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ I + ++ DH+I+G D++ S++ Sbjct: 189 QVTEKIKEACEMMGFVLLDHLIVGGDSYYSYREE 222 >gi|317403649|gb|EFV84137.1| hypothetical protein HMPREF0005_02879 [Achromobacter xylosoxidans C54] Length = 149 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LF+D L++ E GT+D PVY RE+ +R L L+A ++++ HNHPSGN PS+ADI Sbjct: 52 LFMDSQLRLLSAEPLFYGTLDQAPVYPREVARRALMLNAAALVIAHNHPSGNHTPSNADI 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT ++ L +I + DH ++G SF L ++ Sbjct: 112 RMTTSLREALGLFDIRLLDHFVVGAGKMTSFAELGLM 148 >gi|326791184|ref|YP_004309005.1| DNA repair protein RadC [Clostridium lentocellum DSM 5427] gi|326541948|gb|ADZ83807.1| DNA repair protein RadC [Clostridium lentocellum DSM 5427] Length = 234 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 56/96 (58%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD +I E S+G++ V+ RE+ + ++ SA SII VHNHPSG+P PS+ D+ Sbjct: 139 LLDAKCKMIGYETVSKGSLTASIVHPREVYRIAIQKSAHSIIAVHNHPSGDPTPSEEDLQ 198 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + + + I + DHIIIG + SFK + Sbjct: 199 MTKRLQKVGDLVGIPLLDHIIIGDGIYKSFKEESYL 234 >gi|170025352|ref|YP_001721857.1| DNA repair protein RadC [Yersinia pseudotuberculosis YPIII] gi|169751886|gb|ACA69404.1| DNA repair protein RadC [Yersinia pseudotuberculosis YPIII] Length = 156 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + L+ E G+I H V+ RE+V+ L +A ++IL HNHPSG S D Sbjct: 61 MYLDNQHCLLGHEALFTGSISHTEVHPRELVKAALRHNAAAVILAHNHPSGTTEISQQDK 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ I+ L + + V DH+++G + VSF ++ Sbjct: 121 HITQRIVKALALVEVRVLDHLVVG-NEVVSFAEQGLL 156 >gi|148380954|ref|YP_001255495.1| DNA repair protein, RadC family [Clostridium botulinum A str. ATCC 3502] gi|153933543|ref|YP_001385323.1| DNA repair protein RadC [Clostridium botulinum A str. ATCC 19397] gi|153937584|ref|YP_001388731.1| DNA repair protein RadC [Clostridium botulinum A str. Hall] gi|168181688|ref|ZP_02616352.1| DNA repair protein, RadC family [Clostridium botulinum Bf] gi|237796455|ref|YP_002864007.1| DNA repair protein, RadC family [Clostridium botulinum Ba4 str. 657] gi|166218776|sp|A7FXW3|Y3028_CLOB1 RecName: Full=UPF0758 protein CLB_3028 gi|166218777|sp|A5I683|Y3003_CLOBH RecName: Full=UPF0758 protein CBO3003/CLC_2900 gi|259551858|sp|C3L3L0|Y3261_CLOB6 RecName: Full=UPF0758 protein CLJ_B3261 gi|148290438|emb|CAL84565.1| DNA repair protein [Clostridium botulinum A str. ATCC 3502] gi|152929587|gb|ABS35087.1| DNA repair protein, RadC family [Clostridium botulinum A str. ATCC 19397] gi|152933498|gb|ABS38997.1| DNA repair protein, RadC family [Clostridium botulinum A str. Hall] gi|182675184|gb|EDT87145.1| DNA repair protein, RadC family [Clostridium botulinum Bf] gi|229264193|gb|ACQ55226.1| DNA repair protein, RadC family [Clostridium botulinum Ba4 str. 657] Length = 228 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+ GT++ V+ REI ++ + SII+ HNHPSG+P PS DI Sbjct: 132 LILNTKNIVTYIRDVFIGTLNSSIVHPREIFCEAIKKNGASIIICHNHPSGDPTPSKEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + + I + DHIIIG++ +VS K I Sbjct: 192 NITLRLKECGKLIGIDLLDHIIIGENKYVSMKEKGTI 228 >gi|238916926|ref|YP_002930443.1| DNA repair protein RadC [Eubacterium eligens ATCC 27750] gi|238872286|gb|ACR71996.1| DNA repair protein RadC [Eubacterium eligens ATCC 27750] Length = 230 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD LI D+V S GT V +REI + L+ A S++L+HNHPSGNP+PS D+ Sbjct: 133 VMLDNRCRLIRDKVLSVGTSTGSMVSVREIFKEALDNRAASVVLLHNHPSGNPSPSREDM 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++++ + I + DHI+IG +++ SFK ++ I Sbjct: 193 KVTRSVMEAGKIIGIELLDHIVIGDNSYFSFKQMQYI 229 >gi|158430296|pdb|2QLC|A Chain A, The Crystal Structure Of Dna Repair Protein Radc From Chlorobium Tepidum Tls gi|158430297|pdb|2QLC|B Chain B, The Crystal Structure Of Dna Repair Protein Radc From Chlorobium Tepidum Tls gi|158430298|pdb|2QLC|C Chain C, The Crystal Structure Of Dna Repair Protein Radc From Chlorobium Tepidum Tls gi|158430299|pdb|2QLC|D Chain D, The Crystal Structure Of Dna Repair Protein Radc From Chlorobium Tepidum Tls gi|158430300|pdb|2QLC|E Chain E, The Crystal Structure Of Dna Repair Protein Radc From Chlorobium Tepidum Tls gi|158430301|pdb|2QLC|F Chain F, The Crystal Structure Of Dna Repair Protein Radc From Chlorobium Tepidum Tls gi|158430302|pdb|2QLC|G Chain G, The Crystal Structure Of Dna Repair Protein Radc From Chlorobium Tepidum Tls gi|158430303|pdb|2QLC|H Chain H, The Crystal Structure Of Dna Repair Protein Radc From Chlorobium Tepidum Tls Length = 126 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL N ++ E + GT+ ++ REI + + SA SIILVHNHPSG+ PS+AD Sbjct: 30 LFLSTKNQILRHETITIGTLTASLIHPREIFKAAIRESAHSIILVHNHPSGDVQPSNADK 89 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + L I + DH+I+G + + SF+ ++ Sbjct: 90 QVTSILKKAGDLLQIELLDHVIVGNNDWFSFRDHALL 126 >gi|126653704|ref|ZP_01725623.1| DNA repair protein RadC [Bacillus sp. B14905] gi|126589741|gb|EAZ83876.1| DNA repair protein RadC [Bacillus sp. B14905] Length = 223 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I + G+++ V+ REI + ++ SA SII HNHPSG P PS DI Sbjct: 127 LFLNIKNQIIHRQTIFIGSLNASIVHPREIFREAVKRSAASIICAHNHPSGVPTPSAEDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ I + I + DH+IIG F+S K Sbjct: 187 DVTKRIEEAGYIMGIELIDHVIIGDHQFISLKEKGY 222 >gi|168179493|ref|ZP_02614157.1| DNA repair protein, RadC family [Clostridium botulinum NCTC 2916] gi|170755607|ref|YP_001782636.1| DNA repair protein RadC [Clostridium botulinum B1 str. Okra] gi|226950427|ref|YP_002805518.1| DNA repair protein RadC [Clostridium botulinum A2 str. Kyoto] gi|229485548|sp|B1IM02|Y1541_CLOBK RecName: Full=UPF0758 protein CLD_1541 gi|254764432|sp|C1FVY2|Y3399_CLOBJ RecName: Full=UPF0758 protein CLM_3399 gi|169120819|gb|ACA44655.1| DNA repair protein, RadC family [Clostridium botulinum B1 str. Okra] gi|182669777|gb|EDT81753.1| DNA repair protein, RadC family [Clostridium botulinum NCTC 2916] gi|226842668|gb|ACO85334.1| DNA repair protein, RadC family [Clostridium botulinum A2 str. Kyoto] Length = 228 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+ GT++ V+ REI ++ + SII+ HNHPSG+P PS DI Sbjct: 132 LILNTKNIVTYIRDVFIGTLNSSIVHPREIFCEAIKKNGASIIICHNHPSGDPTPSKEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + + I + DHIIIG++ +VS K I Sbjct: 192 NITLRLKECGKLIGIDLLDHIIIGENKYVSMKEKGTI 228 >gi|295677432|ref|YP_003605956.1| DNA repair protein RadC [Burkholderia sp. CCGE1002] gi|295437275|gb|ADG16445.1| DNA repair protein RadC [Burkholderia sp. CCGE1002] Length = 303 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 58/96 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E +RG++ + VY REIV+R L +A S+I+ HNHPSG PS +D Sbjct: 180 LFLDARHRLIRCEESARGSLTRMAVYPREIVRRALAANAASLIVAHNHPSGAVEPSASDC 239 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +TQ + L +++ + DH++IG D+ SF Sbjct: 240 RLTQTLRDALALVDVQLIDHLVIGADSVYSFARAGW 275 >gi|24373030|ref|NP_717072.1| RadC family DNA repair protein [Shewanella oneidensis MR-1] gi|24347195|gb|AAN54517.1|AE015589_12 DNA repair protein, RadC family [Shewanella oneidensis MR-1] Length = 157 Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + LI GTID VY RE+V+ L +A ++I HNHPSG PS AD Sbjct: 62 MMLDSQHRLIEFNEMFFGTIDSASVYPREVVKAVLLCNAAAVIFAHNHPSGCAEPSSADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I L +++ V DHI++ VSF ++ Sbjct: 122 RITERLIAALATIDVPVLDHIVVAD-TCVSFAERGLL 157 >gi|330428834|gb|AEC20168.1| DNA repair protein RadC [Pusillimonas sp. T7-7] Length = 225 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD LI E SRGT+ VY REI++ L+ A ++IL HNHPSG PS+AD+ Sbjct: 129 LYLDSQLRLITTEEISRGTLSQTSVYPREIIKSGLKHHAAALILAHNHPSGVAEPSEADL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ L ++I + DH+II VS I Sbjct: 189 ALTRHLKHALALVDIRLLDHLIITGTGAVSLAERGQI 225 >gi|163849132|ref|YP_001637176.1| DNA repair protein RadC [Chloroflexus aurantiacus J-10-fl] gi|222527106|ref|YP_002571577.1| DNA repair protein RadC [Chloroflexus sp. Y-400-fl] gi|189029391|sp|A9WAJ7|Y3603_CHLAA RecName: Full=UPF0758 protein Caur_3603 gi|254764431|sp|B9LEQ9|Y3887_CHLSY RecName: Full=UPF0758 protein Chy400_3887 gi|163670421|gb|ABY36787.1| DNA repair protein RadC [Chloroflexus aurantiacus J-10-fl] gi|222450985|gb|ACM55251.1| DNA repair protein RadC [Chloroflexus sp. Y-400-fl] Length = 229 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N + G+++ V + E+ + + ++ +II+VHNHPSG P PS DI Sbjct: 131 ILLDTKNRVQQITTVYIGSLNSANVRVGEVFKEAVRRNSAAIIVVHNHPSGEPTPSMEDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ +++ L+I V DH+IIG +VS + + Sbjct: 191 EITRQLVSAGRLLDIEVVDHLIIGNGRYVSLRERGL 226 >gi|221135334|ref|ZP_03561637.1| DNA repair protein RadC [Glaciecola sp. HTCC2999] Length = 213 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 55/96 (57%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L+ + + + GTI+ VY REIV+ L+ +A ++IL HNHPSG P PS ADI Sbjct: 117 LLNNQHEFLHYKELFSGTINAASVYPREIVKYALDYNAANVILAHNHPSGTPEPSQADIA 176 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I L+ +++ V DHI++G VS + Sbjct: 177 ITQRIRQALDLIDVQVLDHIVVGAGNAVSLAQRGCL 212 >gi|158929981|gb|ABW82962.1| DNA repair protein [uncultured bacterium pEAF66] Length = 224 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N L++ + RGT+ H VY RE+V+ L +A S++L HNHPSG P PS+AD+ Sbjct: 128 LFLDVKNRLLSSQEMFRGTLTHTSVYPREVVKAALARNAASVLLAHNHPSGAPEPSEADL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++++ L +++ V DH ++ SF + Sbjct: 188 ILTRSLVQALALVDVRVLDHFVVAGPHVHSFAEHGQL 224 >gi|88803500|ref|ZP_01119025.1| putative DNA repair protein [Polaribacter irgensii 23-P] gi|88780512|gb|EAR11692.1| putative DNA repair protein [Polaribacter irgensii 23-P] Length = 228 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N ++A S+G + V +R + +R LEL++ II+ HNHPSG PS AD Sbjct: 132 IYLNNSNKVVAKGQISKGGLTATLVDVRLVFKRALELASVGIIVCHNHPSGKLQPSAADK 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L+I + DH+II + A+ SF ++ Sbjct: 192 QLTLKIKEAGITLDIKLLDHLIITEKAYFSFADEGLL 228 >gi|311277441|ref|YP_003939672.1| DNA repair protein RadC [Enterobacter cloacae SCF1] gi|308746636|gb|ADO46388.1| DNA repair protein RadC [Enterobacter cloacae SCF1] Length = 221 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N ++ GT+ HV V+ REIV+ ++ +A ++IL HNHPSG+ PS +D Sbjct: 125 IFLDNQNRVLKHTRMFAGTLSHVEVHPREIVREAIKANAAALILAHNHPSGSAAPSRSDR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I + I V DH +IG+ SF I Sbjct: 185 MVTDKVIKCCQFMEIRVVDHFVIGRGESFSFAEHGWI 221 >gi|289432459|ref|YP_003462332.1| DNA repair protein RadC [Dehalococcoides sp. GT] gi|288946179|gb|ADC73876.1| DNA repair protein RadC [Dehalococcoides sp. GT] Length = 228 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI S G+++ V+ RE+ + L SA+S+IL HNHPSG+ PS DI Sbjct: 132 LMLDVKSRLIRVGHISVGSLEASVVHPREVFKEALSASASSVILAHNHPSGDTEPSHDDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++ + + I V DHIIIG +F S K ++ Sbjct: 192 GLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >gi|309795803|ref|ZP_07690218.1| DNA repair protein RadC family protein [Escherichia coli MS 145-7] gi|308120682|gb|EFO57944.1| DNA repair protein RadC family protein [Escherichia coli MS 145-7] Length = 156 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + L+ E+ GT+ H V+ RE+V+ L+ +A ++IL HNHPSG S D Sbjct: 61 MYLDNQHCLLEREILFIGTLSHTEVHPREVVKSALKHNAAAVILAHNHPSGTTEISQQDK 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MTQ I+ L + + V DH+++G + +SF L ++ Sbjct: 121 HMTQRIVKALALVEVRVLDHLVVG-NETISFAELGLL 156 >gi|312961083|ref|ZP_07775588.1| DNA repair protein RadC [Pseudomonas fluorescens WH6] gi|311284741|gb|EFQ63317.1| DNA repair protein RadC [Pseudomonas fluorescens WH6] Length = 164 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A EV G+ID VY R++++R L +A + I VHNHPSG PS AD Sbjct: 68 IFLDARHRVLAFEVLFHGSIDGASVYPRQVIKRSLVHNAAAAIFVHNHPSGCTEPSQADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L + + V DH I+G+ +S + Sbjct: 128 VLTARLKEALALIEVRVLDHFIVGEGRPLSLAEHGWL 164 >gi|254517357|ref|ZP_05129414.1| DNA repair protein RadC [gamma proteobacterium NOR5-3] gi|219674195|gb|EED30564.1| DNA repair protein RadC [gamma proteobacterium NOR5-3] Length = 177 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL + I+ E+Q RG+ID VY R IV+RCLEL+A ++ILVHNHPSG PS AD Sbjct: 81 LFLTAQHHAISFEIQFRGSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADR 140 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ V DH+I+ SF ++ Sbjct: 141 QITVRLQRALELIDVRVVDHLIVSAGDATSFAQAGLL 177 >gi|86143951|ref|ZP_01062319.1| putative DNA repair protein [Leeuwenhoekiella blandensis MED217] gi|85829658|gb|EAQ48121.1| putative DNA repair protein [Leeuwenhoekiella blandensis MED217] Length = 232 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ S+G + V +R +++ LE A S+IL HNHPSG PS AD Sbjct: 136 LYLNNSNKVLHKHQLSKGGMTGTLVDVRLVLKLALERGAVSLILAHNHPSGGLRPSQADK 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T + L+I V DH+II ++++ SF ++ Sbjct: 196 DITTKLKVAAASLDIKVLDHLIITENSYFSFADEGLL 232 >gi|307313278|ref|ZP_07592903.1| DNA repair protein RadC [Escherichia coli W] gi|306906961|gb|EFN37470.1| DNA repair protein RadC [Escherichia coli W] gi|315062961|gb|ADT77288.1| conserved hypothetical protein [Escherichia coli W] gi|323376447|gb|ADX48715.1| DNA repair protein RadC [Escherichia coli KO11] Length = 156 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + L+ E GT+ H V+ RE+V+ L+ +A ++IL HNHPSG S D Sbjct: 61 MYLDNQHCLLERETLFTGTLSHTEVHPREVVKSALKHNAAAVILAHNHPSGTTEISQQDK 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I L + + V DH+++GK VSF ++ Sbjct: 121 YVTQRIAKALALVEVRVLDHLVVGK-EVVSFAECGLL 156 >gi|310658699|ref|YP_003936420.1| DNA repair protein RadC-like protein [Clostridium sticklandii DSM 519] gi|308825477|emb|CBH21515.1| DNA repair protein radC homolog [Clostridium sticklandii] Length = 228 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N++I + S G+++ V+ RE+ ++ SA +IL+HNHPSG+P PS DI Sbjct: 132 VLLNTKNVIIGSKDISEGSLNASIVHPREVFLEAIKKSANKMILMHNHPSGDPTPSSEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ +I+ + I + DH+IIG F SFK I Sbjct: 192 NITKRLISAGQIVGIEILDHVIIGDGNFYSFKENGQI 228 >gi|46579604|ref|YP_010412.1| DNA repair protein RadC [Desulfovibrio vulgaris str. Hildenborough] gi|120602908|ref|YP_967308.1| DNA repair protein RadC [Desulfovibrio vulgaris DP4] gi|46449019|gb|AAS95671.1| DNA repair protein RadC [Desulfovibrio vulgaris str. Hildenborough] gi|120563137|gb|ABM28881.1| DNA repair protein RadC [Desulfovibrio vulgaris DP4] gi|311233408|gb|ADP86262.1| DNA repair protein RadC [Desulfovibrio vulgaris RCH1] Length = 225 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 56/96 (58%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD N LIA E ++GT++ +Y R++++ L SA+ IILVHNHP GNP PS D Sbjct: 130 LLDNQNRLIAWERATKGTVNASVIYPRDVLEMALRCSASGIILVHNHPGGNPVPSQPDFE 189 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L I + DH+I+ + S K ++ Sbjct: 190 VTRQLSRSALTLGIRLLDHVIVTDEDCYSLKEDGLL 225 >gi|332170536|gb|AEE19791.1| DNA repair protein RadC [Krokinobacter diaphorus 4H-3-7-5] Length = 237 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N ++ E S+G + V +R +++ +ELSA +IL HNHPSG PS AD Sbjct: 141 LFLNNSNKVLRKEQVSKGGLTGTLVDVRLVMKTAIELSAVGMILGHNHPSGTLKPSQADK 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + T L+I V DHII+ + + SF I+ Sbjct: 201 LLTAKLKTAAQSLDIQVLDHIIVTEKQYFSFADDGIL 237 >gi|291559003|emb|CBL37803.1| DNA replication and repair protein RadC [butyrate-producing bacterium SSC/2] Length = 242 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F + N +I + S GT++ RE+ L A S++++HNHPSG+P PS DI Sbjct: 146 IFFNGKNKVIKELTVSVGTVNQTVASPRELFLEALRCEAVSVLMIHNHPSGDPTPSRQDI 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L I + DHIIIG ++SF+ ++ Sbjct: 206 LTTKRMKEAGEFLGIPLCDHIIIGDQTYLSFREEHMM 242 >gi|262282816|ref|ZP_06060583.1| DNA repair protein RadC [Streptococcus sp. 2_1_36FAA] gi|262261068|gb|EEY79767.1| DNA repair protein RadC [Streptococcus sp. 2_1_36FAA] Length = 226 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G++ REI+ ++ ATSIILVHNHPSG PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSLTRSLAEPREILHYAIKHMATSIILVHNHPSGATRPSRDDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ I + ++ DH+I+G D++ S++ Sbjct: 189 QVTEKIKEACEMMGFVLLDHLIVGGDSYYSYREE 222 >gi|153814880|ref|ZP_01967548.1| hypothetical protein RUMTOR_01095 [Ruminococcus torques ATCC 27756] gi|317500393|ref|ZP_07958617.1| DNA repair protein RadC [Lachnospiraceae bacterium 8_1_57FAA] gi|331089600|ref|ZP_08338499.1| hypothetical protein HMPREF1025_02082 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847911|gb|EDK24829.1| hypothetical protein RUMTOR_01095 [Ruminococcus torques ATCC 27756] gi|316898148|gb|EFV20195.1| DNA repair protein RadC [Lachnospiraceae bacterium 8_1_57FAA] gi|330404968|gb|EGG84506.1| hypothetical protein HMPREF1025_02082 [Lachnospiraceae bacterium 3_1_46FAA] Length = 233 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 52/96 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ LI + S GTID V RE+ + +A IIL+HNHP G+P PS D+ Sbjct: 135 IFLNTRCRLIGECNVSEGTIDSALVSPRELFIEAFKRNAYGIILLHNHPGGDPTPSREDV 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ I L I + DHI+IG + FVS K Sbjct: 195 MITRRIYEAGELLGIRLFDHIVIGDNCFVSMKEKGF 230 >gi|311104314|ref|YP_003977167.1| DNA repair protein RadC 1 [Achromobacter xylosoxidans A8] gi|310759003|gb|ADP14452.1| DNA repair protein RadC 1 [Achromobacter xylosoxidans A8] Length = 164 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E RGTI+ VY R + QR LEL+A +++ H HPSG PS AD Sbjct: 68 VFLDSMHQVLAYEPLFRGTINSTSVYPRVVAQRVLELNAAAVVFSHQHPSGISEPSSADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHII+G+ A SF ++ Sbjct: 128 MLTQQLQVALALIDVRVLDHIIVGQGAPFSFAESGLL 164 >gi|89098269|ref|ZP_01171154.1| hypothetical protein B14911_10922 [Bacillus sp. NRRL B-14911] gi|89087126|gb|EAR66242.1| hypothetical protein B14911_10922 [Bacillus sp. NRRL B-14911] Length = 228 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 54/95 (56%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + LI+ + +GTID V+ RE+ + L SA II+ H HPSGN +PS DI + Sbjct: 134 LDTKHQLISRKEIYKGTIDAAIVHPREVFRFALNKSAAHIIVAHQHPSGNCSPSRDDIEV 193 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + I + DHII+G++ + S K + Sbjct: 194 TKRLRKVGEEIGIPLSDHIIVGRNKYFSMKKQGHL 228 >gi|170758657|ref|YP_001788315.1| DNA repair protein RadC [Clostridium botulinum A3 str. Loch Maree] gi|229485549|sp|B1KZT0|Y2387_CLOBM RecName: Full=UPF0758 protein CLK_2387 gi|169405646|gb|ACA54057.1| DNA repair protein, RadC family [Clostridium botulinum A3 str. Loch Maree] Length = 228 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+ GT++ V+ REI ++ + SII+ HNHPSG+P PS DI Sbjct: 132 LILNTKNIVTYIRDVFIGTLNSSIVHPREIFCEAIKKNGASIIICHNHPSGDPTPSKEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + + I + DHIIIG++ +VS K I Sbjct: 192 NITLRLKKCGKLIGIDLLDHIIIGENKYVSMKEKGTI 228 >gi|257465859|ref|ZP_05630170.1| DNA repair protein radC [Fusobacterium gonidiaformans ATCC 25563] gi|315917016|ref|ZP_07913256.1| DNA repair protein radC [Fusobacterium gonidiaformans ATCC 25563] gi|313690891|gb|EFS27726.1| DNA repair protein radC [Fusobacterium gonidiaformans ATCC 25563] Length = 227 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N L+ E +G+ID VY REI+++ L+ A S+I HNHPSGN PS DI Sbjct: 131 LFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGNTQPSRQDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++++ +HII+ K ++ SF ++ Sbjct: 191 ALTKEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL 227 >gi|209517442|ref|ZP_03266283.1| DNA repair protein RadC [Burkholderia sp. H160] gi|209502096|gb|EEA02111.1| DNA repair protein RadC [Burkholderia sp. H160] Length = 283 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E +RG++ + VY REIV+R L +A S+I+ HNHPSG PS AD Sbjct: 180 LFLDARHRLIRCEESARGSLTRMAVYPREIVRRALAANAASLIVAHNHPSGAVEPSAADC 239 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++TQ + L +++ + DH++IG D+ SF Sbjct: 240 HLTQTLRDALALVDVQLIDHLVIGADSVYSFARAGW 275 >gi|293374806|ref|ZP_06621110.1| DNA repair protein RadC family protein [Turicibacter sanguinis PC909] gi|292646564|gb|EFF64570.1| DNA repair protein RadC family protein [Turicibacter sanguinis PC909] Length = 149 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 47/96 (48%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L+ N V S GT++ V+ RE+ + + +A SI+ HNHPSG PS DI Sbjct: 54 CLNTKNEPTNISVVSVGTLNKAIVHPREVFKTAILSNAASIMAFHNHPSGETTPSQQDIQ 113 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L I + DH+IIG F S K + Sbjct: 114 LTNRLYEAGELLGIKLLDHLIIGDGTFTSLKEKGYL 149 >gi|193212294|ref|YP_001998247.1| DNA repair protein RadC [Chlorobaculum parvum NCIB 8327] gi|229485546|sp|B3QM94|Y627_CHLP8 RecName: Full=UPF0758 protein Cpar_0627 gi|193085771|gb|ACF11047.1| DNA repair protein RadC [Chlorobaculum parvum NCIB 8327] Length = 222 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +++ E + GT+ ++ REI + + SA SIILVHNHPSG+ PS+AD Sbjct: 126 LFLNTKNRILSHESVTVGTLTSSLIHPREIFKAAIRQSAHSIILVHNHPSGDVQPSNADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + + L I + DH+I+G D + SF+ ++ Sbjct: 186 QVTSILKKSGDLLQIALLDHVIVGNDDWFSFRDHSLL 222 >gi|257452349|ref|ZP_05617648.1| DNA repair protein radC [Fusobacterium sp. 3_1_5R] gi|317058892|ref|ZP_07923377.1| DNA repair protein radC [Fusobacterium sp. 3_1_5R] gi|313684568|gb|EFS21403.1| DNA repair protein radC [Fusobacterium sp. 3_1_5R] Length = 227 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N L+ E +G+ID VY REI+++ L+ A S+I HNHPSGN PS DI Sbjct: 131 LFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGNTQPSRQDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++++ +HII+ K ++ SF ++ Sbjct: 191 ALTKEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL 227 >gi|153853159|ref|ZP_01994568.1| hypothetical protein DORLON_00553 [Dorea longicatena DSM 13814] gi|149753945|gb|EDM63876.1| hypothetical protein DORLON_00553 [Dorea longicatena DSM 13814] Length = 230 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ L+ + S+GT++ + RE+ L+ +A SII++HNHPSG+P PS D+ Sbjct: 134 LMLNSKAKLLGETNISKGTVNASLITPRELFIEALQKNAVSIIILHNHPSGDPTPSREDM 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I+ + I + DHIIIG + ++SF+ ++ Sbjct: 194 LTTKRILDAGALIGIDLLDHIIIGNNCYMSFREEGML 230 >gi|78047921|ref|YP_364096.1| RadC family DNA repair protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036351|emb|CAJ24042.1| RadC family DNA repair protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 164 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ + ++A E +GTI V+ R I+QR LEL+A ++I H HPSG PS AD Sbjct: 68 VFLNNKHEVLAYEPMFKGTIHSATVHARPIMQRALELNAAAVIFSHQHPSGCTEPSSADC 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + T L +++ V DH+I+G+ SF ++ Sbjct: 128 AITQTLKTALALIDVRVLDHLIVGQGTPYSFAESDML 164 >gi|15606726|ref|NP_214106.1| DNA repair protein RadC [Aquifex aeolicus VF5] gi|6685835|sp|O67541|Y1610_AQUAE RecName: Full=UPF0758 protein aq_1610 gi|2983952|gb|AAC07500.1| DNA repair protein RadC [Aquifex aeolicus VF5] Length = 231 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+ EV + G ++ V ++I+ + ++LSA II+ HNHP G P+PS+ D+ Sbjct: 135 LYLDLSNRLLDWEVVAIGNVNTVFSKPKDILFKAVKLSANGIIIAHNHPQGEPSPSNEDL 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N T+ + L + DH+I+ + + SF+ ++ Sbjct: 195 NFTERLKKACELLGFELLDHLILSEGRYFSFREEGVL 231 >gi|298529740|ref|ZP_07017143.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1] gi|298511176|gb|EFI35079.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1] Length = 238 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + +D N LI E SRGT+D PV+ REI+ LE A+ +IL+HNHP G+P+PS D Sbjct: 142 IMVDNKNRLIDFEKMSRGTVDQAPVFPREILTVALEKRASGVILLHNHPGGDPHPSFQDR 201 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L + + DH+II +D+F SF+ + Sbjct: 202 ELTRKIREVSTALGVRLLDHVIISEDSFFSFQEHGFL 238 >gi|293375077|ref|ZP_06621368.1| DNA repair protein RadC family protein [Turicibacter sanguinis PC909] gi|292646319|gb|EFF64338.1| DNA repair protein RadC family protein [Turicibacter sanguinis PC909] Length = 149 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 49/96 (51%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L+ N + S G+++ V+ RE+ + + +A SI+ HNHPSG PS DI Sbjct: 54 CLNTKNEPTNITLVSVGSLNKAIVHPREVFKTAILSNAASIMAFHNHPSGETTPSQQDIQ 113 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I + DH+IIG +F S K + Sbjct: 114 LTKRLYEAGELLGIKLLDHLIIGDGSFTSLKEKGYL 149 >gi|257481766|ref|ZP_05635807.1| DNA repair protein RadC [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 219 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 35/91 (38%), Positives = 58/91 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ RGTI+ V+ R++V+R + +A S+IL HNHPSG PS +DI Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91 ++T+ + L +++ V DH+I+G +S Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSM 218 >gi|242278123|ref|YP_002990252.1| DNA repair protein RadC [Desulfovibrio salexigens DSM 2638] gi|242121017|gb|ACS78713.1| DNA repair protein RadC [Desulfovibrio salexigens DSM 2638] Length = 225 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 50/94 (53%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 + N +I E S GT+D VY RE+V L +A+ +IL HNHP G+P+PS D T Sbjct: 132 NNRNKVICWERLSEGTVDKTAVYPREVVALALRHNASGVILTHNHPGGDPSPSPEDTERT 191 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 I + I + DH+I+ D F SFK + Sbjct: 192 MEIAALCQDMEIRLLDHVIVTADRFHSFKEAGYL 225 >gi|169335849|ref|ZP_02863042.1| hypothetical protein ANASTE_02275 [Anaerofustis stercorihominis DSM 17244] gi|169258587|gb|EDS72553.1| hypothetical protein ANASTE_02275 [Anaerofustis stercorihominis DSM 17244] Length = 224 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N++I E+ S GTI+ V++RE+ + ++ +A SIIL HNHPSG+ PS D Sbjct: 128 ILLNTKNMVIETELISIGTINTSLVHVREVFRNAIKKNANSIILAHNHPSGDSTPSIEDE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I V DH+IIGKD + SF ++ Sbjct: 188 HLTKRLKDAGELIGIKVIDHVIIGKDNYFSFMEENML 224 >gi|238791279|ref|ZP_04634918.1| DNA repair protein [Yersinia intermedia ATCC 29909] gi|238729412|gb|EEQ20927.1| DNA repair protein [Yersinia intermedia ATCC 29909] Length = 152 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + ++A E RGT++ V +Y REIV+ L +A +IILVHNHPSG P PS AD Sbjct: 56 LLLDNQHRILAYEELFRGTLNAVSIYPREIVKLSLRYNAGAIILVHNHPSGEPEPSHADK 115 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + L L++ V DH+I+ VS ++ Sbjct: 116 EITNKLKSVLGLLDVQVLDHLIVAGTQVVSLAERGLV 152 >gi|298528608|ref|ZP_07016012.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1] gi|298512260|gb|EFI36162.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1] Length = 143 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Query: 2 FL-DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 FL D N ++ ++ S+GT+D PV+ REI++ L A+ +IL HNHP G+PNPS D Sbjct: 47 FLVDNKNHFLSKKLISKGTVDQAPVFPREILRYALLKQASGLILSHNHPGGDPNPSVQDR 106 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I L I + DH+I+ + SF+ ++ Sbjct: 107 EMTARIKKAAILLGIRLLDHVIVSRTGHYSFQEHGLL 143 >gi|153940602|ref|YP_001392279.1| DNA repair protein RadC [Clostridium botulinum F str. Langeland] gi|166218778|sp|A7GHL9|Y3057_CLOBL RecName: Full=UPF0758 protein CLI_3057 gi|152936498|gb|ABS41996.1| DNA repair protein, RadC family [Clostridium botulinum F str. Langeland] gi|295320272|gb|ADG00650.1| DNA repair protein, RadC family [Clostridium botulinum F str. 230613] Length = 228 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+ GT++ V+ REI ++ + SII+ HNHPSG+P PS DI Sbjct: 132 LILNTKNIVKYIRDVFIGTLNSSIVHPREIFCEAIKKNGASIIICHNHPSGDPTPSKEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + + I + DHIIIG++ +VS K I Sbjct: 192 NITLRLKECGKLIGIDLLDHIIIGENKYVSMKEKGTI 228 >gi|28189070|dbj|BAC56220.1| putative DNA repair protein [Streptococcus suis] Length = 226 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 56/94 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I+ + G+++ REI+ ++ ATSII+VHNHPSG+ PS D+ Sbjct: 129 LYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+N+ + L +++ DH+I+G + SF+ Sbjct: 189 LFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222 >gi|224370717|ref|YP_002604881.1| RadC3 [Desulfobacterium autotrophicum HRM2] gi|223693434|gb|ACN16717.1| RadC3 [Desulfobacterium autotrophicum HRM2] Length = 279 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N ++A E+ G++ VY RE++ + LE A ++I HNHPSG +PS D+ Sbjct: 171 IFLDAKNRVLASEILFEGSLSSSAVYPREVIAKALEHRAAALIFAHNHPSGETSPSPEDL 230 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I VH+H+I G + F SF II Sbjct: 231 AITRRLFFALAHAGITVHEHLITGGERFYSFADQGII 267 >gi|225011591|ref|ZP_03702029.1| DNA repair protein RadC [Flavobacteria bacterium MS024-2A] gi|225004094|gb|EEG42066.1| DNA repair protein RadC [Flavobacteria bacterium MS024-2A] Length = 232 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ N L+ S+G I V +R +R E+ AT +IL HNHPSG PS +D Sbjct: 136 LYLNQSNRLLEKYRLSKGGITQTTVDLRLAFKRAFEVGATGLILAHNHPSGGLTPSSSDE 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +++ + DH+I+ K + SF ++ Sbjct: 196 QITRKFKLAAASVDLRILDHLIVSKKGYFSFADEGLL 232 >gi|15644305|ref|NP_229357.1| DNA repair protein RadC [Thermotoga maritima MSB8] gi|6685843|sp|Q9X1P3|Y1557_THEMA RecName: Full=UPF0758 protein TM_1557 gi|4982124|gb|AAD36623.1|AE001801_10 DNA repair protein [Thermotoga maritima MSB8] Length = 222 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 52/95 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD +I + + GT D ++ R++ + + +A+ +I+VHNHPSG+P PS D Sbjct: 126 ICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPTPSKEDR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + L + + DH+I+ + + SF+ Sbjct: 186 LITERLKQAGEILGVSLVDHVIVSRRGYFSFREEG 220 >gi|108804367|ref|YP_644304.1| DNA repair protein RadC [Rubrobacter xylanophilus DSM 9941] gi|122975977|sp|Q1AVT6|Y1530_RUBXD RecName: Full=UPF0758 protein Rxyl_1530 gi|108765610|gb|ABG04492.1| DNA repair protein RadC [Rubrobacter xylanophilus DSM 9941] Length = 227 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I S GT+ V+ RE+ + + SA S++L HNHPSG PS D Sbjct: 132 VLLNTKNEVIEAPTISVGTLSSSLVHPREVFKPAIRASAASVVLAHNHPSGRVEPSREDR 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + I V DH+I+G + + S K ++ Sbjct: 192 EVTGRVAEAGGIIGIEVLDHVIVG-EGYFSMKEHGML 227 >gi|229552057|ref|ZP_04440782.1| DNA repair protein RadC [Lactobacillus rhamnosus LMS2-1] gi|229314574|gb|EEN80547.1| DNA repair protein RadC [Lactobacillus rhamnosus LMS2-1] Length = 236 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 37/92 (40%), Positives = 58/92 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +I +++ + GT+D R + + L+LSAT++I+VHNHPSG+P+PS AD Sbjct: 138 LFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADR 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 + T L + + DH+IIG+ ++ SF Sbjct: 198 DTTTRFQLAAALLGMHLLDHLIIGRQSYYSFA 229 >gi|78042658|ref|YP_359204.1| DNA repair protein RadC [Carboxydothermus hydrogenoformans Z-2901] gi|123577004|sp|Q3AF80|Y341_CARHZ RecName: Full=UPF0758 protein CHY_0341 gi|77994773|gb|ABB13672.1| DNA repair protein RadC [Carboxydothermus hydrogenoformans Z-2901] Length = 226 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N L + + + G ++H V +I + +++ A ++I+ HNHPSG+P PS DI Sbjct: 130 LYLNTKNQLCGENIVAIGGVNHAGVSPGDIFREAVKIGAYAVIIAHNHPSGDPTPSKEDI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 + T + L I + DHII+G++ ++S K R+ Sbjct: 190 DFTGRVKKASEILGIKLLDHIILGENKYISMKAERL 225 >gi|154253862|ref|YP_001414686.1| DNA repair protein RadC [Parvibaculum lavamentivorans DS-1] gi|154157812|gb|ABS65029.1| DNA repair protein RadC [Parvibaculum lavamentivorans DS-1] Length = 164 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F+D + ++A E RGTI+ V+ R IVQR LEL+A ++IL H HPSG PS AD Sbjct: 68 VFMDSLHQVLAYEPMFRGTINSATVHARVIVQRALELNAAAVILSHQHPSGATEPSSADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHII+G+ SF ++ Sbjct: 128 ALTQQLQAALALIDVRVLDHIIVGQGIPYSFAEHGLL 164 >gi|295094836|emb|CBK83927.1| DNA replication and repair protein RadC [Coprococcus sp. ART55/1] Length = 242 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L D + LI D S GT++ + RE+ L A IILVHNHPSG+P PS DI Sbjct: 146 LMFDAKHKLIKDVRISEGTVNSSMLSPREVFVEALRYDAVYIILVHNHPSGDPTPSGQDI 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DHII+G + +VS I+ Sbjct: 206 DITREMDRAGELIGIELSDHIILGNNCYVSLAERGIL 242 >gi|253751831|ref|YP_003024972.1| DNA repair protein RadC [Streptococcus suis SC84] gi|253753654|ref|YP_003026795.1| DNA repair protein RadC [Streptococcus suis P1/7] gi|253755465|ref|YP_003028605.1| DNA repair protein RadC [Streptococcus suis BM407] gi|18253151|dbj|BAB83962.1| putative DNA repair protein [Streptococcus suis] gi|251816120|emb|CAZ51743.1| DNA repair protein RadC [Streptococcus suis SC84] gi|251817929|emb|CAZ55707.1| DNA repair protein RadC [Streptococcus suis BM407] gi|251819900|emb|CAR45944.1| DNA repair protein RadC [Streptococcus suis P1/7] gi|292558401|gb|ADE31402.1| putative DNA repair protein [Streptococcus suis GZ1] gi|319758183|gb|ADV70125.1| DNA repair protein RadC [Streptococcus suis JS14] Length = 226 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 56/94 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I+ + G+++ REI+ ++ ATSII+VHNHPSG+ PS D+ Sbjct: 129 LYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+N+ + L +++ DH+I+G + SF+ Sbjct: 189 LFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222 >gi|148270365|ref|YP_001244825.1| DNA repair protein RadC [Thermotoga petrophila RKU-1] gi|281412671|ref|YP_003346750.1| DNA repair protein RadC [Thermotoga naphthophila RKU-10] gi|166218798|sp|A5IM26|Y1235_THEP1 RecName: Full=UPF0758 protein Tpet_1235 gi|147735909|gb|ABQ47249.1| DNA repair protein RadC [Thermotoga petrophila RKU-1] gi|281373774|gb|ADA67336.1| DNA repair protein RadC [Thermotoga naphthophila RKU-10] Length = 222 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 52/95 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD +I + + GT D ++ R++ + + +A+ +I+VHNHPSG+P PS D Sbjct: 126 ICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPTPSKEDR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + L + + DH+I+ + + SF+ Sbjct: 186 LITERLKQAGEILGVSLVDHVIVSRRGYFSFREEG 220 >gi|70726267|ref|YP_253181.1| hypothetical protein SH1266 [Staphylococcus haemolyticus JCSC1435] gi|123660411|sp|Q4L700|Y1266_STAHJ RecName: Full=UPF0758 protein SH1266 gi|68446991|dbj|BAE04575.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 228 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 52/96 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+I +E +GT++ ++ RE+ + + S+ +II++HNHPSG+ PS DI Sbjct: 128 LLLNSKNIVIKEETIYKGTLNSSVIHPREVFKAAIRASSNAIIVLHNHPSGDVTPSKEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I V DHIIIG + S Sbjct: 188 ETTIRLKECGELLGIQVLDHIIIGDQKYASLVEEGY 223 >gi|28189083|dbj|BAC56230.1| putative DNA repair protein [Streptococcus suis] Length = 226 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 56/94 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I E G+++ REI+ ++ ATS+I+VHNHPSG+ +PS D+ Sbjct: 129 LYLNTQNQIIKQETIFIGSVNRSIAEPREILHHAIKCMATSVIIVHNHPSGSVHPSKNDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+N+ + L +++ DH+I+G + SF+ Sbjct: 189 LFTENLKQSCEVLGLVLLDHLIVGNKNYYSFREE 222 >gi|260881538|ref|ZP_05404673.2| DNA repair protein RadC [Mitsuokella multacida DSM 20544] gi|260848721|gb|EEX68728.1| DNA repair protein RadC [Mitsuokella multacida DSM 20544] Length = 226 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N ++ S G++ V+ RE+ + +A S+ILVHNHPSG+PNPS D+ Sbjct: 129 LLLNTKNHILGLRDVSIGSLSASVVHPREVFAMAIRYAAASMILVHNHPSGDPNPSREDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L+I V DHII+G + F+S K +I Sbjct: 189 AITDRLVKAGRILDIPVLDHIILGDNRFLSLKEKGMI 225 >gi|28189075|dbj|BAC56224.1| putative DNA repair protein [Streptococcus suis] Length = 226 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 56/94 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I E G+++ REI+ ++ ATS+I+VHNHPSG+ +PS D+ Sbjct: 129 LYLNTQNQIIKQETIFIGSVNRSIAEPREILHHAIKCMATSVIIVHNHPSGSVHPSKNDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+N+ + L +++ DH+I+G + SF+ Sbjct: 189 LFTENLKQSCEVLGLVLLDHLIVGNKNYYSFREE 222 >gi|170289009|ref|YP_001739247.1| DNA repair protein RadC [Thermotoga sp. RQ2] gi|170176512|gb|ACB09564.1| DNA repair protein RadC [Thermotoga sp. RQ2] Length = 215 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 52/95 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD +I + + GT D ++ R++ + + +A+ +I+VHNHPSG+P PS D Sbjct: 119 ICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPTPSKEDR 178 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + L + + DH+I+ + + SF+ Sbjct: 179 LITERLKQAGEILGVSLVDHVIVSRRGYFSFREEG 213 >gi|28189079|dbj|BAC56227.1| putative DNA repair protein [Streptococcus suis] Length = 226 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 56/94 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I E G+++ REI+ ++ ATS+I+VHNHPSG+ +PS D+ Sbjct: 129 LYLNTQNQIIKQETIFIGSVNRSIAEPREILHHAIKCMATSVIIVHNHPSGSVHPSKNDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+N+ + L +++ DH+I+G + SF+ Sbjct: 189 LFTENLKQSCEVLGLVLLDHLIVGNKNYYSFREE 222 >gi|297618163|ref|YP_003703322.1| DNA repair protein RadC [Syntrophothermus lipocalidus DSM 12680] gi|297146000|gb|ADI02757.1| DNA repair protein RadC [Syntrophothermus lipocalidus DSM 12680] Length = 166 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N + A +V S G++ V+ RE+ + + S+ S+I +HNHPSG+P PS DI Sbjct: 70 LYLNSGNQVTAAQVVSIGSLSSTVVHPREVFKTAILTSSMSVIAIHNHPSGDPEPSSEDI 129 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I V DHI+IG F S +G++ I Sbjct: 130 AVTKQLVEAGKILGIKVLDHIVIGNKRFWSMRGMKQI 166 >gi|254518121|ref|ZP_05130177.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA] gi|226911870|gb|EEH97071.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA] Length = 152 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N + S G+++ V+ RE+ + + ++ +II+ HNHPSG+ PS DI Sbjct: 55 VCLDNKNQPTSINTVSVGSLNSSIVHPREVFKVAILSNSANIIVYHNHPSGDVTPSKEDI 114 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKD-AFVSFKGLR 95 N+T+ + L I + DHII+G + ++ SFK Sbjct: 115 NITERLKEAGKILGIELIDHIIVGSNSSYYSFKEKG 150 >gi|256819754|ref|YP_003141033.1| DNA repair protein RadC [Capnocytophaga ochracea DSM 7271] gi|256581337|gb|ACU92472.1| DNA repair protein RadC [Capnocytophaga ochracea DSM 7271] Length = 225 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I G I H V +R + + LE A ++ILVHNHPSG+ PS DI Sbjct: 129 LYLNSTNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGSTTPSKEDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +TQ + T L+I + DH+I+ + ++SF R+ Sbjct: 189 ELTQRVKTAGEMLDIKLLDHVIVTEKEYLSFLDERL 224 >gi|237747755|ref|ZP_04578235.1| DNA repair protein radC [Oxalobacter formigenes OXCC13] gi|229379117|gb|EEO29208.1| DNA repair protein radC [Oxalobacter formigenes OXCC13] Length = 224 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI RGT+ VY RE+V+ L ++ S+I HNHPSG +PS+AD Sbjct: 128 LHLDIKNKLIECSEMFRGTLSQTSVYPREVVKAALANNSASVIFAHNHPSGKADPSNADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L ++I V DHII+ SF + Sbjct: 188 TLTHALKQALGLVDIRVLDHIIVAGKNTYSFAEYGFL 224 >gi|222142629|ref|YP_002559384.1| hypothetical protein MCCL_plsB0053 [Macrococcus caseolyticus JCSC5402] gi|222121398|dbj|BAH18731.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 150 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 47/94 (50%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N + GTI+ P++ RE+ Q + S SIIL H HPS +P PS D Sbjct: 56 LNTKNEITFVYTVFIGTINMSPIHPREVFQVAILNSCASIILAHCHPSDDPTPSSEDREA 115 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ L I V DHII+ + ++ SF+ + Sbjct: 116 TKRFEECGELLGIPVLDHIIVTESSYFSFRENNL 149 >gi|107102082|ref|ZP_01366000.1| hypothetical protein PaerPA_01003131 [Pseudomonas aeruginosa PACS2] gi|134095214|ref|YP_001100289.1| RadC family DNA repair protein [Herminiimonas arsenicoxydans] gi|133739117|emb|CAL62166.1| putative DNA repair protein RadC [Herminiimonas arsenicoxydans] Length = 164 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E RGTI+ VY R +VQR LEL A +++ H HPSG PS AD Sbjct: 68 VFLDSMHQVLAYEPMFRGTINSTAVYPRVVVQRVLELKAAAVVFAHQHPSGVTEPSSADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHII+G+ SF ++ Sbjct: 128 ALTQQLQAALALIDVRVLDHIIVGQGIPYSFAEHSLL 164 >gi|330971404|gb|EGH71470.1| DNA repair protein RadC [Pseudomonas syringae pv. aceris str. M302273PT] Length = 162 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + ++ E G+ID VY REIV R L +A ++I HNHPSG PS AD Sbjct: 66 VCLDARHRTLSFEKVFFGSIDSASVYPREIVIRALACNAAAVIFAHNHPSGCAEPSQADR 125 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + L + + V DH ++G+ VS + + Sbjct: 126 NLTAQLKNALALVEVRVLDHFVVGEGKPVSLAEMGWL 162 >gi|291546142|emb|CBL19250.1| DNA replication and repair protein RadC [Ruminococcus sp. SR1/5] Length = 235 Score = 121 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 60/96 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD HN L +++ SRGT++ + RE+ ++ A ++ILVHNHP G+P+PS AD+ Sbjct: 135 MMLDGHNHLSGEQLLSRGTVNATLITPREVFVEAVKYRAVNLILVHNHPGGDPSPSQADL 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ I L I + DHIIIG +VSF+ I Sbjct: 195 DVTERIYHCGELLGIHLLDHIIIGDHRYVSFREKGI 230 >gi|225419747|ref|ZP_03762050.1| hypothetical protein CLOSTASPAR_06085 [Clostridium asparagiforme DSM 15981] gi|225041614|gb|EEG51860.1| hypothetical protein CLOSTASPAR_06085 [Clostridium asparagiforme DSM 15981] Length = 231 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD L+ D + SRGT++ + RE++ L A +++LVHNHPSG+P PS DI Sbjct: 135 MFLDTKQALLKDVLLSRGTVNASVLSPREVLIEALRCRAVTMVLVHNHPSGDPTPSREDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ I + I + DHI+IG ++SF+ ++ Sbjct: 195 NLTRRICEAGGLVGIPLIDHIVIGDLRYLSFREQNLL 231 >gi|33152085|ref|NP_873438.1| DNA repair protein [Haemophilus ducreyi 35000HP] gi|33148307|gb|AAP95827.1| conserved possible DNA repair protein [Haemophilus ducreyi 35000HP] Length = 157 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LF D N LI E GTI+ ++ REIV++ LEL+++++IL HNHPSG PS +D Sbjct: 61 LFWDTQNRLIRFEKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDK 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T I +++ V DHII+ SF +++ Sbjct: 121 QTTAKIKQACQLIDVNVLDHIIVSATDTYSFCMHQLM 157 >gi|119897428|ref|YP_932641.1| DNA repair protein RadC [Azoarcus sp. BH72] gi|166218773|sp|A1K4J9|Y1137_AZOSB RecName: Full=UPF0758 protein azo1137 gi|119669841|emb|CAL93754.1| DNA repair protein radC homolog [Azoarcus sp. BH72] Length = 225 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI RGT+ VY RE+V+ L+ +A ++I HNHPSG PS AD Sbjct: 128 LLLDARNTLIDAVDLFRGTLTQTSVYPREVVKLALDRNAAAVIFAHNHPSGAAEPSSADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97 +T+++ L ++I V DH ++ SF +I Sbjct: 188 QLTRHLKDALALVDIRVLDHFVVPAHGKPTSFAERGLI 225 >gi|225010502|ref|ZP_03700973.1| DNA repair protein RadC [Flavobacteria bacterium MS024-3C] gi|225005331|gb|EEG43282.1| DNA repair protein RadC [Flavobacteria bacterium MS024-3C] Length = 231 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N+LI + +G V IR ++Q+ + AT++I+ HNHP+GN PS +D Sbjct: 135 LYLDNSNVLIERSLLGKGGFTATVVDIRLVLQQAIRWGATAMIVAHNHPTGNLKPSHSDK 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+I + DHII+GK+ + SF ++ Sbjct: 195 ALTQKLKEAAKVLDIKLLDHIIVGKNEYFSFADQNLL 231 >gi|182419744|ref|ZP_02950984.1| DNA repair protein [Clostridium butyricum 5521] gi|237666375|ref|ZP_04526360.1| DNA repair protein RadC [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376292|gb|EDT73874.1| DNA repair protein [Clostridium butyricum 5521] gi|237657574|gb|EEP55129.1| DNA repair protein RadC [Clostridium butyricum E4 str. BoNT E BL5262] Length = 229 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 55/95 (57%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L N +I + G++++ V+ REI +R + + S+I+ HNHPSG+P PS DIN+ Sbjct: 135 LSTKNTIIDAKDVFIGSLNNSIVHPREIFKRAITSHSASVIICHNHPSGDPTPSREDINI 194 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T I + I + DHIIIG + FVS K +I Sbjct: 195 TLRIKECGKIIGIPLIDHIIIGNNTFVSLKEKGLI 229 >gi|223932335|ref|ZP_03624338.1| DNA repair protein RadC [Streptococcus suis 89/1591] gi|302023854|ref|ZP_07249065.1| DNA repair protein RadC [Streptococcus suis 05HAS68] gi|28189065|dbj|BAC56216.1| putative DNA repair protein [Streptococcus suis] gi|223899016|gb|EEF65374.1| DNA repair protein RadC [Streptococcus suis 89/1591] Length = 226 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 56/94 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I+ + G+++ REI+ ++ ATSII+VHNHPSG+ PS D+ Sbjct: 129 LYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+N+ + L +++ DH+I+G + SF+ Sbjct: 189 LFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222 >gi|269926735|ref|YP_003323358.1| DNA repair protein RadC [Thermobaculum terrenum ATCC BAA-798] gi|269790395|gb|ACZ42536.1| DNA repair protein RadC [Thermobaculum terrenum ATCC BAA-798] Length = 234 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 55/94 (58%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N ++A +G ++ + ++ + + +A SIIL HNHPSG+P PS D+ Sbjct: 138 LNTKNQILAITEVYKGGLNSALIRPADVFKPAVRNNAASIILAHNHPSGDPTPSSEDVRT 197 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+++I L+I V DHII+G++++ S + + Sbjct: 198 TESLIEAGKLLDIEVLDHIIVGRNSYTSMRRRHL 231 >gi|254520230|ref|ZP_05132286.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA] gi|226913979|gb|EEH99180.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA] Length = 229 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N +I + +G+++ V+ REI + L+ S++SII+ HNHPSG+P PS DI Sbjct: 133 IMLDTKNNIIGIKDVFKGSLNTSIVHPREIFKEALKKSSSSIIICHNHPSGDPTPSKEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + + + + DH+IIGK FVS K II Sbjct: 193 NITLRLKECSKIIGVDLLDHLIIGKGKFVSLKEKGII 229 >gi|119503524|ref|ZP_01625607.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2080] gi|119460586|gb|EAW41678.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2080] Length = 223 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 56/96 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD L+A GT++ PVY REIV L++ A++II+ HNHPSG PS ADI Sbjct: 124 LFLDTQRQLLACRDMFFGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCLAPSVADI 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T + L ++I + DH+I+ + ++S + Sbjct: 184 QLTDRLRRALGLIDIDLLDHLIVAQGRYLSMASEGL 219 >gi|73748411|ref|YP_307650.1| RadC family DNA repair protein [Dehalococcoides sp. CBDB1] gi|73660127|emb|CAI82734.1| DNA repair protein, RadC family [Dehalococcoides sp. CBDB1] Length = 219 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI S G+++ V+ RE+ + L SA +IL HNHPSG+ PS DI Sbjct: 123 LMLDVKSRLIRVGHISVGSLEASVVHPREVFKEALSASAAFVILAHNHPSGDTEPSHDDI 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++ + + I V DHIIIG +F S K ++ Sbjct: 183 GLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 219 >gi|239828412|ref|YP_002951036.1| DNA repair protein RadC [Geobacillus sp. WCH70] gi|239808705|gb|ACS25770.1| DNA repair protein RadC [Geobacillus sp. WCH70] Length = 169 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N A + G+++ V+ RE+ + + ++ SII+ HNHPS +P PS DI Sbjct: 73 VCLDTKNQPTAINICHIGSLNSSIVHPREVFKSAILSNSASIIVAHNHPSSDPTPSREDI 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I + DH+I+ ++ FVS K I Sbjct: 133 EVTKRLVEAGRIVGIELLDHLIVCEEKFVSLKEKGYI 169 >gi|325842730|ref|ZP_08167765.1| putative DNA repair protein RadC [Turicibacter sp. HGF1] gi|325489530|gb|EGC91895.1| putative DNA repair protein RadC [Turicibacter sp. HGF1] Length = 149 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 51/96 (53%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L+ N V S G+++ V+ RE+ + + +A SII HNHPSG PSD DI Sbjct: 54 CLNTKNEPTNITVVSVGSLNKAIVHPREVFKTAILSNAASIIAFHNHPSGETTPSDQDIQ 113 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L I + DH+IIG +F+S K + Sbjct: 114 LTHRLVEAGELLGIKLLDHLIIGDGSFMSLKEKGYL 149 >gi|167630773|ref|YP_001681272.1| DNA repair protein radc [Heliobacterium modesticaldum Ice1] gi|167593513|gb|ABZ85261.1| DNA repair protein radc [Heliobacterium modesticaldum Ice1] Length = 223 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 56/95 (58%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +++ E S G++ V+ RE+ + + SA +++L+HNHPSG+P PS D + Sbjct: 129 LNTKNQVLSIEDISVGSLSSSIVHPRELFKVLIRKSAAAVVLIHNHPSGDPTPSREDREI 188 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I+ L I + DH+IIG + + S K L + Sbjct: 189 TRRIVEAGRILGIEILDHVIIGDNRYSSLKELGYV 223 >gi|169825547|ref|YP_001695722.1| DNA repair protein radC-like protein [Lysinibacillus sphaericus C3-41] gi|168994824|gb|ACA42363.1| DNA repair protein radC-like protein [Lysinibacillus sphaericus C3-41] Length = 204 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I E G+++ REI++ L+ SA II +HNH SG+ PS D+ Sbjct: 108 LFLDTRSRVIKKETIFIGSLNSSIASPREIMRLALKYSAAGIICLHNHCSGDSEPSMQDL 167 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + + + DHI+IG + F S + ++ Sbjct: 168 EVTRRLFEAGDLMGVELIDHIVIGNNEFTSIRENNLL 204 >gi|304395596|ref|ZP_07377479.1| DNA repair protein RadC [Pantoea sp. aB] gi|304356890|gb|EFM21254.1| DNA repair protein RadC [Pantoea sp. aB] Length = 155 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N L+A E G+I ++ RE+V+ L +A + I HNHPSG PSDAD Sbjct: 59 VFLDNQNRLLAHETLFHGSITSTEIHPREVVKAALRHNAAAAIFAHNHPSGYAEPSDADR 118 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L + + V DH+I+G VSF + Sbjct: 119 RITERLKNALALVEVRVLDHLIVGSKEIVSFAERGWL 155 >gi|219847704|ref|YP_002462137.1| DNA repair protein RadC [Chloroflexus aggregans DSM 9485] gi|254764430|sp|B8G568|Y777_CHLAD RecName: Full=UPF0758 protein Cagg_0777 gi|219541963|gb|ACL23701.1| DNA repair protein RadC [Chloroflexus aggregans DSM 9485] Length = 229 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + + G+++ + I E+ + + ++ +II+VHNHPSG PS DI Sbjct: 131 VLLDTKHRVQQINTVYIGSLNSATIRIGEVFKEAVRRNSAAIIVVHNHPSGEATPSPEDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ ++ L+I V DH+IIG+ +VS + I Sbjct: 191 QVTRQLVAAGRLLDIEVLDHLIIGRGQYVSLRERGI 226 >gi|260061882|ref|YP_003194962.1| putative DNA repair protein [Robiginitalea biformata HTCC2501] gi|88786015|gb|EAR17184.1| putative DNA repair protein [Robiginitalea biformata HTCC2501] Length = 242 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +++ S+G + V +R ++++ LEL A S++L HNHPSGN PS AD Sbjct: 146 LYLNNANGVLSRFQLSKGGLTGTLVDVRLLLRKALELHAVSLVLAHNHPSGNLQPSKADR 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I ++I V DH+I+G A+ SF +++ Sbjct: 206 QITRKIEKAARSMDIRVLDHLILGGTAYFSFADEQLL 242 >gi|90408646|ref|ZP_01216799.1| DNA repair protein RadC [Psychromonas sp. CNPT3] gi|90310253|gb|EAS38385.1| DNA repair protein RadC [Psychromonas sp. CNPT3] Length = 157 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 63/97 (64%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ + LI + GTID +Y RE+++ L+L+A+++IL HNHPSG+ PSDADI Sbjct: 62 MFLNSRHQLIEYKEIFHGTIDSAHIYPREMLKAVLKLNASTVILAHNHPSGSSVPSDADI 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DH+I+G+ A SF ++ Sbjct: 122 AITQRLTKALELIDVRVLDHVIVGETA-TSFAEKGLL 157 >gi|146320931|ref|YP_001200642.1| DNA repair protein RadC [Streptococcus suis 98HAH33] gi|229485571|sp|A4W1K3|Y1084_STRS2 RecName: Full=UPF0758 protein SSU98_1084 gi|145691737|gb|ABP92242.1| putative DNA repair protein [Streptococcus suis 98HAH33] Length = 246 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 56/94 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I+ + G+++ REI+ ++ ATSII+VHNHPSG+ PS D+ Sbjct: 129 LYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+N+ + L +++ DH+I+G + SF+ Sbjct: 189 LFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222 >gi|170693582|ref|ZP_02884740.1| DNA repair protein RadC [Burkholderia graminis C4D1M] gi|170141364|gb|EDT09534.1| DNA repair protein RadC [Burkholderia graminis C4D1M] Length = 254 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 60/96 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E +RGT+ + VY REIV+R L L+A S+I+ HNHPSG PS +D Sbjct: 158 LFLDARHRLIRSEESARGTLTRMAVYPREIVRRALALNAASLIVAHNHPSGAVQPSASDC 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ + L +++ + DH++IG D+ SF Sbjct: 218 SLTRTLREALALIDVQLVDHLVIGADSVYSFARAGW 253 >gi|296313679|ref|ZP_06863620.1| DNA repair protein RadC [Neisseria polysaccharea ATCC 43768] gi|296839740|gb|EFH23678.1| DNA repair protein RadC [Neisseria polysaccharea ATCC 43768] Length = 225 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ +YIREIV+ L+ A S+I+ HNHP G+P PS DI Sbjct: 128 LLLNRQNQLIAVRELSRGTVTENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + ++ +++ + DH I+ + SF+ L ++ Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSRSVCSFRQLGLM 224 >gi|160871642|ref|ZP_02061774.1| DNA repair protein RadC [Rickettsiella grylli] gi|159120441|gb|EDP45779.1| DNA repair protein RadC [Rickettsiella grylli] Length = 224 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + I + G+I+ VY RE++++ + +A ++IL HNHPSGN PSDAD Sbjct: 128 LFLDNTHRFIFFKELFHGSINEATVYPRELIRQVYQHNAAAVILAHNHPSGNAKPSDADK 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I T L +++ + DHIIIG SF ++ Sbjct: 188 RLTQEIKTILTAIDVRLLDHIIIGSGCITSFAAQGLL 224 >gi|258508259|ref|YP_003171010.1| DNA repair protein radC [Lactobacillus rhamnosus GG] gi|258539471|ref|YP_003173970.1| DNA repair protein radC [Lactobacillus rhamnosus Lc 705] gi|257148186|emb|CAR87159.1| DNA repair protein radC [Lactobacillus rhamnosus GG] gi|257151147|emb|CAR90119.1| DNA repair protein radC [Lactobacillus rhamnosus Lc 705] gi|259649577|dbj|BAI41739.1| DNA repair protein [Lactobacillus rhamnosus GG] Length = 222 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 37/92 (40%), Positives = 58/92 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +I +++ + GT+D R + + L+LSAT++I+VHNHPSG+P+PS AD Sbjct: 124 LFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADR 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 + T L + + DH+IIG+ ++ SF Sbjct: 184 DTTTRFQLAAALLGMHLLDHLIIGRQSYYSFA 215 >gi|295397226|ref|ZP_06807325.1| DNA repair protein RadC [Aerococcus viridans ATCC 11563] gi|294974535|gb|EFG50263.1| DNA repair protein RadC [Aerococcus viridans ATCC 11563] Length = 241 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ ++ G+++ + REI + + SA II+ HNHPSGNP+PS ADI Sbjct: 144 LYLNTKNQIVKEKTIFVGSLNASVAHPREIFKEGVRASAARIIVAHNHPSGNPSPSQADI 203 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 N T+ + + + I + DHII+G DAF+S + I Sbjct: 204 NFTRRLAEVGDLIGIEILDHIIVGGDAFLSLQEYGI 239 >gi|260890567|ref|ZP_05901830.1| DNA repair protein RadC [Leptotrichia hofstadii F0254] gi|260859809|gb|EEX74309.1| DNA repair protein RadC [Leptotrichia hofstadii F0254] Length = 239 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 63/97 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N L+ +E RGTID VYIRE++++ LE +A S+ILVHNHP+G+ PSD+DI Sbjct: 143 LFLNTQNELLKEEELFRGTIDRSTVYIRELIKKILEYNAKSVILVHNHPAGSLRPSDSDI 202 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I + DH+II + + SF I+ Sbjct: 203 RLTKKVKEVFESLEIRLLDHLIISEKGYFSFLEGGIL 239 >gi|325479032|gb|EGC82133.1| DNA repair protein RadC [Anaerococcus prevotii ACS-065-V-Col13] Length = 227 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 59/95 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N++I+ E S G + V RE+ + ++ SA S+IL+HNHPSGNP PS D Sbjct: 131 ILLDSKNVIISTETISVGDLSSTIVNPREVFKPAIKKSAKSVILIHNHPSGNPAPSMEDY 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 ++T+ + + L+I V DHIIIG+D F SFK Sbjct: 191 HITKRLKEAGDILDIGVLDHIIIGRDDFYSFKKEG 225 >gi|108763923|ref|YP_630190.1| DNA repair protein RadC [Myxococcus xanthus DK 1622] gi|108467803|gb|ABF92988.1| DNA repair protein RadC [Myxococcus xanthus DK 1622] Length = 241 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L + N+L+ D + GT++ PV RE+ L ATSI+L HNHPSG+P PS D+ Sbjct: 127 LCFNARNVLVHDARVAEGTMNTCPVDPREVFAAALTSRATSIVLAHNHPSGDPEPSVQDL 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++++ LNI V DH+++G +VS ++ Sbjct: 187 GLTRHLVAGAQLLNIKVLDHVVMGDGGYVSMLERGLM 223 >gi|145299092|ref|YP_001141933.1| RadC family DNA repair protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142851864|gb|ABO90185.1| DNA repair protein, RadC family [Aeromonas salmonicida subsp. salmonicida A449] Length = 163 Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + +I GTID VY RE+V+ L+ +A ++IL HNHPSG PS ADI Sbjct: 67 ILLDNQHRVIDTVDLIHGTIDSAAVYPREVVKTALKYNAAAVILAHNHPSGIAEPSRADI 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+ + I V DH+++ + VSF +I Sbjct: 127 QITERLQAALDFVEIRVLDHVVVAGEYSVSFAERGLI 163 >gi|196230018|ref|ZP_03128881.1| DNA repair protein RadC [Chthoniobacter flavus Ellin428] gi|196225615|gb|EDY20122.1| DNA repair protein RadC [Chthoniobacter flavus Ellin428] Length = 231 Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 5/102 (4%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD +LI E S G+++ + RE+ + L SA ++ILVHNHPSG+P PS AD Sbjct: 130 VLLDTKYLLIRVEEISHGSLNESIAHPREVFRPALIYSAYAVILVHNHPSGDPTPSSADH 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDA-----FVSFKGLRII 97 +T+ ++ L I + DH+I+G + SFK II Sbjct: 190 QLTRRLVQGAELLQIRLLDHVILGTGDNGRLPYFSFKEAGII 231 >gi|331091135|ref|ZP_08339977.1| hypothetical protein HMPREF9477_00620 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405357|gb|EGG84893.1| hypothetical protein HMPREF9477_00620 [Lachnospiraceae bacterium 2_1_46FAA] Length = 231 Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ LI + S+GT++ V RE+ L+ +A SIIL+HNHPSG+P PS DI Sbjct: 135 LMLNTKARLIGETDISKGTVNASLVSPRELFIEALQKNAVSIILLHNHPSGDPTPSKEDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + + I + DHIIIG + ++S ++ Sbjct: 195 LITKRIKEAGSLIGIELLDHIIIGNNCYISLAEKNLV 231 >gi|145219983|ref|YP_001130692.1| DNA repair protein RadC [Prosthecochloris vibrioformis DSM 265] gi|238685550|sp|A4SFD1|Y1178_PROVI RecName: Full=UPF0758 protein Cvib_1178 gi|145206147|gb|ABP37190.1| DNA replication and repair protein RadC [Chlorobium phaeovibrioides DSM 265] Length = 223 Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N + E + GT++ ++ RE+ + + SA +IILVHNHPSG+ PS+AD Sbjct: 126 LHLNTKNQITKCEEVTIGTLNASLIHPREVFKAAIRESANAIILVHNHPSGDTEPSNADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + I + DH+IIGK + SF+ + Sbjct: 186 QVTNLLKQASAVIQIDLLDHVIIGKTGWYSFRENNQL 222 >gi|220932261|ref|YP_002509169.1| DNA repair protein RadC [Halothermothrix orenii H 168] gi|219993571|gb|ACL70174.1| DNA repair protein RadC [Halothermothrix orenii H 168] Length = 228 Score = 120 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + D N LIA SRG + V+ RE+ + + S+ ++ILVHNHPSG+P+PSD DI Sbjct: 132 ILFDIKNQLIAISEISRGGLSSSIVHPREVFKEAIRRSSAAVILVHNHPSGDPSPSDEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ ++ + L + V DHIIIG ++S K +I Sbjct: 192 NVTRRLVDSGKILGVDVLDHIIIGDGVYLSMKKENLI 228 >gi|218282132|ref|ZP_03488431.1| hypothetical protein EUBIFOR_01006 [Eubacterium biforme DSM 3989] gi|218216925|gb|EEC90463.1| hypothetical protein EUBIFOR_01006 [Eubacterium biforme DSM 3989] Length = 224 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI+ V +GT++ V+ RE+ + +A S+++ HNHPSG+ PS AD Sbjct: 127 LYLDTKSKLISHRVLFKGTLNESVVHPREVFKEAFLQNANSVLIAHNHPSGDCTPSKADF 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ + + + DHII+ K+ + SFK + + Sbjct: 187 EVTYKMVHVAMTMGVCLVDHIIVCKNQYYSFKEHKYL 223 >gi|325661600|ref|ZP_08150224.1| hypothetical protein HMPREF0490_00958 [Lachnospiraceae bacterium 4_1_37FAA] gi|331084842|ref|ZP_08333930.1| hypothetical protein HMPREF0987_00233 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325472127|gb|EGC75341.1| hypothetical protein HMPREF0490_00958 [Lachnospiraceae bacterium 4_1_37FAA] gi|330410936|gb|EGG90358.1| hypothetical protein HMPREF0987_00233 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 231 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ L+ + S+GT++ + RE+ L+ +A SIIL+HNHPSG+P PS D+ Sbjct: 135 LMLNTKAKLLGETTISKGTVNASLLTPRELFIEALQKNAVSIILLHNHPSGDPTPSREDL 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + + I + DHIIIG + ++SF +I Sbjct: 195 LITKRIKEAGSLIGIELLDHIIIGNNCYISFAEQELI 231 >gi|188992506|ref|YP_001904516.1| DNA repair protein radC homolog [Xanthomonas campestris pv. campestris str. B100] gi|167734266|emb|CAP52476.1| DNA repair protein radC homolog [Xanthomonas campestris pv. campestris] Length = 159 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 41/96 (42%), Positives = 58/96 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E GTID ++ R + +R LEL+A ++IL HNHPSGNP PS+AD Sbjct: 63 VFLDNQHHILAAEHLFSGTIDGCEIHPRVVAKRALELNAAAVILFHNHPSGNPEPSEADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +TQ + L L+I V DH++IG VS Sbjct: 123 KVTQRLQEALGLLDIRVLDHLVIGGQKSVSLAARGW 158 >gi|153953499|ref|YP_001394264.1| DNA repair protein RadC [Clostridium kluyveri DSM 555] gi|219854121|ref|YP_002471243.1| hypothetical protein CKR_0778 [Clostridium kluyveri NBRC 12016] gi|189029393|sp|A5N6I5|Y865_CLOK5 RecName: Full=UPF0758 protein CKL_0865 gi|254764433|sp|B9E004|Y778_CLOK1 RecName: Full=UPF0758 protein CKR_0778 gi|146346380|gb|EDK32916.1| DNA repair protein RadC-like protein [Clostridium kluyveri DSM 555] gi|219567845|dbj|BAH05829.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 228 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N++I + GT++ V+ REI ++ ++ SIIL HNHPSG+P+PS+ D+ Sbjct: 132 ILLNTKNMVIGIKNVFIGTLNSSIVHPREIFFYAIKKNSASIILCHNHPSGDPSPSNEDV 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + L I + DH+IIG F+S K I+ Sbjct: 192 NVTFRLKKCGELLGIQLVDHLIIGNGIFISLKEKGIL 228 >gi|317123022|ref|YP_004103025.1| DNA repair protein RadC [Thermaerobacter marianensis DSM 12885] gi|315593002|gb|ADU52298.1| DNA repair protein RadC [Thermaerobacter marianensis DSM 12885] Length = 351 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ + ++ ++ S GT++ V+ RE+ + + A ++ILVHNHPSG+P PS D+ Sbjct: 252 VLLNTKHYVLGVDLISIGTLNGSMVHPREVFRAAVRRGAAALILVHNHPSGDPTPSPEDV 311 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DH+IIG ++S + ++ Sbjct: 312 QVTRRLVEAGRIMGIDVLDHVIIGNQRYISLREAGLV 348 >gi|325849901|ref|ZP_08170940.1| DNA repair protein RadC [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325479925|gb|EGC83008.1| DNA repair protein RadC [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 226 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N++I+ E+ S G ++ V RE + SA +II VHNHPSGN NPS D Sbjct: 130 ILLDTKNVIISKELISTGDLNSSIVNPRECFIAAVRKSANAIIFVHNHPSGNCNPSRNDK 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L+I V DHI+IG + SFK ++ Sbjct: 190 IITDRLVQAGKILDISVLDHIVIGNGKYFSFKKECLM 226 >gi|323699098|ref|ZP_08111010.1| DNA repair protein RadC [Desulfovibrio sp. ND132] gi|323459030|gb|EGB14895.1| DNA repair protein RadC [Desulfovibrio desulfuricans ND132] Length = 229 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N ++A E S+GT + ++ REI L+L AT++ILVHNHP G +PS ADI Sbjct: 133 VFLDTKNRVMAWEQMSKGTTNATAIFPREIAAAALKLEATNVILVHNHPGGGSDPSGADI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L+I V DHII+ + SF + Sbjct: 193 LLTDKVVEACASLDIAVRDHIIVTDHDYYSFNEFGRL 229 >gi|148654928|ref|YP_001275133.1| DNA repair protein RadC [Roseiflexus sp. RS-1] gi|166218791|sp|A5URD0|Y767_ROSS1 RecName: Full=UPF0758 protein RoseRS_0767 gi|148567038|gb|ABQ89183.1| DNA repair protein RadC [Roseiflexus sp. RS-1] Length = 233 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N + + G++ V I EI + + L++ SII+VHNHPSG+P PS D+ Sbjct: 133 ICLDTKNRVQKIQTVYIGSLHTSMVRIGEIFKEPIRLNSASIIVVHNHPSGDPTPSPEDV 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ II L+I V DH++IG FVS + + Sbjct: 193 VVTRQIIEAGRLLDIDVLDHLVIGAGRFVSMRERGL 228 >gi|59714363|ref|YP_207137.1| DNA repair protein RadC [Vibrio fischeri ES114] gi|59482640|gb|AAW88249.1| DNA repair protein RadC [Vibrio fischeri ES114] Length = 165 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI S G+I VY RE+++ L +A ++I HNHPSG PSDAD Sbjct: 69 LMLDNQHRLIKFVEHSVGSISSASVYPREVLKSVLHYNAAAVIFAHNHPSGVAEPSDADR 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + L +++ V DH +IG VSF I Sbjct: 129 RITARLSSALELIDVKVLDHFVIGVGETVSFAKRGWI 165 >gi|332188698|ref|ZP_08390412.1| DNA repair RadC family protein [Sphingomonas sp. S17] gi|332011262|gb|EGI53353.1| DNA repair RadC family protein [Sphingomonas sp. S17] Length = 229 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 66/97 (68%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N+LI DE+ G+ID PVYIRE+++R ++ + ++ILVHNHPSG+P+PS ADI Sbjct: 133 LHLNTRNMLIRDELMGEGSIDQAPVYIREVIRRAIDFGSAALILVHNHPSGDPSPSRADI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ I L I VHDH+IIG VS + +I Sbjct: 193 DVTRAIAEAGKRLGITVHDHLIIGTSGHVSLRAQGLI 229 >gi|293406039|ref|ZP_06650027.1| DNA repair protein [Escherichia coli FVEC1412] gi|291426883|gb|EFE99913.1| DNA repair protein [Escherichia coli FVEC1412] Length = 155 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 35/89 (39%), Positives = 54/89 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFV 89 +T+ ++ L ++I V DH+I+G Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVF 155 >gi|89895926|ref|YP_519413.1| hypothetical protein DSY3180 [Desulfitobacterium hafniense Y51] gi|219670358|ref|YP_002460793.1| DNA repair protein RadC [Desulfitobacterium hafniense DCB-2] gi|122481851|sp|Q24SM3|Y3180_DESHY RecName: Full=UPF0758 protein DSY3180 gi|254789647|sp|B8FVF5|Y4352_DESHD RecName: Full=UPF0758 protein Dhaf_4352 gi|89335374|dbj|BAE84969.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219540618|gb|ACL22357.1| DNA repair protein RadC [Desulfitobacterium hafniense DCB-2] Length = 227 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 55/95 (57%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L N ++ S G+++ V+ RE + + ++ +IIL+HNHPSG+P PS DI++ Sbjct: 133 LSTKNHVLGISSISVGSLNSSLVHPRECFKEAIRRNSNAIILLHNHPSGDPTPSSEDIDV 192 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L I V DH+IIG + ++S K I+ Sbjct: 193 TRRLSDGGQILGIEVLDHVIIGDNRYISLKERGIL 227 >gi|189184090|ref|YP_001937875.1| DNA repair protein RadC [Orientia tsutsugamushi str. Ikeda] gi|189180861|dbj|BAG40641.1| DNA repair protein RadC [Orientia tsutsugamushi str. Ikeda] Length = 226 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 52/97 (53%), Positives = 66/97 (68%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+K NI+IADE+ GT+D PVY REIV+R L A++IILVHNHPSG P PS DI Sbjct: 130 LFLNKKNIIIADELHGIGTVDQTPVYPREIVKRALFHEASAIILVHNHPSGTPKPSAIDI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I+ +IIVHDH+II + F SFK ++ Sbjct: 190 EITTKIVEACKTFSIIVHDHVIICSNNFFSFKSNLLL 226 >gi|199597494|ref|ZP_03210923.1| DNA repair protein [Lactobacillus rhamnosus HN001] gi|199591517|gb|EDY99594.1| DNA repair protein [Lactobacillus rhamnosus HN001] Length = 222 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 37/92 (40%), Positives = 57/92 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +I +++ + GT+D R + + L+LSAT++I+VHNHPSG+P+PS AD Sbjct: 124 LFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADR 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 + T L + + DH+IIG+ + SF Sbjct: 184 DTTTRFQLAAALLGMHLLDHLIIGRQTYYSFA 215 >gi|303241148|ref|ZP_07327656.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2] gi|302591275|gb|EFL61015.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2] Length = 226 Score = 120 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N + E+ GTI+ PVY R +V+ + A S+IL HNHP G+ NPS ADI Sbjct: 125 ICLDSQNKVNYSELVHEGTINEAPVYPRLLVEAAIRHKANSVILAHNHPGGSLNPSRADI 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I L ++I V DHII+ + SF + Sbjct: 185 EATRTICNALESISIKVIDHIIVCGGKYYSFAENGRM 221 >gi|168187572|ref|ZP_02622207.1| DNA repair protein [Clostridium botulinum C str. Eklund] gi|169294516|gb|EDS76649.1| DNA repair protein [Clostridium botulinum C str. Eklund] Length = 228 Score = 120 bits (302), Expect = 5e-26, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N++I+ + S G+++ V+ RE+ L+ ++ SI++ HNHPSG+P PS DI Sbjct: 132 IMLNTKNVVISCKDVSIGSLNSAIVHPREVFSEALKKNSASIVICHNHPSGDPTPSSEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L I + DH+IIG ++S K I+ Sbjct: 192 HVTKRLKKCGVILGIDLLDHLIIGHSNYISLKEKNIL 228 >gi|269958556|ref|YP_003328343.1| DNA repair protein RadC [Anaplasma centrale str. Israel] gi|269848385|gb|ACZ49029.1| DNA repair protein RadC [Anaplasma centrale str. Israel] Length = 230 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 65/97 (67%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+K +IADE+Q+ GTID P+Y+RE+V++ L A+ I++ HNHPSG+P PS ADI Sbjct: 134 LYLNKKYRVIADEIQNTGTIDETPLYVREVVKKSLLHDASYIVVSHNHPSGDPKPSKADI 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T + +NI++ DH+II SFK ++ Sbjct: 194 HITNRLQEACCSMNIVLVDHVIITPKRHYSFKTNGLL 230 >gi|154248875|ref|YP_001409700.1| DNA repair protein RadC [Fervidobacterium nodosum Rt17-B1] gi|154152811|gb|ABS60043.1| DNA repair protein RadC [Fervidobacterium nodosum Rt17-B1] Length = 225 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 1/94 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD +I + S+GTI+ + R+I + + S+T IIL HNHPSG+P PS DI Sbjct: 124 IFLDTKLKVIGSKDVSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPSKDDI 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ I L I +HDH+IIG F S + Sbjct: 184 ELTKKIKKAGELLGINLHDHVIIG-QTFYSLRQK 216 >gi|88606961|ref|YP_504859.1| DNA repair protein RadC [Anaplasma phagocytophilum HZ] gi|88598024|gb|ABD43494.1| DNA repair protein RadC [Anaplasma phagocytophilum HZ] Length = 232 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 64/97 (65%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+K LIADEVQS GT+D P+YIRE++++ L A I++ HNHPSG+P PS ADI Sbjct: 136 LYLNKRYSLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPSKADI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + N ++I + DH+I+ SFK ++ Sbjct: 196 NVTNKLRIACNSMDIELVDHVIVTSKRHYSFKTHGLL 232 >gi|218132457|ref|ZP_03461261.1| hypothetical protein BACPEC_00316 [Bacteroides pectinophilus ATCC 43243] gi|217992567|gb|EEC58569.1| hypothetical protein BACPEC_00316 [Bacteroides pectinophilus ATCC 43243] Length = 246 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD LI DE+ S GT++ V REI L A I+++HNHPSG+ PS DI Sbjct: 146 VMLDTKLRLIKDEIISTGTVNASIVSPREIFVAALRAGAVFIVMLHNHPSGDAEPSSNDI 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I + DHIIIG + FVS K ++ Sbjct: 206 AITRRVQLAGEMLGISLIDHIIIGDNRFVSLKESGLM 242 >gi|294140110|ref|YP_003556088.1| DNA repair protein, RadC family [Shewanella violacea DSS12] gi|293326579|dbj|BAJ01310.1| DNA repair protein, RadC family [Shewanella violacea DSS12] Length = 158 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ + LI GTID VY RE+V+ LE++A ++I HNHPSG PS AD Sbjct: 63 MMLNSQHQLIEFRELFFGTIDAASVYPREVVKAVLEVNAAAVIFSHNHPSGESEPSQADK 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DHI+IG SF ++ Sbjct: 123 LITKKLTDALGLIDVRVLDHIVIGA-TPTSFAEKGLL 158 >gi|187929782|ref|YP_001900269.1| DNA repair protein RadC [Ralstonia pickettii 12J] gi|238691809|sp|B2UAP0|Y2712_RALPJ RecName: Full=UPF0758 protein Rpic_2712 gi|187726672|gb|ACD27837.1| DNA repair protein RadC [Ralstonia pickettii 12J] Length = 224 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 39/94 (41%), Positives = 58/94 (61%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FLD + LIA E RGT+ VY REI +R L +A ++IL HNHP+GN PS++D+ Sbjct: 129 FLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDVI 188 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + L L++IV DH+I+G++ F Sbjct: 189 LTRELCRALAMLDVIVLDHMIVGRNHVYGFLEHG 222 >gi|119357558|ref|YP_912202.1| DNA repair protein RadC [Chlorobium phaeobacteroides DSM 266] gi|229485547|sp|A1BHA1|Y1761_CHLPD RecName: Full=UPF0758 protein Cpha266_1761 gi|119354907|gb|ABL65778.1| DNA replication and repair protein RadC [Chlorobium phaeobacteroides DSM 266] Length = 223 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I +E + GT++ + RE+ + + SA +IILVHNHPSG+ PS+AD Sbjct: 126 LHLNTKNQIIRNEQVTVGTLNASLAHPREVFKSAIRESAHAIILVHNHPSGDVEPSNADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L I + DH+IIG D + SF+ ++ Sbjct: 186 QVTEILRQAGSFLQIDLLDHVIIGVDTWFSFREHSLL 222 >gi|256420577|ref|YP_003121230.1| DNA repair protein RadC [Chitinophaga pinensis DSM 2588] gi|256035485|gb|ACU59029.1| DNA repair protein RadC [Chitinophaga pinensis DSM 2588] Length = 237 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ + ++ S G I V + I + LEL AT +IL HNHPSGN PS ADI Sbjct: 140 LYLNHASRVLQHRCISIGGITGTIVDPKVIFREALELGATQVILCHNHPSGNLRPSTADI 199 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+I V DHII+ + + S I Sbjct: 200 QITEKLKAAGRLLDISVLDHIIVSEAGYCSMVEEGFI 236 >gi|225572122|ref|ZP_03780986.1| hypothetical protein RUMHYD_00416 [Blautia hydrogenotrophica DSM 10507] gi|225040388|gb|EEG50634.1| hypothetical protein RUMHYD_00416 [Blautia hydrogenotrophica DSM 10507] Length = 228 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +A+ V + GT++ + RE+ L A +I+L+HNHPSG+P PS DI Sbjct: 131 VMLNTKNQYLAERVITTGTVNASLISARELFLEALRNKAVNILLIHNHPSGDPTPSREDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 TQ I L+I + DHI+IG +VS + +I Sbjct: 191 LATQKIFQVGELLDIRLLDHIVIGDQRYVSMRSEGLI 227 >gi|55823375|ref|YP_141816.1| DNA repair protein RadC [Streptococcus thermophilus CNRZ1066] gi|73913743|sp|Q5LYU6|Y1465_STRT1 RecName: Full=UPF0758 protein str1465 gi|55739360|gb|AAV63001.1| DNA repair protein [Streptococcus thermophilus CNRZ1066] Length = 228 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G + REI+ L ATS+I+VHNHPSG PS DI Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILYYACHLMATSLIVVHNHPSGEAYPSRNDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 + TQ I + + L I + DH+I+GK + SF+ R Sbjct: 189 DFTQKIKRSCDDLGICLLDHLIVGKSTYYSFREER 223 >gi|329113315|ref|ZP_08242096.1| DNA repair protein RadC [Acetobacter pomorum DM001] gi|326697140|gb|EGE48800.1| DNA repair protein RadC [Acetobacter pomorum DM001] Length = 254 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 45/97 (46%), Positives = 64/97 (65%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ + L+ D+V +GT+DH PVY REIV R L+L AT ++LVHNHPSG+P PS D+ Sbjct: 158 LFLNEKHQLLVDDVMGQGTVDHTPVYPREIVSRALQLKATILVLVHNHPSGDPTPSADDV 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I +NI V DHII+ + +S + ++ Sbjct: 218 VMTTQICGAAKIMNIHVWDHIIVAGEKLLSMREAGLL 254 >gi|261400629|ref|ZP_05986754.1| DNA repair protein RadC [Neisseria lactamica ATCC 23970] gi|313668384|ref|YP_004048668.1| DNA repair protein [Neisseria lactamica ST-640] gi|269209535|gb|EEZ75990.1| DNA repair protein RadC [Neisseria lactamica ATCC 23970] gi|313005846|emb|CBN87302.1| putative DNA repair protein [Neisseria lactamica 020-06] Length = 225 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LI SRGT+ +YIREIV+ L+ A S+I+ HNHP G+P PS ADI Sbjct: 128 LLLNRQNRLIGVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSHADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + ++ +++ + DH I+ SF+ L ++ Sbjct: 188 AFTRRLAQAMSLVDVSLLDHFIVTSQTVCSFRQLGLM 224 >gi|38638114|ref|NP_943224.1| hypothetical protein pEL60p25 [Erwinia amylovora] gi|37682012|gb|AAQ97899.1| ORF25 [Erwinia amylovora] Length = 149 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 57/96 (59%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FL+ HN +IA E +GTI V V+ R ++QR L +A +++L HNHPS N PS AD Sbjct: 54 FLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTTPSQADKL 113 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH+I+G SF +I Sbjct: 114 ITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGLI 149 >gi|164687854|ref|ZP_02211882.1| hypothetical protein CLOBAR_01498 [Clostridium bartlettii DSM 16795] gi|164603129|gb|EDQ96594.1| hypothetical protein CLOBAR_01498 [Clostridium bartlettii DSM 16795] Length = 235 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I D S GT++ V+ RE+ + + S+ IIL+HNHPSG P PS D Sbjct: 139 VLLNTKNEIITDIDISIGTLNSSLVHPREVFREAIRRSSNKIILIHNHPSGCPTPSAEDK 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ + + I V DHIIIG + SFK +I Sbjct: 199 VVTNRLVKCGDIIGIEVIDHIIIGDGLYFSFKENMLI 235 >gi|37524159|ref|NP_927503.1| hypothetical protein plu0133 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36783582|emb|CAE12428.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 157 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+ E GTI H + REIV+ L +A ++IL HNHPSG + S AD Sbjct: 61 LYLDNQHRLLEHETLFLGTISHTEAHPREIVKSALRHNAAAVILAHNHPSGITDASKADR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I+ TLN + + V H IIG +SF + + Sbjct: 121 TITDRIVNTLNLVEVRVLGHFIIGDGNTLSFAEMGWL 157 >gi|297183085|gb|ADI19229.1| DNA repair proteins [uncultured delta proteobacterium HF0200_14D13] Length = 619 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + ++ + ++G ++ V+ RE+ R +E A +++ VHNHPSG+P PS D Sbjct: 523 VLLDNKHRVLEEVNVTQGLLNKSLVHPREVFARAVEARAAALVCVHNHPSGDPEPSPEDR 582 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + + I V DH++IG+D + SF ++ Sbjct: 583 RITERLVESGKLIGIQVLDHVVIGRDDYFSFADKGLL 619 >gi|238028403|ref|YP_002912634.1| DNA repair protein RadC [Burkholderia glumae BGR1] gi|237877597|gb|ACR29930.1| DNA repair protein RadC [Burkholderia glumae BGR1] Length = 266 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + L+ DE + GT+ + VY REIV+R LEL A ++I+ HNHPSG PS D Sbjct: 170 LYLDAQHRLVHDEEATHGTLTRMAVYPREIVRRALELKAAALIVAHNHPSGAVRPSAEDR 229 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DHI++G SF ++ Sbjct: 230 RLTRVLHDALALVDVRLIDHIVVGASETFSFAQAGLM 266 >gi|212695706|ref|ZP_03303834.1| hypothetical protein ANHYDRO_00226 [Anaerococcus hydrogenalis DSM 7454] gi|212677379|gb|EEB36986.1| hypothetical protein ANHYDRO_00226 [Anaerococcus hydrogenalis DSM 7454] Length = 226 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N++I+ E+ S G ++ V RE + SA +II VHNHPSGN NPS D Sbjct: 130 ILLDTKNVIISKELISTGDLNSSIVNPRECFIAAVRKSANAIIFVHNHPSGNCNPSRNDK 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L+I V DHI+IG + SFK ++ Sbjct: 190 IITDRLVQAGKILDISVLDHIVIGNGKYFSFKKECLM 226 >gi|253699429|ref|YP_003020618.1| DNA repair protein RadC [Geobacter sp. M21] gi|251774279|gb|ACT16860.1| DNA repair protein RadC [Geobacter sp. M21] Length = 166 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N + + S G+++ V+ RE+ + L SA ++IL+HNHP+G+P PS DI Sbjct: 71 VHLDGKNRICCIDEVSVGSLNQSIVHPREVFKTALLSSAAALILLHNHPTGDPTPSREDI 130 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + + + DH+IIG F+SF ++ Sbjct: 131 EITRRLKEAGDLIGVKILDHVIIGDH-FLSFANAGLL 166 >gi|91204972|ref|YP_537327.1| DNA repair protein RadC [Rickettsia bellii RML369-C] gi|91068516|gb|ABE04238.1| DNA repair protein RadC [Rickettsia bellii RML369-C] Length = 249 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 55/97 (56%), Positives = 71/97 (73%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+K NILIADEV S+GTID VY REI++R L A++IILVHNHPSG+P+PS A I Sbjct: 153 LFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKAGI 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT I+ +NIIVHDH+II + + SFK ++ Sbjct: 213 DMTNIIVDMCKTINIIVHDHVIISNNKYFSFKSNMLL 249 >gi|221199269|ref|ZP_03572313.1| DNA repair protein RadC [Burkholderia multivorans CGD2M] gi|221205829|ref|ZP_03578844.1| DNA repair protein RadC [Burkholderia multivorans CGD2] gi|221174667|gb|EEE07099.1| DNA repair protein RadC [Burkholderia multivorans CGD2] gi|221180554|gb|EEE12957.1| DNA repair protein RadC [Burkholderia multivorans CGD2M] Length = 214 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI E +RG++ + VY REIV+ + L+A ++I+ HNHPSG PS D Sbjct: 118 LYLDARHGLIDMEENARGSLTRMAVYPREIVRSAMRLNAAALIVAHNHPSGAVQPSAEDR 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++GK SF + Sbjct: 178 RLTRTLRDALALVDVRLLDHVVVGKADTFSFARAGWL 214 >gi|134095055|ref|YP_001100130.1| putative DNA repair protein in putative prophage region (radC-like) [Herminiimonas arsenicoxydans] gi|133738958|emb|CAL62006.1| Putative DNA repair protein RadC-like [Herminiimonas arsenicoxydans] Length = 166 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I RGTID VY RE+ + LE +A ++IL HNHPSG P PS ADI Sbjct: 70 LLLDTQHKIIGFHEMFRGTIDSTSVYPREVAKLALEHNAAAVILTHNHPSGEPTPSQADI 129 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ +I +L + + V DHI++ S Sbjct: 130 KLTKVLIESLALIGVRVLDHIVVSSQGCASLAERG 164 >gi|119943849|ref|YP_941529.1| DNA repair protein RadC [Psychromonas ingrahamii 37] gi|171704612|sp|A1SR15|Y056_PSYIN RecName: Full=UPF0758 protein Ping_0056 gi|119862453|gb|ABM01930.1| DNA repair protein RadC [Psychromonas ingrahamii 37] Length = 225 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + +I G+ID V+ R I Q+ L +A +IILVHNHPSG+P+ S+AD Sbjct: 129 ILLDTQHRIIRFHEFFFGSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSASEADK 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I++ L +++ V DH+++G SF I Sbjct: 189 MITQKIVSALQLIDVRVLDHLVVGHKKCTSFAENGWI 225 >gi|241663908|ref|YP_002982268.1| DNA repair protein RadC [Ralstonia pickettii 12D] gi|240865935|gb|ACS63596.1| DNA repair protein RadC [Ralstonia pickettii 12D] Length = 224 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 39/94 (41%), Positives = 58/94 (61%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FLD + LIA E RGT+ VY REI +R L +A ++IL HNHP+GN PS++D+ Sbjct: 129 FLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDVI 188 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + L L++IV DH+I+G++ F Sbjct: 189 LTRELCRALAMLDVIVLDHMIVGRNHVYGFLEHG 222 >gi|55821449|ref|YP_139891.1| DNA repair protein RadC [Streptococcus thermophilus LMG 18311] gi|73913744|sp|Q5M3F9|Y1465_STRT2 RecName: Full=UPF0758 protein stu1465 gi|55737434|gb|AAV61076.1| DNA repair protein [Streptococcus thermophilus LMG 18311] gi|312278780|gb|ADQ63437.1| DNA repair protein RadC [Streptococcus thermophilus ND03] Length = 228 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G + REI+ L ATS+I+VHNHPSG PS DI Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILYYACHLMATSLIVVHNHPSGEAYPSRNDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 + TQ I + + L I + DH+I+GK + SF+ R Sbjct: 189 DFTQKIKRSCDDLGICLLDHLIVGKSTYYSFREER 223 >gi|254523925|ref|ZP_05135980.1| DNA repair protein RadC [Stenotrophomonas sp. SKA14] gi|219721516|gb|EED40041.1| DNA repair protein RadC [Stenotrophomonas sp. SKA14] Length = 110 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F++ + ++A E GTI+ VY R ++QR L+L+A ++I H HPSG PS+AD Sbjct: 14 VFMNSMHDVLAVEPMFHGTINATSVYPRVVLQRALQLNAAAVIFAHQHPSGTTEPSNADR 73 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + T L +++ V DH +IG+ SF ++ Sbjct: 74 LLTEQLKTALALIDVRVLDHFVIGQGTPYSFAESGLL 110 >gi|319892706|ref|YP_004149581.1| DNA repair protein RadC [Staphylococcus pseudintermedius HKU10-03] gi|317162402|gb|ADV05945.1| DNA repair protein RadC [Staphylococcus pseudintermedius HKU10-03] Length = 227 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 32/90 (35%), Positives = 59/90 (65%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N ++ ++ GT++ ++ RE+ + L+ SA +II++HNHPSG+ PS+ADI Sbjct: 130 LILNTKNQIVHEQTLFIGTLNSAIIHPREVFKTALKWSANAIIVIHNHPSGDATPSEADI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90 T+ ++ + I + DHI+IG++++VS Sbjct: 190 ETTKRLVACGEAMGIELLDHIVIGEESYVS 219 >gi|284035456|ref|YP_003385386.1| DNA repair protein RadC [Spirosoma linguale DSM 74] gi|283814749|gb|ADB36587.1| DNA repair protein RadC [Spirosoma linguale DSM 74] Length = 231 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L +++ N ++ S G + + I ++ +E A+S+IL HNHPSGN PS AD Sbjct: 135 LLMNRANEILRPVQISTGGVSGTIADPKLIFKQAIEYLASSMILFHNHPSGNLTPSQADK 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L+I V DH+I A+ SF I+ Sbjct: 195 DLTRKLKDAGRLLDIPVLDHLIFTDKAYYSFADEGIL 231 >gi|322516365|ref|ZP_08069290.1| DNA repair protein RadC [Streptococcus vestibularis ATCC 49124] gi|322125098|gb|EFX96491.1| DNA repair protein RadC [Streptococcus vestibularis ATCC 49124] Length = 228 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G + REI+ L ATS+I+VHNHPSG PS DI Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSRNDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 + TQ I + + L I + DHII+GK + SF+ R Sbjct: 189 DFTQKIKRSCDDLGICLLDHIIVGKSTYYSFREER 223 >gi|315651397|ref|ZP_07904422.1| DNA repair protein RadC [Eubacterium saburreum DSM 3986] gi|315486356|gb|EFU76713.1| DNA repair protein RadC [Eubacterium saburreum DSM 3986] Length = 236 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 45/97 (46%), Positives = 65/97 (67%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD I+D V S GT++ V +REI+ L+ A ++IL+HNHPSG+P+PS ADI Sbjct: 140 VFLDTRQRPISDMVISVGTVNSSLVSVREILIESLKHLAVNVILLHNHPSGDPSPSKADI 199 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+NI LN + I + DHI+IG + + SFK II Sbjct: 200 DITKNINNALNSIGIELIDHIVIGDNCYYSFKEQGII 236 >gi|312863769|ref|ZP_07724007.1| DNA repair protein RadC [Streptococcus vestibularis F0396] gi|311101305|gb|EFQ59510.1| DNA repair protein RadC [Streptococcus vestibularis F0396] Length = 228 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G + REI+ L ATS+I+VHNHPSG PS DI Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSRNDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 + TQ I + + L I + DHII+GK + SF+ R Sbjct: 189 DFTQKIKRSCDDLGICLLDHIIVGKSTYYSFREER 223 >gi|22299250|ref|NP_682497.1| DNA repair protein RadC [Thermosynechococcus elongatus BP-1] gi|32699671|sp|Q8DI83|Y1707_THEEB RecName: Full=UPF0758 protein tlr1707 gi|22295432|dbj|BAC09259.1| DNA repair protein [Thermosynechococcus elongatus BP-1] Length = 250 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 53/93 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + L+ V + GT + REI + + +A+ +I+ HNHPSGN +PS AD+ Sbjct: 143 LLLDVRHRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIAHNHPSGNLSPSQADL 202 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 ++T+ I+ + I V DH+I+G + S + Sbjct: 203 DLTKQILQAGQLMEIPVLDHLILGNGDYQSLRE 235 >gi|146318725|ref|YP_001198437.1| DNA repair protein [Streptococcus suis 05ZYH33] gi|145689531|gb|ABP90037.1| DNA repair protein [Streptococcus suis 05ZYH33] Length = 117 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 56/94 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I+ + G+++ REI+ ++ ATSII+VHNHPSG+ PS D+ Sbjct: 20 LYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDL 79 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+N+ + L +++ DH+I+G + SF+ Sbjct: 80 LFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 113 >gi|293115593|ref|ZP_05792219.2| DNA repair protein RadC [Butyrivibrio crossotus DSM 2876] gi|292808989|gb|EFF68194.1| DNA repair protein RadC [Butyrivibrio crossotus DSM 2876] Length = 233 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ LI +++ S GT+++ + RE+ + L A II+VHNHPSG+P PS D Sbjct: 137 LLLNTKCELINEKILSMGTVNYTCITSREVYRYALSKGAVYIIVVHNHPSGDPTPSREDS 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + I + DHIIIG + ++S K +I Sbjct: 197 LCTKKLKEAGELVGIPLIDHIIIGDNRYISLKEQDMI 233 >gi|309378585|emb|CBX22763.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 225 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LI SRGT+ +YIREIV+ L+ A S+I+ HNHP G+P PS ADI Sbjct: 128 LLLNRQNRLIGVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSHADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + ++ +++ + DH I+ SF+ L ++ Sbjct: 188 AFTRRLAQAMSLVDVSLLDHFIVTSQTVCSFRQLGLM 224 >gi|37523034|ref|NP_926411.1| DNA repair protein RadC [Gloeobacter violaceus PCC 7421] gi|35214037|dbj|BAC91406.1| DNA repair protein [Gloeobacter violaceus PCC 7421] Length = 242 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 39/94 (41%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LIA + S GTID + REI + + A II+ HNHPSG PS D+ Sbjct: 143 LLLDVKNRLIAHRIVSVGTIDETLAHPREIFREAIRQGAAGIIVAHNHPSGVTEPSPEDL 202 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T +I L I V DH+I+G+ F S + L Sbjct: 203 RLTGQLIECGRTLQIPVLDHVILGQGNFTSLRRL 236 >gi|148284968|ref|YP_001249058.1| DNA repair protein [Orientia tsutsugamushi str. Boryong] gi|146740407|emb|CAM80876.1| DNA repair protein [Orientia tsutsugamushi str. Boryong] Length = 226 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 52/97 (53%), Positives = 66/97 (68%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+K NI+IADE+ GT+D PVY REIV+R L A++IILVHNHPSG P PS DI Sbjct: 130 LFLNKKNIIIADELHGIGTVDQTPVYPREIVKRALFHEASAIILVHNHPSGTPKPSAIDI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I+ +IIVHDH+II + F SFK ++ Sbjct: 190 EITTKIVEACKTFSIIVHDHVIICSNNFFSFKSNLLL 226 >gi|83643512|ref|YP_431947.1| DNA repair protein [Hahella chejuensis KCTC 2396] gi|83631555|gb|ABC27522.1| DNA repair protein [Hahella chejuensis KCTC 2396] Length = 146 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I + RGT D +++REI ++ L L+A ++IL HNHPS N PS ADI Sbjct: 50 MFLDNQHRVIEFDAMFRGTFDKATIHVREIAKKALLLNAAAVILSHNHPSQNSTPSQADI 109 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I +LN + V DH+IIG SF ++ Sbjct: 110 RITEEIKKSLNFFEVRVLDHVIIGGTNKYSFAENGLL 146 >gi|228477172|ref|ZP_04061810.1| DNA repair protein RadC [Streptococcus salivarius SK126] gi|228251191|gb|EEK10362.1| DNA repair protein RadC [Streptococcus salivarius SK126] Length = 228 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G + REI+ L ATS+I+VHNHPSG PS DI Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSRNDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 + TQ I + + L I + DH+I+GK + SF+ R Sbjct: 189 DFTQKIKRSCDDLGICLLDHLIVGKSTYYSFREER 223 >gi|126730724|ref|ZP_01746534.1| DNA repair protein RadC [Sagittula stellata E-37] gi|126708890|gb|EBA07946.1| DNA repair protein RadC [Sagittula stellata E-37] Length = 146 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 46/96 (47%), Positives = 69/96 (71%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD+ N +I+DE+ S GT+DHVPVY RE+++R L L+A +++L+HNHPSG+P PSDADI+ Sbjct: 51 YLDRKNRIISDELLSIGTVDHVPVYPREVIKRALMLNACALVLIHNHPSGDPTPSDADIS 110 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 M + I L + +HDHII+G +S + L + Sbjct: 111 MIKEIQKGCRYLGLTLHDHIIVGAGTELSLRALGKL 146 >gi|312865347|ref|ZP_07725575.1| DNA repair protein RadC [Streptococcus downei F0415] gi|311099458|gb|EFQ57674.1| DNA repair protein RadC [Streptococcus downei F0415] Length = 231 Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LI + G++ REI+ ATS+I+VHNHPSG P+PS DI Sbjct: 129 LYLDTQNRLIKQQTIFIGSVQRSIAEPREILHYACRFMATSVIVVHNHPSGQPDPSRYDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + L + DHII+G D + SF+ Sbjct: 189 AFTEKIKRCCDDLGLAFLDHIIVGSDNYYSFREE 222 >gi|295698144|ref|YP_003602800.1| DNA repair protein RadC [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295060256|gb|ADF64992.1| DNA repair protein RadC [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 147 Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ + LI+ E+ GTI+ + RE+ + L L+A ++I HNHPSG P PS ADI Sbjct: 51 LYLNNQHQLISFELIHSGTINSCVISPREVARLALMLNAQAVIFAHNHPSGTPEPSRADI 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 NMT + T L I DH I+ + VS I Sbjct: 111 NMTARLKTALELFEISTLDHFIVAGNDVVSMAERGHI 147 >gi|160899615|ref|YP_001565197.1| DNA repair protein RadC [Delftia acidovorans SPH-1] gi|163858581|ref|YP_001632879.1| DNA repair protein radC-like protein [Bordetella petrii DSM 12804] gi|160365199|gb|ABX36812.1| DNA repair protein RadC [Delftia acidovorans SPH-1] gi|163262309|emb|CAP44612.1| DNA repair protein radC homolog [Bordetella petrii] gi|327479847|gb|AEA83157.1| DNA repair protein RadC [Pseudomonas stutzeri DSM 4166] Length = 164 Score = 119 bits (300), Expect = 9e-26, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F++ + ++A E GTI+ VY R ++QR L+L+A ++I H HPSG PS+AD Sbjct: 68 VFMNSMHDVLAVEPMFHGTINATSVYPRVVLQRALQLNAAAVIFAHQHPSGTTEPSNADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + T L +++ V DH +IG+ SF ++ Sbjct: 128 LLTEQLKTALALIDVRVLDHFVIGQGTPYSFAESGLL 164 >gi|116628169|ref|YP_820788.1| DNA repair protein RadC [Streptococcus thermophilus LMD-9] gi|122267235|sp|Q03JN0|Y1430_STRTD RecName: Full=UPF0758 protein STER_1430 gi|116101446|gb|ABJ66592.1| DNA repair protein [Streptococcus thermophilus LMD-9] Length = 228 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G + REI+ L ATS+I+VHNHPSG PS DI Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSRNDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 + TQ I + + L I + DH+I+GK + SF+ R Sbjct: 189 DFTQKIKRSCDDLGICLLDHLIVGKSTYYSFREER 223 >gi|254501417|ref|ZP_05113568.1| DNA repair protein RadC [Labrenzia alexandrii DFL-11] gi|222437488|gb|EEE44167.1| DNA repair protein RadC [Labrenzia alexandrii DFL-11] Length = 228 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 50/97 (51%), Positives = 70/97 (72%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+K + +IADEV GT+DH PVY RE+++R L L A+++ILVHNHPSG+P PS DI Sbjct: 132 LFLNKKHGVIADEVMQEGTVDHTPVYPRELMRRALILQASALILVHNHPSGDPTPSRPDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT ++ PL I ++DHII+ + VSFKG+ ++ Sbjct: 192 EMTAQLVDIAKPLGIEINDHIIVARGLAVSFKGMNLL 228 >gi|322373383|ref|ZP_08047919.1| DNA repair protein RadC [Streptococcus sp. C150] gi|321278425|gb|EFX55494.1| DNA repair protein RadC [Streptococcus sp. C150] Length = 228 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I + G + REI+ L ATS+I+VHNHPSG PS DI Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSHNDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 + TQ I + N L I + DH+I+GK + SF+ R Sbjct: 189 DFTQKIKRSCNDLGICLLDHLIVGKSTYYSFREER 223 >gi|56417029|ref|YP_154103.1| DNA repair protein [Anaplasma marginale str. St. Maries] gi|222475397|ref|YP_002563814.1| DNA repair protein (radC) [Anaplasma marginale str. Florida] gi|255003383|ref|ZP_05278347.1| DNA repair protein (radC) [Anaplasma marginale str. Puerto Rico] gi|255004504|ref|ZP_05279305.1| DNA repair protein (radC) [Anaplasma marginale str. Virginia] gi|56388261|gb|AAV86848.1| DNA repair protein [Anaplasma marginale str. St. Maries] gi|222419535|gb|ACM49558.1| DNA repair protein (radC) [Anaplasma marginale str. Florida] Length = 230 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 65/97 (67%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+K +IADE+Q+ GTID P+Y+RE+V++ L A+ I++ HNHPSG+P PS ADI Sbjct: 134 LYLNKKYRIIADEIQNTGTIDETPLYVREVVKKSLLHDASYIVVSHNHPSGDPKPSKADI 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T + +NI++ DH+II SFK ++ Sbjct: 194 HITNRLQEACCSMNIVLVDHVIITPKRHYSFKTNGLL 230 >gi|67078119|ref|YP_245739.1| DNA repair protein [Bacillus cereus E33L] gi|66970425|gb|AAY60401.1| possible DNA repair protein [Bacillus cereus E33L] Length = 151 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 53/95 (55%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +I + S+G+I+ V+ RE + + +A SI+ HNHPSGNP+ S D + Sbjct: 56 LNTKNEIIGCSIVSQGSINSSVVHPRETFRTAILNNAASIVCFHNHPSGNPDASPEDREV 115 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L I + DH+IIG+ FVS + I Sbjct: 116 TKRLAECGKILGIELLDHVIIGEHRFVSLREKGCI 150 >gi|329889720|ref|ZP_08268063.1| hypothetical protein BDIM_14090 [Brevundimonas diminuta ATCC 11568] gi|328845021|gb|EGF94585.1| hypothetical protein BDIM_14090 [Brevundimonas diminuta ATCC 11568] Length = 98 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 52/97 (53%), Positives = 75/97 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LDK NIL+ +E ++ GT+DH PVY+RE+V+R LELSA+++ILVHNHPSG+P PS ADI Sbjct: 2 LYLDKRNILMREEHRADGTVDHAPVYVREVVRRALELSASAMILVHNHPSGDPTPSRADI 61 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ +I +I VHDH+++G++ SF+ L +I Sbjct: 62 EMTRRVIEAARVFDIQVHDHVVVGREGEQSFRALGLI 98 >gi|120437195|ref|YP_862881.1| DNA repair protein RadC [Gramella forsetii KT0803] gi|117579345|emb|CAL67814.1| DNA repair protein RadC [Gramella forsetii KT0803] Length = 232 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I S+G I V +R +++ LEL A S+IL HNHPSGN S+AD Sbjct: 136 IYLNNSNKVIEQFQISKGGITGTLVDVRITLKKALELGAVSLILAHNHPSGNLKASEADK 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + T L+I V DHII+ + +++SF ++ Sbjct: 196 QLTRKLKTASESLDIKVLDHIIVTEKSYLSFADEGML 232 >gi|311104975|ref|YP_003977828.1| DNA repair protein RadC 2 [Achromobacter xylosoxidans A8] gi|310759664|gb|ADP15113.1| DNA repair protein RadC 2 [Achromobacter xylosoxidans A8] Length = 225 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 36/95 (37%), Positives = 52/95 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD LIA +RGT+ VY RE+V+ L A ++I+ HNHPSG PS AD Sbjct: 129 LYLDNRLRLIATGELARGTLSQASVYPREVVREALRHHAAALIIAHNHPSGLAEPSAADR 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 TQ++ L ++I + DH+I+ +S L Sbjct: 189 GFTQHLKQALALVDIRLVDHLIVAAGTVISMAELG 223 >gi|323700938|gb|ADY00091.1| hypothetical protein [Escherichia coli] Length = 149 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 57/96 (59%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FL+ HN +IA E +GTI V V+ R ++QR L +A +++L HNHPS N PS AD Sbjct: 54 FLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTAPSQADKL 113 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH+I+G SF +I Sbjct: 114 ITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGLI 149 >gi|323157677|gb|EFZ43783.1| DNA repair RadC family protein [Escherichia coli EPECa14] Length = 253 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 35/86 (40%), Positives = 54/86 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKD 86 +T+ ++ L ++I V DH+I+G Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGS 147 >gi|296444788|ref|ZP_06886751.1| DNA repair protein RadC [Methylosinus trichosporium OB3b] gi|296257736|gb|EFH04800.1| DNA repair protein RadC [Methylosinus trichosporium OB3b] Length = 241 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 58/97 (59%), Positives = 73/97 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N LIADEVQ GT+DH PVY RE+V+R LEL +T++IL HNHPSG+P PS AD+ Sbjct: 145 LFLDKRNALIADEVQGVGTVDHTPVYPREVVRRALELGSTALILAHNHPSGDPTPSTADV 204 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT +II P I VHDH+I+G++ S KGL++I Sbjct: 205 RMTLDIIAIAQPFGIAVHDHLIVGRNGHSSLKGLKLI 241 >gi|78046671|ref|YP_362846.1| RadC family DNA repair protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035101|emb|CAJ22746.1| RadC family DNA repair protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 159 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 56/96 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E GT D V+ R + +R LEL+A ++IL HNHPSGNP PS+AD Sbjct: 63 VFLDTKHHILATEHLFTGTTDACEVHSRVVAKRALELNAVAVILFHNHPSGNPEPSEADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + L L+I V DH++IG S Sbjct: 123 KVTKRLEQALGLLDIRVLDHLVIGGRQHTSLAARGW 158 >gi|302333327|gb|ADL23520.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JKD6159] Length = 228 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ PS DI Sbjct: 128 LLLNSKNVVIKESCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG + F S Sbjct: 188 LTTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223 >gi|320539885|ref|ZP_08039544.1| protein associated with replication fork, possible DNA repair protein [Serratia symbiotica str. Tucson] gi|320030071|gb|EFW12091.1| protein associated with replication fork, possible DNA repair protein [Serratia symbiotica str. Tucson] Length = 227 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I + GTI V V+ REIV+ L+ +A +IIL HNHPSG PS AD Sbjct: 131 LFLDNQHRVIRHQEMFAGTISSVVVHPREIVRAALKANAAAIILAHNHPSGKAEPSHADR 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I L I V DH++IG+ VSF + Sbjct: 191 VITEQVINACLLLKIRVLDHLVIGRGECVSFAERGWL 227 >gi|289661519|ref|ZP_06483100.1| DNA repair protein RadC [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 156 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 57/95 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + LI +GT++ VY+RE+ ++ L+L+A ++I+ HNHPS +P PS D+ Sbjct: 60 IFLDHRHQLIEYAEMFQGTLNEAQVYMREVARKALQLNAAAVIVSHNHPSADPAPSWPDV 119 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 MT+ + L + + + DHI++G + VS Sbjct: 120 VMTKRLREVLELVEVRLLDHIVVGGNRTVSMAAAG 154 >gi|254805054|ref|YP_003083275.1| DNA repair protein RadC [Neisseria meningitidis alpha14] gi|254668596|emb|CBA06141.1| DNA repair protein RadC [Neisseria meningitidis alpha14] Length = 225 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ +YIREIV+ L+ A S+I+ HNHP G+P PS DI Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + ++ +++ + DH I+ + SF+ L ++ Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQSVCSFRQLGLM 224 >gi|118444603|ref|YP_877766.1| DNA repair protein RadC [Clostridium novyi NT] gi|166218779|sp|A0PZG4|Y1687_CLONN RecName: Full=UPF0758 protein NT01CX_1687 gi|118135059|gb|ABK62103.1| DNA repair protein [Clostridium novyi NT] Length = 228 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ NI+I+ + S G+++ V+ RE+ L+ ++ SI++ HNHPSG+P PS DI Sbjct: 132 IMLNTKNIVISCKDVSIGSLNSAIVHPREVFCEALKKNSASIVICHNHPSGDPTPSSEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ + L I + DH+IIG ++S K I+ Sbjct: 192 NVTKRLKQCGIILGINLLDHLIIGHSNYISLKEKNIL 228 >gi|309781502|ref|ZP_07676238.1| DNA repair protein RadC [Ralstonia sp. 5_7_47FAA] gi|308919915|gb|EFP65576.1| DNA repair protein RadC [Ralstonia sp. 5_7_47FAA] Length = 224 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 39/94 (41%), Positives = 58/94 (61%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FLD + LIA E RGT+ VY REI +R L +A ++IL HNHP+GN PS++D+ Sbjct: 129 FLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDVI 188 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + L L++IV DH+I+G++ F Sbjct: 189 LTRELRRALAMLDVIVLDHMIVGRNHVYGFLEHG 222 >gi|282916921|ref|ZP_06324679.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus D139] gi|283770726|ref|ZP_06343618.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus H19] gi|282319408|gb|EFB49760.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus D139] gi|283460873|gb|EFC07963.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus H19] Length = 228 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ PS DI Sbjct: 128 LLLNSKNVVIKESCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG + F S Sbjct: 188 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223 >gi|27383464|ref|NP_774994.1| hypothetical protein pCTX-M3_035 [Citrobacter freundii] gi|27261317|gb|AAN87658.1| putative protein [Citrobacter freundii] Length = 149 Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 57/96 (59%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FL+ HN +IA E +GTI V V+ R ++QR L +A +++L HNHPS N PS AD Sbjct: 54 FLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTAPSQADKL 113 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH+I+G SF +I Sbjct: 114 ITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGLI 149 >gi|294054448|ref|YP_003548106.1| DNA repair protein RadC [Coraliomargarita akajimensis DSM 45221] gi|293613781|gb|ADE53936.1| DNA repair protein RadC [Coraliomargarita akajimensis DSM 45221] Length = 239 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 7/104 (6%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD+ N L+ + S GT RE+ + + L+AT+II HNHPSG+P PS ADI Sbjct: 136 LCLDRKNRLLREFEVSSGTATAALASPREVYREAIRLNATAIIAAHNHPSGDPAPSRADI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-------KDAFVSFKGLRII 97 +T+ + L + + DH+I+G + SF +I Sbjct: 196 QVTRQLREAGKALQVELLDHVILGQPGKDPQGLGYYSFNDAGLI 239 >gi|225847877|ref|YP_002728040.1| DNA repair protein RadC [Sulfurihydrogenibium azorense Az-Fu1] gi|225643861|gb|ACN98911.1| DNA repair protein RadC [Sulfurihydrogenibium azorense Az-Fu1] Length = 229 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N LIA EV ++G+++ V V R+I+ L+ + II+ HNHP+G+ PS+ DI Sbjct: 133 IYLNSSNELIAKEVIAKGSLNVVRVLPRDILYYGLKHNCNGIIIAHNHPNGSSKPSEEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N T+ + + + DHII+GK+ + SF +I Sbjct: 193 NFTKKLSQLALEMGFELLDHIIVGKNDYFSFAEKGLI 229 >gi|167745627|ref|ZP_02417754.1| hypothetical protein ANACAC_00319 [Anaerostipes caccae DSM 14662] gi|317472772|ref|ZP_07932083.1| DNA repair protein RadC [Anaerostipes sp. 3_2_56FAA] gi|167654939|gb|EDR99068.1| hypothetical protein ANACAC_00319 [Anaerostipes caccae DSM 14662] gi|316899691|gb|EFV21694.1| DNA repair protein RadC [Anaerostipes sp. 3_2_56FAA] Length = 232 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + + N +I + S GT++ RE+ L+ A +IL+HNHPSG+P PS D+ Sbjct: 136 ILFNGKNKVIKELKVSVGTVNQTVASPREVFLEALKYEAVYLILLHNHPSGDPTPSRQDV 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ I L I + DHIIIG ++VSFK +++ Sbjct: 196 SVTKRIKEAGELLGIYLSDHIIIGDRSYVSFKEQQLL 232 >gi|216967844|ref|YP_002333352.1| hypothetical protein pCTXM360_p71 [Klebsiella pneumoniae] gi|215398016|gb|ACJ65293.1| hypothetical protein [Klebsiella pneumoniae] Length = 149 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 57/96 (59%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FL+ HN +IA E +GTI V V+ R ++QR L +A +++L HNHPS N PS AD Sbjct: 54 FLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTAPSQADKL 113 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DH+I+G SF +I Sbjct: 114 ITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGLI 149 >gi|329896524|ref|ZP_08271582.1| DNA repair protein RadC [gamma proteobacterium IMCC3088] gi|328921741|gb|EGG29114.1| DNA repair protein RadC [gamma proteobacterium IMCC3088] Length = 210 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N ++ + GT+D VY REIV L++ A +II+ HNHPSG+ PSDAD Sbjct: 114 LYLDVRNQVLKVDTLFSGTVDAASVYPREIVSTALQVGAVNIIIAHNHPSGSSQPSDADH 173 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH+++G+ F SF + Sbjct: 174 RVTEKVRQALGLVDICLLDHLVLGQGEFFSFAKAGFL 210 >gi|227872346|ref|ZP_03990699.1| possible DNA repair protein RadC [Oribacterium sinus F0268] gi|227841810|gb|EEJ52087.1| possible DNA repair protein RadC [Oribacterium sinus F0268] Length = 229 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD L+ D + S+G+ + + REI L ++ ILVHNHPSG+P+PS D Sbjct: 133 LFLDTKAQLLKDFLLSKGSSNASILSGREIFMEALRAASVCFILVHNHPSGDPHPSREDE 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I L I + DHIIIG + + SFK I Sbjct: 193 RATEEIYKAGEYLGIHLMDHIIIGDNQYYSFKEQGKI 229 >gi|206603634|gb|EDZ40114.1| DNA repair protein (RadC) [Leptospirillum sp. Group II '5-way CG'] Length = 237 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 52/95 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD+ + L S G++ V+ RE Q + SA +++ VHNHPSG+P PS D Sbjct: 135 LLLDQRHRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDPEPSSDDW 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 ++T+ + L I V DH+++G A+VS + Sbjct: 195 SLTERLKECGELLGIRVLDHVVLGDHAWVSLEERG 229 >gi|163814086|ref|ZP_02205478.1| hypothetical protein COPEUT_00239 [Coprococcus eutactus ATCC 27759] gi|158450535|gb|EDP27530.1| hypothetical protein COPEUT_00239 [Coprococcus eutactus ATCC 27759] Length = 264 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L D + LI D S GT++ + RE+ + L+ A IILVHNHPSG+P PS DI Sbjct: 160 LMFDSKHKLIKDVRISEGTVNSSMLSPREVFVQALKYEAVFIILVHNHPSGDPTPSGEDI 219 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T I + + I + DHII+G + +VS I Sbjct: 220 DITYRISDAGSMIGIDLSDHIILGNNCYVSLAERGI 255 >gi|238020847|ref|ZP_04601273.1| hypothetical protein GCWU000324_00742 [Kingella oralis ATCC 51147] gi|237867827|gb|EEP68833.1| hypothetical protein GCWU000324_00742 [Kingella oralis ATCC 51147] Length = 230 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD +N L+A E +RGT+ Y REI + L+ A ++I HNHPSG+ PS AD Sbjct: 128 LFLDANNHLLAAEEIARGTLSESVAYPREIARFALQHHAAAVIFAHNHPSGSLKPSPADF 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 TQ + L L+I++ DHII+ A VSF + Sbjct: 188 AFTQRLHAALALLDIVLLDHIIVTAAATVSFTQQGWL 224 >gi|227484623|ref|ZP_03914939.1| DNA repair protein RadC [Anaerococcus lactolyticus ATCC 51172] gi|227237343|gb|EEI87358.1| DNA repair protein RadC [Anaerococcus lactolyticus ATCC 51172] Length = 226 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I+ E+ S G + V RE+ + ++ SA S+IL HNHPSGNP+PS AD+ Sbjct: 130 ILLNNKNEVISKELISIGDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSGNPSPSKADL 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I L+I V DH+IIG +VS K I Sbjct: 190 LITHRLIDAGEILDITVLDHLIIGHGTYVSLKKDNYI 226 >gi|329954884|ref|ZP_08295901.1| DNA repair protein RadC [Bacteroides clarus YIT 12056] gi|328526988|gb|EGF53999.1| DNA repair protein RadC [Bacteroides clarus YIT 12056] Length = 148 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ N ++ + S G I V +R I+Q L ++ +IIL HNHPSGN PS D+ Sbjct: 52 LFLNQSNQVLGYTLISEGGITDTTVDVRVILQAALLTNSVAIILAHNHPSGNTKPSRQDM 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I V DH+I+ + SF + Sbjct: 112 EITKQVKEAARLMRITVTDHLILTDAGYYSFADEGQL 148 >gi|187736713|ref|YP_001840970.1| hypothetical protein pEspB_p16 [Exiguobacterium arabatum] gi|183223746|emb|CAQ35231.1| hypothetical protein [Exiguobacterium arabatum] Length = 249 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I G+++ V+ REI + + +A+ II H HPSG+P+PS DI Sbjct: 151 IMLNTKNRVIGVHRAHVGSVNSSVVHPREIFKCAILNNASCIIACHQHPSGDPSPSREDI 210 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 +++ + + + I V DH+I+G +++VS K + Sbjct: 211 LVSERLHEAGDLIGIPVLDHLILGADESYVSMKQRGYM 248 >gi|167569090|ref|ZP_02361964.1| DNA repair protein RadC [Burkholderia oklahomensis C6786] Length = 221 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 125 LFLDARHRLLRTEETAHGSLTRMAVYPREIVRRALSLNAAALIVAHNHPSGAVRPSAADR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH ++G + SF I Sbjct: 185 RLTRVLRDALALIDVRLMDHFVVGANDTFSFAQAGWI 221 >gi|227535259|ref|ZP_03965308.1| DNA repair protein (RadC) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187143|gb|EEI67210.1| DNA repair protein (RadC) [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 229 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 57/92 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +I +++ + GT+D R + + L+LSAT++I+VHNHPSG+P+PS AD Sbjct: 131 LFLDVKNQIITEQIAAIGTVDSAMADPRIVFREALKLSATNLIMVHNHPSGDPSPSQADR 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 + T L + + DH+I+G + + SF Sbjct: 191 DTTTRFQLAAALLGMHLIDHLIVGGERYYSFA 222 >gi|331269058|ref|YP_004395550.1| DNA repair protein [Clostridium botulinum BKT015925] gi|329125608|gb|AEB75553.1| DNA repair protein [Clostridium botulinum BKT015925] Length = 221 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ NI+IA + S G+++ V+ REI ++ ++ SII+ HNHPSG PS DI Sbjct: 125 IMLNTKNIVIACKDISIGSLNSTIVHPREIFSYAIKKNSASIIICHNHPSGVCTPSSEDI 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T + L + + DH+IIG ++S K I+ Sbjct: 185 DVTIRLKKCSEILGVNLLDHLIIGHGNYISLKEKNIL 221 >gi|254420570|ref|ZP_05034294.1| DNA repair protein RadC [Brevundimonas sp. BAL3] gi|196186747|gb|EDX81723.1| DNA repair protein RadC [Brevundimonas sp. BAL3] Length = 192 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 45/97 (46%), Positives = 72/97 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ NIL+ DE+ + G++DH PVY RE+++R LELSA+++IL+HNHPSG+P PS ADI Sbjct: 96 LYLDRRNILMRDELVADGSVDHAPVYPREVIRRALELSASALILLHNHPSGDPAPSQADI 155 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + VHDH+I+G++ S + L ++ Sbjct: 156 VVTKQVVDAAKLFGLQVHDHLIVGREGTASLRALGLV 192 >gi|15676925|ref|NP_274072.1| DNA repair protein RadC [Neisseria meningitidis MC58] gi|304387460|ref|ZP_07369651.1| DNA repair protein RadC [Neisseria meningitidis ATCC 13091] gi|13431810|sp|Q9JZI3|Y1038_NEIMB RecName: Full=UPF0758 protein NMB1038 gi|7226278|gb|AAF41437.1| DNA repair protein RadC [Neisseria meningitidis MC58] gi|304338553|gb|EFM04672.1| DNA repair protein RadC [Neisseria meningitidis ATCC 13091] gi|308389364|gb|ADO31684.1| putative DNA repair protein [Neisseria meningitidis alpha710] gi|325128326|gb|EGC51210.1| DNA repair protein RadC [Neisseria meningitidis N1568] gi|325130285|gb|EGC53052.1| DNA repair protein RadC [Neisseria meningitidis OX99.30304] gi|325202038|gb|ADY97492.1| DNA repair protein RadC [Neisseria meningitidis M01-240149] gi|325204253|gb|ADY99706.1| DNA repair protein RadC [Neisseria meningitidis M01-240355] gi|325208209|gb|ADZ03661.1| DNA repair protein RadC [Neisseria meningitidis NZ-05/33] Length = 225 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ +YIREIV+ L+ A S+I+ HNHP G+P PS DI Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + ++ +++ + DH I+ + SF+ L ++ Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQSVCSFRQLGLM 224 >gi|329733266|gb|EGG69603.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 21193] Length = 228 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ PS DI Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG + F S Sbjct: 188 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223 >gi|21283333|ref|NP_646421.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus MW2] gi|49486487|ref|YP_043708.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus MSSA476] gi|57650533|ref|YP_186546.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus COL] gi|151221767|ref|YP_001332589.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus str. Newman] gi|253317195|ref|ZP_04840408.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|258443688|ref|ZP_05692027.1| DNA repair protein RadC [Staphylococcus aureus A8115] gi|282893157|ref|ZP_06301391.1| DNA repair protein radC [Staphylococcus aureus A8117] gi|282920202|ref|ZP_06327927.1| DNA repair protein radC [Staphylococcus aureus A9765] gi|284024710|ref|ZP_06379108.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 132] gi|294848683|ref|ZP_06789429.1| DNA repair protein radC [Staphylococcus aureus A9754] gi|297207625|ref|ZP_06924060.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911707|ref|ZP_07129151.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus TCH70] gi|25009019|sp|Q8NW77|Y1604_STAAW RecName: Full=UPF0758 protein MW1604 gi|54036222|sp|Q6G8R5|Y1589_STAAS RecName: Full=UPF0758 protein SAS1589 gi|81694333|sp|Q5HFB1|Y1707_STAAC RecName: Full=UPF0758 protein SACOL1707 gi|229485562|sp|A6QHJ5|Y1555_STAAE RecName: Full=UPF0758 protein NWMN_1555 gi|21204773|dbj|BAB95469.1| MW1604 [Staphylococcus aureus subsp. aureus MW2] gi|49244930|emb|CAG43391.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus MSSA476] gi|57284719|gb|AAW36813.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus COL] gi|150374567|dbj|BAF67827.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus str. Newman] gi|257851094|gb|EEV75037.1| DNA repair protein RadC [Staphylococcus aureus A8115] gi|282594550|gb|EFB99535.1| DNA repair protein radC [Staphylococcus aureus A9765] gi|282764475|gb|EFC04601.1| DNA repair protein radC [Staphylococcus aureus A8117] gi|294824709|gb|EFG41132.1| DNA repair protein radC [Staphylococcus aureus A9754] gi|296887642|gb|EFH26540.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300887128|gb|EFK82329.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus TCH70] gi|312830039|emb|CBX34881.1| DNA repair protein RadC family protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315198645|gb|EFU28973.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus CGS01] gi|320140460|gb|EFW32314.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus MRSA131] gi|320143999|gb|EFW35768.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus MRSA177] gi|329728423|gb|EGG64860.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 21189] Length = 228 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ PS DI Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG + F S Sbjct: 188 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223 >gi|253732311|ref|ZP_04866476.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734554|ref|ZP_04868719.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus TCH130] gi|257425777|ref|ZP_05602201.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 55/2053] gi|257433760|ref|ZP_05610118.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus E1410] gi|257436676|ref|ZP_05612720.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus M876] gi|282914458|ref|ZP_06322244.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus M899] gi|282919427|ref|ZP_06327162.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus C427] gi|282924804|ref|ZP_06332470.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus C101] gi|293510550|ref|ZP_06669255.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus M809] gi|253723949|gb|EES92678.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727495|gb|EES96224.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus TCH130] gi|257271471|gb|EEV03617.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 55/2053] gi|257281853|gb|EEV11990.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus E1410] gi|257284027|gb|EEV14150.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus M876] gi|282313170|gb|EFB43566.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus C101] gi|282317237|gb|EFB47611.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus C427] gi|282321639|gb|EFB51964.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus M899] gi|283470928|emb|CAQ50139.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ST398] gi|291466441|gb|EFF08962.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus M809] gi|312437880|gb|ADQ76951.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus TCH60] Length = 228 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ PS DI Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG + F S Sbjct: 188 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223 >gi|146310139|ref|YP_001175213.1| DNA repair protein RadC [Enterobacter sp. 638] gi|145317015|gb|ABP59162.1| DNA repair protein RadC [Enterobacter sp. 638] Length = 157 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + L+ E GT++H V+ RE+V+ L +A ++I+ HNHPSG + S AD Sbjct: 61 MYLDNQHCLLERETLFAGTLNHTEVHAREVVKSALRHNAAAVIIAHNHPSGTTDISKADR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L+ + + + DH+++G VSF + Sbjct: 121 VVTERIADALSLVEVRLLDHLVVGGCDVVSFAECGWL 157 >gi|239623991|ref|ZP_04667022.1| DNA repair protein RadC [Clostridiales bacterium 1_7_47_FAA] gi|239522022|gb|EEQ61888.1| DNA repair protein RadC [Clostridiales bacterium 1_7_47FAA] Length = 231 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ LI D + SRGT++ + REI+ L A S++LVHNHPSG+P+PS AD+ Sbjct: 135 MFLNTKQGLIKDLLISRGTVNASVMTPREILIEALRCCAVSMVLVHNHPSGDPSPSRADL 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I + DHIIIG ++SF+ +I+ Sbjct: 195 MLTERVKEAGVLIGITLIDHIIIGDRRYLSFREQKIL 231 >gi|162147769|ref|YP_001602230.1| putative DNA repair protein radC [Gluconacetobacter diazotrophicus PAl 5] gi|209542391|ref|YP_002274620.1| DNA repair protein RadC [Gluconacetobacter diazotrophicus PAl 5] gi|161786346|emb|CAP55928.1| putative DNA repair protein radC [Gluconacetobacter diazotrophicus PAl 5] gi|209530068|gb|ACI50005.1| DNA repair protein RadC [Gluconacetobacter diazotrophicus PAl 5] Length = 221 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 65/97 (67%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ LIADEV ++GTID PVY RE+++R ++L A+ +ILVHNHP NP PS DI Sbjct: 125 LFLDRGTRLIADEVLAQGTIDQTPVYPREVMRRAIQLKASELILVHNHPGWNPTPSREDI 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + L + V DH+I+G A +SF+ ++ Sbjct: 185 AMTRRLAQIATVLGLTVRDHVIVGNGASISFRQAGLL 221 >gi|229002805|ref|ZP_04160699.1| DNA repair protein [Bacillus mycoides Rock3-17] gi|228758442|gb|EEM07595.1| DNA repair protein [Bacillus mycoides Rock3-17] Length = 150 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 36/95 (37%), Positives = 55/95 (57%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +I + RGT+D V+ RE + + +ATSI+ HNHPSG+ S DI + Sbjct: 56 LNTKNEIIGCSIVFRGTVDSSLVHARETFRTAILNNATSILCFHNHPSGSSVESSEDIEV 115 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + + I + DH+IIG ++FVS K II Sbjct: 116 TKRLKECGDIIGIPLLDHVIIGDNSFVSLKSKGII 150 >gi|312170956|emb|CBX79215.1| DNA repair protein radC homolog [Erwinia amylovora ATCC BAA-2158] Length = 107 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + L+ E GT+ H V+ RE+V+ L+ +A ++IL HNHPSG S D Sbjct: 12 MYLDNQHCLLGCETLFTGTLSHTEVHPREVVKLALKHNAAAVILAHNHPSGTREISQQDK 71 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ I+ L + + V DH+++G + VSF ++ Sbjct: 72 HITQRIVKALALVEVRVLDHLVVG-NEVVSFAEQGLL 107 >gi|300811346|ref|ZP_07091843.1| DNA repair protein RadC [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497710|gb|EFK32735.1| DNA repair protein RadC [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 204 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 52/96 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+ D+ L+ +++ +GT+D V+ REI + + SII+ HNHPSG PSD D+ Sbjct: 108 LYFDQQQNLLGEKMLFQGTLDRSWVHPREIFRWAMVYGCASIIVAHNHPSGALTPSDNDL 167 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + + I DH IIG ++S + + Sbjct: 168 ELTKGLKKASKIMKITFLDHFIIGGGEYLSLREREL 203 >gi|68248652|ref|YP_247764.1| putative DNA repair radC-like protein [Haemophilus influenzae 86-028NP] gi|68056851|gb|AAX87104.1| putative DNA repair radC-like protein [Haemophilus influenzae 86-028NP] gi|309750579|gb|ADO80563.1| putative DNA repair protein [Haemophilus influenzae R2866] Length = 156 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ + LI EV +G++ V IREI+++ L+L+A++II+ HNHP+GN PSDAD Sbjct: 60 LFLDRIHRLIKSEVMFQGSVSETSVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + ++I + DH I+ A F +I Sbjct: 120 YITKRLKEACELMDIKLLDHFIVSGSASFCFTDNHLI 156 >gi|255308168|ref|ZP_05352339.1| DNA repair protein RadC [Clostridium difficile ATCC 43255] Length = 153 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N ++ E+ S GT++ V+ RE+ + + +A+ II HNHPSGN N S D Sbjct: 56 VYLDTKNQPVSIEIVSIGTVNSAMVHPREVFKVAVLSNASKIICFHNHPSGNTNFSKEDE 115 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGL 94 +T+ + L I + DHI++G D + SFK Sbjct: 116 VITKRLQKCGEILGIELVDHIVVGDDDKYFSFKEN 150 >gi|325136246|gb|EGC58854.1| DNA repair protein RadC [Neisseria meningitidis M0579] Length = 225 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ +YIREIV+ L+ A S+I+ HNHP G+P PS DI Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + ++ +++ + DH I+ + SF+ L ++ Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQSVCSFRQLGLM 224 >gi|254995210|ref|ZP_05277400.1| DNA repair protein (radC) [Anaplasma marginale str. Mississippi] Length = 230 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 65/97 (67%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+K +IADE+Q+ GTID P+Y+RE+V++ L A+ I++ HNHPSG+P PS ADI Sbjct: 134 LYLNKKYRIIADEIQNTGTIDEAPLYVREVVKKSLLHDASYIVVSHNHPSGDPKPSKADI 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T + +NI++ DH+II SFK ++ Sbjct: 194 HITNRLQEACCSMNIVLVDHVIITPKRHYSFKTNGLL 230 >gi|330993528|ref|ZP_08317463.1| UPF0758 protein [Gluconacetobacter sp. SXCC-1] gi|329759558|gb|EGG76067.1| UPF0758 protein [Gluconacetobacter sp. SXCC-1] Length = 223 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ L+ADE+ GT++H PVY REI++R L L A ++L HNHP+G PS ADI Sbjct: 126 LFLDEGFHLLADELMGTGTVNHSPVYPREIMRRALRLGAARLVLAHNHPAGRAEPSGADI 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I + + VHDHII+G +SF+ ++ Sbjct: 186 EMTLRIAQLGRLMRVEVHDHIIVGNGRTLSFRAAGLL 222 >gi|258542143|ref|YP_003187576.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01] gi|256633221|dbj|BAH99196.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01] gi|256636280|dbj|BAI02249.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-03] gi|256639333|dbj|BAI05295.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-07] gi|256642389|dbj|BAI08344.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-22] gi|256645444|dbj|BAI11392.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-26] gi|256648497|dbj|BAI14438.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-32] gi|256651550|dbj|BAI17484.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654541|dbj|BAI20468.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-12] Length = 249 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 64/97 (65%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ + L+AD+V +GT+DH PVY REIV R L+L+AT ++LVHNHPSG+P PS D+ Sbjct: 153 LFLNDKHELLADDVMGQGTVDHTPVYPREIVARALQLNATMLVLVHNHPSGDPTPSADDV 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I +NI V DHII+ + +S + + Sbjct: 213 VMTTQICGAAKIMNIHVWDHIIVAGEKLLSMREAGFL 249 >gi|116494746|ref|YP_806480.1| DNA repair protein [Lactobacillus casei ATCC 334] gi|116104896|gb|ABJ70038.1| DNA replication and repair protein RadC [Lactobacillus casei ATCC 334] Length = 222 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 57/92 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +I +++ + GT+D R + + L+LSAT++I+VHNHPSG+P+PS AD Sbjct: 124 LFLDVKNQIITEQIAAIGTVDSAMADPRIVFREALKLSATNLIMVHNHPSGDPSPSQADR 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 + T L + + DH+I+G + + SF Sbjct: 184 DTTTRFQLAAALLGMHLIDHLIVGGERYYSFA 215 >gi|325684339|gb|EGD26508.1| DNA repair protein RadC [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 206 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 52/96 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+ D+ L+ +++ +GT+D V+ REI + + SII+ HNHPSG PSD D+ Sbjct: 110 LYFDQQQNLLGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDL 169 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + + I DH IIG ++S + + Sbjct: 170 ELTKGLKKASKIMKITFLDHFIIGGGEYLSLREREL 205 >gi|161509879|ref|YP_001575538.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|160368688|gb|ABX29659.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus USA300_TCH1516] Length = 223 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ PS DI Sbjct: 123 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG + F S Sbjct: 183 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 218 >gi|319956638|ref|YP_004167901.1| DNA replication and repair protein radc [Nitratifractor salsuginis DSM 16511] gi|319419042|gb|ADV46152.1| DNA replication and repair protein RadC [Nitratifractor salsuginis DSM 16511] Length = 219 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 47/95 (49%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + +I GT++ V+ RE+ + A II+ HNHPSG PS DI + Sbjct: 125 LDGASRVIEVRTVFIGTLNQSLVHPREVFADAIADRAAGIIVAHNHPSGTLTPSRPDIAI 184 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + + I + DH+I+ K+ + SF ++ Sbjct: 185 TDRLKEVGRLVGIDLLDHVILTKEGYFSFADEGML 219 >gi|167561868|ref|ZP_02354784.1| DNA repair protein RadC [Burkholderia oklahomensis EO147] Length = 173 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 77 LFLDARHRLLRMEETAHGSLTRMAVYPREIVRRALSLNAAALIVAHNHPSGAVRPSAADR 136 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH ++G SF I Sbjct: 137 RLTRVLRDALALIDVRLMDHFVVGASDTFSFAQAGWI 173 >gi|255067544|ref|ZP_05319399.1| DNA repair protein RadC [Neisseria sicca ATCC 29256] gi|255048165|gb|EET43629.1| DNA repair protein RadC [Neisseria sicca ATCC 29256] Length = 226 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ VYIREIV+ L+ A S+I+ HNHP G+ PS +DI Sbjct: 128 LLLNRQNRLIAMRELSRGTVAENTVYIREIVKLALDEYADSLIIAHNHPGGSATPSQSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + L +++ + DH I+ S + + Sbjct: 188 AFTGRLKQALALVDVSLLDHFIVTAKEVCSMRERGYM 224 >gi|253681762|ref|ZP_04862559.1| DNA repair protein RadC [Clostridium botulinum D str. 1873] gi|253561474|gb|EES90926.1| DNA repair protein RadC [Clostridium botulinum D str. 1873] Length = 228 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ NI+I S G+++ V+ RE+ ++ ++ SII+ HNHPSG PS DI Sbjct: 132 IMLNTKNIVIDCRDVSIGSLNSTIVHPREVFSYAIKKNSASIIICHNHPSGVCTPSSEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L + + DH+IIG ++S K I+ Sbjct: 192 DVTKRLKKCSEILGVNLLDHLIIGHGNYISLKEKNIL 228 >gi|28211693|ref|NP_782637.1| DNA repair protein RadC [Clostridium tetani E88] gi|54036238|sp|Q892M1|Y2075_CLOTE RecName: Full=UPF0758 protein CTC_02075 gi|28204135|gb|AAO36574.1| DNA repair protein radC [Clostridium tetani E88] Length = 228 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I + G+++ V+ REI ++ ++ SII+ HNHPSG+ PS DI Sbjct: 132 ILLNTKNYVIKVKDVFIGSLNSSIVHPREIFLEAIKNNSYSIIICHNHPSGDTTPSKEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N++ I + I + DHIIIG ++S K I+ Sbjct: 192 NVSNRIKECGKLIGIELLDHIIIGNGVYISLKEKDIL 228 >gi|191638257|ref|YP_001987423.1| DNA repair protein (RadC) [Lactobacillus casei BL23] gi|239631658|ref|ZP_04674689.1| DNA repair protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066305|ref|YP_003788328.1| DNA repair protein [Lactobacillus casei str. Zhang] gi|190712559|emb|CAQ66565.1| DNA repair protein (RadC) [Lactobacillus casei BL23] gi|239526123|gb|EEQ65124.1| DNA repair protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438712|gb|ADK18478.1| DNA repair protein [Lactobacillus casei str. Zhang] gi|327382289|gb|AEA53765.1| DNA repair protein RadC [Lactobacillus casei LC2W] gi|327385484|gb|AEA56958.1| DNA repair protein RadC [Lactobacillus casei BD-II] Length = 222 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 57/92 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N +I +++ + GT+D R + + L+LSAT++I+VHNHPSG+P+PS AD Sbjct: 124 LFLDVKNQIITEQIAAIGTVDSAMADPRIVFREALKLSATNLIMVHNHPSGDPSPSQADR 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 + T L + + DH+I+G + + SF Sbjct: 184 DTTTRFQLAAALLGMHLIDHLIVGGERYYSFA 215 >gi|104773814|ref|YP_618794.1| DNA repair protein RadC [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513820|ref|YP_812726.1| DNA repair protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103422895|emb|CAI97557.1| DNA repair protein RadC [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093135|gb|ABJ58288.1| DNA repair protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125478|gb|ADY84808.1| DNA repair protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 204 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 52/96 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+ D+ L+ +++ +GT+D V+ REI + + SII+ HNHPSG PSD D+ Sbjct: 108 LYFDQQQNLLGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDL 167 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + + I DH IIG ++S + + Sbjct: 168 ELTKGLKKASKIMKITFLDHFIIGGGEYLSLREREL 203 >gi|256827872|ref|YP_003156600.1| DNA repair protein RadC [Desulfomicrobium baculatum DSM 4028] gi|256577048|gb|ACU88184.1| DNA repair protein RadC [Desulfomicrobium baculatum DSM 4028] Length = 226 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + +D N LI+ E +GT+D Y REI++ L A +ILVHNHP GNP PS D Sbjct: 130 ILVDNQNRLISFERVFQGTVDQTAAYPREILELALRHHAGGLILVHNHPGGNPVPSSQDK 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + L + + DHII+ + + SF+ ++ Sbjct: 190 ALTETIARLADDLGLRLLDHIIVTAETYSSFRAQGLL 226 >gi|225027645|ref|ZP_03716837.1| hypothetical protein EUBHAL_01904 [Eubacterium hallii DSM 3353] gi|224954959|gb|EEG36168.1| hypothetical protein EUBHAL_01904 [Eubacterium hallii DSM 3353] Length = 242 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + L+ + + S+GT + V +R I L A +IL+HNHPSG P PS D+ Sbjct: 146 LLLDGRHRLMKEILLSKGTANSSWVPVRTIFVEALRYEAVYMILIHNHPSGCPEPSREDL 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L I + DHIIIG + S + +++ Sbjct: 206 VITKQIKEAGELLGIPLSDHIIIGDKCYTSLREQQMM 242 >gi|124516759|gb|EAY58267.1| DNA repair protein (RadC) [Leptospirillum rubarum] Length = 237 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 52/95 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD+ + L S G++ V+ RE Q + SA +++ VHNHPSG+P PS D Sbjct: 135 LLLDQRHRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDPEPSSDDW 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 ++T+ + L I V DH+++G A+VS + Sbjct: 195 SLTERLKECGELLGIRVLDHVVLGDHAWVSLEERG 229 >gi|228931411|ref|ZP_04094336.1| DNA repair protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228828217|gb|EEM73927.1| DNA repair protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 150 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 53/95 (55%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +I + GT+D V+ RE + + +A+SII HNHPSG+ S D+ + Sbjct: 56 LNTKNEIIGCSIVFEGTVDSSLVHPRETFRTAILNNASSIICFHNHPSGHSMESHEDVEV 115 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + N + I + DH+IIG +++VS II Sbjct: 116 TKRLKECGNIIGIPLLDHVIIGDNSYVSLMKKGII 150 >gi|313123429|ref|YP_004033688.1| DNA repair protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279992|gb|ADQ60711.1| DNA repair protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 204 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 52/96 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+ D+ L+ +++ +GT+D V+ REI + + SII+ HNHPSG PSD D+ Sbjct: 108 LYFDQQQNLLGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDL 167 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + + I DH IIG ++S + + Sbjct: 168 ELTKGLKKASKIMKITFLDHFIIGGGEYLSLREREL 203 >gi|298694931|gb|ADI98153.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ED133] Length = 228 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ PS DI Sbjct: 128 LLLNSKNVVIKESCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG + F S Sbjct: 188 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223 >gi|293604225|ref|ZP_06686633.1| DNA repair protein RadC [Achromobacter piechaudii ATCC 43553] gi|292817450|gb|EFF76523.1| DNA repair protein RadC [Achromobacter piechaudii ATCC 43553] Length = 225 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 52/95 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD +IA +RGT+ VY RE+V+ L A ++I+ HNHPSG PS AD Sbjct: 129 LYLDNQLRVIATGELARGTLSQASVYPREVVREALRHHAAALIVAHNHPSGLAEPSAADR 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 TQ + L +++ + DH+I+ A +S L Sbjct: 189 GFTQQLKQALALVDVKLVDHLIVAGAAVISMAELG 223 >gi|167752470|ref|ZP_02424597.1| hypothetical protein ALIPUT_00721 [Alistipes putredinis DSM 17216] gi|167659539|gb|EDS03669.1| hypothetical protein ALIPUT_00721 [Alistipes putredinis DSM 17216] Length = 214 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ + S+G + V R +++R LEL AT IILVHNHPSG PS+ D Sbjct: 117 LYLNTGNRIVERQRVSQGGVQATVVDHRLVIKRALELLATQIILVHNHPSGAALPSEQDK 176 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I +I + DH+II + SF+ ++ Sbjct: 177 ILTKKIAEAAALFDIRLLDHLIIARGGEYSFRQSGLL 213 >gi|222100114|ref|YP_002534682.1| DNA repair protein radC like protein [Thermotoga neapolitana DSM 4359] gi|221572504|gb|ACM23316.1| DNA repair protein radC like protein [Thermotoga neapolitana DSM 4359] Length = 209 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD+ ++++ V + GT D V+ R++ + + +A+ +I+VHNHPSG+P PS D Sbjct: 113 VCLDRRLNVLSESVITVGTSDRSLVHPRDVFRVAIRSNASGVIVVHNHPSGDPTPSKEDR 172 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+N+ L I + DH+II K + SF+ I Sbjct: 173 AITKNLKRVGEILGIELVDHVIISKRGYYSFREEGEI 209 >gi|187925122|ref|YP_001896764.1| DNA repair protein RadC [Burkholderia phytofirmans PsJN] gi|238689615|sp|B2T6H6|Y3148_BURPP RecName: Full=UPF0758 protein Bphyt_3148 gi|187716316|gb|ACD17540.1| DNA repair protein RadC [Burkholderia phytofirmans PsJN] Length = 259 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 58/96 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E ++GT+ + VY REIV+R L L+A S+I+ HNHPSG PS +D Sbjct: 163 LFLDARHRLIHCEESAQGTLTRMAVYPREIVRRALSLNAASLIVAHNHPSGAVQPSASDC 222 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T + L +++ + DH+++G D+ SF Sbjct: 223 RLTHTLRDALTLIDVQLVDHLVVGVDSVYSFARAGW 258 >gi|59801108|ref|YP_207820.1| DNA repair protein RadC [Neisseria gonorrhoeae FA 1090] gi|194098788|ref|YP_002001850.1| DNA repair protein RadC [Neisseria gonorrhoeae NCCP11945] gi|239999080|ref|ZP_04719004.1| DNA repair protein RadC [Neisseria gonorrhoeae 35/02] gi|240014013|ref|ZP_04720926.1| DNA repair protein RadC [Neisseria gonorrhoeae DGI18] gi|240016454|ref|ZP_04722994.1| DNA repair protein RadC [Neisseria gonorrhoeae FA6140] gi|240080573|ref|ZP_04725116.1| DNA repair protein RadC [Neisseria gonorrhoeae FA19] gi|240113058|ref|ZP_04727548.1| DNA repair protein RadC [Neisseria gonorrhoeae MS11] gi|240115813|ref|ZP_04729875.1| DNA repair protein RadC [Neisseria gonorrhoeae PID18] gi|240118111|ref|ZP_04732173.1| DNA repair protein RadC [Neisseria gonorrhoeae PID1] gi|240121579|ref|ZP_04734541.1| DNA repair protein RadC [Neisseria gonorrhoeae PID24-1] gi|240123661|ref|ZP_04736617.1| DNA repair protein RadC [Neisseria gonorrhoeae PID332] gi|240125851|ref|ZP_04738737.1| DNA repair protein RadC [Neisseria gonorrhoeae SK-92-679] gi|240128360|ref|ZP_04741021.1| DNA repair protein RadC [Neisseria gonorrhoeae SK-93-1035] gi|254493858|ref|ZP_05107029.1| DNA repair protein [Neisseria gonorrhoeae 1291] gi|260440370|ref|ZP_05794186.1| DNA repair protein RadC [Neisseria gonorrhoeae DGI2] gi|268594918|ref|ZP_06129085.1| DNA repair protein RadC [Neisseria gonorrhoeae 35/02] gi|268596703|ref|ZP_06130870.1| DNA repair protein RadC [Neisseria gonorrhoeae FA19] gi|268599142|ref|ZP_06133309.1| DNA repair protein RadC [Neisseria gonorrhoeae MS11] gi|268601488|ref|ZP_06135655.1| DNA repair protein RadC [Neisseria gonorrhoeae PID18] gi|268603826|ref|ZP_06137993.1| DNA repair protein RadC [Neisseria gonorrhoeae PID1] gi|268682290|ref|ZP_06149152.1| DNA repair protein RadC [Neisseria gonorrhoeae PID332] gi|268684448|ref|ZP_06151310.1| DNA repair protein [Neisseria gonorrhoeae SK-92-679] gi|268686758|ref|ZP_06153620.1| DNA repair protein RadC [Neisseria gonorrhoeae SK-93-1035] gi|291043667|ref|ZP_06569383.1| DNA repair protein RadC [Neisseria gonorrhoeae DGI2] gi|293398970|ref|ZP_06643135.1| DNA repair protein radC [Neisseria gonorrhoeae F62] gi|73913737|sp|Q5F8S9|Y681_NEIG1 RecName: Full=UPF0758 protein NGO0681 gi|238690211|sp|B4RM65|Y1225_NEIG2 RecName: Full=UPF0758 protein NGK_1225 gi|59718003|gb|AAW89408.1| putative DNA repair protein [Neisseria gonorrhoeae FA 1090] gi|193934078|gb|ACF29902.1| putative DNA repair protein [Neisseria gonorrhoeae NCCP11945] gi|226512898|gb|EEH62243.1| DNA repair protein [Neisseria gonorrhoeae 1291] gi|268548307|gb|EEZ43725.1| DNA repair protein RadC [Neisseria gonorrhoeae 35/02] gi|268550491|gb|EEZ45510.1| DNA repair protein RadC [Neisseria gonorrhoeae FA19] gi|268583273|gb|EEZ47949.1| DNA repair protein RadC [Neisseria gonorrhoeae MS11] gi|268585619|gb|EEZ50295.1| DNA repair protein RadC [Neisseria gonorrhoeae PID18] gi|268587957|gb|EEZ52633.1| DNA repair protein RadC [Neisseria gonorrhoeae PID1] gi|268622574|gb|EEZ54974.1| DNA repair protein RadC [Neisseria gonorrhoeae PID332] gi|268624732|gb|EEZ57132.1| DNA repair protein [Neisseria gonorrhoeae SK-92-679] gi|268627042|gb|EEZ59442.1| DNA repair protein RadC [Neisseria gonorrhoeae SK-93-1035] gi|291012130|gb|EFE04119.1| DNA repair protein RadC [Neisseria gonorrhoeae DGI2] gi|291610384|gb|EFF39494.1| DNA repair protein radC [Neisseria gonorrhoeae F62] gi|317164372|gb|ADV07913.1| DNA repair protein RadC [Neisseria gonorrhoeae TCDC-NG08107] Length = 225 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ +YIREIV+ L+ A S+I+ HNHP G+P PS DI Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + ++ +++ + DH I+ SF+ L ++ Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQTVRSFRQLGLM 224 >gi|87161721|ref|YP_494303.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195464|ref|YP_500268.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus NCTC 8325] gi|109940132|sp|P31337|Y1763_STAA8 RecName: Full=UPF0758 protein SAOUHSC_01763; AltName: Full=25 kDa protein gi|123485497|sp|Q2FG75|Y1608_STAA3 RecName: Full=UPF0758 protein SAUSA300_1608 gi|87127695|gb|ABD22209.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203022|gb|ABD30832.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] Length = 218 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ PS DI Sbjct: 118 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG + F S Sbjct: 178 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 213 >gi|32476078|ref|NP_869072.1| DNA repair protein [Rhodopirellula baltica SH 1] gi|32446622|emb|CAD76458.1| DNA repair protein [Rhodopirellula baltica SH 1] Length = 319 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 50/91 (54%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + I + GT+D V+ RE+ + + +A +++LVHNHPSG+P PS D + Sbjct: 228 LDTKHKPIRTHRITVGTLDSSLVHPREVFRPAIRDAAAAVLLVHNHPSGDPTPSREDHAV 287 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 T+ + + I V DHI++ K +S + Sbjct: 288 TERLTEAGKLIGITVLDHIVVAKQRCLSLRE 318 >gi|283769057|ref|ZP_06341963.1| putative DNA repair protein RadC [Bulleidia extructa W1219] gi|283104414|gb|EFC05791.1| putative DNA repair protein RadC [Bulleidia extructa W1219] Length = 223 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL +++ ++ GTI+ V+ REI + L L++ +IILVHNHPSGN +PS DI Sbjct: 127 VFLASDQRVLSYKILFVGTINASMVFPREIFKEALLLNSPNIILVHNHPSGNLSPSQEDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ I + + V DHII+ + + SF I Sbjct: 187 SLTKRIKEAGQLMGVKVLDHIIVTQSDYFSFVQEGI 222 >gi|149371609|ref|ZP_01891025.1| putative DNA repair protein [unidentified eubacterium SCB49] gi|149355236|gb|EDM43796.1| putative DNA repair protein [unidentified eubacterium SCB49] Length = 232 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N ++ S+G I V +R + LE+ A +IIL HNHPSG PS AD Sbjct: 136 IYLNNSNKILRKMQLSKGGITGTLVDVRLAFKNALEIGAVAIILAHNHPSGTLKPSVADK 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ I T L++ V DH+II + A+ SF +I Sbjct: 196 NLTEKIKTAGLSLDVKVLDHVIITEQAYFSFADEGLI 232 >gi|73662414|ref|YP_301195.1| putative DNA repair protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123642774|sp|Q49Y92|Y1105_STAS1 RecName: Full=UPF0758 protein SSP1105 gi|72494929|dbj|BAE18250.1| putative DNA repair protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 226 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ NI+I + GT++ V+ REI ++ ++ +II++HNHPSG+ PS DI Sbjct: 128 LFLNSKNIIIKQKTIFMGTLNSAIVHPREIYSEAVKCASNAIIVLHNHPSGDTTPSLEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + + L I + DH+IIG ++S Sbjct: 188 KTTDRLRECGDILGIQLLDHVIIGDHTYLSMVEEGY 223 >gi|290580506|ref|YP_003484898.1| putative DNA repair protein [Streptococcus mutans NN2025] gi|254997405|dbj|BAH88006.1| putative DNA repair protein [Streptococcus mutans NN2025] Length = 226 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 55/94 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I +V G++ REI+ + ATS+I+VHNHPSG+ PS+ D+ Sbjct: 129 IYLDTQNRVIKKQVIFIGSVRRSVAEPREILHYACKSMATSLIIVHNHPSGSTYPSENDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + + L I+ DHII+GK + SF+ Sbjct: 189 RFTEKIKRSCDDLGIVFLDHIIVGKKEYYSFREE 222 >gi|116511836|ref|YP_809052.1| DNA repair protein [Lactococcus lactis subsp. cremoris SK11] gi|116107490|gb|ABJ72630.1| DNA repair protein [Lactococcus lactis subsp. cremoris SK11] Length = 217 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 48/93 (51%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD N +I + G ++H REI+ ++ + +++ HNHPSGN PS AD Sbjct: 120 YLDGQNQIIEKKTIFIGAVNHATASPREILYHAIKNLSVGLLVAHNHPSGNLQPSQADKI 179 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ + + + I DHII+G + SF+ Sbjct: 180 FTKKLKNACDNIGINFIDHIIVGAGNYYSFRER 212 >gi|238762714|ref|ZP_04623683.1| DNA repair protein RadC [Yersinia kristensenii ATCC 33638] gi|238699019|gb|EEP91767.1| DNA repair protein RadC [Yersinia kristensenii ATCC 33638] Length = 156 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + L+ E GT+ H+ V+ RE+V+ L+ +A ++IL HNHPSG S D Sbjct: 61 MYLDNQHCLLERETLFTGTLSHIEVHPREVVKSALKHNAAAVILAHNHPSGTTEISQQDK 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ I+ L + + V DH+++G + VSF + Sbjct: 121 HITQRIMKALALVEVRVLDHLVVG-NEVVSFAECGWL 156 >gi|57233728|ref|YP_182165.1| RadC family DNA repair protein [Dehalococcoides ethenogenes 195] gi|57224176|gb|AAW39233.1| DNA repair protein, RadC family [Dehalococcoides ethenogenes 195] Length = 271 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + ++ GT+ V RE++ + +A+++I VHNHPSG PS AD Sbjct: 142 IYLDSQHRVLEVADLFSGTVASGCVIPREVIGAAISQNASALIFVHNHPSGKTEPSQADK 201 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ ++ + I DHIIIG + + SF ++ Sbjct: 202 DLTRELVYAAMVMKIRALDHIIIGDNCYFSFAAAGLM 238 >gi|258592223|emb|CBE68532.1| DNA repair protein radC homolog [NC10 bacterium 'Dutch sediment'] Length = 245 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ +N ++ + S G++ PVY+R +V A ++I+ HNHPSGNP PS AD Sbjct: 136 LLLNGNNEVLENVTASEGSLTESPVYLRNLVNLANRHQAVALIVAHNHPSGNPRPSQADK 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ ++ L I V DH+IIG + SF +I Sbjct: 196 SLTEELVVMGRLLKIGVLDHVIIGDGCYYSFADEGLI 232 >gi|270158831|ref|ZP_06187488.1| DNA repair protein RadC [Legionella longbeachae D-4968] gi|289166376|ref|YP_003456514.1| DNA repair protein RadC (start is missing) [Legionella longbeachae NSW150] gi|269990856|gb|EEZ97110.1| DNA repair protein RadC [Legionella longbeachae D-4968] gi|288859549|emb|CBJ13514.1| DNA repair protein RadC (start is missing) [Legionella longbeachae NSW150] Length = 191 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 56/90 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA + GTI+ ++ R I++R L L+A ++IL HNHPSG +PS DI Sbjct: 85 LFLDNQHRIIAYDELFSGTINTATIHPRPIIERVLRLNAAALILAHNHPSGVSDPSPQDI 144 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90 +T+ + L +++ + DHIIIG + S Sbjct: 145 AVTERMREALELVDVRLLDHIIIGDNEVYS 174 >gi|163786204|ref|ZP_02180652.1| putative DNA repair protein [Flavobacteriales bacterium ALC-1] gi|159878064|gb|EDP72120.1| putative DNA repair protein [Flavobacteriales bacterium ALC-1] Length = 232 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I S+G I V +R +++ LE+ AT+++L HNHPSG PS AD Sbjct: 136 LYLNNSNKIIQKNQLSKGGITGTLVDVRLVLKNALEVGATALVLCHNHPSGTLKPSQADK 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ + L+I V DH+I+ + A+ SF II Sbjct: 196 DITQKLKIAAKSLDIKVLDHLIVTEKAYFSFADEEII 232 >gi|57234651|ref|YP_181315.1| RadC family DNA repair protein [Dehalococcoides ethenogenes 195] gi|57225099|gb|AAW40156.1| DNA repair protein, RadC family [Dehalococcoides ethenogenes 195] Length = 222 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI S G++D V+ RE+ + L SA ++IL HNHPSG PS DI Sbjct: 126 LMLDVKSKLIRVGHISAGSLDESVVHPREVFKEALSASAATVILAHNHPSGESEPSPDDI 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++ + + I V DH+IIG F S K ++ Sbjct: 186 GLSARLREAGGIMGIEVLDHVIIGGQTFTSLKRQGLL 222 >gi|331683685|ref|ZP_08384281.1| DNA repair protein, RADC family [Escherichia coli H299] gi|331078637|gb|EGI49839.1| DNA repair protein, RADC family [Escherichia coli H299] Length = 90 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 54/90 (60%) Query: 8 ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNII 67 LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD +T+ ++ Sbjct: 1 QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 60 Query: 68 TTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 L ++I V DH+I+G + SF ++ Sbjct: 61 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 90 >gi|160938816|ref|ZP_02086167.1| hypothetical protein CLOBOL_03710 [Clostridium bolteae ATCC BAA-613] gi|158437779|gb|EDP15539.1| hypothetical protein CLOBOL_03710 [Clostridium bolteae ATCC BAA-613] Length = 231 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ ++ D++ +RGT++ + RE++ L A S++LVHNHPSG+P PS ADI Sbjct: 135 MFLNTKQAMVRDQIMARGTVNASVMTPREVLIEGLRCRAVSMVLVHNHPSGDPTPSRADI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + I + DHI+IG ++SF+ ++ Sbjct: 195 LLTKRLKEAGDLVGITLIDHIVIGDRRYLSFREENLM 231 >gi|24379492|ref|NP_721447.1| DNA repair protein RadC [Streptococcus mutans UA159] gi|24377431|gb|AAN58753.1|AE014944_3 putative DNA repair protein RadC [Streptococcus mutans UA159] Length = 209 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 55/94 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I +V G++ REI+ + ATS+I+VHNHPSG+ PS+ D+ Sbjct: 112 IYLDTQNRVIKKQVIFIGSVRRSVAEPREILHYACKSMATSLIIVHNHPSGSTYPSENDL 171 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + + L I+ DHII+GK + SF+ Sbjct: 172 RFTEKIKRSCDDLGIVFLDHIIVGKKEYYSFREE 205 >gi|291459235|ref|ZP_06598625.1| DNA repair protein RadC [Oribacterium sp. oral taxon 078 str. F0262] gi|291418489|gb|EFE92208.1| DNA repair protein RadC [Oribacterium sp. oral taxon 078 str. F0262] Length = 232 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 39/95 (41%), Positives = 51/95 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD LI D SRGT + R+I + L SII+VHNHPSG P PS+ D Sbjct: 136 LYLDNQLQLIRDVQLSRGTCSSSAISPRDIFREALRNGGVSIIMVHNHPSGVPEPSEEDR 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 + T + L I + DHII+G +A+ SFK Sbjct: 196 SFTAELFRLGQCLGIPLIDHIIMGDNAYYSFKEQG 230 >gi|289424005|ref|ZP_06425794.1| DNA repair protein RadC [Peptostreptococcus anaerobius 653-L] gi|289155580|gb|EFD04256.1| DNA repair protein RadC [Peptostreptococcus anaerobius 653-L] Length = 227 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 40/94 (42%), Positives = 60/94 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I+D S G++++ V+ RE+ ++ SA SIIL+HNHPSGNPNPS DI Sbjct: 131 VLLNTKNEIISDINISIGSLNYSIVHPREVFTEAIKKSANSIILMHNHPSGNPNPSLEDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 N+T+ + + L I V DH+IIG+ + S K Sbjct: 191 NVTKRLRESGEILGIEVLDHVIIGEGVYYSLKEE 224 >gi|121634962|ref|YP_975207.1| DNA repair protein RadC [Neisseria meningitidis FAM18] gi|166218786|sp|A1KU78|Y1174_NEIMF RecName: Full=UPF0758 protein NMC1174 gi|120866668|emb|CAM10420.1| putative DNA repair protein [Neisseria meningitidis FAM18] gi|325132546|gb|EGC55239.1| DNA repair protein RadC [Neisseria meningitidis M6190] gi|325198403|gb|ADY93859.1| DNA repair protein RadC [Neisseria meningitidis G2136] Length = 225 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ +YIREIV+ L+ A S+I+ HNHP G+P PS DI Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + ++ +++ + DH I+ + SF+ L ++ Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQSVRSFRQLGLM 224 >gi|327541466|gb|EGF28004.1| DNA repair protein RadC [Rhodopirellula baltica WH47] Length = 314 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 50/91 (54%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + I + GT+D V+ RE+ + + +A +++LVHNHPSG+P PS D + Sbjct: 223 LDTKHKPIRTHRITVGTLDSSLVHPREVFRPAIRDAAAAVLLVHNHPSGDPTPSREDHAV 282 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 T+ + + I V DHI++ K +S + Sbjct: 283 TERLTEAGKLIGITVLDHIVVAKQRCLSLRE 313 >gi|313889365|ref|ZP_07823013.1| DNA repair protein RadC [Streptococcus pseudoporcinus SPIN 20026] gi|313122197|gb|EFR45288.1| DNA repair protein RadC [Streptococcus pseudoporcinus SPIN 20026] Length = 228 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 54/94 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N +I ++ G++ REI+ ATS+I+VHNHPSG NPS+ D Sbjct: 129 LYLDTQNKVIEEKTIFIGSVRRSIAEPREILHYACRNMATSMIIVHNHPSGLVNPSENDY 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 + T+NI + + I DHII+GK+ + SF+ Sbjct: 189 HFTKNIKQLCDQIGIACLDHIIVGKNNYYSFREK 222 >gi|188992052|ref|YP_001904062.1| DNA repair protein radC homolog [Xanthomonas campestris pv. campestris str. B100] gi|325915422|ref|ZP_08177736.1| DNA repair protein radc [Xanthomonas vesicatoria ATCC 35937] gi|167733812|emb|CAP52018.1| DNA repair protein radC homolog [Xanthomonas campestris pv. campestris] gi|325538304|gb|EGD09986.1| DNA repair protein radc [Xanthomonas vesicatoria ATCC 35937] Length = 159 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD +++I+ E GTID V+ R + + LEL+A ++IL HNHPSGNP PS AD Sbjct: 63 VFLDNQHLIISTEHLFSGTIDGCEVHPRVVAKLALELNAVAVILFHNHPSGNPEPSQADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + L L+I V DH++IG VS Sbjct: 123 QVTKRLQEALGLLDIRVIDHLVIGGRQHVSLAARGW 158 >gi|331001793|ref|ZP_08325315.1| hypothetical protein HMPREF0491_00177 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412767|gb|EGG92150.1| hypothetical protein HMPREF0491_00177 [Lachnospiraceae oral taxon 107 str. F0167] Length = 229 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 43/97 (44%), Positives = 65/97 (67%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD I+D V S GT++ V +REI+ L+ A ++IL+HNHPSG+P+PS ADI Sbjct: 133 IFLDTKQKPISDMVISVGTVNASLVSVREILIESLKHLAVNVILLHNHPSGDPSPSKADI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T++I L+ + I + DHI+IG + + SFK II Sbjct: 193 DITKDINKALDSIGIELVDHIVIGDNCYYSFKEQGII 229 >gi|329117353|ref|ZP_08246070.1| DNA repair protein RadC [Streptococcus parauberis NCFD 2020] gi|326907758|gb|EGE54672.1| DNA repair protein RadC [Streptococcus parauberis NCFD 2020] Length = 226 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 54/94 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I ++ G++ REI+ + ATS+I+VHNHPSG NPS+ D Sbjct: 129 IYLDTQNRIIEEKTIFIGSVKRSIAEPREILHYACKNMATSLIVVHNHPSGLTNPSENDF 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 + T+ I + + + I DHII+GK + SF+ Sbjct: 189 HFTEKIKQSCDQIGITCLDHIIVGKKTYYSFREN 222 >gi|145639535|ref|ZP_01795139.1| putative DNA repair radC-like protein [Haemophilus influenzae PittII] gi|145271326|gb|EDK11239.1| putative DNA repair radC-like protein [Haemophilus influenzae PittII] Length = 156 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ + LI EV +G++ + V IREI+++ L+L+A++II+ HNHP+GN PSDAD Sbjct: 60 LFLDRTHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I + DH I+ A F +I Sbjct: 120 YVTKRLKEACELMEIKLLDHFIVSGSASFCFTDNHLI 156 >gi|148557370|ref|YP_001264952.1| DNA repair protein RadC [Sphingomonas wittichii RW1] gi|148502560|gb|ABQ70814.1| DNA repair protein RadC [Sphingomonas wittichii RW1] Length = 230 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 66/97 (68%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N+L+ DE+ S G++D VY+REI++R LEL + ++I+VHNHPSG+P PS D+ Sbjct: 134 LHLNSKNVLVRDELVSEGSVDQAAVYVREIIRRALELGSAALIIVHNHPSGDPQPSRQDV 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I PL I +HDH+++G S + L +I Sbjct: 194 ELTRELIAAAKPLGIAIHDHVVVGTRGQASLRALGLI 230 >gi|262039133|ref|ZP_06012461.1| DNA repair protein RadC [Leptotrichia goodfellowii F0264] gi|261746842|gb|EEY34353.1| DNA repair protein RadC [Leptotrichia goodfellowii F0264] Length = 224 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N LI +E +GT+D +Y+RE++++ L+ +A S+ILVHNHPSG+ PS +DI Sbjct: 128 LFLNTQNELIREEELFQGTLDRSTIYVRELMKKVLKYNAKSVILVHNHPSGSLKPSQSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I + DHIII + + SF I+ Sbjct: 188 ILTKKIKEIFENVEIRLLDHIIISEKGYFSFLEGGIL 224 >gi|288575704|ref|ZP_05977454.2| DNA repair protein RadC [Neisseria mucosa ATCC 25996] gi|288567139|gb|EFC88699.1| DNA repair protein RadC [Neisseria mucosa ATCC 25996] Length = 232 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ VYIREIV+ L+ A S+I+ HNHP G+ PS +DI Sbjct: 134 LLLNRQNRLIAMRELSRGTVAENTVYIREIVKLALDEYADSLIIAHNHPGGSATPSQSDI 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + L +++ + DH I+ S + + Sbjct: 194 AFTGRLKQALALVDVSLLDHFIVTATEVCSMREQGYM 230 >gi|58040815|ref|YP_192779.1| DNA repair protein RadC [Gluconobacter oxydans 621H] gi|58003229|gb|AAW62123.1| DNA repair protein RadC [Gluconobacter oxydans 621H] Length = 216 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 46/97 (47%), Positives = 68/97 (70%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ N LIADE Q+RGT++H PVY RE+ +R +E+ AT+++LVHNHPSG+P PS+AD+ Sbjct: 120 LFLNEKNSLIADEAQARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEADL 179 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + L + + + DH IIG SF+ ++ Sbjct: 180 QMTMQVQAALEVVGVTIADHFIIGNGRHTSFRRSNLL 216 >gi|325918271|ref|ZP_08180413.1| DNA repair protein radc [Xanthomonas vesicatoria ATCC 35937] gi|325535515|gb|EGD07369.1| DNA repair protein radc [Xanthomonas vesicatoria ATCC 35937] Length = 159 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 56/96 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E GTID V+ R + +R L+L+A ++IL HNHPSGNP PS+AD Sbjct: 63 VFLDIKHQILATEHLFFGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADR 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + L +I + DH++IG S Sbjct: 123 KVTERLQQALGLFDIRILDHLVIGGRQHTSLAARGW 158 >gi|91784962|ref|YP_560168.1| DNA repair protein RadC [Burkholderia xenovorans LB400] gi|123168147|sp|Q13UX3|Y3578_BURXL RecName: Full=UPF0758 protein Bxeno_A3578 gi|91688916|gb|ABE32116.1| DNA replication and repair protein RadC [Burkholderia xenovorans LB400] Length = 253 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 58/96 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E ++GT+ + VY REIV+R L L+A S+I+ HNHPSG PS +D Sbjct: 157 LFLDARHRLIRCEESAQGTLTRMAVYPREIVRRALSLNAASLIVAHNHPSGAVQPSASDC 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T + L +++ + DH++IG D+ SF Sbjct: 217 RLTHTLRDALTLIDVQLVDHLVIGTDSVYSFARAGW 252 >gi|282904233|ref|ZP_06312121.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus C160] gi|282906058|ref|ZP_06313913.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus Btn1260] gi|282908973|ref|ZP_06316791.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus WW2703/97] gi|283958413|ref|ZP_06375864.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus A017934/97] gi|297590804|ref|ZP_06949442.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus MN8] gi|282327237|gb|EFB57532.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331350|gb|EFB60864.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus Btn1260] gi|282595851|gb|EFC00815.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus C160] gi|283790562|gb|EFC29379.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus A017934/97] gi|297575690|gb|EFH94406.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus MN8] Length = 228 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 49/96 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ RE + +A +II VHNHPSG+ PS DI Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREFFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG + F S Sbjct: 188 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223 >gi|119384282|ref|YP_915338.1| DNA repair protein RadC [Paracoccus denitrificans PD1222] gi|119374049|gb|ABL69642.1| DNA repair protein RadC [Paracoccus denitrificans PD1222] Length = 162 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 47/95 (49%), Positives = 66/95 (69%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N LI+DE + GT+DHVPVY RE+++RCL L+A+++I+VHNHP+G+P PS AD Sbjct: 66 LYLDRRNRLISDECLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHPAGDPEPSAADF 125 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 MT+ I L +I+HDHII G S + Sbjct: 126 AMTKEIRNASASLGVILHDHIITGAGRETSLRARG 160 >gi|307730752|ref|YP_003907976.1| DNA repair protein RadC [Burkholderia sp. CCGE1003] gi|307585287|gb|ADN58685.1| DNA repair protein RadC [Burkholderia sp. CCGE1003] Length = 214 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 60/96 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E +RGT+ + VY REIV+R L L+A S+I+ HNHPSG PS +D Sbjct: 118 LFLDARHRLIRSEESARGTLTRMAVYPREIVRRALALNAASLIVAHNHPSGAVQPSASDC 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+++ L +++ + DH++IG + SF Sbjct: 178 SLTRSLREALALIDVQLVDHLVIGAEGVYSFARAGW 213 >gi|307294409|ref|ZP_07574253.1| DNA repair protein RadC [Sphingobium chlorophenolicum L-1] gi|306880560|gb|EFN11777.1| DNA repair protein RadC [Sphingobium chlorophenolicum L-1] Length = 245 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N+LI DE G+ID +Y RE+++R ++L + ++ILVHNHPSG+P PS DI Sbjct: 149 LHLNSRNMLIRDEHMGDGSIDQAAIYTREVIRRAIDLGSAALILVHNHPSGSPEPSRQDI 208 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I LNI VHDHIIIG S + +I Sbjct: 209 EITRQIAEAGKRLNIAVHDHIIIGAQGHTSLRAKGLI 245 >gi|158520692|ref|YP_001528562.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3] gi|158509518|gb|ABW66485.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3] Length = 253 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F+D N +I E S G++ PVY RE+V R L A ++I HNHPSG P PS DI Sbjct: 132 IFMDAKNRVIVVETLSEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPEPSRQDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I VH+HII+G+ SF + Sbjct: 192 AITRKLVMACKTMGITVHEHIIVGERGHFSFADNGYM 228 >gi|229824746|ref|ZP_04450815.1| hypothetical protein GCWU000182_00094 [Abiotrophia defectiva ATCC 49176] gi|229791075|gb|EEP27189.1| hypothetical protein GCWU000182_00094 [Abiotrophia defectiva ATCC 49176] Length = 240 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 56/96 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD LI + S GTI+ + RE+ + L+ A +++L+HNHPSG+P PS ADI Sbjct: 132 LLLDIKCRLIKELTISIGTINQSFLRPREVFIQALKYEAVNLVLIHNHPSGDPTPSKADI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T I+ + I + DHIIIG +VSF+ + Sbjct: 192 IVTDKILEVSELVGIPLVDHIIIGDCCYVSFREKGL 227 >gi|332042741|gb|EGI78941.1| DNA repair protein RadC [Lacinutrix algicola 5H-3-7-4] Length = 232 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I S+G I V +R ++ LE+ A IIL HNHPSG NPS AD Sbjct: 136 IYLNNSNKVIQKNQLSKGGITGTLVDVRLALKIALEVGAVGIILAHNHPSGTLNPSLADK 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+TQ + T L+I V DH+II + A+ SF I+ Sbjct: 196 NLTQKLKTAAQSLDIKVLDHLIITEKAYFSFADESIL 232 >gi|217969675|ref|YP_002354909.1| DNA repair protein RadC [Thauera sp. MZ1T] gi|217507002|gb|ACK54013.1| DNA repair protein RadC [Thauera sp. MZ1T] Length = 225 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI RGT+ VY RE+V+ L +A ++IL HNHPSG PS AD Sbjct: 128 LLLDARHCLIEAVDLFRGTLTQTSVYPREVVKLALARNAAAVILAHNHPSGAAEPSTADE 187 Query: 61 NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97 +T+ + L +++ V DH ++ VSF ++ Sbjct: 188 LLTRALKDALGLVDVRVLDHFVVPAHGHPVSFAERGLL 225 >gi|78186481|ref|YP_374524.1| DNA repair protein RadC [Chlorobium luteolum DSM 273] gi|123583334|sp|Q3B5A0|Y598_PELLD RecName: Full=UPF0758 protein Plut_0598 gi|78166383|gb|ABB23481.1| DNA replication and repair protein RadC [Chlorobium luteolum DSM 273] Length = 223 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N + + GT++ ++ RE+ + + SA +IILVHNHPSG+ PS+AD Sbjct: 126 LHLNTKNQVTKCVRVTVGTLNASLIHPREVFKSAIRESAHAIILVHNHPSGDTEPSNADR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + I + DH+IIGK ++ SF+ ++ Sbjct: 186 QVTTLLKQASAVIQIDLLDHVIIGKTSWFSFRESNLL 222 >gi|296273006|ref|YP_003655637.1| DNA repair protein RadC [Arcobacter nitrofigilis DSM 7299] gi|296097180|gb|ADG93130.1| DNA repair protein RadC [Arcobacter nitrofigilis DSM 7299] Length = 220 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LI ++ + GT++ V+ RE+ +E SII+ HNHPSG PS DI Sbjct: 124 LYLDGANNLIETKIITIGTLNQSLVHPREVFSHAIEKRCASIIVAHNHPSGILKPSSEDI 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+TQ + + L I + DH+I + F+S + ++ Sbjct: 184 NVTQRLKESGKILGIELLDHVIFTNEGFISLQEEGVL 220 >gi|289666330|ref|ZP_06487911.1| DNA repair protein RadC [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 213 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 37/86 (43%), Positives = 56/86 (65%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + IA E GTID ++ RE+V+R L +A ++I+ HNHPSGNP PS+AD Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKD 86 +T+ ++ +L ++I + DH +IG Sbjct: 188 AVTKRLLESLELVDIRLLDHFVIGDG 213 >gi|258424078|ref|ZP_05686960.1| DNA repair protein RadC [Staphylococcus aureus A9635] gi|257845699|gb|EEV69731.1| DNA repair protein RadC [Staphylococcus aureus A9635] Length = 228 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ PS DI Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG + F S Sbjct: 188 ITTIRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223 >gi|42741710|gb|AAS45108.1| DNA repair protein [Alcaligenes faecalis] Length = 176 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 57/96 (59%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD LI S+GTI VY RE+V+ L L+A+++I+ HNHPSG+P PS ADI Sbjct: 81 YLDHQFRLIRYMEISQGTISQASVYPREVVKTGLRLNASAVIMAHNHPSGSPTPSQADIT 140 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L +++ + DHII+ S + +I Sbjct: 141 LTTHLRKALALIDLRLLDHIIVTGKGTSSMASMGLI 176 >gi|255535538|ref|YP_003095909.1| DNA repair protein RadC [Flavobacteriaceae bacterium 3519-10] gi|255341734|gb|ACU07847.1| DNA repair protein RadC [Flavobacteriaceae bacterium 3519-10] Length = 225 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+++N +I S G I+ V +R + + L+ +T+I++ HNHPSGN PS D+ Sbjct: 129 IYLNQNNRVIGKSRLSSGGINQSVVDVRILFKSALDHLSTAIVIAHNHPSGNLKPSAEDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I LNI + DH+II ++++ SF ++ Sbjct: 189 KITRQITDAGKILNIQLLDHLIISQNSYFSFADENVL 225 >gi|315924133|ref|ZP_07920359.1| DNA repair protein RadC [Pseudoramibacter alactolyticus ATCC 23263] gi|315622535|gb|EFV02490.1| DNA repair protein RadC [Pseudoramibacter alactolyticus ATCC 23263] Length = 256 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + E S GT++ V+ RE+ + SA++IIL HNHPSG+ PS+ D+ Sbjct: 156 LLLDTKHKIFKAEEVSVGTLNSSLVHPREVFYPAIRQSASAIILAHNHPSGDVTPSEEDL 215 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKD---AFVSFKGLRII 97 +T ++ + I + DH I+G + SFK + Sbjct: 216 ALTNRLVQVGEIMGIPILDHFIVGGTVSADYFSFKQTGYM 255 >gi|284800095|ref|ZP_05985708.2| DNA repair protein RadC [Neisseria subflava NJ9703] gi|284795938|gb|EFC51285.1| DNA repair protein RadC [Neisseria subflava NJ9703] Length = 230 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ VYIREIV+ L+ A S+IL HNHP G+ PS++D+ Sbjct: 134 LLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGGSGRPSESDV 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L+ ++I + DH I+ S + + Sbjct: 194 QFTERLKQALSLVDITLLDHFIVTAKETCSLREQGYM 230 >gi|325978185|ref|YP_004287901.1| DNA repair protein radC [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178113|emb|CBZ48157.1| DNA repair protein radC [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 226 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I G++ REI+ + ATS+I+VHNHPSG+P PS+ D+ Sbjct: 129 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 TQ + + II DHI+IGK + SF+ Sbjct: 189 QFTQKMKRACEDIGIICLDHIVIGKYQYYSFREE 222 >gi|319637952|ref|ZP_07992718.1| DNA repair protein radC [Neisseria mucosa C102] gi|317401107|gb|EFV81762.1| DNA repair protein radC [Neisseria mucosa C102] Length = 224 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ VYIREIV+ L+ A S+IL HNHP G+ PS++D+ Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGGSARPSESDV 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L+ ++I + DH I+ S + + Sbjct: 188 QFTERLKQALSLVDITLLDHFIVTAKETCSLREQGYM 224 >gi|288905210|ref|YP_003430432.1| Putaitve DNA repair protein (RadC) [Streptococcus gallolyticus UCN34] gi|288731936|emb|CBI13501.1| Putaitve DNA repair protein (RadC) [Streptococcus gallolyticus UCN34] Length = 226 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I G++ REI+ + ATS+I+VHNHPSG+P PS+ D+ Sbjct: 129 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 TQ + + II DHI+IGK + SF+ Sbjct: 189 QFTQKMKRACEDIGIICLDHIVIGKYQYYSFREE 222 >gi|319952212|ref|YP_004163479.1| DNA repair protein radc [Cellulophaga algicola DSM 14237] gi|319420872|gb|ADV47981.1| DNA repair protein RadC [Cellulophaga algicola DSM 14237] Length = 232 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N ++ QS+G+I V +R I++ LELSA +IIL HNHPSG PS AD Sbjct: 136 VYLNNSNKVLHHSQQSKGSITGTLVDVRLIMKEALELSAVAIILAHNHPSGTLKPSLADK 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I L+I V DH+II + + SF I+ Sbjct: 196 QITQKIKNAAEGLDIKVLDHLIITQAEYFSFADENIL 232 >gi|294663924|ref|ZP_06729354.1| DNA repair protein radC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606302|gb|EFF49523.1| DNA repair protein radC [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 105 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + ++A E GTID V+ R + +R L+L+A ++IL HNHPSGNP PS+AD Sbjct: 9 VFLDNKHHILATEHLFSGTIDGCDVHPRVVAKRALDLNAVAVILFHNHPSGNPEPSEADR 68 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ++ L L+I V DH++IG S + Sbjct: 69 KVTQHLQEALGLLDIRVLDHLVIGGRQHTSLAARGWV 105 >gi|169824054|ref|YP_001691665.1| DNA repair protein RadC [Finegoldia magna ATCC 29328] gi|254789652|sp|B0S3Y4|Y357_FINM2 RecName: Full=UPF0758 protein FMG_0357 gi|167830859|dbj|BAG07775.1| DNA repair protein RadC [Finegoldia magna ATCC 29328] Length = 223 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 38/92 (41%), Positives = 59/92 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N +I+ E+ S+GTI+ V+ RE+ + ++ A SIILVHNHPSG+ PS+ADI Sbjct: 127 LLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNADI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 +T+ + + + I V DHII+ + +S + Sbjct: 187 EVTKRLDKVGDLVGIQVLDHIIVSSNDSLSMR 218 >gi|161870118|ref|YP_001599288.1| DNA repair protein RadC [Neisseria meningitidis 053442] gi|218768270|ref|YP_002342782.1| DNA repair protein RadC [Neisseria meningitidis Z2491] gi|13431809|sp|Q9JU84|Y1448_NEIMA RecName: Full=UPF0758 protein NMA1448 gi|189029398|sp|A9LZF5|Y1157_NEIM0 RecName: Full=UPF0758 protein NMCC_1157 gi|121052278|emb|CAM08606.1| putative DNA repair protein [Neisseria meningitidis Z2491] gi|161595671|gb|ABX73331.1| DNA repair protein [Neisseria meningitidis 053442] gi|254671390|emb|CBA08859.1| DNA repair protein RadC [Neisseria meningitidis alpha153] gi|254673513|emb|CBA08942.1| DNA repair protein RadC [Neisseria meningitidis alpha275] gi|261392467|emb|CAX50016.1| putative DNA repair protein RadC [Neisseria meningitidis 8013] gi|316984664|gb|EFV63628.1| DNA repair RadC family protein [Neisseria meningitidis H44/76] gi|325134196|gb|EGC56845.1| DNA repair protein RadC [Neisseria meningitidis M13399] gi|325140244|gb|EGC62769.1| DNA repair protein RadC [Neisseria meningitidis CU385] gi|325144387|gb|EGC66689.1| DNA repair protein RadC [Neisseria meningitidis M01-240013] gi|325200279|gb|ADY95734.1| DNA repair protein RadC [Neisseria meningitidis H44/76] gi|325206135|gb|ADZ01588.1| DNA repair protein RadC [Neisseria meningitidis M04-240196] Length = 225 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ +YIREIV+ L+ A S+I+ HNHP G+P PS DI Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + ++ +++ + DH I+ SF+ L ++ Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTAQTVRSFRQLGLM 224 >gi|163783631|ref|ZP_02178620.1| DNA repair protein RadC [Hydrogenivirga sp. 128-5-R1-1] gi|159881124|gb|EDP74639.1| DNA repair protein RadC [Hydrogenivirga sp. 128-5-R1-1] Length = 225 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + ++ EV + GT++ V +++++ +ELSA +++ HNHP G P PS+ D+ Sbjct: 128 LYLDLSHRVMHLEVVAVGTLNAVNANPKDVLRPAVELSAYGVLIAHNHPQGLPEPSEGDV 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L + DHI++ + +VSF+ ++ Sbjct: 188 MFTERLKRACEILGFELVDHIVVSPEGYVSFRDRGLL 224 >gi|322385574|ref|ZP_08059218.1| DNA repair protein RadC [Streptococcus cristatus ATCC 51100] gi|321270312|gb|EFX53228.1| DNA repair protein RadC [Streptococcus cristatus ATCC 51100] Length = 227 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I + GT+ REI+ L+ ATSIILVHNHPSG PS D Sbjct: 130 IYLNSQNQIIHQQTIFVGTVTRSIAEPREILHYALKHLATSIILVHNHPSGVTLPSKNDD 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+++ + +++ DH+I+ K+ + S++ Sbjct: 190 EVTKHMKEACELMGLVLLDHLIVSKNNYYSYREK 223 >gi|302381094|ref|ZP_07269554.1| putative DNA repair protein RadC [Finegoldia magna ACS-171-V-Col3] gi|303235301|ref|ZP_07321919.1| putative DNA repair protein RadC [Finegoldia magna BVS033A4] gi|302311141|gb|EFK93162.1| putative DNA repair protein RadC [Finegoldia magna ACS-171-V-Col3] gi|302493615|gb|EFL53403.1| putative DNA repair protein RadC [Finegoldia magna BVS033A4] Length = 223 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 38/92 (41%), Positives = 59/92 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N +I+ E+ S+GTI+ V+ RE+ + ++ A SIILVHNHPSG+ PS+ADI Sbjct: 127 LLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNADI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 +T+ + + + I V DHII+ + +S + Sbjct: 187 EVTKRLDKVGDLVGIQVLDHIIVSSNDSLSMR 218 >gi|89053211|ref|YP_508662.1| DNA repair protein RadC [Jannaschia sp. CCS1] gi|88862760|gb|ABD53637.1| DNA repair protein RadC [Jannaschia sp. CCS1] Length = 273 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 52/97 (53%), Positives = 74/97 (76%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ N+LIADE GT+DHVPVY RE+ +R LEL+AT+IILVHNHPSG+P PS ADI Sbjct: 177 LYLNRRNVLIADEAVGTGTVDHVPVYPREVAKRSLELNATAIILVHNHPSGDPTPSQADI 236 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ + + + ++VHDH+IIGK + SF+ ++ Sbjct: 237 DVTQAVQLACDAIGVVVHDHVIIGKQSETSFRADLLM 273 >gi|296157154|ref|ZP_06839990.1| DNA repair protein RadC [Burkholderia sp. Ch1-1] gi|295892490|gb|EFG72272.1| DNA repair protein RadC [Burkholderia sp. Ch1-1] Length = 253 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 58/96 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E ++GT+ + VY REIV+R L L+A S+I+ HNHPSG PS +D Sbjct: 157 LFLDARHRLIRCEESAQGTLTRMAVYPREIVRRALSLNAASLIVAHNHPSGAVQPSASDC 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T + L +++ + DH++IG D+ SF Sbjct: 217 RLTHTLRDALTLIDVQLVDHLVIGTDSVYSFARAGW 252 >gi|330429000|gb|AEC20334.1| DNA repair protein radC-like protein [Pusillimonas sp. T7-7] Length = 177 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ +I S GT+ VY REIV+ L L A +II+ HNHPSG P PS+AD+ Sbjct: 81 LYLNSQFKVIRYMEMSHGTLTQASVYPREIVKTALRLDAAAIIMSHNHPSGIPEPSEADL 140 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+++ L +++ + DHII+ S Sbjct: 141 ALTRHLKHALALVDVRLLDHIIVTGQNTTSLAERG 175 >gi|225075521|ref|ZP_03718720.1| hypothetical protein NEIFLAOT_00534 [Neisseria flavescens NRL30031/H210] gi|224953156|gb|EEG34365.1| hypothetical protein NEIFLAOT_00534 [Neisseria flavescens NRL30031/H210] Length = 230 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ VYIREIV+ L+ A S+IL HNHP G+ PS++D+ Sbjct: 134 LLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGGSARPSESDV 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L+ ++I + DH I+ S + + Sbjct: 194 QFTERLKQALSLVDITLLDHFIVTAKETCSLREQGYM 230 >gi|227824844|ref|ZP_03989676.1| DNA repair protein radC [Acidaminococcus sp. D21] gi|226905343|gb|EEH91261.1| DNA repair protein radC [Acidaminococcus sp. D21] Length = 229 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L ++ E G+ V+ REI + L A+++ILVHNHPSG+P PS DI Sbjct: 133 LLLSAKGKVLGIEEVFVGSASQATVHPREIFETALHHHASALILVHNHPSGDPMPSRPDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + ++I + DHIIIG + SFK + Sbjct: 193 RLTERLAQVGGLMDIPLADHIIIGDGIYYSFKDADQL 229 >gi|325918019|ref|ZP_08180183.1| DNA repair protein [Xanthomonas vesicatoria ATCC 35937] gi|325535783|gb|EGD07615.1| DNA repair protein [Xanthomonas vesicatoria ATCC 35937] Length = 169 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 52/96 (54%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FLD + LI E G+++ V+ R +VQR L L+A ++I+ HNHPSG+ PS AD Sbjct: 74 FLDNQHRLIGVERLFSGSVEGAEVHPRIVVQRALALNAAAVIVAHNHPSGHTEPSAADRA 133 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + T L + I + DH ++ VS + Sbjct: 134 VTVQLKTVLQLVEIRLLDHFVVTAHQAVSMATRGWV 169 >gi|297184191|gb|ADI20310.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 122 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ + +A +G + +R I++R L +AT+II+ HNHPSG+ PS+ D Sbjct: 26 LYLNRAHAPLARHQLFKGGLTGTVTDVRLILKRALHWNATAIIVAHNHPSGSLQPSENDK 85 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ + + L+I + DH+I+ + SF ++ Sbjct: 86 RMTRKLSAAADTLDIKLIDHLIVAGSGYFSFSDQGLL 122 >gi|152991449|ref|YP_001357171.1| DNA repair protein RadC [Nitratiruptor sp. SB155-2] gi|151423310|dbj|BAF70814.1| DNA repair protein RadC [Nitratiruptor sp. SB155-2] Length = 220 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 52/96 (54%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD N + V + GT++ V+ RE+ +E SII+ HNHPS N PS DI Sbjct: 125 YLDGANRICEKRVITIGTLNQSLVHPREVFAPAIESRCASIIVAHNHPSNNLTPSREDIL 184 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + L I + DHII K+ FVS + I+ Sbjct: 185 VTQKLKQSGKILGIELLDHIIFSKEGFVSLQEEGIL 220 >gi|56551559|ref|YP_162398.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4] gi|241761310|ref|ZP_04759398.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|56543133|gb|AAV89287.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4] gi|241374217|gb|EER63714.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 227 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 47/97 (48%), Positives = 69/97 (71%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD HN LI DE+ S G++D PVY+RE+++R +EL + +ILVHNHPSG+ +PS+ADI Sbjct: 131 LHLDNHNRLIRDEILSEGSVDQAPVYVREVIRRAIELCSVGLILVHNHPSGDASPSEADI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++I+ PL I +HDH+II S +GL ++ Sbjct: 191 QLTRSIVAAARPLKIYLHDHVIISSSGACSLRGLGLL 227 >gi|325954476|ref|YP_004238136.1| DNA repair protein RadC [Weeksella virosa DSM 16922] gi|323437094|gb|ADX67558.1| DNA repair protein RadC [Weeksella virosa DSM 16922] Length = 233 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L++ N ++ E SRG I V IR + ++ +E AT++IL HNHPSG+ PS++D+ Sbjct: 137 MYLNQGNAVLKLEQISRGGISQTLVDIRIVFKKGIEQMATAMILAHNHPSGSLKPSESDL 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L+I + DH+I+ + ++ SF ++ Sbjct: 197 SLTRKLQEAAKVLDINILDHLIVTQTSYFSFADEGLL 233 >gi|256842605|ref|ZP_05548106.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|262409592|ref|ZP_06086133.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|265768051|ref|ZP_06095433.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|256735742|gb|EEU49075.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|262352606|gb|EEZ01705.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|263252302|gb|EEZ23838.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 208 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI S G I+ PV IR I+++ L +A S I+VHNHPSG PS AD Sbjct: 109 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADD 168 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+I + DH+I+ + + S+ + Sbjct: 169 RLTEAVKKAAETLDIRLVDHVIVAGNNYYSYADEGRL 205 >gi|42520237|ref|NP_966152.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409975|gb|AAS14086.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila melanogaster] Length = 224 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 69/97 (71%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++++K LIA+++Q+ GT+D P+Y+REI++R L + +TSI++ HNHPSG+ PS++DI Sbjct: 128 IYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSGDTQPSNSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DHIII ++ SFK R++ Sbjct: 188 SLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 224 >gi|255016341|ref|ZP_05288467.1| putative DNA repair protein [Bacteroides sp. 2_1_7] Length = 220 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI S G I+ PV IR I+++ L +A S I+VHNHPSG PS AD Sbjct: 121 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSGADD 180 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+I + DH+I+ + + S+ + Sbjct: 181 RLTEAVKKAAETLDIRLLDHVIVAGNNYYSYADEGRL 217 >gi|260752842|ref|YP_003225735.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552205|gb|ACV75151.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 227 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 47/97 (48%), Positives = 69/97 (71%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD HN LI DE+ S G++D PVY+RE+++R +EL + +ILVHNHPSG+ +PS+ADI Sbjct: 131 LHLDNHNRLIRDEILSEGSVDQAPVYVREVIRRAIELCSVGLILVHNHPSGDASPSEADI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++I+ PL I +HDH+II S +GL ++ Sbjct: 191 QLTRSIVAAARPLKIYLHDHVIISSSGACSLRGLGLL 227 >gi|209947531|ref|YP_002291028.1| putative DNA repair-like protein [Haemophilus influenzae] gi|51507273|emb|CAF29022.1| putative DNA repair-like protein [Haemophilus influenzae] Length = 156 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ + LI EV +G++ + V IREI+++ L+L+A++II+ HNHP+GN PSDAD Sbjct: 60 LFLDRMHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I + DH I+ A F ++ Sbjct: 120 YITKRLKEACELMEIKLLDHFIVSGSASFCFTDNHLM 156 >gi|291278966|ref|YP_003495801.1| DNA repair protein RadC [Deferribacter desulfuricans SSM1] gi|290753668|dbj|BAI80045.1| DNA repair protein RadC [Deferribacter desulfuricans SSM1] Length = 232 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +V S G+++ +E+ ++ L A ++IL HNHPSGN PS +DI Sbjct: 136 VFLDSKGRIKEYKVLSSGSVNESYFPPKELAKQALVRDAVAVILAHNHPSGNLKPSQSDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+N+ L ++I + DHII+ K+ F+SFK ++ Sbjct: 196 RYTKNVKNALELVDIALVDHIIVTKNGFLSFKQEELL 232 >gi|158522926|ref|YP_001530796.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3] gi|158511752|gb|ABW68719.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3] Length = 167 Score = 117 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 61/97 (62%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N ++A E G++ VY REI++R + L ++++++ HNHP+G+P PS D Sbjct: 55 LYLDTKNRILAMEKMFTGSLSSTAVYPREIIKRVIALKSSAVVITHNHPTGDPGPSVEDT 114 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L +N+ +HDHII+G + + SF +I Sbjct: 115 RITIRLLVALKSMNVDLHDHIIVG-EGYYSFADAGVI 150 >gi|315225157|ref|ZP_07866974.1| DNA repair protein RadC [Capnocytophaga ochracea F0287] gi|314944840|gb|EFS96872.1| DNA repair protein RadC [Capnocytophaga ochracea F0287] Length = 225 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I G I H V +R + + LE A ++ILVHNHPSG+ PS DI Sbjct: 129 LYLNSTNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGSITPSKEDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +TQ + T + L+I + DH+I+ + ++S R+ Sbjct: 189 ELTQRVKTAGDMLDIKLLDHVIVTEKEYLSLLDERL 224 >gi|134296674|ref|YP_001120409.1| DNA repair protein RadC [Burkholderia vietnamiensis G4] gi|172044368|sp|A4JH21|Y2579_BURVG RecName: Full=UPF0758 protein Bcep1808_2579 gi|134139831|gb|ABO55574.1| DNA replication and repair protein RadC [Burkholderia vietnamiensis G4] Length = 258 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI E +RG++ + VY REIV+R L L+A S+I+ HNHPSG PS D Sbjct: 162 LYLDARHGLIEVEESARGSLTRMAVYPREIVRRALMLNAASLIIAHNHPSGAVQPSAEDR 221 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++ + DH+++G SF + Sbjct: 222 RLTRVLHEALALVDAKLLDHVVVGTADTFSFARAGWL 258 >gi|317407831|gb|EFV87757.1| hypothetical protein HMPREF0005_03171 [Achromobacter xylosoxidans C54] Length = 165 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD +IA E RGT+ VY RE+V+ + +A SI++ HNHPSG+ PS AD+ Sbjct: 69 MFLDAQLRMIAFEEMFRGTLSETSVYPREVVKAAIRHNAHSILIAHNHPSGSSQPSKADV 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + +N+ + DH+I+ + S + I Sbjct: 129 EVTRRLKEAVALVNVTLVDHVIVAAGSGHSMAKMGWI 165 >gi|293537093|ref|ZP_06671773.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus M1015] gi|290919938|gb|EFD97006.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus M1015] Length = 228 Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 49/96 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ PS DI Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIII + F S Sbjct: 188 ITTMRLKECGLILGIDLLDHIIISDNRFTSLVEAGY 223 >gi|82751250|ref|YP_416991.1| DNA repair protein RadC [Staphylococcus aureus RF122] gi|123547872|sp|Q2YT78|Y1521_STAAB RecName: Full=UPF0758 protein SAB1521c gi|82656781|emb|CAI81210.1| DNA repair protein homolog [Staphylococcus aureus RF122] Length = 228 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 51/96 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ PS DI Sbjct: 128 LLLNSKNVVIKESCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + + L I + DHIIIG + F S Sbjct: 188 ITTMRLKESGLILGIDLLDHIIIGDNRFTSLVEAGY 223 >gi|225164735|ref|ZP_03726969.1| DNA repair protein-like protein [Opitutaceae bacterium TAV2] gi|224800656|gb|EEG19018.1| DNA repair protein-like protein [Opitutaceae bacterium TAV2] Length = 246 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 7/104 (6%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ L+ + GT + + RE+ + + +A+++ILVHNHPSG+P PS AD Sbjct: 143 LCLNARMRLLRCVEITSGTANSTLCHAREVFRDAIREAASALILVHNHPSGDPMPSSADT 202 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-------KDAFVSFKGLRII 97 +T+ + L I + DH+I+G F SF+ + ++ Sbjct: 203 ALTRRLRQASEVLEIKLVDHVIVGSPEADPTGRGFFSFREMGLV 246 >gi|237736936|ref|ZP_04567417.1| DNA repair protein radC [Fusobacterium mortiferum ATCC 9817] gi|229420798|gb|EEO35845.1| DNA repair protein radC [Fusobacterium mortiferum ATCC 9817] Length = 225 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ NIL+ E GTID VY REI+++ ++ A +I HNHPSGN PS DI Sbjct: 129 IFLNNFNILVGSETLFVGTIDKSAVYPREILEKVIQYKAKGVIFAHNHPSGNLRPSKQDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ L +++ + +HIII KD + SF +I Sbjct: 189 QITEHMQEVLEMIDVKLLEHIIITKDGYFSFLQEGLI 225 >gi|189499793|ref|YP_001959263.1| DNA repair protein RadC [Chlorobium phaeobacteroides BS1] gi|238692279|sp|B3EP05|Y831_CHLPB RecName: Full=UPF0758 protein Cphamn1_0831 gi|189495234|gb|ACE03782.1| DNA repair protein RadC [Chlorobium phaeobacteroides BS1] Length = 223 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I+ + S GT++ ++ REI + + S+ +IILVHNHPSG+ PS+AD Sbjct: 126 LHLNTKNQIISHHLISVGTLNASLIHPREIYKSAIRESSHAIILVHNHPSGDVEPSNADK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + L I + DHII G+DA+ SF+ ++ Sbjct: 186 QVTSILEHAGSILQINLLDHIITGRDAWFSFREHELL 222 >gi|224540956|ref|ZP_03681495.1| hypothetical protein CATMIT_00107 [Catenibacterium mitsuokai DSM 15897] gi|224526107|gb|EEF95212.1| hypothetical protein CATMIT_00107 [Catenibacterium mitsuokai DSM 15897] Length = 226 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 40/92 (43%), Positives = 58/92 (63%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD HN LIA++ G+++ V REI + L + SII VHNHPSG+ +PS DI+M Sbjct: 128 LDNHNRLIAEKTLFIGSVNMSIVSAREIFREALAFNGVSIICVHNHPSGDAHPSSEDISM 187 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 TQ ++ +N+ + DHIIIG++ + SFK Sbjct: 188 TQKLVDLGKMMNVDIVDHIIIGRNQYYSFKAE 219 >gi|298207705|ref|YP_003715884.1| putative DNA repair protein [Croceibacter atlanticus HTCC2559] gi|83850342|gb|EAP88210.1| putative DNA repair protein [Croceibacter atlanticus HTCC2559] Length = 231 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I S+G I V +R + + L++ A +IILVHNHPSG S AD Sbjct: 135 VYLNNSNKVIQQTQLSKGGITGTLVDVRLLFKMVLQVGAVAIILVHNHPSGTLKASQADK 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+I V DH+I+ + A+ SF I+ Sbjct: 195 QLTEKLKLAGQSLDIKVLDHVIVTQKAYFSFADNGIL 231 >gi|313903074|ref|ZP_07836468.1| DNA repair protein RadC [Thermaerobacter subterraneus DSM 13965] gi|313466576|gb|EFR62096.1| DNA repair protein RadC [Thermaerobacter subterraneus DSM 13965] Length = 299 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 56/95 (58%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + ++ ++ S GT++ V+ RE+ + + A +++LVHNHPSG+P PS D+ + Sbjct: 202 LNTKHYVLGVDLISIGTLNGSLVHPREVFRAAVRRGAAALVLVHNHPSGDPTPSPEDVQV 261 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ + I V DH+IIG + S + ++ Sbjct: 262 TRRLVEAGRIMGIDVLDHVIIGNQRYASLREAGLV 296 >gi|254283335|ref|ZP_04958303.1| DNA repair protein RadC [gamma proteobacterium NOR51-B] gi|219679538|gb|EED35887.1| DNA repair protein RadC [gamma proteobacterium NOR51-B] Length = 223 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 38/95 (40%), Positives = 54/95 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N LI E GTID V+ RE+V+ L A S+I+ HNHPSG PS+ D Sbjct: 127 LYLDSRNRLIVAEDLFAGTIDGAAVFPREVVRGALLHDAASVIVAHNHPSGALAPSEQDR 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + + L+ ++I + DH I+G VS L Sbjct: 187 QLTRRLSSALSLVDIRLLDHFIVGFGDSVSLASLG 221 >gi|269468964|gb|EEZ80545.1| DNA repair protein RadC [uncultured SUP05 cluster bacterium] Length = 226 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 2/97 (2%) Query: 1 LFLDKHNILIADE-VQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59 L LD+ + LI GT++ ++ RE+V+ LE +A+++IL HNHPSG+P PS AD Sbjct: 128 LLLDQKHRLIEKVITLFTGTLNQASIHPREVVKTVLEKNASAVILAHNHPSGDPAPSQAD 187 Query: 60 INMTQNIITTLNPLNIIVHDHIIIGKDAFV-SFKGLR 95 I++TQ I L +++ V DH+IIG S Sbjct: 188 IDITQRIKEALALIDVRVLDHVIIGDGGRFESLAQSG 224 >gi|15894524|ref|NP_347873.1| DNA repair protein RadC [Clostridium acetobutylicum ATCC 824] gi|25009038|sp|Q97JN2|Y1241_CLOAB RecName: Full=UPF0758 protein CA_C1241 gi|15024167|gb|AAK79213.1|AE007637_3 RadC protein ortholog [Clostridium acetobutylicum ATCC 824] gi|325508656|gb|ADZ20292.1| DNA repair protein RadC [Clostridium acetobutylicum EA 2018] Length = 229 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ NI+I S G+++ V+ RE+ + A SIIL HNHPSG+P PS+ D+ Sbjct: 133 IMLNTKNIVIKISDVSVGSLNSSIVHPREVYVEPILKHAASIILCHNHPSGDPKPSNEDL 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ + + I + DHIIIG ++S K ++ Sbjct: 193 NITKRLYECSKFIGIELLDHIIIGDGIYISLKEEGLL 229 >gi|317402956|gb|EFV83496.1| DNA repair protein radC [Achromobacter xylosoxidans C54] Length = 225 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD LIA +RGT+ VY RE+V+ L A ++I+ HNHPSG PS AD Sbjct: 129 LYLDSRLRLIASGELARGTLSQASVYPREVVREALRHHAAALIVAHNHPSGLAEPSAADQ 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+++ L +++ + DH+II D S L I Sbjct: 189 AFTRHLKQALALVDVALIDHLIIAGDTVTSMAELGRI 225 >gi|297621459|ref|YP_003709596.1| DNA repair protein radC family [Waddlia chondrophila WSU 86-1044] gi|297376760|gb|ADI38590.1| DNA repair protein radC family [Waddlia chondrophila WSU 86-1044] Length = 231 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD LI ++ S GT+ H + RE+ + A S+++ HNHPSG+P PS DI Sbjct: 128 LLLDTKGDLITQKIISIGTLSHTLAHPREVFFDAVRHKAASLVIAHNHPSGDPTPSRHDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 MT +I + I + DH+IIG FVS + + + Sbjct: 188 EMTAQLIKAGELMGIPLQDHLIIGSRTFVSLREIGL 223 >gi|124514541|gb|EAY56054.1| DNA repair proteins (RadC) [Leptospirillum rubarum] Length = 412 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 53/95 (55%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L++ + I S G++ V+ RE + SA ++I +HNHPSG+P PS D+N+ Sbjct: 127 LNQRHQPIDLHRISEGSLSMTLVHPREAFSPAIRDSAAAVIFLHNHPSGDPEPSIDDLNL 186 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + + L I V DH+++G FVS ++ Sbjct: 187 TRRLGESGDILGIRVLDHVVLGDGRFVSLADQGVL 221 >gi|313677180|ref|YP_004055176.1| DNA replication and repair protein radc [Marivirga tractuosa DSM 4126] gi|312943878|gb|ADR23068.1| DNA replication and repair protein RadC [Marivirga tractuosa DSM 4126] Length = 234 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + +++ N +I + S G I ++ I + ++ A+++IL HNHPSGN NPS+ D+ Sbjct: 138 IMMNRANRVIRMKRISSGGISGTVADVKIIFKEAIDQMASALILAHNHPSGNRNPSEQDV 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L+I V DHII +D + SF ++ Sbjct: 198 RLTRKMKESGQLLDIPVLDHIIFAEDKYYSFADEAML 234 >gi|322389482|ref|ZP_08063034.1| DNA repair protein RadC [Streptococcus parasanguinis ATCC 903] gi|321143860|gb|EFX39286.1| DNA repair protein RadC [Streptococcus parasanguinis ATCC 903] Length = 227 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + GT++ REI+ L+ ATSIIL HNHPSG PS D Sbjct: 129 LYLNTQNEIIHQQTIFIGTVNRSIAEPREILHYALKHMATSIILAHNHPSGAVFPSKNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T +I + + + DH+I+ ++ + S++ Sbjct: 189 EVTHRVIEACEVMGLTLLDHLIVSEENYYSYREE 222 >gi|163754488|ref|ZP_02161610.1| putative DNA repair protein [Kordia algicida OT-1] gi|161325429|gb|EDP96756.1| putative DNA repair protein [Kordia algicida OT-1] Length = 145 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N ++ S+G V + + L+ +A+SII+ HNHPSGN NPS++D Sbjct: 48 LLLNRSNQVLGIYPLSKGGTASTVVDAKLVFSVALKCNASSIIIAHNHPSGNLNPSESDK 107 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L I + DH+I+ KD F SF ++ Sbjct: 108 SITEKLKKAAKYLEITLLDHLIVTKDDFFSFNDNGLL 144 >gi|326793822|ref|YP_004311642.1| DNA repair protein RadC [Marinomonas mediterranea MMB-1] gi|326544586|gb|ADZ89806.1| DNA repair protein RadC [Marinomonas mediterranea MMB-1] Length = 224 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI + GTID VY REIV+ L +A +II+ HNHPSG PS +DI Sbjct: 128 LFLDSQHRLIRYQELFHGTIDSAAVYPREIVKAALINNAAAIIVAHNHPSGVCEPSQSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I L +++ + DH I+G+ +S + Sbjct: 188 HITSRIKKALALIDVALLDHFIVGEGQPLSLAERGYV 224 >gi|125624319|ref|YP_001032802.1| DNA repair protein radC-like protein [Lactococcus lactis subsp. cremoris MG1363] gi|229485554|sp|A2RLC4|Y1515_LACLM RecName: Full=UPF0758 protein llmg_1515 gi|124493127|emb|CAL98091.1| DNA repair protein radC homolog [Lactococcus lactis subsp. cremoris MG1363] Length = 227 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 47/93 (50%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD N +I + G +H REI+ ++ + +++ HNHPSGN PS AD Sbjct: 130 YLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQPSQADKI 189 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + + I DHII+G + SF+ Sbjct: 190 FTKKIKNACDNIGINFIDHIIVGAGNYYSFRER 222 >gi|291461476|dbj|BAI83358.1| DNA repair protein RadC [Macrococcus caseolyticus] Length = 147 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 50/95 (52%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N E S G+++ ++ RE+ + + +A +IIL HNHPSG+P PS DI Sbjct: 53 LNTKNEPTHIEKVSVGSLNASIIHPREVFKSAILSNAANIILGHNHPSGHPQPSYEDIEA 112 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + I V DHII D+F S K + Sbjct: 113 TKRLYEVGKLIGIDVLDHIIFTDDSFYSLKESGHL 147 >gi|206895219|ref|YP_002247779.1| DNA repair protein [Coprothermobacter proteolyticus DSM 5265] gi|229485550|sp|B5Y6A0|Y1522_COPPD RecName: Full=UPF0758 protein COPRO5265_1522 gi|206737836|gb|ACI16914.1| DNA repair protein [Coprothermobacter proteolyticus DSM 5265] Length = 235 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD+ N I S G+ V +EI+++ SA ++IL+HNHPSG+P+PS D+ Sbjct: 139 LLLDRKNRPIKHVEISVGSSIQTTVDPKEILKQVSLTSAQALILIHNHPSGDPSPSREDV 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + DHII+GK+ VS ++I Sbjct: 199 AVTKQLKQACELVGAQLLDHIIVGKNQHVSLAREKLI 235 >gi|188996570|ref|YP_001930821.1| DNA repair protein RadC [Sulfurihydrogenibium sp. YO3AOP1] gi|188931637|gb|ACD66267.1| DNA repair protein RadC [Sulfurihydrogenibium sp. YO3AOP1] Length = 229 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA EV ++G+++ V V R+I+ ++ + II+ HNHP+ +P PS DI Sbjct: 133 LYLNSSNHLIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + T N L + DHII+GK F SF +I Sbjct: 193 EFTKKLQTLANELGFDLLDHIIVGKKDFYSFAKAGLI 229 >gi|149280605|ref|ZP_01886720.1| DNA repair protein [Pedobacter sp. BAL39] gi|149228650|gb|EDM34054.1| DNA repair protein [Pedobacter sp. BAL39] Length = 232 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N +I + S+G + + I + LE +A +IIL HNHPSGN PS D+ Sbjct: 136 LLLNRANHVIGNFQISKGGLSGTVADPKVIFKTALEHNAAAIILSHNHPSGNCKPSADDL 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ I+ L++ V DH+I+ SF +I Sbjct: 196 SITKKIVAAGKVLDLPVIDHLIVTNKMCFSFTDEGLI 232 >gi|301163985|emb|CBW23540.1| putative DNA repair protein [Bacteroides fragilis 638R] Length = 148 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ N ++ + S G I V +R I+Q L ++ +IIL HNHPSGN PS D+ Sbjct: 52 LFLNQSNQVLGYTLISEGGITDTTVDVRVILQAALLTNSVAIILAHNHPSGNTKPSRQDM 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + IIV DH+I+ + SF + Sbjct: 112 EITKQVKEAARLMRIIVTDHLILTDAGYYSFADEGQL 148 >gi|119357420|ref|YP_912064.1| DNA repair protein RadC [Chlorobium phaeobacteroides DSM 266] gi|119354769|gb|ABL65640.1| DNA repair protein RadC [Chlorobium phaeobacteroides DSM 266] Length = 166 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 1/96 (1%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FL N + ++ SRGT++ ++ RE+ + + +A +IILVHNHPSGNP PS+AD Sbjct: 69 FLSTKNYITGTQLVSRGTLNASLIHPREVFRGAILANANAIILVHNHPSGNPEPSNADKQ 128 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRI 96 +T+ I ++ + + I + DH+IIG + SF+ + Sbjct: 129 VTKQIRSSADIIGIELLDHVIIGSNGNHFSFRQEGL 164 >gi|163858086|ref|YP_001632384.1| DNA repair protein radC-like protein [Bordetella petrii DSM 12804] gi|163261814|emb|CAP44116.1| DNA repair protein radC homolog [Bordetella petrii] Length = 177 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ +I S GT+ VY REIV+ L L A +II+ HNHPSG P PS+AD+ Sbjct: 81 LYLNSQFKVIRYMEMSHGTLTQASVYPREIVKTALRLDAAAIIMSHNHPSGIPEPSEADL 140 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+++ L +++ + DHII+ S Sbjct: 141 ALTRHLKHALALVDVRLVDHIIVTGQNTTSLAERG 175 >gi|52549653|gb|AAU83502.1| DNA repair proteins [uncultured archaeon GZfos29E12] Length = 403 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 40/88 (45%), Positives = 57/88 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LI ++ S GT+D+ V+ RE+ + ++ SA +ILVHNHPSG+P PS+ D+ Sbjct: 308 LLLDSKNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVILVHNHPSGDPEPSENDV 367 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAF 88 +TQ I N LNI V DH+II + + Sbjct: 368 EITQKIAKAGNILNIKVLDHVIIAEKGW 395 >gi|75906397|ref|YP_320693.1| DNA repair protein RadC [Anabaena variabilis ATCC 29413] gi|123610894|sp|Q3MGT8|Y172_ANAVT RecName: Full=UPF0758 protein Ava_0172 gi|75700122|gb|ABA19798.1| DNA replication and repair protein RadC [Anabaena variabilis ATCC 29413] Length = 243 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 47/93 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N L+ +V + GT REI + + AT I+ HNHPSGN PS DI Sbjct: 139 LLLDVKNRLLGTQVITIGTATETLASPREIFREIIRQGATRTIVAHNHPSGNVEPSPEDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 +T+ ++ L I + DH+I+G S + Sbjct: 199 ELTRQLLAGAQLLGIPLLDHLILGNGNHQSLRE 231 >gi|301168693|emb|CBW28284.1| putative DNA repair radC-like protein [Haemophilus influenzae 10810] Length = 156 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ + LI EV +G++ + V IREI+++ L+L+A++II+ HNHP+GN PSDAD Sbjct: 60 LFLDRIHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + ++I + DH I+ A F +I Sbjct: 120 YITKRLKEACELMDIKLLDHFIVSGSASFCFTDNHLI 156 >gi|146296473|ref|YP_001180244.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410049|gb|ABP67053.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 160 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + A +RGTI+ V EI +R L + SII+ HNHP G+ PS DI Sbjct: 64 ICLDLQLNVTAVFEVARGTINTALVSTHEIFKRVLLTNCNSIIIAHNHPGGSERPSMDDI 123 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N T+ I L+I ++DHIII ++A+ SF I+ Sbjct: 124 NTTKRIKEAAQLLDIKLNDHIIITENAYFSFAEAGIL 160 >gi|258645224|ref|ZP_05732693.1| DNA repair protein RadC [Dialister invisus DSM 15470] gi|260402574|gb|EEW96121.1| DNA repair protein RadC [Dialister invisus DSM 15470] Length = 227 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 55/96 (57%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FL+ N L+ + G++D PV I+E ++ L A +ILVHNHPSG P PSDADIN Sbjct: 132 FLNTKNRLLGYKEICVGSLDAAPVDIKEAMRWALRFKAHGMILVHNHPSGYPEPSDADIN 191 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + +I + DH+IIG F S ++ Sbjct: 192 LTRQFRRATSFFDIRLLDHVIIGDGEFASLNKNGLV 227 >gi|229115981|ref|ZP_04245376.1| DNA repair protein [Bacillus cereus Rock1-3] gi|228667475|gb|EEL22922.1| DNA repair protein [Bacillus cereus Rock1-3] Length = 150 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 54/95 (56%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +I + GT+D V+ RE + + +A+SI+ HNHPSG+ S D+ + Sbjct: 56 LNTKNEIIGCSIVFEGTVDSSLVHPRETFRTAILNNASSIVCFHNHPSGHSVESHEDVEV 115 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + N + I + DH+IIG++++VS II Sbjct: 116 TKRLKECGNIIGIPLLDHVIIGENSYVSLMKKGII 150 >gi|325689664|gb|EGD31668.1| DNA repair protein RadC [Streptococcus sanguinis SK115] gi|327489851|gb|EGF21641.1| DNA repair protein RadC [Streptococcus sanguinis SK1058] Length = 227 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N ++ + GT+ REI+ L+ ATSIILVHNHPSG+ PS D Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +TQ++ + +++ DH+I+ K + S++ Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223 >gi|254198406|ref|ZP_04904828.1| DNA repair protein [Burkholderia pseudomallei S13] gi|169655147|gb|EDS87840.1| DNA repair protein [Burkholderia pseudomallei S13] Length = 165 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD H+ +IA E G ID + R I+ R + L++T+II+ HNHPSG PS AD Sbjct: 69 IFLDTHHRVIAVEPLFYGGIDGAHISSRVILHRAILLNSTAIIVAHNHPSGETQPSPADQ 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ + DH IIG+ SF ++ Sbjct: 129 RLTAELAALLRLVDMRLLDHFIIGRGEPFSFAQAGLL 165 >gi|270296748|ref|ZP_06202947.1| DNA repair protein [Bacteroides sp. D20] gi|270272735|gb|EFA18598.1| DNA repair protein [Bacteroides sp. D20] Length = 148 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 50/95 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ + ++ + S G I +R I+Q L ++ +IIL HNHPSGN PS D+ Sbjct: 52 LFLNQSSQVLGYTLISEGGITETCADVRVILQAALLTNSVAIILAHNHPSGNLKPSRQDM 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + + I V DH+I+ + SF Sbjct: 112 EITKQVKEAARLMRITVLDHLILTDTGYYSFADEG 146 >gi|325138320|gb|EGC60889.1| DNA repair protein RadC [Neisseria meningitidis ES14902] gi|325142461|gb|EGC64865.1| DNA repair protein RadC [Neisseria meningitidis 961-5945] Length = 209 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ +YIREIV+ L+ A S+I+ HNHP G+P PS DI Sbjct: 112 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 171 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + ++ +++ + DH I+ + SF+ L ++ Sbjct: 172 MFTRRLAQAMSLVDVSLLDHFIVTSQSVRSFRQLGLM 208 >gi|297587677|ref|ZP_06946321.1| DNA repair protein RadC [Finegoldia magna ATCC 53516] gi|297574366|gb|EFH93086.1| DNA repair protein RadC [Finegoldia magna ATCC 53516] Length = 223 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 38/92 (41%), Positives = 58/92 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N +I+ E+ S+GTI+ V+ RE+ + ++ A SIILVHNHPSG+ PS+ADI Sbjct: 127 LLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNADI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 +T+ + + + I V DHII+ +S + Sbjct: 187 EVTKRLDKVGDLVGIQVLDHIIVSSSDSLSMR 218 >gi|298378018|ref|ZP_06987966.1| DNA repair protein RadC [Bacteroides sp. 3_1_19] gi|298265095|gb|EFI06760.1| DNA repair protein RadC [Bacteroides sp. 3_1_19] Length = 225 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI S G I+ PV IR I+++ L +A S I+VHNHPSG PS AD Sbjct: 126 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMRQALYYNAVSFIMVHNHPSGARKPSGADD 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+I + DH+I+ +++ S+ + Sbjct: 186 RLTEAVKKAAETLDIRLLDHVIVAGNSYYSYADEGRL 222 >gi|17229843|ref|NP_486391.1| DNA repair protein RadC [Nostoc sp. PCC 7120] gi|25009016|sp|Q8YUJ5|Y2351_ANASP RecName: Full=UPF0758 protein alr2351 gi|17131443|dbj|BAB74050.1| DNA repair protein [Nostoc sp. PCC 7120] Length = 243 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 47/93 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N L+ +V + GT REI + + AT I+ HNHPSGN PS DI Sbjct: 139 LLLDVKNRLLGTQVITIGTATETLASPREIFREIIRQGATRTIVAHNHPSGNVEPSPEDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 +T+ ++ L I + DH+I+G S + Sbjct: 199 ELTRQLLAGAQLLGIPLLDHLILGNGNHQSLRE 231 >gi|89891670|ref|ZP_01203173.1| DNA repair protein, RadC [Flavobacteria bacterium BBFL7] gi|89516005|gb|EAS18669.1| DNA repair protein, RadC [Flavobacteria bacterium BBFL7] Length = 232 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+++ + ++A SRG V R + Q+ +E +A ++IL HNHPSG PS D Sbjct: 136 LYVNNSHKVLAKHQISRGGFTGTMVDTRIVFQKAVEEAAVAMILAHNHPSGKLMPSMDDK 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ +I +++ V DHII+ +D+F SF ++ Sbjct: 196 RLTQKLIEAGRIMDVKVLDHIIVTRDSFYSFADHNLL 232 >gi|332181204|gb|AEE16892.1| DNA repair protein RadC [Treponema brennaborense DSM 12168] Length = 221 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 52/95 (54%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ +I S GTI+ V+ RE+ ++ A ++IL HNHPSG+ PS+ DI Sbjct: 121 LNGAYEIIKIRSVSVGTINRTVVHPREVFTDAVKDMAAAVILCHNHPSGSEAPSETDIET 180 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ + I + DHII+ + + SFK +I Sbjct: 181 TEKLMIAAEYIGIKILDHIIVTQKTYYSFKEHNLI 215 >gi|229082892|ref|ZP_04215316.1| DNA repair protein [Bacillus cereus Rock4-2] gi|228700430|gb|EEL52992.1| DNA repair protein [Bacillus cereus Rock4-2] Length = 150 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 52/95 (54%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +I + GT+D V+ RE + + +A+SI+ HNHPSG+ S D+ + Sbjct: 56 LNTKNEIIGCSIVFEGTVDSSLVHPRETFRTAILNNASSIVCFHNHPSGHSMESQEDVEV 115 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + I + DH+IIG +++VS II Sbjct: 116 TKRLKECGIIIGIPLLDHVIIGDNSYVSLLKKGII 150 >gi|229113151|ref|ZP_04242647.1| DNA repair protein [Bacillus cereus Rock1-15] gi|228670298|gb|EEL25645.1| DNA repair protein [Bacillus cereus Rock1-15] Length = 146 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 54/95 (56%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +I + S+G+I+ V RE + + +A SI+ HNHPSG+P+ S D+ + Sbjct: 51 LNTKNEIIGCSIVSQGSINSSIVSPRETFRTAILNNAASIVCFHNHPSGSPDASPEDLEV 110 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ L I + DH+IIG+ FVS + I Sbjct: 111 TKRLVECGKILGIELIDHVIIGEHRFVSLREKGCI 145 >gi|324323759|gb|ADY24803.1| DNA repair protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 151 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 54/95 (56%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +I + S+G+I+ V RE + + +A SI+ HNHPSG+P+ S D+ + Sbjct: 56 LNTKNEIIGCSIVSQGSINSSIVSPRETFRTAILNNAASIVCFHNHPSGSPDASPEDLEV 115 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ L I + DH+IIG+ FVS + I Sbjct: 116 TKRLVECGKILGIELIDHVIIGEHRFVSLREKGCI 150 >gi|313896811|ref|ZP_07830358.1| DNA repair protein RadC [Selenomonas sp. oral taxon 137 str. F0430] gi|312974258|gb|EFR39726.1| DNA repair protein RadC [Selenomonas sp. oral taxon 137 str. F0430] Length = 228 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 54/95 (56%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L N +I + SRGT+ V+ RE+ + +A +ILVHNHPSG+P PS D + Sbjct: 134 LTSKNDIIMEAEVSRGTLTRTLVHPREVFVPAIRCAAARVILVHNHPSGDPMPSAEDHRI 193 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ L+I V DHI++G + + SF +I Sbjct: 194 TRILVEAGRLLSIPVVDHIVLGSEGYYSFAEHGLI 228 >gi|170722464|ref|YP_001750152.1| DNA repair protein RadC [Pseudomonas putida W619] gi|169760467|gb|ACA73783.1| DNA repair protein RadC [Pseudomonas putida W619] Length = 164 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +++ ++ G+ID VY R++V + LE +A ++I HNHPSG PS AD Sbjct: 68 LCLDSRHRVLSFDILFTGSIDGASVYPRQVVIKALERNAAAVIFSHNHPSGCSEPSGADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L + + V DHII+G+ +S + Sbjct: 128 VLTTRLTEALALVEVRVLDHIIVGEGTPLSLAEYGWM 164 >gi|189461007|ref|ZP_03009792.1| hypothetical protein BACCOP_01654 [Bacteroides coprocola DSM 17136] gi|198277711|ref|ZP_03210242.1| hypothetical protein BACPLE_03934 [Bacteroides plebeius DSM 17135] gi|237712962|ref|ZP_04543443.1| conserved hypothetical protein [Bacteroides sp. D1] gi|237717796|ref|ZP_04548277.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|319643863|ref|ZP_07998456.1| hypothetical protein HMPREF9011_04059 [Bacteroides sp. 3_1_40A] gi|189432346|gb|EDV01331.1| hypothetical protein BACCOP_01654 [Bacteroides coprocola DSM 17136] gi|198269408|gb|EDY93678.1| hypothetical protein BACPLE_03934 [Bacteroides plebeius DSM 17135] gi|229446937|gb|EEO52728.1| conserved hypothetical protein [Bacteroides sp. D1] gi|229452895|gb|EEO58686.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|317384604|gb|EFV65569.1| hypothetical protein HMPREF9011_04059 [Bacteroides sp. 3_1_40A] Length = 220 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI S G I+ PV IR I+++ L +A S I+VHNHPSG PS AD Sbjct: 121 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADD 180 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+I + DH+I+ + + S+ + Sbjct: 181 RLTEAVKKAAETLDIRLVDHVIVAGNNYYSYADEGRL 217 >gi|56459745|ref|YP_155026.1| RadC family protein [Idiomarina loihiensis L2TR] gi|56178755|gb|AAV81477.1| RadC family protein [Idiomarina loihiensis L2TR] Length = 158 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD+ I GTI+ VY RE+V+ LE A+S++L HNHPSG PS+ADI Sbjct: 63 IFLDEKGHFIEYRELFYGTINAASVYPREVVRAALETKASSLVLSHNHPSGEAEPSNADI 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DHI++GK VSF ++ Sbjct: 123 RLTERLQKALAVIDVEVKDHIVVGK-ECVSFSERGLL 158 >gi|325528992|gb|EGD06011.1| hypothetical protein B1M_03557 [Burkholderia sp. TJI49] Length = 230 Score = 116 bits (292), Expect = 8e-25, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI E +RG++ + VY REI +R L L+A + I+ HNHPSG PS D Sbjct: 134 LYLDARHCLIDVEESARGSLTRMAVYPREIARRALTLNAAAAIVAHNHPSGAVRPSAEDR 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++ + DH+++G SF + Sbjct: 194 RLTRVLRDALALIDTRLLDHVVVGVGDTFSFARAGWL 230 >gi|171779331|ref|ZP_02920295.1| hypothetical protein STRINF_01176 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281948|gb|EDT47379.1| hypothetical protein STRINF_01176 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 226 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I G++ REI+ + ATS+I++HNHPSG+P PS+ D+ Sbjct: 129 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIIHNHPSGSPAPSENDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ + + + I+ DHII+GK + SF+ Sbjct: 189 RFTEKMKRACDDIGIVCLDHIIVGKYQYYSFREE 222 >gi|259501659|ref|ZP_05744561.1| DNA repair protein RadC [Lactobacillus iners DSM 13335] gi|302191133|ref|ZP_07267387.1| DNA repair protein RadC [Lactobacillus iners AB-1] gi|309806315|ref|ZP_07700328.1| DNA repair protein RadC family protein [Lactobacillus iners LactinV 03V1-b] gi|312871933|ref|ZP_07732015.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF 2062A-h1] gi|312873222|ref|ZP_07733278.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF 2052A-d] gi|312874651|ref|ZP_07734675.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF 2053A-b] gi|315653722|ref|ZP_07906642.1| DNA repair protein RadC [Lactobacillus iners ATCC 55195] gi|325911720|ref|ZP_08174127.1| DNA repair protein RadC family protein [Lactobacillus iners UPII 143-D] gi|329921048|ref|ZP_08277571.1| DNA repair protein RadC family protein [Lactobacillus iners SPIN 1401G] gi|259166944|gb|EEW51439.1| DNA repair protein RadC [Lactobacillus iners DSM 13335] gi|308167299|gb|EFO69465.1| DNA repair protein RadC family protein [Lactobacillus iners LactinV 03V1-b] gi|311089881|gb|EFQ48301.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF 2053A-b] gi|311091233|gb|EFQ49621.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF 2052A-d] gi|311092510|gb|EFQ50872.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF 2062A-h1] gi|315489084|gb|EFU78726.1| DNA repair protein RadC [Lactobacillus iners ATCC 55195] gi|325476486|gb|EGC79645.1| DNA repair protein RadC family protein [Lactobacillus iners UPII 143-D] gi|328934955|gb|EGG31444.1| DNA repair protein RadC family protein [Lactobacillus iners SPIN 1401G] Length = 205 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +++D N +IA++V +GT++ ++ R+I + + +A L HNHPS + PS+ DI Sbjct: 109 VYVDVKNKIIAEKVIFKGTLNQAIIHPRDIFRWAIIYNAAGFFLAHNHPSEDLTPSEQDI 168 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + + I DH I+ ++SFK + ++ Sbjct: 169 QVTKKISSVSECMGIRFLDHFIVNTGNYLSFKEMELL 205 >gi|159897836|ref|YP_001544083.1| DNA repair protein RadC [Herpetosiphon aurantiacus ATCC 23779] gi|159890875|gb|ABX03955.1| DNA repair protein RadC [Herpetosiphon aurantiacus ATCC 23779] Length = 231 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 59/94 (62%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N ++ E + G+++ V I E+ + + L+A +II+VHNHPSG+P PS DI + Sbjct: 135 LNTKNHVLKIENVTIGSLNSASVRIAEVFREPIRLNAAAIIVVHNHPSGDPTPSPDDILV 194 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ +I L+I V DH++IG+ +VS + R+ Sbjct: 195 TKQLIQAGQLLDIDVLDHLVIGQARWVSMRERRL 228 >gi|152993869|ref|YP_001359590.1| DNA repair protein RadC [Sulfurovum sp. NBC37-1] gi|151425730|dbj|BAF73233.1| DNA repair protein RadC [Sulfurovum sp. NBC37-1] Length = 219 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 48/95 (50%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + +I GT++ V+ RE+ + A II+ HNHPSG S ADI + Sbjct: 125 LDGASHIINTRTVFIGTLNQSLVHPREVFSDAISDRAAGIIIAHNHPSGTLESSRADIQI 184 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 TQ + + I + DH+I+ K+ + SF ++ Sbjct: 185 TQRLKEVSKLVGIELLDHVILSKNGYYSFSDEGLL 219 >gi|149199804|ref|ZP_01876834.1| DNA repair protein RadC [Lentisphaera araneosa HTCC2155] gi|149137092|gb|EDM25515.1| DNA repair protein RadC [Lentisphaera araneosa HTCC2155] Length = 235 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 6/103 (5%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N L+ S G +D V+ RE+ + L IIL HNHPSG+P+PS DI Sbjct: 131 LLLDTKNRLMRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPSPSPQDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKD------AFVSFKGLRII 97 T+N+I L + V DH+IIG FVS + L ++ Sbjct: 191 ECTKNLIEAGEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233 >gi|146298177|ref|YP_001192768.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101] gi|229485553|sp|A5FMW5|Y413_FLAJ1 RecName: Full=UPF0758 protein Fjoh_0413 gi|146152595|gb|ABQ03449.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101] Length = 229 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I+ S+G I V +R + + LE AT +IL HNHPSG NPS AD Sbjct: 133 LFLNNSNKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHPSGELNPSQADK 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ I T L++ + DH+II + + SF I Sbjct: 193 QITKKIKTAGEILDVKILDHLIITETKYYSFVDEGI 228 >gi|126662279|ref|ZP_01733278.1| DNA repair protein [Flavobacteria bacterium BAL38] gi|126625658|gb|EAZ96347.1| DNA repair protein [Flavobacteria bacterium BAL38] Length = 227 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I S+G I V IR + + E +AT +IL HNHPSG S+AD+ Sbjct: 131 LYLNNSNKVIYKAQLSKGGITGTVVDIRIVFKMAFEQNATGLILSHNHPSGKLIASEADL 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ I L I V DH+II ++ ++SF+ I Sbjct: 191 KITKRIKEAGQTLEIQVLDHLIITENGYLSFQDEGI 226 >gi|68171315|ref|ZP_00544714.1| DNA repair protein RadC [Ehrlichia chaffeensis str. Sapulpa] gi|88658430|ref|YP_507183.1| DNA repair protein RadC [Ehrlichia chaffeensis str. Arkansas] gi|67999266|gb|EAM85917.1| DNA repair protein RadC [Ehrlichia chaffeensis str. Sapulpa] gi|88599887|gb|ABD45356.1| DNA repair protein RadC [Ehrlichia chaffeensis str. Arkansas] Length = 230 Score = 116 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 63/97 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ L+ADE Q GT++ P+Y+REI+++ L L ATSII+ HNHPSG+ PS ADI Sbjct: 134 LYLNTKYKLLADETQDVGTVNQTPLYVREIIKKSLFLEATSIIIAHNHPSGDAKPSKADI 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + + I + DH+I+ +A SFK ++ Sbjct: 194 EITNQLARACSDVGITLIDHVIVTSNAHYSFKTHNLL 230 >gi|300088789|ref|YP_003759311.1| DNA repair protein RadC [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528522|gb|ADJ26990.1| DNA repair protein RadC [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 263 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ S+GT++ V++RE+V+R L L A ++I VHNHPSG P PS D Sbjct: 153 LYLNSQNRIMEIAEMSQGTVNASVVWVREVVERALRLGAAAMIFVHNHPSGVPAPSRQDR 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T++++ +NI DHIIIG + + S ++ Sbjct: 213 DITRDLVFAAATMNIRALDHIIIGDNCYHSLASEGLL 249 >gi|325287028|ref|YP_004262818.1| DNA repair protein RadC [Cellulophaga lytica DSM 7489] gi|324322482|gb|ADY29947.1| DNA repair protein RadC [Cellulophaga lytica DSM 7489] Length = 232 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I S+G I V +R ++++ LE+ A +IL HNHPSG PS AD Sbjct: 136 IYLNNSNKVIHQAQLSKGGITGTLVDVRLVLKQALEIGAIGLILAHNHPSGGLKPSTADK 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L++ V DHIII + + SF ++ Sbjct: 196 QITEKLKNAAAALDMKVLDHIIITQREYFSFADDNLL 232 >gi|312871642|ref|ZP_07731734.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF 3008A-a] gi|311092867|gb|EFQ51219.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF 3008A-a] Length = 205 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +++D N +IA++V +GT++ ++ R+I + + +A L HNHPS + PS+ DI Sbjct: 109 VYVDVKNKIIAEKVIFKGTLNQAIIHPRDIFRWAIIYNAAGFFLAHNHPSEDLTPSEQDI 168 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + + I DH I+ ++SFK + ++ Sbjct: 169 QVTKKISSVSECMGIRFLDHFIVNTGNYLSFKEMELL 205 >gi|225024085|ref|ZP_03713277.1| hypothetical protein EIKCOROL_00953 [Eikenella corrodens ATCC 23834] gi|224943110|gb|EEG24319.1| hypothetical protein EIKCOROL_00953 [Eikenella corrodens ATCC 23834] Length = 233 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L + LIA + SRGT+ VYIRE+ + L A S+I+ HNHP G+ PS AD+ Sbjct: 128 MLLSSSHKLIAFQELSRGTVAENTVYIREVAKLALRYHAASLIIAHNHPGGSTEPSSADL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L L++ + DH I+ + VSF + Sbjct: 188 AFTRRLQQALALLDVRLLDHFIVAGNRAVSFAANGWM 224 >gi|83649174|ref|YP_437609.1| DNA repair protein [Hahella chejuensis KCTC 2396] gi|83637217|gb|ABC33184.1| DNA repair protein [Hahella chejuensis KCTC 2396] Length = 123 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I ++ RGT + V+ REI ++ L L+A ++IL HNHPS N PS DI Sbjct: 27 LFLDNQHRVIEFDLMFRGTYNESTVHTREIAKKALSLNAAAVILAHNHPSQNARPSQRDI 86 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + TL+ L + V DH+IIG SF I+ Sbjct: 87 RLTREVKRTLDLLEVRVLDHVIIGGMEEFSFVENGIL 123 >gi|324992861|gb|EGC24781.1| DNA repair protein RadC [Streptococcus sanguinis SK405] gi|325687499|gb|EGD29520.1| DNA repair protein RadC [Streptococcus sanguinis SK72] gi|325696545|gb|EGD38435.1| DNA repair protein RadC [Streptococcus sanguinis SK160] gi|327460312|gb|EGF06649.1| DNA repair protein RadC [Streptococcus sanguinis SK1057] gi|327462168|gb|EGF08495.1| DNA repair protein RadC [Streptococcus sanguinis SK1] gi|327474473|gb|EGF19879.1| DNA repair protein RadC [Streptococcus sanguinis SK408] Length = 227 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N ++ + GT+ REI+ L+ ATSIILVHNHPSG+ PS D Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +TQ++ + +++ DH+I+ K + S++ Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223 >gi|257126874|ref|YP_003164988.1| DNA repair protein RadC [Leptotrichia buccalis C-1013-b] gi|257050813|gb|ACV39997.1| DNA repair protein RadC [Leptotrichia buccalis C-1013-b] Length = 240 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N L+ +E GTID +YIRE++++ LE +A S+ILVHNHP+G+ PSD+DI Sbjct: 144 LFLNTQNELMKEEELFYGTIDRSTIYIRELIKKILEYNAKSVILVHNHPAGSLKPSDSDI 203 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I + DH+II + + SF I+ Sbjct: 204 LLTKKVKEVFESMEIRLLDHLIISEQGYFSFLEGGIL 240 >gi|326801342|ref|YP_004319161.1| DNA repair protein RadC [Sphingobacterium sp. 21] gi|326552106|gb|ADZ80491.1| DNA repair protein RadC [Sphingobacterium sp. 21] Length = 233 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 36/95 (37%), Positives = 54/95 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ +N +IA E+ S+G V V + + Q L+ AT +IL HNHPSG+ PS AD Sbjct: 137 LLLNTNNRVIAKELISKGGSGVVAVDAKGVFQAVLQAKATGLILSHNHPSGSLRPSMADK 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ I+ L++ V DH+II + + SF Sbjct: 197 QLTKKIVEGGKLLDVRVLDHLIISDEGYYSFLDHG 231 >gi|323442950|gb|EGB00573.1| DNA repair protein RadC [Staphylococcus aureus O46] Length = 223 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 49/96 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ REI + +A +II VHNH SG+ PS DI Sbjct: 123 LLLNSKNVVIKESCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHSSGDVTPSQEDI 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG + F S Sbjct: 183 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 218 >gi|71908755|ref|YP_286342.1| DNA repair protein RadC [Dechloromonas aromatica RCB] gi|123626759|sp|Q47BA9|Y3142_DECAR RecName: Full=UPF0758 protein Daro_3142 gi|71848376|gb|AAZ47872.1| DNA replication and repair protein RadC [Dechloromonas aromatica RCB] Length = 226 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+ E GT+ VY RE+V+ L +A ++IL HNHPSG PS AD Sbjct: 129 LWLDAQNQLLKAEELFTGTLTQTSVYPREVVKAALAHNAAAVILAHNHPSGIAEPSRADE 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRII 97 +T+++ L +++ V DH I+ + +SF ++ Sbjct: 189 MLTRSLKEALAMVDVKVLDHFIVAGNTPPLSFAERGLL 226 >gi|328946264|gb|EGG40408.1| DNA repair protein RadC [Streptococcus sanguinis SK1087] Length = 227 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N ++ + GT+ REI+ L+ ATSIILVHNHPSG+ PS D Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +TQ++ + +++ DH+I+ K + S++ Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223 >gi|327469997|gb|EGF15461.1| DNA repair protein RadC [Streptococcus sanguinis SK330] Length = 227 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N ++ + GT+ REI+ L+ ATSIILVHNHPSG+ PS D Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +TQ++ + +++ DH+I+ K + S++ Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223 >gi|299147411|ref|ZP_07040476.1| DNA repair protein RadC [Bacteroides sp. 3_1_23] gi|298514689|gb|EFI38573.1| DNA repair protein RadC [Bacteroides sp. 3_1_23] Length = 148 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ N ++ S G I V +R I+Q L ++ S+IL HNHPSGN PS DI Sbjct: 52 LFLNQANQVLGYTQISEGGITETSVDVRMILQAALLTNSVSLILAHNHPSGNLKPSTLDI 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + I V DHII+ +++ SF + Sbjct: 112 ELTRCIKEAAKLMRINVLDHIIMTSESYYSFSDEGTL 148 >gi|254520654|ref|ZP_05132710.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA] gi|226914403|gb|EEH99604.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA] Length = 142 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 57/96 (59%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +D N + V S GT++ V+ RE+ + + ++ SII+ HNHPSG+P PS+ DIN Sbjct: 47 CMDIKNQPTSINVVSIGTLNSSLVHPREVFKVAILANSASIIVAHNHPSGDPTPSEEDIN 106 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + I + DH+IIG++ +SFK I+ Sbjct: 107 ITIRLKEAGKIIGIDILDHVIIGENKHISFKEKGIL 142 >gi|319947102|ref|ZP_08021336.1| DNA repair protein RadC [Streptococcus australis ATCC 700641] gi|319747150|gb|EFV99409.1| DNA repair protein RadC [Streptococcus australis ATCC 700641] Length = 227 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 55/94 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I +V GT++ REI+ ++ ATS+ILVHNHPSG +PS D Sbjct: 129 LYLNTQNQIIHQQVIFIGTVNRSIAEPREILHYAIKHMATSLILVHNHPSGIIHPSKNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +TQ +I N L I+ DH+I+ D + S++ Sbjct: 189 GVTQQMIEACNCLGIVFLDHLIVSTDDYYSYREE 222 >gi|125718039|ref|YP_001035172.1| DNA repair protein RadC [Streptococcus sanguinis SK36] gi|229485572|sp|A3CN67|Y1218_STRSV RecName: Full=UPF0758 protein SSA_1218 gi|125497956|gb|ABN44622.1| DNA repair protein radC, putative [Streptococcus sanguinis SK36] Length = 227 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N ++ + GT+ REI+ L+ ATSIILVHNHPSG+ PS D Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +TQ++ + +++ DH+I+ K + S++ Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223 >gi|171316763|ref|ZP_02905975.1| DNA repair protein RadC [Burkholderia ambifaria MEX-5] gi|171098113|gb|EDT42928.1| DNA repair protein RadC [Burkholderia ambifaria MEX-5] Length = 258 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI E +RG++ + VY REIV+R L L+A ++I+ HNHPSG PS D Sbjct: 162 LYLDARHGLIDVEESARGSLTRMAVYPREIVRRALVLNAAALIVAHNHPSGAVQPSAEDR 221 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++ + DH+++G SF + Sbjct: 222 RLTRVLHEALALIDAKLLDHVVVGTADTFSFARAGWL 258 >gi|73749140|ref|YP_308379.1| RadC family DNA repair protein [Dehalococcoides sp. CBDB1] gi|289433114|ref|YP_003462987.1| DNA repair protein RadC [Dehalococcoides sp. GT] gi|73660856|emb|CAI83463.1| DNA repair protein, RadC family [Dehalococcoides sp. CBDB1] gi|288946834|gb|ADC74531.1| DNA repair protein RadC [Dehalococcoides sp. GT] Length = 272 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + ++ GT+ + RE++ + +A+++I VHNHPSG PS AD Sbjct: 143 IYLDSQHRVLDVADLFCGTVASGCIVPREVIAAAISKNASALIFVHNHPSGKTEPSQADK 202 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ ++ + I DHIIIG + + SF I+ Sbjct: 203 DVTRELVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 239 >gi|25011219|ref|NP_735614.1| DNA repair protein RadC [Streptococcus agalactiae NEM316] gi|76797900|ref|ZP_00780162.1| DNA repair protein radC-like protein [Streptococcus agalactiae 18RS21] gi|77408712|ref|ZP_00785444.1| DNA repair protein RadC [Streptococcus agalactiae COH1] gi|77410546|ref|ZP_00786907.1| DNA repair protein RadC [Streptococcus agalactiae CJB111] gi|39931967|sp|Q8E564|Y1168_STRA3 RecName: Full=UPF0758 protein gbs1168 gi|23095643|emb|CAD46827.1| Unknown [Streptococcus agalactiae NEM316] gi|76586737|gb|EAO63233.1| DNA repair protein radC-like protein [Streptococcus agalactiae 18RS21] gi|77163494|gb|EAO74444.1| DNA repair protein RadC [Streptococcus agalactiae CJB111] gi|77172687|gb|EAO75824.1| DNA repair protein RadC [Streptococcus agalactiae COH1] Length = 226 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 58/94 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +++D N +I GT+ REI+ + ATS+I++HNHPSG+PNPS++D+ Sbjct: 129 IYMDTQNRIIEQRTIFIGTVRRSVAEPREILHYACKNMATSLIIIHNHPSGSPNPSESDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 + T+ I + + L I+ DHII+GK+ + SF+ Sbjct: 189 SFTKKIKRSCDHLGIVCLDHIIVGKNKYYSFREE 222 >gi|237756348|ref|ZP_04584898.1| DNA repair protein RadC [Sulfurihydrogenibium yellowstonense SS-5] gi|237691499|gb|EEP60557.1| DNA repair protein RadC [Sulfurihydrogenibium yellowstonense SS-5] Length = 152 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA EV ++G+++ V V R+I+ ++ + II+ HNHP+ +P PS DI Sbjct: 56 LYLNSSNHLIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQEDI 115 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + T N L + DHII+GK F SF +I Sbjct: 116 EFTKKLQTLANELGFDLLDHIIVGKKDFYSFAKEGLI 152 >gi|255994109|ref|ZP_05427244.1| DNA repair protein RadC [Eubacterium saphenum ATCC 49989] gi|255993777|gb|EEU03866.1| DNA repair protein RadC [Eubacterium saphenum ATCC 49989] Length = 230 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ +IA E S G + + RE+ + ++ +A+S+ILVHNHPSG PSD D+ Sbjct: 128 VMLNTAKHVIAKERISIGGLACAYAHPREVFKSAIKKAASSVILVHNHPSGCVTPSDEDV 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I + I V DHIIIG + ++S K I Sbjct: 188 LITKRLINAGRIIGIEVIDHIIIGNENYLSMKKEGYI 224 >gi|269836380|ref|YP_003318608.1| DNA repair protein RadC [Sphaerobacter thermophilus DSM 20745] gi|269785643|gb|ACZ37786.1| DNA repair protein RadC [Sphaerobacter thermophilus DSM 20745] Length = 240 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 55/94 (58%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD N ++ +G+++ V + E+ + + L+A +I ++HNHPSG+P PS AD+ + Sbjct: 140 LDTKNRVLRTVTLYQGSVNSAQVRVAEVFRDAVRLNAPAIAILHNHPSGDPTPSAADVAL 199 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T ++ L I + DH+I+G + F S + + + Sbjct: 200 TAQLVQAAQLLGIDLLDHLIVGHNQFRSLRRMGL 233 >gi|298375029|ref|ZP_06984986.1| DNA repair protein RadC [Bacteroides sp. 3_1_19] gi|298267529|gb|EFI09185.1| DNA repair protein RadC [Bacteroides sp. 3_1_19] Length = 225 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI S G I+ PV IR I+++ L +A S I+VHNHPSG PS AD Sbjct: 126 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADD 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+I + DH+I+ + + S+ + Sbjct: 186 RLTEAVKKAAETLDIRLLDHVIVAGNIYYSYADEGRL 222 >gi|313891737|ref|ZP_07825342.1| DNA repair protein RadC [Dialister microaerophilus UPII 345-E] gi|313119731|gb|EFR42918.1| DNA repair protein RadC [Dialister microaerophilus UPII 345-E] Length = 227 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 53/96 (55%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +L+ N L+ +RG + V I+E ++ L A +IILVHNHPSG P+PS DI Sbjct: 132 YLNIKNKLLGYREITRGGLQETVVDIKEALKWALRFKAYAIILVHNHPSGVPDPSREDIR 191 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L+I+V DHIIIG F S + + Sbjct: 192 TTERFVKAGKILDIVVLDHIIIGDGNFKSLAEMGYV 227 >gi|58337108|ref|YP_193693.1| DNA repair protein [Lactobacillus acidophilus NCFM] gi|227903680|ref|ZP_04021485.1| DNA repair protein [Lactobacillus acidophilus ATCC 4796] gi|58254425|gb|AAV42662.1| DNA repair protein [Lactobacillus acidophilus NCFM] gi|227868567|gb|EEJ75988.1| DNA repair protein [Lactobacillus acidophilus ATCC 4796] Length = 207 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L++D N +IA++ +GT++ + REI + + + I +VHNHPSG PS +D Sbjct: 111 LYIDNSNHIIAEKKLFQGTLNRSFAHPREIFRWAVIYGCSGIFIVHNHPSGKLTPSSSDF 170 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+++ + I DH I+G+ ++S + ++ Sbjct: 171 ELTEDLFEAAKMMKIDFLDHFIVGQGRYLSMREEKL 206 >gi|319410519|emb|CBY90882.1| putative DNA repair protein RadC [Neisseria meningitidis WUE 2594] Length = 225 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ +YIREIV+ L+ A S+I+ HNHP G+P PS DI Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + ++ +++ + DH I+ SF+ ++ Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTAQTVRSFRQFGLM 224 >gi|325694464|gb|EGD36373.1| DNA repair protein RadC [Streptococcus sanguinis SK150] Length = 227 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N ++ + GT+ REI+ L+ ATSIILVHNHPSG+ PS D Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +TQ++ + +++ DH+I+ K + S++ Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223 >gi|269203278|ref|YP_003282547.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ED98] gi|296274911|ref|ZP_06857418.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus MR1] gi|262075568|gb|ACY11541.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ED98] Length = 228 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 49/96 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ PS DI Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L + DHIIIG + F S Sbjct: 188 ITTMRLKECGLILGKDLLDHIIIGDNRFTSLVEAGY 223 >gi|320530858|ref|ZP_08031895.1| putative DNA repair protein RadC [Selenomonas artemidis F0399] gi|320136892|gb|EFW28837.1| putative DNA repair protein RadC [Selenomonas artemidis F0399] Length = 228 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 36/95 (37%), Positives = 54/95 (56%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L N +I + SRGT+ V+ RE+ + +A IILVHNHPSG+P PS D + Sbjct: 134 LTSKNDIIMEAEVSRGTLTRTLVHPREVFVPAIRCAAARIILVHNHPSGDPMPSAEDHRI 193 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ L+I V DHI++G + + SF +I Sbjct: 194 TRILVEAGRLLSIPVVDHIVLGSEGYYSFAEHGLI 228 >gi|300071102|gb|ADJ60502.1| DNA repair protein RadC [Lactococcus lactis subsp. cremoris NZ9000] Length = 217 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 47/93 (50%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD N +I + G +H REI+ ++ + +++ HNHPSGN PS AD Sbjct: 120 YLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQPSQADKI 179 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + + I DHII+G + SF+ Sbjct: 180 FTKKIKNACDNIGINFIDHIIVGAGNYYSFRER 212 >gi|253723696|ref|YP_003023982.1| RadC DNA repair protein [Photobacterium damselae subsp. piscicida] gi|251752760|dbj|BAH83633.1| RadC DNA repair protein [Photobacterium damselae subsp. piscicida] Length = 156 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI +GTID VY RE+V+ L+ + ++IL HNHPSG PS +D Sbjct: 60 LILDNQHRLIEAVELFQGTIDSASVYPREVVKSVLKHNGAAVILAHNHPSGVATPSSSDR 119 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L +++ DHI++ + +F II Sbjct: 120 RITRRIKDALELVDVRTLDHIVVSVEETYAFSEHGII 156 >gi|147669902|ref|YP_001214720.1| DNA repair protein RadC [Dehalococcoides sp. BAV1] gi|146270850|gb|ABQ17842.1| DNA repair protein RadC [Dehalococcoides sp. BAV1] Length = 272 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + ++ GT+ + RE++ + +A+++I VHNHPSG PS AD Sbjct: 143 IYLDSQHRVLDVADLFCGTVASGCIVPREVIAAAISKNASALIFVHNHPSGKTEPSQADK 202 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ ++ + I DHIIIG + + SF I+ Sbjct: 203 DVTRELVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 239 >gi|314933816|ref|ZP_07841181.1| DNA repair protein RadC [Staphylococcus caprae C87] gi|313653966|gb|EFS17723.1| DNA repair protein RadC [Staphylococcus caprae C87] Length = 227 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 49/96 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I +GT++ ++ RE+ + S+ +II+VHNHPSG+ PS DI Sbjct: 128 LLLNSKNKVIKQSWIFKGTLNSSIIHPREVFNIAIRESSNAIIIVHNHPSGDVTPSREDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I V DHIIIG + F S Sbjct: 188 TTTLRLKECGAILGIDVLDHIIIGDNQFTSLVEAGY 223 >gi|324991114|gb|EGC23048.1| DNA repair protein RadC [Streptococcus sanguinis SK353] gi|324994499|gb|EGC26412.1| DNA repair protein RadC [Streptococcus sanguinis SK678] Length = 227 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N ++ + GT+ REI+ L+ ATSIILVHNHPSG+ PS D Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVIPSRNDD 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +TQ++ + +++ DH+I+ K + S++ Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223 >gi|237725031|ref|ZP_04555512.1| DNA repair protein [Bacteroides sp. D4] gi|229436769|gb|EEO46846.1| DNA repair protein [Bacteroides dorei 5_1_36/D4] Length = 153 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ N ++ + S G I V +R I+Q L ++ ++IL HNHPSGN PS D+ Sbjct: 57 LFLNQSNKVLGYTLISEGGITDTTVDVRVILQAALLTNSIALILAHNHPSGNLKPSRQDM 116 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I V DH+I+ + SF + Sbjct: 117 EITKQVKEAARLMRITVTDHLILTDAGYYSFADEGQL 153 >gi|270308617|ref|YP_003330675.1| DNA repair protein [Dehalococcoides sp. VS] gi|270154509|gb|ACZ62347.1| DNA repair protein [Dehalococcoides sp. VS] Length = 275 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + ++ GT+ + RE++ + +A+++I VHNHPSG PS AD Sbjct: 146 IYLDSQHRVLELADLFTGTVASGSIVPREVIAAAISQNASALIFVHNHPSGKIEPSQADK 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ ++ + I DHIIIG + + SF I+ Sbjct: 206 DVTRELVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 242 >gi|239625122|ref|ZP_04668153.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239519352|gb|EEQ59218.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 159 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 51/95 (53%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L +A E+ + G ++ V +R+I + L +A +I HNHPSG+P P AD + Sbjct: 56 LSTKLEPLALEIAAVGGLNTCSVDVRDIFKHSLLNNAAYVICFHNHPSGDPEPGLADKQI 115 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I L I + DHII+G+ F SF+ +I Sbjct: 116 TRKIEDGGQLLGIPLIDHIIVGETGFYSFRENGLI 150 >gi|170697688|ref|ZP_02888776.1| DNA repair protein RadC [Burkholderia ambifaria IOP40-10] gi|170137436|gb|EDT05676.1| DNA repair protein RadC [Burkholderia ambifaria IOP40-10] Length = 258 Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI E +RG++ + VY REIV+R L L+A ++I+ HNHPSG PS D Sbjct: 162 LYLDARHGLIDVEESARGSLTRLAVYPREIVRRALVLNAAALIIAHNHPSGAVQPSAEDR 221 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++ + DH+++G SF + Sbjct: 222 RLTRVLHEALALVDAKLLDHVVVGTADTFSFARAGWL 258 >gi|325294835|ref|YP_004281349.1| DNA repair protein RadC [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065283|gb|ADY73290.1| DNA repair protein RadC [Desulfurobacterium thermolithotrophum DSM 11699] Length = 226 Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 54/95 (56%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ LI+ ++G ++ + +E+ ++ A ++IL HNHPSG+P PS DI + Sbjct: 132 LNTKGKLISIHEITKGGMNFTSISPKEVFHPAVKDMAAAVILFHNHPSGDPTPSKEDIEV 191 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I+ L I V DHI++ +++ SFK ++ Sbjct: 192 TKRILEGAYLLEIEVLDHIVLSSNSYFSFKKEGLL 226 >gi|269123054|ref|YP_003305631.1| DNA repair protein RadC [Streptobacillus moniliformis DSM 12112] gi|268314380|gb|ACZ00754.1| DNA repair protein RadC [Streptobacillus moniliformis DSM 12112] Length = 211 Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+ + N+LI DE GTID VY+REIV+ L+ +A SII+VHNHPSGN PS+ D Sbjct: 115 LYFNTKNVLIKDENIFYGTIDKSVVYVREIVKNILKYNAKSIIIVHNHPSGNLEPSNDDR 174 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II L +++ + DHIII + SF I Sbjct: 175 CLTKKIIDVLKLIDVRLSDHIIISNKGYYSFLENGQI 211 >gi|188585153|ref|YP_001916698.1| DNA repair protein RadC [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349840|gb|ACB84110.1| DNA repair protein RadC [Natranaerobius thermophilus JW/NM-WN-LF] Length = 241 Score = 115 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ + L+ ++ S G+++ V+ RE+ R + SA +ILVHNHPSG+P PS DI Sbjct: 145 VMLNTKSYLLKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPEPSQDDI 204 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF-KGLRI 96 +T ++ + L I + DH+IIG F SF + + Sbjct: 205 KLTNRLVAAGDLLGIPIMDHVIIGHQKFYSFSRENHL 241 >gi|255530732|ref|YP_003091104.1| DNA repair protein RadC [Pedobacter heparinus DSM 2366] gi|255343716|gb|ACU03042.1| DNA repair protein RadC [Pedobacter heparinus DSM 2366] Length = 232 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N +I ++ S+G + + I + LE +ATSIIL HNHPSGN PS D+ Sbjct: 136 LILNQANYIIGKQLISKGGMAGTVADPKVIFKTALEHNATSIILAHNHPSGNLKPSAQDL 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ ++ L++ V DH+I+ F SF +I Sbjct: 196 SITKKMVEAGKMLDLPVLDHLIVTNKLFFSFGDEGLI 232 >gi|46447399|ref|YP_008764.1| putative DNA repair protein radC [Candidatus Protochlamydia amoebophila UWE25] gi|81697594|sp|Q6MAB0|Y1765_PARUW RecName: Full=UPF0758 protein pc1765 gi|46401040|emb|CAF24489.1| putative DNA repair protein radC [Candidatus Protochlamydia amoebophila UWE25] Length = 231 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F D LI EV S G++ V+ RE+ + A S+I+VHNHPSG+P PS+ D+ Sbjct: 133 IFQDTKGYLITYEVISIGSLSQTLVHPREVFYSAIRHKAASLIVVHNHPSGDPMPSNQDL 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ ++ L I + DH+IIGK+++VSFK ++ Sbjct: 193 KLTQILLEGSRLLGIPLRDHLIIGKNSYVSFKDQNLL 229 >gi|145631180|ref|ZP_01786954.1| putative DNA repair radC-like protein [Haemophilus influenzae R3021] gi|144983278|gb|EDJ90769.1| putative DNA repair radC-like protein [Haemophilus influenzae R3021] Length = 156 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ + LI EV +G++ + V IREI+++ L+L+A++II+ HNHP+GN PSDAD Sbjct: 60 LFLDRIHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I + DH I+ A F +I Sbjct: 120 YITKRLKEACELMEIKLLDHFIVSGSASFCFTDNHLI 156 >gi|222152997|ref|YP_002562174.1| DNA repair protein RadC [Streptococcus uberis 0140J] gi|254789663|sp|B9DS19|Y843_STRU0 RecName: Full=UPF0758 protein SUB0843 gi|222113810|emb|CAR41883.1| DNA repair protein RadC [Streptococcus uberis 0140J] Length = 226 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I ++ G++ REI+ ATS+I+VHNHPSG NPS+ D+ Sbjct: 129 IYLDTQNRIIEEKTIFIGSVRRSIAEPREILHFACRNMATSLIVVHNHPSGLTNPSENDV 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + + L I DHII+GK + SF+ Sbjct: 189 AFTKKIKRSCDHLGINCLDHIIVGKKQYYSFREK 222 >gi|294012255|ref|YP_003545715.1| DNA repair protein RadC [Sphingobium japonicum UT26S] gi|292675585|dbj|BAI97103.1| DNA repair protein RadC [Sphingobium japonicum UT26S] Length = 231 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N+LI DE G+ID +Y RE+++R ++L + ++ILVHNHPSG+P PS DI Sbjct: 135 LHLNSRNMLIRDEHMGDGSIDQAAIYAREVIRRAIDLGSAALILVHNHPSGSPEPSRQDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I LNI VHDHIIIG S + +I Sbjct: 195 EITRQIAEAGKRLNIAVHDHIIIGTQGHSSLRAKGLI 231 >gi|253577906|ref|ZP_04855178.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850224|gb|EES78182.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 239 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 49/93 (52%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D + D++ +RGT V REI L A S+IL+HNHPSG+P PS D+ +T Sbjct: 141 DVKGHFLGDKILTRGTATGSLVTPREIFMEALRRHAVSLILIHNHPSGDPTPSPDDLQIT 200 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 I L I + DHI+IG + SF+ + Sbjct: 201 ARIYQAGELLGIHLLDHIVIGDQRYCSFREEGL 233 >gi|329121132|ref|ZP_08249763.1| DNA repair protein RadC [Dialister micraerophilus DSM 19965] gi|327471294|gb|EGF16748.1| DNA repair protein RadC [Dialister micraerophilus DSM 19965] Length = 246 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 53/96 (55%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +L+ N L+ +RG + V I+E ++ L A +IILVHNHPSG P+PS DI Sbjct: 151 YLNIKNKLLGYREITRGGLQETVVDIKEALKWALRFKAYAIILVHNHPSGVPDPSREDIR 210 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L+I+V DHIIIG F S + + Sbjct: 211 TTERFVKAGKILDIVVLDHIIIGDGNFKSLAEMGYV 246 >gi|254423586|ref|ZP_05037304.1| DNA repair protein RadC [Synechococcus sp. PCC 7335] gi|196191075|gb|EDX86039.1| DNA repair protein RadC [Synechococcus sp. PCC 7335] Length = 260 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +I +V S GT + R+I + ++ AT II+ HNHPSGN PS DI Sbjct: 158 LLLDVKHRIIGSKVISVGTATETIAHPRDIFREVIKRGATRIIVAHNHPSGNLEPSSEDI 217 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ ++ L I + DH+I+G + S + Sbjct: 218 VLTRQLLDGAKLLGIPLLDHLILGNGDWSSIRQN 251 >gi|224369167|ref|YP_002603331.1| RadC2 [Desulfobacterium autotrophicum HRM2] gi|223691884|gb|ACN15167.1| RadC2 [Desulfobacterium autotrophicum HRM2] Length = 187 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I + S G++ V+ RE+++ + +++++IL HNHPSG PS DI Sbjct: 81 LMLNAKNKIIGLNIVSTGSLSSATVHPREVLKPAILANSSAMILCHNHPSGTLTPSPEDI 140 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG--KDAFVSFKGLRII 97 +T+ II + + I VH+H+II D+F SF +I Sbjct: 141 AITKRIIQASDIMGITVHEHLIINMDDDSFYSFSENGLI 179 >gi|312890208|ref|ZP_07749749.1| DNA repair protein RadC [Mucilaginibacter paludis DSM 18603] gi|311297320|gb|EFQ74448.1| DNA repair protein RadC [Mucilaginibacter paludis DSM 18603] Length = 156 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD +N +I S G R I L+ +A IIL HNHPSG+ PS D Sbjct: 60 LLLDTNNNVIGIFEVSSGGTSTTTADPRLIFAAALKANAKGIILAHNHPSGDWMPSHNDK 119 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ ++ L I V DH+I+ ++ + SF ++ Sbjct: 120 AMTRLLVEAGALLMIPVLDHVIVTREGYYSFANEGLL 156 >gi|298368845|ref|ZP_06980163.1| DNA repair protein RadC [Neisseria sp. oral taxon 014 str. F0314] gi|298282848|gb|EFI24335.1| DNA repair protein RadC [Neisseria sp. oral taxon 014 str. F0314] Length = 225 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ VYIREIV+ L+ A S+I+ HNHP G+ PS+ADI Sbjct: 128 LLLNRQNQLIAMRELSRGTVAENTVYIREIVKLALDEYADSLIIAHNHPGGSARPSEADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L+ +++ + DH I+ S + + Sbjct: 188 GFTKRLAQALDLVDVSLLDHFIVTAKEVCSLRETGYM 224 >gi|312867735|ref|ZP_07727941.1| DNA repair protein RadC [Streptococcus parasanguinis F0405] gi|311096798|gb|EFQ55036.1| DNA repair protein RadC [Streptococcus parasanguinis F0405] Length = 227 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I ++ GT++ REI+ L+ ATSIIL HNHPSG PS D Sbjct: 129 LYLNTQNEIIHQQIIFIGTVNRSIAEPREILHYALKHMATSIILAHNHPSGAVFPSKNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T ++ + + + DH+I+ ++ + S++ Sbjct: 189 EVTHRVLEACEVMGLTLLDHLIVSEENYYSYREE 222 >gi|213963331|ref|ZP_03391587.1| DNA repair protein RadC [Capnocytophaga sputigena Capno] gi|213953999|gb|EEB65325.1| DNA repair protein RadC [Capnocytophaga sputigena Capno] Length = 221 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/90 (38%), Positives = 52/90 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I S G I H V IR + + LE A S+ILVHNHPSG+ PS D+ Sbjct: 129 LYLNSANRVIHKCRLSSGGITHTTVDIRLLFKNALEQGAVSLILVHNHPSGSTTPSKEDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90 +T+ + + L+I + DHII+ + + S Sbjct: 189 ELTERVRNAGDTLDIKLLDHIIVTEKEYYS 218 >gi|206975625|ref|ZP_03236537.1| RadC [Bacillus cereus H3081.97] gi|206746087|gb|EDZ57482.1| RadC [Bacillus cereus H3081.97] Length = 168 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N V G+++ V+ RE+++ + +A SII+ HNHPS +P PS D+ Sbjct: 72 LCLDIKNQPTTINVCHIGSLNSSIVHPREVLKPAIISNAASIIVAHNHPSNDPTPSSEDL 131 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ +I + I V DH+I+ +++FVS K + Sbjct: 132 EVTKRLIEAGKVVGIEVLDHLIVCEESFVSLKEKGYM 168 >gi|168334673|ref|ZP_02692813.1| DNA repair protein RadC [Epulopiscium sp. 'N.t. morphotype B'] Length = 225 Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD LI S GT++ V+ R++ + +E+ A S+I+VHNHPSG+P PS DI Sbjct: 122 LYLDSKLGLIKKHCISIGTLNMTIVHARDVFRPAIEVCANSLIVVHNHPSGDPEPSKQDI 181 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ + I + DH+I+G F S + + I+ Sbjct: 182 TITRDLQFVGEVIKIPLLDHVIVGDGDFRSLRQMGIL 218 >gi|307611348|emb|CBX01009.1| DNA repair protein RadC [Legionella pneumophila 130b] Length = 227 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA E GTI+ VY R IV+R L+L+A ++IL HNHPSG + S D+ Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVS-FKGLRII 97 +T+ I L+ ++ + DHI+IG + S F + + Sbjct: 188 AITKRIRDALDLVDARLLDHIVIGDNEVYSIFAENKWV 225 >gi|302391343|ref|YP_003827163.1| DNA replication and repair protein RadC [Acetohalobium arabaticum DSM 5501] gi|302203420|gb|ADL12098.1| DNA replication and repair protein RadC [Acetohalobium arabaticum DSM 5501] Length = 229 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 56/96 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I+ E S G++ + V+ RE+ + + S+ ++IL HNHPSGNP PS DI Sbjct: 132 LLLNTKNEIISIEDISIGSLSNSIVHPREVFKPAIRRSSAAVILAHNHPSGNPEPSKEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++TQ I L I V DH++IG ++S K Sbjct: 192 DITQRIKKAGKILGIEVLDHLVIGNKDYISLKEKGY 227 >gi|330895709|gb|EGH27999.1| hypothetical protein PSYJA_02849 [Pseudomonas syringae pv. japonica str. M301072PT] Length = 111 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 34/87 (39%), Positives = 56/87 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ E+ RGTI+ V+ R++V+R + +A S+IL HNHPSG PS +DI Sbjct: 8 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 67 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDA 87 ++T+ + L +++ V DH+I+G Sbjct: 68 DLTKRLKEALMLVDVHVLDHVIVGDGG 94 >gi|330684041|gb|EGG95798.1| DNA repair protein RadC [Staphylococcus epidermidis VCU121] Length = 227 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 52/96 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+I + GT++ ++ REI ++ S S+I+VHNHPSG+ PS+ DI Sbjct: 128 LLLNSKNIVIKQKCIFVGTLNSSIIHPREIFNVAIKESCNSMIVVHNHPSGDVTPSEEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 N T + L I V DHIIIG + F S Sbjct: 188 NTTIRLRDCGMILGINVLDHIIIGDNQFTSLVECGY 223 >gi|42520150|ref|NP_966065.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of Drosophila melanogaster] gi|42409887|gb|AAS13999.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of Drosophila melanogaster] Length = 99 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++ D+ L E GT+D VP YIRE+ ++ L ATSII+ HNHP G PSD D Sbjct: 4 IYFDQKCRLKG-EEVFTGTVDKVPFYIREVTRKALIRKATSIIISHNHPEGRLKPSDEDE 62 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ + I + DHIII + SFK ++ Sbjct: 63 AVTKDLAKACQTIGIRLLDHIIITSVGYFSFKEQGLL 99 >gi|314937357|ref|ZP_07844695.1| DNA repair protein RadC family protein [Enterococcus faecium TX0133a04] gi|314942737|ref|ZP_07849561.1| DNA repair protein RadC family protein [Enterococcus faecium TX0133C] gi|314952586|ref|ZP_07855581.1| DNA repair protein RadC family protein [Enterococcus faecium TX0133A] gi|314992398|ref|ZP_07857825.1| DNA repair protein RadC family protein [Enterococcus faecium TX0133B] gi|314997273|ref|ZP_07862247.1| DNA repair protein RadC family protein [Enterococcus faecium TX0133a01] gi|313588636|gb|EFR67481.1| DNA repair protein RadC family protein [Enterococcus faecium TX0133a01] gi|313593066|gb|EFR71911.1| DNA repair protein RadC family protein [Enterococcus faecium TX0133B] gi|313595310|gb|EFR74155.1| DNA repair protein RadC family protein [Enterococcus faecium TX0133A] gi|313598517|gb|EFR77362.1| DNA repair protein RadC family protein [Enterococcus faecium TX0133C] gi|313643261|gb|EFS07841.1| DNA repair protein RadC family protein [Enterococcus faecium TX0133a04] Length = 255 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 2/97 (2%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +IA +G I+ REI Q L ++ I + HNHPSG PS+ D Sbjct: 157 MCLNTKNEVIAYSEVFKGGINQSVAIPREIFQLALLNNSAKIAVSHNHPSGYEFPSENDK 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG--KDAFVSFKGLR 95 + T N+ + I + DHII+ ++ SF+ Sbjct: 217 SFTTNLKNAGKTIGIELLDHIIVTSKNTSYYSFQENG 253 >gi|91202086|emb|CAJ75146.1| similar to DNA repair protein RadC [Candidatus Kuenenia stuttgartiensis] Length = 137 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 36/95 (37%), Positives = 57/95 (60%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N++ E+ S GT+ + RE+ + + + +I+LVHNHP+G+P PS D+++ Sbjct: 42 LNNKNVIQYIELVSLGTLTSAVLGPREVFRLAVHKAIANILLVHNHPAGDPEPSKEDVSV 101 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 TQ +I+ L I V DH+IIG + SFK II Sbjct: 102 TQRLISAGQILGIQVLDHVIIGNPEYYSFKERGII 136 >gi|313889050|ref|ZP_07822708.1| DNA repair protein RadC family protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312844923|gb|EFR32326.1| DNA repair protein RadC family protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 148 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 57/95 (60%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD +I V S+GTI+ PV RE+ Q+ +A SII+ HNHPSG+P PS DI Sbjct: 54 LDVKKKVIGTFVISQGTINMTPVSPREVFQKAFLANAHSIIVAHNHPSGDPEPSKQDIAF 113 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T++++ ++I + D II+G +++ SF +I Sbjct: 114 TRDLMEAGKIMDIQICDSIILGHNSYYSFLEDGLI 148 >gi|301155839|emb|CBW15307.1| unnamed protein product [Haemophilus parainfluenzae T3T1] Length = 156 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD+ + LI EV +G++ + V IREI+++ L+L+A++II+ HNHP+GN PSDAD Sbjct: 60 LFLDRIHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I + DH I+ A F ++ Sbjct: 120 YITKRLKEACELMEIKLLDHFIVSGSASFCFTDNHLM 156 >gi|149277410|ref|ZP_01883551.1| putative DNA repair protein [Pedobacter sp. BAL39] gi|149231643|gb|EDM37021.1| putative DNA repair protein [Pedobacter sp. BAL39] Length = 190 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N +I + S G + + + + L+ T IIL HNHPSG PS+AD+ Sbjct: 93 LLLNRSNRVIGIKEVSSGGMTGTVIDPKLVFSVALKSLCTGIILCHNHPSGRLKPSEADL 152 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKD-AFVSFKGLRII 97 +T+ ++ L++ + DHII+ K F SF II Sbjct: 153 MLTRRLVEVGKLLDLQLLDHIILTKHCGFYSFADEGII 190 >gi|254498591|ref|ZP_05111311.1| DNA repair protein RadC [Legionella drancourtii LLAP12] gi|254352182|gb|EET10997.1| DNA repair protein RadC [Legionella drancourtii LLAP12] Length = 227 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 55/90 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA E GTI+ ++ R I++R L+L+A ++IL HNHPSG + S DI Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATIHPRPIIERVLQLNAAALILAHNHPSGISDASHQDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90 +T+ I L ++ + DHI+IG + S Sbjct: 188 MVTERIRDALELVDARLLDHIVIGDNEVYS 217 >gi|254444140|ref|ZP_05057616.1| DNA repair protein RadC [Verrucomicrobiae bacterium DG1235] gi|198258448|gb|EDY82756.1| DNA repair protein RadC [Verrucomicrobiae bacterium DG1235] Length = 239 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 7/102 (6%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L++ N LI + GT + V+ RE+ + + A+++I VHNHPSG+P PS ADI + Sbjct: 138 LNRKNRLIKKVEITSGTASNSLVHPREVYRDAIRQGASAVICVHNHPSGDPAPSAADIKV 197 Query: 63 TQNIITTLNPLNIIVHDHIIIG-------KDAFVSFKGLRII 97 T+ + + L I + DHI++G + SF+ ++ Sbjct: 198 TRQLRESSKVLGIDLLDHIVVGSVEHDPRSRGYYSFQESGLL 239 >gi|29349103|ref|NP_812606.1| putative DNA repair protein [Bacteroides thetaiotaomicron VPI-5482] gi|253571267|ref|ZP_04848674.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29341010|gb|AAO78800.1| putative DNA repair protein [Bacteroides thetaiotaomicron VPI-5482] gi|251839220|gb|EES67304.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 231 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ LI S G ID +R I++ L AT I +VHNHPSGN PS D Sbjct: 135 LLLNQATRLIDKVRISTGGIDGTYTDVRTILREALLQRATQIAVVHNHPSGNIQPSQPDR 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++I + +NI + DH+I+ +D F SF ++ Sbjct: 195 TLTEHIRRAADTMNIRLIDHVIVCEDKFYSFADEGLL 231 >gi|58617393|ref|YP_196592.1| DNA repair protein radC-like protein [Ehrlichia ruminantium str. Gardel] gi|58417005|emb|CAI28118.1| DNA repair protein radC homolog [Ehrlichia ruminantium str. Gardel] Length = 230 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 63/97 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ L+ADE+Q GT++ P+YIRE++++ L L ATSII+ HNHPSG+ PS ADI Sbjct: 134 LYLNTKFKLLADEIQDVGTVNQTPLYIREVIKKSLLLGATSIIIAHNHPSGDATPSKADI 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + N + I + DH+I+ + SFK ++ Sbjct: 194 EVTNQLAIACNNMGITLIDHVIVTSNTHYSFKSHDLL 230 >gi|77405495|ref|ZP_00782587.1| DNA repair protein RadC [Streptococcus agalactiae H36B] gi|77175892|gb|EAO78669.1| DNA repair protein RadC [Streptococcus agalactiae H36B] Length = 141 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 58/94 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +++D N +I GT+ REI+ + ATS+I++HNHPSG+PNPS++D+ Sbjct: 44 IYMDTQNRIIEQRTIFIGTVRRSVAEPREILHYACKNMATSLIIIHNHPSGSPNPSESDL 103 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 + T+ I + + L I+ DHII+GK+ + SF+ Sbjct: 104 SFTKKIKRSCDHLGIVCLDHIIVGKNKYYSFREE 137 >gi|306831281|ref|ZP_07464441.1| DNA repair protein RadC [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426517|gb|EFM29629.1| DNA repair protein RadC [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 232 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I G++ REI+ + ATS+I+VHNHPSG+P PS+ D+ Sbjct: 135 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 TQ + + + II DHI+IGK + SF+ Sbjct: 195 QFTQKMKRSCEDIGIICLDHIVIGKYQYYSFREE 228 >gi|224369042|ref|YP_002603206.1| RadC1 [Desulfobacterium autotrophicum HRM2] gi|223691759|gb|ACN15042.1| RadC1 [Desulfobacterium autotrophicum HRM2] Length = 187 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 2/99 (2%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N +I + S G++ V+ RE+++ + +++++IL HNHPSG PS DI Sbjct: 81 LMLNAKNKIIGLNIVSTGSLSSATVHPREVLKPAILANSSAMILCHNHPSGTLTPSPEDI 140 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG--KDAFVSFKGLRII 97 +T+ II N + I VH+H+II D+F SF +I Sbjct: 141 AITERIIKASNIMGITVHEHLIISMDDDSFYSFSEHGLI 179 >gi|306833394|ref|ZP_07466521.1| DNA repair protein RadC [Streptococcus bovis ATCC 700338] gi|304424164|gb|EFM27303.1| DNA repair protein RadC [Streptococcus bovis ATCC 700338] Length = 232 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I G++ REI+ + ATS+I+VHNHPSG+P PS+ D+ Sbjct: 135 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 TQ I + + II DH++IGK + SF+ Sbjct: 195 RFTQKIKRSCEDIGIICLDHLVIGKYQYYSFREE 228 >gi|22537259|ref|NP_688110.1| DNA repair protein RadC [Streptococcus agalactiae 2603V/R] gi|76788041|ref|YP_329807.1| DNA repair protein RadC [Streptococcus agalactiae A909] gi|77413024|ref|ZP_00789226.1| DNA repair protein RadC [Streptococcus agalactiae 515] gi|39931963|sp|Q8DZK0|Y1101_STRA5 RecName: Full=UPF0758 protein SAG1101 gi|123601762|sp|Q3K0Z6|Y1186_STRA1 RecName: Full=UPF0758 protein SAK_1186 gi|22534127|gb|AAM99982.1|AE014242_11 DNA repair protein RadC [Streptococcus agalactiae 2603V/R] gi|76563098|gb|ABA45682.1| DNA repair protein RadC [Streptococcus agalactiae A909] gi|77160922|gb|EAO72031.1| DNA repair protein RadC [Streptococcus agalactiae 515] gi|319745114|gb|EFV97439.1| DNA repair protein RadC [Streptococcus agalactiae ATCC 13813] Length = 226 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 57/94 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +++D N +I GT+ REI+ + ATS+I++HNHPSG+P PS++D+ Sbjct: 129 IYMDTQNRIIEQRTIFIGTVRRSVAEPREILHYACKNMATSLIIIHNHPSGSPKPSESDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 + T+ I + + L I+ DHII+GK+ + SF+ Sbjct: 189 SFTKKIKRSCDHLGIVCLDHIIVGKNKYYSFREE 222 >gi|15675098|ref|NP_269272.1| DNA repair protein RadC [Streptococcus pyogenes M1 GAS] gi|19746067|ref|NP_607203.1| DNA repair protein RadC [Streptococcus pyogenes MGAS8232] gi|56808362|ref|ZP_00366118.1| COG2003: DNA repair proteins [Streptococcus pyogenes M49 591] gi|71910653|ref|YP_282203.1| DNA repair protein RadC [Streptococcus pyogenes MGAS5005] gi|94988589|ref|YP_596690.1| DNA repair protein RadC [Streptococcus pyogenes MGAS9429] gi|94990465|ref|YP_598565.1| DNA repair protein RadC [Streptococcus pyogenes MGAS10270] gi|94992412|ref|YP_600511.1| DNA repair protein RadC [Streptococcus pyogenes MGAS2096] gi|94994387|ref|YP_602485.1| DNA repair protein RadC [Streptococcus pyogenes MGAS10750] gi|139473789|ref|YP_001128505.1| DNA repair protein RadC [Streptococcus pyogenes str. Manfredo] gi|209559401|ref|YP_002285873.1| DNA repair protein RadC [Streptococcus pyogenes NZ131] gi|306827376|ref|ZP_07460663.1| DNA repair protein RadC [Streptococcus pyogenes ATCC 10782] gi|54039004|sp|P65963|Y1079_STRP8 RecName: Full=UPF0758 protein spyM18_1079 gi|54041785|sp|P65962|Y1118_STRP1 RecName: Full=UPF0758 protein SPy_1118/M5005_Spy0840 gi|229485566|sp|Q1JBU1|Y915_STRPB RecName: Full=UPF0758 protein MGAS2096_Spy0915 gi|229485567|sp|Q1JLS3|Y959_STRPC RecName: Full=UPF0758 protein MGAS9429_Spy0959 gi|229485568|sp|Q1JGX3|Y956_STRPD RecName: Full=UPF0758 protein MGAS10270_Spy0956 gi|229485569|sp|Q1J6P2|Y991_STRPF RecName: Full=UPF0758 protein MGAS10750_Spy0991 gi|229485570|sp|A2REK0|Y948_STRPG RecName: Full=UPF0758 protein SpyM50948 gi|238054491|sp|B5XLG6|Y870_STRPZ RecName: Full=UPF0758 protein Spy49_0870 gi|13622255|gb|AAK33993.1| putative DNA repair protein [Streptococcus pyogenes M1 GAS] gi|19748237|gb|AAL97702.1| putative DNA repair protein [Streptococcus pyogenes MGAS8232] gi|71853435|gb|AAZ51458.1| DNA repair protein [Streptococcus pyogenes MGAS5005] gi|94542097|gb|ABF32146.1| DNA repair protein [Streptococcus pyogenes MGAS9429] gi|94543973|gb|ABF34021.1| DNA repair protein radC [Streptococcus pyogenes MGAS10270] gi|94545920|gb|ABF35967.1| DNA repair protein radC [Streptococcus pyogenes MGAS2096] gi|94547895|gb|ABF37941.1| DNA repair protein radC [Streptococcus pyogenes MGAS10750] gi|134272036|emb|CAM30275.1| DNA repair protein RadC [Streptococcus pyogenes str. Manfredo] gi|209540602|gb|ACI61178.1| RadC-like DNA repair protein [Streptococcus pyogenes NZ131] gi|304430523|gb|EFM33545.1| DNA repair protein RadC [Streptococcus pyogenes ATCC 10782] Length = 226 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 50/94 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N +I ++ GT+ REI+ + ATS+I++HNHPSGN PS D Sbjct: 129 LYLDNQNRIIEEKTIFIGTVRRSLAEPREILYYACKNMATSLIVIHNHPSGNIEPSSNDY 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + L II DHII+ + SF+ Sbjct: 189 CFTEKIKRSCEDLGIICLDHIIVSYKDYYSFREK 222 >gi|300778380|ref|ZP_07088238.1| DNA repair protein RadC [Chryseobacterium gleum ATCC 35910] gi|300503890|gb|EFK35030.1| DNA repair protein RadC [Chryseobacterium gleum ATCC 35910] Length = 225 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ +N +I ++G I V +R + + L+ +T II+ HNHPSG+ PS DI Sbjct: 129 IFLNNNNKVIHISQLTQGGISQSIVDVRTLYKGALDHFSTGIIIAHNHPSGSLKPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+TQ I N L+I + DHII+ ++++ SF ++ Sbjct: 189 NITQKIKEAGNTLSIQLLDHIIVTQESYFSFSDSGLL 225 >gi|54295324|ref|YP_127739.1| DNA repair protein RadC [Legionella pneumophila str. Lens] gi|81368019|sp|Q5WTW4|Y2409_LEGPL RecName: Full=UPF0758 protein lpl2409 gi|53755156|emb|CAH16649.1| DNA repair protein RadC [Legionella pneumophila str. Lens] Length = 227 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA E GTI+ VY R IV+R L+L+A ++IL HNHPSG + S D+ Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVS-FKGLRI 96 +T+ I L+ ++ + DHI+IG + S F + Sbjct: 188 AITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKW 224 >gi|299822789|ref|ZP_07054675.1| DNA repair protein RadC [Listeria grayi DSM 20601] gi|299816318|gb|EFI83556.1| DNA repair protein RadC [Listeria grayi DSM 20601] Length = 226 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N ++ + G+++ V+ RE+ + SA I+ HNHPSG+P PS DI Sbjct: 130 VLLNTRNQIVHRQTIFIGSLNASIVHPREVYGLAVRKSAAQIMCFHNHPSGDPTPSPEDI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+N+ + + I + DHIIIGK +F S K Sbjct: 190 QVTKNLAKAGDIIGIPLIDHIIIGKGSFTSLKEQGY 225 >gi|148548137|ref|YP_001268239.1| DNA repair protein RadC [Pseudomonas putida F1] gi|148512195|gb|ABQ79055.1| DNA repair protein RadC [Pseudomonas putida F1] Length = 164 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + +++ ++ G+ID VY R++V + LE +A ++I HNHPSG PS AD Sbjct: 68 LCLDSRHRVLSFDILFTGSIDGASVYPRQVVIKALEHNAAAVIFSHNHPSGCSEPSGADR 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L + + V DHII+G+ +S I Sbjct: 128 VLTNRLTEALALVEVCVLDHIIVGEGTPLSLAEYGWI 164 >gi|253571565|ref|ZP_04848971.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838773|gb|EES66858.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 150 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ N + + S+G + + ++ I+Q L++ A+ IIL HNHPSGN PS+ D Sbjct: 54 MFLNRANKALGVSLISKGGMAETVMDVKIILQTALKVHASGIILSHNHPSGNLRPSEPDK 113 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L++ + DHII+ ++++ SF +I Sbjct: 114 QITSKIKEACKVLDLHLLDHIILTEESYYSFADEGLI 150 >gi|323351534|ref|ZP_08087188.1| DNA repair protein RadC [Streptococcus sanguinis VMC66] gi|322122020|gb|EFX93746.1| DNA repair protein RadC [Streptococcus sanguinis VMC66] Length = 227 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N ++ + GT+ REI+ L+ ATSIILVHNHPSG+ PS D Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +TQ++ + +++ DH+I+ K + S++ Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKCNYYSYREE 223 >gi|320355157|ref|YP_004196496.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032] gi|320123659|gb|ADW19205.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032] Length = 159 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 1/95 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A RG+I+ V+ RE+V+ L L+A S+I+ HNHPSG PS D+ Sbjct: 62 LFLDSRHQVLAWREMFRGSINRNSVHPREVVKEALTLNAASVIIAHNHPSGGIQPSKEDL 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + L +++ V DH+I+G + +S Sbjct: 122 ELTRTLTEILKVIDVRVLDHLIVG-EEVLSLSETG 155 >gi|312129966|ref|YP_003997306.1| DNA replication and repair protein radc [Leadbetterella byssophila DSM 17132] gi|311906512|gb|ADQ16953.1| DNA replication and repair protein RadC [Leadbetterella byssophila DSM 17132] Length = 225 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ ++ S+G ++ V IR + + LE +TSI+L HNHPSG +PS DI Sbjct: 129 LCLNRQLQILQTIQISKGGLNATMVDIRLLFKAALENFSTSILLCHNHPSGQLHPSKQDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I + L+I V DH+I + + SF ++ Sbjct: 189 QLTQKIKSAAVYLDIEVADHLIFTDNGYYSFVENGLL 225 >gi|281491501|ref|YP_003353481.1| DNA repair protein RadC [Lactococcus lactis subsp. lactis KF147] gi|281375219|gb|ADA64732.1| DNA repair protein RadC [Lactococcus lactis subsp. lactis KF147] Length = 226 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 46/93 (49%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD N +I + G ++ REI+ ++ + +++ HNHPSGN PS AD Sbjct: 130 YLDGQNRIIGKKTIFIGAVNQATASPREILYHAIKNLSVGLLVAHNHPSGNLRPSQADKI 189 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T I + + I DHII+G + SF+ Sbjct: 190 FTDKIKKSCEDVGINFIDHIIVGAGNYFSFREE 222 >gi|52842697|ref|YP_096496.1| DNA repair protein RadC [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81376830|sp|Q5ZSM8|Y2489_LEGPH RecName: Full=UPF0758 protein lpg2489 gi|52629808|gb|AAU28549.1| DNA repair protein RadC [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 227 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA E GTI+ VY R IV+R L+L+A ++IL HNHPSG + S D+ Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVS-FKGLRII 97 +T+ I L+ ++ + DHI+IG + S F + + Sbjct: 188 AITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKWV 225 >gi|325971670|ref|YP_004247861.1| DNA repair protein RadC [Spirochaeta sp. Buddy] gi|324026908|gb|ADY13667.1| DNA repair protein RadC [Spirochaeta sp. Buddy] Length = 156 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 52/94 (55%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + +I V S+G ++ V+ RE+ + + ++T+I++ HNHPSGN PS D ++ Sbjct: 62 LNGAHQIIDAHVISKGLVNRTLVHPREVFRPAILDNSTAIVIAHNHPSGNLEPSAEDKDV 121 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T I + + I V DH+I ++ + S + Sbjct: 122 TFRIRQAGDLIGIRVLDHLIFSQNGYFSMLESGM 155 >gi|153808951|ref|ZP_01961619.1| hypothetical protein BACCAC_03252 [Bacteroides caccae ATCC 43185] gi|149128284|gb|EDM19503.1| hypothetical protein BACCAC_03252 [Bacteroides caccae ATCC 43185] Length = 231 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ LI S G ID +R I++ L AT I +VHNHPSGN PS D Sbjct: 135 LLLNQATKLIDKIRISSGGIDGTYADVRSILREALMQRATQIAVVHNHPSGNIQPSQPDR 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++I + +NI + DH+I+ +D F SF ++ Sbjct: 195 TLTEHIRKAADTMNIRLIDHVIVCEDGFYSFADEGLL 231 >gi|270290994|ref|ZP_06197217.1| DNA repair protein [Pediococcus acidilactici 7_4] gi|270280390|gb|EFA26225.1| DNA repair protein [Pediococcus acidilactici 7_4] Length = 225 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N + + V +G ++ V+ REI+ L S+ ILVHNHPSGN PS D+ Sbjct: 126 LCLDTKNQIKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVEPSMNDV 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + + I + DH+I+G + S R++ Sbjct: 186 AFTKKMKKIGDLMGIRLIDHLIVGDQTYWSAAENRVL 222 >gi|315222705|ref|ZP_07864594.1| DNA repair protein RadC [Streptococcus anginosus F0211] gi|319938952|ref|ZP_08013316.1| hypothetical protein HMPREF9459_00303 [Streptococcus anginosus 1_2_62CV] gi|315188391|gb|EFU22117.1| DNA repair protein RadC [Streptococcus anginosus F0211] gi|319812002|gb|EFW08268.1| hypothetical protein HMPREF9459_00303 [Streptococcus anginosus 1_2_62CV] Length = 226 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G++ REI+ ++ ATSIILVHNHPSG PS D Sbjct: 129 LYLNTQNKIIHQQTIFIGSVSRSIAEPREILHYAVKHMATSIILVHNHPSGAVLPSKNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+++ + I+ DH+I+ + + S++ Sbjct: 189 EVTKHVKEACELMGFILLDHLIVAEKDYYSYREE 222 >gi|258590906|emb|CBE67201.1| DNA repair protein radC homolog [NC10 bacterium 'Dutch sediment'] Length = 236 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 57/96 (59%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 F++ N + A E RGT+D VY+R++++R L A+ +L HNHPSG+P PS D Sbjct: 141 FVNSKNAVTATECLQRGTVDQSVVYVRKVIERALVHKASGFLLAHNHPSGDPTPSPQDRE 200 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + T + + DH++IG A SFK + ++ Sbjct: 201 ITQALKTAAATVGVRFLDHLVIGDGAPFSFKAVGLL 236 >gi|304385266|ref|ZP_07367611.1| DNA repair protein RadC [Pediococcus acidilactici DSM 20284] gi|304328473|gb|EFL95694.1| DNA repair protein RadC [Pediococcus acidilactici DSM 20284] Length = 222 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N + + V +G ++ V+ REI+ L S+ ILVHNHPSGN PS D+ Sbjct: 123 LCLDTKNQIKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVEPSMNDV 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + + I + DH+I+G + S R++ Sbjct: 183 AFTKKMKKIGDLMGIRLIDHLIVGDQTYWSAAENRVL 219 >gi|150025420|ref|YP_001296246.1| DNA repair protein RadC [Flavobacterium psychrophilum JIP02/86] gi|149771961|emb|CAL43435.1| DNA repair protein RadC [Flavobacterium psychrophilum JIP02/86] Length = 231 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 56/96 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N +I S+G I V +R + + LE +ATSIIL HNHPSG SDAD Sbjct: 135 LFLNNANKVIYKSQISKGGITGTVVDVRVVFKMALEQNATSIILTHNHPSGKLEASDADK 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 N+T+ + L+I + DHIII + ++SF+ I Sbjct: 195 NITKQLKLAGQQLSIPILDHIIITEKGYLSFQDENI 230 >gi|188994910|ref|YP_001929162.1| putative DNA repair protein [Porphyromonas gingivalis ATCC 33277] gi|188594590|dbj|BAG33565.1| putative DNA repair protein [Porphyromonas gingivalis ATCC 33277] Length = 230 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ +I+ E SRG + +R I+ + + A++IIL HNHPSG PS+ DI Sbjct: 133 LLLNQSGKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGTVRPSEQDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRII 97 +TQ + L ++DH+IIG D + SF ++ Sbjct: 193 QLTQRVQKAATLLGFRLNDHLIIGDDGVYFSFADEGLL 230 >gi|320546653|ref|ZP_08040965.1| DNA repair protein RadC [Streptococcus equinus ATCC 9812] gi|320448708|gb|EFW89439.1| DNA repair protein RadC [Streptococcus equinus ATCC 9812] Length = 226 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I G++ REI+ + ATS+I+VHNHPSG+P PS+ D+ Sbjct: 129 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + + +I DHII+GK + SF+ Sbjct: 189 RFTEKIKRSCEDIGLICLDHIIVGKYQYYSFREE 222 >gi|313887968|ref|ZP_07821646.1| DNA repair protein RadC [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845923|gb|EFR33306.1| DNA repair protein RadC [Peptoniphilus harei ACS-146-V-Sch2b] Length = 239 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 57/95 (60%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + S+GTI+ V+ RE+ + + +A SIIL+HNHP+G+P+PS DI + Sbjct: 145 LNTKKEINFIREISKGTINMTIVHSREVFRAAISDNAHSIILLHNHPTGDPSPSKEDIKL 204 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+N++ + I + DHIIIG + + SF ++ Sbjct: 205 TKNLLEASKIIGIDILDHIIIGDNKYFSFLEEGLL 239 >gi|304407257|ref|ZP_07388910.1| DNA repair protein RadC [Paenibacillus curdlanolyticus YK9] gi|304343698|gb|EFM09539.1| DNA repair protein RadC [Paenibacillus curdlanolyticus YK9] Length = 165 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N A S GT++ V+ RE + + +A SII HNHPSG P+PS DI Sbjct: 68 LCLNTKNEPTALHTVSIGTLNASLVHPRETFKLAILANAASIIACHNHPSGQPDPSSEDI 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKD-AFVSFKGLRII 97 +T+ + + L I + DH+++G VS K ++ Sbjct: 128 AITERLRDSGTLLGIELLDHLVLGDGITLVSMKERGLM 165 >gi|302346939|ref|YP_003815237.1| DNA repair protein RadC domain protein [Prevotella melaninogenica ATCC 25845] gi|302151141|gb|ADK97402.1| DNA repair protein RadC domain protein [Prevotella melaninogenica ATCC 25845] Length = 149 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ N +IA S G + V +R I+Q L +AT II HNHP+GN PS D Sbjct: 52 LYLNQANEVIAYNTISEGGLTETAVDVRIILQGALLTNATQIIFAHNHPTGNLKPSPQDD 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I DHII+ D++ S++ I Sbjct: 112 MLTRELQKACQIMRIRFTDHIIMSVDSYYSYREEGRI 148 >gi|296876566|ref|ZP_06900617.1| DNA repair protein RadC [Streptococcus parasanguinis ATCC 15912] gi|296432559|gb|EFH18355.1| DNA repair protein RadC [Streptococcus parasanguinis ATCC 15912] Length = 227 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ NI+I + GT++ REI+ L+ ATSIIL HNHPSG PS D Sbjct: 129 LYLNTQNIIIHQQTIFIGTVNRSIAEPREILHYALKHMATSIILAHNHPSGAVFPSKNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T ++ + + + DH+I+ ++ + S++ Sbjct: 189 EVTHRVLEACEVMGLTLLDHLIVSEENYYSYREE 222 >gi|54298489|ref|YP_124858.1| DNA repair protein RadC [Legionella pneumophila str. Paris] gi|81369883|sp|Q5X240|Y2553_LEGPA RecName: Full=UPF0758 protein lpp2553 gi|53752274|emb|CAH13706.1| DNA repair protein RadC [Legionella pneumophila str. Paris] Length = 227 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA E GTI+ VY R IV+R L+L+A ++IL HNHPSG + S D+ Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVS-FKGLRII 97 +T+ I L+ ++ + DHI+IG + S F + + Sbjct: 188 AITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKWV 225 >gi|50914184|ref|YP_060156.1| DNA repair protein RadC [Streptococcus pyogenes MGAS10394] gi|73913742|sp|Q5XC90|Y838_STRP6 RecName: Full=UPF0758 protein M6_Spy0838 gi|50903258|gb|AAT86973.1| DNA repair protein radC [Streptococcus pyogenes MGAS10394] Length = 226 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 50/94 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N +I ++ GT+ REI+ + ATS+I++HNHPSGN PS D Sbjct: 129 LYLDNQNRIIEEKTIFIGTVRRSLAEPREILYYACKNMATSLIVIHNHPSGNIEPSSNDY 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + L II DHII+ + SF+ Sbjct: 189 CFTEKIKRSCEDLGIICLDHIIVSYKDYYSFREK 222 >gi|307354756|ref|YP_003895807.1| DNA repair protein RadC [Methanoplanus petrolearius DSM 11571] gi|307157989|gb|ADN37369.1| DNA repair protein RadC [Methanoplanus petrolearius DSM 11571] Length = 219 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 54/95 (56%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ LI + + G ++H PV+ RE+ + A S++ VHNHPSG+P PS D+++ Sbjct: 125 LNGAGELIEQRIVTVGLLNHSPVHPREVFADAITDRAASVLFVHNHPSGSPEPSVQDVDI 184 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L I V DHII K +VSFK ++ Sbjct: 185 TKRLYEAAEILGIGVLDHIITAKRGYVSFKERGLL 219 >gi|213019779|ref|ZP_03335582.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994609|gb|EEB55254.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 221 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++ D+ L E GT+D VP YIRE+ ++ L ATSII+ HNHP G PSD D Sbjct: 126 IYFDQKCHLKG-EEVFTGTVDKVPFYIREVTRKALIRKATSIIISHNHPEGRLKPSDEDE 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ + I + DHIII + SFK ++ Sbjct: 185 AVTKDLAKACQTIGIRLLDHIIITSVGYFSFKEQGLL 221 >gi|34540659|ref|NP_905138.1| DNA repair protein RadC [Porphyromonas gingivalis W83] gi|81417483|sp|Q7MVX9|Y894_PORGI RecName: Full=UPF0758 protein PG_0894 gi|34396973|gb|AAQ66037.1| DNA repair protein RadC [Porphyromonas gingivalis W83] Length = 227 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ +I+ E SRG + +R I+ + + A++IIL HNHPSG PS+ DI Sbjct: 130 LLLNQSGKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGTVRPSEQDI 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRII 97 +TQ + L ++DH+IIG D + SF ++ Sbjct: 190 QLTQRVQKAATLLGFRLNDHLIIGDDGAYFSFADEGLL 227 >gi|241759982|ref|ZP_04758080.1| DNA repair protein RadC [Neisseria flavescens SK114] gi|241319436|gb|EER55866.1| DNA repair protein RadC [Neisseria flavescens SK114] Length = 224 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LIA SRGT+ VYIREIV+ L+ A S+IL HNHP + PS++D+ Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGSSARPSESDV 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L+ ++I + DH I+ S + + Sbjct: 188 QFTERLKQALSLVDITLLDHFIVTAKETCSLREQGYM 224 >gi|320527463|ref|ZP_08028644.1| putative DNA repair protein RadC [Solobacterium moorei F0204] gi|320132176|gb|EFW24725.1| putative DNA repair protein RadC [Solobacterium moorei F0204] Length = 239 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 55/96 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ + +I+ + GTI+ VY REI + L + +T I+L HNHPSG PS D+ Sbjct: 128 VYLNTAHRIISAKTLFVGTINASAVYPREIFKEALLIGSTDILLAHNHPSGVLTPSTQDL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T ++ + + V DH+I+ + +F+SF + Sbjct: 188 VVTGKLMECGKLMGVRVLDHLIVSQTSFLSFAREEL 223 >gi|190570883|ref|YP_001975241.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190571715|ref|YP_001976073.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019311|ref|ZP_03335118.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|213019396|ref|ZP_03335202.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357155|emb|CAQ54567.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357987|emb|CAQ55450.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994818|gb|EEB55460.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995420|gb|EEB56061.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 222 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LDK N LI DEV GTID V + R++V++ L + A SIIL HNHP G+ PS+ D Sbjct: 127 IYLDKQNRLIRDEVYF-GTIDEVHLSERKVVKKALSMEAASIILSHNHPGGSLEPSEDDK 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ +++ + I + DHII+ + SFK ++ Sbjct: 186 VMTRELVSACQGVGIELEDHIIMTDKGYCSFKERELL 222 >gi|288801042|ref|ZP_06406498.1| DNA repair protein RadC [Prevotella sp. oral taxon 299 str. F0039] gi|288331976|gb|EFC70458.1| DNA repair protein RadC [Prevotella sp. oral taxon 299 str. F0039] Length = 229 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ LI S+G I V +R +V+ L +AT ++ HNHPS N PS AD Sbjct: 133 LYLNQGYKLIKAVQLSKGGITETAVDVRLVVKEALLCNATVVVFCHNHPSNNIQPSRADD 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L + DHII+G F S++ + Sbjct: 193 QLTRQLKEGCDFLRLFFLDHIIVGDGKFFSYREEGRL 229 >gi|321272297|gb|ADW80182.1| putative DNA repair protein RadC [Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA1] gi|321272349|gb|ADW80230.1| putative DNA repair protein RadC [Wolbachia endosymbiont wVitB of Nasonia vitripennis phage WOVitB] Length = 221 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++ D+ L E GT+D VP YIRE+ ++ L ATSII+ HNHP G PSD D Sbjct: 126 IYFDQKCRLKG-EEVFTGTVDKVPFYIREVTRKALIRKATSIIISHNHPEGRLKPSDEDE 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ + I + DHIII + SFK ++ Sbjct: 185 AVTKDLAKACQTIGIRLMDHIIITSVGYFSFKEQGLL 221 >gi|15672989|ref|NP_267163.1| DNA repair protein RadC [Lactococcus lactis subsp. lactis Il1403] gi|13878681|sp|Q9CGT5|Y1007_LACLA RecName: Full=UPF0758 protein LL1007 gi|12723955|gb|AAK05105.1|AE006335_1 DNA repair protein RadC [Lactococcus lactis subsp. lactis Il1403] gi|326406552|gb|ADZ63623.1| DNA repair protein RadC [Lactococcus lactis subsp. lactis CV56] Length = 226 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 46/93 (49%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD N +I + G ++ REI+ ++ + +++ HNHPSGN PS AD Sbjct: 130 YLDGQNRIIEKKTIFIGAVNQATASPREILYHAIKNLSVGLLVAHNHPSGNLKPSQADKI 189 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T I + + I DHII+G + SF+ Sbjct: 190 FTTKIKKSCEDVGINFIDHIIVGAGNYFSFREE 222 >gi|150005007|ref|YP_001299751.1| putative DNA repair protein [Bacteroides vulgatus ATCC 8482] gi|294776369|ref|ZP_06741848.1| DNA repair protein [Bacteroides vulgatus PC510] gi|149933431|gb|ABR40129.1| putative DNA repair protein [Bacteroides vulgatus ATCC 8482] gi|294449785|gb|EFG18306.1| DNA repair protein [Bacteroides vulgatus PC510] Length = 150 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ N + + S+G + + ++ I+Q L++ A+ IIL HNHPSGN PS+ D Sbjct: 54 MFLNRANKALGVSLISKGGMAETVMDVKIILQTALKVHASGIILSHNHPSGNLRPSEPDK 113 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L++ + DHII+ ++++ SF +I Sbjct: 114 QITSKIKEACKVLDLHLLDHIILTEESYYSFADEGLI 150 >gi|261378701|ref|ZP_05983274.1| DNA repair protein RadC [Neisseria cinerea ATCC 14685] gi|269144853|gb|EEZ71271.1| DNA repair protein RadC [Neisseria cinerea ATCC 14685] Length = 225 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N LI+ SRGT+ +YIREIV+ L+ A S+I+ HNHP G+ PS DI Sbjct: 128 LLLNRQNQLISVRELSRGTVAENTLYIREIVKLALDEYADSLIIAHNHPGGSAEPSHEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + ++ +++ + DH I+ + SF+ L ++ Sbjct: 188 AFTGRLAQAMSLVDVSLLDHFIVTSRSVCSFRQLGLM 224 >gi|58697136|ref|ZP_00372568.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila simulans] gi|225630223|ref|YP_002727014.1| DNA repair protein RadC [Wolbachia sp. wRi] gi|58536565|gb|EAL59914.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila simulans] gi|225592204|gb|ACN95223.1| DNA repair protein RadC [Wolbachia sp. wRi] Length = 224 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 68/97 (70%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++++K LIA+++Q+ GT+D P+Y+REI++R L + +TSI++ HNHPS + PS++DI Sbjct: 128 IYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPSNSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DHIII ++ SFK R++ Sbjct: 188 SLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 224 >gi|58698852|ref|ZP_00373725.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of Drosophila ananassae] gi|58534631|gb|EAL58757.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of Drosophila ananassae] Length = 225 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 68/97 (70%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++++K LIA+++Q+ GT+D P+Y+REI++R L + +TSI++ HNHPS + PS++DI Sbjct: 129 IYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPSNSDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DHIII ++ SFK R++ Sbjct: 189 SLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 225 >gi|47093527|ref|ZP_00231288.1| DNA repair protein C [Listeria monocytogenes str. 4b H7858] gi|47018087|gb|EAL08859.1| DNA repair protein RadC [Listeria monocytogenes str. 4b H7858] gi|328468072|gb|EGF39078.1| putative DNA repair protein RadC [Listeria monocytogenes 1816] Length = 147 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N ++A G+++ V+ RE+ + + + S+IL H HPSG+ PS DI Sbjct: 50 MCLNTKNNVVAVHRCHVGSLNSSIVHPREVFKSAILNNVASVILAHQHPSGDIKPSMEDI 109 Query: 61 NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97 N+T+ ++ L I V DH+I+ ++F S K I Sbjct: 110 NVTKRLVEAGKLLGIEVLDHLIVNSDNSFTSLKERGYI 147 >gi|317473887|ref|ZP_07933167.1| DNA repair protein [Bacteroides eggerthii 1_2_48FAA] gi|316909964|gb|EFV31638.1| DNA repair protein [Bacteroides eggerthii 1_2_48FAA] Length = 153 Score = 114 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ + ++ + S G I V +R I+Q L ++ +IIL HNHPSGN PS D+ Sbjct: 57 LFLNQASQVLGYTLISEGGITDTTVDVRVILQAALLTNSVAIILAHNHPSGNLKPSRQDM 116 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I V DH+I+ + SF + Sbjct: 117 EITKQVKEAARLMRITVTDHLILTDTGYYSFADEGQL 153 >gi|119510185|ref|ZP_01629323.1| DNA repair protein RadC [Nodularia spumigena CCY9414] gi|119465135|gb|EAW46034.1| DNA repair protein RadC [Nodularia spumigena CCY9414] Length = 243 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N L+ +V + GT R+I + + AT I+ HNHPSG+ PS DI Sbjct: 139 LLLDVKNRLLGTQVITIGTATETLASPRDIFREIIRQGATRAIIAHNHPSGSVEPSPEDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I + DH+I+G S + I+ Sbjct: 199 ELTRQLLAGAQLLGIPLLDHLILGNGNHQSLRENTIL 235 >gi|148360058|ref|YP_001251265.1| DNA repair protein RadC [Legionella pneumophila str. Corby] gi|296108121|ref|YP_003619822.1| DNA repair protein RadC [Legionella pneumophila 2300/99 Alcoy] gi|229485555|sp|A5IEW9|Y1989_LEGPC RecName: Full=UPF0758 protein LPC_1989 gi|148281831|gb|ABQ55919.1| DNA repair protein RadC [Legionella pneumophila str. Corby] gi|295650023|gb|ADG25870.1| DNA repair protein RadC [Legionella pneumophila 2300/99 Alcoy] Length = 227 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +IA E GTI+ VY R IV+R L+L+A ++IL HNHPSG + S D Sbjct: 128 LFLDSQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDF 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVS-FKGLRII 97 +T+ I L+ ++ + DHI+IG + S F + + Sbjct: 188 AITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKWV 225 >gi|15900956|ref|NP_345560.1| DNA repair protein RadC [Streptococcus pneumoniae TIGR4] gi|111657603|ref|ZP_01408339.1| hypothetical protein SpneT_02001213 [Streptococcus pneumoniae TIGR4] gi|148985060|ref|ZP_01818303.1| DNA repair protein RadC [Streptococcus pneumoniae SP3-BS71] gi|148989131|ref|ZP_01820521.1| DNA repair protein RadC [Streptococcus pneumoniae SP6-BS73] gi|148994162|ref|ZP_01823477.1| DNA repair protein RadC [Streptococcus pneumoniae SP9-BS68] gi|148998354|ref|ZP_01825796.1| DNA repair protein RadC [Streptococcus pneumoniae SP11-BS70] gi|149003796|ref|ZP_01828628.1| DNA repair protein RadC [Streptococcus pneumoniae SP14-BS69] gi|149012918|ref|ZP_01833831.1| DNA repair protein RadC [Streptococcus pneumoniae SP19-BS75] gi|149024890|ref|ZP_01836291.1| DNA repair protein RadC [Streptococcus pneumoniae SP23-BS72] gi|168483163|ref|ZP_02708115.1| DNA repair protein RadC [Streptococcus pneumoniae CDC1873-00] gi|168486495|ref|ZP_02711003.1| DNA repair protein RadC [Streptococcus pneumoniae CDC1087-00] gi|168488931|ref|ZP_02713130.1| DNA repair protein RadC [Streptococcus pneumoniae SP195] gi|168576187|ref|ZP_02722081.1| DNA repair protein RadC [Streptococcus pneumoniae MLV-016] gi|169834408|ref|YP_001694513.1| DNA repair protein RadC [Streptococcus pneumoniae Hungary19A-6] gi|194397499|ref|YP_002037719.1| DNA repair protein RadC [Streptococcus pneumoniae G54] gi|221231830|ref|YP_002510982.1| DNA repair protein RadC [Streptococcus pneumoniae ATCC 700669] gi|225856732|ref|YP_002738243.1| DNA repair protein RadC [Streptococcus pneumoniae P1031] gi|225858901|ref|YP_002740411.1| DNA repair protein RadC [Streptococcus pneumoniae 70585] gi|225861054|ref|YP_002742563.1| DNA repair protein RadC [Streptococcus pneumoniae Taiwan19F-14] gi|237650761|ref|ZP_04525013.1| DNA repair protein RadC [Streptococcus pneumoniae CCRI 1974] gi|237822348|ref|ZP_04598193.1| DNA repair protein RadC [Streptococcus pneumoniae CCRI 1974M2] gi|298230847|ref|ZP_06964528.1| DNA repair protein RadC [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255794|ref|ZP_06979380.1| DNA repair protein RadC [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502896|ref|YP_003724836.1| DNA repair protein RadC [Streptococcus pneumoniae TCH8431/19A] gi|303254201|ref|ZP_07340313.1| DNA repair protein RadC [Streptococcus pneumoniae BS455] gi|303259751|ref|ZP_07345726.1| DNA repair protein RadC [Streptococcus pneumoniae SP-BS293] gi|303262926|ref|ZP_07348861.1| DNA repair protein RadC [Streptococcus pneumoniae SP14-BS292] gi|303264889|ref|ZP_07350805.1| DNA repair protein RadC [Streptococcus pneumoniae BS397] gi|303266869|ref|ZP_07352747.1| DNA repair protein RadC [Streptococcus pneumoniae BS457] gi|303268906|ref|ZP_07354691.1| DNA repair protein RadC [Streptococcus pneumoniae BS458] gi|307067729|ref|YP_003876695.1| DNA repair protein [Streptococcus pneumoniae AP200] gi|25009039|sp|Q97QW0|Y1088_STRPN RecName: Full=UPF0758 protein SP_1088 gi|238688293|sp|B1IBM8|Y1181_STRPI RecName: Full=UPF0758 protein SPH_1181 gi|238690819|sp|B5E4K3|Y1010_STRP4 RecName: Full=UPF0758 protein SPG_1010 gi|254789661|sp|C1C785|Y1163_STRP7 RecName: Full=UPF0758 protein SP70585_1163 gi|254789662|sp|B8ZPT5|Y1009_STRPJ RecName: Full=UPF0758 protein SPN23F10090 gi|254789665|sp|C1CKF5|Y1095_STRZP RecName: Full=UPF0758 protein SPP_1095 gi|254789666|sp|C1CRJ1|Y1135_STRZT RecName: Full=UPF0758 protein SPT_1135 gi|14972563|gb|AAK75200.1| DNA repair protein RadC [Streptococcus pneumoniae TIGR4] gi|147755751|gb|EDK62796.1| DNA repair protein RadC [Streptococcus pneumoniae SP11-BS70] gi|147758242|gb|EDK65244.1| DNA repair protein RadC [Streptococcus pneumoniae SP14-BS69] gi|147763207|gb|EDK70147.1| DNA repair protein RadC [Streptococcus pneumoniae SP19-BS75] gi|147922758|gb|EDK73875.1| DNA repair protein RadC [Streptococcus pneumoniae SP3-BS71] gi|147925354|gb|EDK76432.1| DNA repair protein RadC [Streptococcus pneumoniae SP6-BS73] gi|147927405|gb|EDK78435.1| DNA repair protein RadC [Streptococcus pneumoniae SP9-BS68] gi|147929513|gb|EDK80507.1| DNA repair protein RadC [Streptococcus pneumoniae SP23-BS72] gi|168996910|gb|ACA37522.1| DNA repair protein RadC [Streptococcus pneumoniae Hungary19A-6] gi|172043536|gb|EDT51582.1| DNA repair protein RadC [Streptococcus pneumoniae CDC1873-00] gi|183570483|gb|EDT91011.1| DNA repair protein RadC [Streptococcus pneumoniae CDC1087-00] gi|183572425|gb|EDT92953.1| DNA repair protein RadC [Streptococcus pneumoniae SP195] gi|183577950|gb|EDT98478.1| DNA repair protein RadC [Streptococcus pneumoniae MLV-016] gi|194357166|gb|ACF55614.1| DNA repair protein RadC [Streptococcus pneumoniae G54] gi|220674290|emb|CAR68832.1| DNA repair protein RadC [Streptococcus pneumoniae ATCC 700669] gi|225720674|gb|ACO16528.1| DNA repair protein RadC [Streptococcus pneumoniae 70585] gi|225724639|gb|ACO20491.1| DNA repair protein RadC [Streptococcus pneumoniae P1031] gi|225728037|gb|ACO23888.1| DNA repair protein RadC [Streptococcus pneumoniae Taiwan19F-14] gi|298238491|gb|ADI69622.1| DNA repair protein RadC [Streptococcus pneumoniae TCH8431/19A] gi|301794205|emb|CBW36624.1| DNA repair protein RadC [Streptococcus pneumoniae INV104] gi|301800059|emb|CBW32654.1| DNA repair protein RadC [Streptococcus pneumoniae OXC141] gi|301802020|emb|CBW34749.1| DNA repair protein RadC [Streptococcus pneumoniae INV200] gi|302598872|gb|EFL65906.1| DNA repair protein RadC [Streptococcus pneumoniae BS455] gi|302635903|gb|EFL66403.1| DNA repair protein RadC [Streptococcus pneumoniae SP14-BS292] gi|302638956|gb|EFL69416.1| DNA repair protein RadC [Streptococcus pneumoniae SP-BS293] gi|302641524|gb|EFL71886.1| DNA repair protein RadC [Streptococcus pneumoniae BS458] gi|302643567|gb|EFL73836.1| DNA repair protein RadC [Streptococcus pneumoniae BS457] gi|302645577|gb|EFL75808.1| DNA repair protein RadC [Streptococcus pneumoniae BS397] gi|306409266|gb|ADM84693.1| DNA repair protein [Streptococcus pneumoniae AP200] gi|327389354|gb|EGE87699.1| hypothetical protein SPAR5_1040 [Streptococcus pneumoniae GA04375] gi|332073448|gb|EGI83927.1| RadC, DNA repair family protein [Streptococcus pneumoniae GA17570] gi|332075422|gb|EGI85891.1| hypothetical protein SPAR68_1132 [Streptococcus pneumoniae GA41301] Length = 226 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G++ REI+ ++ ATS+ILVHNHPSG PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSQNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + I++ DH+I+ + S++ Sbjct: 189 HVTKLVKEACELMGIVLLDHLIVSHSNYFSYREK 222 >gi|284049159|ref|YP_003399498.1| DNA repair protein RadC [Acidaminococcus fermentans DSM 20731] gi|283953380|gb|ADB48183.1| DNA repair protein RadC [Acidaminococcus fermentans DSM 20731] Length = 220 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ +I E S G+++ V+ RE L A +I+ VHNHPSG+P PS D Sbjct: 124 VLLNSKGKVIGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTPSREDR 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + T + I + DH+IIG + SFK ++ Sbjct: 184 ELTRTLWDTGKVMGIPLVDHLIIGDGVYYSFKEHGLL 220 >gi|154483531|ref|ZP_02025979.1| hypothetical protein EUBVEN_01235 [Eubacterium ventriosum ATCC 27560] gi|149735441|gb|EDM51327.1| hypothetical protein EUBVEN_01235 [Eubacterium ventriosum ATCC 27560] Length = 231 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD LI D ++GT++ + REI L A +IIL+HNHPSG+ PS D+ Sbjct: 134 MFLDTKCHLIKDMTITKGTVNQSLISSREIFVEALRCDAVNIILIHNHPSGDCTPSRDDM 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T I + I V DHIIIG ++ S + L+++ Sbjct: 194 ASTLAISKAGKIIGINVLDHIIIGDRSYSSLRELKLM 230 >gi|298386802|ref|ZP_06996357.1| DNA repair protein RadC [Bacteroides sp. 1_1_14] gi|298260476|gb|EFI03345.1| DNA repair protein RadC [Bacteroides sp. 1_1_14] Length = 231 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ LI S G ID +R I++ L AT I +VHNHPSGN PS D Sbjct: 135 LLLNQATRLIDKVRISAGGIDGTYTDVRTILREALLQRATQIAVVHNHPSGNIQPSQPDR 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++I + +NI + DH+I+ +D F SF ++ Sbjct: 195 TLTEHIRRAADTMNIRLIDHVIVCEDKFYSFADEGLL 231 >gi|296115179|ref|ZP_06833820.1| DNA repair protein RadC [Gluconacetobacter hansenii ATCC 23769] gi|295978280|gb|EFG85017.1| DNA repair protein RadC [Gluconacetobacter hansenii ATCC 23769] Length = 230 Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD LI D V GT+D PVY RE+++R L+L A +IL HNHPSG+P PS DI Sbjct: 129 LFLDAEYRLIEDRVMGVGTVDQAPVYPREVMRRALDLDARILILAHNHPSGDPMPSATDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT +I + + I +HDH ++G +SF+ + +I Sbjct: 189 QMTLHIQQVASVMGIHLHDHFVVGNGRSISFRRMGLI 225 >gi|172061461|ref|YP_001809113.1| DNA repair protein RadC [Burkholderia ambifaria MC40-6] gi|238692852|sp|B1YV93|Y2419_BURA4 RecName: Full=UPF0758 protein BamMC406_2419 gi|171993978|gb|ACB64897.1| DNA repair protein RadC [Burkholderia ambifaria MC40-6] Length = 258 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI E +RG++ + VY REIV+R L L+A ++I+ HNHPSG PS D Sbjct: 162 LYLDARHGLIDVEESARGSLTRMAVYPREIVRRALVLNAAALIIAHNHPSGAVQPSAEDR 221 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++ + DH+++G SF + Sbjct: 222 RLTRVLHEALALIDAKLLDHVVVGTADTFSFARAGWL 258 >gi|115352599|ref|YP_774438.1| DNA repair protein RadC [Burkholderia ambifaria AMMD] gi|122322429|sp|Q0BCL9|Y2548_BURCM RecName: Full=UPF0758 protein Bamb_2548 gi|115282587|gb|ABI88104.1| DNA replication and repair protein RadC [Burkholderia ambifaria AMMD] Length = 258 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI E +RG++ + VY REIV+R L L+A ++I+ HNHPSG PS D Sbjct: 162 LYLDARHGLIDVEESARGSLTRMAVYPREIVRRALVLNAAALIIAHNHPSGAVQPSAEDR 221 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++ + DH+++G SF + Sbjct: 222 RLTRVLHEALALIDAKLLDHVVVGTADTFSFARAGWL 258 >gi|113476272|ref|YP_722333.1| DNA repair protein RadC [Trichodesmium erythraeum IMS101] gi|123160702|sp|Q111G4|Y2667_TRIEI RecName: Full=UPF0758 protein Tery_2667 gi|110167320|gb|ABG51860.1| DNA repair protein RadC [Trichodesmium erythraeum IMS101] Length = 243 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 50/93 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N L+ +V + GT + REI + A+ +I+ HNHPSGN PS DI Sbjct: 139 LLLDVKNRLLGTQVITIGTATETLAHPREIFGEVIRQGASRVIISHNHPSGNVEPSPEDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 N+T+ ++ L+I + DHIIIG S + Sbjct: 199 NLTKQLLAGAQILDIPLLDHIIIGNGEHSSLRQ 231 >gi|319902231|ref|YP_004161959.1| DNA repair protein RadC [Bacteroides helcogenes P 36-108] gi|319417262|gb|ADV44373.1| DNA repair protein RadC [Bacteroides helcogenes P 36-108] Length = 196 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 50/95 (52%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + LI S G I +R I++ +E SAT I+VHNHPSGN PS D ++ Sbjct: 102 LNNASRLIKKVRVSVGGISQTAADVRLIMRILVEASATQFIVVHNHPSGNKQPSRDDKHI 161 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + +I + DHIII D + SF ++ Sbjct: 162 TERVKKAGELFDIRLIDHIIIAGDTYYSFGDEGLL 196 >gi|315122683|ref|YP_004063172.1| DNA repair protein RadC [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496085|gb|ADR52684.1| DNA repair protein RadC [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 237 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 84/97 (86%), Positives = 92/97 (94%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+KH++LIADE+QSRGTIDHVPVY+REIV RCLELSA+SIILVHNHPSGNPNPS+ADI Sbjct: 141 LFLNKHDVLIADEIQSRGTIDHVPVYLREIVYRCLELSASSIILVHNHPSGNPNPSNADI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MTQNII+TL PLNI VHDHIIIGKD FVSFKGLRII Sbjct: 201 GMTQNIISTLTPLNITVHDHIIIGKDEFVSFKGLRII 237 >gi|242373953|ref|ZP_04819527.1| DNA repair protein RadC [Staphylococcus epidermidis M23864:W1] gi|242348307|gb|EES39909.1| DNA repair protein RadC [Staphylococcus epidermidis M23864:W1] Length = 229 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+I +GT++ ++ RE+ + S+ ++I+VHNHPSG+ PS DI Sbjct: 128 LLLNSKNIVIKQSWIYKGTLNSSIIHPREVFNIAIRESSNAMIVVHNHPSGDVTPSREDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I + DHIIIG + F S Sbjct: 188 TTTLRLKECGAILGIELLDHIIIGDNKFTSLVEAGY 223 >gi|322375315|ref|ZP_08049828.1| DNA repair protein RadC [Streptococcus sp. C300] gi|321279578|gb|EFX56618.1| DNA repair protein RadC [Streptococcus sp. C300] Length = 226 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 50/94 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ L+ ATS+ILVHNHPSG +PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVSPSRNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + I+ DH+I+ + S++ Sbjct: 189 HVTKLVKEACELMGIVFLDHLIVSHSDYFSYREK 222 >gi|293365525|ref|ZP_06612234.1| DNA repair protein RadC [Streptococcus oralis ATCC 35037] gi|307703484|ref|ZP_07640426.1| DNA repair protein radC [Streptococcus oralis ATCC 35037] gi|291315893|gb|EFE56337.1| DNA repair protein RadC [Streptococcus oralis ATCC 35037] gi|307622891|gb|EFO01886.1| DNA repair protein radC [Streptococcus oralis ATCC 35037] Length = 226 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 50/94 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ L+ ATS+ILVHNHPSG +PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVSPSRNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + I+ DH+I+ + S++ Sbjct: 189 HVTKLVKEACELMGIVFLDHLIVSHSDYFSYREK 222 >gi|215778383|ref|YP_002261523.1| DNA repair protein RadC [Aliivibrio salmonicida LFI1238] gi|208011428|emb|CAQ81892.1| DNA repair protein RadC [Aliivibrio salmonicida LFI1238] Length = 154 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI S GTID VY RE+V+ L +A ++I HNHPSG PS +D Sbjct: 58 LLLDNQHRLIEFVEHSVGTIDSASVYPREVVKLALHYNAAAVIFTHNHPSGIAEPSQSDR 117 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ L +++ V DH +IG V+F I Sbjct: 118 KITARLLDALALIDVRVLDHFVIGCGETVAFSKRGWI 154 >gi|149006239|ref|ZP_01829951.1| DNA repair protein RadC [Streptococcus pneumoniae SP18-BS74] gi|168491982|ref|ZP_02716125.1| DNA repair protein RadC [Streptococcus pneumoniae CDC0288-04] gi|168494522|ref|ZP_02718665.1| DNA repair protein RadC [Streptococcus pneumoniae CDC3059-06] gi|225854584|ref|YP_002736096.1| DNA repair protein RadC [Streptococcus pneumoniae JJA] gi|307127380|ref|YP_003879411.1| DNA repair protein RadC [Streptococcus pneumoniae 670-6B] gi|254789664|sp|C1CE75|Y1027_STRZJ RecName: Full=UPF0758 protein SPJ_1027 gi|147762016|gb|EDK68978.1| DNA repair protein RadC [Streptococcus pneumoniae SP18-BS74] gi|183573793|gb|EDT94321.1| DNA repair protein RadC [Streptococcus pneumoniae CDC0288-04] gi|183575616|gb|EDT96144.1| DNA repair protein RadC [Streptococcus pneumoniae CDC3059-06] gi|225722254|gb|ACO18107.1| DNA repair protein RadC [Streptococcus pneumoniae JJA] gi|306484442|gb|ADM91311.1| DNA repair protein RadC [Streptococcus pneumoniae 670-6B] gi|332075043|gb|EGI85514.1| hypothetical protein SPAR148_1048 [Streptococcus pneumoniae GA17545] Length = 226 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G++ REI+ ++ ATS+ILVHNHPSG PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSQNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + I++ DH+I+ + S++ Sbjct: 189 HVTKLVKEACELMGIVLLDHLIVSHSNYFSYREK 222 >gi|186475352|ref|YP_001856822.1| DNA repair protein RadC [Burkholderia phymatum STM815] gi|184191811|gb|ACC69776.1| DNA repair protein RadC [Burkholderia phymatum STM815] Length = 242 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI E SRG++ + VY REIV+R L ++A S+I+ HNHPSG PS +D Sbjct: 146 LFLDTRHRLIRSEENSRGSLTRMAVYPREIVRRALSVNAASLIVAHNHPSGAVKPSASDR 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T + TL +++ + DH++IG SF Sbjct: 206 QLTHVLRDTLALIDVQLIDHLVIGAHDTFSFARAGW 241 >gi|116048641|ref|YP_792559.1| hypothetical protein PA14_54860 [Pseudomonas aeruginosa UCBPP-PA14] gi|115583862|gb|ABJ09877.1| hypothetical protein PA14_54860 [Pseudomonas aeruginosa UCBPP-PA14] Length = 202 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 5/97 (5%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD RGT++ P+Y R +V+R L +A +++ HNHPSG PS ADI Sbjct: 111 VFLDAQ-----WRALFRGTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATPSQADI 165 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + LN ++I + DH +IG+ SF +++ Sbjct: 166 AATRQLKAALNLVDIELLDHFVIGRGEPFSFFDAQLL 202 >gi|57239372|ref|YP_180508.1| DNA repair protein radC-like protein [Ehrlichia ruminantium str. Welgevonden] gi|58579339|ref|YP_197551.1| DNA repair protein radC-like protein [Ehrlichia ruminantium str. Welgevonden] gi|57161451|emb|CAH58376.1| DNA repair protein RadC [Ehrlichia ruminantium str. Welgevonden] gi|58417965|emb|CAI27169.1| DNA repair protein radC homolog [Ehrlichia ruminantium str. Welgevonden] Length = 230 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 63/97 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ L+ADE+Q GT++ P+YIRE++++ L L ATSII+ HNHPSG+ PS ADI Sbjct: 134 LYLNTKFKLLADEIQDVGTVNQTPLYIREVIKKSLLLGATSIIIAHNHPSGDATPSKADI 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + + + I + DH+I+ + SFK ++ Sbjct: 194 EVTNQLAIACHNMGITLIDHVIVTSNTHYSFKSHDLL 230 >gi|254479635|ref|ZP_05092939.1| DNA repair protein RadC [Carboxydibrachium pacificum DSM 12653] gi|214034431|gb|EEB75201.1| DNA repair protein RadC [Carboxydibrachium pacificum DSM 12653] Length = 208 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 38/87 (43%), Positives = 54/87 (62%) Query: 10 IADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITT 69 IA E S G+++ V+ RE+ + +E SA+SIILVHNHPSG+P PS D+ +T+ ++ Sbjct: 118 IAIETISIGSLNTSIVHPREVFKAAIERSASSIILVHNHPSGDPTPSREDVEVTKRLVEA 177 Query: 70 LNPLNIIVHDHIIIGKDAFVSFKGLRI 96 N L I V DH+IIG +S K Sbjct: 178 GNILGIKVLDHVIIGDGRGISLKEKGY 204 >gi|293378952|ref|ZP_06625107.1| putative DNA repair protein RadC [Enterococcus faecium PC4.1] gi|292642493|gb|EFF60648.1| putative DNA repair protein RadC [Enterococcus faecium PC4.1] Length = 147 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N ++A G+++ V+ RE+ + + +A S+IL H HPSG+ PS DI Sbjct: 50 MCLNTRNNVVAVHRCHVGSLNASLVHPREVFKSAILNNAASVILAHQHPSGDITPSMEDI 109 Query: 61 NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97 N+T+ + L I V DH+++ ++F S K I Sbjct: 110 NVTKRLAEAGKLLGIEVLDHLVVNSDNSFTSLKERGYI 147 >gi|160892638|ref|ZP_02073428.1| hypothetical protein CLOL250_00168 [Clostridium sp. L2-50] gi|156865679|gb|EDO59110.1| hypothetical protein CLOL250_00168 [Clostridium sp. L2-50] Length = 232 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L D + L+ + S GT+DH V R+I L+ A I+L+HNHPSGNP PS+ DI Sbjct: 135 LMFDSSHHLLKECRLSEGTVDHAVVSPRDIFIDALKYQAVYIVLLHNHPSGNPEPSNPDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I + DHII+G + FVS II Sbjct: 195 LLTKRVEEAGKTLGIRLSDHIILGNNCFVSLAERGII 231 >gi|160935804|ref|ZP_02083179.1| hypothetical protein CLOBOL_00694 [Clostridium bolteae ATCC BAA-613] gi|158441548|gb|EDP19258.1| hypothetical protein CLOBOL_00694 [Clostridium bolteae ATCC BAA-613] Length = 178 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ A E+ + G ++ + R+I + + +A II HNHPSG+P PS D + Sbjct: 75 LNTKLEPQALEIAAVGGLNACSIDCRDIFKHAVLNNAAFIICFHNHPSGDPKPSMEDRKL 134 Query: 63 TQNIITTLNPLNIIVHDHIIIGKD-AFVSFKGLRII 97 T+ + L I + DHII+G+ SFK ++ Sbjct: 135 TKRLEECGKILGIPLIDHIIVGEGPCCYSFKEQGML 170 >gi|220907196|ref|YP_002482507.1| DNA repair protein RadC [Cyanothece sp. PCC 7425] gi|254789645|sp|B8HRF8|Y1778_CYAP4 RecName: Full=UPF0758 protein Cyan7425_1778 gi|219863807|gb|ACL44146.1| DNA repair protein RadC [Cyanothece sp. PCC 7425] Length = 243 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 52/93 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI +V + GT + R+I + + AT +I+ HNHPSGN PS D+ Sbjct: 139 LLLDVRHRLIGTQVITIGTATETIAHPRDIFREVIRQGATRVIVAHNHPSGNVEPSPEDL 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 +TQ +++ L+I + DH+I+G F S + Sbjct: 199 ALTQQLLSGAKFLDIPLLDHLILGNGNFRSLRQ 231 >gi|293371990|ref|ZP_06618389.1| DNA repair protein [Bacteroides ovatus SD CMC 3f] gi|292633001|gb|EFF51583.1| DNA repair protein [Bacteroides ovatus SD CMC 3f] Length = 148 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 49/95 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ ++ + S G I +R I+Q L ++ +IIL HNHPSGN PS D+ Sbjct: 52 LFLNQAKQVLGYTLISEGGITETCADVRVILQAALLTNSVAIILAHNHPSGNLKPSRQDM 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + + I V DH+I+ + SF Sbjct: 112 EITKQVKNAAQLMRITVLDHLILTDAGYYSFSDEG 146 >gi|227877311|ref|ZP_03995384.1| DNA repair protein [Lactobacillus crispatus JV-V01] gi|256842873|ref|ZP_05548361.1| DNA repair protein [Lactobacillus crispatus 125-2-CHN] gi|256848753|ref|ZP_05554187.1| DNA repair protein [Lactobacillus crispatus MV-1A-US] gi|262045839|ref|ZP_06018803.1| DNA repair protein [Lactobacillus crispatus MV-3A-US] gi|293381707|ref|ZP_06627688.1| DNA repair protein RadC [Lactobacillus crispatus 214-1] gi|312977608|ref|ZP_07789355.1| DNA repair protein RadC [Lactobacillus crispatus CTV-05] gi|227863167|gb|EEJ70613.1| DNA repair protein [Lactobacillus crispatus JV-V01] gi|256614293|gb|EEU19494.1| DNA repair protein [Lactobacillus crispatus 125-2-CHN] gi|256714292|gb|EEU29279.1| DNA repair protein [Lactobacillus crispatus MV-1A-US] gi|260573798|gb|EEX30354.1| DNA repair protein [Lactobacillus crispatus MV-3A-US] gi|290921754|gb|EFD98775.1| DNA repair protein RadC [Lactobacillus crispatus 214-1] gi|310895347|gb|EFQ44414.1| DNA repair protein RadC [Lactobacillus crispatus CTV-05] Length = 210 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L++D N +IA++ +GT++ + REI + + + I + HNHPSG PS +D+ Sbjct: 111 LYIDNSNHIIAEKKLFQGTLNRSIAHPREIFRWAVIYGCSGIFIAHNHPSGKLTPSASDL 170 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+++ + I DH I+G+ ++S + Sbjct: 171 ELTESLRQAAKMMKIDFLDHFIVGEGQYLSLREK 204 >gi|226227362|ref|YP_002761468.1| DNA repair protein RadC [Gemmatimonas aurantiaca T-27] gi|226090553|dbj|BAH38998.1| DNA repair protein RadC [Gemmatimonas aurantiaca T-27] Length = 244 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 36/95 (37%), Positives = 58/95 (61%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + L D + +RG ++ V+ RE+ + + A ++ILVHNHPSG+P PS D + Sbjct: 150 LDAQHRLERDVLITRGLLNSSLVHPREVFREAIAERAAAVILVHNHPSGDPTPSAEDRAV 209 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ L+I VHDHII+G+ +VSF ++ Sbjct: 210 TEQLVAAGRLLDIPVHDHIIVGRGRYVSFAEAGLL 244 >gi|304437696|ref|ZP_07397648.1| DNA repair protein RadC [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369329|gb|EFM23002.1| DNA repair protein RadC [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 225 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 51/95 (53%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L N L+ S GT+ + V+ RE+ + + A +I+ HNHPSG+P PS D + Sbjct: 131 LSAKNELLMLADVSTGTLTNALVHPREVFEPAIRCGAAHVIVAHNHPSGDPTPSAEDHRL 190 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+++ L I V DH+++ +D F SF ++ Sbjct: 191 TRSLYEAGKLLGIPVTDHVVVARDGFFSFAEEGLL 225 >gi|154491063|ref|ZP_02031004.1| hypothetical protein PARMER_00982 [Parabacteroides merdae ATCC 43184] gi|154088811|gb|EDN87855.1| hypothetical protein PARMER_00982 [Parabacteroides merdae ATCC 43184] Length = 208 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + +++ N ++ S G ++ IR I+Q + +A++IIL HNHPSGN PS D Sbjct: 112 ILMNRANKVLGVCHISEGGLNETSADIRIIMQAAILGNASAIILAHNHPSGNIQPSMQDD 171 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I + DH+II + + S+ I Sbjct: 172 QVTKRVKEIAKLIGINLLDHLIITDETYYSYSENGRI 208 >gi|150005694|ref|YP_001300438.1| DNA repair protein [Bacteroides vulgatus ATCC 8482] gi|149934118|gb|ABR40816.1| DNA repair protein [Bacteroides vulgatus ATCC 8482] Length = 153 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ + ++ + S G I V +R I+Q L ++ ++IL HNHPSGN PS D+ Sbjct: 57 LFLNQSSQVLGYTLISEGGITDTTVDVRVILQAALLTNSVALILAHNHPSGNLKPSRQDM 116 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I V DH+I+ + SF + Sbjct: 117 EITKQVKNAAQLMRITVIDHLILTDAGYYSFADEGQL 153 >gi|295692678|ref|YP_003601288.1| DNA repair protein radc [Lactobacillus crispatus ST1] gi|295030784|emb|CBL50263.1| DNA repair protein RadC [Lactobacillus crispatus ST1] Length = 210 Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L++D N +IA++ +GT++ + REI + + + I + HNHPSG PS +D+ Sbjct: 111 LYIDNSNHIIAEKKLFQGTLNRSIAHPREIFRWAVIYGCSGIFIAHNHPSGKLTPSASDL 170 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+++ + I DH I+G+ ++S + Sbjct: 171 ELTESLRQAAKMMKIDFLDHFIVGEGQYLSLREK 204 >gi|163752940|ref|ZP_02160064.1| putative DNA repair protein [Kordia algicida OT-1] gi|161326672|gb|EDP97997.1| putative DNA repair protein [Kordia algicida OT-1] Length = 231 Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N ++ S+G I V IR +++ LE+ A +IIL HNHPSG S AD Sbjct: 135 IYLNNSNKVLKKTRLSKGGITGTLVDIRLVLKTALEVGAVAIILAHNHPSGTLKASAADK 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + ++I V DH+II + + SF ++ Sbjct: 195 AITKKLKLGAENIDIKVLDHLIITEKEYFSFADENLL 231 >gi|270292791|ref|ZP_06199002.1| DNA repair protein RadC [Streptococcus sp. M143] gi|270278770|gb|EFA24616.1| DNA repair protein RadC [Streptococcus sp. M143] Length = 231 Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 50/94 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ L+ ATS+ILVHNHPSG +PS D Sbjct: 134 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVSPSRNDD 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + I+ DH+I+ + S++ Sbjct: 194 HVTKLVKEACELMGIVFLDHLIVSHSDYFSYREK 227 >gi|146297589|ref|YP_001181360.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145411165|gb|ABP68169.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 163 Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD L A SRGT+D P REI +R L + SII+ HNHP G+ PS DI Sbjct: 67 LCLDVQLNLNAIFEVSRGTLDMAPANTREIFKRVLLTNCHSIIIAHNHPGGSAKPSMDDI 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I L+I ++DHII+ ++ + SF I+ Sbjct: 127 KTTEKIKEAAQLLDIRLNDHIIVTEEDYYSFSQAGIL 163 >gi|60680744|ref|YP_210888.1| putative DNA repair protein [Bacteroides fragilis NCTC 9343] gi|60492178|emb|CAH06941.1| putative DNA repair protein [Bacteroides fragilis NCTC 9343] Length = 150 Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ N + + S+G + + ++ I+Q L++ A+ IIL HNHPSGN PS+ D Sbjct: 54 MFLNRANKALGVSLISKGGMAETVMDVKIILQTALKVHASGIILSHNHPSGNLRPSEPDK 113 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L++ + DHII+ ++++ SF +I Sbjct: 114 QITSKIKEACKVLDLHLLDHIILTEESYYSFADEGLI 150 >gi|223044114|ref|ZP_03614153.1| DNA repair protein RadC [Staphylococcus capitis SK14] gi|222442508|gb|EEE48614.1| DNA repair protein RadC [Staphylococcus capitis SK14] Length = 227 Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+I +GT++ ++ RE+ + S+ +II+VHNHPSG+ PS DI Sbjct: 128 LLLNSKNIVIKQSWIFKGTLNSSIIHPREVFNIAIRESSNAIIIVHNHPSGDVTPSREDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + L I V DHIIIG + F S Sbjct: 188 TTTLRLKECGAILGIDVLDHIIIGDNQFTSLVEAGY 223 >gi|331266304|ref|YP_004325934.1| DNA repair protein RadC [Streptococcus oralis Uo5] gi|326682976|emb|CBZ00593.1| DNA repair protein RadC [Streptococcus oralis Uo5] Length = 226 Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 50/94 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ L+ ATS+ILVHNHPSG +PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVSPSRNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + I+ DH+I+ + S++ Sbjct: 189 HVTKLVKEACELMGIVFLDHLIVSHSDYFSYREK 222 >gi|182684160|ref|YP_001835907.1| DNA repair protein RadC [Streptococcus pneumoniae CGSP14] gi|182629494|gb|ACB90442.1| DNA repair protein RadC [Streptococcus pneumoniae CGSP14] Length = 231 Score = 113 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G++ REI+ ++ ATS+ILVHNHPSG PS D Sbjct: 134 LYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSQNDD 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + I++ DH+I+ + S++ Sbjct: 194 HVTKLVKEACELMGIVLLDHLIVSHSNYFSYREK 227 >gi|251782289|ref|YP_002996591.1| DNA repair protein RadC [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390918|dbj|BAH81377.1| DNA repair protein RadC [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127188|gb|ADX24485.1| DNA repair protein RadC [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 226 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N +I ++ GT+ REI+ + ATS+I+VHNHPSG+ +PS D Sbjct: 129 LYLDSQNRVIEEKTIFIGTVRRSIAEPREILYYACKNMATSLIVVHNHPSGSIDPSPNDY 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + L II DHII+ ++ SF+ Sbjct: 189 AFTEKIKRSCEDLGIICLDHIIVSYQSYYSFREK 222 >gi|221633793|ref|YP_002523019.1| DNA repair protein RadC-like protein [Thermomicrobium roseum DSM 5159] gi|221156245|gb|ACM05372.1| DNA repair protein radC homolog [Thermomicrobium roseum DSM 5159] Length = 261 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N ++ ++G ++ V I E+ + + + +++L+HNHPSG+P PS DI Sbjct: 161 VLLDTRNRVVRTVTVAQGHVNGAQVRIAELFREAIRANTPALVLLHNHPSGDPTPSRQDI 220 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T++ + L I V DH++IG F S + L + Sbjct: 221 ELTESAVEAGTLLGIEVVDHLVIGHGRFCSLRRLGL 256 >gi|254520497|ref|ZP_05132553.1| DNA repair protein [Clostridium sp. 7_2_43FAA] gi|226914246|gb|EEH99447.1| DNA repair protein [Clostridium sp. 7_2_43FAA] Length = 151 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 1/97 (1%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L+ N + S G+++ V+ RE+ + + ++ SIIL HNHPSG+ PS DIN Sbjct: 55 CLNTKNEPTNLNIVSIGSLNSSIVHPREVFKLAILGNSASIILFHNHPSGDTTPSKEDIN 114 Query: 62 MTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97 +T+ I + I + DHII+G + + S K II Sbjct: 115 ITERIKEAGKIIGIELIDHIILGDENKYTSLKEKGII 151 >gi|322387839|ref|ZP_08061447.1| DNA repair protein RadC [Streptococcus infantis ATCC 700779] gi|321141341|gb|EFX36838.1| DNA repair protein RadC [Streptococcus infantis ATCC 700779] Length = 226 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 50/94 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ L+ ATS+ILVHNHPSG PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVVPSPNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + +++ DH+I+ + S++ Sbjct: 189 HVTKLVKEACELMGLVLLDHLIVSHSDYFSYREK 222 >gi|291563258|emb|CBL42074.1| DNA replication and repair protein RadC [butyrate-producing bacterium SS3/4] Length = 235 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 34/88 (38%), Positives = 48/88 (54%) Query: 9 LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68 L+ D SRGT++ REI L A IIL+HNHPSG+P PS D T+ + Sbjct: 145 LLRDITVSRGTVNASCATPREIYIEALRFRACGIILLHNHPSGDPAPSREDCLFTERVRE 204 Query: 69 TLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 + + + DHIIIG +++VS + I Sbjct: 205 AGRLVGVPLLDHIIIGDNSYVSLRERGI 232 >gi|218778342|ref|YP_002429660.1| DNA repair protein RadC [Desulfatibacillum alkenivorans AK-01] gi|218759726|gb|ACL02192.1| DNA repair protein RadC [Desulfatibacillum alkenivorans AK-01] Length = 265 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N ++ E G+++ VY RE++ + L+ A++++L HNHPSGN PS DI Sbjct: 153 VYLDVQNRILNMETPFEGSLNASHVYTRELIDKALKTGASAVLLAHNHPSGNTKPSKNDI 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97 +T + T + I + +H+IIGK + SF + Sbjct: 213 QLTYTLFTAFRSVEIHLLEHLIIGKQGEYYSFADHGYL 250 >gi|237723850|ref|ZP_04554331.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229437865|gb|EEO47942.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 217 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI S G I+ PV IR I+++ L +A S I+VHNHPSG PS AD Sbjct: 121 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSGADD 180 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+I + DH+I+ + + S+ + Sbjct: 181 RLTEAVKKAAGTLDIHLLDHVIVAGNNYYSYADEGKL 217 >gi|218263372|ref|ZP_03477499.1| hypothetical protein PRABACTJOHN_03185 [Parabacteroides johnsonii DSM 18315] gi|218222780|gb|EEC95430.1| hypothetical protein PRABACTJOHN_03185 [Parabacteroides johnsonii DSM 18315] Length = 190 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + ++K N ++ S G ++ IR I+Q + +A++IIL HNHPSGN PS D Sbjct: 94 ILMNKANKVLGICPISEGGLNETSADIRIIMQAAILGNASAIILAHNHPSGNIQPSMQDD 153 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + T + I + DH+II + + S+ I Sbjct: 154 QVTKRVKETAKLIGINLLDHLIITDETYYSYSENGRI 190 >gi|309800342|ref|ZP_07694510.1| DNA repair protein RadC [Streptococcus infantis SK1302] gi|308116029|gb|EFO53537.1| DNA repair protein RadC [Streptococcus infantis SK1302] Length = 175 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 50/94 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ L+ ATS+ILVHNHPSG PS D Sbjct: 78 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVMPSRNDD 137 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + +++ DH+I+ + S++ Sbjct: 138 HVTKLVKEACELMGLVLLDHLIVSHSDYFSYREK 171 >gi|315613236|ref|ZP_07888146.1| DNA repair protein RadC [Streptococcus sanguinis ATCC 49296] gi|315314798|gb|EFU62840.1| DNA repair protein RadC [Streptococcus sanguinis ATCC 49296] Length = 226 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 50/94 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ L+ ATS+ILVHNHPSG +PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVSPSRNDN 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + I+ DH+I+ + S++ Sbjct: 189 HVTKLVKEACELMGIVFLDHLIVSHSDYFSYREK 222 >gi|116516612|ref|YP_816450.1| DNA repair protein RadC [Streptococcus pneumoniae D39] gi|39931955|sp|Q8DPU7|Y996_STRR6 RecName: Full=UPF0758 protein spr0996 gi|122278664|sp|Q04KJ8|Y975_STRP2 RecName: Full=UPF0758 protein SPD_0975 gi|116077188|gb|ABJ54908.1| DNA repair protein RadC [Streptococcus pneumoniae D39] Length = 226 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G++ REI+ ++ ATS++LVHNHPSG PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLVLVHNHPSGAVAPSQNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + I++ DH+I+ + S++ Sbjct: 189 HVTKLVKEACELMGIVLLDHLIVSHSNYFSYREK 222 >gi|302875597|ref|YP_003844230.1| DNA repair protein RadC [Clostridium cellulovorans 743B] gi|307690127|ref|ZP_07632573.1| DNA repair protein RadC [Clostridium cellulovorans 743B] gi|302578454|gb|ADL52466.1| DNA repair protein RadC [Clostridium cellulovorans 743B] Length = 228 Score = 113 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N ++ + S G+++ V+ RE+ ++ + SII+ HNHPSG+P PS DI Sbjct: 132 IMLNVKNFVVKIKDVSMGSLNSSIVHPREVFVDAIKEGSASIIICHNHPSGDPTPSKEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + + I + DHII+G +VS K ++ Sbjct: 192 NITLRLKEASKIIGIDLLDHIIVGNGTYVSLKEKDVL 228 >gi|238927763|ref|ZP_04659523.1| DNA repair protein RadC [Selenomonas flueggei ATCC 43531] gi|238884479|gb|EEQ48117.1| DNA repair protein RadC [Selenomonas flueggei ATCC 43531] Length = 225 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 52/95 (54%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L N ++ S GT+ + V+ RE+ + + SA II+ HNHPSG+P PS D + Sbjct: 131 LSAKNEVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDPAPSAEDHRL 190 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+++ L I V DH+I+ +D F SF ++ Sbjct: 191 TRSLHEAGALLGIPVADHVIVARDGFFSFAEAGLL 225 >gi|189467426|ref|ZP_03016211.1| hypothetical protein BACINT_03814 [Bacteroides intestinalis DSM 17393] gi|189435690|gb|EDV04675.1| hypothetical protein BACINT_03814 [Bacteroides intestinalis DSM 17393] Length = 150 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ N + + S+G + + ++ I+Q L++ A+ IIL HNHPSGN PS+ D Sbjct: 54 MFLNRANKALGVSLISKGGMAETVMDVKIILQTALKVHASGIILSHNHPSGNLRPSEPDK 113 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L++ + DHII+ ++++ SF ++ Sbjct: 114 QITSKIKEACKVLDLHLLDHIILTEESYYSFADEGLL 150 >gi|322411656|gb|EFY02564.1| DNA repair protein RadC [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 226 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N +I ++ GT+ REI+ + ATS+I+VHNHPSG+ +PS D Sbjct: 129 LYLDSQNRVIEEKTIFIGTVRRSIAEPREILYYACKNMATSLIVVHNHPSGSIDPSPNDY 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + + II DHII+ ++ SF+ Sbjct: 189 AFTEKIKRSCEDIGIICLDHIIVSYQSYYSFREK 222 >gi|255015601|ref|ZP_05287727.1| putative DNA repair protein [Bacteroides sp. 2_1_7] Length = 220 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ + LI S G I+ PV IR I+++ L +A S I+VHNHPSG PS AD Sbjct: 121 LLLNSSSKLIRKVRISCGEINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADD 180 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+I + DH+I+ + + S+ + Sbjct: 181 RLTEAVKKAAETLDIRLLDHVIVAGNIYYSYADEGRL 217 >gi|161507304|ref|YP_001577258.1| DNA repair protein RadC [Lactobacillus helveticus DPC 4571] gi|260102644|ref|ZP_05752881.1| DNA repair protein [Lactobacillus helveticus DSM 20075] gi|160348293|gb|ABX26967.1| DNA repair protein RadC [Lactobacillus helveticus DPC 4571] gi|260083549|gb|EEW67669.1| DNA repair protein [Lactobacillus helveticus DSM 20075] gi|323466816|gb|ADX70503.1| DNA repair protein RadC [Lactobacillus helveticus H10] Length = 207 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 52/96 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L++D N ++A++ +GT++ + REI + + + I + HNHPSG PS D Sbjct: 111 LYVDNGNRIVAEKKIFQGTLNKSVAHPREIFRWAVIYDCSGIFIAHNHPSGKLIPSSNDF 170 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+++ + I + DH I+G+ ++S + + Sbjct: 171 ELTKDLYRAAKMMKIDLLDHFIVGQGQYLSMREKEL 206 >gi|147678792|ref|YP_001213007.1| DNA repair protein [Pelotomaculum thermopropionicum SI] gi|146274889|dbj|BAF60638.1| hypothetical DNA repair proteins [Pelotomaculum thermopropionicum SI] Length = 140 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N A + GT++ V+ RE+ + L ++ IIL HNHPSG+P PS DI Sbjct: 43 ICLNTRNEPTAVHTVAVGTLNSSQVHPREVFKVALLANSAGIILAHNHPSGDPAPSREDI 102 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 +T+ + + L I V DHI+IG + S +I Sbjct: 103 EITRRLKECGDLLGISVLDHIVIGSGGQYTSLLQKLLI 140 >gi|322391926|ref|ZP_08065390.1| DNA repair protein RadC [Streptococcus peroris ATCC 700780] gi|321145152|gb|EFX40549.1| DNA repair protein RadC [Streptococcus peroris ATCC 700780] Length = 226 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ L+ ATS+ILVHNHPSG +PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVSPSPNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + +++ DH+I+ + S++ Sbjct: 189 HVTKLVKEACELMGLVLLDHLIVSHSDYFSYREK 222 >gi|268323410|emb|CBH36998.1| probable DNA repair protein radC homolog [uncultured archaeon] gi|268324046|emb|CBH37634.1| putative DNA repair protein radC [uncultured archaeon] Length = 152 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 55/95 (57%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +I + V + G ++ V+ RE+ + A SIILVHNHPSG+ PS D+ + Sbjct: 58 LNGANEVIGNRVVTVGLLNSNQVHPREVFSNPIVDRAASIILVHNHPSGDTEPSPEDVAI 117 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ L I +HDH+I+ K+ + S K +I Sbjct: 118 TKRLVEAGELLGIKIHDHVIVSKNGYTSMKERGVI 152 >gi|186686420|ref|YP_001869616.1| DNA repair protein RadC [Nostoc punctiforme PCC 73102] gi|229470321|sp|B2IY74|Y6401_NOSP7 RecName: Full=UPF0758 protein Npun_R6401 gi|186468872|gb|ACC84673.1| DNA repair protein RadC [Nostoc punctiforme PCC 73102] Length = 243 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 47/93 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N L+ +V + GT R+I + + AT I+ HNHPSGN PS DI Sbjct: 139 VLLDVKNRLLGTQVITIGTATETLASPRDIFREVIRQGATRAIVAHNHPSGNLEPSQEDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 +T+ ++ L I V DH+I+G S + Sbjct: 199 ELTRQLLAGAQLLGIPVLDHLILGNGNHQSLRE 231 >gi|224024589|ref|ZP_03642955.1| hypothetical protein BACCOPRO_01315 [Bacteroides coprophilus DSM 18228] gi|224017811|gb|EEF75823.1| hypothetical protein BACCOPRO_01315 [Bacteroides coprophilus DSM 18228] Length = 230 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ + LI S+G + V +R I++ L AT+++L HNHPSGN PS D Sbjct: 134 MLLNQASRLIDALRISQGGLASTQVDVRCILREALLKRATALVLCHNHPSGNTRPSTDDD 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + +NI + DH+I+ + S+ + Sbjct: 194 RLTQALSQAAKVMNIRMLDHLIVSDGGYYSYADEGRL 230 >gi|138898342|ref|YP_001127527.1| DNA repair protein RadC [Geobacillus thermodenitrificans NG80-2] gi|134268588|gb|ABO68782.1| DNA repair protein RadC [Geobacillus thermodenitrificans NG80-2] Length = 126 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N ++A G+++ V+ RE+ + + +A SII+ H HPSG+ PS D+ Sbjct: 28 MCLNTKNEVVAVHRCHIGSLNASIVHPREVFKAAILNNAASIIVAHQHPSGDVTPSKEDV 87 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRI 96 MT+ + L I V DH++I K + S K Sbjct: 88 EMTKRLAEAGRILGIEVLDHLVINYKAEYTSLKERGF 124 >gi|29348394|ref|NP_811897.1| DNA repair protein [Bacteroides thetaiotaomicron VPI-5482] gi|29340298|gb|AAO78091.1| DNA repair protein [Bacteroides thetaiotaomicron VPI-5482] Length = 148 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 51/95 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ + ++ + S G I V +R I+Q L ++ +IIL HNHPSG+ PS D+ Sbjct: 52 LFLNQASQVLGYTLISEGGITDTTVDVRVILQAALLTNSVAIILAHNHPSGSMKPSRQDM 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + + I V DH+I+ + SF Sbjct: 112 EITKQVKEAARLMRITVTDHLILTDAGYYSFADEG 146 >gi|284036885|ref|YP_003386815.1| DNA repair protein RadC [Spirosoma linguale DSM 74] gi|283816178|gb|ADB38016.1| DNA repair protein RadC [Spirosoma linguale DSM 74] Length = 157 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD+ N +A + G + I L+ AT IIL HNHPSGN PS+AD Sbjct: 59 LLLDQQNNCLAVSEIATGGTSACLADPKVIFATALKTRATGIILAHNHPSGNLAPSEADK 118 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L+I V DH+I+ + SF ++ Sbjct: 119 SLTRKLKDGGKLLDIAVLDHLIVTSHNYRSFADDGLM 155 >gi|15903040|ref|NP_358590.1| DNA repair protein RadC [Streptococcus pneumoniae R6] gi|15458611|gb|AAK99800.1| DNA repair protein [Streptococcus pneumoniae R6] Length = 231 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G++ REI+ ++ ATS++LVHNHPSG PS D Sbjct: 134 LYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLVLVHNHPSGAVAPSQNDD 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + I++ DH+I+ + S++ Sbjct: 194 HVTKLVKEACELMGIVLLDHLIVSHSNYFSYREK 227 >gi|189467519|ref|ZP_03016304.1| hypothetical protein BACINT_03909 [Bacteroides intestinalis DSM 17393] gi|189435783|gb|EDV04768.1| hypothetical protein BACINT_03909 [Bacteroides intestinalis DSM 17393] Length = 148 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 50/95 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ + ++ + S G I +R I+Q L ++ +IIL HNHPSG+ PS DI Sbjct: 52 LFLNQASQILGYTLISEGGITETCADVRVILQAALLTNSVAIILAHNHPSGSMKPSRQDI 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + + I V DH+I+ + SF Sbjct: 112 EITKQVKDAARLMRITVTDHLILTDAGYYSFADEG 146 >gi|312621801|ref|YP_004023414.1| DNA repair protein radc [Caldicellulosiruptor kronotskyensis 2002] gi|312202268|gb|ADQ45595.1| DNA repair protein RadC [Caldicellulosiruptor kronotskyensis 2002] Length = 163 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD L A SRGT++ P REI +R L + SII+ HNHP G+ PS DI Sbjct: 67 LCLDVQLNLNAIFEVSRGTLNFAPANTREIFKRVLLTNCHSIIIAHNHPGGSAKPSMDDI 126 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + T+ I L+I ++DHIII +D++ SF I+ Sbjct: 127 DTTKKIKEAAQLLDIRLNDHIIIAEDSYYSFSQAGIL 163 >gi|237722358|ref|ZP_04552839.1| DNA repair protein [Bacteroides sp. 2_2_4] gi|229448168|gb|EEO53959.1| DNA repair protein [Bacteroides sp. 2_2_4] Length = 151 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 49/95 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ ++ + S G I IR I+Q L ++ +IIL HNHPSGN PS D+ Sbjct: 55 LFLNQAKQVLGYTLISEGGITETCADIRVILQAALLTNSVAIILAHNHPSGNLKPSRQDM 114 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + + I V DH+I+ + SF Sbjct: 115 EITKQVKNAAQLMRITVLDHLILTDAGYYSFSDEG 149 >gi|325106478|ref|YP_004276132.1| DNA replication and repair protein RadC [Pedobacter saltans DSM 12145] gi|324975326|gb|ADY54310.1| DNA replication and repair protein RadC [Pedobacter saltans DSM 12145] Length = 234 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ N +++ + S+G + I + LE +A+SI+L HNHPSGN PS AD+ Sbjct: 138 VLLNRTNRVLSKVLISKGGQSATVSDPKIIFKSALEHNASSIVLAHNHPSGNLKPSSADL 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L+I V DH+I + + SF ++ Sbjct: 198 QLTKKMVEGGKILDIGVLDHLIFAERKYFSFADEGLM 234 >gi|257413989|ref|ZP_04744897.2| DNA repair protein RadC [Roseburia intestinalis L1-82] gi|257201600|gb|EEU99884.1| DNA repair protein RadC [Roseburia intestinalis L1-82] gi|291536173|emb|CBL09285.1| DNA replication and repair protein RadC [Roseburia intestinalis M50/1] gi|291538964|emb|CBL12075.1| DNA replication and repair protein RadC [Roseburia intestinalis XB6B4] Length = 243 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 51/96 (53%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 D + D++ S G+ + V RE+ + + A +ILVHNHPSG P PS AD Sbjct: 146 MFDNKCHMKGDKLLSVGSANETIVSPREVFETAINCHAAHLILVHNHPSGIPEPSHADDV 205 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ + I + DH+IIG ++ S++ I Sbjct: 206 VTKRILNCGQLMGIPLSDHVIIGDHSYFSYRENNRI 241 >gi|6958313|gb|AAF32528.1|AF135191_1 RadC [Bacillus sp. NEB-606] Length = 119 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N A + G+++ V+ RE+++ + ++ S+I+ HNHPS +P PS DI Sbjct: 23 ICLDTKNQPTAINICHVGSLNASLVHPREVMKPAILSNSASVIVAHNHPSLDPTPSKEDI 82 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ +I + I + DHI++G + +VS K R I Sbjct: 83 NVTKRLIEAGRIMGIDILDHIVVGGNKYVSLKEKRYI 119 >gi|309385827|gb|ADO66756.1| putative DNA repair protein RadC [Enterococcus faecium] Length = 147 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N ++A G+++ V+ RE+ + + +A S+I+ H HPS + PS DI Sbjct: 50 MCLNTRNNVVAVHRCHVGSLNASLVHPREVFKSAILNNAASVIVAHQHPSDDITPSKEDI 109 Query: 61 NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97 N+T+ ++ L I V DH+++ + F S K I Sbjct: 110 NVTKRLVEAGKLLGIEVLDHLVVNSDNGFTSLKERGYI 147 >gi|218245274|ref|YP_002370645.1| DNA repair protein RadC [Cyanothece sp. PCC 8801] gi|257058307|ref|YP_003136195.1| DNA repair protein RadC [Cyanothece sp. PCC 8802] gi|218165752|gb|ACK64489.1| DNA repair protein RadC [Cyanothece sp. PCC 8801] gi|256588473|gb|ACU99359.1| DNA repair protein RadC [Cyanothece sp. PCC 8802] Length = 243 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 57/93 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N LI ++ + GT V+ R+I + L+ AT +I+ HNHPSG+ +PS D+ Sbjct: 139 VFLDVKNRLIGTKIITIGTATETLVHPRDIFRETLKQGATRLIVAHNHPSGSLDPSSEDL 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 ++T+ ++ N L I + DH+I+G+ + S + Sbjct: 199 DLTEQLLEGANYLGIPLLDHLILGEGDYQSLRQ 231 >gi|308272571|emb|CBX29175.1| DNA repair protein radC homolog [uncultured Desulfobacterium sp.] Length = 233 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ + +I + GT++H +REI+ L+ TSII +HNHPS N PS D Sbjct: 136 VYLNSDSRIIDISDAAIGTVNHAIPIVREIIHAALQKFTTSIICIHNHPSANLTPSHEDK 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + ++I V DHIIIG D++ SF ++ Sbjct: 196 KFAAKLTDAGKLMDIKVLDHIIIGDDSYYSFAEHGLM 232 >gi|160885503|ref|ZP_02066506.1| hypothetical protein BACOVA_03503 [Bacteroides ovatus ATCC 8483] gi|260172176|ref|ZP_05758588.1| putative DNA repair protein [Bacteroides sp. D2] gi|293371841|ref|ZP_06618250.1| DNA repair protein RadC [Bacteroides ovatus SD CMC 3f] gi|299147358|ref|ZP_07040423.1| DNA repair protein RadC [Bacteroides sp. 3_1_23] gi|315920484|ref|ZP_07916724.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156109125|gb|EDO10870.1| hypothetical protein BACOVA_03503 [Bacteroides ovatus ATCC 8483] gi|292633185|gb|EFF51757.1| DNA repair protein RadC [Bacteroides ovatus SD CMC 3f] gi|298514636|gb|EFI38520.1| DNA repair protein RadC [Bacteroides sp. 3_1_23] gi|313694359|gb|EFS31194.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 231 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ LI S G ID +R I++ L AT I +VHNHPSGN +PS D Sbjct: 135 LLLNQATKLIDKVRISTGGIDGTYTDVRTILREALLQRATQIAVVHNHPSGNIHPSQPDR 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T++I +NI + DH+I+ +D F SF ++ Sbjct: 195 SLTEHIHKAAETMNIRLIDHVIVCEDGFFSFADEGLL 231 >gi|327405127|ref|YP_004345965.1| DNA repair protein RadC [Fluviicola taffensis DSM 16823] gi|327320635|gb|AEA45127.1| DNA repair protein RadC [Fluviicola taffensis DSM 16823] Length = 230 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ + S G I V + I + ++LSA IIL HNHPSG PSD D Sbjct: 134 LYLNNSNEILQVKQLSIGGITGTFVDPKIIFKHGIDLSACGIILAHNHPSGILIPSDQDK 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I + + V DH+II + + SF ++ Sbjct: 194 RLTKRIQQFGMLIEMNVIDHLIITDNGYFSFADQNLL 230 >gi|167764281|ref|ZP_02436408.1| hypothetical protein BACSTE_02666 [Bacteroides stercoris ATCC 43183] gi|167698397|gb|EDS14976.1| hypothetical protein BACSTE_02666 [Bacteroides stercoris ATCC 43183] Length = 237 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ + +I SRG ID +R I++ L AT I L+HNHPSGNP PS D Sbjct: 141 LLLNQASRVIDKVRISRGGIDQTSADVRSILREALLQRATQIALIHNHPSGNPQPSTNDR 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I+ +NI + DH+I+ + SF ++ Sbjct: 201 QLTQLILKGAQTMNIRLIDHVIVTDGRYYSFTDEGVL 237 >gi|116493037|ref|YP_804772.1| DNA repair protein [Pediococcus pentosaceus ATCC 25745] gi|116103187|gb|ABJ68330.1| DNA replication and repair protein RadC [Pediococcus pentosaceus ATCC 25745] Length = 219 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N + + V +G ++ V+ REI+ L +SA S +L+HNHPSGN PS D+ Sbjct: 123 LCLDTKNQIKREIVVFKGGLNSAEVHPREIMVEVLRVSANSFVLIHNHPSGNIEPSTNDL 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + + I + DH+I+G ++ S R I Sbjct: 183 AFTKKMKKVGDLMGIRLIDHLIVGDQSYWSAAEKRFI 219 >gi|305665155|ref|YP_003861442.1| putative DNA repair protein [Maribacter sp. HTCC2170] gi|88709907|gb|EAR02139.1| putative DNA repair protein [Maribacter sp. HTCC2170] Length = 232 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I S+G I V +R ++++ LEL A ++L HNHPSG PS+AD Sbjct: 136 VYLNNSNKVIHTSQLSKGGITGTLVDVRLVMKKALELGAIGLVLAHNHPSGGLKPSNADK 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L++ V DH+II ++ + SF I+ Sbjct: 196 QITSKLKNAALALDLKVLDHLIITQNDYFSFADESIL 232 >gi|146302122|ref|YP_001196713.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101] gi|146156540|gb|ABQ07394.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101] Length = 156 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L + N ++ S G I V +R + L+ +A II+ HNHPSG +PS+AD Sbjct: 60 LLLSQSNRVLGIYEVSSGGISGTLVDMRMLFAAALKAAAVGIIITHNHPSGKTSPSEADR 119 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 NMT+ I L+I + DH+I+ + + SF + Sbjct: 120 NMTRKIREAGKLLDIPLLDHLIVTPETYYSFADEGAL 156 >gi|239637541|ref|ZP_04678513.1| DNA repair protein RadC [Staphylococcus warneri L37603] gi|239596759|gb|EEQ79284.1| DNA repair protein RadC [Staphylococcus warneri L37603] Length = 227 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+I + GT++ ++ REI ++ S S+I+VHNHPSG+ PS+ DI Sbjct: 128 LLLNSKNIVIKQQCVFVGTLNSSIIHPREIFNVAIKESCNSMIVVHNHPSGDVTPSEEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 N T + + L I V DHIIIG + F S Sbjct: 188 NTTIRLRDCVMILGINVLDHIIIGDNQFTSLVECGY 223 >gi|295135718|ref|YP_003586394.1| DNA repair protein RadC [Zunongwangia profunda SM-A87] gi|294983733|gb|ADF54198.1| DNA repair protein RadC [Zunongwangia profunda SM-A87] Length = 232 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ N +I S+G I V +R +++ LEL A +IIL HNHPSG PS AD Sbjct: 136 IYLNNSNKVIDKLQLSKGGITGTLVDVRLTMKKALELGAVAIILAHNHPSGTLKPSIADK 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+TQ + L+I V DHII+ + ++ SF I+ Sbjct: 196 NLTQKLKIASESLDIKVLDHIIVTEMSYFSFADEAIL 232 >gi|255319392|ref|ZP_05360608.1| DNA repair protein RadC [Acinetobacter radioresistens SK82] gi|262380856|ref|ZP_06074007.1| DNA repair protein radC [Acinetobacter radioresistens SH164] gi|255303528|gb|EET82729.1| DNA repair protein RadC [Acinetobacter radioresistens SK82] gi|262297491|gb|EEY85409.1| DNA repair protein radC [Acinetobacter radioresistens SH164] Length = 241 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 49/96 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD ++ + G+++H V I +I++ L+ A +++ HNHP G PS AD+ Sbjct: 131 LCLDNDLRKLSFKKLFFGSLNHCAVSINQILRYALKQHACHLVIAHNHPFGQAQPSPADL 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + + I++ DH II + SF + Sbjct: 191 ELTRQLSQACKLVEIVLLDHFIISPECSFSFAEQGL 226 >gi|94498367|ref|ZP_01304925.1| hypothetical protein SKA58_11765 [Sphingomonas sp. SKA58] gi|94422122|gb|EAT07165.1| hypothetical protein SKA58_11765 [Sphingomonas sp. SKA58] Length = 231 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 64/97 (65%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N+LI D+ G+ID +Y RE+++R ++L + ++ILVHNHPSG+P+PS DI Sbjct: 135 LHLNSRNMLIRDDHMGDGSIDQAAIYTREVIRRAIDLGSAALILVHNHPSGDPSPSRQDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ II LNI VHDH+II VS + ++ Sbjct: 195 DVTRQIIDAGKRLNISVHDHVIIAGQGHVSLRAKGLL 231 >gi|160902910|ref|YP_001568491.1| DNA repair protein RadC [Petrotoga mobilis SJ95] gi|160360554|gb|ABX32168.1| DNA repair protein RadC [Petrotoga mobilis SJ95] Length = 222 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 38/91 (41%), Positives = 58/91 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD +I + S GT++ + R+I + + +A S ILVHNHPSG+P PS D Sbjct: 123 IFLDSKLHIITIKDISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNHPSGDPTPSMHDR 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91 ++T+ I+ + L I ++DHIIIGKD++ SF Sbjct: 183 DITKKIMDSGEILGINMNDHIIIGKDSYFSF 213 >gi|260171158|ref|ZP_05757570.1| putative DNA repair protein [Bacteroides sp. D2] gi|315919475|ref|ZP_07915715.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313693350|gb|EFS30185.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 150 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ N + + S+G + + ++ I+Q L++ A+ IIL HNHPSGN PS+ D Sbjct: 54 MFLNRANKALGVSLISKGGMAETVMDVKIILQTALKVHASGIILSHNHPSGNLRPSEPDK 113 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L++ + DHII+ ++++ SF +I Sbjct: 114 QITSKIKEACKVLDLHLFDHIILTEESYYSFADEGLI 150 >gi|99034812|ref|ZP_01314730.1| hypothetical protein Wendoof_01000450 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 116 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 69/97 (71%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++++K LIA+++++ GT+D P+Y+REI++R L + +TSI++ HNHPSG+ PS++DI Sbjct: 20 IYMNKKYRLIAEDLENIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSGDTQPSNSDI 79 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I + DHIII ++ SFK R++ Sbjct: 80 SLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 116 >gi|157363305|ref|YP_001470072.1| DNA repair protein RadC [Thermotoga lettingae TMO] gi|157313909|gb|ABV33008.1| DNA repair protein RadC [Thermotoga lettingae TMO] Length = 225 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + + ++GT + + REI + + +ATSII+VHNHPSG+P+PS D Sbjct: 119 ILLDSKLFSVFHKDITQGTNNQTIFHPREIFRIAIRSNATSIIVVHNHPSGDPSPSAEDK 178 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ +I+ + L I + DH+I+G++ + SF+ R++ Sbjct: 179 KATEMLISAGDILGIEIIDHLIVGRERYYSFRENRLL 215 >gi|322376781|ref|ZP_08051274.1| DNA repair protein RadC [Streptococcus sp. M334] gi|321282588|gb|EFX59595.1| DNA repair protein RadC [Streptococcus sp. M334] Length = 226 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ ++ ATS+ILVHNHPSG PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSRNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + + I++ DH+I+ ++ S++ Sbjct: 189 HVTKLVKEACDLMGIVLLDHLIVSHSSYFSYREK 222 >gi|258647040|ref|ZP_05734509.1| DNA repair protein RadC [Prevotella tannerae ATCC 51259] gi|260853150|gb|EEX73019.1| DNA repair protein RadC [Prevotella tannerae ATCC 51259] Length = 228 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ L+++ + RG + V +R + + LE AT++ + HNHPSGNP PS AD Sbjct: 131 MFLNRRLQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPRPSQADD 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L+I + DHII+ + S++ + Sbjct: 191 RLTQKVAQAARLLDIRLVDHIIVADKCYYSYQEEGKL 227 >gi|307704752|ref|ZP_07641648.1| DNA repair protein radC [Streptococcus mitis SK597] gi|307708771|ref|ZP_07645233.1| DNA repair protein RadC [Streptococcus mitis NCTC 12261] gi|307615137|gb|EFN94348.1| DNA repair protein RadC [Streptococcus mitis NCTC 12261] gi|307621661|gb|EFO00702.1| DNA repair protein radC [Streptococcus mitis SK597] Length = 226 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ ++ ATS+ILVHNHPSG PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSRNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + + I++ DH+I+ ++ S++ Sbjct: 189 HVTKLVKEACDLMGIVLLDHLIVSHSSYFSYREK 222 >gi|329954654|ref|ZP_08295714.1| DNA repair protein RadC [Bacteroides clarus YIT 12056] gi|328527195|gb|EGF54199.1| DNA repair protein RadC [Bacteroides clarus YIT 12056] Length = 148 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ ++ S G + +R I+Q L +AT+IIL HNHPSG PS DI Sbjct: 52 VLLNQAQEVLGYTQISEGGLTETSADVRIILQAALLTNATAIILAHNHPSGKLRPSQQDI 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I V DHII+ D++ SF + Sbjct: 112 ALTEQVKKAAEIMRITVIDHIILTDDSYYSFADEGQL 148 >gi|260427275|ref|ZP_05781254.1| DNA repair protein RadC [Citreicella sp. SE45] gi|260421767|gb|EEX15018.1| DNA repair protein RadC [Citreicella sp. SE45] Length = 139 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 45/95 (47%), Positives = 66/95 (69%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N LI+DE + GT+DHVPVY RE+++RCL L+A+++I+VHNH +G+P PS AD+ Sbjct: 43 LYLDRRNRLISDECLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHSAGDPEPSAADL 102 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 MT+ + L +I+HDHII G S + Sbjct: 103 EMTKEVQIACASLGVILHDHIITGAGRETSLRARG 137 >gi|110637561|ref|YP_677768.1| DNA repair protein [Cytophaga hutchinsonii ATCC 33406] gi|110280242|gb|ABG58428.1| DNA replication and repair protein RadC [Cytophaga hutchinsonii ATCC 33406] Length = 233 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N + S G + + I + LE A+SIILVHNHPSGN PS+AD Sbjct: 137 LLLNRANRIEKKIRISTGGVSGTVADPKLIYKYALENLASSIILVHNHPSGNTKPSEADY 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L V DH+II + SF I Sbjct: 197 SLTKKLCEAGTFLETPVLDHVIICNHTWYSFADEGKI 233 >gi|213019650|ref|ZP_03335455.1| DNA repair protein RadC [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994691|gb|EEB55334.1| DNA repair protein RadC [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 118 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 67/97 (69%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++++K LIA+++Q+ GT+D P+Y+REI++R L + +TSI++ HNHPSG+ PS +D+ Sbjct: 20 IYMNKRYRLIAEDLQNFGTVDQTPIYVREIIRRALLIGSTSIVISHNHPSGDIQPSSSDM 79 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I + DHIII ++ SFK R++ Sbjct: 80 FLTRQLAEACKSIGIELIDHIIITFSSYFSFKENRLL 116 >gi|206972327|ref|ZP_03233273.1| DNA repair protein radc [Bacillus cereus AH1134] gi|206732652|gb|EDZ49828.1| DNA repair protein radc [Bacillus cereus AH1134] Length = 146 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +IA G I+ V+ RE + CL +A S+I HNHPS + PSD D+ Sbjct: 50 ICLNTKNEVIAVHRIHVGAINASIVHPREAYKVCLLYNACSVIFFHNHPSYDTTPSDEDL 109 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I + DHII+ F S K + Sbjct: 110 EVTRRLKEAGQILGIEMLDHIIVSPKGFTSLKVKGKL 146 >gi|312128297|ref|YP_003993171.1| DNA repair protein radc [Caldicellulosiruptor hydrothermalis 108] gi|311778316|gb|ADQ07802.1| DNA repair protein RadC [Caldicellulosiruptor hydrothermalis 108] Length = 230 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD +I GT+ VY R++V+ + +A+S+IL HNHP G+ PS DI Sbjct: 129 ICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECAIRYNASSVILAHNHPGGSVRPSMDDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 TQ I+ L+ + + V+DH I+ KD + SF ++ Sbjct: 189 KTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 225 >gi|53711774|ref|YP_097766.1| putative DNA repair protein [Bacteroides fragilis YCH46] gi|52214639|dbj|BAD47232.1| putative DNA repair protein [Bacteroides fragilis YCH46] Length = 230 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ +I S G ID +R I++ L AT I L+HNHPSGN PS D Sbjct: 134 LLLNQACKVINKLRISTGGIDGTYADVRTILREALIGRATQIALIHNHPSGNAKPSQEDK 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I +NI + DH+I+ F SF +I Sbjct: 194 RLTGAIQKASQTMNITLVDHVIVCDGCFYSFADEGLI 230 >gi|330427436|gb|AEC18770.1| DNA repair protein RadC [Pusillimonas sp. T7-7] Length = 180 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 54/96 (56%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L+ LI RGT+ VY RE+V+ L +A ++I+ HNHPSG PS+AD Sbjct: 85 MLNAQYELIEYAEPFRGTLTQASVYPREVVKMALHANAAAVIIGHNHPSGALQPSEADKA 144 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ +L +++ + DHI++ + +SF ++ Sbjct: 145 LTAHLRQSLQLVDVSLLDHILVANNQTLSFAERGLL 180 >gi|255009935|ref|ZP_05282061.1| putative DNA repair protein [Bacteroides fragilis 3_1_12] gi|313147722|ref|ZP_07809915.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136489|gb|EFR53849.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 231 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ +I+ S G ID +R I++ L AT I L+HNHPSGN PS D Sbjct: 135 LLLNQACKVISKLRISTGGIDGTYADVRTILREALIGRATQIALIHNHPSGNAKPSQEDK 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I +NI + DHII+ F SF +I Sbjct: 195 RLTAAIQKASQTMNITLTDHIIVCDGCFYSFADEGLI 231 >gi|302670846|ref|YP_003830806.1| DNA repair protein RadC [Butyrivibrio proteoclasticus B316] gi|302395319|gb|ADL34224.1| DNA repair protein RadC [Butyrivibrio proteoclasticus B316] Length = 237 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD LI + + S GT++ + R++ R L+ A++IIL+HNHP+G+P+PS AD+ Sbjct: 139 LCLDNKLNLIEECLLSIGTVNSASLSPRDVFMRALKCGASNIILLHNHPTGDPSPSKADV 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I + L+I + DHIIIG ++ S + ++ Sbjct: 199 IVTNKISESGIMLDIRLQDHIIIGDRSYCSLREKDLL 235 >gi|29345488|ref|NP_808991.1| putative DNA repair protein [Bacteroides thetaiotaomicron VPI-5482] gi|29337380|gb|AAO75185.1| putative DNA repair protein [Bacteroides thetaiotaomicron VPI-5482] gi|295087240|emb|CBK68763.1| DNA repair proteins [Bacteroides xylanisolvens XB1A] Length = 150 Score = 112 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ N + + S+G + + ++ I+Q L++ A+ I+L HNHPSGN PS+ D Sbjct: 54 MFLNRANKALGISLISKGGMAETVMDVKIILQTALKVHASGIVLSHNHPSGNLRPSEPDK 113 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L++ + DHII+ ++++ SF ++ Sbjct: 114 KITTKINEACKVLDLHLLDHIILTEESYYSFADEGLL 150 >gi|317474392|ref|ZP_07933666.1| DNA repair protein [Bacteroides eggerthii 1_2_48FAA] gi|316909073|gb|EFV30753.1| DNA repair protein [Bacteroides eggerthii 1_2_48FAA] Length = 148 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ ++ S G I +R I+Q L +AT+IIL HNHPSG PS DI Sbjct: 52 VLLNQAQEVLGYTQISEGGITETSADVRIILQAALLTNATAIILAHNHPSGKLRPSRQDI 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I V DHII+ D++ SF + Sbjct: 112 ALTEQVKKAAEIMRITVIDHIILTDDSYYSFADEGQL 148 >gi|257880671|ref|ZP_05660324.1| DNA repair protein RadC [Enterococcus faecium 1,230,933] gi|257814899|gb|EEV43657.1| DNA repair protein RadC [Enterococcus faecium 1,230,933] Length = 147 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 1/96 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N ++A G+++ V+ RE+ + + +A SII+ H HPSG+ PS DI Sbjct: 50 MCLNTKNHVVAVHRCHVGSLNASIVHPREVFKSAILNNAASIIVAHQHPSGDITPSMEDI 109 Query: 61 NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLR 95 N+T+ ++ L I V DH+++ G F S K Sbjct: 110 NVTKRLVEAGKLLGIEVFDHLVVNGDSKFTSLKEKG 145 >gi|307709460|ref|ZP_07645917.1| DNA repair protein radC [Streptococcus mitis SK564] gi|307619774|gb|EFN98893.1| DNA repair protein radC [Streptococcus mitis SK564] Length = 226 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ ++ ATSIILVHNHPSG PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSIILVHNHPSGAVAPSRNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + + I++ DH+I+ ++ S++ Sbjct: 189 HVTKLVKEACDLMGIVLLDHLIVSYSSYFSYREK 222 >gi|291514569|emb|CBK63779.1| DNA repair protein radc [Alistipes shahii WAL 8301] Length = 212 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N +I S+G + V R IV+R LEL AT +ILVHNHPSG P S D Sbjct: 114 VYLTSSNRVIERYRISQGGVTGTVVDHRLIVKRALELLATQLILVHNHPSGTPEASGQDK 173 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + +I + DHIII +D SF ++ Sbjct: 174 TLTERVARAAALFDIRLLDHIIIARDGDFSFLREGLM 210 >gi|298481711|ref|ZP_06999902.1| DNA repair protein RadC [Bacteroides sp. D22] gi|298272252|gb|EFI13822.1| DNA repair protein RadC [Bacteroides sp. D22] Length = 231 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ LI S G ID +R I++ L AT I +VHNHPSGN PS D Sbjct: 135 LLLNQATKLIDKVRISTGGIDGTYTDVRTILREALLQRATQIAVVHNHPSGNIRPSQPDK 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++I + +NI + DH+++ +D F SF ++ Sbjct: 195 TLTEHIRKAADTMNIHLIDHVVVCEDGFFSFADEGLL 231 >gi|306825148|ref|ZP_07458490.1| DNA repair protein RadC [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432584|gb|EFM35558.1| DNA repair protein RadC [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 197 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 50/94 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ L+ ATS+ILVHNHPSG +PS D Sbjct: 100 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKNMATSVILVHNHPSGAVSPSRNDD 159 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + I+ DH+I+ + S++ Sbjct: 160 HVTKLVKEACELMGIVFLDHLIVSHSDYFSYREK 193 >gi|281357981|ref|ZP_06244466.1| DNA repair protein RadC [Victivallis vadensis ATCC BAA-548] gi|281315639|gb|EFA99667.1| DNA repair protein RadC [Victivallis vadensis ATCC BAA-548] Length = 227 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N L+ +V GT+D VY RE++++ + AT++IL HNHP+G PS ADI Sbjct: 132 LFLNAQNHLLCFDVIP-GTVDRATVYAREVLEKAINTKATAVILAHNHPTGICEPSPADI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L P+ I++HDHII+ + SF R++ Sbjct: 191 KLTNTIRQVLQPVGILLHDHIIVAPSCYFSFASRRML 227 >gi|289168032|ref|YP_003446301.1| DNA repair protein RadC [Streptococcus mitis B6] gi|288907599|emb|CBJ22436.1| DNA repair protein RadC [Streptococcus mitis B6] Length = 226 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ ++ ATS+ILVHNHPSG PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSRNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + + I++ DH+I+ + S++ Sbjct: 189 HVTKLVKEACDLMGIVLLDHLIVSHSNYFSYREK 222 >gi|255692445|ref|ZP_05416120.1| DNA repair protein RadC [Bacteroides finegoldii DSM 17565] gi|260621913|gb|EEX44784.1| DNA repair protein RadC [Bacteroides finegoldii DSM 17565] Length = 231 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ LI S G ID +R I++ L AT I +VHNHPSGN +PS D Sbjct: 135 LLLNQATKLIDKVRISTGGIDGTYTDVRMILREALLQRATQIAVVHNHPSGNIHPSQPDK 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++I + +NI + DH+I+ + F SF ++ Sbjct: 195 ILTEHIRKAADTMNIRLIDHVIVCESQFYSFADEGLL 231 >gi|196250833|ref|ZP_03149519.1| DNA repair protein RadC [Geobacillus sp. G11MC16] gi|196209671|gb|EDY04444.1| DNA repair protein RadC [Geobacillus sp. G11MC16] Length = 146 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N ++A G+++ V+ RE+ + + ++ SII+ H HPSG+ PS D+ Sbjct: 48 MCLNTKNEVVAVHRCHIGSLNASIVHPREVFKAAILNNSASIIVAHQHPSGDVTPSREDV 107 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRI 96 MT+ + L I V DH++I K + S K Sbjct: 108 EMTKRLAEAGRILGIEVLDHLVINYKAEYTSLKERGF 144 >gi|302338979|ref|YP_003804185.1| DNA repair protein RadC [Spirochaeta smaragdinae DSM 11293] gi|301636164|gb|ADK81591.1| DNA repair protein RadC [Spirochaeta smaragdinae DSM 11293] Length = 127 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 45/93 (48%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + + + + G + V+ RE+ + +A +II+ HNHPSG PS D + Sbjct: 33 LDGAHQVNGQHIVTIGLANRTLVHPREVFYPAIVDNAVAIIVAHNHPSGQILPSPEDEQI 92 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 TQ + L I V DHIIIG + SF Sbjct: 93 TQRLHDAGEILGIPVLDHIIIGNGRYYSFAEAG 125 >gi|213157928|ref|YP_002320726.1| DNA repair protein RadC [Acinetobacter baumannii AB0057] gi|215482288|ref|YP_002324470.1| DNA repair protein radC [Acinetobacter baumannii AB307-0294] gi|294839343|ref|ZP_06784026.1| DNA repair protein RadC [Acinetobacter sp. 6013113] gi|294857023|ref|ZP_06794792.1| DNA repair protein RadC [Acinetobacter sp. 6013150] gi|301347242|ref|ZP_07227983.1| DNA repair protein RadC [Acinetobacter baumannii AB056] gi|301511792|ref|ZP_07237029.1| DNA repair protein RadC [Acinetobacter baumannii AB058] gi|301595294|ref|ZP_07240302.1| DNA repair protein RadC [Acinetobacter baumannii AB059] gi|172044077|sp|A3M8S9|Y2918_ACIBT RecName: Full=UPF0758 protein A1S_2918 gi|226736613|sp|B7GWK9|Y545_ACIB3 RecName: Full=UPF0758 protein ABBFA_000545 gi|226736614|sp|B7I981|Y3420_ACIB5 RecName: Full=UPF0758 protein AB57_3420 gi|193078350|gb|ABO13323.2| DNA repair protein [Acinetobacter baumannii ATCC 17978] gi|213057088|gb|ACJ41990.1| DNA repair protein RadC [Acinetobacter baumannii AB0057] gi|213987913|gb|ACJ58212.1| DNA repair protein radC [Acinetobacter baumannii AB307-0294] Length = 235 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G++ H V + + ++ L+ A +++ HNHP G+P PS DI Sbjct: 131 LCLDAELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSPQPSPEDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I + DH II + SF +++ Sbjct: 191 KLTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 227 >gi|308270537|emb|CBX27149.1| DNA repair protein radC homolog [uncultured Desulfobacterium sp.] Length = 192 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 2/99 (2%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I + S GT+ V+ RE+++ + ++ ++IL HNHPS +P PS D+ Sbjct: 86 ILLNAKNGIIGLNIVSTGTLSSATVHPREVLKPAIIANSAAMILCHNHPSNDPTPSQEDL 145 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG--KDAFVSFKGLRII 97 +T+ I+ + I VH+H+II D + SF +I Sbjct: 146 AITRIIVQAAKIIGIHVHEHLIINMENDRYYSFADNGLI 184 >gi|315038037|ref|YP_004031605.1| DNA repair protein RadC [Lactobacillus amylovorus GRL 1112] gi|312276170|gb|ADQ58810.1| DNA repair protein RadC [Lactobacillus amylovorus GRL 1112] Length = 207 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L++D + +IA++ +GT++ + REI + + + I + HNHPSG PS +D Sbjct: 111 LYIDNASHIIAEKKLFQGTLNRSVAHPREIFRWAVIYGCSGIFIAHNHPSGKLMPSSSDF 170 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ + I DH I+G+ ++S + +++ Sbjct: 171 ELTEDLCQVAKMMKIDFLDHFIVGQGHYLSMREEKLV 207 >gi|195978173|ref|YP_002123417.1| DNA repair protein RadC [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|229485563|sp|B4U337|Y1052_STREM RecName: Full=UPF0758 protein Sez_1052 gi|195974878|gb|ACG62404.1| DNA repair protein RadC-like [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 225 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I ++ GT+ REI+ + ATS+I+VHNHPSG PS D Sbjct: 128 IYLDSQNKIIEEKTIFIGTVRKSIAEPREILYYACKNMATSLIVVHNHPSGLTKPSANDY 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 + T+ I + + L +I DHII+ K + SF+ Sbjct: 188 HFTEKIKRSCDYLGLICLDHIIVSKHGYYSFREK 221 >gi|224536395|ref|ZP_03676934.1| hypothetical protein BACCELL_01269 [Bacteroides cellulosilyticus DSM 14838] gi|224521987|gb|EEF91092.1| hypothetical protein BACCELL_01269 [Bacteroides cellulosilyticus DSM 14838] Length = 228 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ + +I SRG ID +R I++ L AT I L+HNHPSG+P PS D Sbjct: 132 LLLNQASRVIDKSRISRGGIDQTTADVRSILREALIQRATQIALIHNHPSGSPRPSTDDQ 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + +NI + DH+I+ + SF +I Sbjct: 192 RLTQLVQKGAQTMNIRLIDHVIVTDGKYYSFNDEGMI 228 >gi|282901217|ref|ZP_06309146.1| DNA repair protein RadC [Cylindrospermopsis raciborskii CS-505] gi|281193917|gb|EFA68885.1| DNA repair protein RadC [Cylindrospermopsis raciborskii CS-505] Length = 243 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 51/93 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N + ++ + GT R+I + + AT +I+ HNHPSGN PS ADI Sbjct: 139 LLLDVKNRFLGTKIITIGTATETLASPRDIFREVIRHGATRMIIAHNHPSGNLEPSQADI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 ++T+ +++ LNI + DH+I+G S + Sbjct: 199 DLTRQLLSGAQLLNIPILDHLILGNGNHQSLRE 231 >gi|71903481|ref|YP_280284.1| DNA repair protein RadC [Streptococcus pyogenes MGAS6180] gi|123639877|sp|Q48TN1|Y816_STRPM RecName: Full=UPF0758 protein M28_Spy0816 gi|71802576|gb|AAX71929.1| DNA repair protein [Streptococcus pyogenes MGAS6180] Length = 226 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 49/94 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N + ++ GT+ REI+ + ATS+I++HNHPSGN PS D Sbjct: 129 LYLDNQNRIFEEKTIFIGTVRRSLAEPREILYYACKNMATSLIVIHNHPSGNIEPSSNDY 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + L II DHII+ + SF+ Sbjct: 189 CFTEKIKRSCEDLGIICLDHIIVSYKDYYSFREK 222 >gi|260557106|ref|ZP_05829322.1| DNA repair protein radC [Acinetobacter baumannii ATCC 19606] gi|260409212|gb|EEX02514.1| DNA repair protein radC [Acinetobacter baumannii ATCC 19606] Length = 235 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G++ H V + + ++ L+ A +++ HNHP G+P PS DI Sbjct: 131 LCLDAELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSPQPSPEDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I + DH II + SF +++ Sbjct: 191 KLTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 227 >gi|126642941|ref|YP_001085925.1| DNA repair protein [Acinetobacter baumannii ATCC 17978] gi|169794701|ref|YP_001712494.1| DNA repair protein, associated with replication forks [Acinetobacter baumannii AYE] gi|169147628|emb|CAM85491.1| DNA repair protein, associated with replication forks [Acinetobacter baumannii AYE] Length = 250 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G++ H V + + ++ L+ A +++ HNHP G+P PS DI Sbjct: 146 LCLDAELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSPQPSPEDI 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I + DH II + SF +++ Sbjct: 206 KLTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 242 >gi|225868493|ref|YP_002744441.1| DNA repair protein RadC [Streptococcus equi subsp. zooepidemicus] gi|259551902|sp|C0MEY7|Y914_STRS7 RecName: Full=UPF0758 protein SZO_09140 gi|225701769|emb|CAW99162.1| DNA repair protein RadC [Streptococcus equi subsp. zooepidemicus] Length = 225 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I ++ GT+ REI+ + ATS+I+VHNHPSG PS D Sbjct: 128 IYLDSQNKIIEEKTIFIGTVRKSIAEPREILYYACKNMATSLIVVHNHPSGLTKPSANDY 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 + T+ I + + L +I DHII+ K + SF+ Sbjct: 188 HFTEKIKRSCDYLGLICLDHIIVSKHGYYSFREK 221 >gi|220916229|ref|YP_002491533.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-1] gi|219954083|gb|ACL64467.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-1] Length = 223 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 47/95 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD LI S G++ PV R++++ L + A +I HNHPSG+ +PS D Sbjct: 125 VLLDVRCRLIKTAKISEGSLTQCPVAPRDVLREALRVGAHGVIFAHNHPSGSADPSPEDH 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 ++T+ + + + DH+I+ + SF Sbjct: 185 DLTERLRAASELVGLTARDHLILASGGYYSFVEAG 219 >gi|187251767|ref|YP_001876249.1| DNA repair protein RadC [Elusimicrobium minutum Pei191] gi|186971927|gb|ACC98912.1| DNA repair protein RadC [Elusimicrobium minutum Pei191] Length = 228 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N +I EV S G ID + R++V+ L+ A I+LVHNHPSG+P+PS DI Sbjct: 132 IYLTVRNTVIGTEVLSVGAIDRASISPRKVVEGALKAKAVGIVLVHNHPSGDPSPSMEDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + T+ + L I+VHDHII+ + + S + I Sbjct: 192 SFTKEVAQAARILGIMVHDHIIVVRGGYYSMRAKSQI 228 >gi|329956074|ref|ZP_08296845.1| putative DNA repair protein RadC [Bacteroides clarus YIT 12056] gi|328524833|gb|EGF51887.1| putative DNA repair protein RadC [Bacteroides clarus YIT 12056] Length = 239 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ + +I SRG ID +R I++ L AT I L+HNHPSGNP+PS D Sbjct: 143 LLLNQASRVIDKVRISRGGIDQTSADVRSILREALLQRATQIALIHNHPSGNPHPSMNDR 202 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I +NI + DH+I+ + SF + Sbjct: 203 RLTQFIQKGAQTMNIRLIDHVIVTDGRYYSFNDEGAL 239 >gi|311748301|ref|ZP_07722086.1| DNA repair protein RadC [Algoriphagus sp. PR1] gi|126576798|gb|EAZ81046.1| DNA repair protein RadC [Algoriphagus sp. PR1] Length = 231 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L + N +I + S+G V + I + L+ A S+ILVHNHPSGN PS+ D Sbjct: 135 VLLSRSNQVIKKHLISKGGTAGTVVDSKLIFKSALDYLAQSMILVHNHPSGNLKPSEQDK 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L++ V DH+I + SF +I Sbjct: 195 RLTERLVKIGRELDLPVLDHVIFTDLGYFSFADEGLI 231 >gi|307706681|ref|ZP_07643487.1| DNA repair protein radC [Streptococcus mitis SK321] gi|307617925|gb|EFN97086.1| DNA repair protein radC [Streptococcus mitis SK321] Length = 226 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ ++ ATS+ILVHNHPSG PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSRNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + + I++ DH+I+ ++ S++ Sbjct: 189 HVTKLVKEACDLMGIVLLDHLIVSHSSYFSYREK 222 >gi|113868987|ref|YP_727476.1| DNA repair protein RadC [Ralstonia eutropha H16] gi|123133661|sp|Q0K7B3|Y3033_RALEH RecName: Full=UPF0758 protein H16_A3033 gi|113527763|emb|CAJ94108.1| DNA repair protein [Ralstonia eutropha H16] Length = 228 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 51/93 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N ++A E RGT+ VY RE+ ++ L +A II+ HNHP G PS +DI Sbjct: 128 LFLDPRNRMVASEEMFRGTLTRTAVYPREVARQALVHNAAGIIVAHNHPRGTTAPSQSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 +T + TL+ +++ + DH I+ S Sbjct: 188 RLTHELARTLDLIDVRLLDHFIVAGQEIRSLAD 220 >gi|237722533|ref|ZP_04553014.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229448343|gb|EEO54134.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 150 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ N + + S+G + + ++ I+Q L++ A+ IIL HNHPSGN PS+ D Sbjct: 54 MFLNRANKALGVSLISKGGMAETVMDVKIILQTALKVHASGIILSHNHPSGNLKPSEPDK 113 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L++++ DHII+ + + SF +I Sbjct: 114 QITSKIKEACKCLDLVLLDHIILTDEHYYSFTDEGLI 150 >gi|73667265|ref|YP_303281.1| DNA repair protein RadC [Ehrlichia canis str. Jake] gi|72394406|gb|AAZ68683.1| DNA repair protein RadC [Ehrlichia canis str. Jake] Length = 230 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 63/97 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ L+ADE Q GT++ P+YIRE++++ L L ATSII+ HNHPSG+ PS ADI Sbjct: 134 LYLNTKYKLLADETQDVGTVNQTPLYIREVIKKSLSLGATSIIIAHNHPSGDARPSKADI 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + T N + I + DH+I+ + SFK ++ Sbjct: 194 EITNQLAITCNNIGITLIDHVIVTSNDHYSFKTHNLL 230 >gi|297569910|ref|YP_003691254.1| DNA repair protein RadC [Desulfurivibrio alkaliphilus AHT2] gi|296925825|gb|ADH86635.1| DNA repair protein RadC [Desulfurivibrio alkaliphilus AHT2] Length = 246 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD ++A E + GT+ V+ RE+V+ + +A ++IL HNHPSGN NPS+ D Sbjct: 134 ILLDASYGILALEEIATGTLTAASVHPRELVKTAMAHNAAAVILAHNHPSGNTNPSEQDR 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 +T+++ L I + DH ++G SF ++ Sbjct: 194 RLTRHLYLALALCEIQLLDHCVVGADQRPYSFADHGLM 231 >gi|237715339|ref|ZP_04545820.1| conserved hypothetical protein [Bacteroides sp. D1] gi|237719692|ref|ZP_04550173.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|262405180|ref|ZP_06081730.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294645172|ref|ZP_06722895.1| DNA repair protein RadC [Bacteroides ovatus SD CC 2a] gi|294807027|ref|ZP_06765846.1| DNA repair protein RadC [Bacteroides xylanisolvens SD CC 1b] gi|229444648|gb|EEO50439.1| conserved hypothetical protein [Bacteroides sp. D1] gi|229450961|gb|EEO56752.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|262356055|gb|EEZ05145.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639503|gb|EFF57798.1| DNA repair protein RadC [Bacteroides ovatus SD CC 2a] gi|294445726|gb|EFG14374.1| DNA repair protein RadC [Bacteroides xylanisolvens SD CC 1b] gi|295086480|emb|CBK68003.1| DNA repair protein radc [Bacteroides xylanisolvens XB1A] Length = 231 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ LI S G ID +R I++ L AT I +VHNHPSGN PS D Sbjct: 135 LLLNQATKLIDKVRISTGGIDGTYTDVRTILREALLQRATQIAVVHNHPSGNIRPSQPDK 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T++I + +NI + DH+++ +D F SF ++ Sbjct: 195 TLTEHIRKAADTMNIHLIDHVVVCEDGFFSFADEGLL 231 >gi|325956489|ref|YP_004291901.1| DNA repair protein RadC [Lactobacillus acidophilus 30SC] gi|325333054|gb|ADZ06962.1| DNA repair protein RadC [Lactobacillus acidophilus 30SC] gi|327183317|gb|AEA31764.1| DNA repair protein RadC [Lactobacillus amylovorus GRL 1118] Length = 207 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L++D + +IA++ +GT++ + REI + + + I + HNHPSG PS +D Sbjct: 111 LYIDNASHIIAEKKLFQGTLNRSVAHPREIFRWAVIYGCSGIFIAHNHPSGKLMPSSSDF 170 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ + I DH I+G+ ++S + +++ Sbjct: 171 ELTEDLCQVAKMMKIDFLDHFIVGQGHYLSMREEKLV 207 >gi|194290593|ref|YP_002006500.1| DNA repair protein radc [Cupriavidus taiwanensis LMG 19424] gi|238692771|sp|B3R6F7|Y2508_CUPTR RecName: Full=UPF0758 protein RALTA_A2508 gi|193224428|emb|CAQ70439.1| DNA repair protein radC homolog, associated with replication fork [Cupriavidus taiwanensis LMG 19424] Length = 228 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 53/93 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N ++A E RGT+ VY RE+ ++ L +A II+ HNHP G PS +DI Sbjct: 128 LFLDPGNRMVASEELFRGTLTRTSVYPREVARQALAHNAAGIIVAHNHPRGTTAPSQSDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 ++T+ + TL+ +++ + DH I+ S Sbjct: 188 HLTRELARTLDLIDVRLLDHFIVAGHEIRSLAE 220 >gi|146301404|ref|YP_001195995.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101] gi|146155822|gb|ABQ06676.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101] Length = 154 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ + S G I V +R I L+ +AT+I++ HNHPSGN +PS+AD Sbjct: 58 LFLNHSFKALGLYEMSSGGITGTIVDLRMIFSAALKANATNIMITHNHPSGNTSPSEADK 117 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +MT I L+I + DH+II + + SF + Sbjct: 118 HMTAKIRQAGELLDIKLLDHLIITSETYYSFADEGAL 154 >gi|306829577|ref|ZP_07462767.1| DNA repair protein RadC [Streptococcus mitis ATCC 6249] gi|304428663|gb|EFM31753.1| DNA repair protein RadC [Streptococcus mitis ATCC 6249] Length = 226 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 49/94 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+ REI+ ++ ATS+ILVHNHPSG PS D Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSVILVHNHPSGAVAPSRNDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ++T+ + + ++ DH+I+ + S++ Sbjct: 189 HVTKLVKEACELMGLVFLDHLIVSHSDYFSYREK 222 >gi|15081501|ref|NP_150014.1| DNA repair protein RadC [Clostridium perfringens str. 13] gi|15076734|dbj|BAB62459.1| DNA repair protein RadC [Clostridium perfringens str. 13] Length = 145 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N + + V S GT++ V+ RE+ + + + SIIL HNHPSG+ +PS DI Sbjct: 49 IVLDVKNKINSISVASVGTLNSSIVHPREVFKTAILANGASIILAHNHPSGDTSPSKDDI 108 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T I + I + DH+I+G + F+S K II Sbjct: 109 NITTRIKECGVLMGIELLDHVILGDEKFISLKNEGII 145 >gi|319900227|ref|YP_004159955.1| DNA repair protein RadC [Bacteroides helcogenes P 36-108] gi|319415258|gb|ADV42369.1| DNA repair protein RadC [Bacteroides helcogenes P 36-108] Length = 228 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L +++ + LI SRG ID +R I++ L AT I L+HNHPSG+P+PS D Sbjct: 132 LLMNQASKLIDKVRISRGGIDQTTADVRTILREALLQRATQIALIHNHPSGSPHPSMEDK 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ I + +NI + DH+II + SF ++ Sbjct: 192 HLTELIKKAAHTMNIRLTDHVIITDGRYYSFCDEGLL 228 >gi|330995877|ref|ZP_08319773.1| DNA repair protein RadC [Paraprevotella xylaniphila YIT 11841] gi|329574408|gb|EGG55979.1| DNA repair protein RadC [Paraprevotella xylaniphila YIT 11841] Length = 248 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 47/97 (48%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L +++ ++ + S+G + V IR I++ L A I L HNHPSG PS D Sbjct: 151 LLMNQACRILDKILVSKGGLTETAVDIRLILREALLHRAPVIALCHNHPSGQVRPSMEDD 210 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + +NI + DHII+ + F S+ + Sbjct: 211 RLTDRLQKACRMMNIRLLDHIIVAEGGFYSYCEEGKL 247 >gi|28895890|ref|NP_802240.1| DNA repair protein RadC [Streptococcus pyogenes SSI-1] gi|73913741|sp|Q8K7J5|Y777_STRP3 RecName: Full=UPF0758 protein SpyM3_0777/SPs0978 gi|28811140|dbj|BAC64073.1| putative DNA repair protein [Streptococcus pyogenes SSI-1] Length = 226 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 49/94 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N + ++ GT+ REI+ + ATS+I++HNHPSGN PS D Sbjct: 129 LYLDNQNRIFEEKTIFIGTVRRSLAEPREILYYACKNMATSLIVIHNHPSGNIEPSSNDY 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + L II DHII+ + SF+ Sbjct: 189 CFTEKIKRSCEDLGIICLDHIIVSYKDYYSFREK 222 >gi|146295826|ref|YP_001179597.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409402|gb|ABP66406.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 230 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD +I GT+ VY R++V+ L +A+S+IL HNHP G+ PS DI Sbjct: 129 ICLDTQLNVIHSVPLFEGTVKEAVVYPRKVVECVLRYNASSVILAHNHPGGSVKPSMDDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 TQ I+ L+ + + V+DH I+ K + SF ++ Sbjct: 189 KTTQKIVNALSTIGVAVNDHFIVAKGEYYSFAQNGML 225 >gi|146294605|ref|YP_001185029.1| DNA repair protein RadC [Shewanella putrefaciens CN-32] gi|145566295|gb|ABP77230.1| DNA repair protein RadC [Shewanella putrefaciens CN-32] Length = 168 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + L+ + GT+D VY RE+V+ L ++A ++I HNHPSG PS AD Sbjct: 73 MLLDNQHQLLEFKELFFGTLDAASVYPREVVKAVLAVNAAAVIFAHNHPSGESEPSAADK 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ + L +++ V DHI++G+ VSF ++ Sbjct: 133 HITQRLTDALALIDVRVLDHIVVGR-TPVSFAERGLL 168 >gi|284050050|ref|ZP_06380260.1| DNA repair protein RadC [Arthrospira platensis str. Paraca] gi|291565709|dbj|BAI87981.1| DNA repair protein RadC [Arthrospira platensis NIES-39] Length = 243 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 54/94 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L +D N L+ ++ + GT + REI + L+ +AT +I+ HNHPSGN PS DI Sbjct: 139 LLMDVKNRLLGTKLLTIGTATETLAHPREIFREVLKHNATRLIIAHNHPSGNVEPSHQDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ ++ L++ + DH+I+G + S + + Sbjct: 199 ELTRQLLEGGQFLSLPILDHLILGNGDYGSIRQM 232 >gi|60680007|ref|YP_210151.1| putative DNA repair protein [Bacteroides fragilis NCTC 9343] gi|265765155|ref|ZP_06093430.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|60491441|emb|CAH06191.1| putative DNA repair protein [Bacteroides fragilis NCTC 9343] gi|263254539|gb|EEZ25973.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 230 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ +I S G ID +R I++ L AT I L+HNHPSG+ PS D Sbjct: 134 LLLNQACKVINKLRISTGGIDGTYADVRTILREALIGRATQIALIHNHPSGHAKPSQEDK 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I +NI + DH+I+ F SF +I Sbjct: 194 RLTGAIQKASQTMNITLVDHVIVCDGCFYSFADEGLI 230 >gi|189464342|ref|ZP_03013127.1| hypothetical protein BACINT_00683 [Bacteroides intestinalis DSM 17393] gi|189438132|gb|EDV07117.1| hypothetical protein BACINT_00683 [Bacteroides intestinalis DSM 17393] Length = 228 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ + +I SRG ID +R I++ L AT I L+HNHPSG+P PS D Sbjct: 132 LLLNQASRVIDKSRISRGGIDQTTADVRSILREALMQRATQIALIHNHPSGSPRPSTDDQ 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + +NI + DH+I+ + SF +I Sbjct: 192 RLTQLVQKGAQTMNIRLIDHVIVTDGVYYSFNDEGMI 228 >gi|291288346|ref|YP_003505162.1| DNA repair protein RadC [Denitrovibrio acetiphilus DSM 12809] gi|290885506|gb|ADD69206.1| DNA repair protein RadC [Denitrovibrio acetiphilus DSM 12809] Length = 221 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E +GT+D + VY REI +R + AT +I+ HNHPSGN +PS+ DI Sbjct: 125 LFLDVNKKLLGFENLFKGTVDRLAVYPREIAERAITSKATHVIVAHNHPSGNMSPSETDI 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I L L+I + DHIII F SFK ++I Sbjct: 185 TLTDKLIKALAALDINLADHIIITTKGFYSFKREQVI 221 >gi|227538101|ref|ZP_03968150.1| DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33300] gi|227242177|gb|EEI92192.1| DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33300] Length = 229 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ +++++ ++ RG D PV +R I++ L A+S+ILVHNHPSG+ PS+ D+ Sbjct: 132 LYLNRASVILSQQLIGRGGNDFTPVDVRIILKHALNCQASSMILVHNHPSGSLKPSNQDL 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ ++I V DH+I + SF+ ++ Sbjct: 192 QLTKKIVDASKIMDIRVMDHVIFTNSKYFSFQDEGLM 228 >gi|71907853|ref|YP_285440.1| DNA repair protein RadC [Dechloromonas aromatica RCB] gi|71847474|gb|AAZ46970.1| DNA repair protein RadC [Dechloromonas aromatica RCB] Length = 193 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + LI E RGT+ VY RE+V+ L +A ++ + HNHPSG PS AD Sbjct: 97 LYLDAQHRLIEVEELFRGTLTQTSVYPRELVKGALARNAAALAVAHNHPSGEAEPSRADE 156 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ++ L+ +++ V DH ++ D VSF ++ Sbjct: 157 LLTQSLKQALSLVDVRVIDHFVVAGDTVVSFAERGLV 193 >gi|282878989|ref|ZP_06287753.1| DNA repair protein [Prevotella buccalis ATCC 35310] gi|281298988|gb|EFA91393.1| DNA repair protein [Prevotella buccalis ATCC 35310] Length = 148 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ + +IA S G I V +R I+Q L +A+ I+L HNHPSGN +PS D Sbjct: 52 LYLNQASEVIAYNTISEGGISETAVDVRMILQGALLTNASQILLCHNHPSGNLHPSTQDD 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L DH+II + + S++ I Sbjct: 112 MLTRRIKEACEILRYHFTDHLIISNNGYYSYRDEGRI 148 >gi|169636491|ref|YP_001716032.1| putative DNA repair protein RadC [Geobacillus stearothermophilus] gi|169403031|emb|CAP08244.1| putative DNA repair protein RadC [Geobacillus stearothermophilus] Length = 146 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N ++A G+++ V+ RE+ + + ++ SII+ H HPSG+ PS D+ Sbjct: 48 MCLNTKNEVVAVHRCHIGSLNSSIVHPREVFKAAILNNSASIIVAHQHPSGDVTPSKEDV 107 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRI 96 MT+ + L I V DH++I K + S K Sbjct: 108 EMTRRLAEAGRILGIEVLDHLVINYKAEYTSLKERGF 144 >gi|329964659|ref|ZP_08301713.1| putative DNA repair protein RadC [Bacteroides fluxus YIT 12057] gi|328525059|gb|EGF52111.1| putative DNA repair protein RadC [Bacteroides fluxus YIT 12057] Length = 258 Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L +++ + +I SRG ID +R I++ L AT I L+HNHPSGNP+PS D Sbjct: 162 LLMNQASRVIDKVRISRGGIDQTTADVRSILREALLQRATQIALIHNHPSGNPHPSRDDQ 221 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + +NI + DH+II + SF ++ Sbjct: 222 RLTELVQKGAQTMNIRLTDHVIITDGRYYSFCDEGML 258 >gi|256963297|ref|ZP_05567468.1| DNA repair protein RadC [Enterococcus faecalis HIP11704] gi|257080170|ref|ZP_05574531.1| DNA repair protein RadC [Enterococcus faecalis JH1] gi|307270181|ref|ZP_07551496.1| DNA repair protein RadC domain protein [Enterococcus faecalis TX4248] gi|307282664|ref|ZP_07562867.1| DNA repair protein RadC domain protein [Enterococcus faecalis TX0860] gi|256953793|gb|EEU70425.1| DNA repair protein RadC [Enterococcus faecalis HIP11704] gi|256988200|gb|EEU75502.1| DNA repair protein RadC [Enterococcus faecalis JH1] gi|306503720|gb|EFM72949.1| DNA repair protein RadC domain protein [Enterococcus faecalis TX0860] gi|306513472|gb|EFM82089.1| DNA repair protein RadC domain protein [Enterococcus faecalis TX4248] Length = 117 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N ++A G+++ V+ RE+ + + +A S+I+ H HPS + PS DI Sbjct: 20 MCLNTRNNVVAVLRCHVGSLNASLVHPREVFKSAILNNAASVIVAHQHPSDDITPSKEDI 79 Query: 61 NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97 N+T+ ++ L+I V DH+++ + F S K I Sbjct: 80 NVTKRLVEAGKLLDIEVLDHLVVNSDNGFTSLKERGYI 117 >gi|189462975|ref|ZP_03011760.1| hypothetical protein BACCOP_03677 [Bacteroides coprocola DSM 17136] gi|189430257|gb|EDU99241.1| hypothetical protein BACCOP_03677 [Bacteroides coprocola DSM 17136] Length = 230 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ + +I SRG + V +R I++ L A S++L HNHPSGN +PS D Sbjct: 134 LLLNQSSKIIDRICISRGGLASTQVDVRCILREALLKRAVSMVLCHNHPSGNTSPSRDDD 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + +NI + DH++I + S+ I Sbjct: 194 RLTEALRRAAEVMNIRLLDHLVITDGGYYSYCDEGRI 230 >gi|21910313|ref|NP_664581.1| DNA repair protein RadC [Streptococcus pyogenes MGAS315] gi|21904509|gb|AAM79384.1| putative DNA repair protein [Streptococcus pyogenes MGAS315] Length = 209 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 49/94 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N + ++ GT+ REI+ + ATS+I++HNHPSGN PS D Sbjct: 112 LYLDNQNRIFEEKTIFIGTVRRSLAEPREILYYACKNMATSLIVIHNHPSGNIEPSSNDY 171 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ I + L II DHII+ + SF+ Sbjct: 172 CFTEKIKRSCEDLGIICLDHIIVSYKDYYSFREK 205 >gi|78486256|ref|YP_392181.1| DNA repair protein RadC [Thiomicrospira crunogena XCL-2] gi|78364542|gb|ABB42507.1| DNA repair protein radC homolog [Thiomicrospira crunogena XCL-2] Length = 237 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD+ N I GTI+ V+IRE+++ L+ A ++IL HNHPSG+P PS +D Sbjct: 140 VLLDQQNQFIQFVPLFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTPSQSDR 199 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97 ++T I L + DHII+G + SF I+ Sbjct: 200 DLTHQIQQGLQLIETRCLDHIILGDHGRWYSFTQQGIL 237 >gi|78357485|ref|YP_388934.1| DNA repair protein RadC [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219890|gb|ABB39239.1| DNA repair protein RadC [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 225 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 57/95 (60%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 ++D+ N L+A E +RGT++ +Y R++++ L A+ +ILVHNHP G+ PS D+ Sbjct: 130 YMDRQNRLLAWERATRGTVNASAIYPRDLMEAALRYKASGLILVHNHPGGSARPSAPDVE 189 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + + L + + DH+I+ ++ S K + Sbjct: 190 VTKLVARSAASLGMTLVDHVIVTEEGHYSLKEDGL 224 >gi|254251634|ref|ZP_04944952.1| DNA repair protein RadC [Burkholderia dolosa AUO158] gi|124894243|gb|EAY68123.1| DNA repair protein RadC [Burkholderia dolosa AUO158] Length = 258 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + +I E +RG++ + VY REIV+R L L+A ++I+ HNHPSG PS D Sbjct: 162 LYLDARHGVIDVEESARGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVQPSAEDR 221 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH+++G SF + Sbjct: 222 RLTRVLREALALVDVRLLDHVVVGTAETFSFARAGWL 258 >gi|253564158|ref|ZP_04841615.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947934|gb|EES88216.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301161548|emb|CBW21088.1| putative DNA repair protein [Bacteroides fragilis 638R] Length = 230 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ +I S G ID +R I++ L AT I L+HNHPSG+ PS D Sbjct: 134 LLLNQACKVINRLRISTGGIDGTYADVRTILREALIGRATQIALIHNHPSGHAKPSQEDK 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I +NI + DH+I+ F SF +I Sbjct: 194 RLTGAIQKASQTMNITLVDHVIVCDGCFYSFADEGLI 230 >gi|325103293|ref|YP_004272947.1| DNA repair protein RadC [Pedobacter saltans DSM 12145] gi|324972141|gb|ADY51125.1| DNA repair protein RadC [Pedobacter saltans DSM 12145] Length = 152 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+K N ++ S G + V ++ + L+ A S+IL HNHPSGN PSDAD Sbjct: 56 MLLNKSNKVLGISHISTGGMSGTIVDVKVLFGIALKGGACSLILAHNHPSGNITPSDADK 115 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T II L+I V DHII+ + F SF + +I Sbjct: 116 KLTNKIIEASKYLDIEVFDHIIVTPEKFYSFAEMGLI 152 >gi|317484766|ref|ZP_07943665.1| DNA repair protein RadC [Bilophila wadsworthia 3_1_6] gi|316923973|gb|EFV45160.1| DNA repair protein RadC [Bilophila wadsworthia 3_1_6] Length = 226 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 53/94 (56%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D N L+ E +RGT+ VP Y R+I++R L+ A+ LVHNHP G P S DI MT Sbjct: 133 DAQNRLLTWERLARGTVGMVPCYPRDILERVLQRKASGFFLVHNHPGGTPKASPEDIEMT 192 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +NI + + + DH+I+G A S + ++ Sbjct: 193 RNIQRIATSMGLRLLDHLIVGDGACYSIREDGLL 226 >gi|282889987|ref|ZP_06298522.1| hypothetical protein pah_c008o090 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500180|gb|EFB42464.1| hypothetical protein pah_c008o090 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 238 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + D +I + GT+ V+ RE+ + A S+ILVHNHPSG+P PS D+ Sbjct: 135 ILQDVKGYVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPTPSKEDL 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ ++ + I V+DHIIIG+D +VS + Sbjct: 195 DVTKTLVAVGRLVGICVNDHIIIGRDRYVSLREEGF 230 >gi|172046616|sp|Q31EB6|Y1917_THICR RecName: Full=UPF0758 protein Tcr_1917 Length = 225 Score = 110 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD+ N I GTI+ V+IRE+++ L+ A ++IL HNHPSG+P PS +D Sbjct: 128 VLLDQQNQFIQFVPLFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTPSQSDR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97 ++T I L + DHII+G + SF I+ Sbjct: 188 DLTHQIQQGLQLIETRCLDHIILGDHGRWYSFTQQGIL 225 >gi|167755855|ref|ZP_02427982.1| hypothetical protein CLORAM_01372 [Clostridium ramosum DSM 1402] gi|167704794|gb|EDS19373.1| hypothetical protein CLORAM_01372 [Clostridium ramosum DSM 1402] Length = 225 Score = 110 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ +I ++ G + + RE+ + L + +++VHNHPSGNP PS DI Sbjct: 127 LCLNSRLEVIKEKTVFIGGNNISIISGRELFKEALICGSNRVMVVHNHPSGNPEPSIEDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + L+I V DH+IIG+ F SF +II Sbjct: 187 EATERLYSMAKELDIDVVDHLIIGRSRFYSFASNKII 223 >gi|256004185|ref|ZP_05429168.1| DNA repair protein RadC [Clostridium thermocellum DSM 2360] gi|281419441|ref|ZP_06250455.1| DNA repair protein RadC [Clostridium thermocellum JW20] gi|255991775|gb|EEU01874.1| DNA repair protein RadC [Clostridium thermocellum DSM 2360] gi|281406847|gb|EFB37111.1| DNA repair protein RadC [Clostridium thermocellum JW20] gi|316939647|gb|ADU73681.1| DNA repair protein RadC [Clostridium thermocellum DSM 1313] Length = 221 Score = 110 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 53/95 (55%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + +IA V S G +++V V+ RE+ + AT++I+ HNHPSG+ PS DI + Sbjct: 125 LNGASEVIATRVVSVGLVNNVQVHPREVFADPITDRATAVIVAHNHPSGSVAPSQEDIEV 184 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + N L I + DHII + + SF + Sbjct: 185 TKRLKDAGNTLGIKLIDHIIFSRKGYFSFLENGQM 219 >gi|300772729|ref|ZP_07082599.1| DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33861] gi|300761032|gb|EFK57858.1| DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33861] Length = 229 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ ++++ ++ +G D PV +R I++ L A+S+ILVHNHPSG+ PS+ D+ Sbjct: 132 LYLNRASVILNQQLIGKGGNDFTPVDVRIILKHALNCQASSMILVHNHPSGSLKPSNQDL 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ ++I V DH+I + SF+ ++ Sbjct: 192 QLTKKIVDASKIMDIRVMDHVIFTNSKYFSFQDEGLM 228 >gi|239501672|ref|ZP_04660982.1| DNA repair protein, associated with replication forks [Acinetobacter baumannii AB900] Length = 235 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G++ H V + + ++ L+ A +++ HNHP G+P PS DI Sbjct: 131 LCLDAELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSPQPSLEDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I + DH II + SF +++ Sbjct: 191 KLTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 227 >gi|113970038|ref|YP_733831.1| DNA repair protein RadC [Shewanella sp. MR-4] gi|113884722|gb|ABI38774.1| DNA repair protein RadC [Shewanella sp. MR-4] Length = 164 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + L+ + GT+D VY RE+V+ L ++A ++I HNHPSG PS AD Sbjct: 69 MLLDNQHQLLEFKELFFGTLDAASVYPREVVKAVLAVNAAAVIFAHNHPSGESEPSAADK 128 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ V DHI++G+ VSF ++ Sbjct: 129 YITQRLTDALALIDVRVLDHIVVGR-TPVSFAERGLL 164 >gi|301310981|ref|ZP_07216910.1| DNA repair protein RadC [Bacteroides sp. 20_3] gi|300831044|gb|EFK61685.1| DNA repair protein RadC [Bacteroides sp. 20_3] Length = 235 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 47/91 (51%) Query: 7 NILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNI 66 N +I S+G ++ V IR +++ + A+ IIL HNHPSG+ PS D +T+ I Sbjct: 143 NKVIQKVKISQGGVNQTSVDIRLVLKAAINALASGIILCHNHPSGSLRPSTHDDALTERI 202 Query: 67 ITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++I + DHII+ + S+ + Sbjct: 203 QKAAKLMDIRILDHIILSDSGYYSYADEGRL 233 >gi|329724695|gb|EGG61201.1| DNA repair protein RadC [Staphylococcus epidermidis VCU144] Length = 226 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+ +GT++ ++ RE+ + S+ SII+VHNHPSG+ PS DI Sbjct: 128 LLLNSKNIVTKQAWVYKGTLNSSIIHPREVFNIAIRESSNSIIVVHNHPSGDVTPSKEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + + L I + DHIIIG + F S Sbjct: 188 TTTYRLKECGDILGINLLDHIIIGDNKFTSLVEAGY 223 >gi|293611113|ref|ZP_06693412.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826765|gb|EFF85131.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 235 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G++ H PV + + ++ L+ A +++ HNHP G+ PS DI Sbjct: 131 LCLDPELRKLHFKKLFFGSVQHCPVSVNQTLRYALQQHACQLVIAHNHPFGSAQPSSQDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I + DH II + SF +++ Sbjct: 191 ALTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 227 >gi|114776910|ref|ZP_01451953.1| DNA repair protein RadC [Mariprofundus ferrooxydans PV-1] gi|114552996|gb|EAU55427.1| DNA repair protein RadC [Mariprofundus ferrooxydans PV-1] Length = 261 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F D+ + L+ ++ GT+D VY R +++R LEL A +IL HNHP G P+ S+ DI Sbjct: 165 MFTDQQHRLLTTQILFEGTVDRTAVYPRNLMKRALELDARGMILFHNHPGGTPHASNEDI 224 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + PL + + DH +I +SF+ Sbjct: 225 ELTRRMAEACAPLELKILDHFLIADKEVLSFREHGW 260 >gi|298242247|ref|ZP_06966054.1| DNA repair protein RadC [Ktedonobacter racemifer DSM 44963] gi|297555301|gb|EFH89165.1| DNA repair protein RadC [Ktedonobacter racemifer DSM 44963] Length = 244 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N ++ + + GT++ + EI + + + IIL HNHPSG+P PS DI Sbjct: 147 LLLDTKNQVVENISRYHGTVNSSVMRAAEIFRPAVIRNCPGIILCHNHPSGDPTPSPEDI 206 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ ++ LNI + DHIIIG FVS K Sbjct: 207 ESTKQLVVAGRILNIELVDHIIIGNLRFVSLKEH 240 >gi|27468254|ref|NP_764891.1| DNA repair protein RadC-like protein [Staphylococcus epidermidis ATCC 12228] gi|251811058|ref|ZP_04825531.1| DNA repair protein RadC [Staphylococcus epidermidis BCM-HMP0060] gi|282875922|ref|ZP_06284789.1| DNA repair protein RadC [Staphylococcus epidermidis SK135] gi|293366390|ref|ZP_06613069.1| DNA repair protein RadC [Staphylococcus epidermidis M23864:W2(grey)] gi|38372483|sp|Q8CNZ4|Y1336_STAES RecName: Full=UPF0758 protein SE_1336 gi|27315800|gb|AAO04935.1|AE016748_169 DNA repair protein RadC-like protein [Staphylococcus epidermidis ATCC 12228] gi|251805434|gb|EES58091.1| DNA repair protein RadC [Staphylococcus epidermidis BCM-HMP0060] gi|281294947|gb|EFA87474.1| DNA repair protein RadC [Staphylococcus epidermidis SK135] gi|291319515|gb|EFE59882.1| DNA repair protein RadC [Staphylococcus epidermidis M23864:W2(grey)] gi|329733795|gb|EGG70121.1| DNA repair protein RadC [Staphylococcus epidermidis VCU045] gi|329737143|gb|EGG73397.1| DNA repair protein RadC [Staphylococcus epidermidis VCU028] Length = 226 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+ +GT++ ++ RE+ + S+ SII+VHNHPSG+ PS DI Sbjct: 128 LLLNSKNIVTKQAWVYKGTLNSSIIHPREVFNIAIRESSNSIIVVHNHPSGDVTPSKEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + + L I + DHIIIG + F S Sbjct: 188 TTTYRLKECGDILGINLLDHIIIGDNKFTSLVEAGY 223 >gi|223940790|ref|ZP_03632624.1| DNA repair protein RadC [bacterium Ellin514] gi|223890547|gb|EEF57074.1| DNA repair protein RadC [bacterium Ellin514] Length = 244 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 6/102 (5%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ LI E ++GT+D + ++ RE+ + + +A++I+L HNHPSG+P PS+ADI Sbjct: 141 VLLNTRRKLIRVENITQGTLDTLLIHPREVFKSAISANASAIVLAHNHPSGDPTPSEADI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK------DAFVSFKGLRI 96 +T+++I L I + DHII+G+ + S + L Sbjct: 201 KVTRDLIRAGQLLKIEILDHIILGRRTNERPKDYASLRELGY 242 >gi|242242925|ref|ZP_04797370.1| DNA repair protein RadC [Staphylococcus epidermidis W23144] gi|242233640|gb|EES35952.1| DNA repair protein RadC [Staphylococcus epidermidis W23144] Length = 226 Score = 110 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ NI+ +GT++ ++ RE+ + S+ SII+VHNHPSG+ PS DI Sbjct: 128 LLLNSKNIVTKQAWVYKGTLNSSIIHPREVFNIAIRESSNSIIVVHNHPSGDVTPSKEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T + + L I + DHIIIG + F S Sbjct: 188 TTTYRLKECGDILGINLLDHIIIGDNKFTSLVEAGY 223 >gi|237734823|ref|ZP_04565304.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229382151|gb|EEO32242.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 225 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ +I ++ G + + RE+ + L + +++VHNHPSGNP PS DI Sbjct: 127 LCLNSRLEVIKEKTVFIGGNNISIISGRELFKEALICGSNRVMVVHNHPSGNPEPSIEDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + L+I V DH+IIG+ F SF +II Sbjct: 187 EATERLYSMAKELDIDVVDHLIIGRSRFYSFASNKII 223 >gi|150009187|ref|YP_001303930.1| putative DNA repair protein [Parabacteroides distasonis ATCC 8503] gi|256841743|ref|ZP_05547249.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298377073|ref|ZP_06987027.1| DNA repair protein RadC [Bacteroides sp. 3_1_19] gi|149937611|gb|ABR44308.1| putative DNA repair protein [Parabacteroides distasonis ATCC 8503] gi|256736637|gb|EEU49965.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|298266057|gb|EFI07716.1| DNA repair protein RadC [Bacteroides sp. 3_1_19] Length = 235 Score = 110 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 47/91 (51%) Query: 7 NILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNI 66 N +I S+G ++ V IR +++ + A+ IIL HNHPSG+ PS D +T+ I Sbjct: 143 NKVIQKVKISQGGVNQTSVDIRLVLKAAINALASGIILCHNHPSGSLRPSTHDDALTERI 202 Query: 67 ITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++I + DHII+ + S+ + Sbjct: 203 QKAAKLMDIRILDHIILSDSGYYSYADEGRL 233 >gi|125975527|ref|YP_001039437.1| DNA repair protein RadC [Clostridium thermocellum ATCC 27405] gi|125715752|gb|ABN54244.1| DNA repair protein RadC [Clostridium thermocellum ATCC 27405] Length = 221 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 53/95 (55%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + +IA V S G +++V V+ RE+ + AT++I+ HNHPSG+ PS DI + Sbjct: 125 LNGASEVIATRVVSVGLVNNVQVHPREVFADPITDRATAVIVAHNHPSGSVAPSQEDIEV 184 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + N L I + DHII + + SF + Sbjct: 185 TKRLKDAGNTLGIKLIDHIIFSRKGYFSFLENGQM 219 >gi|300869667|ref|YP_003784538.1| putative DNA repair protein RadC [Brachyspira pilosicoli 95/1000] gi|300687366|gb|ADK30037.1| putative DNA repair protein, RadC [Brachyspira pilosicoli 95/1000] Length = 230 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + LI+ E RGTID +Y R++V++ L L ++ +IL HNHPSG PS ADI Sbjct: 123 ICLDINKRLISIEQIFRGTIDSATIYPRDLVEKALSLGSSYVILSHNHPSGIAKPSKADI 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I +NI V DHIII + SF+ I+ Sbjct: 183 EITEIIYKAFFMVNIKVLDHIIIAGNIHYSFRENGIL 219 >gi|167747626|ref|ZP_02419753.1| hypothetical protein ANACAC_02347 [Anaerostipes caccae DSM 14662] gi|239625062|ref|ZP_04668093.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|167652988|gb|EDR97117.1| hypothetical protein ANACAC_02347 [Anaerostipes caccae DSM 14662] gi|239521448|gb|EEQ61314.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 282 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 56/95 (58%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L + +I + S GT++ + REI + + +A S+IL+HNHPSG+ PS D+ M Sbjct: 45 LKTNGQVINVNIASMGTLNSCILSPREIFKASILSNAASVILMHNHPSGDCTPSKQDVLM 104 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ + I V DH+I+GK+ ++S K ++ Sbjct: 105 TKRLVACGELIGITVLDHVILGKETYLSMKEANMM 139 >gi|258405551|ref|YP_003198293.1| DNA repair protein RadC [Desulfohalobium retbaense DSM 5692] gi|257797778|gb|ACV68715.1| DNA repair protein RadC [Desulfohalobium retbaense DSM 5692] Length = 228 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 53/94 (56%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D N L GT+D VY RE+++ L A+ +ILVHNHP G+P PS D ++T Sbjct: 135 DNKNRLCDFCRLFTGTVDQTAVYPREVLRLALTKQASGLILVHNHPGGDPTPSPQDKDLT 194 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +++ L + DH+I+ ++AF SF+ ++ Sbjct: 195 NRLLSASRELGFRILDHVIVCEEAFFSFQSSHML 228 >gi|217967270|ref|YP_002352776.1| DNA repair protein RadC [Dictyoglomus turgidum DSM 6724] gi|217336369|gb|ACK42162.1| DNA repair protein RadC [Dictyoglomus turgidum DSM 6724] Length = 228 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +++D N + + ++G ++ V REI + L+ +++ +IL HNHPSG+ PS+ DI Sbjct: 132 IYMDVKNKCLNKRLIAKGDLNIVYASPREIFKYALQENSSKLILAHNHPSGDLTPSEDDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ +I L + + DH+II + +VS K ++I Sbjct: 192 IFTKRLIEAGKILGLEILDHLIIYNEDYVSLKEKKLI 228 >gi|225870498|ref|YP_002746445.1| DNA repair protein RadC [Streptococcus equi subsp. equi 4047] gi|254789660|sp|C0MA71|Y1136_STRE4 RecName: Full=UPF0758 protein SEQ_1136 gi|225699902|emb|CAW93813.1| DNA repair protein RadC [Streptococcus equi subsp. equi 4047] Length = 225 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD N +I ++ GT+ REI+ + ATS+I+VHNHPSG PS D Sbjct: 128 IYLDSQNKIIEEKTIFIGTVRKSIAEPREILYYACKNMATSLIVVHNHPSGLTKPSANDY 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 + T+ I + + L +I DHII+ K + SF+ Sbjct: 188 HFTEKIKRSCDYLGLICLDHIIVSKYDYYSFREK 221 >gi|218131967|ref|ZP_03460771.1| hypothetical protein BACEGG_03590 [Bacteroides eggerthii DSM 20697] gi|217985843|gb|EEC52183.1| hypothetical protein BACEGG_03590 [Bacteroides eggerthii DSM 20697] Length = 241 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ +I SRG ID +R +++ L AT I LVHNHPSGNP+PSD D Sbjct: 145 LLLNQATHVIDKVRISRGGIDQTSADVRSVLREALLQRATQIALVHNHPSGNPHPSDDDR 204 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I +NI + DH+II + SF ++ Sbjct: 205 RLTQLIQKGAQTMNIRMIDHVIITDGLYYSFNDEGML 241 >gi|237739010|ref|ZP_04569491.1| DNA repair protein radC [Fusobacterium sp. 2_1_31] gi|229423610|gb|EEO38657.1| DNA repair protein radC [Fusobacterium sp. 2_1_31] Length = 242 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N +IA E S GT+D +Y REI +R + +A SII+ HNHPSGN PS DI Sbjct: 146 IYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNTCPSKCDI 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I L ++ +HIII +D++ SF +I Sbjct: 206 DITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI 242 >gi|312794199|ref|YP_004027122.1| DNA repair protein radc [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181339|gb|ADQ41509.1| DNA repair protein RadC [Caldicellulosiruptor kristjanssonii 177R1B] Length = 232 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD +I GT+ VY R++V+ + +A+S+IL HNHP G+ PS DI Sbjct: 131 ICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 TQ I+ L+ + + V+DH I+ KD + SF ++ Sbjct: 191 KTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >gi|294783990|ref|ZP_06749312.1| DNA repair protein RadC [Fusobacterium sp. 1_1_41FAA] gi|294479802|gb|EFG27581.1| DNA repair protein RadC [Fusobacterium sp. 1_1_41FAA] Length = 236 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N +IA E S GT+D +Y REI +R + +A SII+ HNHPSGN PS DI Sbjct: 140 IYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNTCPSKCDI 199 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I L ++ +HIII +D++ SF +I Sbjct: 200 DITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI 236 >gi|317051923|ref|YP_004113039.1| DNA repair protein RadC [Desulfurispirillum indicum S5] gi|316947007|gb|ADU66483.1| DNA repair protein RadC [Desulfurispirillum indicum S5] Length = 216 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 50/95 (52%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD ++ + + GT++ V+ RE+ L A SII+ HNHPSG+ PS D N+ Sbjct: 122 LDGAGCVLQRRIVTIGTLNASLVHPREVFSDALTDRAASIIVAHNHPSGSVEPSQEDHNI 181 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + L I + DHIII VSFK + Sbjct: 182 TRRLRQSGELLGIPLLDHIIISPKGEVSFKECNYL 216 >gi|325123441|gb|ADY82964.1| DNA repair protein, associated with replication forks [Acinetobacter calcoaceticus PHEA-2] Length = 239 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G++ H V + + ++ L+ A +++ HNHP G+P PS DI Sbjct: 135 LCLDPELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSPQPSSEDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I + DH II + SF +++ Sbjct: 195 ALTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 231 >gi|303236161|ref|ZP_07322762.1| putative DNA repair protein RadC [Prevotella disiens FB035-09AN] gi|302483667|gb|EFL46661.1| putative DNA repair protein RadC [Prevotella disiens FB035-09AN] Length = 229 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L ++++ LI + SRG + V +R I++ L +AT + + HNHPS N +PS D Sbjct: 133 LLMNQNYKLIESKPISRGGLTETSVDVRVILKSALLKNATVVAICHNHPSNNAHPSREDD 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + DH+II A+ S++ I Sbjct: 193 IITKRVKEACEIMRLYFLDHLIITDGAYYSYREEGRI 229 >gi|312878119|ref|ZP_07738052.1| DNA repair protein RadC [Caldicellulosiruptor lactoaceticus 6A] gi|311795101|gb|EFR11497.1| DNA repair protein RadC [Caldicellulosiruptor lactoaceticus 6A] Length = 232 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD +I GT+ VY R++V+ + +A+S+IL HNHP G+ PS DI Sbjct: 131 ICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 TQ I+ L+ + + V+DH I+ KD + SF ++ Sbjct: 191 KTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >gi|117920251|ref|YP_869443.1| DNA repair protein RadC [Shewanella sp. ANA-3] gi|117612583|gb|ABK48037.1| DNA repair protein RadC [Shewanella sp. ANA-3] Length = 168 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + L+ + GT+D VY RE+V+ L ++A ++I HNHPSG PS AD Sbjct: 73 MLLDNQHQLLEFKELFFGTLDAASVYPREVVKVVLAVNAAAVIFAHNHPSGESEPSVADK 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ + L +++ V DHI++G+ VSF ++ Sbjct: 133 HITQRLTDALALIDVRVLDHIVVGR-TPVSFAERGLL 168 >gi|294842541|ref|ZP_06787224.1| DNA repair protein RadC [Acinetobacter sp. 6014059] gi|322509402|gb|ADX04856.1| DNA repair protein radC-like protein [Acinetobacter baumannii 1656-2] gi|323519423|gb|ADX93804.1| DNA repair protein, associated with replication forks [Acinetobacter baumannii TCDC-AB0715] Length = 235 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 47/97 (48%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G++ H V + + ++ L+ A +++ HNHP G+ PS DI Sbjct: 131 LCLDAELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSAQPSLEDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I + DH II + SF +++ Sbjct: 191 KLTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 227 >gi|126178013|ref|YP_001045978.1| DNA repair protein RadC [Methanoculleus marisnigri JR1] gi|125860807|gb|ABN55996.1| DNA replication and repair protein RadC [Methanoculleus marisnigri JR1] Length = 223 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 51/95 (53%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ +I + + G ++ V+ RE+ + A S+ILVHNHPSG PS D+ + Sbjct: 129 LNGAGAVIERRIVTVGILNQSLVHPREVFSDAITDRAASVILVHNHPSGTLEPSAQDLAI 188 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ + L I V DHII+ K+ S K L + Sbjct: 189 TRQLVEAGSILGIRVLDHIIVTKNGCASLKELGHL 223 >gi|222528576|ref|YP_002572458.1| DNA repair protein RadC [Caldicellulosiruptor bescii DSM 6725] gi|312623124|ref|YP_004024737.1| DNA repair protein radc [Caldicellulosiruptor kronotskyensis 2002] gi|222455423|gb|ACM59685.1| DNA repair protein RadC [Caldicellulosiruptor bescii DSM 6725] gi|312203591|gb|ADQ46918.1| DNA repair protein RadC [Caldicellulosiruptor kronotskyensis 2002] Length = 232 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD +I GT+ VY R++V+ + +A+S+IL HNHP G+ PS DI Sbjct: 131 ICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 TQ I+ L+ + + V+DH I+ KD + SF ++ Sbjct: 191 KTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >gi|317474431|ref|ZP_07933705.1| DNA repair protein RadC [Bacteroides eggerthii 1_2_48FAA] gi|316909112|gb|EFV30792.1| DNA repair protein RadC [Bacteroides eggerthii 1_2_48FAA] Length = 241 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ +I SRG ID +R +++ L AT I LVHNHPSGNP+PSD D Sbjct: 145 LLLNQATHVIDKVRISRGGIDQTSADVRSVLREALLQRATQIALVHNHPSGNPHPSDDDR 204 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I +NI + DH+II + SF ++ Sbjct: 205 RLTQLIQKGAQTMNIRMIDHVIITDGLYYSFNDEGML 241 >gi|288817942|ref|YP_003432289.1| DNA repair protein [Hydrogenobacter thermophilus TK-6] gi|288787341|dbj|BAI69088.1| DNA repair protein [Hydrogenobacter thermophilus TK-6] gi|308751539|gb|ADO45022.1| DNA repair protein RadC [Hydrogenobacter thermophilus TK-6] Length = 225 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 47/95 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L N LI ++ + G ++ V ++I+ + SIIL H HP G P PS ADI Sbjct: 128 LYLTPSNTLIEYDLVAVGRLNSVFADPKDILYGAVRSVCHSIILAHTHPGGEPKPSKADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 + TQ + L + DHIII K + S + Sbjct: 188 DFTQRVKKACEILGFELLDHIIITKKGYFSMREGG 222 >gi|301046939|ref|ZP_07194052.1| DNA repair protein RadC domain protein [Escherichia coli MS 185-1] gi|300301126|gb|EFJ57511.1| DNA repair protein RadC domain protein [Escherichia coli MS 185-1] Length = 142 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 33/81 (40%), Positives = 51/81 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG PS AD Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121 Query: 61 NMTQNIITTLNPLNIIVHDHI 81 +T+ ++ L ++I V DH+ Sbjct: 122 LITERLVQALALVDIRVPDHL 142 >gi|119487791|ref|ZP_01621300.1| DNA repair protein RadC [Lyngbya sp. PCC 8106] gi|119455624|gb|EAW36761.1| DNA repair protein RadC [Lyngbya sp. PCC 8106] Length = 243 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 53/93 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N L+ +V + GT + REI + ++ AT +I+ HNHPSGN PS DI Sbjct: 139 LLLDVKNRLLGTKVITIGTATETLAHPREIFREVIKYGATRMIISHNHPSGNVEPSPEDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 +T+ ++ L+I + DH+I+G+ F S + Sbjct: 199 TLTRQLLAGAQVLSIPILDHLILGQGEFQSLRQ 231 >gi|184159489|ref|YP_001847828.1| DNA repair protein [Acinetobacter baumannii ACICU] gi|183211083|gb|ACC58481.1| DNA repair protein [Acinetobacter baumannii ACICU] Length = 239 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 47/97 (48%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G++ H V + + ++ L+ A +++ HNHP G+ PS DI Sbjct: 135 LCLDAELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSAQPSLEDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I + DH II + SF +++ Sbjct: 195 KLTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 231 >gi|289547849|ref|YP_003472837.1| DNA repair protein RadC [Thermocrinis albus DSM 14484] gi|289181466|gb|ADC88710.1| DNA repair protein RadC [Thermocrinis albus DSM 14484] Length = 224 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L +N +I EV + G ++ + ++I+ R + + SI++VHNHP G+ PS DI Sbjct: 128 VYLGPNNKVIDYEVVAIGRMNSLYAEPKDILYRAVHTACYSIVVVHNHPKGDLKPSQEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L + DH+II K +VS ++ Sbjct: 188 EFTKRLKKACELLGFQLLDHLIINKKGYVSLLQTGLM 224 >gi|114047276|ref|YP_737826.1| DNA repair protein RadC [Shewanella sp. MR-7] gi|113888718|gb|ABI42769.1| DNA repair protein RadC [Shewanella sp. MR-7] Length = 168 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + L+ + GT+D VY RE+V+ L ++A ++I HNHPSG PS AD Sbjct: 73 MLLDNQHQLLEFKELFFGTLDAASVYPREVVKAVLAVNAAAVIFAHNHPSGESEPSAADK 132 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++TQ + L +++ V DHI++G+ VSF ++ Sbjct: 133 HITQRLTDALALIDVRVLDHIVVGR-TPVSFAERGLL 168 >gi|227892639|ref|ZP_04010444.1| DNA repair protein RadC [Lactobacillus ultunensis DSM 16047] gi|227865510|gb|EEJ72931.1| DNA repair protein RadC [Lactobacillus ultunensis DSM 16047] Length = 212 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 52/96 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L++D + +IA++ +GT++ + REI + + + I + HNHPSG PS D Sbjct: 116 LYIDNGSHVIAEKKLFQGTLNRSVAHPREIFRWAVIYGCSGIFIAHNHPSGKLMPSSNDF 175 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+++ + I DH I+G+ ++S + ++ Sbjct: 176 ELTEDLNEVAKMMKIDFLDHFIVGQGHYLSMREEKL 211 >gi|170076851|ref|YP_001733489.1| DNA repair protein RadC [Synechococcus sp. PCC 7002] gi|229485573|sp|B1XM86|Y220_SYNP2 RecName: Full=UPF0758 protein SYNPCC7002_A0220 gi|169884520|gb|ACA98233.1| DNA repair protein RadC [Synechococcus sp. PCC 7002] Length = 243 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 54/94 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N LIA V + G + REI + ++ AT +I+ HNHPSGN +PS D+ Sbjct: 139 LCLDVKNTLIATRVVTIGLATETLAHPREIFREVIKHGATRLIIAHNHPSGNVDPSPEDL 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ ++ + L I + DH+I+G+D F S + Sbjct: 199 QLTERLLQSAQILGIPLLDHLILGRDNFGSLRQK 232 >gi|163858876|ref|YP_001633174.1| putative DNA repair protein [Bordetella petrii DSM 12804] gi|163262604|emb|CAP44907.1| putative DNA repair protein [Bordetella petrii] Length = 174 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD LI RGT+ PVY REI++ L +A +++ HNHPSG S AD Sbjct: 78 MLLDVQLRLITYLEPFRGTLSQAPVYPREILKLALRHNAAGLMMAHNHPSGLAEASQADR 137 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L +++ + DH I+ VS + Sbjct: 138 QLTQAVQQALALIDVRLLDHFIVAGTTVVSMAQRGQL 174 >gi|149199132|ref|ZP_01876171.1| DNA repair protein RadC [Lentisphaera araneosa HTCC2155] gi|149137729|gb|EDM26143.1| DNA repair protein RadC [Lentisphaera araneosa HTCC2155] Length = 169 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 6/103 (5%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N + SRG +D V RE+ + L A+ II+VHNHPSG PS D Sbjct: 59 LVLNTKNFITGYCEVSRGLVDRTHVACREVFRPALINGASKIIVVHNHPSGVLTPSHQDR 118 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG------KDAFVSFKGLRII 97 +T N+ L + V DH+I+G K F+SF+ + Sbjct: 119 TITNNLQEAGELLGVEVIDHLIVGYCLNKQKHHFLSFRQEGFM 161 >gi|313204670|ref|YP_004043327.1| DNA repair protein radc [Paludibacter propionicigenes WB4] gi|312443986|gb|ADQ80342.1| DNA repair protein RadC [Paludibacter propionicigenes WB4] Length = 233 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 47/94 (50%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L+ N +I + ++G V I +++ LE SA ++++ HNHPSG PS D Sbjct: 138 LLNGANKVIEIKRLTQGGSRQTVVDIPMLLKMALEKSALAVVVAHNHPSGQNRPSHEDEQ 197 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ I + I + DHIII K + SF Sbjct: 198 ITRKIKVGCEAIGITLLDHIIIAKGQYYSFADEG 231 >gi|255038888|ref|YP_003089509.1| DNA repair protein RadC [Dyadobacter fermentans DSM 18053] gi|254951644|gb|ACT96344.1| DNA repair protein RadC [Dyadobacter fermentans DSM 18053] Length = 234 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 48/95 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N ++ S G I I+ I + L+ A+S+ILVHNHPSG PS AD Sbjct: 138 LLLNRGNCVMRAVQVSVGGISGTATDIKMIFKIALDHMASSVILVHNHPSGQLVPSMADR 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T I L++ V DH+I D + SF Sbjct: 198 LLTSQIKEAGRLLDLPVLDHMIFTDDGYYSFLDSG 232 >gi|206901273|ref|YP_002250597.1| DNA repair protein [Dictyoglomus thermophilum H-6-12] gi|206740376|gb|ACI19434.1| DNA repair protein [Dictyoglomus thermophilum H-6-12] Length = 228 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +++D N ++ + ++G ++ V R+I + L+ ++ IIL HNHPSG+ PS+ D+ Sbjct: 132 IYMDIKNKCLSKRLIAKGDLNIVYASPRDIFKYALQENSAKIILAHNHPSGDLTPSEDDV 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ +I L I V DH+II + ++S K I Sbjct: 192 IFTKRLIEAGKILGIEVLDHLIIHNEDYLSLKEKNFI 228 >gi|260548778|ref|ZP_05823000.1| DNA repair protein [Acinetobacter sp. RUH2624] gi|260407946|gb|EEX01417.1| DNA repair protein [Acinetobacter sp. RUH2624] Length = 235 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 46/97 (47%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD I + G++ H V + + ++ L+ A +++ HNH G+ PS DI Sbjct: 131 LCLDAELRKIHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHTFGSAQPSREDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I + DH II + SF +++ Sbjct: 191 KLTKQLEQACQLLEIRLLDHFIISPEGSFSFAEQQLL 227 >gi|319789619|ref|YP_004151252.1| DNA repair protein RadC [Thermovibrio ammonificans HB-1] gi|317114121|gb|ADU96611.1| DNA repair protein RadC [Thermovibrio ammonificans HB-1] Length = 222 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 53/89 (59%) Query: 9 LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68 L+ ++G ++ + +E+ + + A ++IL HNHP+G+P+PS D+ +T+ +I Sbjct: 134 LLGIHEVAKGAVNAAAITPKEVFRPAVRDLAEAVILFHNHPNGDPSPSAQDLKVTERLIE 193 Query: 69 TLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 L I V DH+I+ ++ F SFKG ++ Sbjct: 194 AGKVLGIEVLDHLIVTEETFFSFKGEGLV 222 >gi|225851003|ref|YP_002731237.1| DNA repair protein RadC [Persephonella marina EX-H1] gi|225646279|gb|ACO04465.1| DNA repair protein RadC [Persephonella marina EX-H1] Length = 229 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+ + N L+ +E+ + G+++ V + R+I L +A IILVHNHP G+P PS DI Sbjct: 133 LYTNTMNQLLGEEIVAVGSLNIVNIKPRDIFIPALRYNAYGIILVHNHPEGSPEPSKEDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T I + + DHII+GK + SF +I Sbjct: 193 KFTGLIKDLSIKMGFELLDHIIVGKKGYFSFSSEGLI 229 >gi|325970526|ref|YP_004246717.1| DNA repair protein RadC [Spirochaeta sp. Buddy] gi|324025764|gb|ADY12523.1| DNA repair protein RadC [Spirochaeta sp. Buddy] Length = 227 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ + +++ V S G ++ V+ RE+ + AT+I++ HNHPSGN PS D Sbjct: 131 ICLNGAHEVLSVNVCSVGLVNRTLVHPREVFTEAVRQRATAIVVAHNHPSGNLQPSMEDK 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ + + L I + DH+I G++ ++S + Sbjct: 191 DVTRRLRQAGDILGIKILDHLIFGEEGYLSMLEGSL 226 >gi|313157187|gb|EFR56617.1| DNA repair protein RadC [Alistipes sp. HGB5] Length = 211 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N +I + S+G + V R I++R LEL AT +IL+HNHPSG S D Sbjct: 114 VYLTSSNRIIERQRVSQGGVQGTVVDHRLIIKRALELLATQLILIHNHPSGAAEASPQDK 173 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I +I + DHIII ++ SF +I Sbjct: 174 VLTERIAQAAALFDIRLLDHIIIAREGDFSFLREGLI 210 >gi|71908171|ref|YP_285758.1| DNA repair protein RadC [Dechloromonas aromatica RCB] gi|71847792|gb|AAZ47288.1| DNA repair protein RadC [Dechloromonas aromatica RCB] Length = 193 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD H+ LI E RGT+ VY RE+V+ L +A ++ L HNHPSG PS AD Sbjct: 97 IYLDAHHRLIEAEELFRGTLTQTSVYPREVVKGALTRNAAALALAHNHPSGEAEPSRADE 156 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + L+ +++ + DH I+ D VSF L +I Sbjct: 157 LLTQTLKSALSLVDVRIIDHFIVAGDKVVSFAELGLI 193 >gi|299536250|ref|ZP_07049563.1| DNA repair protein RadC [Lysinibacillus fusiformis ZC1] gi|298728236|gb|EFI68798.1| DNA repair protein RadC [Lysinibacillus fusiformis ZC1] Length = 174 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N +V G+++ V+ RE+++ L +A S I+ HNHPS +PS DI Sbjct: 78 LCLDTKNQPTCLQVVHIGSLNASIVHPREVLKPALLSNAASAIVAHNHPSNVSDPSPEDI 137 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I + DH+I+ D F S K + Sbjct: 138 EVTKRLVHAGEILGIDILDHLILCTDTFRSLKESGCM 174 >gi|294674886|ref|YP_003575502.1| DNA repair protein RadC [Prevotella ruminicola 23] gi|294471906|gb|ADE81295.1| DNA repair protein RadC [Prevotella ruminicola 23] Length = 229 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 47/95 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ LI +RG I V IR I++ + +AT ++ HNHPSG PS D Sbjct: 133 LLLNQQYRLIKKLRIARGGITATTVDIRLIIREAVLCNATQLVACHNHPSGGITPSKQDD 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T +I+ ++I DH+I+ + S+ Sbjct: 193 ELTISIMNACKLMDIHFADHVIVTDGHYYSYHEQG 227 >gi|320352278|ref|YP_004193617.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032] gi|320120780|gb|ADW16326.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032] Length = 159 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 55/86 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++A G+++ V+ REIV+ L L+A ++IL HNHPSG+ PS DI Sbjct: 62 LFLDGRHQVLAWRELFHGSVNRTTVHPREIVKEALRLNAAAVILAHNHPSGSTLPSSEDI 121 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKD 86 +T+ + L +++ V DH+I+G++ Sbjct: 122 ELTKALTEILAIIDVRVLDHLIVGEE 147 >gi|70608421|gb|AAZ04485.1| DNA repair protein RadC [Acetobacter aceti] Length = 147 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 44/97 (45%), Positives = 62/97 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ + L+AD++ +GT+DH PVY REIV R L+L AT ++LVHNHPSG+P PS D+ Sbjct: 51 LFLNDQHQLLADDIMGQGTVDHTPVYPREIVARALQLKATLLVLVHNHPSGDPTPSADDV 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT I +NI V DHII+ + + + + Sbjct: 111 VMTNQICGAAKIMNIHVWDHIIVAGEKLLCMREAGFL 147 >gi|312142482|ref|YP_003993928.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus'] gi|311903133|gb|ADQ13574.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus'] Length = 149 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 1/96 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD N L S G++ V RE+ +R L +A +++L HNHPSG+ + S DIN+ Sbjct: 54 LDAKNKLTGVFEVSIGSLTSSLVSPREVFKRALLQNAAAVVLGHNHPSGSIDFSSDDINI 113 Query: 63 TQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 T+ ++ + N L I V DHI+IG ++ + S K II Sbjct: 114 TKKLVKSGNILGIKVVDHIVIGSREDYESMKERGII 149 >gi|169350149|ref|ZP_02867087.1| hypothetical protein CLOSPI_00891 [Clostridium spiroforme DSM 1552] gi|169292932|gb|EDS75065.1| hypothetical protein CLOSPI_00891 [Clostridium spiroforme DSM 1552] Length = 225 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ ++ ++ G+ + + REI + L ++ I+++HNHPSGNP PS DI Sbjct: 127 LCLNSKLEVMKEKTVFIGSNNISIISGREIFKEALICGSSRIMVIHNHPSGNPKPSFEDI 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I + DH+IIG++ F SF II Sbjct: 187 EITKRLYRMAEELEIEIVDHLIIGRNKFYSFASKEII 223 >gi|295425103|ref|ZP_06817808.1| DNA repair protein RadC [Lactobacillus amylolyticus DSM 11664] gi|295065162|gb|EFG56065.1| DNA repair protein RadC [Lactobacillus amylolyticus DSM 11664] Length = 207 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L++D N ++A++ S+GT+D V+ R++ + + + SII+ HNHPSG PS +D+ Sbjct: 111 LYIDNGNHIVAEKKISQGTLDRSLVHPRDVFRWAVLFNCASIIVAHNHPSGKLMPSQSDL 170 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T ++I + I DH I+GK ++S K + Sbjct: 171 KLTDDLIKIAGLMKINFLDHFILGKGHYLSMKENEL 206 >gi|282881095|ref|ZP_06289782.1| putative DNA repair protein RadC [Prevotella timonensis CRIS 5C-B1] gi|281304899|gb|EFA96972.1| putative DNA repair protein RadC [Prevotella timonensis CRIS 5C-B1] Length = 259 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 44/95 (46%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L +++ LI S G I V +R I++ + +AT + L HNHPS PS D Sbjct: 162 LLMNQRYKLIKAMRISHGGISETAVDVRVIMREAVLSNATVLALCHNHPSNQAFPSTEDD 221 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ I + I DHII+ + S++ Sbjct: 222 RLTKRIHEASQLMRIYFLDHIIVTDGRYYSYREEG 256 >gi|302344315|ref|YP_003808844.1| DNA repair protein RadC [Desulfarculus baarsii DSM 2075] gi|301640928|gb|ADK86250.1| DNA repair protein RadC [Desulfarculus baarsii DSM 2075] Length = 241 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 46/97 (47%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD LIA E GTID VY RE+ L AT++ HNHPSG+ PS D Sbjct: 131 MLLDGRRRLIAIEDVFSGTIDRAVVYPREVAALALARGATALACAHNHPSGDATPSTDDR 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + + DHII+ SF + Sbjct: 191 AITRRLYYACQGVGLELVDHIIVAGRQLHSFAQSGFL 227 >gi|300867663|ref|ZP_07112308.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300334246|emb|CBN57480.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 243 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 49/93 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N L+ +V + GT + R+I + + AT I+ HNHPSGN PS DI Sbjct: 139 LLLDVKNRLLGTQVLTIGTATETLAHPRDIFREVIRQGATRAIVSHNHPSGNLEPSPEDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 +T+ ++ L I + DH+I+G F S + Sbjct: 199 ALTKQLLAGAQFLAIPLLDHLILGNGDFRSLRQ 231 >gi|160878328|ref|YP_001557296.1| DNA repair protein RadC [Clostridium phytofermentans ISDg] gi|160426994|gb|ABX40557.1| DNA repair protein RadC [Clostridium phytofermentans ISDg] Length = 156 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 50/95 (52%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + S GT++ + REI R L A II+VHNHPS + PS D+ + Sbjct: 62 LDMKCNPLGIFELSHGTVNSSLIMPREIFIRALLSGAVGIIIVHNHPSSDITPSKQDLLV 121 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I N + + + DHIIIG + + S K + ++ Sbjct: 122 TEKIAQAGNMIGVELLDHIIIGGNEYCSLKEMGVL 156 >gi|32472906|ref|NP_865900.1| hypothetical protein RB4105 [Rhodopirellula baltica SH 1] gi|32444143|emb|CAD73586.1| RadC [Rhodopirellula baltica SH 1] Length = 208 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 49/92 (53%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + +I + GT+D V+ RE+ + + + + ++L HNHPSG+P PS D + Sbjct: 115 LDTKHRMIDSHRITVGTLDASLVHPREVFRPAIRDACSCVLLAHNHPSGDPTPSREDFKV 174 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 TQ + + I DHI++ ++ +S + Sbjct: 175 TQQLTEVGKVIGITALDHIVLARENCLSLREQ 206 >gi|51244567|ref|YP_064451.1| DNA repair protein RadC [Desulfotalea psychrophila LSv54] gi|50875604|emb|CAG35444.1| related to DNA repair protein RadC [Desulfotalea psychrophila LSv54] Length = 249 Score = 109 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I E+ + G++ V+ RE++ + LE A ++I+ HNHPSG PS DI Sbjct: 137 VFLDSSHGIICSEIIAEGSLTVNTVHPRELLVKALEHHAAALIISHNHPSGALLPSPQDI 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + + I + DHIIIG A+ SF ++ Sbjct: 197 QLTRLLYFLCSSMQIQLLDHIIIGDGAY-SFADHGLM 232 >gi|255015794|ref|ZP_05287920.1| putative DNA repair protein [Bacteroides sp. 2_1_7] gi|262384073|ref|ZP_06077209.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262294971|gb|EEY82903.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 235 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 48/91 (52%) Query: 7 NILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNI 66 N +I S+G ++ V IR +++ + + A+ IIL HNHPSG+ PS D +T+ I Sbjct: 143 NKVIQKIKISQGGVNQTSVDIRLVLKAAINVLASGIILCHNHPSGSLRPSTHDDALTERI 202 Query: 67 ITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++I + DHII+ + S+ + Sbjct: 203 QKAAKLMDIRILDHIILSDSGYYSYADEGRL 233 >gi|262374189|ref|ZP_06067465.1| DNA repair protein [Acinetobacter junii SH205] gi|262310747|gb|EEY91835.1| DNA repair protein [Acinetobacter junii SH205] Length = 246 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 45/97 (46%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G+ V + + ++ ++ A I++ HNHP G PS+ DI Sbjct: 135 LCLDAELRKLHFKKLFYGSQHSCSVSLNQTLRYAIQQQACQIVVAHNHPYGIAQPSNEDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 TQ + + I + DH II D + SF +++ Sbjct: 195 YFTQQLKQACKLVEIHLIDHFIISPDGYFSFTEQQLL 231 >gi|218439039|ref|YP_002377368.1| DNA repair protein RadC [Cyanothece sp. PCC 7424] gi|226736619|sp|B7KF44|Y2073_CYAP7 RecName: Full=UPF0758 protein PCC7424_2073 gi|218171767|gb|ACK70500.1| DNA repair protein RadC [Cyanothece sp. PCC 7424] Length = 243 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 33/92 (35%), Positives = 52/92 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I ++ S GT V+ REI + L+ AT +I+ HNHPSGN PS DI Sbjct: 139 VLLNVKNQIIGTKLISIGTATETLVHPREIFREVLKQGATKLIIGHNHPSGNVAPSQEDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 ++T+ ++ LN + DH+I+G S + Sbjct: 199 DLTEQLLKAATFLNFPLLDHLILGNGNHQSLR 230 >gi|149924122|ref|ZP_01912501.1| DNA repair protein RadC [Plesiocystis pacifica SIR-1] gi|149815019|gb|EDM74577.1| DNA repair protein RadC [Plesiocystis pacifica SIR-1] Length = 260 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 52/95 (54%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD ++ + G++ V V+ RE+ + + A + +LVHNHPSG+ PS+ADI + Sbjct: 150 LDARQRVLLVRTIAVGSLTRVEVHPREVFRPLVRAGAHTCLLVHNHPSGDARPSEADIEL 209 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + L I V DH+++ + FVS L ++ Sbjct: 210 TARMTDIGRFLGIPVLDHVVVSANGFVSLAELGLV 244 >gi|16331325|ref|NP_442053.1| DNA repair protein RadC [Synechocystis sp. PCC 6803] gi|1710004|sp|P52601|Y766_SYNY3 RecName: Full=UPF0758 protein sll0766 gi|1001498|dbj|BAA10123.1| RadC protein [Synechocystis sp. PCC 6803] Length = 243 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 51/93 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N L+A +V + GT ++ REI + ++ AT +I+ HNHPSG PS DI Sbjct: 139 VMLDVKNRLLATKVITIGTATETLIHPREIFREVIKQGATRLIVAHNHPSGGLEPSPEDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 +T+ ++ L I V DH+I+G S + Sbjct: 199 RLTEFLLQGAQYLQIPVLDHLILGHGKHQSLRQ 231 >gi|312892247|ref|ZP_07751743.1| DNA replication and repair protein RadC [Mucilaginibacter paludis DSM 18603] gi|311295222|gb|EFQ72395.1| DNA replication and repair protein RadC [Mucilaginibacter paludis DSM 18603] Length = 232 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + ++K N +I + S+G + + I Q LE A S+IL HNHPSGN PS D+ Sbjct: 136 MLMNKGNKIIGTHLISKGGLATTIADPKIIFQISLEHHAASVILAHNHPSGNLKPSAEDL 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ II L+I + DHIII A+ SF ++ Sbjct: 196 SLTKKIIAGGKLLDITIFDHIIITDQAYYSFADEGVL 232 >gi|325298868|ref|YP_004258785.1| DNA repair protein RadC [Bacteroides salanitronis DSM 18170] gi|324318421|gb|ADY36312.1| DNA repair protein RadC [Bacteroides salanitronis DSM 18170] Length = 229 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ + +I S+G + V +R I++ L A S+++ HNHPSG+ PS D Sbjct: 133 LLLNQSSKVIDRMRISQGGLAATQVDVRCILREALLKRAVSLVVCHNHPSGSTVPSSDDD 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + +NI + DH+I+ A+ S+ + Sbjct: 193 RLTQAVRQAAATMNIRLLDHLIVTDGAYYSYSDEGKL 229 >gi|198274552|ref|ZP_03207084.1| hypothetical protein BACPLE_00704 [Bacteroides plebeius DSM 17135] gi|198272606|gb|EDY96875.1| hypothetical protein BACPLE_00704 [Bacteroides plebeius DSM 17135] Length = 229 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ +I SRG + V +R I++ L ATS+IL HNHPSGN PS D Sbjct: 133 MLLNQAAKVIDTVKISRGGLASTQVDVRCILREALLKRATSMILCHNHPSGNIRPSQDDD 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++ +NI + DH+++ + S+ + Sbjct: 193 RLTHALLEAARTMNIRLLDHVVVSDGDYYSYGDEGRL 229 >gi|88603975|ref|YP_504153.1| DNA repair protein RadC [Methanospirillum hungatei JF-1] gi|121721483|sp|Q2FT43|Y2739_METHJ RecName: Full=UPF0758 protein Mhun_2739 gi|88189437|gb|ABD42434.1| DNA replication and repair protein RadC [Methanospirillum hungatei JF-1] Length = 225 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 49/95 (51%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + +I + G ++H V+ RE+ + A +II +HNHPSGNP PS DI + Sbjct: 131 LNGASEVICTRTITMGLLNHSLVHPREVFADAITDRAAAIICIHNHPSGNPEPSSEDITV 190 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L I + DH+I K S + L + Sbjct: 191 TRQLSEAGKILGISLLDHLIYTKGKVTSLRSLGYL 225 >gi|303241410|ref|ZP_07327913.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2] gi|302591019|gb|EFL60764.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2] Length = 178 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 57/96 (59%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FLDK N +I +V S G+I VY R +++ L+ S+I+ HNHP G+ PS D Sbjct: 30 FLDKGNNVIETKVLSEGSIGEAVVYPRAVLKAALDCDCKSMIVAHNHPGGSMVPSLQDKE 89 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ +++ PL I V DHII+ ++++S + +I Sbjct: 90 ITQILVSIFTPLQINVLDHIIVANNSYLSMEERGMI 125 >gi|295135957|ref|YP_003586633.1| DNA repair protein [Zunongwangia profunda SM-A87] gi|294983972|gb|ADF54437.1| putative DNA repair protein [Zunongwangia profunda SM-A87] Length = 149 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N + S G I V +R + L+ T++IL+HNHPSG PS+AD Sbjct: 52 LLLNNANKVKGIYEVSNGGITGTLVDVRILFAVLLKSLTTAVILLHNHPSGTLKPSEADK 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 +TQ I +I V DH+I+ + + SF I+ Sbjct: 112 RLTQKIKKAGELFDIKVLDHLILSPEGDYYSFADNGIL 149 >gi|217971586|ref|YP_002356337.1| DNA repair protein RadC [Shewanella baltica OS223] gi|217496721|gb|ACK44914.1| DNA repair protein RadC [Shewanella baltica OS223] Length = 163 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + L+ + GT+D VY RE+V+ L ++A ++I HNHPSG PS AD Sbjct: 68 MLLDNQHQLLEFKELFFGTLDAASVYPREVVKAVLAVNAAAVIFAHNHPSGESEPSTADK 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ + L +++ V DHI++G+ VSF ++ Sbjct: 128 NITKRLTDALGLIDVRVLDHIVVGR-TPVSFAERGLL 163 >gi|112789947|gb|ABI21617.1| Smu18B [uncultured organism] Length = 154 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 57/95 (60%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + +IA + +RG + V+ RE+ + + + A +II+ HNHPSG+P PS D + Sbjct: 60 LNAQHRMIALQEVTRGIQNCSLVHPREVFRIAIAIGAAAIIVAHNHPSGDPAPSADDRAV 119 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ L++ VHDHII+G ++ SF ++ Sbjct: 120 TEQLVAAGRLLDLPVHDHIIVGAGSYTSFAEAGLL 154 >gi|224024775|ref|ZP_03643141.1| hypothetical protein BACCOPRO_01503 [Bacteroides coprophilus DSM 18228] gi|224017997|gb|EEF76009.1| hypothetical protein BACCOPRO_01503 [Bacteroides coprophilus DSM 18228] Length = 147 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ N L+ S+ I V +R I+Q L A+ IIL HNHPSGN S D Sbjct: 51 MFLNQANRLLGLSCISKCGISQTVVDVRIILQTALLAHASGIILSHNHPSGNMVASSNDN 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L+I + DHII+ ++S+ ++ Sbjct: 111 AITSKLKKACELLDITLLDHIILSDTGYLSYADEGML 147 >gi|296389000|ref|ZP_06878475.1| DNA repair protein RadC [Pseudomonas aeruginosa PAb1] Length = 82 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 36/82 (43%), Positives = 50/82 (60%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FLD + LI GTID V+ RE+V++ L L+A ++I+ HNHPSGNP PS AD Sbjct: 1 FLDTRHRLIDYVEMFHGTIDAAEVHPREVVKQALRLNAAAVIVSHNHPSGNPEPSAADKA 60 Query: 62 MTQNIITTLNPLNIIVHDHIII 83 MT + L +++ DHII+ Sbjct: 61 MTSQLRQALALVDVRTLDHIIV 82 >gi|319937413|ref|ZP_08011820.1| hypothetical protein HMPREF9488_02656 [Coprobacillus sp. 29_1] gi|319807779|gb|EFW04372.1| hypothetical protein HMPREF9488_02656 [Coprobacillus sp. 29_1] Length = 226 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 54/96 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N +I + G+++ V RE+ + + +S+ +IL+HNHPSG+ PS D+ Sbjct: 125 LCLDIRNRVIKKKTIFIGSLNMSIVTPREVFKEAIGVSSAKMILLHNHPSGDALPSQEDL 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + + I + DHIIIG + F S K ++ Sbjct: 185 YLTEQFVKLGEMMAIEIMDHIIIGWNQFYSIKAKQL 220 >gi|260363782|ref|ZP_05776542.1| DNA repair protein RadC [Vibrio parahaemolyticus K5030] gi|308113336|gb|EFO50876.1| DNA repair protein RadC [Vibrio parahaemolyticus K5030] Length = 203 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 34/76 (44%), Positives = 48/76 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + +I DE+ GT+D VY RE+V+R L +A ++IL HNHPSG PS AD Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187 Query: 61 NMTQNIITTLNPLNII 76 +T+ +I L ++I Sbjct: 188 RITRRLIDALALVDIR 203 >gi|158337489|ref|YP_001518664.1| DNA repair protein RadC [Acaryochloris marina MBIC11017] gi|229485543|sp|B0CEV0|Y4368_ACAM1 RecName: Full=UPF0758 protein AM1_4368 gi|158307730|gb|ABW29347.1| DNA repair protein RadC [Acaryochloris marina MBIC11017] Length = 243 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 50/93 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + L+ +V S GT + R+I + + AT I+ HNHPSG +PS D+ Sbjct: 139 LLLDVKHRLLGTQVVSIGTATETLAHPRDIFREIIRKGATRAIVAHNHPSGQTDPSPEDL 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 +TQ +++ L + + DH+I+G F S + Sbjct: 199 ELTQQLLSGAQILGLPLLDHLILGNGDFTSLRQ 231 >gi|302871177|ref|YP_003839813.1| DNA repair protein RadC [Caldicellulosiruptor obsidiansis OB47] gi|302574036|gb|ADL41827.1| DNA repair protein RadC [Caldicellulosiruptor obsidiansis OB47] Length = 230 Score = 108 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD +I GT+ VY R++V+ + +A+S+IL HNHP G+ PS DI Sbjct: 129 ICLDTQLNVIYSAPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N TQ I+ L+ + + V+DH I+ D + SF I+ Sbjct: 189 NTTQKIVNALSTIGVTVNDHFIVAGDKYYSFAQNGIL 225 >gi|189501561|ref|YP_001957278.1| DNA repair protein RadC [Candidatus Amoebophilus asiaticus 5a2] gi|189497002|gb|ACE05549.1| DNA repair protein RadC [Candidatus Amoebophilus asiaticus 5a2] Length = 243 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 34/92 (36%), Positives = 51/92 (55%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L + N +I + S G + V + I + ++ A SIILVHNHPS NP PS+ DI + Sbjct: 148 LTRANYVIKKHLISSGGTAQLAVDPKVIFKTAIDHHAASIILVHNHPSNNPKPSELDIQL 207 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ ++ L+I + DHII +D + SF Sbjct: 208 TERLVKGGKILDIPILDHIIFTEDTYFSFADE 239 >gi|157961087|ref|YP_001501121.1| DNA repair protein RadC [Shewanella pealeana ATCC 700345] gi|157846087|gb|ABV86586.1| DNA repair protein RadC [Shewanella pealeana ATCC 700345] Length = 158 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + LI GT+D VY RE+V+ L ++A ++IL HNHPSG PS AD Sbjct: 63 MMLDNQHRLIEFNELFFGTVDAASVYPREVVKAVLAVNAAAVILAHNHPSGEAEPSQADK 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ V DHI++GK VSF ++ Sbjct: 123 LITKRLTDALALIDVRVLDHIVVGK-TPVSFTERGLL 158 >gi|145308125|gb|ABP57311.1| hypothetical protein bst038 [Bacteroides uniformis] Length = 147 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ N L+ S+ I V +R I+Q L A+ IIL HNHPSGN S +D Sbjct: 51 MFLNQANRLLGLSCISKCGISQTVVDVRIILQTALLAHASGIILSHNHPSGNMVASSSDN 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L+I + DHII+ ++S+ ++ Sbjct: 111 ALTSKLKKACEILDITLLDHIILSDTGYLSYADEGML 147 >gi|319641253|ref|ZP_07995952.1| hypothetical protein HMPREF9011_01549 [Bacteroides sp. 3_1_40A] gi|317387126|gb|EFV68006.1| hypothetical protein HMPREF9011_01549 [Bacteroides sp. 3_1_40A] Length = 147 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ N L+ S+ I V +R I+Q L A+ IIL HNHPSGN S +D Sbjct: 51 MFLNQANRLLGLSCISKCGISQTVVDVRIILQTALLAHASGIILSHNHPSGNMVASSSDN 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L+I + DHII+ ++S+ ++ Sbjct: 111 AITSKLKKACEILDITLLDHIILSDTGYLSYADEGML 147 >gi|301027702|ref|ZP_07191015.1| DNA repair protein RadC domain protein [Escherichia coli MS 196-1] gi|299879172|gb|EFI87383.1| DNA repair protein RadC domain protein [Escherichia coli MS 196-1] Length = 80 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 50/80 (62%) Query: 18 GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77 GTI+ V+ RE+++R L +A +++L HNHPSG PS AD +T+ ++ L ++I V Sbjct: 1 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALALVDIRV 60 Query: 78 HDHIIIGKDAFVSFKGLRII 97 DH+I+G + SF ++ Sbjct: 61 PDHLIVGGNQVFSFAEHGLL 80 >gi|262371119|ref|ZP_06064441.1| DNA repair protein [Acinetobacter johnsonii SH046] gi|262314005|gb|EEY95050.1| DNA repair protein [Acinetobacter johnsonii SH046] Length = 235 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD H I + G ++ + I ++++ C+ AT +++ HNHP G PS ADI Sbjct: 131 LCLDAHLRKINFKKLFFGAVNSCEISINQLLRYCIAQHATFMVIAHNHPLGKAQPSTADI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ ++I + DH I+ + SF +I Sbjct: 191 ELTERILQASQLVDIQLIDHFILSPEGAFSFAEHGLI 227 >gi|227499946|ref|ZP_03930039.1| DNA repair protein RadC [Anaerococcus tetradius ATCC 35098] gi|227218055|gb|EEI83328.1| DNA repair protein RadC [Anaerococcus tetradius ATCC 35098] Length = 228 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 43/95 (45%), Positives = 60/95 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N++IA + S G + V RE+ ++ ++ SA S+I+VHNHPSGNPNPS D Sbjct: 132 ILLDTKNVIIAKDFVSMGDLSSTIVNPREVFKKAIKKSAKSMIIVHNHPSGNPNPSREDF 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + + L+I V DHIIIGKD F SFK Sbjct: 192 AITKRLADSGELLDIEVLDHIIIGKDCFYSFKKEG 226 >gi|313672322|ref|YP_004050433.1| DNA repair protein radc [Calditerrivibrio nitroreducens DSM 19672] gi|312939078|gb|ADR18270.1| DNA repair protein RadC [Calditerrivibrio nitroreducens DSM 19672] Length = 222 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ +I EV GT++ V++RE+ + L+ A +I+ HNHPSG PS D Sbjct: 126 ILLNSAGNVIDWEVLFNGTVNCSQVHVREVAEYALKNKAVGVIVAHNHPSGKLEPSKDDR 185 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T I L+ +I + DH+++ ++SFK Sbjct: 186 EITIKIKKALDLFDINLLDHVLVTPYGYLSFKER 219 >gi|282879368|ref|ZP_06288111.1| putative DNA repair protein RadC [Prevotella buccalis ATCC 35310] gi|281298481|gb|EFA90907.1| putative DNA repair protein RadC [Prevotella buccalis ATCC 35310] Length = 249 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 47/97 (48%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L ++++ LI S G I V +R I++ + +AT + L HNHPS N PS D Sbjct: 153 LLMNQNFKLIKSVRISHGGISETAVDVRVIMREAVLCNATVLALCHNHPSNNTTPSSDDD 212 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + I DHIII + S++ + Sbjct: 213 RLTKRVKQAAETMRIYFLDHIIITDGRYYSYREEGRL 249 >gi|325280908|ref|YP_004253450.1| DNA repair protein RadC [Odoribacter splanchnicus DSM 20712] gi|324312717|gb|ADY33270.1| DNA repair protein RadC [Odoribacter splanchnicus DSM 20712] Length = 238 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N + E S G +D + +R + + L++ AT I++ HNHP G+ PS D Sbjct: 135 IYLTHSNQVKGCECLSSGGMDGTVIDVRLLFRGALDMKATYIVIAHNHPGGSLVPSTYDE 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I L+I ++DHII+G++A+ SF + Sbjct: 195 LITRKIYEGGQLLDIKLYDHIIVGENAYYSFADEGKL 231 >gi|227529675|ref|ZP_03959724.1| DNA repair protein RadC [Lactobacillus vaginalis ATCC 49540] gi|227350465|gb|EEJ40756.1| DNA repair protein RadC [Lactobacillus vaginalis ATCC 49540] Length = 212 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 3/97 (3%) Query: 1 LFL---DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSD 57 L+L D HN +I + G + VY + +R L SA I +VHNHPSGN PS Sbjct: 105 LYLVGTDVHNDIIDIKKMFVGGLSECSVYPDRVFRRALLQSANGIAVVHNHPSGNVEPSS 164 Query: 58 ADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 ADI M + + L I D +I+G++++ S++ Sbjct: 165 ADIAMIKRLEKGSRILGITFLDFLIVGRNSYYSWREN 201 >gi|225378107|ref|ZP_03755328.1| hypothetical protein ROSEINA2194_03767 [Roseburia inulinivorans DSM 16841] gi|225210108|gb|EEG92462.1| hypothetical protein ROSEINA2194_03767 [Roseburia inulinivorans DSM 16841] Length = 230 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 45/96 (46%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 D + D V + G++ V REI LE A I++VHNHPSG PS D Sbjct: 134 MFDSKCKWLGDSVVTTGSVSSSIVPPREIFICALEKKAVHIVMVHNHPSGRAVPSGEDNT 193 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L I + DHIIIG + S++ + Sbjct: 194 VTARIAEAGKLLGIALSDHIIIGDRTYFSYREAGYL 229 >gi|50086129|ref|YP_047639.1| DNA repair protein, associated with replication forks [Acinetobacter sp. ADP1] gi|54036221|sp|Q6F7Z8|Y3126_ACIAD RecName: Full=UPF0758 protein ACIAD3126 gi|49532105|emb|CAG69817.1| DNA repair protein, associated with replication forks [Acinetobacter sp. ADP1] Length = 271 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 46/97 (47%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G+++ + I ++ L+ A I++ HNHP G PS AD+ Sbjct: 146 LCLDSELRKLNFKKLFYGSLNACNISINHTLRYALQQHACHIVIAHNHPFGKAEPSAADL 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T + + I + DH II KD SF ++ Sbjct: 206 DLTHQLYQACQLVEIKLLDHFIIAKDGTFSFAERALL 242 >gi|301061025|ref|ZP_07201822.1| DNA repair protein RadC domain protein [delta proteobacterium NaphS2] gi|300444819|gb|EFK08787.1| DNA repair protein RadC domain protein [delta proteobacterium NaphS2] Length = 169 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N ++ E GT+ VY REI++R L L A +++LVHNHPS + PS D Sbjct: 61 IFLDIRNHILGIEKMFTGTLSSSAVYPREIIKRLLALKAGAVVLVHNHPSRHTEPSGEDR 120 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++ ++HDHII+G D + SF I+ Sbjct: 121 VLTRKVALALTAVDALLHDHIIVGDD-YYSFSEKGIM 156 >gi|303241972|ref|ZP_07328465.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2] gi|302590527|gb|EFL60282.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2] Length = 142 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 53/95 (55%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L +N++ + S GT+ PV+ RE+ + + ++ +II+ HNHP G NPS ADI + Sbjct: 48 LGTNNVINCVQTVSIGTLSEAPVHPREVFKIAILSNSLNIIIAHNHPGGTLNPSKADIEL 107 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I L+I V DHII+ + SF ++ Sbjct: 108 TEEIKKAGELLHIPVIDHIIVTDTNYYSFAENGLL 142 >gi|117923573|ref|YP_864190.1| DNA repair protein RadC [Magnetococcus sp. MC-1] gi|117607329|gb|ABK42784.1| DNA repair protein RadC [Magnetococcus sp. MC-1] Length = 241 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD L+ + + GTI V+ R++V+ + A +IL HNHPSGNP S DI Sbjct: 139 LCLDAQCRLLFPALVTEGTIRQAHVHPRQVVELVIRHKAAHVILAHNHPSGNPKASQDDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +++ LNP+++ V DH+II + SF ++ Sbjct: 199 LLTSHLMQALNPIDVQVLDHLIIAGEKVFSFASAGMM 235 >gi|302339965|ref|YP_003805171.1| DNA repair protein RadC [Spirochaeta smaragdinae DSM 11293] gi|301637150|gb|ADK82577.1| DNA repair protein RadC [Spirochaeta smaragdinae DSM 11293] Length = 227 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 49/92 (53%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + +I + S G ++ V+ REI C++ A ++I HNHPSGN PS D + Sbjct: 131 LNGAHEVIKLRIISVGLVNRTLVHPREIFAGCVKDRAAALICAHNHPSGNLQPSAEDHEV 190 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T+ + + L I + DHII ++ + SF Sbjct: 191 TRRLTASGEILGIPLIDHIIFTQEGYYSFLEH 222 >gi|197105875|ref|YP_002131252.1| DNA repair protein RadC [Phenylobacterium zucineum HLK1] gi|196479295|gb|ACG78823.1| DNA repair protein RadC [Phenylobacterium zucineum HLK1] Length = 256 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 61/97 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD +DE RGT+DH PVY+RE+++ L A +++LVHNHPSG+P PS AD+ Sbjct: 159 IFLDASGAWSSDEELGRGTVDHAPVYVREVMREALRRDAAALVLVHNHPSGDPTPSAADV 218 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I + L + V DH+++G SF+ L ++ Sbjct: 219 QVTSEIAAAASALGMSVKDHLVVGSHGVASFQALGLL 255 >gi|312134462|ref|YP_004001800.1| DNA repair protein radc [Caldicellulosiruptor owensensis OL] gi|311774513|gb|ADQ04000.1| DNA repair protein RadC [Caldicellulosiruptor owensensis OL] Length = 230 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD +I GT+ VY R++V+ + +A+S+IL HNHP G+ PS DI Sbjct: 129 ICLDTQLNVIYSAPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSIRPSMDDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 TQ I+ L+ + + V+DH I+ D + SF I+ Sbjct: 189 KTTQKIVNALSTIGVAVNDHFIVAGDKYYSFAQNGIL 225 >gi|262281059|ref|ZP_06058841.1| DNA repair protein [Acinetobacter calcoaceticus RUH2202] gi|262257290|gb|EEY76026.1| DNA repair protein [Acinetobacter calcoaceticus RUH2202] Length = 239 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 47/97 (48%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G++ H V + + ++ L+ A +++ HNHP G+ PS DI Sbjct: 135 LCLDPELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSAQPSAEDI 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I + DH II + SF +++ Sbjct: 195 ALTQQLEHACQLVEIRLLDHFIISPEGSFSFAEQQLL 231 >gi|220919048|ref|YP_002494352.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-1] gi|219956902|gb|ACL67286.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-1] Length = 235 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 48/95 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD L+ + G++ PV R+ ++ + A ++ VHNHPSG+P PS D+ Sbjct: 137 VLLDVRGRLLRAVQVAEGSLSQCPVSPRDALRPAVREGAHGVVFVHNHPSGDPTPSPDDV 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 ++T + + + ++ DH+I+ + SF Sbjct: 197 DLTARLRAAADLVGVLARDHVIVAAGGYYSFVEAG 231 >gi|254196814|ref|ZP_04903238.1| DNA repair protein RadC [Burkholderia pseudomallei S13] gi|169653557|gb|EDS86250.1| DNA repair protein RadC [Burkholderia pseudomallei S13] Length = 283 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 187 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 246 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G SF I Sbjct: 247 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 283 >gi|301029681|ref|ZP_07192738.1| DNA repair protein RadC domain protein [Escherichia coli MS 196-1] gi|299877451|gb|EFI85662.1| DNA repair protein RadC domain protein [Escherichia coli MS 196-1] Length = 80 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 50/80 (62%) Query: 18 GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77 GTI+ V+ RE+++R L +A +++L HNHPSG PS AD +T+ ++ L ++I V Sbjct: 1 GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 60 Query: 78 HDHIIIGKDAFVSFKGLRII 97 DH+I+G + SF ++ Sbjct: 61 PDHLIVGGNQVFSFAEHGLL 80 >gi|86159682|ref|YP_466467.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-C] gi|85776193|gb|ABC83030.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-C] Length = 203 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 49/95 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD LI E ++G++ PV R+ ++ + A ++ VHNHPSG+P+ S D Sbjct: 106 VLLDVRGRLIRTERVAQGSVSQCPVSPRDTLRVAVREGAHGVVFVHNHPSGDPSASVEDA 165 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 ++T+ + + ++ DH+I+ + SF Sbjct: 166 DLTERLTAAAELVGVVARDHVIVATGGYFSFVQAG 200 >gi|56750332|ref|YP_171033.1| DNA repair protein RadC [Synechococcus elongatus PCC 6301] gi|81300036|ref|YP_400244.1| DNA repair protein RadC [Synechococcus elongatus PCC 7942] gi|56685291|dbj|BAD78513.1| DNA repair protein RadC [Synechococcus elongatus PCC 6301] gi|81168917|gb|ABB57257.1| DNA repair protein RadC [Synechococcus elongatus PCC 7942] Length = 244 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 52/93 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + L+A V + GT REI + L L AT +I+ HNHPSG +PS AD+ Sbjct: 140 LLLDVRHNLLAQRVLTIGTATETLANPREIFREALRLGATRLIVAHNHPSGQVDPSSADL 199 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 ++T+ ++ L + V DH+I+G+ S + Sbjct: 200 SLTEQLLQLGQALELPVLDHLILGQGHHRSLRD 232 >gi|110637898|ref|YP_678105.1| DNA repair protein [Cytophaga hutchinsonii ATCC 33406] gi|110280579|gb|ABG58765.1| DNA replication and repair protein RadC [Cytophaga hutchinsonii ATCC 33406] Length = 233 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 47/97 (48%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N + S G + V + I + LE A+ IIL+HNHPSGN PS +D Sbjct: 137 LLLNCDNRIEKKIRISTGGVSATIVDPKLIYKYALENLASYIILIHNHPSGNTKPSQSDY 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ + L V DH+II + SF I Sbjct: 197 NLTKKLCEAGAFLETPVLDHVIICNHTWYSFADEGKI 233 >gi|325280673|ref|YP_004253215.1| DNA repair protein RadC [Odoribacter splanchnicus DSM 20712] gi|324312482|gb|ADY33035.1| DNA repair protein RadC [Odoribacter splanchnicus DSM 20712] Length = 165 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ +I S+G ++H V +R I Q L AT ILVHNHP+G +PS D Sbjct: 68 ILLNSCMQIIGSSQVSKGGLEHAFVDVRIIYQTALMAHATGFILVHNHPTGVLHPSKPDE 127 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I+ L+I + DH+II +D + SF II Sbjct: 128 ELTKKIVGAGKILDIRLLDHLIISEDTYFSFADEGII 164 >gi|307718970|ref|YP_003874502.1| DNA repair protein RadC [Spirochaeta thermophila DSM 6192] gi|306532695|gb|ADN02229.1| DNA repair protein RadC [Spirochaeta thermophila DSM 6192] gi|315186457|gb|EFU20217.1| DNA repair protein RadC [Spirochaeta thermophila DSM 6578] Length = 218 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 47/95 (49%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ LIA V S G ++ + RE+ + A SII+ HNHPSG+ PS D + Sbjct: 124 LNGAQELIALRVVSVGLVNRALTHPREVFADPIADRAASIIVAHNHPSGSLTPSVEDQEV 183 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L I + DHI+ + ++S K + Sbjct: 184 TRRLKEAGEILGIPLLDHIVFSQKGYLSLKQAGYL 218 >gi|262377394|ref|ZP_06070617.1| DNA repair protein [Acinetobacter lwoffii SH145] gi|262307624|gb|EEY88764.1| DNA repair protein [Acinetobacter lwoffii SH145] Length = 232 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD IA + G+I+ + I ++++ + ATSI++ HNHP G P+PS AD+ Sbjct: 130 LCLDASLRKIAFKKLFYGSINACDISINQLLRYAISQQATSIVIAHNHPLGRPSPSKADL 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ I ++I + DH II + SF ++I Sbjct: 190 VLTRQIQQACQLVDIHLIDHCIIALEGSFSFAEQQLI 226 >gi|53718558|ref|YP_107544.1| DNA repair protein RadC [Burkholderia pseudomallei K96243] gi|251766710|ref|ZP_04819773.1| DNA repair protein RadC [Burkholderia mallei PRL-20] gi|52208972|emb|CAH34911.1| putative DNA repair protein [Burkholderia pseudomallei K96243] gi|243064993|gb|EES47179.1| DNA repair protein RadC [Burkholderia mallei PRL-20] Length = 236 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 140 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 199 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G SF I Sbjct: 200 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 236 >gi|197124274|ref|YP_002136225.1| DNA repair protein RadC [Anaeromyxobacter sp. K] gi|196174123|gb|ACG75096.1| DNA repair protein RadC [Anaeromyxobacter sp. K] Length = 235 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 49/95 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD L+ + G++ PV R+ ++ + A ++ VHNHPSG+P+PS D+ Sbjct: 137 VLLDVRGRLLRAVQVAEGSLSQCPVSPRDALRPAVREGAHGVVFVHNHPSGDPSPSPDDM 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 ++T + + + ++ DH+I+ + SF Sbjct: 197 DLTARLRAAADLVGVLARDHVIVAAGGYYSFVEAG 231 >gi|288925176|ref|ZP_06419111.1| DNA repair protein RadC [Prevotella buccae D17] gi|315607385|ref|ZP_07882384.1| DNA repair protein RadC [Prevotella buccae ATCC 33574] gi|288337941|gb|EFC76292.1| DNA repair protein RadC [Prevotella buccae D17] gi|315250942|gb|EFU30932.1| DNA repair protein RadC [Prevotella buccae ATCC 33574] Length = 255 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L ++++ LI + S G I + +R IV+ L +AT + HNHPS N PS D Sbjct: 159 LLMNQNYKLIKAQRISHGGISETAIDVRIIVKEALLCNATILAFCHNHPSNNTTPSRQDD 218 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQN+ + + I + DH+I+ A+ S++ I Sbjct: 219 QLTQNVKKACDFMRIYLIDHVIVTDGAYYSYREQGRI 255 >gi|53726241|ref|YP_103794.1| DNA repair protein RadC [Burkholderia mallei ATCC 23344] gi|76809094|ref|YP_332551.1| DNA repair protein RadC [Burkholderia pseudomallei 1710b] gi|121598892|ref|YP_993943.1| DNA repair protein RadC [Burkholderia mallei SAVP1] gi|124383479|ref|YP_001027007.1| DNA repair protein RadC [Burkholderia mallei NCTC 10229] gi|126449373|ref|YP_001081630.1| DNA repair protein RadC [Burkholderia mallei NCTC 10247] gi|126455030|ref|YP_001065265.1| DNA repair protein RadC [Burkholderia pseudomallei 1106a] gi|134281216|ref|ZP_01767925.1| DNA repair protein RadC [Burkholderia pseudomallei 305] gi|217419932|ref|ZP_03451438.1| DNA repair protein RadC [Burkholderia pseudomallei 576] gi|226194411|ref|ZP_03790009.1| DNA repair protein RadC [Burkholderia pseudomallei Pakistan 9] gi|238562657|ref|ZP_00440036.2| DNA repair protein RadC [Burkholderia mallei GB8 horse 4] gi|242316183|ref|ZP_04815199.1| DNA repair protein RadC [Burkholderia pseudomallei 1106b] gi|254175496|ref|ZP_04882156.1| DNA repair protein RadC [Burkholderia mallei ATCC 10399] gi|254190872|ref|ZP_04897379.1| DNA repair protein RadC [Burkholderia pseudomallei Pasteur 52237] gi|254202496|ref|ZP_04908859.1| DNA repair protein RadC [Burkholderia mallei FMH] gi|254207831|ref|ZP_04914181.1| DNA repair protein RadC [Burkholderia mallei JHU] gi|254356274|ref|ZP_04972550.1| DNA repair protein RadC [Burkholderia mallei 2002721280] gi|81604404|sp|Q62HM6|Y2230_BURMA RecName: Full=UPF0758 protein BMA2230 gi|123599994|sp|Q3JV52|Y1139_BURP1 RecName: Full=UPF0758 protein BURPS1710b_1139 gi|171769294|sp|A1V6U0|Y4446_BURMS RecName: Full=UPF0758 protein BMASAVP1_A2646 gi|171769824|sp|A2S4Y8|Y3320_BURM9 RecName: Full=UPF0758 protein BMA10229_A1020 gi|171855041|sp|A3MMZ4|Y4599_BURM7 RecName: Full=UPF0758 protein BMA10247_2099 gi|171855119|sp|A3NSE4|Y984_BURP0 RecName: Full=UPF0758 protein BURPS1106A_0984 gi|52429664|gb|AAU50257.1| DNA repair protein RadC [Burkholderia mallei ATCC 23344] gi|76578547|gb|ABA48022.1| DNA repair protein RadC [Burkholderia pseudomallei 1710b] gi|121227702|gb|ABM50220.1| DNA repair protein RadC [Burkholderia mallei SAVP1] gi|124291499|gb|ABN00768.1| DNA repair protein RadC [Burkholderia mallei NCTC 10229] gi|126228672|gb|ABN92212.1| DNA repair protein RadC [Burkholderia pseudomallei 1106a] gi|126242243|gb|ABO05336.1| DNA repair protein RadC [Burkholderia mallei NCTC 10247] gi|134247522|gb|EBA47607.1| DNA repair protein RadC [Burkholderia pseudomallei 305] gi|147746743|gb|EDK53820.1| DNA repair protein RadC [Burkholderia mallei FMH] gi|147751725|gb|EDK58792.1| DNA repair protein RadC [Burkholderia mallei JHU] gi|148025271|gb|EDK83425.1| DNA repair protein RadC [Burkholderia mallei 2002721280] gi|157938547|gb|EDO94217.1| DNA repair protein RadC [Burkholderia pseudomallei Pasteur 52237] gi|160696540|gb|EDP86510.1| DNA repair protein RadC [Burkholderia mallei ATCC 10399] gi|217397236|gb|EEC37252.1| DNA repair protein RadC [Burkholderia pseudomallei 576] gi|225933496|gb|EEH29485.1| DNA repair protein RadC [Burkholderia pseudomallei Pakistan 9] gi|238522151|gb|EEP85597.1| DNA repair protein RadC [Burkholderia mallei GB8 horse 4] gi|242139422|gb|EES25824.1| DNA repair protein RadC [Burkholderia pseudomallei 1106b] Length = 278 Score = 107 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 182 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 241 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G SF I Sbjct: 242 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 278 >gi|257139989|ref|ZP_05588251.1| DNA repair protein RadC [Burkholderia thailandensis E264] Length = 267 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 171 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 230 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ + DH ++G + SF I Sbjct: 231 HLTRVLRDALALVDVQLIDHFVVGANDTFSFAQAGWI 267 >gi|83719104|ref|YP_441337.1| DNA repair protein RadC [Burkholderia thailandensis E264] gi|123537846|sp|Q2T0G2|Y781_BURTA RecName: Full=UPF0758 protein BTH_I0781 gi|83652929|gb|ABC36992.1| DNA repair protein RadC [Burkholderia thailandensis E264] Length = 262 Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 166 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 225 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ + DH ++G + SF I Sbjct: 226 HLTRVLRDALALVDVQLIDHFVVGANDTFSFAQAGWI 262 >gi|86160242|ref|YP_467027.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-C] gi|85776753|gb|ABC83590.1| DNA replication and repair protein RadC [Anaeromyxobacter dehalogenans 2CP-C] Length = 235 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 48/95 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD L+ + G++ PV R+ ++ + A ++ VHNHPSG+P PS D+ Sbjct: 137 VLLDVRGRLLRAVQVAEGSLSQCPVSPRDALRPAVREGAHGVVFVHNHPSGDPTPSPDDV 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 ++T + + + ++ DH+I+ + SF Sbjct: 197 DLTARLRAAADLVGVLARDHVIVAAGGYYSFVEAG 231 >gi|167893197|ref|ZP_02480599.1| DNA repair protein RadC [Burkholderia pseudomallei 7894] Length = 172 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 76 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 135 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G SF I Sbjct: 136 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 172 >gi|237811181|ref|YP_002895632.1| DNA repair protein RadC [Burkholderia pseudomallei MSHR346] gi|254181484|ref|ZP_04888081.1| DNA repair protein RadC [Burkholderia pseudomallei 1655] gi|184212022|gb|EDU09065.1| DNA repair protein RadC [Burkholderia pseudomallei 1655] gi|237504391|gb|ACQ96709.1| DNA repair protein RadC [Burkholderia pseudomallei MSHR346] Length = 280 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 184 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 243 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G SF I Sbjct: 244 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 280 >gi|228969931|ref|ZP_04130654.1| DNA repair protein RadC [Bacillus thuringiensis serovar sotto str. T04001] gi|228789792|gb|EEM37651.1| DNA repair protein RadC [Bacillus thuringiensis serovar sotto str. T04001] Length = 154 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N ++A G+++ V+ R++ + + ++ SI++ H HPSG PSDAD Sbjct: 56 MCLNTQNEVVAVHRCHVGSLNSSVVHPRDVFKSAILNNSFSIVVAHQHPSGMVLPSDADK 115 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97 ++++ + + I V D +I+ F S + + Sbjct: 116 DVSKRLYDAGKLIGIEVLDSLIVNDAGRFYSLREKGYL 153 >gi|126441393|ref|YP_001058030.1| DNA repair protein RadC [Burkholderia pseudomallei 668] gi|171855114|sp|A3N6Q9|Y979_BURP6 RecName: Full=UPF0758 protein BURPS668_0979 gi|126220886|gb|ABN84392.1| DNA repair protein RadC [Burkholderia pseudomallei 668] Length = 278 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 182 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 241 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G SF I Sbjct: 242 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 278 >gi|262065984|ref|ZP_06025596.1| DNA repair protein RadC [Fusobacterium periodonticum ATCC 33693] gi|291380341|gb|EFE87859.1| DNA repair protein RadC [Fusobacterium periodonticum ATCC 33693] Length = 237 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N ++A E S GT+D +Y REI +R + +A SII+ HNHPSGN +PS DI Sbjct: 141 IYLSSSNEVLAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNISPSKCDI 200 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I L ++ +HIII +D++ SF +I Sbjct: 201 DITNEIAKGLKNFGALLIEHIIITRDSYFSFLEEGLI 237 >gi|159901512|ref|YP_001547758.1| DNA repair protein RadC [Herpetosiphon aurantiacus ATCC 23779] gi|159894551|gb|ABX07630.1| DNA repair protein RadC [Herpetosiphon aurantiacus ATCC 23779] Length = 204 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 46/94 (48%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L +I GT++ + ++ + L +A S+IL HNHPSG S DI + Sbjct: 107 LSTQAHIIGMHTVVVGTLNTAYCRMADLFREPLRRNAASVILAHNHPSGMVWASPEDILL 166 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ I L I + DH+IIGK + S + R+ Sbjct: 167 TKQAIQAGQLLEIELLDHLIIGKGGYTSMRERRL 200 >gi|319779280|ref|YP_004130193.1| DNA repair protein RadC [Taylorella equigenitalis MCE9] gi|317109304|gb|ADU92050.1| DNA repair protein RadC [Taylorella equigenitalis MCE9] Length = 227 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ L E+ +GTIDH P+Y REIV+ L A I++ HNHPSG PS ADI Sbjct: 129 LYLNYSFKLTHSEILIKGTIDHAPIYPREIVKSALRHHAAYIVMAHNHPSGRSEPSKADI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L +N+ + DHI+ + S L +I Sbjct: 189 EITKKLKSALELVNVKLIDHIVCTRVEATSMAELGLI 225 >gi|282895499|ref|ZP_06303636.1| DNA repair protein RadC [Raphidiopsis brookii D9] gi|281199532|gb|EFA74395.1| DNA repair protein RadC [Raphidiopsis brookii D9] Length = 115 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 52/93 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N + ++ + GT R+I + + AT +I+ HNHPSGN +PS AD+ Sbjct: 11 LLLDVKNRFLGTKIITIGTATETLASPRDIFREVIRHGATRMIIAHNHPSGNLDPSQADL 70 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 ++T+ +++ LNI + DH+I+G S + Sbjct: 71 DLTRQLLSGAQLLNIPILDHLILGNGNHQSLRE 103 >gi|167909900|ref|ZP_02496991.1| DNA repair protein RadC [Burkholderia pseudomallei 112] Length = 218 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 122 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 181 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G SF I Sbjct: 182 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 218 >gi|167823105|ref|ZP_02454576.1| DNA repair protein RadC [Burkholderia pseudomallei 9] Length = 217 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 121 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 180 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G SF I Sbjct: 181 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 217 >gi|167901650|ref|ZP_02488855.1| DNA repair protein RadC [Burkholderia pseudomallei NCTC 13177] Length = 216 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 120 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 179 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G SF I Sbjct: 180 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 216 >gi|167814637|ref|ZP_02446317.1| DNA repair protein RadC [Burkholderia pseudomallei 91] Length = 215 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 119 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 178 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G SF I Sbjct: 179 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 215 >gi|167844668|ref|ZP_02470176.1| DNA repair protein RadC [Burkholderia pseudomallei B7210] Length = 208 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 112 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 171 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G SF I Sbjct: 172 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 208 >gi|154149630|ref|YP_001403248.1| DNA repair protein RadC [Candidatus Methanoregula boonei 6A8] gi|153998182|gb|ABS54605.1| DNA repair protein RadC [Methanoregula boonei 6A8] Length = 220 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 48/95 (50%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L +I V + G ++H V+ RE+ + A S++ VHNHPSG+ S DI + Sbjct: 126 LSGAGEVITSRVITIGILNHSLVHPREVFAGAITDRAASVVCVHNHPSGSLEASPQDIAI 185 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L I + DHII+ + F S K +I Sbjct: 186 TRQLQEAGALLGIQLLDHIIVTRTGFSSLKEKGLI 220 >gi|293373275|ref|ZP_06619634.1| DNA repair protein RadC [Bacteroides ovatus SD CMC 3f] gi|292631760|gb|EFF50379.1| DNA repair protein RadC [Bacteroides ovatus SD CMC 3f] Length = 202 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +F++ +I S G ++ + IR +++ + ATS IL HNHPSGN PS D Sbjct: 106 IFMNSSARVIKRIRISSGGLNTCLIDIRVLLKEAILCEATSFILSHNHPSGNTKPSIEDD 165 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ+ T LNI + DH+II D++ S+ I Sbjct: 166 KLTQSAATAAKTLNIRMLDHVIICNDSYYSYADEGRI 202 >gi|299768777|ref|YP_003730803.1| DNA repair protein RadC [Acinetobacter sp. DR1] gi|298698865|gb|ADI89430.1| DNA repair protein RadC [Acinetobacter sp. DR1] Length = 235 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 47/97 (48%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G++ H V + + ++ L+ A +++ HNHP G+ PS DI Sbjct: 131 LCLDPELRKLHFKKLFFGSMQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSAQPSAEDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I + DH II + SF +++ Sbjct: 191 ALTQQLENACKLVEIHLLDHFIISPEGSFSFAEQQLL 227 >gi|296125781|ref|YP_003633033.1| DNA repair protein RadC [Brachyspira murdochii DSM 12563] gi|296017597|gb|ADG70834.1| DNA repair protein RadC [Brachyspira murdochii DSM 12563] Length = 227 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + I+ E RGTID +Y R++V++ L L ++ +I+ HNHPSG PS DI Sbjct: 122 VCLDVNKKFISMEHIFRGTIDSATIYPRDLVEKSLSLGSSYVIVSHNHPSGIAKPSKEDI 181 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 N+T + ++I + DHIII +++ SF+ + Sbjct: 182 NITNVLYKAFKMVDIKMLDHIIIAANSYYSFREDGM 217 >gi|209526662|ref|ZP_03275186.1| DNA repair protein RadC [Arthrospira maxima CS-328] gi|209492898|gb|EDZ93229.1| DNA repair protein RadC [Arthrospira maxima CS-328] Length = 243 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L +D N L+ ++ + GT + R+I + L+ +AT +I+ HNHPSGN PS D+ Sbjct: 139 LLMDVKNRLLGTKLLTIGTATETLAHPRDIFREVLKHNATRLIIAHNHPSGNVEPSYQDL 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ ++ L++ + DH+I+G + S + Sbjct: 199 ELTRLLLEGGQLLSLPILDHLILGNGNYGSIRQK 232 >gi|167957117|ref|ZP_02544191.1| DNA repair protein RadC [candidate division TM7 single-cell isolate TM7c] gi|169836908|ref|ZP_02870096.1| DNA repair protein RadC [candidate division TM7 single-cell isolate TM7a] Length = 214 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 37/88 (42%), Positives = 49/88 (55%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD N LIA V + GT+ V+ RE+ + A SII+ HNHPSG+ S AD ++ Sbjct: 125 LDGANRLIAKRVVTIGTLTASLVHPREVFADAIADRAASIIVAHNHPSGSLEASQADKDV 184 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVS 90 T + L I ++DHIII K FVS Sbjct: 185 TSRLAEAGRLLGITLNDHIIITKTDFVS 212 >gi|328948862|ref|YP_004366199.1| DNA repair protein RadC [Treponema succinifaciens DSM 2489] gi|328449186|gb|AEB14902.1| DNA repair protein RadC [Treponema succinifaciens DSM 2489] Length = 223 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 50/94 (53%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 + +++ V S GTI+ ++ RE+ + A+ II HNHP G PS+ADI+ T Sbjct: 130 NGAKEILSTRVVSVGTINKALIHPREVFANAVSEYASGIICCHNHPCGQCYPSNADIDST 189 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + + L I+ DHIII K+ + SF ++ Sbjct: 190 KILQKAAKILGIVFMDHIIITKEDYFSFLEHGML 223 >gi|302037820|ref|YP_003798142.1| DNA repair protein RadC-like protein [Candidatus Nitrospira defluvii] gi|300605884|emb|CBK42217.1| DNA repair protein RadC homolog [Candidatus Nitrospira defluvii] Length = 220 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 51/94 (54%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 + N ++ V + G ID PV+ RE+ + A++II+ HNHP+G+ PS ADI +T Sbjct: 127 NGANEILNIRVVTIGLIDQTPVHPREVFAEAVSDRASAIIVAHNHPAGSLQPSTADIEIT 186 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 Q I L I + DHII + ++ SF + Sbjct: 187 QKIKNAGLTLGIELLDHIIFNRQSYYSFLEDGKL 220 >gi|42520476|ref|NP_966391.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of Drosophila melanogaster] gi|58697545|ref|ZP_00372786.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of Drosophila simulans] gi|58698969|ref|ZP_00373824.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|58699197|ref|ZP_00374008.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|225630364|ref|YP_002727155.1| DNA repair protein RadC, putative [Wolbachia sp. wRi] gi|225630758|ref|YP_002727549.1| DNA repair protein RadC, putative [Wolbachia sp. wRi] gi|42410215|gb|AAS14325.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of Drosophila melanogaster] gi|58534284|gb|EAL58472.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|58534509|gb|EAL58653.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|58535974|gb|EAL59696.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of Drosophila simulans] gi|225592345|gb|ACN95364.1| DNA repair protein RadC, putative [Wolbachia sp. wRi] gi|225592739|gb|ACN95758.1| DNA repair protein RadC, putative [Wolbachia sp. wRi] Length = 218 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+K LI +E G ++ PVYI+EI ++ L +ATSII+ HNHP G+ PS+ D Sbjct: 123 LYLNKRRQLIGEES-YIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSEEDQ 181 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ + +++ + DHIII + SF+ ++ Sbjct: 182 AVTKSLAAACSTVSVKLFDHIIITSGGYFSFRENGLL 218 >gi|27262222|gb|AAN87392.1| DNA repair protein RadC [Heliobacillus mobilis] Length = 216 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 49/81 (60%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +++ E S G++ V+ RE+ + + SA +++L+HNHPSG+P PS D + Sbjct: 135 LNTKNQVLSIEDISVGSLSSSIVHPRELFKALIRKSAAAVVLLHNHPSGDPTPSREDREI 194 Query: 63 TQNIITTLNPLNIIVHDHIII 83 T+ I+ L I V DH+I+ Sbjct: 195 TRRIVEAGRILGIEVLDHVIV 215 >gi|256847982|ref|ZP_05553426.1| DNA repair protein RadC [Lactobacillus coleohominis 101-4-CHN] gi|256715042|gb|EEU30019.1| DNA repair protein RadC [Lactobacillus coleohominis 101-4-CHN] Length = 112 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 49/93 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L D HN +IA + G +Y +I + L+ A +I+VHNHP+G PSD D+ Sbjct: 15 LCTDVHNEIIARQQLFIGGRSQCSLYPDQIFRYALKNCAAGVIIVHNHPTGYSEPSDNDL 74 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 M Q + N + I + D +IIG + + S++ Sbjct: 75 MMCQRLERAGNLIGIQLIDFLIIGHNKYYSWRE 107 >gi|160888055|ref|ZP_02069058.1| hypothetical protein BACUNI_00463 [Bacteroides uniformis ATCC 8492] gi|270295580|ref|ZP_06201781.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317478564|ref|ZP_07937721.1| DNA repair protein RadC [Bacteroides sp. 4_1_36] gi|156862554|gb|EDO55985.1| hypothetical protein BACUNI_00463 [Bacteroides uniformis ATCC 8492] gi|270274827|gb|EFA20688.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316905205|gb|EFV27002.1| DNA repair protein RadC [Bacteroides sp. 4_1_36] Length = 228 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L ++ +I SRG ID +R I++ L AT I L+HNHPSGNP+PS+ D Sbjct: 132 LLMNHAAKVIDKVRISRGGIDQTTADVRSILREALLQRATQIALIHNHPSGNPHPSNDDQ 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + +NI + DH+I+ + SF ++ Sbjct: 192 RLTELVRKAAQTMNIHLTDHVIVTDGSHYSFNDEGLL 228 >gi|167718469|ref|ZP_02401705.1| DNA repair protein RadC [Burkholderia pseudomallei DM98] Length = 203 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 107 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 166 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G SF I Sbjct: 167 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 203 >gi|167737518|ref|ZP_02410292.1| DNA repair protein RadC [Burkholderia pseudomallei 14] Length = 199 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 103 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 162 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L ++I + DH ++G SF I Sbjct: 163 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 199 >gi|19704244|ref|NP_603806.1| DNA repair protein radC [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|25009025|sp|Q8RF15|Y909_FUSNN RecName: Full=UPF0758 protein FN0909 gi|19714474|gb|AAL95105.1| DNA repair protein radC [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 232 Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N +I E S GT+D VY REI ++ + L+A SIIL HNHPS N PS +DI Sbjct: 136 IYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHNHPSDNITPSKSDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L ++ +HIII K+++ SF +I Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >gi|237744553|ref|ZP_04575034.1| DNA repair protein radC [Fusobacterium sp. 7_1] gi|229431782|gb|EEO41994.1| DNA repair protein radC [Fusobacterium sp. 7_1] Length = 232 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N +I E S GT+D VY REI +R + L+A SIIL HNHPS N PS +DI Sbjct: 136 IYLSSSNEVIEFEENSTGTLDRSSVYPREIYKRVINLNAKSIILAHNHPSDNITPSKSDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L ++ +HIII K+++ SF +I Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >gi|260494432|ref|ZP_05814562.1| DNA repair protein radC [Fusobacterium sp. 3_1_33] gi|260197594|gb|EEW95111.1| DNA repair protein radC [Fusobacterium sp. 3_1_33] Length = 232 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N +I E S GT+D VY REI +R + L+A SIIL HNHPS N PS +DI Sbjct: 136 IYLSSSNEVIEFEENSTGTLDRSSVYPREIYKRVINLNAKSIILAHNHPSDNITPSKSDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L ++ +HIII K+++ SF +I Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >gi|167917922|ref|ZP_02505013.1| DNA repair protein RadC [Burkholderia pseudomallei BCC215] Length = 214 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 118 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L ++I + DH ++G SF I Sbjct: 178 HLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 214 >gi|317504084|ref|ZP_07962086.1| DNA repair protein RadC [Prevotella salivae DSM 15606] gi|315664756|gb|EFV04421.1| DNA repair protein RadC [Prevotella salivae DSM 15606] Length = 234 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++H LI S G I V +R I++ L +AT ++L HNHPS + PS +D Sbjct: 138 MLLNQHYKLIKAMAISHGGITETAVDVRVILKEALLCNATVLVLAHNHPSNHIQPSKSDD 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I DH+I+ + S+ + Sbjct: 198 QLTQRVKKACEAVRIYFLDHVIVTDGTYYSYHDSGRL 234 >gi|291522255|emb|CBK80548.1| DNA replication and repair protein RadC [Coprococcus catus GD/7] Length = 234 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 53/91 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD +I++ + ++GT++ + REI + L+ A SI+LVHNHPSG+ PS D+ Sbjct: 138 MMLDTKQHMISECLLTKGTVNASLIAPREIFIQALKAGAVSIVLVHNHPSGDDTPSREDL 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91 T+ + + + I + DHIIIG F S Sbjct: 198 AATEKVRSAGELIGIRLIDHIIIGSGHFTSL 228 >gi|296328881|ref|ZP_06871392.1| DNA repair protein RadC [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154002|gb|EFG94809.1| DNA repair protein RadC [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 232 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N +I E S GT+D VY REI ++ + L+A SIIL HNHPS N PS +DI Sbjct: 136 IYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHNHPSDNITPSKSDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L ++ +HIII K+++ SF +I Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >gi|167580122|ref|ZP_02372996.1| DNA repair protein RadC [Burkholderia thailandensis TXDOH] Length = 212 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 116 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 175 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L +++ + DH ++G + SF I Sbjct: 176 RLTRVLRDALALVDVQLIDHFVVGANDTFSFAQAGWI 212 >gi|294012615|ref|YP_003546075.1| DNA repair protein RadC [Sphingobium japonicum UT26S] gi|292675945|dbj|BAI97463.1| DNA repair protein RadC [Sphingobium japonicum UT26S] Length = 275 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LF + IADE GT HV + + E+V+ + + ++ HNHPSG P PS AD+ Sbjct: 179 LFFNDACDAIADERIWPGTSTHVELPLGELVRHAIACGSPRLLFAHNHPSGAPQPSRADV 238 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ L I VHDHII+ + SF+ + Sbjct: 239 EFTRRLVRICKDLQIRVHDHIIVSRHGSFSFRDRGYM 275 >gi|160890249|ref|ZP_02071252.1| hypothetical protein BACUNI_02689 [Bacteroides uniformis ATCC 8492] gi|317480225|ref|ZP_07939332.1| DNA repair protein RadC [Bacteroides sp. 4_1_36] gi|156859981|gb|EDO53412.1| hypothetical protein BACUNI_02689 [Bacteroides uniformis ATCC 8492] gi|316903607|gb|EFV25454.1| DNA repair protein RadC [Bacteroides sp. 4_1_36] Length = 196 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 45/94 (47%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 ++ +I S G ID IR I++ ++ A VHNHPSGN PS+ D +T Sbjct: 103 NQAGRIIKKVRISVGGIDQTSADIRLIMRVLIDTGAVQFAAVHNHPSGNSRPSNEDKRLT 162 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + + NI + DH+II + SF +I Sbjct: 163 EQLKKAAGLFNIRMIDHVIITNGGYYSFGDEGLI 196 >gi|299143817|ref|ZP_07036897.1| DNA repair protein RadC [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518302|gb|EFI42041.1| DNA repair protein RadC [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 240 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 51/95 (53%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + + S+G I+ V+ RE+ + ++ A +IIL+HNHPSG+P PS D + Sbjct: 146 LNTKKEIENIKCISKGIINATLVHPREVFKTAIDERAHTIILLHNHPSGDPTPSREDFEL 205 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + T + I V DHIIIG + SF I Sbjct: 206 TDKLSGTGKVIGIEVIDHIIIGNKKYYSFLEHGKI 240 >gi|159028578|emb|CAO90580.1| radC [Microcystis aeruginosa PCC 7806] Length = 243 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 54/93 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N LIA +V + GT V+ REI + ++ SAT +I+ HNHP+G+ PS DI Sbjct: 139 ILLDVKNQLIALKVITIGTATETLVHPREIFREVVKQSATKLIIAHNHPTGSLVPSQDDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 +T+ ++ L I + DH+I+G F S + Sbjct: 199 LLTEQLLQGATYLAIPLLDHLILGNGNFQSLRQ 231 >gi|329911397|ref|ZP_08275501.1| DNA repair protein RadC [Oxalobacteraceae bacterium IMCC9480] gi|327545922|gb|EGF31022.1| DNA repair protein RadC [Oxalobacteraceae bacterium IMCC9480] Length = 181 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LF+D N LIA E RGT+ H VY REIV+ L +A +++L HNHPSG PS +D Sbjct: 85 LFVDVANRLIASEEMFRGTLTHASVYPREIVKAALLHNAAALLLAHNHPSGIAEPSSSDR 144 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + L +++ V DH+I+ + SF ++ Sbjct: 145 ALTQTLKSALAMIDVKVIDHLIVAGNQVYSFAEHGML 181 >gi|324323789|gb|ADY24833.1| putative DNA repair protein RadC [Bacillus thuringiensis serovar finitimus YBT-020] Length = 147 Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N ++A G+++ V+ R++ + + ++ SI++ H HPSG PSDAD Sbjct: 49 MCLNTQNEVVAVHRCHVGSLNSSVVHPRDVFKGAILNNSFSIVVAHQHPSGMILPSDADK 108 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97 ++++ + + I V D +I+ F S + + Sbjct: 109 DVSKRLYDAGKLIGIEVLDSLIVNDAGRFYSLREKGYL 146 >gi|153854527|ref|ZP_01995797.1| hypothetical protein DORLON_01792 [Dorea longicatena DSM 13814] gi|149752836|gb|EDM62767.1| hypothetical protein DORLON_01792 [Dorea longicatena DSM 13814] Length = 157 Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%) Query: 3 LDKHN--ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+ N +I + S GTI+ V RE+ + + +A++II +HNHPSGN PS D+ Sbjct: 49 LNMKNNGQVINMNLVSVGTINASLVIPREVFKSSILANASAIIGLHNHPSGNVKPSKEDM 108 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK--DAFVSFKGLRII 97 +T+ + L I + DHII+G +SF+ +++ Sbjct: 109 IVTRKLQKCGQLLGIELLDHIIVGGTNGKMLSFREEKML 147 >gi|327484356|gb|AEA78763.1| DNA repair protein RadC [Vibrio cholerae LMA3894-4] Length = 138 Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 48/75 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + LI + RGT+D VY RE+++ L ++A ++I HNHPSG+P PS AD Sbjct: 63 LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122 Query: 61 NMTQNIITTLNPLNI 75 +TQ + L+ ++I Sbjct: 123 RITQRLKDALSLVDI 137 >gi|306821365|ref|ZP_07454973.1| DNA repair protein RadC [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550583|gb|EFM38566.1| DNA repair protein RadC [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 229 Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD +I D+ S G + + RE+ + + A S+I++HNHPS NP PSD DI Sbjct: 132 ICLDTKKHIIFDKNLSVGVANATAITAREVFKEAVLRHAVSVIVMHNHPSKNPLPSDQDI 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97 +T+ ++ L+I + DHII G + + SF+ I Sbjct: 192 ALTRKLVDAGRCLDIDLTDHIIYGSVENYYSFRENNRI 229 >gi|187735725|ref|YP_001877837.1| DNA repair protein RadC [Akkermansia muciniphila ATCC BAA-835] gi|187425777|gb|ACD05056.1| DNA repair protein RadC [Akkermansia muciniphila ATCC BAA-835] Length = 246 Score = 105 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD LI S GT++ + R+I++ + +A IL HNHPSGNP PS D Sbjct: 131 LLLDTKCRLIKPVEISSGTLNESIAHPRDILRPTVIHNAYGFILAHNHPSGNPAPSRTDD 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK------DAFVSF 91 +T+ + L + DH+IIGK + S+ Sbjct: 191 LLTERVRECSKLLGVRFLDHVIIGKPTETTNKNYYSY 227 >gi|300779059|ref|ZP_07088917.1| DNA repair protein RadC [Chryseobacterium gleum ATCC 35910] gi|300504569|gb|EFK35709.1| DNA repair protein RadC [Chryseobacterium gleum ATCC 35910] Length = 147 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 37/97 (38%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +++++ N ++ + S I V IR I+Q L +A S I+ HNHPSGN PS DI Sbjct: 51 MYMNQANKVLGIQKISESGITSSLVDIRIIMQGALLCNAVSFIIAHNHPSGNLTPSREDI 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+TQ I LNI + DH II SF I+ Sbjct: 111 NITQKIKEAAQLLNINMLDHCIITSTDSFSFSNEGIL 147 >gi|190570723|ref|YP_001975081.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019846|ref|ZP_03335648.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190356995|emb|CAQ54384.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994594|gb|EEB55240.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 218 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+K LI +E G ++ PVYI+EI ++ L +AT +I+ HNHP G+ PS+ D Sbjct: 123 LYLNKRRQLIGEES-YIGEMEKAPVYIKEITRKALIKNATLVIMSHNHPGGSLEPSEEDQ 181 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ + +++ + DHIII + SF+ ++ Sbjct: 182 EVTKSLAAACSTVSVRLFDHIIITSGGYFSFRENGLL 218 >gi|317503618|ref|ZP_07961638.1| DNA repair protein RadC [Prevotella salivae DSM 15606] gi|315665279|gb|EFV04926.1| DNA repair protein RadC [Prevotella salivae DSM 15606] Length = 228 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ H LI S G + + +R I++ L +AT + L HNHPSG+ PS D Sbjct: 132 LFLNHHYKLIKSIKLSEGGLTETAIDVRVILKEALLCNATVVALAHNHPSGSITPSLPDD 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + I DHII+ + S++ + Sbjct: 192 SITKRVQKACEAVRIYFLDHIIVTDGRYYSYRDSGRL 228 >gi|219850975|ref|YP_002465407.1| DNA repair protein RadC [Methanosphaerula palustris E1-9c] gi|219545234|gb|ACL15684.1| DNA repair protein RadC [Methanosphaerula palustris E1-9c] Length = 225 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 49/95 (51%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 ++ ++ + G ++ ++ RE + A S+I VHNHPSG+ PS+ D + Sbjct: 131 MNGAGEMVKVRTITVGLLNQSQIHPREAFADAITDRAASVIFVHNHPSGSLLPSEQDRAV 190 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ ++ L I V DH+II K F+S K +I Sbjct: 191 TRQLVEAGKILGIAVLDHLIISKKGFLSMKEQGLI 225 >gi|307297496|ref|ZP_07577302.1| DNA repair protein RadC [Thermotogales bacterium mesG1.Ag.4.2] gi|306916756|gb|EFN47138.1| DNA repair protein RadC [Thermotogales bacterium mesG1.Ag.4.2] Length = 226 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 46/90 (51%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD S G +D ++ RE+ + + A +IILVHNHPSG+P+PS D + Sbjct: 125 LDSKLNYRGLNTVSVGLLDSSLLHPREVYKPAISRMAAAIILVHNHPSGDPSPSKEDEGV 184 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 T I L I + DH+IIG F SF Sbjct: 185 TSKIREAGETLGIKMLDHVIIGSGTFYSFA 214 >gi|282883116|ref|ZP_06291715.1| DNA repair protein RadC-like protein [Peptoniphilus lacrimalis 315-B] gi|281296928|gb|EFA89425.1| DNA repair protein RadC-like protein [Peptoniphilus lacrimalis 315-B] Length = 236 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ + S G I+ V+ RE+ ++ + A SIIL+HNHP+G+P+PS D Sbjct: 139 IILNTKKEIKYIREISHGIINMTVVHPREVFRQAISDGAHSIILLHNHPTGDPSPSQEDR 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T+ ++ + I + DHIIIG + F SF I+ Sbjct: 199 NLTRRLVEVSKIVGIDICDHIIIGDNTFFSFLKEGIL 235 >gi|150003115|ref|YP_001297859.1| putative DNA repair protein [Bacteroides vulgatus ATCC 8482] gi|149931539|gb|ABR38237.1| putative DNA repair protein [Bacteroides vulgatus ATCC 8482] Length = 229 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ + +I S G + V +R +++ L A ++ L HNHPSG+ PS D Sbjct: 133 LLLNQASKVIDCIKISSGGLVSTAVDVRCVLREALLKRAVAMALCHNHPSGSMRPSTEDD 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ +NI + DH+I+ F S+ I Sbjct: 193 RLTEHLDKAAKVMNIRLIDHVILTDGKFYSYADEGKI 229 >gi|169823524|ref|YP_001691027.1| putative DNA repair protein [Finegoldia magna ATCC 29328] gi|167832144|dbj|BAG09059.1| putative DNA repair protein [Finegoldia magna ATCC 29328] Length = 166 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 7/101 (6%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N +I ++ S GT++ V+ RE+ ++ + A SII+ HNHPS + PS ADI Sbjct: 63 ILLDTKNKIIGIDLVSIGTLNSSLVHPRELFRKAILAGANSIIIAHNHPSNSTEPSSADI 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-------KDAFVSFKGL 94 M + + + L I + D +II K +S + Sbjct: 123 AMAKRLEKCGDILGIPLLDSLIIAFDSTPEKKGRLLSMRQN 163 >gi|256845195|ref|ZP_05550653.1| DNA repair protein radC [Fusobacterium sp. 3_1_36A2] gi|294785500|ref|ZP_06750788.1| DNA repair protein RadC [Fusobacterium sp. 3_1_27] gi|256718754|gb|EEU32309.1| DNA repair protein radC [Fusobacterium sp. 3_1_36A2] gi|294487214|gb|EFG34576.1| DNA repair protein RadC [Fusobacterium sp. 3_1_27] Length = 232 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N +I E S GT+D VY REI ++ + L+A SIIL HNHPS N PS +DI Sbjct: 136 IYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHNHPSDNITPSKSDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L ++ +HIII K+++ SF +I Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >gi|197302494|ref|ZP_03167549.1| hypothetical protein RUMLAC_01222 [Ruminococcus lactaris ATCC 29176] gi|197298392|gb|EDY32937.1| hypothetical protein RUMLAC_01222 [Ruminococcus lactaris ATCC 29176] Length = 168 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%) Query: 3 LDKHN--ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+ N +I + S GTI+ V RE+ + + +A++II +HNHPSGN PS D+ Sbjct: 59 LNMKNNGQVINMNLVSVGTINASLVIPREVFKSSILANASAIIGLHNHPSGNVKPSKEDM 118 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK--DAFVSFKGLRII 97 +T+ + L I + DHII+G +SF+ +++ Sbjct: 119 IVTRKLQKCGQLLGIELLDHIIVGGTNGKMLSFREEKML 157 >gi|166367176|ref|YP_001659449.1| DNA repair protein RadC [Microcystis aeruginosa NIES-843] gi|229470320|sp|B0JTF4|Y4435_MICAN RecName: Full=UPF0758 protein MAE_44350 gi|166089549|dbj|BAG04257.1| DNA repair protein [Microcystis aeruginosa NIES-843] Length = 243 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 54/93 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N LIA +V + GT V+ REI + ++ SAT +I+ HNHP+G+ PS DI Sbjct: 139 ILLDVKNQLIALKVITIGTATETLVHPREIFREVVKQSATKLIIAHNHPTGSLVPSQDDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 +T+ ++ L I + DH+I+G F S + Sbjct: 199 LLTEQLLQGATYLAIPLLDHLILGNGNFQSLRQ 231 >gi|212691747|ref|ZP_03299875.1| hypothetical protein BACDOR_01242 [Bacteroides dorei DSM 17855] gi|237708658|ref|ZP_04539139.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237724073|ref|ZP_04554554.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265755314|ref|ZP_06090084.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212665648|gb|EEB26220.1| hypothetical protein BACDOR_01242 [Bacteroides dorei DSM 17855] gi|229437533|gb|EEO47610.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229457358|gb|EEO63079.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263234456|gb|EEZ20046.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 229 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ + +I S G + V +R +++ L A ++ L HNHPSG+ PS D Sbjct: 133 LLLNQASKVIDRIKISSGGLASTAVDVRCVLREALLKRAVAMALCHNHPSGSMRPSTEDD 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ +NI + DH+I+ F S+ + Sbjct: 193 RLTEHLDKAAKVMNIRLIDHVILTDGKFYSYADEGRM 229 >gi|150020120|ref|YP_001305474.1| DNA repair protein RadC [Thermosipho melanesiensis BI429] gi|149792641|gb|ABR30089.1| DNA repair protein RadC [Thermosipho melanesiensis BI429] Length = 213 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ +I+ + G ID + RE+ + ++ SA I+LVHNHPSG+ PS D Sbjct: 118 IMLNSKLSVISSRDITIGLIDTSLAHPREVFREAIKNSAVYIVLVHNHPSGDVTPSKNDK 177 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T + + I + DH+IIG + F SFK R+I Sbjct: 178 DLTYKVKEAGEIIGIKLLDHVIIG-NGFYSFKHNRLI 213 >gi|167618186|ref|ZP_02386817.1| DNA repair protein RadC [Burkholderia thailandensis Bt4] Length = 209 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 113 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 172 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + L +++ + DH ++G + SF I Sbjct: 173 HLTRVLRDALALVDVQLIDHFVVGANDTFSFAQAGWI 209 >gi|254303275|ref|ZP_04970633.1| DNA repair protein RadC [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323467|gb|EDK88717.1| DNA repair protein RadC [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 232 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 56/97 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L N +I E S GT+D VY REI ++ + L+A SIIL HNHPS N PS DI Sbjct: 136 LYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKIINLNAKSIILAHNHPSDNITPSKCDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L ++ +HIII K+++ SF +I Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >gi|126657586|ref|ZP_01728741.1| DNA repair protein RadC [Cyanothece sp. CCY0110] gi|126621042|gb|EAZ91756.1| DNA repair protein RadC [Cyanothece sp. CCY0110] Length = 242 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 51/91 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD L+ +V + GT V EI + L+ A ++I+ HNHPSGN PS D+ Sbjct: 139 VFLDSKYRLLGTKVITIGTATETLVDPAEIFRETLKQGANALIVAHNHPSGNVEPSQQDL 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91 ++T+ ++ + + I + DH+I+G+ S Sbjct: 199 DLTEQLLQGMQLIRIPLIDHLILGEGNHCSL 229 >gi|172037408|ref|YP_001803909.1| DNA repair protein RadC [Cyanothece sp. ATCC 51142] gi|226713857|sp|B1WRJ4|Y2495_CYAA5 RecName: Full=UPF0758 protein cce_2495 gi|171698862|gb|ACB51843.1| DNA repair protein radC [Cyanothece sp. ATCC 51142] Length = 242 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 51/91 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD L+ +V + GT V EI + L+ A ++I+ HNHPSGN PS D+ Sbjct: 139 VFLDSKYRLLGTKVITIGTATETLVDPAEIFRETLKQGANALIVAHNHPSGNVEPSQQDL 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91 ++T+ ++ + + I + DH+I+G+ S Sbjct: 199 DLTEQLLKGMQLIRIPLIDHLILGEGNHCSL 229 >gi|225619798|ref|YP_002721055.1| putative DNA repair protein RadC [Brachyspira hyodysenteriae WA1] gi|225214617|gb|ACN83351.1| putative DNA repair protein RadC [Brachyspira hyodysenteriae WA1] Length = 233 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + I+ + RGTID +Y R++V++ L L A+ +I+ HNHPSG PS DI Sbjct: 128 ICLDVNKRFISMDHIFRGTIDSATIYPRDLVEKSLSLGASYVIISHNHPSGISKPSKEDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T+ + ++I + DHII+ ++F SF+ + Sbjct: 188 EITKVLYKAFLMVDIKILDHIIVAGNSFYSFREDGM 223 >gi|256027337|ref|ZP_05441171.1| DNA repair protein radC [Fusobacterium sp. D11] gi|289765306|ref|ZP_06524684.1| DNA repair protein radC [Fusobacterium sp. D11] gi|289716861|gb|EFD80873.1| DNA repair protein radC [Fusobacterium sp. D11] Length = 232 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 41/97 (42%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N +I E S GT+D VY REI +R + L+A SIIL HNHPS N PS +DI Sbjct: 136 IYLSSSNEVIEFEENSAGTLDRSSVYPREIYKRVISLNAKSIILAHNHPSDNITPSKSDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L ++ +HIII K+++ SF +I Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >gi|289449440|ref|YP_003475202.1| DNA repair protein RadC [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289183987|gb|ADC90412.1| DNA repair protein RadC [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 239 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 50/93 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL+ N +I + + G +D + R+I L ++ SIIL HNHPSGN PS AD+ Sbjct: 137 VFLNTANRVIKVQHLATGGLDKCMLTPRDIYHYALACNSASIILAHNHPSGNLEPSKADL 196 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 TQ N L + + DH+II +VS + Sbjct: 197 VATQKYCNLGNELCLPLVDHLIIAGHNYVSLRS 229 >gi|34762350|ref|ZP_00143353.1| DNA repair protein radC [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27888004|gb|EAA25068.1| DNA repair protein radC [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 232 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N +I E S GT+D VY REI ++ + L+A S+IL HNHPS N PS +DI Sbjct: 136 IYLSSSNEVIEFEENSIGTLDRSSVYPREIYKKIINLNAKSVILAHNHPSDNITPSKSDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L ++ +HIII K+++ SF +I Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >gi|167835745|ref|ZP_02462628.1| DNA repair protein RadC [Burkholderia thailandensis MSMB43] Length = 203 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 55/97 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 107 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 166 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L +++ + DH ++G SF I Sbjct: 167 RLTSVLRDALALVDVKLIDHFVVGASDTFSFAQAGWI 203 >gi|254882396|ref|ZP_05255106.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319640551|ref|ZP_07995271.1| DNA repair protein [Bacteroides sp. 3_1_40A] gi|254835189|gb|EET15498.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317387828|gb|EFV68687.1| DNA repair protein [Bacteroides sp. 3_1_40A] Length = 229 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ + +I S G + V +R I++ L A ++ L HNHPSG+ PS D Sbjct: 133 LLLNQASKVIDRIKISSGGLVSTAVDVRCILREALLKRAVAMALCHNHPSGSMRPSTEDD 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ +NI + DH+I+ F S+ I Sbjct: 193 RLTEHLDKAAKVMNIRLIDHVILTDGKFYSYADEGKI 229 >gi|296450811|ref|ZP_06892562.1| DNA repair protein RadC [Clostridium difficile NAP08] gi|296260372|gb|EFH07216.1| DNA repair protein RadC [Clostridium difficile NAP08] Length = 213 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L N+ I + S GT++ V+ RE+++ +A SI+L HNHPSG+ PS DI Sbjct: 51 VHLRSDNVPINMTIISMGTLNQSLVHPREVLKAAFLSNAASILLFHNHPSGSLKPSKEDI 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKD-AFVSFKGLRII 97 +T + I V DH+I+G D ++ SF+ +I+ Sbjct: 111 ALTGRMQQLCMLAGIPVIDHVILGNDQSYFSFREKQIL 148 >gi|184154975|ref|YP_001843315.1| hypothetical protein LAF_0499 [Lactobacillus fermentum IFO 3956] gi|227514513|ref|ZP_03944562.1| DNA repair protein RadC [Lactobacillus fermentum ATCC 14931] gi|260663370|ref|ZP_05864261.1| DNA repair protein RadC [Lactobacillus fermentum 28-3-CHN] gi|183226319|dbj|BAG26835.1| hypothetical protein [Lactobacillus fermentum IFO 3956] gi|227087070|gb|EEI22382.1| DNA repair protein RadC [Lactobacillus fermentum ATCC 14931] gi|260552222|gb|EEX25274.1| DNA repair protein RadC [Lactobacillus fermentum 28-3-CHN] Length = 208 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 48/95 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + D HN +IA + G Y ++ + ++ A +IL HNHPSG+P PS AD+ Sbjct: 106 MCTDVHNKIIATKRLFIGGTSECSTYPNQVFRFAIKTGAHGVILAHNHPSGSPAPSTADM 165 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 + + + I + D +++G+ + S++ R Sbjct: 166 IFIKRMEEAGKLIGIALIDALVVGRRDYYSWREAR 200 >gi|299142824|ref|ZP_07035952.1| DNA repair protein RadC [Prevotella oris C735] gi|298575692|gb|EFI47570.1| DNA repair protein RadC [Prevotella oris C735] Length = 228 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ H LI S G + + +R I++ L +AT + L HNHPSG+ PS D Sbjct: 132 LFLNHHYKLIKSIKLSEGGLTETAIDVRVILKEALLCNATVVALAHNHPSGSITPSLPDD 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ + + + I DHII+ + S++ + Sbjct: 192 SITKRVQKACDAVRIYFLDHIIVTDGRYYSYRDSGRL 228 >gi|291522955|emb|CBK81248.1| DNA repair proteins [Coprococcus catus GD/7] Length = 860 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Query: 10 IADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITT 69 I + S G+++ + REI + + +A S++L+HNHPSGN PS +DI T + Sbjct: 58 INMNIVSVGSLNEALINPREIFKSAILSNAHSMMLIHNHPSGNLTPSTSDIQTTARMQEL 117 Query: 70 LNPLNIIVHDHIIIGKDA-FVSFKGLR 95 + I + DHII G++ + SF+ Sbjct: 118 GELMGISLVDHIITGRNGNYYSFRDKG 144 >gi|166032960|ref|ZP_02235789.1| hypothetical protein DORFOR_02681 [Dorea formicigenerans ATCC 27755] gi|166027317|gb|EDR46074.1| hypothetical protein DORFOR_02681 [Dorea formicigenerans ATCC 27755] Length = 860 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Query: 10 IADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITT 69 I + S G+++ + REI + + +A S++L+HNHPSGN PS +DI T + Sbjct: 58 INMNIVSVGSLNEALINPREIFKSAILSNAHSMMLIHNHPSGNLTPSTSDIQTTARMQEL 117 Query: 70 LNPLNIIVHDHIIIGKDA-FVSFKGLR 95 + I + DHII G++ + SF+ Sbjct: 118 GELMGISLVDHIITGRNGNYYSFRDKG 144 >gi|153811729|ref|ZP_01964397.1| hypothetical protein RUMOBE_02122 [Ruminococcus obeum ATCC 29174] gi|149832132|gb|EDM87217.1| hypothetical protein RUMOBE_02122 [Ruminococcus obeum ATCC 29174] Length = 447 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Query: 10 IADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITT 69 I + S G+++ + REI + + +A S++L+HNHPSGN PS +DI T + Sbjct: 58 INMNIVSVGSLNEALINPREIFKSAILSNAHSMMLIHNHPSGNLTPSTSDIQTTARMQEL 117 Query: 70 LNPLNIIVHDHIIIGKDA-FVSFKGLR 95 + I + DHII G++ + SF+ Sbjct: 118 GELMGISLVDHIITGRNGNYYSFRDKG 144 >gi|294775858|ref|ZP_06741357.1| DNA repair protein RadC [Bacteroides vulgatus PC510] gi|294450227|gb|EFG18728.1| DNA repair protein RadC [Bacteroides vulgatus PC510] Length = 229 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ + +I S G + V +R +++ L A ++ L HNHPSG+ PS D Sbjct: 133 LLLNQASKVIDRIKISSGGLVSTAVDVRCVLREALLKRAVAMALCHNHPSGSMRPSTEDD 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ +NI + DH+I+ F S+ I Sbjct: 193 RLTEHLDKAAKVMNIRLIDHVILTDGKFYSYADEGKI 229 >gi|237741852|ref|ZP_04572333.1| DNA repair protein radC [Fusobacterium sp. 4_1_13] gi|229429500|gb|EEO39712.1| DNA repair protein radC [Fusobacterium sp. 4_1_13] Length = 232 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L N +I E S GT+D VY REI ++ + L+A SIIL HNHPS N PS +DI Sbjct: 136 IYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKIINLNAKSIILAHNHPSDNITPSKSDI 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L ++ +HIII K+++ SF +I Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >gi|260775892|ref|ZP_05884788.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450] gi|260608308|gb|EEX34477.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450] Length = 224 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 53/96 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD + G+++H V+ RE+++ L L+A ++I HNHPSG+P+PS AD Sbjct: 128 LWLDNGLRALGTVDLFAGSLNHAAVHTREVLRSGLRLNAAAVIFYHNHPSGDPSPSQADR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T ++ L + I V DH+++ VSF Sbjct: 188 QLTNHLKDVLGQIEIRVLDHMVVSLSGVVSFAERGW 223 >gi|299142146|ref|ZP_07035279.1| DNA repair protein RadC [Prevotella oris C735] gi|298576235|gb|EFI48108.1| DNA repair protein RadC [Prevotella oris C735] Length = 230 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 46/97 (47%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++H LI S G I V +R I++ L +AT + L HNHPS + PS D Sbjct: 134 MLLNQHYKLIKALRISHGGISETAVDVRIILKEALLCNATVLALAHNHPSNHAQPSGPDD 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L I DH+II + S+ + Sbjct: 194 QLTQRVKKACEALRIYFLDHVIITDGTYYSYHDSGRL 230 >gi|281425091|ref|ZP_06256004.1| DNA repair protein RadC [Prevotella oris F0302] gi|281400935|gb|EFB31766.1| DNA repair protein RadC [Prevotella oris F0302] Length = 234 Score = 104 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 46/97 (47%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++H LI S G I V +R I++ L +AT + L HNHPS + PS D Sbjct: 138 MLLNQHYKLIKALRISHGGISETAVDVRIILKEALLCNATVLALAHNHPSNHAQPSGPDD 197 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L I DH+II + S+ + Sbjct: 198 QLTQRVKKACEALRIYFLDHVIITDGTYYSYHDSGRL 234 >gi|332175969|gb|AEE25222.1| DNA repair protein RadC [Glaciecola agarilytica 4H-3-7+YE-5] Length = 149 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ HN ++ E GT+ H VY REI ++ L+ A S+IL HNHPSG+ S +D Sbjct: 53 IYLNVHNEMLNYEEVFLGTVSHASVYPREIAKKALDCGAESVILAHNHPSGSLQVSASDE 112 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+NI + L L+I V DHII+ SF L ++ Sbjct: 113 CVTENIQSALRTLDIGVQDHIIVSHSGTTSFVDLNLL 149 >gi|309390282|gb|ADO78162.1| DNA repair protein RadC [Halanaerobium praevalens DSM 2228] Length = 149 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 1/96 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + S GT+ V RE+ +R + +A++I++ HNHPS P PS DI + Sbjct: 54 LDSKAQITGVFEVSIGTLSSSLVSPREVFKRAILQNASAILVGHNHPSFVPEPSSDDIKI 113 Query: 63 TQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 T+ ++ + I V DHII+G KD +VS + I Sbjct: 114 TKILVKAGKIIGIKVIDHIIVGSKDNYVSMQERGFI 149 >gi|212213199|ref|YP_002304135.1| DNA repair protein [Coxiella burnetii CbuG_Q212] gi|212011609|gb|ACJ18990.1| DNA repair protein [Coxiella burnetii CbuG_Q212] Length = 158 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 27/79 (34%), Positives = 46/79 (58%) Query: 19 TIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVH 78 + + V+ REI++R L ++ ++I+ HNHPSG +PS AD T ++ L +++ + Sbjct: 80 SFNQASVHPREIIKRALYHNSAALIVAHNHPSGVLDPSQADRAATTHLKEALALIDVRLL 139 Query: 79 DHIIIGKDAFVSFKGLRII 97 DHIIIG SF ++ Sbjct: 140 DHIIIGDRNSFSFAESGLL 158 >gi|313886466|ref|ZP_07820182.1| DNA repair protein RadC [Porphyromonas asaccharolytica PR426713P-I] gi|312924012|gb|EFR34805.1| DNA repair protein RadC [Porphyromonas asaccharolytica PR426713P-I] Length = 267 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 11/108 (10%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD +I DE+ S G + H +R I+ + A++IIL HNHP+G+ PS DI Sbjct: 157 LYLDASGRVIKDELVSSGGVSHAVADLRLILAPAITHYASAIILAHNHPTGHLQPSAEDI 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-----------KDAFVSFKGLRII 97 ++T+ + + NI ++DH+I+G + F+SF ++ Sbjct: 217 DLTKRVKQIASVCNIRLNDHLILGRYHASVTSDGERSHFLSFADNGLL 264 >gi|228470139|ref|ZP_04055048.1| DNA repair protein RadC [Porphyromonas uenonis 60-3] gi|228308277|gb|EEK17132.1| DNA repair protein RadC [Porphyromonas uenonis 60-3] Length = 267 Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 11/108 (10%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD +I DE+ S G + H +R I+ + A++IIL HNHP+G+ PS D+ Sbjct: 157 LYLDASGRVIKDELVSSGGVSHAVADLRLILAPAITHYASAIILAHNHPTGHLQPSAEDM 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-----------KDAFVSFKGLRII 97 ++T+ + + NI ++DH+I+G + ++SF ++ Sbjct: 217 DLTKRVKQVASVCNIRLNDHLILGRYHASVTSDGERSHYLSFADNGLL 264 >gi|94986594|ref|YP_594527.1| DNA repair proteins [Lawsonia intracellularis PHE/MN1-00] gi|94730843|emb|CAJ54205.1| DNA repair proteins [Lawsonia intracellularis PHE/MN1-00] Length = 226 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 54/94 (57%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D N LI+ E S+GTI P+Y R+ ++ L+ A+ ILVHNHP G+ N S DI +T Sbjct: 133 DTQNRLISWERLSKGTIGSSPLYPRDTIEIVLKRKASGFILVHNHPGGSSNASSFDIEIT 192 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +++ +N+ + DHII+ + S + ++ Sbjct: 193 RHLEHIAQSINLRLIDHIIVTEKNCYSIRNDGLL 226 >gi|332177387|gb|AEE13077.1| DNA repair protein RadC [Porphyromonas asaccharolytica DSM 20707] Length = 267 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 11/108 (10%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD +I DE+ S G + H +R I+ + A++IIL HNHP+G+ PS DI Sbjct: 157 LYLDASGRVIKDELVSSGGVSHAVADLRLILAPAITHYASAIILAHNHPTGHLQPSAEDI 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-----------KDAFVSFKGLRII 97 ++T+ + + NI ++DH+I+G + F+SF ++ Sbjct: 217 DLTKRVKQIASVCNIRLNDHLILGRYHASVTSDGERSHFLSFADNGLL 264 >gi|325972177|ref|YP_004248368.1| DNA repair protein RadC [Spirochaeta sp. Buddy] gi|324027415|gb|ADY14174.1| DNA repair protein RadC [Spirochaeta sp. Buddy] Length = 156 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 49/92 (53%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + ++ ++G ++ V+ RE+ + + +AT+I++ HNHPSGN PS D ++ Sbjct: 62 LNGAHQVVDVHAITKGLVNRTLVHPREVFRPVILDNATAIVIAHNHPSGNLEPSMEDKDI 121 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T + + L I V DH+I + + S Sbjct: 122 TMRLRQAGDILGIKVLDHLIFSPNGYHSMLEN 153 >gi|146301324|ref|YP_001195915.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101] gi|146155742|gb|ABQ06596.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101] Length = 156 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L + + ++ S G I V IR + L+ +A ++IL+HNHPSGN PSDAD Sbjct: 60 MLLSQSHKVLGIYEMSSGGIAGTVVDIRLLFTAALKAAAVNVILIHNHPSGNTAPSDADR 119 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L++ + DH+II +++ SF + Sbjct: 120 QITSKAVKAGQFLDVKILDHLIISSESYYSFADDGAL 156 >gi|288929818|ref|ZP_06423661.1| DNA repair protein RadC [Prevotella sp. oral taxon 317 str. F0108] gi|288328919|gb|EFC67507.1| DNA repair protein RadC [Prevotella sp. oral taxon 317 str. F0108] Length = 226 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 47/97 (48%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L ++++ LI S G I V +R I++ L + T + L HNHPS N +PS AD Sbjct: 129 LLMNQNYKLIKAFRISHGGISETAVDVRVIMREALLNNTTILALCHNHPSNNTSPSTADD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I DHII+ + S+ + Sbjct: 189 RLTQTVKKACETMRIHFLDHIIVTDGRYYSYHEEGRL 225 >gi|320537630|ref|ZP_08037565.1| putative DNA repair protein RadC [Treponema phagedenis F0421] gi|320145509|gb|EFW37190.1| putative DNA repair protein RadC [Treponema phagedenis F0421] Length = 228 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + +IA V S G ++ V+ RE+ L A SII+ HNHPSG+ PS+ DI + Sbjct: 121 LNGAHEIIAIRVVSVGILNRTIVHPREVFADPLSDRAASIIIAHNHPSGSLQPSEEDIAI 180 Query: 63 TQNIITTLNPLNIIVHDHII-IGKDAFVSFKGLRI 96 T+ + + + L I V DHII + + SF ++ Sbjct: 181 TERLYESGSLLGIQVLDHIILVPNGDYYSFVENKM 215 >gi|304316582|ref|YP_003851727.1| DNA repair protein RadC [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778084|gb|ADL68643.1| DNA repair protein RadC [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 234 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 40/96 (41%), Positives = 58/96 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +IA + S G+++ V+ RE+ + +E SA+SII+VHNHPSG+P PS DI Sbjct: 134 VMLNVKNKVIAVDTVSIGSLNTSIVHPREVFKAAIERSASSIIMVHNHPSGDPTPSREDI 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++ I + N L I V DHIIIG +S K Sbjct: 194 EVSDRIFKSGNLLGIKVLDHIIIGDGIGISLKEKGY 229 >gi|257454075|ref|ZP_05619349.1| DNA repair protein RadC [Enhydrobacter aerosaccus SK60] gi|257448553|gb|EEV23522.1| DNA repair protein RadC [Enhydrobacter aerosaccus SK60] Length = 225 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 53/95 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL LI EV G I V +RE+++ L+ A+ +I+ HNHPS + S AD+ Sbjct: 128 LFLTNQLTLIQYEVLFTGGISSCSVCVREVLRCALKYGASQLIIAHNHPSTSATASQADL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+++ +++ + DHII+G+D +S + Sbjct: 188 EITRSLAKACQLVDMTLIDHIIVGQDGTLSLQETG 222 >gi|329767471|ref|ZP_08258995.1| hypothetical protein HMPREF0428_00692 [Gemella haemolysans M341] gi|328835919|gb|EGF85635.1| hypothetical protein HMPREF0428_00692 [Gemella haemolysans M341] Length = 257 Score = 103 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 50/89 (56%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D +I +G++ V+ RE+ + ++ SA+SI+ VHNHPSG+ PS DI T Sbjct: 133 DTKGKIIEKREVFKGSLSMSVVHPREVFKLAIKNSASSIVCVHNHPSGDATPSIEDIKTT 192 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 N++ + I + DHI++ K +VS + Sbjct: 193 INLMEVGEVVGIEMLDHIVVAKKGYVSIR 221 >gi|226952864|ref|ZP_03823328.1| DNA repair protein [Acinetobacter sp. ATCC 27244] gi|226836375|gb|EEH68758.1| DNA repair protein [Acinetobacter sp. ATCC 27244] Length = 244 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 47/97 (48%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G+ V + + ++ L+ A I++ HNHP G +PS D+ Sbjct: 135 LCLDAELRKLHFKKLFFGSHHSCSVSLNQTLRYVLQQQACQIVVAHNHPYGIAHPSTEDL 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L I + DH II +++ SF +++ Sbjct: 195 YLTQQLKQACKLLEIHLIDHFIISPESYFSFSEQQLL 231 >gi|294649267|ref|ZP_06726702.1| DNA repair protein RadC [Acinetobacter haemolyticus ATCC 19194] gi|292824820|gb|EFF83588.1| DNA repair protein RadC [Acinetobacter haemolyticus ATCC 19194] Length = 244 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 47/97 (48%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + + G+ V + + ++ L+ A I++ HNHP G +PS D+ Sbjct: 135 LCLDAELRKLHFKKLFFGSHHSCSVSLNQTLRYVLQQQACQIVVAHNHPYGIAHPSTEDL 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + L I + DH II +++ SF +++ Sbjct: 195 YLTQQLKQACKLLEIHLIDHFIISPESYFSFSEQQLL 231 >gi|241889686|ref|ZP_04776984.1| DNA repair protein RadC homolog [Gemella haemolysans ATCC 10379] gi|241863308|gb|EER67692.1| DNA repair protein RadC homolog [Gemella haemolysans ATCC 10379] Length = 257 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 50/89 (56%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D +I +G++ V+ RE+ + ++ SA+SI+ VHNHPSG+ PS DI T Sbjct: 133 DTKGKIIEKREVFKGSLSMSVVHPREVFKLAIKNSASSIVCVHNHPSGDATPSIEDIKTT 192 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 N++ + I + DHI++ K +VS + Sbjct: 193 INLMEVGEIVGIEMLDHIVVAKKGYVSIR 221 >gi|254463516|ref|ZP_05076932.1| DNA repair protein RadC [Rhodobacterales bacterium HTCC2083] gi|206680105|gb|EDZ44592.1| DNA repair protein RadC [Rhodobacteraceae bacterium HTCC2083] Length = 253 Score = 103 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 51/97 (52%), Positives = 71/97 (73%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ N+LIADE GT+DHVPVY RE+++R LEL++ +IILVHNHPSG+P+PS +DI Sbjct: 157 LFLNRRNMLIADETLGVGTVDHVPVYPREVLKRALELNSCAIILVHNHPSGDPSPSSSDI 216 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I + L+I +HDH+IIG SF ++ Sbjct: 217 EMTKLIKQAADSLSITLHDHLIIGATGETSFVSEGLL 253 >gi|312794225|ref|YP_004027148.1| DNA repair protein radc [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181365|gb|ADQ41535.1| DNA repair protein RadC [Caldicellulosiruptor kristjanssonii 177R1B] Length = 159 Score = 103 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 48/94 (51%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D +A +RGT+ + +RE+ +R + + S I+ HNHP G+ PS D+ T Sbjct: 64 DPQLNPVAVFEVARGTLTEAQISMRELFKRLIISNCNSFIVAHNHPGGSERPSLDDVRTT 123 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 I T L I +DHII+ ++ + SF ++ Sbjct: 124 DRIRETAKLLGITFNDHIIVTEEGYYSFAENNML 157 >gi|300173737|ref|YP_003772903.1| DNA repair protein [Leuconostoc gasicomitatum LMG 18811] gi|299888116|emb|CBL92084.1| DNA repair protein [Leuconostoc gasicomitatum LMG 18811] Length = 203 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 48/93 (51%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD +I E G++ HV REI QR L +A ++VHNHPSGN PSDAD+ Sbjct: 104 LLDAQLSVIGWETIFVGSLTHVQASPREIFQRALHANALGFMIVHNHPSGNLKPSDADVQ 163 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +Q + + + + D I+ +D++ S Sbjct: 164 FSQRLKLLGEQMTVPMLDSFIVTRDSYWSMSEN 196 >gi|153006772|ref|YP_001381097.1| DNA repair protein RadC [Anaeromyxobacter sp. Fw109-5] gi|152030345|gb|ABS28113.1| DNA repair protein RadC [Anaeromyxobacter sp. Fw109-5] Length = 222 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 1/96 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS-GNPNPSDAD 59 + LD LI + G++ PV R+ ++ + A ++ VHNHPS G+P+PS D Sbjct: 123 VLLDVRGRLIKTVKIAEGSLTQCPVSPRDALREPVRSGAHGVVFVHNHPSGGDPSPSADD 182 Query: 60 INMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 ++T+ + + ++ DH+I+ + SF Sbjct: 183 ADLTERLRAAAELVGVLARDHVIVAAGGYYSFVEAG 218 >gi|116617575|ref|YP_817946.1| DNA repair protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096422|gb|ABJ61573.1| DNA repair protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 202 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 52/96 (54%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD +I EV GT+ V REI QR L+ +A ++ HNHPSGN PS+ADI Sbjct: 103 LLDTQLNVIGWEVVFVGTLSQVQASPREIFQRVLKANAFGFMIAHNHPSGNIMPSNADIT 162 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +Q + T + +++ + D I+ ++ + S + + Sbjct: 163 FSQRLATIGHQMDLRLFDSFIVTQNEYWSMSENQQL 198 >gi|307154341|ref|YP_003889725.1| DNA repair protein RadC [Cyanothece sp. PCC 7822] gi|306984569|gb|ADN16450.1| DNA repair protein RadC [Cyanothece sp. PCC 7822] Length = 243 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 53/93 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ + +A +V + GT V+ REI + ++ AT +I+ HNHPSGN PS DI Sbjct: 139 VLLNVKSQFLATKVITIGTATETLVHPREIFREVIKQGATKLIIGHNHPSGNVEPSQEDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 ++T+ ++ LNI + DH+I+G S + Sbjct: 199 DLTEQLLQGATFLNIPILDHLILGNGNHQSLRQ 231 >gi|187478895|ref|YP_786919.1| DNA repair protein RadC [Bordetella avium 197N] gi|123514372|sp|Q2KXW4|Y2405_BORA1 RecName: Full=UPF0758 protein BAV2405 gi|115423481|emb|CAJ50015.1| DNA repair protein [Bordetella avium 197N] Length = 225 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 36/84 (42%), Positives = 49/84 (58%) Query: 14 VQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPL 73 RGT+ V+ RE+V+ L L A +IIL HNHPSGNP PS AD TQ + L + Sbjct: 142 ELERGTLGRASVFPREVVREALRLHAGAIILAHNHPSGNPQPSAADCAFTQQLSQALALV 201 Query: 74 NIIVHDHIIIGKDAFVSFKGLRII 97 +I + DHII+ +D +S +I Sbjct: 202 DIRLVDHIIVARDQALSMAERGLI 225 >gi|257792997|ref|YP_003186396.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479689|gb|ACV60007.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 147 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L +I+ A S G +D V+ RE+ + + +A S+I+ HNHPSG+P PS D+ + Sbjct: 52 LSAKHIVNAINTVSLGILDSSIVHPREVFKPAILSNAASVIVGHNHPSGDPEPSPEDVAV 111 Query: 63 TQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97 T+ ++ L I V DHI+IG FVS K ++ Sbjct: 112 TRRLVDAGKILGIDVLDHIVIGDEGRFVSLKARELL 147 >gi|312977321|ref|ZP_07789069.1| DNA repair protein, RadC family protein [Lactobacillus crispatus CTV-05] gi|310895752|gb|EFQ44818.1| DNA repair protein, RadC family protein [Lactobacillus crispatus CTV-05] Length = 201 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 51/95 (53%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L +I+D++ GT+++ + + IV+ A + I+VHNHPSG+ PS AD+ M Sbjct: 105 LSNQGQIISDDLVGSGTVENSAISVPLIVKTLCLNGAANFIVVHNHPSGSMKPSKADLKM 164 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T +I + + + DH I+G + SF ++ Sbjct: 165 TDSIKNLSELIKVRMLDHFIVGNGNYFSFAEHGLL 199 >gi|282859078|ref|ZP_06268210.1| DNA repair protein RadC [Prevotella bivia JCVIHMP010] gi|282588158|gb|EFB93331.1| DNA repair protein RadC [Prevotella bivia JCVIHMP010] Length = 225 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L ++++ LI + S G I V +R I++ L +AT I HNHPS N PS D Sbjct: 129 LLMNQNYKLIEAKRISCGGITETAVDVRLILKEALLKNATVIAFCHNHPSNNIKPSSQDD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L I + DH+II A+ S+ + Sbjct: 189 RLTEQLKKGAELLRIHLVDHVIITDGAYYSYCEDGRL 225 >gi|255029557|ref|ZP_05301508.1| DNA repair protein RadC [Listeria monocytogenes LO28] Length = 80 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 31/79 (39%), Positives = 47/79 (59%) Query: 18 GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77 G ++ V+ RE+ + L SA SI+ HNHPSG+P PS D+ +T+ + N + I + Sbjct: 1 GGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPTPSSEDLLVTKRLAEAGNIVGITL 60 Query: 78 HDHIIIGKDAFVSFKGLRI 96 DHIIIGK+ ++S K Sbjct: 61 LDHIIIGKNKYISLKEKGY 79 >gi|238924108|ref|YP_002937624.1| DNA repair protein RadC [Eubacterium rectale ATCC 33656] gi|238875783|gb|ACR75490.1| DNA repair protein RadC [Eubacterium rectale ATCC 33656] Length = 229 Score = 103 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 56/96 (58%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 + D + + D+ S+G++ V I I++ L+ +A+ ++L+HNHPSG+ PS DI Sbjct: 134 YFDVKSRFLGDKFISKGSLSSSVVDIGSIIRTALDKNASKLVLLHNHPSGDCTPSRNDIA 193 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I +I + DHIIIG + + SF ++I Sbjct: 194 VTDRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229 >gi|291524848|emb|CBK90435.1| DNA replication and repair protein RadC [Eubacterium rectale DSM 17629] Length = 229 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 56/96 (58%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 + D + + D+ S+G++ V + I++ L+ +A+ ++L+HNHPSG+ PS DI Sbjct: 134 YFDVKSRFLGDKFISKGSLSSSVVDVGSIIRTALDKNASKLVLLHNHPSGDCTPSRNDIA 193 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I +I + DHIIIG + + SF ++I Sbjct: 194 VTDRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229 >gi|295090558|emb|CBK76665.1| DNA repair proteins [Clostridium cf. saccharolyticum K10] Length = 172 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD +A E+ + G + V ++ I + + +A+ +I HNHPSG PS+ D+ Sbjct: 70 LDSKLEPMAMEIAAVGGVSSCLVDMKSIFRHAILNNASYVICFHNHPSGECEPSNEDLKT 129 Query: 63 TQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 Q + L + + DHIIIG + F+S + + Sbjct: 130 AQRMEEAGKLLGLPLVDHIIIGAEGRFLSLAEMGAL 165 >gi|291528989|emb|CBK94575.1| DNA replication and repair protein RadC [Eubacterium rectale M104/1] Length = 229 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 56/96 (58%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 + D + + D+ S+G++ V I I++ L+ +A+ ++L+HNHPSG+ PS DI Sbjct: 134 YFDVKSRFLGDKFISKGSLSSSVVDIGSIIRTALDKNASKLVLLHNHPSGDCTPSRNDIA 193 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I +I + DHIIIG + + SF ++I Sbjct: 194 VTDRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229 >gi|148652303|ref|YP_001279396.1| DNA repair protein RadC [Psychrobacter sp. PRwf-1] gi|172048495|sp|A5WCQ5|Y491_PSYWF RecName: Full=UPF0758 protein PsycPRwf_0491 gi|148571387|gb|ABQ93446.1| DNA repair protein RadC [Psychrobacter sp. PRwf-1] Length = 226 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 54/93 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD L+ +V G + V ++++++ LE A+ II+ HNHP+ + PS ADI Sbjct: 128 LCLDNGLNLLDYKVLFVGGLSSCSVCVKQVLRHALEQGASQIIIAHNHPNQDATPSAADI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 ++TQ + +++ + DHII+G++ +SF Sbjct: 188 HLTQTLKLACEAIDLRLTDHIIVGRNQTLSFAE 220 >gi|269121533|ref|YP_003309710.1| DNA repair protein RadC [Sebaldella termitidis ATCC 33386] gi|268615411|gb|ACZ09779.1| DNA repair protein RadC [Sebaldella termitidis ATCC 33386] Length = 227 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 42/97 (43%), Positives = 58/97 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+ N LI DE GT+D V+ RE +++ LE A S+ILVHNHPSG PS++DI Sbjct: 131 LFLNTQNELIKDENLFYGTLDKSAVHPREFIKKVLENDAKSVILVHNHPSGALKPSESDI 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L L I + DHII+ + + SF I+ Sbjct: 191 LITSKLKHLLEKLEIKLLDHIIVSPNGYFSFLEGGIL 227 >gi|260880942|ref|ZP_05403206.2| DNA repair protein RadC [Mitsuokella multacida DSM 20544] gi|260849987|gb|EEX69994.1| DNA repair protein RadC [Mitsuokella multacida DSM 20544] Length = 158 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D + + V ++GT++ V+ RE+ Q CL +A + + HNHPSG+ PS D +T Sbjct: 59 DSKSKPLCVTVVTKGTLNCSLVHPREVFQPCLLANAAACFVFHNHPSGDVTPSREDKAIT 118 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 + ++ + L++ V DHII+G + F SF+ Sbjct: 119 ERLVKAGHILDVPVLDHIIVGDN-FYSFRTDG 149 >gi|169403143|emb|CAP17743.1| hypothetical protein [Staphylococcus pseudintermedius] Length = 294 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 33/90 (36%), Positives = 50/90 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N E S GTI+ ++ REI + + +AT +I+ HNHPSG+ PS DI Sbjct: 51 ICLNSKNEPTHIETVSIGTINFAVIHPREIFKTAILSNATGMIIGHNHPSGDITPSPGDI 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90 +TQ I + II++DHII ++ S Sbjct: 111 KITQRIKEISEMMGIILYDHIIFSENDHHS 140 >gi|67923800|ref|ZP_00517262.1| DNA repair protein RadC [Crocosphaera watsonii WH 8501] gi|67854343|gb|EAM49640.1| DNA repair protein RadC [Crocosphaera watsonii WH 8501] Length = 242 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 52/91 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD L+ +V + GT V EI + L+ A ++I+ HNHPSGN PS D+ Sbjct: 139 VFLDSKYRLLGTKVINIGTATESLVDATEIFRETLKQGANALIVAHNHPSGNVEPSQEDL 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91 ++T+ ++ + L+I + DH+I+G+ S Sbjct: 199 DLTEQLLKGMQLLHIPLIDHLILGEGNHCSL 229 >gi|167933132|ref|ZP_02520219.1| DNA repair protein RadC [candidate division TM7 single-cell isolate TM7b] Length = 92 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 37/88 (42%), Positives = 49/88 (55%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD N LIA V + GT+ V+ RE+ + A SII+ HNHPSG+ S AD ++ Sbjct: 3 LDGANRLIAKRVVTIGTLTASLVHPREVFADAIADRAASIIVAHNHPSGSLEASQADKDV 62 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVS 90 T + L I ++DHIII K FVS Sbjct: 63 TSRLAEAGRLLGITLNDHIIITKTDFVS 90 >gi|323342146|ref|ZP_08082379.1| DNA repair protein RadC [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464571|gb|EFY09764.1| DNA repair protein RadC [Erysipelothrix rhusiopathiae ATCC 19414] Length = 235 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 53/94 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL N LI +GT D V+ R++ + + +A+ I+LVHNHP G+ + S+AD+ Sbjct: 135 LFLSTQNNLIRYLDLFKGTADKSLVHPRDVFREAVRCNASRIVLVHNHPGGSLSASEADV 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ +I + I V DHII+ VS + L Sbjct: 195 EVTRALIEVGMMIGIEVVDHIIVTSTNSVSLRNL 228 >gi|257456116|ref|ZP_05621317.1| DNA repair protein RadC [Treponema vincentii ATCC 35580] gi|257446502|gb|EEV21544.1| DNA repair protein RadC [Treponema vincentii ATCC 35580] Length = 222 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + + A V S GT+ H V+ RE+ L A ++I+ HNHPSG+ PS D+ + Sbjct: 125 LNGAHEISAIRVVSVGTLTHTLVHPREVFADPLADRAAAVIIAHNHPSGSLEPSVEDLTL 184 Query: 63 TQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRI 96 T+ + N L I V DHII+ ++SF Sbjct: 185 TRRLYQAGNLLGIEVLDHIILSPNGEYLSFIESGF 219 >gi|145589913|ref|YP_001156510.1| DNA repair protein RadC [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048319|gb|ABP34946.1| DNA replication and repair protein RadC [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 239 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 35/83 (42%), Positives = 53/83 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD LI + RG+I VY REI++ L +A+++I+ HNHPSGNP PS AD Sbjct: 139 LYLDPRLHLIECQELFRGSITQTAVYPREILKEALSRNASALIVAHNHPSGNPLPSQADQ 198 Query: 61 NMTQNIITTLNPLNIIVHDHIII 83 ++TQ ++ L ++I + DH I+ Sbjct: 199 DLTQTLLKALQWVDISLLDHCIV 221 >gi|163753959|ref|ZP_02161082.1| putative DNA repair protein [Kordia algicida OT-1] gi|161326173|gb|EDP97499.1| putative DNA repair protein [Kordia algicida OT-1] Length = 144 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 59/97 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ N+++ S+G + V ++ I+ L+ A+SI+L+HNHPSG PS+ D Sbjct: 48 MLLNRANVILGIYDLSKGGVASCSVDLKIILSIALKGHASSIVLLHNHPSGKLEPSNNDK 107 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + + L++++ DH+II K++F SF I+ Sbjct: 108 IITKKLKKACSYLDLVLLDHLIITKNSFYSFNDNNIL 144 >gi|302327620|gb|ADL26821.1| DNA repair protein RadC [Fibrobacter succinogenes subsp. succinogenes S85] Length = 228 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 35/89 (39%), Positives = 50/89 (56%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +I + G ++ PV+ RE +E A S+I VHNHPSG+ PS D+++ Sbjct: 126 LNSANYIIRVHELTTGLVNQTPVHPREAFALAIEDRAVSVIFVHNHPSGSLEPSPEDMSI 185 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSF 91 T+ + + L I V DHIIIGK F S Sbjct: 186 TRVLCASGKILQIPVLDHIIIGKSGFTSL 214 >gi|261416893|ref|YP_003250576.1| DNA repair protein RadC [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373349|gb|ACX76094.1| DNA repair protein RadC [Fibrobacter succinogenes subsp. succinogenes S85] Length = 233 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 35/89 (39%), Positives = 50/89 (56%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +I + G ++ PV+ RE +E A S+I VHNHPSG+ PS D+++ Sbjct: 131 LNSANYIIRVHELTTGLVNQTPVHPREAFALAIEDRAVSVIFVHNHPSGSLEPSPEDMSI 190 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSF 91 T+ + + L I V DHIIIGK F S Sbjct: 191 TRVLCASGKILQIPVLDHIIIGKSGFTSL 219 >gi|259502841|ref|ZP_05745743.1| DNA repair protein RadC [Lactobacillus antri DSM 16041] gi|259169208|gb|EEW53703.1| DNA repair protein RadC [Lactobacillus antri DSM 16041] Length = 212 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 47/92 (51%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 D HN +I + +G +Y +I L SAT I +VHNHPSG+ PSD D+ Sbjct: 113 CTDVHNDVIDYKTVFKGGHSECLLYPDQIFAYALRQSATGIAMVHNHPSGDVKPSDQDLR 172 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 + + L I + D +I+G++ + S++ Sbjct: 173 FAKRLERGSRILGIQLLDFLIVGQERYFSWRE 204 >gi|88801917|ref|ZP_01117445.1| putative DNA repair protein [Polaribacter irgensii 23-P] gi|88782575|gb|EAR13752.1| putative DNA repair protein [Polaribacter irgensii 23-P] Length = 149 Score = 102 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 51/94 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ N ++ S+G+ V ++ + L+ +AT II+ HNHPS N PS +D+ Sbjct: 53 LLLNNANEVLGIHALSKGSTRGTVVDLKLLFVIALKSNATGIIIAHNHPSSNLKPSRSDL 112 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ I + L+I + DH+II KD F S Sbjct: 113 ELTKRIKKSGELLDIKLLDHLIITKDEFYSLSDN 146 >gi|329769004|ref|ZP_08260427.1| hypothetical protein HMPREF0433_00191 [Gemella sanguinis M325] gi|328835811|gb|EGF85534.1| hypothetical protein HMPREF0433_00191 [Gemella sanguinis M325] Length = 258 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 51/89 (57%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 + +I +G++ V+ RE+ + ++ SA SI+ +HNHPSG+ PS DI T Sbjct: 134 NTKGKIIQQREVFKGSLSTSIVHSREVFKMAIKNSAASIVCIHNHPSGDATPSVEDIRTT 193 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 N++ + + I + DHIII K+ +VS + Sbjct: 194 INLMEVGDIIGIEMLDHIIIAKEGYVSIR 222 >gi|327441404|dbj|BAK17769.1| DNA repair protein [Solibacillus silvestris StLB046] Length = 154 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 50/93 (53%) Query: 5 KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQ 64 N +V G+I+ V+ R++++ + + S ++ HNHPS + PS DI++T+ Sbjct: 62 TKNEPQVIQVVHTGSINASIVHPRDVMKALILANCASCVVGHNHPSNDVTPSPEDIDVTE 121 Query: 65 NIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++ L I V DH+I+ + F+SFK + Sbjct: 122 RLVEAGKILGIDVLDHVILSSNTFLSFKEKGYM 154 >gi|325953769|ref|YP_004237429.1| DNA repair protein RadC [Weeksella virosa DSM 16922] gi|323436387|gb|ADX66851.1| DNA repair protein RadC [Weeksella virosa DSM 16922] Length = 153 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL++ N ++ V + G V ++ L A S+I+ HNHPSGN PS AD Sbjct: 57 IFLNQANHVLGFRVLNTGMRSTSLVDKPLLISLALGCRAASVIIAHNHPSGNLQPSIADR 116 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ+I +I + DH II D SF I+ Sbjct: 117 ELTQDIKRKCEFFDIKLLDHFIITSDGHYSFAINNIL 153 >gi|189485402|ref|YP_001956343.1| DNA repair protein RadC [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287361|dbj|BAG13882.1| DNA repair protein RadC [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 229 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N + GT++ + R+I + L+ A S+++ HNHP G PS DI Sbjct: 133 ILLNSGNRVTDCLEIESGTVNKSLLIPRKIAEIALKCRAASVVIAHNHPGGTLKPSQNDI 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N T + L + I + DHIII + + SFK +I Sbjct: 193 NATVAVKKALESIEISLLDHIIISNNNYFSFKEYSLI 229 >gi|323704266|ref|ZP_08115845.1| DNA repair protein RadC [Thermoanaerobacterium xylanolyticum LX-11] gi|323536332|gb|EGB26104.1| DNA repair protein RadC [Thermoanaerobacterium xylanolyticum LX-11] Length = 234 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 57/96 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +IA + S G+++ V+ RE+ + +E SA+SII+VHNHPSG+P PS D+ Sbjct: 134 VLLNVKNKVIAVDTVSIGSLNTSIVHPREVFKAAIERSASSIIMVHNHPSGDPTPSREDV 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++ I N + I V DHIIIG +S K Sbjct: 194 EVSDRIYKGGNLIGIKVLDHIIIGDGIGISLKEKGY 229 >gi|93006943|ref|YP_581380.1| DNA repair protein RadC [Psychrobacter cryohalolentis K5] gi|123386568|sp|Q1Q8V7|Y2119_PSYCK RecName: Full=UPF0758 protein Pcryo_2119 gi|92394621|gb|ABE75896.1| DNA repair protein RadC [Psychrobacter cryohalolentis K5] Length = 227 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 51/96 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD LI E+ G I V I+ +++ L +A+ +I+ HNHP + PS AD Sbjct: 128 LCLDNALNLINFEILFTGGISSCSVCIKHVLRHALSHAASQLIIAHNHPHTDAKPSTADN 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T + + +++ + DH+I+G++ +S+ + Sbjct: 188 LLTYELKKACDLIDLSLIDHVIVGRNETLSYAENSL 223 >gi|220904890|ref|YP_002480202.1| DNA repair protein RadC [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869189|gb|ACL49524.1| DNA repair protein RadC [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 229 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 49/94 (52%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D+ N L A E +G + VPV R++ + L A+ II+VHNHP GNP PS+AD T Sbjct: 136 DQRNRLTAWERLRQGGVAEVPVQPRDVFEAALLRKASGIIVVHNHPGGNPAPSEADKTFT 195 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + L + DH+I+ + S ++ I Sbjct: 196 AELQRLAPQLGLRFLDHVIVTEGDCYSITQMQTI 229 >gi|158522103|ref|YP_001529973.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3] gi|158510929|gb|ABW67896.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3] Length = 223 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 45/91 (49%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 + N +++ V S G I+ V+ RE+ L A+++I+ HNHP G+ PS DI +T Sbjct: 130 NGANEVMSVRVVSIGLINKTQVHPREVFADVLAERASAVIVAHNHPHGDLAPSREDIQVT 189 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 + + L + DHII + SF Sbjct: 190 RQLKDAAQTLGLTFLDHIIFNTTGYYSFAEQ 220 >gi|94264365|ref|ZP_01288156.1| DNA repair protein RadC [delta proteobacterium MLMS-1] gi|93455194|gb|EAT05410.1| DNA repair protein RadC [delta proteobacterium MLMS-1] Length = 243 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD ++A E + GT+ V+ RE+V L A ++IL HNHPSGN PS D Sbjct: 134 IYLDASYGILALEELAVGTLTAATVHPREVVAAALRHKAAAVILAHNHPSGNLQPSTQDR 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97 +T+ + L I + DH +IG + SF ++ Sbjct: 194 QLTRRLFLALAFCEIQLLDHCVIGGEERPYSFADHGLM 231 >gi|94268846|ref|ZP_01291300.1| DNA repair protein RadC [delta proteobacterium MLMS-1] gi|94270555|ref|ZP_01291766.1| DNA repair protein RadC [delta proteobacterium MLMS-1] gi|93450762|gb|EAT01820.1| DNA repair protein RadC [delta proteobacterium MLMS-1] gi|93451446|gb|EAT02288.1| DNA repair protein RadC [delta proteobacterium MLMS-1] Length = 243 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD ++A E + GT+ V+ RE+V L A ++IL HNHPSGN PS D Sbjct: 134 IYLDASYGILALEELAVGTLTAATVHPREVVAAALRHKAAAVILAHNHPSGNLQPSTQDR 193 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97 +T+ + L I + DH +IG + SF ++ Sbjct: 194 QLTRRLFLALAFCEIQLLDHCVIGGEERPYSFADHGLM 231 >gi|260911031|ref|ZP_05917667.1| DNA repair protein RadC [Prevotella sp. oral taxon 472 str. F0295] gi|260634835|gb|EEX52889.1| DNA repair protein RadC [Prevotella sp. oral taxon 472 str. F0295] Length = 230 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L ++++ LI S G I V +R I++ L + T + L HNHPS N +PS AD Sbjct: 129 LLMNQNYKLIKAFRVSHGGISETAVDVRVIMREALLNNTTILALCHNHPSNNASPSAADD 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + I DHII+ ++ S+ + Sbjct: 189 RLTQIVKNACETMRIHFLDHIIVTDGSYYSYHEAGRL 225 >gi|330837363|ref|YP_004412004.1| DNA repair protein RadC [Spirochaeta coccoides DSM 17374] gi|329749266|gb|AEC02622.1| DNA repair protein RadC [Spirochaeta coccoides DSM 17374] Length = 228 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 52/93 (55%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ + +I+ +V S G ++ V+ RE+ ++ A ++I+ HNHPSGN PS D+++ Sbjct: 134 LNGAHEVISVDVVSIGLVNRTLVHPREVFALPMKNRAVAVIVAHNHPSGNLTPSPEDLDV 193 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 T + + + I V DH+I +++F S Sbjct: 194 THRLKIAGDVVGINVLDHLIFSEESFYSLLEGG 226 >gi|146301504|ref|YP_001196095.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101] gi|146155922|gb|ABQ06776.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101] Length = 155 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L++ N ++ S G I V +R + L+ A +I+ HNHPSGN PS+ D Sbjct: 59 LLLNQSNKVLGIYEVSSGGITSTVVDVRLLFAAALKAGAAGLIIAHNHPSGNVLPSEPDK 118 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ I L+I + DH+I+ + + SF + Sbjct: 119 HITKKISMAGEVLDIKLLDHLIVTSEHYYSFADQGAL 155 >gi|325267779|ref|ZP_08134429.1| DNA repair protein RadC [Kingella denitrificans ATCC 33394] gi|324980660|gb|EGC16322.1| DNA repair protein RadC [Kingella denitrificans ATCC 33394] Length = 237 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 39/97 (40%), Positives = 54/97 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD LIA E SRGT+ +Y+RE+ +R L A S++L HNHPSG+ PS D Sbjct: 140 LFLDAQQRLIACEELSRGTVAENALYVREVAKRALHHHAVSVLLAHNHPSGDVQPSAEDC 199 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L L+I + DHII+ SF ++ Sbjct: 200 AATERLQAALQLLDIQLLDHIIVAAQDTFSFAQHGLL 236 >gi|88608186|ref|YP_506123.1| DNA repair protein RadC [Neorickettsia sennetsu str. Miyayama] gi|88600355|gb|ABD45823.1| DNA repair protein RadC [Neorickettsia sennetsu str. Miyayama] Length = 236 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 57/97 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+K LI + VQ G DH P+ +REI+++CL A+++++ HNHPSGNP PS D+ Sbjct: 140 LFLNKKYTLIREYVQELGAADHTPLCMREIIKKCLTCGASAMVIAHNHPSGNPLPSQEDL 199 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + +++ + DH I+ SF ++ Sbjct: 200 LITGKLKKICQKVDVQLVDHFIVTPHDHFSFVVNGLL 236 >gi|42521845|ref|NP_967225.1| putative DNA repair protein [Bdellovibrio bacteriovorus HD100] gi|39574376|emb|CAE77880.1| putative DNA repair protein [Bdellovibrio bacteriovorus HD100] Length = 170 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 52/94 (55%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD L+ E+ RGT+D ++ R+I + ++ +A+S IL HNHPS N PS+ D+ + Sbjct: 62 LDSQMNLVLKEMLFRGTVDFCMIHPRDIFRCLVQANASSFILAHNHPSQNVLPSEQDLIL 121 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 T+ I I ++DH+++ ++ + S Sbjct: 122 TRRIHQLAQMFEIPLNDHLVVCENNYFSMADHGY 155 >gi|225378256|ref|ZP_03755477.1| hypothetical protein ROSEINA2194_03917 [Roseburia inulinivorans DSM 16841] gi|260438678|ref|ZP_05792494.1| DNA repair protein RadC [Butyrivibrio crossotus DSM 2876] gi|225209919|gb|EEG92273.1| hypothetical protein ROSEINA2194_03917 [Roseburia inulinivorans DSM 16841] gi|292808879|gb|EFF68084.1| DNA repair protein RadC [Butyrivibrio crossotus DSM 2876] Length = 179 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L I S G+++ + RE+ + + +A S++L+H HPSGN PS AD M Sbjct: 55 LSSDLKPINVHFASVGSLNEAMAHPRELFKSSILSNAASMMLIHCHPSGNIFPSKADTMM 114 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDA--FVSFKGLRII 97 T + + I + DHII+G D F SFK +I Sbjct: 115 TDRMNKLCELIGIPLLDHIIVGGDNRAFFSFKEKGMI 151 >gi|99035915|ref|ZP_01314963.1| hypothetical protein Wendoof_01000193 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 218 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+K L+ +E G ++ PVYI+EI+++ L +AT II+ HNHP G+ PS+ D Sbjct: 123 LYLNKRRQLVGEES-YIGEMEKAPVYIKEIIRKALIKNATLIIMSHNHPGGSLEPSEEDQ 181 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ + +++ + DHIII + SFK ++ Sbjct: 182 AVTKSLAAACSTVSVKLFDHIIITSGGYFSFKESGLL 218 >gi|28189060|dbj|BAC56212.1| putative DNA repair protein [Streptococcus suis] Length = 215 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 51/83 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I+ + G+++ REI+ ++ ATSII+VHNHPSG+ PS D+ Sbjct: 129 LYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDL 188 Query: 61 NMTQNIITTLNPLNIIVHDHIII 83 T+N+ + L +++ DH+I+ Sbjct: 189 LFTENLKESCEKLGLVLLDHLIV 211 >gi|320352527|ref|YP_004193866.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032] gi|320121029|gb|ADW16575.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032] Length = 245 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD + +I V + GT+ VY RE+V+ L +A+++++ HNHPSG+ PS D Sbjct: 133 VFLDAAHGIIDAAVVAEGTVTVNTVYPRELVKAALARNASALVIAHNHPSGSLTPSRQDE 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 +T+++ + ++I + DH+IIG D SF I+ Sbjct: 193 ELTRSLHLICSFMHINLLDHLIIGASDQVYSFADQGIM 230 >gi|288561648|ref|YP_003429054.1| DNA repair protein radC-like protein [Bacillus pseudofirmus OF4] gi|288548280|gb|ADC52162.1| DNA repair protein radC-like protein [Bacillus pseudofirmus OF4] Length = 206 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 49/94 (52%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FL+ N +I + S G +D V R I++ L +SA I+ VHNHPSG S D+ Sbjct: 110 FLNVKNHVILKKTISIGGLDSTLVDTRIILREALRVSAAKIVAVHNHPSGIALFSTNDLV 169 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ + + + ++I DH+IIG F S Sbjct: 170 VTKKLKSACDAVDIEFFDHVIIGDGTFSSLINEG 203 >gi|300726257|ref|ZP_07059710.1| DNA repair protein RadC [Prevotella bryantii B14] gi|299776454|gb|EFI73011.1| DNA repair protein RadC [Prevotella bryantii B14] Length = 230 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + ++++ LI S G I V IR I++ + +AT + L+HNHPS NPNPS D Sbjct: 133 ILMNQNYKLIKAIRISHGGISETAVDIRIIMKEAILSNATVLALIHNHPSNNPNPSRQDD 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + + I DH+I+ + S++ I Sbjct: 193 RLTERVMKACDIMRIYFLDHVIVTDGVYYSYREAHHI 229 >gi|218134697|ref|ZP_03463501.1| hypothetical protein BACPEC_02600 [Bacteroides pectinophilus ATCC 43243] gi|217990082|gb|EEC56093.1| hypothetical protein BACPEC_02600 [Bacteroides pectinophilus ATCC 43243] Length = 179 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L I S G+++ + RE+ + + +A S++L+H HPSGN PS AD M Sbjct: 55 LSSDLKPINVHFASVGSLNEAMAHPRELFKASILSNAASMMLIHCHPSGNIFPSKADTMM 114 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDA--FVSFKGLRII 97 T + + I + DHII+G D F SFK +I Sbjct: 115 TDRMNKLCELIGIPLLDHIIVGGDNRAFFSFKEKGMI 151 >gi|317495680|ref|ZP_07954045.1| DNA repair protein RadC [Gemella moribillum M424] gi|316914133|gb|EFV35614.1| DNA repair protein RadC [Gemella moribillum M424] Length = 258 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 30/89 (33%), Positives = 52/89 (58%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D ++ +G++ V+ RE+ + ++ SA SI+ VHNHPSG+P PS D+ T Sbjct: 134 DTKGKILEKREVFKGSLAMSVVHPREVFKNAIKNSAASIVCVHNHPSGDPTPSIEDLLTT 193 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 N+I + + I + DHI++ K+ +VS + Sbjct: 194 INLIEVGDVVGIEMLDHIVVAKEGYVSIR 222 >gi|319425169|gb|ADV53243.1| DNA repair protein RadC [Shewanella putrefaciens 200] Length = 147 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 55/91 (60%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L + + EV + G+++ + + E+++ + L+ S+ILVHNHPSG+P PS +DI Sbjct: 51 LTNQHTINCVEVVATGSVNGISMRPVEVLRTAVILNMPSVILVHNHPSGDPTPSTSDIQF 110 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 T+ +I L+I V DH+IIG + F S + Sbjct: 111 TRKVIECAKVLDINVLDHVIIGLNRFTSLRE 141 >gi|229093550|ref|ZP_04224652.1| DNA repair protein radC [Bacillus cereus Rock3-42] gi|228689880|gb|EEL43685.1| DNA repair protein radC [Bacillus cereus Rock3-42] Length = 208 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 44/78 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVH 78 +T+ ++ + I + Sbjct: 189 EVTKRLVECGRIIGIEML 206 >gi|227432969|ref|ZP_03914908.1| possible DNA repair protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351270|gb|EEJ41557.1| possible DNA repair protein [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 98 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 51/96 (53%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD +I EV GT+ V REI QR L+ +A ++ HNHPSGN PS+ADI Sbjct: 1 MLDTQLNVIGWEVVFVGTLSQVQTSPREIFQRVLKANAFGFMIAHNHPSGNIMPSNADIT 60 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +Q + + +++ + D I+ ++ + S + + Sbjct: 61 FSQRLAIIGHQMDLRLFDSFIVTQNEYWSMSENQQL 96 >gi|196039378|ref|ZP_03106684.1| DNA repair protein [Bacillus cereus NVH0597-99] gi|196030005|gb|EDX68606.1| DNA repair protein [Bacillus cereus NVH0597-99] Length = 208 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 44/78 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVH 78 +T+ ++ + I + Sbjct: 189 EVTKRLVECGRIIGIEML 206 >gi|304383349|ref|ZP_07365815.1| DNA repair protein RadC [Prevotella marshii DSM 16973] gi|304335517|gb|EFM01781.1| DNA repair protein RadC [Prevotella marshii DSM 16973] Length = 232 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L ++++ LI S G + + +R +++ L +AT++ LVHNHPS +P PS D Sbjct: 136 LLMNQNYRLIRPFRISHGGLSDTFIDVRIVIREALLCNATTLALVHNHPSNHPQPSHQDD 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T+ I + +++ DHIII + S+ + Sbjct: 196 SITRQIKAACDTMHLHFLDHIIIVDGRYYSYCEEGRL 232 >gi|149278589|ref|ZP_01884725.1| DNA repair protein [Pedobacter sp. BAL39] gi|149230584|gb|EDM35967.1| DNA repair protein [Pedobacter sp. BAL39] Length = 155 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L +DK ++ G +D V V + + + A++I+L HNHPSG PS ADI Sbjct: 57 LLIDKRMSVLGIVTIGSGGLDGVYVDPKMVFAPAIISGASAIVLAHNHPSGEVTPSPADI 116 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +++T L++ V DH+I+ + + SF ++I Sbjct: 117 KLTNDLVTLGEILHVKVLDHLIVTRGHYFSFIDNQLI 153 >gi|312870434|ref|ZP_07730554.1| DNA repair protein RadC [Lactobacillus oris PB013-T2-3] gi|311093991|gb|EFQ52315.1| DNA repair protein RadC [Lactobacillus oris PB013-T2-3] Length = 205 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 50/95 (52%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 D HN +I + +G +Y +I L SAT I++VHNHPSG+ PS+ D+ Sbjct: 110 CTDVHNDVIDYKTVFKGGQSECLLYPDQIFAYALRQSATGIVMVHNHPSGDVKPSEQDLR 169 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 + + L + + D +I+G++ + S++ ++ Sbjct: 170 FAKRLERGSRILGLQMLDFLIVGQEQYFSWRESQL 204 >gi|296111237|ref|YP_003621619.1| DNA repair protein [Leuconostoc kimchii IMSNU 11154] gi|295832769|gb|ADG40650.1| DNA repair protein [Leuconostoc kimchii IMSNU 11154] Length = 203 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 49/96 (51%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD +I E GT+ HV REI QR L+ +A ++VHNHPSGN PSDADI Sbjct: 104 LLDAQLNVIGWETVFVGTLTHVQASPREIFQRVLQANALGFMIVHNHPSGNLKPSDADIQ 163 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +Q + + + D I+ +D++ S + Sbjct: 164 FSQRLKVLGEQMASPMFDSFIVTRDSYWSMSENNQL 199 >gi|315641661|ref|ZP_07896724.1| DNA repair protein RadC [Enterococcus italicus DSM 15952] gi|315482589|gb|EFU73121.1| DNA repair protein RadC [Enterococcus italicus DSM 15952] Length = 153 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L+ ++ G+++ REIV+ L +A +II+ HNHPS + PS D Sbjct: 53 CLNTKGEVVNISTVHIGSVNQSLAVPREIVKTALLCNAVNIIVAHNHPSNSTEPSREDRR 112 Query: 62 MTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLR 95 T+N++ L I + DHIII ++ S + Sbjct: 113 FTKNLLDACQLLQIGLRDHIIIAADGSYSSMRRDG 147 >gi|126175757|ref|YP_001051906.1| DNA repair protein RadC [Shewanella baltica OS155] gi|125998962|gb|ABN63037.1| DNA repair protein RadC [Shewanella baltica OS155] Length = 147 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 55/91 (60%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L + + EV + G+++ + + E+++ + L+ S+ILVHNHPSG+P PS +DI Sbjct: 51 LTTQHTINCVEVVATGSVNGISMRPVEVLRTAVILNMPSVILVHNHPSGDPTPSTSDIQF 110 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 T+ +I L+I V DH+IIG + F S + Sbjct: 111 TRKVIECAKVLDINVLDHVIIGLNRFTSLRE 141 >gi|292670113|ref|ZP_06603539.1| DNA repair protein RadC [Selenomonas noxia ATCC 43541] gi|292648301|gb|EFF66273.1| DNA repair protein RadC [Selenomonas noxia ATCC 43541] Length = 85 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 43/81 (53%) Query: 15 QSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLN 74 S GT+ + V+ RE+ + + A II HNHPSG+P PS D +T+ + L Sbjct: 3 VSAGTLTNTLVHPREVFEPAIRCGAAHIIAAHNHPSGDPAPSAEDHRLTRVLCEAGKVLG 62 Query: 75 IIVHDHIIIGKDAFVSFKGLR 95 I V DH+I+ D+F SF Sbjct: 63 IPVTDHVIVAGDSFFSFAEAG 83 >gi|162447226|ref|YP_001620358.1| DNA repair protein [Acholeplasma laidlawii PG-8A] gi|161985333|gb|ABX80982.1| DNA repair protein [Acholeplasma laidlawii PG-8A] Length = 217 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 55/95 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD L+ +E GT + V ++++ + + + A II+VHNHPSG+ PS AD Sbjct: 119 LCLDIKGNLLKNETIYMGTTSSIQVSVKDLFKSAVRIGAFGIIVVHNHPSGDSTPSQADD 178 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T+ I L+I + DHIIIG++ F S++ R Sbjct: 179 KLTKLIKNAGEVLSIELIDHIIIGRNEFFSYRRQR 213 >gi|298479820|ref|ZP_06998020.1| DNA repair protein RadC [Bacteroides sp. D22] gi|298274210|gb|EFI15771.1| DNA repair protein RadC [Bacteroides sp. D22] Length = 154 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ N ++ S G I V +R I+Q L +AT +IL HNHPSG+ PS D Sbjct: 57 VLLNQSNRVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 116 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 +T+ + + I V DH+I+ + + S+ + Sbjct: 117 ALTEKVKKAAELMEIHVADHVILSPEKEYYSYYDEGKL 154 >gi|210610373|ref|ZP_03288378.1| hypothetical protein CLONEX_00568 [Clostridium nexile DSM 1787] gi|240147637|ref|ZP_04746238.1| DNA repair protein RadC [Roseburia intestinalis L1-82] gi|283795835|ref|ZP_06344988.1| DNA repair protein RadC [Clostridium sp. M62/1] gi|210152523|gb|EEA83529.1| hypothetical protein CLONEX_00568 [Clostridium nexile DSM 1787] gi|257200164|gb|EEU98448.1| DNA repair protein RadC [Roseburia intestinalis L1-82] gi|291076466|gb|EFE13830.1| DNA repair protein RadC [Clostridium sp. M62/1] gi|291525593|emb|CBK91180.1| DNA repair proteins [Eubacterium rectale DSM 17629] gi|291526642|emb|CBK92228.1| DNA repair proteins [Eubacterium rectale M104/1] gi|291536727|emb|CBL09839.1| DNA repair proteins [Roseburia intestinalis M50/1] gi|291540190|emb|CBL13301.1| DNA repair proteins [Roseburia intestinalis XB6B4] Length = 179 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 2/92 (2%) Query: 8 ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNII 67 I S G+++ + RE+ + + +A S++L+H HPSGN PS AD MT + Sbjct: 60 KPINVHFASVGSLNEAMAHPRELFKSSILSNAASMMLIHCHPSGNVFPSKADTMMTDRMN 119 Query: 68 TTLNPLNIIVHDHIIIGKD--AFVSFKGLRII 97 + I + DHII+G D F SF+ +I Sbjct: 120 KLCELMGIPLIDHIIVGGDNREFFSFREKGMI 151 >gi|229175136|ref|ZP_04302652.1| DNA repair protein radC [Bacillus cereus MM3] gi|228608272|gb|EEK65578.1| DNA repair protein radC [Bacillus cereus MM3] Length = 223 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 44/78 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 144 LYLNTKNQVIHRQTVFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 203 Query: 61 NMTQNIITTLNPLNIIVH 78 +T+ ++ + I + Sbjct: 204 EVTKRLVECGQIIGIELI 221 >gi|118479620|ref|YP_896771.1| DNA repair protein RadC [Bacillus thuringiensis str. Al Hakam] gi|118418845|gb|ABK87264.1| DNA replication and repair protein RadC [Bacillus thuringiensis str. Al Hakam] Length = 208 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 44/78 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188 Query: 61 NMTQNIITTLNPLNIIVH 78 +T+ ++ + I + Sbjct: 189 EVTKRLVECGRIIGIEIL 206 >gi|326693277|ref|ZP_08230282.1| DNA repair protein [Leuconostoc argentinum KCTC 3773] Length = 212 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 31/96 (32%), Positives = 50/96 (52%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD +I E G++ HV REI QR L+ +A +++HNHPSGN PSD+D+ Sbjct: 106 LLDAQLNVIGWETIFVGSLTHVQASPREIFQRVLKANALGFMMIHNHPSGNVTPSDSDLQ 165 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +Q + L + + D I+ D++ S + + Sbjct: 166 FSQQLQNLGTQLGMPMFDSFIVTGDSYWSMSENQQL 201 >gi|240145831|ref|ZP_04744432.1| DNA repair protein RadC [Roseburia intestinalis L1-82] gi|257202052|gb|EEV00337.1| DNA repair protein RadC [Roseburia intestinalis L1-82] Length = 158 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L I S G+++ + RE+ + + +A S++L+H HPSGN PS AD M Sbjct: 55 LSSDLKPINVHFASVGSLNEAMAHPRELFKSSILSNAASMMLIHCHPSGNIFPSKADTMM 114 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDA--FVSFKGLRII 97 T + + I + DHII+G D F SFK +I Sbjct: 115 TDRMNKLCELIGIPLLDHIIVGGDNRAFFSFKEKGMI 151 >gi|149276842|ref|ZP_01882985.1| DNA repair protein [Pedobacter sp. BAL39] gi|149232511|gb|EDM37887.1| DNA repair protein [Pedobacter sp. BAL39] Length = 155 Score = 100 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L +DK ++ G +D V V + + + A++I+L HNHPSG PS ADI Sbjct: 57 LLIDKRMSVLGIVTIGSGGLDGVYVDPKMVFAPAIISGASAIVLAHNHPSGEVTPSPADI 116 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +++T L++ V DH+I+ + + SF +I Sbjct: 117 KLTNDLVTLGEILHVKVLDHLIVTRGHYYSFIDNHLI 153 >gi|33596472|ref|NP_884115.1| DNA repair protein RadC [Bordetella parapertussis 12822] gi|39931840|sp|Q7W9B6|Y1850_BORPA RecName: Full=UPF0758 protein BPP1850 gi|33566241|emb|CAE37151.1| DNA repair protein [Bordetella parapertussis] Length = 225 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD LI +RGT+ +Y REIV+ L A ++IL HNHP G S ADI Sbjct: 129 LYLDARLKLIICAEVARGTLTQAQIYPREIVREALRHHAAALILAHNHPGGTAAASAADI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I L +++ + DH+I+ A VS + Sbjct: 189 AMTRQIRQALALVDVRLIDHVIVAGAATVSMAAQGHL 225 >gi|82523883|emb|CAI78606.1| DNA repair protein [uncultured delta proteobacterium] Length = 219 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 45/92 (48%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N ++ V + G ++ V+ RE+ + A+SII+ HNHPSG+ PS D Sbjct: 125 LNGANEVLNVRVITIGLVNKSQVHPREVFADVIVERASSIIIAHNHPSGSLTPSSEDRET 184 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 T I N L I + DHII + SF Sbjct: 185 TIRIKDAGNILGINLLDHIIFNNKGYYSFLEN 216 >gi|330997965|ref|ZP_08321799.1| DNA repair protein RadC [Paraprevotella xylaniphila YIT 11841] gi|329569569|gb|EGG51339.1| DNA repair protein RadC [Paraprevotella xylaniphila YIT 11841] Length = 147 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L++ L+ SR ID V IR ++Q L A+ IIL HNHPSG+ S D Sbjct: 51 MYLNRAGKLLGVSCISRSGIDCTVVDIRIVLQTALVSHASGIILSHNHPSGSTVASTQDN 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + + I + DHII+ +D ++S+ ++ Sbjct: 111 NLTSQLKKGCEAIGIRLLDHIILTEDTYLSYTDEGML 147 >gi|261881165|ref|ZP_06007592.1| DNA repair protein RadC [Prevotella bergensis DSM 17361] gi|270332033|gb|EFA42819.1| DNA repair protein RadC [Prevotella bergensis DSM 17361] Length = 228 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 45/97 (46%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L +++ LI S G + V IR I++ L + T + + HNHPSGN PS D Sbjct: 132 LLMNQAFKLIKAIPISHGGMTETAVDIRVIMKHALLNNTTVMAVCHNHPSGNTCPSMHDD 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I + I DH+II + S+ + Sbjct: 192 RLTQQIKRACETMRICFLDHVIITDGQYYSYHEEGKL 228 >gi|160890734|ref|ZP_02071737.1| hypothetical protein BACUNI_03179 [Bacteroides uniformis ATCC 8492] gi|237708245|ref|ZP_04538726.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|156859733|gb|EDO53164.1| hypothetical protein BACUNI_03179 [Bacteroides uniformis ATCC 8492] gi|229457798|gb|EEO63519.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 147 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L++ L+ SR ID V IR ++Q L A+ IIL HNHPSG+ S D Sbjct: 51 MYLNRAGKLLGVSCISRSGIDCTVVDIRIVLQTALVSHASGIILSHNHPSGSTVASTQDN 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + + I + DHII+ +D ++S+ ++ Sbjct: 111 NLTSQLKKGCEAIGIRLLDHIILTEDTYLSYTDEGML 147 >gi|330719369|ref|ZP_08313969.1| DNA repair protein [Leuconostoc fallax KCTC 3537] Length = 218 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 36/95 (37%), Positives = 51/95 (53%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD +I EV GT+ HV REI QR L +A ++VHNHPSGN PS ADI Sbjct: 115 LDAQLNIINWEVVFVGTLTHVQASPREIFQRLLRTNAYGFMIVHNHPSGNLKPSKADIQF 174 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +Q ++T ++I + D I+ D + S + + Sbjct: 175 SQKLVTLGQQMDIHMFDSFIVSCDGYWSMSENQQL 209 >gi|33602234|ref|NP_889794.1| DNA repair protein RadC [Bordetella bronchiseptica RB50] gi|39931851|sp|Q7WHF0|Y3258_BORBR RecName: Full=UPF0758 protein BB3258 gi|33576673|emb|CAE33750.1| DNA repair protein [Bordetella bronchiseptica RB50] Length = 225 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD LI +RGT+ +Y REIV+ L A ++IL HNHP G S ADI Sbjct: 129 LYLDARLKLIICAEVARGTLTQAQIYPREIVREALRHHAAALILAHNHPGGTAAASAADI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I L +++ + DH+I+ A VS + Sbjct: 189 AMTRQIRQALALIDVRLIDHVIVAGAATVSMAAQGHL 225 >gi|154482876|ref|ZP_02025324.1| hypothetical protein EUBVEN_00572 [Eubacterium ventriosum ATCC 27560] gi|149736304|gb|EDM52190.1| hypothetical protein EUBVEN_00572 [Eubacterium ventriosum ATCC 27560] Length = 180 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 2/97 (2%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L N I + S G+++ V REI + + +A ++L+HNHPSG+ PS DI + Sbjct: 55 LKSDNTPINCTMASMGSLNQSIVSPREIFKASILSNAAHMLLIHNHPSGSLKPSKEDIEI 114 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDA--FVSFKGLRII 97 T +I + + I + DHII+G D + S + I+ Sbjct: 115 TDRLIKLTDLMEIPLLDHIIVGGDEAQYFSMREKGIM 151 >gi|154483970|ref|ZP_02026418.1| hypothetical protein EUBVEN_01678 [Eubacterium ventriosum ATCC 27560] gi|149735012|gb|EDM50898.1| hypothetical protein EUBVEN_01678 [Eubacterium ventriosum ATCC 27560] Length = 178 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 + + + S G ID REI++ + +A +++++HNHPS PS DI T Sbjct: 51 NSKLQPLNFNLVSIGAIDTTIASPREILKSAILSNAANMMILHNHPSNILEPSKEDIRTT 110 Query: 64 QNIITTLNPLNIIVHDHIIIG--KDAFVSFKGLRII 97 ++ N + I + DHII+G K + S + +++ Sbjct: 111 AKLVDICNLVGIPLLDHIIVGPDKGRYFSLRDKQLV 146 >gi|103487967|ref|YP_617528.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256] gi|98978044|gb|ABF54195.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256] Length = 354 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 41/88 (46%), Positives = 54/88 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD LIADE +GTI HV +Y R I +R +EL A +IILVHNHPSG+P PS+AD+ Sbjct: 124 LFLDPARRLIADEQLQQGTIGHVAIYPRTIFRRAVELDAAAIILVHNHPSGDPTPSEADV 183 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAF 88 T + L I + +HI++ Sbjct: 184 ATTARLAAIGRALEIQLLEHIVVALRGH 211 >gi|258544459|ref|ZP_05704693.1| DNA repair protein RadC [Cardiobacterium hominis ATCC 15826] gi|258520300|gb|EEV89159.1| DNA repair protein RadC [Cardiobacterium hominis ATCC 15826] Length = 224 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 54/95 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ + IA E + G VPV +R+++ L A ++IL HNHP+G+ PS D Sbjct: 128 LFLNQQHGFIAFERLAAGAAAKVPVPVRQLIASALHHHAAAVILAHNHPAGSGAPSAEDR 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 ++T+++ L ++I + DH I+ + VS + Sbjct: 188 DVTRHLDDALALMDIRLLDHFIVAGNEMVSMRERG 222 >gi|217076565|ref|YP_002334281.1| DNA repair protein [Thermosipho africanus TCF52B] gi|217036418|gb|ACJ74940.1| DNA repair protein [Thermosipho africanus TCF52B] Length = 213 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ I+ + + G D + REI + ++ SA+ +++VHNHPSG+ PS D + Sbjct: 120 LNSKLYEISTKDITIGLTDTSLAHPREIYREAIKNSASYVVVVHNHPSGDVRPSKEDREV 179 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T I + I + DH+IIG + F SFK +++ Sbjct: 180 TLKIKKAGEIIGIKLLDHVIIG-NGFYSFKHNKLL 213 >gi|295136238|ref|YP_003586914.1| DNA repair protein RadC [Zunongwangia profunda SM-A87] gi|294984253|gb|ADF54718.1| DNA repair protein RadC [Zunongwangia profunda SM-A87] Length = 147 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ NI+ S G I+ V IR + L+ +T+II+ HNHPSG S D Sbjct: 50 MLLNNSNIVKGICQISTGGINATLVDIRIMFALILKSLSTAIIVCHNHPSGKLQASQVDK 109 Query: 61 NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97 +T I + L+I + DH+II + ++SF I+ Sbjct: 110 KLTSKIQKACDFLDIKLLDHLIINSEGNYLSFADEGIL 147 >gi|291529737|emb|CBK95323.1| DNA repair proteins [Eubacterium rectale M104/1] Length = 158 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 41/95 (43%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L I G+ + REI R A S I+ HNHPS + PS DI Sbjct: 61 LTTKCKPIGVFDVFHGSAQTCLMNTREIFVRLCICGAVSFIVAHNHPSDDCTPSADDIRS 120 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + + N ++I + DHIII SFK ++ Sbjct: 121 TSKLASAANMMSIPLLDHIIISPKEMFSFKEHNML 155 >gi|291166284|gb|EFE28330.1| DNA repair protein RadC [Filifactor alocis ATCC 35896] Length = 176 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 28/77 (36%), Positives = 40/77 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD N +I E S GTI+ V+ REI + + A +IIL HNHPSG+ PS D Sbjct: 97 VFLDTKNRVIDYEEVSLGTINSSIVHPREIFRGAVINKANAIILCHNHPSGDLTPSGEDK 156 Query: 61 NMTQNIITTLNPLNIIV 77 +T + + + Sbjct: 157 TITLRLKEAGKLMGLRF 173 >gi|303327272|ref|ZP_07357714.1| DNA repair protein RadC [Desulfovibrio sp. 3_1_syn3] gi|302863260|gb|EFL86192.1| DNA repair protein RadC [Desulfovibrio sp. 3_1_syn3] Length = 230 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 48/87 (55%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D N LIA E RG I+ VPV R++++ L A+ IIL HNHP G+P PS D+ +T Sbjct: 137 DAQNGLIAWERLRRGGINAVPVQPRDVLETALTHKASGIILAHNHPGGSPGPSKPDLMLT 196 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVS 90 + + + + DH+I+ + S Sbjct: 197 EELQRLAPRMGLRFLDHVIVTEGICYS 223 >gi|225630427|ref|YP_002727218.1| DNA repair protein RadC [Wolbachia sp. wRi] gi|225592408|gb|ACN95427.1| DNA repair protein RadC [Wolbachia sp. wRi] Length = 219 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD+ LI + +Q GTID VP+Y+REI+++ L + A+SI + HNHPSG+ PS D Sbjct: 123 IYLDRSGHLIYEYIQDCGTIDRVPLYVREIIKQGLLIDASSIAISHNHPSGDTEPSKEDE 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + T + T + + + DHII+ + + SF ++ Sbjct: 183 DNTLTLAATCENVGMKLIDHIIVTQKSHFSFYDSGLL 219 >gi|33592363|ref|NP_880007.1| DNA repair protein RadC [Bordetella pertussis Tohama I] gi|39931828|sp|Q7VYS4|Y1235_BORPE RecName: Full=UPF0758 protein BP1235 gi|33572008|emb|CAE41531.1| DNA repair protein [Bordetella pertussis Tohama I] Length = 225 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD LI +RGT+ +Y REIV+ L A ++IL HNHP G S ADI Sbjct: 129 LYLDARLKLIICAEVARGTLTQAQIYPREIVREALRHHAAALILTHNHPGGTAAASAADI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ I L +++ + DH+I+ A VS + Sbjct: 189 AMTRQIRQALALIDVRLIDHVIVAGAATVSMAAQGHL 225 >gi|153006774|ref|YP_001381099.1| DNA repair protein RadC [Anaeromyxobacter sp. Fw109-5] gi|152030347|gb|ABS28115.1| DNA repair protein RadC [Anaeromyxobacter sp. Fw109-5] Length = 222 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 1/96 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS-GNPNPSDAD 59 + LD LI + G++ PV R+ ++ + + A ++ VHNHPS G+P+PS D Sbjct: 123 VLLDVRGRLIKTVKIAEGSLTQCPVSPRDALREPVRIGAHGVVFVHNHPSSGDPSPSADD 182 Query: 60 INMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 ++T + + + ++ DH+I+ + SF Sbjct: 183 ADLTDRLRAAADLVGVLARDHVIVAASGYYSFVEAG 218 >gi|260593482|ref|ZP_05858940.1| DNA repair protein RadC [Prevotella veroralis F0319] gi|260534598|gb|EEX17215.1| DNA repair protein RadC [Prevotella veroralis F0319] Length = 228 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L + ++ LI + S G + P+ IR +++ L + T + HNHPSGN +PS D Sbjct: 132 LMMKQNFRLIEAKRISIGGLTMAPIDIRLMMKEALMKNTTILAFCHNHPSGNTSPSHEDD 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L+I DH+++ + S++ + Sbjct: 192 LLTTRIRKACELLSIHFADHVVLTDGNYYSYREEGRL 228 >gi|60681272|ref|YP_211416.1| putative DNA repair protein [Bacteroides fragilis NCTC 9343] gi|60492706|emb|CAH07479.1| putative DNA repair protein [Bacteroides fragilis NCTC 9343] Length = 147 Score = 99.7 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ L+ SR ++ V IR ++Q L A+ IIL HNHPSG+ S D Sbjct: 51 MYLNGAGRLLGVSCVSRSGMNSTVVDIRIVLQTALVSHASGIILSHNHPSGSTVASTPDN 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + + I + DHII+ D ++S+ ++ Sbjct: 111 NLTSQLKKGCEAIGIQLLDHIILTGDTYLSYMDEGML 147 >gi|323343922|ref|ZP_08084149.1| DNA repair protein RadC [Prevotella oralis ATCC 33269] gi|323095741|gb|EFZ38315.1| DNA repair protein RadC [Prevotella oralis ATCC 33269] Length = 242 Score = 99.4 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L ++++ LI S G I V +R I++ + +AT + L HNHPS N S D Sbjct: 146 LLMNQNFKLIKSMKLSHGGISETVVDVRVIIREAVLANATVLALCHNHPSNNALSSAEDD 205 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ + + + I DH+II +F S++ + Sbjct: 206 RLTQRVKKACDIMRIYFLDHLIITDGSFYSYRERGRL 242 >gi|331085143|ref|ZP_08334229.1| hypothetical protein HMPREF0987_00532 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407926|gb|EGG87416.1| hypothetical protein HMPREF0987_00532 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 168 Score = 99.4 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 53/92 (57%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD + ++ EV + G ++ V +RE+ + + +A SII+ HNHPSG+ +PS +D+ Sbjct: 63 CLDGKSQPVSMEVVAVGMVNQCLVGMREVFKNAILSNAVSIIVFHNHPSGDSHPSSSDLE 122 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 +++ + + I V DHI++G D F S Sbjct: 123 ISKKLRQAGILIGIEVLDHIVLGDDEFHSIAN 154 >gi|260173537|ref|ZP_05759949.1| DNA repair protein [Bacteroides sp. D2] Length = 151 Score = 99.4 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ N ++ S G I V +R I+Q L +AT +IL HNHPSG+ PS D Sbjct: 54 VLLNQSNRVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 113 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 +T+ + + I + DH+I+ + + S+ + Sbjct: 114 ALTEKVKKAAELMEIHIADHVILSPEKEYYSYNDEGKL 151 >gi|222825167|dbj|BAH22324.1| DNA repair protein RadC [Wolbachia endosymbiont of Cadra cautella] Length = 219 Score = 99.4 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD+ LI + +Q GTID VP+Y+REI+++ L + A+SI + HNHPSG+ PS D Sbjct: 123 VYLDRSGHLIYEYIQDCGTIDRVPLYVREIIKQGLLIDASSIAISHNHPSGDTEPSKEDE 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + T + T + + + DHII+ + + SF ++ Sbjct: 183 DNTLTLAATCENVGMKLIDHIIVTQKSHFSFYDSGLL 219 >gi|71066389|ref|YP_265116.1| DNA repair protein RadC [Psychrobacter arcticus 273-4] gi|123748093|sp|Q4FQM6|Y1834_PSYA2 RecName: Full=UPF0758 protein Psyc_1834 gi|71039374|gb|AAZ19682.1| probable DNA repair protein RadC [Psychrobacter arcticus 273-4] Length = 227 Score = 99.4 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 50/96 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD LI E+ G I V I+ +++ L + + +I+ HNHP + PS AD Sbjct: 128 LCLDNALNLINFEILFTGGISSCSVCIKHVLRHALSHATSQLIIAHNHPHTDATPSTADN 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +T + + +++ + DH+I+G++ +S+ + Sbjct: 188 LLTYELKKACDLIDLSLIDHVIVGRNETLSYAENCL 223 >gi|325860385|ref|ZP_08173497.1| DNA repair protein RadC [Prevotella denticola CRIS 18C-A] gi|327312589|ref|YP_004328026.1| DNA repair protein RadC [Prevotella denticola F0289] gi|325482043|gb|EGC85064.1| DNA repair protein RadC [Prevotella denticola CRIS 18C-A] gi|326945677|gb|AEA21562.1| DNA repair protein RadC [Prevotella denticola F0289] Length = 232 Score = 99.4 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L + ++ LI + S G + PV IR +++ L + T + HNHPSG+ NPS D Sbjct: 136 LMMKQNFRLIEAKRISTGGLTMAPVDIRLMMKEALLKNTTILAFCHNHPSGSTNPSREDD 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I N L I DH+I+ ++ S++ + Sbjct: 196 KLTTSIQKACNLLCIHFADHVILADGSYFSYREEGKL 232 >gi|256840461|ref|ZP_05545969.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256737733|gb|EEU51059.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 147 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ L+ SR ++ V IR ++Q L A+ IIL HNHPSG+ S D Sbjct: 51 MYLNGAGRLLGVSCVSRSGMNSTVVDIRIVLQTALVSHASGIILSHNHPSGSTVASTPDN 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + + I + DHII+ D ++S+ ++ Sbjct: 111 NLTSQLKKGCEAIGIQLLDHIILTGDTYLSYMDEGML 147 >gi|154494083|ref|ZP_02033403.1| hypothetical protein PARMER_03428 [Parabacteroides merdae ATCC 43184] gi|154086343|gb|EDN85388.1| hypothetical protein PARMER_03428 [Parabacteroides merdae ATCC 43184] Length = 226 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 49/94 (52%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 ++ +++I S+G I +R I++ + A IIL HNHPSGNP PS D +T Sbjct: 133 NRSSLVIEKVKISQGGISETSADLRIILKAAINALAVGIILCHNHPSGNPRPSRQDDLLT 192 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 Q++ L I + DHI++ ++ S+ + Sbjct: 193 QHLRDAARLLEIQLLDHIVLADGSYYSYSDEGTL 226 >gi|227544227|ref|ZP_03974276.1| DNA repair protein RadC [Lactobacillus reuteri CF48-3A] gi|300908222|ref|ZP_07125688.1| DNA repair protein RadC [Lactobacillus reuteri SD2112] gi|227185798|gb|EEI65869.1| DNA repair protein RadC [Lactobacillus reuteri CF48-3A] gi|300894649|gb|EFK88005.1| DNA repair protein RadC [Lactobacillus reuteri SD2112] Length = 210 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 51/96 (53%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 D HN +I ++ G +Y +I Q L SA II++HNHP+G+ +PS D + Sbjct: 110 CTDIHNEIIDWKILFVGGGCECILYPDKIFQYALRCSAQGIIMIHNHPTGDIHPSKQDES 169 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + + + D +I+G+D + S++ ++ Sbjct: 170 FTRRLERGCEIIGLHLVDFMIVGRDTYHSWREASLV 205 >gi|330429692|gb|AEC21026.1| DNA repair protein radC-like protein [Pusillimonas sp. T7-7] Length = 83 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/81 (39%), Positives = 47/81 (58%) Query: 15 QSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLN 74 S GT+ VY REIV+ L L A +II+ HNHPSG P PS+AD+ +T+++ L ++ Sbjct: 1 MSHGTLTQASVYPREIVKTALRLDAAAIIMSHNHPSGIPKPSEADLALTRHLKHALTLVD 60 Query: 75 IIVHDHIIIGKDAFVSFKGLR 95 + + DHII+ S Sbjct: 61 VRLLDHIIVTGQNTTSLAERG 81 >gi|304311413|ref|YP_003811011.1| DNA repair protein similar to radC-family [gamma proteobacterium HdN1] gi|304313154|ref|YP_003812752.1| DNA repair protein similar to RadC-family [gamma proteobacterium HdN1] gi|301797146|emb|CBL45362.1| DNA repair protein similar to radC-family [gamma proteobacterium HdN1] gi|301798887|emb|CBL47123.1| DNA repair protein similar to RadC-family [gamma proteobacterium HdN1] Length = 166 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD + +I GT+D V+ R I+Q+ LE++A ++I HNHPSG PS +D Sbjct: 71 IYLDAGHCVIEMVKHFHGTVDSSHVHARPIMQKALEINAVAVIFCHNHPSGRAEPSASDK 130 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T ++IT L +++ V DH+++G + S GL ++ Sbjct: 131 AITNHLITVLKYVDVRVLDHLVVG-ETVASMAGLGMM 166 >gi|266619862|ref|ZP_06112797.1| DNA repair protein RadC [Clostridium hathewayi DSM 13479] gi|288868571|gb|EFD00870.1| DNA repair protein RadC [Clostridium hathewayi DSM 13479] Length = 215 Score = 99.0 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 54/96 (56%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +LD +I+ E + GT+D P + RE+++R L+L A ++L HNHP + S+ DI Sbjct: 95 YLDSGCGVISCEKVAEGTVDRSPFFTRELLKRVLQLDAVGVVLAHNHPGNSLKASEQDIA 154 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T + L L I V DHII+G D VS II Sbjct: 155 ITNQLRDALGALAIKVFDHIIVGADRAVSLYQEGII 190 >gi|315921807|ref|ZP_07918047.1| DNA repair protein [Bacteroides sp. D2] gi|313695682|gb|EFS32517.1| DNA repair protein [Bacteroides sp. D2] Length = 154 Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ N ++ S G I V +R I+Q L +AT +IL HNHPSG+ PS D Sbjct: 57 VLLNQSNRVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 116 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 +T+ + + I + DH+I+ + + S+ + Sbjct: 117 ALTEKVKKAAELMEIHIADHVILSPEKEYYSYNDEGKL 154 >gi|281420983|ref|ZP_06251982.1| DNA repair protein RadC [Prevotella copri DSM 18205] gi|281404901|gb|EFB35581.1| DNA repair protein RadC [Prevotella copri DSM 18205] Length = 229 Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L ++++ LI S+G I IR I++ + +AT I HNHPS NP PS AD Sbjct: 133 LMMNQNFKLIKASCISKGGITETATDIRLIIKEAVLNNATIIAFCHNHPSNNPQPSKADD 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +TQ I + + DH+II AF S+ + Sbjct: 193 VLTQKIAKACEIMRLFFMDHVIITDGAFYSYHDKGKL 229 >gi|281422132|ref|ZP_06253131.1| DNA repair protein RadC [Prevotella copri DSM 18205] gi|281403921|gb|EFB34601.1| DNA repair protein RadC [Prevotella copri DSM 18205] Length = 218 Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L ++++ LI S G I V +R I++ + +AT + + HNHPS +P+PS AD Sbjct: 120 LLMNQNFRLIKHVPMSHGGITETAVDVRRIMREAVLNNATILAIAHNHPSNSPHPSKADD 179 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+++ + + I DH+II + S+ + Sbjct: 180 MLTKSVKEACSIMRIFFMDHVIIADGCYFSYHDKGRL 216 >gi|257453116|ref|ZP_05618415.1| DNA primase TraC3 [Fusobacterium sp. 3_1_5R] gi|317059651|ref|ZP_07924136.1| DNA repair protein RadC [Fusobacterium sp. 3_1_5R] gi|313685327|gb|EFS22162.1| DNA repair protein RadC [Fusobacterium sp. 3_1_5R] Length = 1296 Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 54/94 (57%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 DK+N + E +GT++ PV ++ ++ L+ + I ++HNHPSG P PS DI +T Sbjct: 426 DKNNKITNYETLFKGTVNSAPVDLKVLIPYLLDENIKGIQILHNHPSGIPKPSRKDIELT 485 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++I + N + DH I+GK+ SF+ ++ Sbjct: 486 RDIESLCKKFNKELLDHTIVGKEDIFSFQREGML 519 >gi|148543746|ref|YP_001271116.1| DNA repair protein RadC [Lactobacillus reuteri DSM 20016] gi|184153152|ref|YP_001841493.1| putative DNA repair protein [Lactobacillus reuteri JCM 1112] gi|227363274|ref|ZP_03847406.1| DNA repair protein RadC [Lactobacillus reuteri MM2-3] gi|325682118|ref|ZP_08161636.1| DNA repair protein RadC [Lactobacillus reuteri MM4-1A] gi|148530780|gb|ABQ82779.1| DNA repair protein RadC [Lactobacillus reuteri DSM 20016] gi|183224496|dbj|BAG25013.1| putative DNA repair protein [Lactobacillus reuteri JCM 1112] gi|227071730|gb|EEI10021.1| DNA repair protein RadC [Lactobacillus reuteri MM2-3] gi|324978762|gb|EGC15711.1| DNA repair protein RadC [Lactobacillus reuteri MM4-1A] Length = 210 Score = 98.6 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 51/96 (53%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 D HN +I ++ G +Y +I Q L SA II++HNHP+G+ +PS D + Sbjct: 110 CTDIHNEIIDWKILFVGGGCECILYPDKIFQYALRCSAQGIIMIHNHPTGDIHPSKQDES 169 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + + + D +I+G+D + S++ ++ Sbjct: 170 FTRRLERGCEIIGLHLVDFMIVGRDTYHSWREASLV 205 >gi|194468308|ref|ZP_03074294.1| DNA repair protein RadC [Lactobacillus reuteri 100-23] gi|194453161|gb|EDX42059.1| DNA repair protein RadC [Lactobacillus reuteri 100-23] Length = 210 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 51/96 (53%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 D HN +I ++ G +Y +I Q L SA II++HNHP+G+ +PS D + Sbjct: 110 CTDIHNEIIDWKILFVGGGCECILYPDKIFQYALRCSAQGIIMIHNHPTGDIHPSKQDES 169 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + + + + D +I+G+D + S++ ++ Sbjct: 170 FTRRLERGCEIIGLHLVDFMIVGRDTYHSWREASLV 205 >gi|298484383|ref|ZP_07002542.1| DNA repair protein [Bacteroides sp. D22] gi|298269447|gb|EFI11049.1| DNA repair protein [Bacteroides sp. D22] gi|301165227|emb|CBW24798.1| putative DNA repair protein [Bacteroides fragilis 638R] Length = 147 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 52/97 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L+ L+ SR ++ V IR ++Q L A+ IIL HNHPSG+ S D Sbjct: 51 MYLNGAGRLLGVSCVSRSGMNSTVVDIRIVLQTALVSHASGIILSHNHPSGSTVASTPDN 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N+T + + I + DHII+ +DA++S+ ++ Sbjct: 111 NLTSQLKKGCEAIGIQLLDHIILTEDAYLSYMDEGML 147 >gi|210623724|ref|ZP_03294008.1| hypothetical protein CLOHIR_01959 [Clostridium hiranonis DSM 13275] gi|210153412|gb|EEA84418.1| hypothetical protein CLOHIR_01959 [Clostridium hiranonis DSM 13275] Length = 225 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 39/93 (41%), Positives = 57/93 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I D S GT++ V+ RE+ ++ ++ SA IIL+HNHPSGN PS+ DI Sbjct: 129 VLLNTKNEIITDIDVSHGTLNSSLVHPREVFKQAIKKSANKIILIHNHPSGNVEPSNEDI 188 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 ++T +I + I V DHIIIG + SFK Sbjct: 189 HITDRLIECGKIIGIEVIDHIIIGDGIYYSFKE 221 >gi|300957786|ref|ZP_07169970.1| DNA repair protein RadC domain protein [Escherichia coli MS 175-1] gi|300315513|gb|EFJ65297.1| DNA repair protein RadC domain protein [Escherichia coli MS 175-1] Length = 74 Score = 98.2 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 46/73 (63%) Query: 25 VYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIG 84 V+ RE+++R L +A +++L HNHPSG PS AD +T+ ++ L ++I V DH+I+G Sbjct: 2 VHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG 61 Query: 85 KDAFVSFKGLRII 97 + SF ++ Sbjct: 62 GNQVFSFAEHGLL 74 >gi|86606346|ref|YP_475109.1| DNA repair protein RadC [Synechococcus sp. JA-3-3Ab] gi|86554888|gb|ABC99846.1| DNA repair protein RadC [Synechococcus sp. JA-3-3Ab] Length = 243 Score = 97.8 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 52/94 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI ++ +RGT + RE + + A+ I++ HNHPSG+ +PS D+ Sbjct: 139 LHLDIKHRLIGQQIVTRGTATETLTHPRETFRSAIRQGASRILVAHNHPSGSLDPSPEDL 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ ++ L I V DH+I+G F+S + Sbjct: 199 ALTRQLLQAGQLLQIPVLDHLILGGGQFLSLRQH 232 >gi|300957303|ref|ZP_07169528.1| DNA repair protein RadC domain protein [Escherichia coli MS 175-1] gi|300315941|gb|EFJ65725.1| DNA repair protein RadC domain protein [Escherichia coli MS 175-1] Length = 74 Score = 97.8 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 45/73 (61%) Query: 25 VYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIG 84 V+ RE+++R L +A ++IL HNHPSG PS AD +T+ ++ L ++I V DH+I+G Sbjct: 2 VHPREVIKRALYHNAAAVILAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG 61 Query: 85 KDAFVSFKGLRII 97 SF ++ Sbjct: 62 GSQVFSFAEHGLL 74 >gi|58699615|ref|ZP_00374308.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila ananassae] gi|58533866|gb|EAL58172.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila ananassae] Length = 100 Score = 97.8 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD+ LI + +Q GTID VP+Y+REI+++ L + A+SI + HNHPSG+ PS D Sbjct: 4 IYLDRSGHLIYEYIQDCGTIDRVPLYVREIIKQGLLIDASSIAISHNHPSGDTEPSKEDE 63 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + T + T + + + DHII+ + + SF ++ Sbjct: 64 DNTLTLAATCENVGMKLIDHIIVTQKSHFSFYDSGLL 100 >gi|260173548|ref|ZP_05759960.1| DNA repair protein [Bacteroides sp. D2] Length = 151 Score = 97.8 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ N ++ S G I V +R I+Q L +AT +IL HNHPSG+ PS D Sbjct: 54 VLLNQSNRVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 113 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGL 94 +T+ + + I + DH+I+ ++ + S+ Sbjct: 114 TLTERVKKAAELMEIHIADHVILSPENEYYSYYDE 148 >gi|163752783|ref|ZP_02159907.1| DNA repair protein [Kordia algicida OT-1] gi|161326515|gb|EDP97840.1| DNA repair protein [Kordia algicida OT-1] Length = 206 Score = 97.8 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 49/91 (53%) Query: 7 NILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNI 66 N ++ E+ + G + V ++ + + A +ILVHNHPSGN PS D ++T + Sbjct: 49 NTILFVELIAIGAQNRVNANPPDVFRMGIYKLAVRVILVHNHPSGNLKPSAQDKDITDRL 108 Query: 67 ITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + +NI V DH+II + F SFK I+ Sbjct: 109 LKVGKLINIDVIDHLIITESGFTSFKDKGIM 139 >gi|149280713|ref|ZP_01886823.1| DNA repair protein [Pedobacter sp. BAL39] gi|149228537|gb|EDM33946.1| DNA repair protein [Pedobacter sp. BAL39] Length = 164 Score = 97.4 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + + ++++ + G I HV V + I + AT I+L HNHPSG+ PS D Sbjct: 55 VLFNCQSVVLGVMTVATGGITHVMVDPKLIFAAAVTSGATGILLAHNHPSGDLTPSIPDK 114 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ II I V DH+I+ + + SF +I Sbjct: 115 QLTKRIIKLAELHQITVLDHLIVNSEDYFSFVEANLI 151 >gi|295135838|ref|YP_003586514.1| DNA repair protein RadC [Zunongwangia profunda SM-A87] gi|294983853|gb|ADF54318.1| DNA repair protein RadC [Zunongwangia profunda SM-A87] Length = 149 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%) Query: 8 ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNII 67 + SRG I + V +R I L+ +T++IL HNHPSG PS+ D ++T+ I Sbjct: 59 RVKGIFEVSRGGITYTLVDLRLIFGVILKSLSTAVILCHNHPSGTLLPSNPDKDLTRKIK 118 Query: 68 TTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 +I V DH+I+ + SF ++ Sbjct: 119 NAAGLFDIKVLDHLILTPGGDYYSFADNGML 149 >gi|551992|gb|AAA26680.1| 25 kD protein (putative); putative [Staphylococcus aureus] Length = 82 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 43/82 (52%) Query: 16 SRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNI 75 +GT++ V+ REI + +A +II VHNHPSG+ PS DI T + L I Sbjct: 1 FKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDIITTMRLKECGLILGI 60 Query: 76 IVHDHIIIGKDAFVSFKGLRII 97 + DHIIIG + F S + Sbjct: 61 DLLDHIIIGDNRFTSLVEAGTL 82 >gi|325300758|ref|YP_004260674.1| DNA repair protein RadC [Bacteroides salanitronis DSM 18170] gi|324320311|gb|ADY38201.1| DNA repair protein RadC [Bacteroides salanitronis DSM 18170] Length = 146 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + ++ I S+GTI+ + +R + + +E AT +IL+HNHPSGN PS D Sbjct: 49 ILINSAGNTIGYAKISQGTINSTLIDVRLVAKYAIEALATGVILIHNHPSGNTRPSVDDS 108 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97 NM + L+ LNI + D III + + SF I Sbjct: 109 NMATRLKKALDLLNIRLLDSIIITDTENYYSFSDEGFI 146 >gi|303231365|ref|ZP_07318099.1| putative DNA repair protein RadC [Veillonella atypica ACS-049-V-Sch6] gi|302513961|gb|EFL55969.1| putative DNA repair protein RadC [Veillonella atypica ACS-049-V-Sch6] Length = 232 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 51/96 (53%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L N LI E S G + V R + ++ + +A +IIL+HNHPSG+ PSD DI Sbjct: 136 MLTSRNKLIHIETISNGGLTSSLVEQRAVFRKAIACNAAAIILIHNHPSGDSRPSDDDIR 195 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHI+IG F S + + Sbjct: 196 VTKLFVSAGQFMGIPVLDHIVIGDGEFTSLSEIGKL 231 >gi|218258236|ref|ZP_03474638.1| hypothetical protein PRABACTJOHN_00292 [Parabacteroides johnsonii DSM 18315] gi|218225579|gb|EEC98229.1| hypothetical protein PRABACTJOHN_00292 [Parabacteroides johnsonii DSM 18315] Length = 248 Score = 97.0 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 49/94 (52%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 ++ + +I S+G +R I++ + AT IIL HNHPSGN PS D ++T Sbjct: 155 NRSSFVIEKVKISQGGTSETSADLRIILKAAINALATGIILCHNHPSGNIRPSQQDDHLT 214 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 Q++ L++ + DHI++ ++ S+ + Sbjct: 215 QHLRDAARLLDMQLLDHIVLTDGSYYSYSDEGTL 248 >gi|205825358|dbj|BAG71449.1| DNA repair protein RadC [Staphylococcus aureus] Length = 148 Score = 97.0 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 51/96 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + ++ N + S G+I+ ++ REI + + +A SI+L HNHPSG+ PS DI Sbjct: 49 ICMNSKNEPTHIQTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDITPSPEDI 108 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 N+T+ ++ + I+ +DHII S + + Sbjct: 109 NVTKRLMLISEMMGILFYDHIIFSDSNTYSIRQHDL 144 >gi|315921816|ref|ZP_07918056.1| DNA repair protein [Bacteroides sp. D2] gi|313695691|gb|EFS32526.1| DNA repair protein [Bacteroides sp. D2] Length = 154 Score = 97.0 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ N ++ S G I V +R I+Q L +AT +IL HNHPSG+ PS D Sbjct: 57 VLLNQSNRVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 116 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGL 94 +T+ + + I + DH+I+ ++ + S+ Sbjct: 117 TLTERVKKAAELMEIHIADHVILSPENEYYSYYDE 151 >gi|167765535|ref|ZP_02437599.1| hypothetical protein CLOSS21_00029 [Clostridium sp. SS2/1] gi|317498487|ref|ZP_07956781.1| DNA repair protein RadC [Lachnospiraceae bacterium 5_1_63FAA] gi|167712720|gb|EDS23299.1| hypothetical protein CLOSS21_00029 [Clostridium sp. SS2/1] gi|316894180|gb|EFV16368.1| DNA repair protein RadC [Lachnospiraceae bacterium 5_1_63FAA] Length = 78 Score = 97.0 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 27/77 (35%), Positives = 42/77 (54%) Query: 21 DHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDH 80 + RE+ L A S++++HNHPSG+P PS DI T+ + L I + DH Sbjct: 2 NQTVASPRELFLEALRCEAVSVLMIHNHPSGDPTPSRQDILTTKRMKEAGEFLGIPLCDH 61 Query: 81 IIIGKDAFVSFKGLRII 97 IIIG ++SF+ ++ Sbjct: 62 IIIGDQTYLSFREEHMM 78 >gi|257080701|ref|ZP_05575062.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256988731|gb|EEU76033.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] Length = 99 Score = 96.7 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 40/74 (54%) Query: 23 VPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHII 82 + REI + ++ S+ I+L HNHPSGNP PS DI T+ + + I + DHII Sbjct: 22 SIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDIQFTKRMEECGEMMGIQLLDHII 81 Query: 83 IGKDAFVSFKGLRI 96 +G ++S + Sbjct: 82 VGDSGYISLREENF 95 >gi|303229339|ref|ZP_07316129.1| putative DNA repair protein RadC [Veillonella atypica ACS-134-V-Col7a] gi|302515875|gb|EFL57827.1| putative DNA repair protein RadC [Veillonella atypica ACS-134-V-Col7a] Length = 232 Score = 96.7 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 51/96 (53%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L N LI E S G + V R + ++ + +A +IIL+HNHPSG+ PSD DI Sbjct: 136 MLTSRNKLIHIETISNGGLTSSLVEQRAVFRKAIACNAAAIILIHNHPSGDSRPSDDDIR 195 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHI+IG F S + + Sbjct: 196 VTKLFVSAGQFMGIPVLDHIVIGDGEFTSLSEIGKL 231 >gi|86609443|ref|YP_478205.1| DNA repair protein RadC [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557985|gb|ABD02942.1| DNA repair protein RadC [Synechococcus sp. JA-2-3B'a(2-13)] Length = 239 Score = 96.7 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 54/94 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + L++ ++ +RGT + RE + ++ A+ I++ HNHPSG+ +PS D+ Sbjct: 135 LHLDVKHRLLSQQIVTRGTATETLSHPRETFRSAIKQGASRILVAHNHPSGSLDPSPEDL 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +T+ ++ L I V DH+I+G F+S + Sbjct: 195 ALTRQLLQAGQLLQIPVLDHLILGGGQFLSLRQR 228 >gi|315296398|gb|EFU55698.1| DNA repair protein RadC domain protein [Escherichia coli MS 16-3] Length = 72 Score = 96.7 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 45/72 (62%) Query: 26 YIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGK 85 + RE+++R L +A +++L HNHPSG PS AD +T+ ++ L ++I V DH+I+G Sbjct: 1 HPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALALVDIRVPDHLIVGG 60 Query: 86 DAFVSFKGLRII 97 + SF ++ Sbjct: 61 NQVFSFAEHGLL 72 >gi|325268666|ref|ZP_08135296.1| DNA repair protein RadC [Prevotella multiformis DSM 16608] gi|324989194|gb|EGC21147.1| DNA repair protein RadC [Prevotella multiformis DSM 16608] Length = 232 Score = 96.7 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 50/95 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L + ++ LI + S G + PV IR +++ L + T + HNHPSG+ NPS D Sbjct: 136 LMMKQNFRLIEAKRISIGGLTMAPVDIRLMMKEALLKNTTILAFCHNHPSGSTNPSREDD 195 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +T +I + L+I DH+I+ ++ S++ Sbjct: 196 KLTTSIQKACSVLHIHFADHVILADGSYFSYREEG 230 >gi|302345924|ref|YP_003814277.1| DNA repair protein RadC [Prevotella melaninogenica ATCC 25845] gi|302149303|gb|ADK95565.1| DNA repair protein RadC [Prevotella melaninogenica ATCC 25845] Length = 228 Score = 96.7 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L + ++ LI + S G + PV +R +++ L + T + HNHPSG+ NPS D Sbjct: 132 LMMKQNFRLIEAKRISVGGLTMAPVDLRLMMKEVLLKNTTVLAFCHNHPSGSTNPSRDDD 191 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I L+I DH+I+ + S++ + Sbjct: 192 ILTSHIHKACELLHIHFADHVILTDGGYFSYREEGKL 228 >gi|237723203|ref|ZP_04553684.1| DNA repair protein [Bacteroides sp. 2_2_4] gi|229447725|gb|EEO53516.1| DNA repair protein [Bacteroides sp. 2_2_4] Length = 154 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ N ++ S G I V +R I+Q L +AT +IL HNHPSG+ PS D Sbjct: 57 VLLNQSNRVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 116 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 +T+ + + I + DHII+ + + S+ + Sbjct: 117 TLTEKVRKVAELMEIHIADHIILSPEKEYYSYHDEGKL 154 >gi|288803968|ref|ZP_06409390.1| DNA repair protein RadC [Prevotella melaninogenica D18] gi|288333538|gb|EFC71991.1| DNA repair protein RadC [Prevotella melaninogenica D18] Length = 179 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L + ++ LI + S G + PV IR +++ L + T + HNHPSG+ NPS D Sbjct: 83 LMMKQNFRLIEAKRISVGGLTMAPVDIRLMMKEVLLKNTTVLAFCHNHPSGSTNPSRDDD 142 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T +I L+I DH+I+ + S++ + Sbjct: 143 ILTSHIHKACELLHIHFADHVILTDGGYFSYREEGKL 179 >gi|291544071|emb|CBL17180.1| DNA repair protein radc [Ruminococcus sp. 18P13] Length = 233 Score = 96.3 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 49/94 (52%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD L++ V S G VPV++R +V+ L+ + ++L HNHP+G PS DI Sbjct: 134 CLDDRLRLMSCGVVSEGAPSSVPVHMRRLVEYALQQKSELVVLAHNHPNGTAMPSPEDIA 193 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 TQ I L + I + DHII+ + VS K Sbjct: 194 ATQKIFNVLKSVGIRLVDHIIVAGEQAVSLKEYG 227 >gi|312900402|ref|ZP_07759712.1| DNA repair protein RadC domain protein [Enterococcus faecalis TX0470] gi|311292492|gb|EFQ71048.1| DNA repair protein RadC domain protein [Enterococcus faecalis TX0470] Length = 83 Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 40/74 (54%) Query: 23 VPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHII 82 + REI + ++ S+ I+L HNHPSGNP PS DI T+ + + I + DHII Sbjct: 6 SIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDIQFTKRMEECGEMMGIQLLDHII 65 Query: 83 IGKDAFVSFKGLRI 96 +G ++S + Sbjct: 66 VGDSGYISLREENF 79 >gi|124484938|ref|YP_001029554.1| hypothetical protein Mlab_0110 [Methanocorpusculum labreanum Z] gi|124362479|gb|ABN06287.1| DNA repair protein RadC [Methanocorpusculum labreanum Z] Length = 247 Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L + ++ + ++G ++ ++ RE+ + A ++IL+HNHPSGN +PS D+ + Sbjct: 154 LSGAHEVLKVRLITKGLVNESQIHPREVFAGAILDRAAAMILIHNHPSGNLHPSKQDLKI 213 Query: 63 TQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGL 94 T+ + L I + DH+IIG D F S Sbjct: 214 TKEMQAAGELLGIKLLDHLIIGPTDGFYSIVDE 246 >gi|260437636|ref|ZP_05791452.1| DNA repair protein RadC [Butyrivibrio crossotus DSM 2876] gi|292809989|gb|EFF69194.1| DNA repair protein RadC [Butyrivibrio crossotus DSM 2876] Length = 717 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%) Query: 8 ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNII 67 I + S G +D + REI++ + +A +IILVHNHPSG PS DI +T + Sbjct: 80 RPININIASIGALDQSIAHPREILKSTILSNAAAIILVHNHPSGRLAPSVEDIGLTDRMN 139 Query: 68 TTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 + + + + DHII+G + F SF+ + Sbjct: 140 KICDLIGVKLVDHIIVGPGNEFYSFQEKNQM 170 >gi|307268851|ref|ZP_07550218.1| DNA repair protein RadC domain protein [Enterococcus faecalis TX4248] gi|306514855|gb|EFM83403.1| DNA repair protein RadC domain protein [Enterococcus faecalis TX4248] Length = 81 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 41/74 (55%) Query: 23 VPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHII 82 + REI + ++ S+ I+L HNHPSGNP PS DI T+ + + I + DHII Sbjct: 4 SIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDIQFTKRMEECGEMMGIQLLDHII 63 Query: 83 IGKDAFVSFKGLRI 96 +G A++S + Sbjct: 64 VGDSAYISLREENF 77 >gi|227539169|ref|ZP_03969218.1| DNA repair protein [Sphingobacterium spiritivorum ATCC 33300] gi|227240851|gb|EEI90866.1| DNA repair protein [Sphingobacterium spiritivorum ATCC 33300] Length = 162 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 48/97 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL++ N ++ + G V + +V + A ++I+ HNHPSGN PS +D Sbjct: 54 LFLNQANNVLCWRLIGTGNGKSCIVDNKLLVAIACKTLAQNVIVAHNHPSGNLKPSKSDK 113 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T I L + + DH+II + + SF +I Sbjct: 114 QLTNGIQEILYMPDTKLLDHLIISHNGYFSFVDNDMI 150 >gi|313892501|ref|ZP_07826090.1| DNA repair protein RadC family protein [Dialister microaerophilus UPII 345-E] gi|313119080|gb|EFR42283.1| DNA repair protein RadC family protein [Dialister microaerophilus UPII 345-E] Length = 151 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 1/96 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD +I +RG I I+ I+QR L +ATSIIL+HNHPSG+ PS D++ Sbjct: 56 LDIKLNVIGIFEVARGDISQCITPIKSILQRALLTNATSIILIHNHPSGDTTPSSHDVHT 115 Query: 63 TQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97 T+ I L+I + DH++I K+ + S K I Sbjct: 116 TRKIDDACRLLDINLQDHLVIYNKNTYTSLKEKGYI 151 >gi|299148786|ref|ZP_07041848.1| DNA repair protein RadC [Bacteroides sp. 3_1_23] gi|298513547|gb|EFI37434.1| DNA repair protein RadC [Bacteroides sp. 3_1_23] Length = 154 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L++ N ++ S G I V +R I+Q L +AT +IL HNHPSG+ PS D Sbjct: 57 VLLNQSNKVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 116 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 +T+ + + I + DH+I+ + + S+ + Sbjct: 117 ALTEKVRKVAELMEIHIADHVILSPEKEYYSYYDEGKL 154 >gi|229829061|ref|ZP_04455130.1| hypothetical protein GCWU000342_01146 [Shuttleworthia satelles DSM 14600] gi|229792224|gb|EEP28338.1| hypothetical protein GCWU000342_01146 [Shuttleworthia satelles DSM 14600] Length = 241 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 51/96 (53%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 + + + L+ + V S G+ D IR+I L A+ ++L+HNHPSG+P PS AD Sbjct: 146 YFNVRDELVFESVISLGSSDRTDFPIRKIFSLALTHQASQLVLLHNHPSGDPTPSQADYL 205 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 TQ L I + DHIIIG + SF+ +I Sbjct: 206 ATQEAKMAGQYLEIALRDHIIIGDHQYYSFRQGELI 241 >gi|315288691|gb|EFU48089.1| DNA repair protein RadC domain protein [Escherichia coli MS 110-3] gi|315291428|gb|EFU50788.1| DNA repair protein RadC domain protein [Escherichia coli MS 153-1] Length = 72 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 44/72 (61%) Query: 26 YIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGK 85 + RE+++R L +A +++L HNHPSG PS AD +T+ ++ L ++I V DH+I+G Sbjct: 1 HPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGG 60 Query: 86 DAFVSFKGLRII 97 SF ++ Sbjct: 61 SQVFSFAEHGLL 72 >gi|42526485|ref|NP_971583.1| DNA repair protein RadC [Treponema denticola ATCC 35405] gi|41816678|gb|AAS11464.1| DNA repair protein RadC [Treponema denticola ATCC 35405] Length = 225 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 1/94 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +IA V S GTI+ V+ RE+ L+ A +II HNHPSGN PS D+ + Sbjct: 127 LNGANEIIATRVVSVGTINRTIVHPREVYSDPLKDRAAAIIAAHNHPSGNLEPSSEDMEL 186 Query: 63 TQNIITTLNPLNIIVHDHII-IGKDAFVSFKGLR 95 T+ I L I + DHII + F SF Sbjct: 187 TKRIYEAGKILGIKLLDHIILVPNGNFFSFVQSG 220 >gi|313897956|ref|ZP_07831496.1| DNA repair protein RadC family protein [Clostridium sp. HGF2] gi|312957228|gb|EFR38856.1| DNA repair protein RadC family protein [Clostridium sp. HGF2] Length = 190 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 6/100 (6%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N I V + G++DH + I+ + + L + +I+ HNHPSG PS DI Sbjct: 57 LNTKNQPINMSVVAVGSLDHASIDIKSVFKTALLSNTAKMIVFHNHPSGCNTPSLEDIRF 116 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAF------VSFKGLRI 96 T + T N + + + DHII+ KD SF + Sbjct: 117 TDLLYTASNLMGLQLLDHIIVAKDCMSNELKLFSFNEHHL 156 >gi|254409756|ref|ZP_05023537.1| DNA repair protein RadC [Microcoleus chthonoplastes PCC 7420] gi|196183753|gb|EDX78736.1| DNA repair protein RadC [Microcoleus chthonoplastes PCC 7420] Length = 243 Score = 95.5 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 47/91 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD N L+ ++ S GT REI+Q L AT I+ H+HP+G+ PS+ DI Sbjct: 139 LLLDVKNHLLGIKLISVGTATETLACPREILQAVLRHGATRFIVGHSHPTGSVEPSEKDI 198 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91 +T+ ++ + + DH+I+G S Sbjct: 199 YLTKQLLQGALLIETPLVDHLILGNGNHRSL 229 >gi|282850526|ref|ZP_06259905.1| putative DNA repair protein RadC [Veillonella parvula ATCC 17745] gi|282580019|gb|EFB85423.1| putative DNA repair protein RadC [Veillonella parvula ATCC 17745] Length = 232 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 52/96 (54%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L N LI E S G + V R + ++ + +A +IIL+HNHPSG+ PSD DI Sbjct: 136 MLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDSRPSDEDIR 195 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHI+IG + F S + + Sbjct: 196 LTKMFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKL 231 >gi|255532045|ref|YP_003092417.1| DNA repair protein RadC [Pedobacter heparinus DSM 2366] gi|255345029|gb|ACU04355.1| DNA repair protein RadC [Pedobacter heparinus DSM 2366] Length = 152 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 46/97 (47%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L + N ++ S I + I L+ +A+ IIL HNHPSG P +I Sbjct: 56 MLLSRSNRVLGIVDISTDGISKTVADPKVIFGIALKAAASGIILCHNHPSGALEPGSDNI 115 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + + + L I + D++II K++F S+ ++ Sbjct: 116 KVAEKLCWGAKILEIEIVDYLIISKNSFYSYSDEGLL 152 >gi|160934210|ref|ZP_02081597.1| hypothetical protein CLOLEP_03081 [Clostridium leptum DSM 753] gi|156866883|gb|EDO60255.1| hypothetical protein CLOLEP_03081 [Clostridium leptum DSM 753] Length = 251 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 44/92 (47%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD ++ V + GT + VY+R IV AT IL HNHPSG PS D+ Sbjct: 129 LLDGKGKVLYCGVVTEGTANSCDVYLRRIVGLAASYDATQAILAHNHPSGFALPSRTDLQ 188 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 T + L +N+ + DH+I+ +VS Sbjct: 189 TTVRVKEALALVNVTLIDHMIVADGDYVSMAQ 220 >gi|149278501|ref|ZP_01884638.1| DNA repair protein [Pedobacter sp. BAL39] gi|149230871|gb|EDM36253.1| DNA repair protein [Pedobacter sp. BAL39] Length = 168 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ I++ + G I V V IR I+ + A+ I+L HNHPS N PS ADI Sbjct: 55 ILLNTSGIVLGLLPVASGGIGGVLVDIRIILVAAINSGASGIVLAHNHPSMNLAPSKADI 114 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T I LNI + DH+II D ++SF +++ Sbjct: 115 DITNQIKQGAALLNIKLIDHLIISNDGYLSFADQQML 151 >gi|170016727|ref|YP_001727646.1| DNA repair protein [Leuconostoc citreum KM20] gi|169803584|gb|ACA82202.1| DNA repair protein [Leuconostoc citreum KM20] Length = 203 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 46/93 (49%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD +I E G++ V REI QR L +A +++HNHPSGN PSD DI Sbjct: 104 LLDAQLNVIGWETVFIGSLTSVQASPREIFQRVLIANALGFMIIHNHPSGNVMPSDTDIA 163 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 +Q + + + + + D ++ D++ S Sbjct: 164 FSQRLKQLGDQMAVPMFDSFVVTYDSYWSLSEN 196 >gi|294792153|ref|ZP_06757301.1| DNA repair protein RadC [Veillonella sp. 6_1_27] gi|294457383|gb|EFG25745.1| DNA repair protein RadC [Veillonella sp. 6_1_27] Length = 232 Score = 95.1 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 52/96 (54%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L N LI E S G + V R + ++ + +A +IIL+HNHPSG+ PSD DI Sbjct: 136 MLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDSRPSDEDIR 195 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHI+IG + F S + + Sbjct: 196 LTKMFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKL 231 >gi|237742746|ref|ZP_04573227.1| predicted protein [Fusobacterium sp. 4_1_13] gi|229430394|gb|EEO40606.1| predicted protein [Fusobacterium sp. 4_1_13] Length = 553 Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 34/94 (36%), Positives = 49/94 (52%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 DK+ +I+ E RG +D V I+ ++ + L+ T I + HNHPSGN NPS ADI +T Sbjct: 230 DKNYNVISCESIFRGGLDRSTVDIKTLIPKILDKRVTGISVSHNHPSGNSNPSRADIELT 289 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 I N + DH ++ K SF +I Sbjct: 290 NAIEKMCKKFNKNLLDHYVVSKSEVFSFLNKGLI 323 >gi|269798288|ref|YP_003312188.1| DNA repair protein RadC [Veillonella parvula DSM 2008] gi|294794018|ref|ZP_06759155.1| DNA repair protein RadC [Veillonella sp. 3_1_44] gi|269094917|gb|ACZ24908.1| DNA repair protein RadC [Veillonella parvula DSM 2008] gi|294455588|gb|EFG23960.1| DNA repair protein RadC [Veillonella sp. 3_1_44] Length = 232 Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 52/96 (54%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L N LI E S G + V R + ++ + +A +IIL+HNHPSG+ PSD DI Sbjct: 136 MLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDSRPSDEDIR 195 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHI+IG + F S + + Sbjct: 196 LTKMFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKL 231 >gi|238018938|ref|ZP_04599364.1| hypothetical protein VEIDISOL_00798 [Veillonella dispar ATCC 17748] gi|237864422|gb|EEP65712.1| hypothetical protein VEIDISOL_00798 [Veillonella dispar ATCC 17748] Length = 232 Score = 94.7 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 52/96 (54%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L N LI E S G + V R + ++ + +A +IIL+HNHPSG+ PSD DI Sbjct: 136 MLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDSRPSDEDIR 195 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHI+IG + F S + + Sbjct: 196 LTKLFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKL 231 >gi|15893201|ref|NP_360915.1| putative DNA repair protein (RadC) [Rickettsia conorii str. Malish 7] gi|15620416|gb|AAL03816.1| DNA repair protein (RadC)-like protein [Rickettsia conorii str. Malish 7] Length = 122 Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 46/78 (58%), Positives = 58/78 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+K NILIADEV S+GTID VY REI++R L A+S+ILVH+HPSG+P PS A+I Sbjct: 36 LFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASSLILVHHHPSGSPEPSKANI 95 Query: 61 NMTQNIITTLNPLNIIVH 78 +MT I+ +NIIV Sbjct: 96 HMTNKIVEKCQTINIIVL 113 >gi|169826083|ref|YP_001696241.1| DNA repair protein [Lysinibacillus sphaericus C3-41] gi|168990571|gb|ACA38111.1| DNA repair protein [Lysinibacillus sphaericus C3-41] Length = 83 Score = 94.7 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 47/83 (56%) Query: 15 QSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLN 74 G ++ V+ RE+++ + ++ SII+ HNHPS N PS DI +T+ +I + Sbjct: 1 MHIGNLNASIVHPREVLKSAILSNSASIIVAHNHPSNNCEPSPEDIEVTKRLIKAAEIIG 60 Query: 75 IIVHDHIIIGKDAFVSFKGLRII 97 I + DH+I+ D+F S K L I Sbjct: 61 ITLMDHLILSTDSFKSLKELGYI 83 >gi|212702189|ref|ZP_03310317.1| hypothetical protein DESPIG_00200 [Desulfovibrio piger ATCC 29098] gi|212674394|gb|EEB34877.1| hypothetical protein DESPIG_00200 [Desulfovibrio piger ATCC 29098] Length = 136 Score = 94.3 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 28/87 (32%), Positives = 45/87 (51%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 + N L+A E +G ++ VP+ R++++ L A+ IILVHNHP G PS DI T Sbjct: 43 NAGNRLMAWERLRQGNVESVPLLPRDVLEPALRYKASGIILVHNHPGGQTRPSQPDIIFT 102 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVS 90 + + + DH+I+ + S Sbjct: 103 NTVRELAVNMGLRFLDHVIVTDNGCYS 129 >gi|313893130|ref|ZP_07826707.1| DNA repair protein RadC [Veillonella sp. oral taxon 158 str. F0412] gi|313442483|gb|EFR60898.1| DNA repair protein RadC [Veillonella sp. oral taxon 158 str. F0412] Length = 279 Score = 94.3 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 52/96 (54%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 L N LI E S G + V R + ++ + +A +IIL+HNHPSG+ PSD DI Sbjct: 183 MLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDSRPSDEDIR 242 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ + I V DHI+IG + F S + + Sbjct: 243 LTKLFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKL 278 >gi|325473429|gb|EGC76624.1| DNA repair protein RadC [Treponema denticola F0402] Length = 225 Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 1/94 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N +IA V S GTI+ V+ RE+ L+ A +II HNHPSGN PS D+ + Sbjct: 127 LNGANEIIATRVVSVGTINRTIVHPREVYSDPLKDRAAAIIAAHNHPSGNLEPSSEDMEL 186 Query: 63 TQNIITTLNPLNIIVHDHII-IGKDAFVSFKGLR 95 T+ I L + + DHII + F SF Sbjct: 187 TRRIYEAGKILGVKLLDHIILVPNGNFFSFVQSG 220 >gi|167771605|ref|ZP_02443658.1| hypothetical protein ANACOL_02977 [Anaerotruncus colihominis DSM 17241] gi|167666245|gb|EDS10375.1| hypothetical protein ANACOL_02977 [Anaerotruncus colihominis DSM 17241] Length = 230 Score = 94.3 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L L+ L + + GTID P+Y R I++ + A S+IL HNHP G PS+AD+ Sbjct: 128 LCLNNKGGLTYGDFIAEGTIDSAPMYSRTILEAAMRSRAVSVILAHNHPHGLAVPSNADL 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+++ L I + DH I ++S + I Sbjct: 188 AATESVCHALAAAKIRLLDHFIFAGQDYISLRDSGFI 224 >gi|229135279|ref|ZP_04264075.1| DNA repair protein radC [Bacillus cereus BDRD-ST196] gi|228648204|gb|EEL04243.1| DNA repair protein radC [Bacillus cereus BDRD-ST196] Length = 73 Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 31/73 (42%), Positives = 43/73 (58%) Query: 25 VYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIG 84 ++ RE+ + +A SII +HNHPSG+P PS DI +T+ ++ + I V DHIIIG Sbjct: 1 MHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDIEVTKRLVECGRIIGIEVLDHIIIG 60 Query: 85 KDAFVSFKGLRII 97 FVS K I Sbjct: 61 DHKFVSLKEKGHI 73 >gi|229827154|ref|ZP_04453223.1| hypothetical protein GCWU000182_02539 [Abiotrophia defectiva ATCC 49176] gi|229788772|gb|EEP24886.1| hypothetical protein GCWU000182_02539 [Abiotrophia defectiva ATCC 49176] Length = 314 Score = 94.0 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L + I + S GT+D REI++ + +A +++L HNHPSGN NPS D + Sbjct: 66 LRTNGQPINMNIVSIGTLDSSLTNPREILKSMVLSNAFAVMLFHNHPSGNLNPSREDFII 125 Query: 63 TQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGL 94 T + N + I + DHIIIG D F SF Sbjct: 126 TNKMNDICNLIGIKLWDHIIIGPGDEFYSFHAE 158 >gi|157829113|ref|YP_001495355.1| hypothetical protein A1G_07030 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933837|ref|YP_001650626.1| DNA repair protein [Rickettsia rickettsii str. Iowa] gi|157801594|gb|ABV76847.1| hypothetical protein A1G_07030 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908924|gb|ABY73220.1| DNA repair protein [Rickettsia rickettsii str. Iowa] Length = 122 Score = 93.6 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 46/78 (58%), Positives = 58/78 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+K NILIADEV S+GTID VY REI++R L A+S+ILVH+HPSG+P PS +I Sbjct: 36 LFLNKKNILIADEVLSQGTIDQATVYPREIIKRALFNEASSLILVHHHPSGSPEPSKTNI 95 Query: 61 NMTQNIITTLNPLNIIVH 78 +MT I+ T +NIIV Sbjct: 96 HMTNKIVETCQTVNIIVL 113 >gi|75759952|ref|ZP_00740021.1| DNA repair protein radC [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74492549|gb|EAO55696.1| DNA repair protein radC [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 205 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 41/72 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+ N ++ + G+++ V+ RE+ + +A SII +HNHPSG+P PS DI Sbjct: 129 LYLNTKNQVLHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188 Query: 61 NMTQNIITTLNP 72 +T+ ++ Sbjct: 189 EVTKRLVECGQI 200 >gi|317132479|ref|YP_004091793.1| DNA repair protein RadC [Ethanoligenens harbinense YUAN-3] gi|315470458|gb|ADU27062.1| DNA repair protein RadC [Ethanoligenens harbinense YUAN-3] Length = 242 Score = 92.8 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 49/92 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + +D ++ G+++ V +R IV+ + +AT +IL HNHP G PS+ D+ Sbjct: 133 MCIDGKGKVLFCGQVFEGSVNAASVSVRRIVEIVVRYAATDVILAHNHPGGLAIPSEEDV 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 ++T + L ++I + DH+II +VS Sbjct: 193 HVTAQVADALRTVDIRLLDHLIIAGKDWVSLA 224 >gi|309389493|gb|ADO77373.1| DNA replication and repair protein RadC [Halanaerobium praevalens DSM 2228] Length = 231 Score = 92.0 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 59/96 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD N +I+ SRG + V+ RE+ + + S+ +IILVHNHPSG+P PS D+ Sbjct: 135 ILLDVKNKVISVPEISRGGLSSSIVHPREVFKEAIRRSSAAIILVHNHPSGDPTPSADDL 194 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++T+ ++ T + I + DHIII D ++SFK + Sbjct: 195 SITKKLVKTGKIIGIEIIDHIIIAGDKYLSFKEKGL 230 >gi|34581128|ref|ZP_00142608.1| hypothetical DNA repair protein (RadC) [Rickettsia sibirica 246] gi|28262513|gb|EAA26017.1| hypothetical DNA repair protein (RadC) [Rickettsia sibirica 246] Length = 122 Score = 91.7 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 46/78 (58%), Positives = 58/78 (74%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFL+K NILIADEV S+ TID VY REI++R L A+S+ILVH+HPSG+P PS A+I Sbjct: 36 LFLNKKNILIADEVLSQETIDQAAVYPREIIKRALFNEASSLILVHHHPSGSPEPSKANI 95 Query: 61 NMTQNIITTLNPLNIIVH 78 +MT I+ T +NIIV Sbjct: 96 HMTNKIVETCQTVNIIVL 113 >gi|313113935|ref|ZP_07799492.1| DNA repair protein RadC [Faecalibacterium cf. prausnitzii KLE1255] gi|310623730|gb|EFQ07128.1| DNA repair protein RadC [Faecalibacterium cf. prausnitzii KLE1255] Length = 247 Score = 91.7 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 46/95 (48%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + A GT D V + I+++V ++ +++L HNHP+G PS D+ Sbjct: 140 LDSRKRVRAAVWLREGTTDRVSLDIKDVVSAAIKGGTDTVVLSHNHPNGAALPSMEDLEA 199 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T NI L +NI + DH I+ + S + + Sbjct: 200 TGNIARALGLVNIHLLDHFILTDTEYFSMRDANRL 234 >gi|169823539|ref|YP_001691042.1| DNA repair protein [Finegoldia magna ATCC 29328] gi|167832159|dbj|BAG09074.1| DNA repair protein [Finegoldia magna ATCC 29328] Length = 102 Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 4/95 (4%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 D LI ++ S GTI+ + RE+ ++ + A +++ HNHPSG+ PS DI Sbjct: 1 MFDSKLKLIGIDLISVGTINQSLAHPREVFRKAVISGAAFVMIAHNHPSGDTTPSAEDIK 60 Query: 62 MTQNIITTLNPLNIIVHDHIIIG----KDAFVSFK 92 + +N+ LNI + D I+ +++ +S + Sbjct: 61 VYRNLSECSEILNIKLLDSFIVSLKPEQESVLSMR 95 >gi|262193472|ref|YP_003264681.1| DNA repair protein RadC [Haliangium ochraceum DSM 14365] gi|262076819|gb|ACY12788.1| DNA repair protein RadC [Haliangium ochraceum DSM 14365] Length = 226 Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 50/88 (56%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD N++I + +RG + V V+ RE+ + + A + ++ HNHPSG+P PS DI + Sbjct: 131 LDPRNVIIEEIEVARGCLTGVDVHPREVFRPLIRRGAAAAVVAHNHPSGDPAPSAEDIAL 190 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVS 90 T+ + + L I + DH+++G S Sbjct: 191 TRRLCEAGDLLGIPLLDHLVLGACNCAS 218 >gi|218458578|ref|ZP_03498669.1| DNA repair protein RadC [Rhizobium etli Kim 5] Length = 261 Score = 91.3 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 49/63 (77%), Positives = 56/63 (88%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI Sbjct: 199 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 258 Query: 61 NMT 63 +MT Sbjct: 259 DMT 261 >gi|126463593|ref|YP_001044707.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17029] gi|126105257|gb|ABN77935.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17029] Length = 223 Score = 90.5 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 44/66 (66%), Positives = 57/66 (86%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PSD D+ Sbjct: 158 LYLDRKNVLIADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSDQDV 217 Query: 61 NMTQNI 66 MT I Sbjct: 218 AMTAQI 223 >gi|237743672|ref|ZP_04574153.1| predicted protein [Fusobacterium sp. 7_1] gi|229432703|gb|EEO42915.1| predicted protein [Fusobacterium sp. 7_1] Length = 533 Score = 90.5 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 44/89 (49%) Query: 9 LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68 +I E ++G +D V ++ ++ + L+ I + HNHPSGN NPS ADI +T I Sbjct: 235 VINCESIAKGGLDKATVDLKILIPKILDKRVAGISVSHNHPSGNSNPSRADIELTNAIEK 294 Query: 69 TLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 N + DH ++ SF +I Sbjct: 295 MCKKFNKNLLDHYVVSSSKVFSFLNEGLI 323 >gi|146329081|ref|YP_001209721.1| response regulator receiver domain-containing protein [Dichelobacter nodosus VCS1703A] gi|146232551|gb|ABQ13529.1| response regulator receiver domain protein-DNA repair protein RadC [Dichelobacter nodosus VCS1703A] Length = 401 Score = 90.1 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 3/98 (3%) Query: 1 LFLDKHNILIADEVQ--SRGT-IDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSD 57 L L++ N +A E + G+ + V V R++V+ L+ A +++LVHNHP+ + S+ Sbjct: 302 LLLNQKNQYLAYERIGQAFGSEVSQVNVSCRKLVKSVLDSDAAAVVLVHNHPAQSTELSE 361 Query: 58 ADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 +D+ T+ I L PL + + DH ++ + +S + Sbjct: 362 SDLQTTKFIENFLKPLGVRLLDHFVVAGNQVISLRETG 399 >gi|293402942|ref|ZP_06647039.1| conserved hypothetical protein [Escherichia coli FVEC1412] gi|291429857|gb|EFF02871.1| conserved hypothetical protein [Escherichia coli FVEC1412] Length = 68 Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 41/68 (60%) Query: 30 IVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFV 89 +++R L +A +++L HNHPSG PS AD +T+ ++ L ++I V DH+I+G Sbjct: 1 MIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGSQVF 60 Query: 90 SFKGLRII 97 SF ++ Sbjct: 61 SFAEYGLL 68 >gi|183014127|dbj|BAG24384.1| hypothetical protein [Staphylococcus saprophyticus subsp. saprophyticus] Length = 139 Score = 90.1 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 51/89 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + ++ N + S G+I+ ++ REI + + +A SI++ HNHPSG+ PS DI Sbjct: 49 ICMNSKNEPTHIQSLSIGSINQTMIHPREIFKTAILSNANSIMIGHNHPSGDVTPSPEDI 108 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFV 89 N+T+ ++ + I+ +DHII +++ Sbjct: 109 NVTERLMLISEMMGILFYDHIIFSDSSYL 137 >gi|85374857|ref|YP_458919.1| DNA repair protein RadC [Erythrobacter litoralis HTCC2594] gi|84787940|gb|ABC64122.1| DNA repair protein RadC [Erythrobacter litoralis HTCC2594] Length = 149 Score = 89.7 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 46/97 (47%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++ D + DE + G + + + R +V R L + A +IL HNH SGN PS+ DI Sbjct: 52 VYCDDRQRYLHDETLTIGGENSLVLRARPLVHRALTIGAGGLILAHNHLSGNCQPSEKDI 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + L + + DH+I +D F S + Sbjct: 112 VATHRLQKLGAELELTLIDHMIFTRDRFFSMAAGGFL 148 >gi|160943191|ref|ZP_02090427.1| hypothetical protein FAEPRAM212_00677 [Faecalibacterium prausnitzii M21/2] gi|158445430|gb|EDP22433.1| hypothetical protein FAEPRAM212_00677 [Faecalibacterium prausnitzii M21/2] gi|295105228|emb|CBL02772.1| DNA repair proteins [Faecalibacterium prausnitzii SL3/3] Length = 239 Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 46/95 (48%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + A GT D V + I+ +V ++ +++L HNHP+G PS D++ Sbjct: 132 LDSRKRVRAAVWLREGTSDRVSLDIKNVVAAAIKGGTDAVVLCHNHPNGVALPSLEDMDA 191 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T +I L +N+ + DH I+ + S + + Sbjct: 192 TGSIARALGLVNVHLLDHFILTDTEYFSMRDANRL 226 >gi|226326898|ref|ZP_03802416.1| hypothetical protein PROPEN_00758 [Proteus penneri ATCC 35198] gi|225204735|gb|EEG87089.1| hypothetical protein PROPEN_00758 [Proteus penneri ATCC 35198] Length = 198 Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 45/65 (69%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD N LIA E +GTI+ V V+ REIV++ ++ +ATSIIL HNHPSG PS AD Sbjct: 127 LFLDNQNQLIAFEEMFKGTINRVEVHPREIVRQSIKKNATSIILAHNHPSGVCEPSLADK 186 Query: 61 NMTQN 65 +T+ Sbjct: 187 EITEK 191 >gi|225019208|ref|ZP_03708400.1| hypothetical protein CLOSTMETH_03161 [Clostridium methylpentosum DSM 5476] gi|224948060|gb|EEG29269.1| hypothetical protein CLOSTMETH_03161 [Clostridium methylpentosum DSM 5476] Length = 226 Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 D + LIA ++ ++GT D V ++EIVQ +A ++ + HNHP G NPS +D+ Sbjct: 130 CFDNASKLIACQMLAKGTADTVLFPVKEIVQFACNRNAANVAIAHNHPMGLCNPSSSDVT 189 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRII 97 + ++ TL + I + DHII+GK+ +S ++ Sbjct: 190 NSTDLKETLRKIQIRLVDHIIVGKNGDALSLVEYGVL 226 >gi|322366576|gb|ADW95362.1| hypothetical protein [Staphylococcus cohnii] Length = 162 Score = 89.0 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 50/90 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + ++ N + S G+I+ ++ REI + + +A SI++ HNHPSG+ PS DI Sbjct: 63 ICMNSKNEPTHIQTLSIGSINQSIIHPREIFKTAILSNANSIMIGHNHPSGDVTPSPEDI 122 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90 N+T+ ++ + I+ +DHI+ + S Sbjct: 123 NITERLMLISEMMGILFYDHIVFSESHTHS 152 >gi|312880415|ref|ZP_07740215.1| DNA repair protein RadC [Aminomonas paucivorans DSM 12260] gi|310783706|gb|EFQ24104.1| DNA repair protein RadC [Aminomonas paucivorans DSM 12260] Length = 222 Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 47/89 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++V S G +D V +R + +R + L A ++L HNHP G+P S+ D Sbjct: 125 LFLDPKERCLDEQVVSYGGLDGAFVDLRFLWRRAVRLDAARVVLWHNHPCGDPRLSEEDR 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFV 89 +T++ L L I + H ++ AF Sbjct: 185 ALTKHCRECLRFLGIELAGHYVLAGGAFW 213 >gi|85709335|ref|ZP_01040400.1| putative DNA repair protein [Erythrobacter sp. NAP1] gi|85688045|gb|EAQ28049.1| putative DNA repair protein [Erythrobacter sp. NAP1] Length = 140 Score = 88.2 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 45/97 (46%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LF+D + D G + + IRE+ Q L + A IIL HNHPSG PS D+ Sbjct: 44 LFVDNTRSYLGDTPIGSGAAGSLSMRIRELFQAALSVDAHGIILAHNHPSGLCRPSAYDV 103 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ + L+I + DH+I A S + + Sbjct: 104 EATRKLKAIAQTLDIELLDHLIFTTSAVYSMRAGGQL 140 >gi|291530928|emb|CBK96513.1| DNA repair proteins [Eubacterium siraeum 70/3] Length = 228 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD ++ E+ S G ++ V I ++++ ++ +++ HNHP G+ PS D Sbjct: 125 IFLDSEYCFMSQEIISTGALEQVRPDIMRLLEKAVQKRCPIVVMTHNHPRGSEMPSTEDK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+N+ L I + DH+I+G +S + I+ Sbjct: 185 IMTRNLFNLLEKAGIYLADHVIVGMHGSLSMRENGIL 221 >gi|291557560|emb|CBL34677.1| DNA repair proteins [Eubacterium siraeum V10Sc8a] Length = 228 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD ++ E+ S G ++ V I ++++ ++ +++ HNHP G+ PS D Sbjct: 125 IFLDSEYCFMSQEIISTGALEQVRPDIMRLLEKAVQKRCPIVVMTHNHPRGSEMPSTEDK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+N+ L I + DH+I+G +S + I+ Sbjct: 185 IMTRNLFNLLEKAGIYLADHVIVGMHGSLSMRENGIL 221 >gi|167750401|ref|ZP_02422528.1| hypothetical protein EUBSIR_01375 [Eubacterium siraeum DSM 15702] gi|167656552|gb|EDS00682.1| hypothetical protein EUBSIR_01375 [Eubacterium siraeum DSM 15702] Length = 228 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 51/97 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FLD ++ E+ S G ++ V I ++++ ++ +++ HNHP G+ PS D Sbjct: 125 IFLDSEYCFMSQEIISTGALEQVRPDIMRLLEKAVQKRCPIVVMTHNHPRGSEMPSTEDK 184 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+N+ L I + DH+I+G +S + I+ Sbjct: 185 IMTRNLFNLLEKAGIYLADHVIVGMHGSLSMRENGIL 221 >gi|218135236|ref|ZP_03464040.1| hypothetical protein BACPEC_03141 [Bacteroides pectinophilus ATCC 43243] gi|217990621|gb|EEC56632.1| hypothetical protein BACPEC_03141 [Bacteroides pectinophilus ATCC 43243] Length = 104 Score = 88.2 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 2/76 (2%) Query: 24 PVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIII 83 + RE+ + + +A S++L+H HPSGN PS AD MT + + I + DHII+ Sbjct: 1 MAHPRELFKSSILSNAASMMLIHCHPSGNVFPSKADTMMTDRMNKLCELMGIPLIDHIIV 60 Query: 84 GKD--AFVSFKGLRII 97 G D F SF+ +I Sbjct: 61 GGDNREFFSFREKGMI 76 >gi|158320354|ref|YP_001512861.1| DNA repair protein RadC [Alkaliphilus oremlandii OhILAs] gi|158140553|gb|ABW18865.1| DNA repair protein RadC [Alkaliphilus oremlandii OhILAs] Length = 156 Score = 87.8 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 1/95 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L +D N I + + G +V V EI + L +ATSII+ HNHPSG PS DI Sbjct: 51 LCIDSSNYAINVAILNIGNNKNVEVVPSEIFKIALLSNATSIIICHNHPSGLLEPSQYDI 110 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGL 94 +T+ I L I + D +I+G + S + Sbjct: 111 EVTKKIGRIGYLLGIKLIDSMIMGYNGEYFSMRNE 145 >gi|295101804|emb|CBK99349.1| DNA repair protein radc [Faecalibacterium prausnitzii L2-6] Length = 244 Score = 87.8 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 49/95 (51%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + + + G V + ++++V L S++L HNHP+G P PS D+ Sbjct: 133 LDSRSRVKSVYWLKEGNSRMVSLEVKDVVSAALRGGTESVVLCHNHPNGVPLPSREDLAA 192 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+NI+ L + I + DHII+ ++ + S + + Sbjct: 193 TENIVRALGLVKIRLRDHIILAENDYFSMRESNRL 227 >gi|291542539|emb|CBL15649.1| DNA repair proteins [Ruminococcus bromii L2-63] Length = 235 Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 1/97 (1%) Query: 1 LFL-DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59 L L D +I ++ S+G+++ + +R+IV L +A + + HNHPSG PS +D Sbjct: 130 LMLGDAKGKMIYFDIISKGSLNSSDMPVRKIVDLSLRHNAKTAFIAHNHPSGTALPSGSD 189 Query: 60 INMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 ++ T + +TL + + + DH II D +VS + R+ Sbjct: 190 LDTTIVLKSTLATVGVELIDHFIITDDDYVSLRESRL 226 >gi|296392681|ref|YP_003657565.1| DNA repair protein RadC [Segniliparus rotundus DSM 44985] gi|296179828|gb|ADG96734.1| DNA repair protein RadC [Segniliparus rotundus DSM 44985] Length = 216 Score = 87.4 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 41/87 (47%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D L E+ + G+ PV +REI+ L + L HNHPSG+P PS AD +T Sbjct: 127 DARLRLRRTEIVAMGSATACPVPVREILATVLRHDGVAFALAHNHPSGDPTPSAADRALT 186 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVS 90 + + DHI++ + + S Sbjct: 187 DMLHNAAWATGLRFLDHIVVAGERWRS 213 >gi|257451830|ref|ZP_05617129.1| DNA repair protein radC-like protein [Fusobacterium sp. 3_1_5R] Length = 366 Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 2/94 (2%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D + + E G ++ V I+ ++ L + I L+HNHPSGN +PS D+ +T Sbjct: 241 DDKYRITSMETVFVGGLNRSIVDIKTLIPYFLN-ESKGICLLHNHPSGNNSPSRQDLELT 299 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++I N ++DH I+G SF+ +I Sbjct: 300 RDISEIANQFKKQMYDHFIVG-SKVFSFREESLI 332 >gi|240146799|ref|ZP_04745400.1| DNA repair protein RadC [Roseburia intestinalis L1-82] gi|257201037|gb|EEU99321.1| DNA repair protein RadC [Roseburia intestinalis L1-82] Length = 102 Score = 86.3 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Query: 26 YIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGK 85 + RE+ + + +A S++L+H HPSGN PS AD MT + + I + DHII+G Sbjct: 1 HPRELFKSSILSNAASMMLIHCHPSGNIFPSKADTMMTDRMNKLCELIGIPLLDHIIVGG 60 Query: 86 DA--FVSFKGLRII 97 D F SFK +I Sbjct: 61 DNRAFFSFKEKGMI 74 >gi|317058385|ref|ZP_07922870.1| DNA repair protein [Fusobacterium sp. 3_1_5R] gi|313684061|gb|EFS20896.1| DNA repair protein [Fusobacterium sp. 3_1_5R] Length = 325 Score = 86.3 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 2/94 (2%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D + + E G ++ V I+ ++ L + I L+HNHPSGN +PS D+ +T Sbjct: 200 DDKYRITSMETVFVGGLNRSIVDIKTLIPYFLN-ESKGICLLHNHPSGNNSPSRQDLELT 258 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++I N ++DH I+G SF+ +I Sbjct: 259 RDISEIANQFKKQMYDHFIVG-SKVFSFREESLI 291 >gi|162454769|ref|YP_001617136.1| DNA repair protein [Sorangium cellulosum 'So ce 56'] gi|161165351|emb|CAN96656.1| DNA repair protein [Sorangium cellulosum 'So ce 56'] Length = 259 Score = 86.3 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 1/96 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD N + ++G + V R+I++ L +A++++LVHNHPSG+ PS D+ M Sbjct: 149 LDGRNGMRGARRVAQGGLHGCSVTARDILRAALSDAASALVLVHNHPSGDSAPSPEDVAM 208 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFV-SFKGLRII 97 T + + + + DH+I+ D S L +I Sbjct: 209 TNAVAAAGEVIGVPLVDHVILAPDGHYSSLLDLGMI 244 >gi|48243599|gb|AAT40757.1| putative DNA repair protein [Haemophilus influenzae] Length = 78 Score = 85.9 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 47/78 (60%) Query: 20 IDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHD 79 + + V IREI+++ L+L+A++II+ HNHP+GN PSDAD +T+ + + I + D Sbjct: 1 VSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADKYVTKRLKEACELMEIKLLD 60 Query: 80 HIIIGKDAFVSFKGLRII 97 H I+ A F +I Sbjct: 61 HFIVSGSASFCFTDNHLI 78 >gi|257438385|ref|ZP_05614140.1| putative DNA repair protein RadC [Faecalibacterium prausnitzii A2-165] gi|257199216|gb|EEU97500.1| putative DNA repair protein RadC [Faecalibacterium prausnitzii A2-165] Length = 241 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 49/95 (51%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + + GT D V + I+++V L+ S++L HNHP+G PS D+ Sbjct: 133 LDGRSRIKGLFWLRDGTSDRVSLEIKDVVAAALKGGTDSVVLCHNHPNGVALPSREDLMA 192 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+NI+ L + + + DHII+ + + S + + Sbjct: 193 TENIVRALGLVKVHLRDHIILTESEYFSMREANRL 227 >gi|210611806|ref|ZP_03289040.1| hypothetical protein CLONEX_01239 [Clostridium nexile DSM 1787] gi|210151856|gb|EEA82863.1| hypothetical protein CLONEX_01239 [Clostridium nexile DSM 1787] Length = 184 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 1/92 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L + +I + S G++D V+ IV+ + A+S+IL+HNHPSGNP S AD ++ Sbjct: 74 LARSGEVINASICSVGSVDCAYVFAGGIVRTAVMSGASSVILIHNHPSGNPRASKADWDV 133 Query: 63 TQNIITTLNPLNIIVHDHIIIG-KDAFVSFKG 93 T+ + N+ + DHIIIG + +S K Sbjct: 134 TKRLAIACKIFNLELLDHIIIGANNQKISLKE 165 >gi|261367039|ref|ZP_05979922.1| DNA repair protein RadC [Subdoligranulum variabile DSM 15176] gi|282571158|gb|EFB76693.1| DNA repair protein RadC [Subdoligranulum variabile DSM 15176] Length = 244 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/97 (31%), Positives = 50/97 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + LD + D + G + V + R++++ AT IL HNHP+G P PS+AD+ Sbjct: 133 ILLDDKCCPVRDLRIAEGVPNRVHIDTRKLLRDVARTDATCGILAHNHPTGLPLPSEADV 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T I+ L+PL + V DHII+ + S + + Sbjct: 193 IATVGIMKALDPLGVSVIDHIIVAGEDSCSMRARGCL 229 >gi|319937990|ref|ZP_08012390.1| hypothetical protein HMPREF9488_03226 [Coprobacillus sp. 29_1] gi|319806896|gb|EFW03535.1| hypothetical protein HMPREF9488_03226 [Coprobacillus sp. 29_1] Length = 146 Score = 85.5 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 43/95 (45%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD N +I G D V R++ + + +A I VHNH +G+ PS D + Sbjct: 52 LDTRNRIIEVFEVFGGESDIKIVTPRKMFKSLVLCNAYRFICVHNHLNGDTCPSAEDKQL 111 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + + L I + D I+G + +SF+ ++ Sbjct: 112 AKELQKYGEMLQIELLDFCIVGDNNILSFQNKSLL 146 >gi|154499911|ref|ZP_02037949.1| hypothetical protein BACCAP_03568 [Bacteroides capillosus ATCC 29799] gi|150271509|gb|EDM98766.1| hypothetical protein BACCAP_03568 [Bacteroides capillosus ATCC 29799] Length = 233 Score = 85.5 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 43/97 (44%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L +D + G ++ + R IV+ L +A+ +IL HNH SG PSD D Sbjct: 133 LCMDGKGKYLGCPKVGEGNVNAAEINARVIVEAALNHNASRVILAHNHVSGLALPSDEDK 192 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T + L + +I+ DH+I D VS + Sbjct: 193 QTTLYLRELLRQVGVILVDHLIFVDDDMVSMGDSGFL 229 >gi|317507551|ref|ZP_07965270.1| DNA repair protein RadC [Segniliparus rugosus ATCC BAA-974] gi|316254152|gb|EFV13503.1| DNA repair protein RadC [Segniliparus rugosus ATCC BAA-974] Length = 216 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 41/87 (47%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D L E+ +RG+ P+ +REI+ L S + HNHP G+P PS AD +T Sbjct: 127 DGKLRLRRTEIVARGSAKSCPMPVREILATVLRHDGVSFAVAHNHPGGDPTPSAADRALT 186 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVS 90 + + DHI++ + + S Sbjct: 187 DTLHNAAWTTGLRFLDHIVVAGEQWRS 213 >gi|294101601|ref|YP_003553459.1| DNA repair protein RadC [Aminobacterium colombiense DSM 12261] gi|293616581|gb|ADE56735.1| DNA repair protein RadC [Aminobacterium colombiense DSM 12261] Length = 224 Score = 85.1 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 50/89 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD +I+ E S G I+ + ++ + ++ + L A ++L+HNHP+G PS DI Sbjct: 128 LFLDGKGGVISKERVSYGGIEGAFLDVKYLFRKAVRLDARGMVLIHNHPNGTLRPSREDI 187 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFV 89 +T+ + +L+ L+I H I + +V Sbjct: 188 MLTEFVERSLSVLDISFVGHFIAARGEWV 216 >gi|254304164|ref|ZP_04971522.1| possible primase/helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324356|gb|EDK89606.1| possible primase/helicase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 922 Score = 84.7 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 45/94 (47%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D + S+G D+ V + I L+ IIL HNHPSG NPS AD ++T Sbjct: 714 DGGYNISEVVTISQGGADYAKVDPKHIYPHLLDEKLKGIILCHNHPSGVANPSRADNDLT 773 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +N+ N V DHII+GK+ + +I Sbjct: 774 ENLTKRAAFFNKEVLDHIIVGKEGVYKYSENDLI 807 >gi|296269060|ref|YP_003651692.1| DNA repair protein RadC [Thermobispora bispora DSM 43833] gi|296091847|gb|ADG87799.1| DNA repair protein RadC [Thermobispora bispora DSM 43833] Length = 224 Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 39/85 (45%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D ++ V S G DH +R+I+ L + L HNHP G+ PS AD+ +T Sbjct: 129 DTRGTVLRRAVVSEGGSDHTSAPVRDIITTVLVSGGAAFGLAHNHPGGSLEPSPADVEVT 188 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAF 88 + + + DH+I+ A+ Sbjct: 189 VRLRAAAETVGLRFLDHLIVTDTAW 213 >gi|319937866|ref|ZP_08012266.1| hypothetical protein HMPREF9488_03102 [Coprobacillus sp. 29_1] gi|319806772|gb|EFW03411.1| hypothetical protein HMPREF9488_03102 [Coprobacillus sp. 29_1] Length = 124 Score = 84.7 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 48/94 (51%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + SRG+I+ R++ +R L +A++ ++ HNHPS NP PS DIN Sbjct: 30 LDTQLNMTGFFEVSRGSIEESLCVPRDVFKRLLLANASAFVIAHNHPSENPEPSLEDINN 89 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 + + + I + D++I D +SFK I Sbjct: 90 ARALREASEIMGIKMVDYLIAAGDNIISFKKENI 123 >gi|324015349|gb|EGB84568.1| DNA repair protein [Escherichia coli MS 60-1] Length = 63 Score = 84.3 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 37/63 (58%) Query: 35 LELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 + +A +++L HNHPSG PS AD +T+ ++ L ++I V DH+I+G SF Sbjct: 1 MYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALALVDIRVPDHLIVGGSQVFSFAEH 60 Query: 95 RII 97 ++ Sbjct: 61 GLL 63 >gi|220931910|ref|YP_002508818.1| DNA repair protein RadC [Halothermothrix orenii H 168] gi|219993220|gb|ACL69823.1| DNA repair protein RadC [Halothermothrix orenii H 168] Length = 240 Score = 83.9 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 1/96 (1%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRC-LELSATSIILVHNHPSGNPNPSDADIN 61 LD+ N LI E GT + + + I L TS+I+ N PS D+ Sbjct: 145 LDEDNYLITWEFLGEGTNKPIKLDPKTIFHTSFLLEEKTSVIIAENMNDNFTRPSQKDVL 204 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ ++ L I DHI+I D + S+ L +I Sbjct: 205 VTKRLVKAGKILGIDFLDHIVIEADGYHSYDQLNLI 240 >gi|227537790|ref|ZP_03967839.1| possible DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33300] gi|227242404|gb|EEI92419.1| possible DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33300] Length = 74 Score = 83.6 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 41/72 (56%) Query: 24 PVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIII 83 V +R I+ L +AT I++ HNHPSG PS AD +T II L+I + DHI++ Sbjct: 1 MVDMRLIMSLALLCNATRIVVAHNHPSGTMTPSLADHALTNKIIEAGKVLDIQLLDHIVL 60 Query: 84 GKDAFVSFKGLR 95 +++ SFK Sbjct: 61 TSNSYYSFKDQG 72 >gi|288917999|ref|ZP_06412358.1| DNA repair protein RadC [Frankia sp. EUN1f] gi|288350654|gb|EFC84872.1| DNA repair protein RadC [Frankia sp. EUN1f] Length = 223 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 43/85 (50%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D + ++ + S+GT + +RE++ + L ++ L HNHP G+P PS AD +T Sbjct: 130 DGNGAVLRASLLSQGTSTASTLSVRELLTQVLRCGGSAFGLAHNHPGGDPEPSLADRQVT 189 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAF 88 I L + DH+I+ + + Sbjct: 190 HRIQEAAEVLGLRFLDHVIVTDETW 214 >gi|323951754|gb|EGB47628.1| RadC family protein DNA repair protein [Escherichia coli H252] Length = 61 Score = 83.2 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 37 LSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +A +++L HNHPSG PS AD +T+ ++ L ++I V DH+I+G + SF + Sbjct: 1 HNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGL 60 Query: 97 I 97 + Sbjct: 61 L 61 >gi|54022910|ref|YP_117152.1| putative DNA repair protein [Nocardia farcinica IFM 10152] gi|54014418|dbj|BAD55788.1| putative DNA repair protein [Nocardia farcinica IFM 10152] Length = 230 Score = 82.8 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 27/88 (30%), Positives = 42/88 (47%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L D + L + G +D V V +REI+ L S +VHNHPSG+P+PS D Sbjct: 131 LICDTQHRLRRHVFVAEGAVDRVAVPVREILNTVLRHDGRSFAVVHNHPSGDPHPSPDDR 190 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAF 88 T + + + DHI++ + + Sbjct: 191 RATTLLHAAATTVGLRFLDHIVLAGEHW 218 >gi|332185574|ref|ZP_08387322.1| hypothetical protein SUS17_531 [Sphingomonas sp. S17] gi|332014552|gb|EGI56609.1| hypothetical protein SUS17_531 [Sphingomonas sp. S17] Length = 130 Score = 82.8 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 +L L+ G D V + IV+ + SA +++ HNHP G+P PS AD+ Sbjct: 36 YLGSERSLLGLRHV-MGHADSARVPLTHIVRDAILFSARGVLIAHNHPGGDPRPSAADLA 94 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +T+ + L+ L + + DH+I G S + L ++ Sbjct: 95 LTRRLAQGLDLLEVRLFDHLIFGSGQVTSLRALGML 130 >gi|126698739|ref|YP_001087636.1| DNA repair protein [Clostridium difficile 630] gi|122974104|sp|Q18B06|Y1144_CLOD6 RecName: Full=UPF0758 protein CD1144 gi|115250176|emb|CAJ67997.1| DNA repair protein RadC homolog [Clostridium difficile] Length = 235 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 41/69 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I+D S GT+ V+ RE+ + + SA+ II++HNHPSG+ PS D Sbjct: 139 VLLNTKNEIISDVDVSIGTLSSSLVHPREVFKEAIRRSASKIIVMHNHPSGSVEPSREDK 198 Query: 61 NMTQNIITT 69 N+T +I Sbjct: 199 NITSRLIKC 207 >gi|296451131|ref|ZP_06892872.1| DNA repair protein RadC [Clostridium difficile NAP08] gi|296880517|ref|ZP_06904479.1| DNA repair protein RadC [Clostridium difficile NAP07] gi|296259952|gb|EFH06806.1| DNA repair protein RadC [Clostridium difficile NAP08] gi|296428471|gb|EFH14356.1| DNA repair protein RadC [Clostridium difficile NAP07] Length = 235 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 41/69 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I+D S GT+ V+ RE+ + + SA+ II++HNHPSG+ PS D Sbjct: 139 VLLNTKNEIISDVDVSVGTLSSSLVHPREVFKEAIRRSASKIIVMHNHPSGSVEPSREDK 198 Query: 61 NMTQNIITT 69 N+T +I Sbjct: 199 NITSRLIKC 207 >gi|254974678|ref|ZP_05271150.1| DNA repair protein [Clostridium difficile QCD-66c26] gi|255092066|ref|ZP_05321544.1| DNA repair protein [Clostridium difficile CIP 107932] gi|255100158|ref|ZP_05329135.1| DNA repair protein [Clostridium difficile QCD-63q42] gi|255306048|ref|ZP_05350220.1| DNA repair protein [Clostridium difficile ATCC 43255] gi|255313803|ref|ZP_05355386.1| DNA repair protein [Clostridium difficile QCD-76w55] gi|255516484|ref|ZP_05384160.1| DNA repair protein [Clostridium difficile QCD-97b34] gi|255649584|ref|ZP_05396486.1| DNA repair protein [Clostridium difficile QCD-37x79] gi|260682749|ref|YP_003214034.1| DNA repair protein [Clostridium difficile CD196] gi|260686347|ref|YP_003217480.1| DNA repair protein [Clostridium difficile R20291] gi|306519710|ref|ZP_07406057.1| DNA repair protein [Clostridium difficile QCD-32g58] gi|260208912|emb|CBA61903.1| DNA repair protein [Clostridium difficile CD196] gi|260212363|emb|CBE03177.1| DNA repair protein [Clostridium difficile R20291] Length = 219 Score = 82.4 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 41/69 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I+D S GT+ V+ RE+ + + SA+ II++HNHPSG+ PS D Sbjct: 123 VLLNTKNEIISDVDVSIGTLSSSLVHPREVFKEAIRRSASKIIVMHNHPSGSVEPSREDK 182 Query: 61 NMTQNIITT 69 N+T +I Sbjct: 183 NITSRLIKC 191 >gi|241895713|ref|ZP_04783009.1| possible DNA repair protein RadC [Weissella paramesenteroides ATCC 33313] gi|241871080|gb|EER74831.1| possible DNA repair protein RadC [Weissella paramesenteroides ATCC 33313] Length = 144 Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 43/93 (46%) Query: 5 KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQ 64 +I + GT+D V ++ R++ + + +A IL H HPSGN N S AD + Sbjct: 34 TQMTIIEIYQVALGTLDSVSIHPRDVFRHLVATNAYGFILCHYHPSGNLNASSADKSAMS 93 Query: 65 NIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + + + D +II + S++ ++ Sbjct: 94 QMAMCSQIMQVHFLDFMIISTKGYRSYRTEHLL 126 >gi|282857436|ref|ZP_06266669.1| DNA repair protein RadC [Pyramidobacter piscolens W5455] gi|282584721|gb|EFB90056.1| DNA repair protein RadC [Pyramidobacter piscolens W5455] Length = 239 Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 50/88 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++LD+ ++ IADE S G +D + +++R + L+ ++ LVHNHP G+ PSD D+ Sbjct: 130 IYLDRKDVPIADERLSYGGVDGAMLDAPYLMRRAVRLNCAALALVHNHPDGDLTPSDDDL 189 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAF 88 +++++ L L I + H I G Sbjct: 190 FLSRSVARMLQVLQIGYYGHYIAGGGRI 217 >gi|255655143|ref|ZP_05400552.1| DNA repair protein [Clostridium difficile QCD-23m63] Length = 219 Score = 82.0 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 41/69 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L+ N +I+D S GT+ V+ RE+ + + SA+ II++HNHPSG+ PS D Sbjct: 123 VLLNTKNEIISDVDVSVGTLSSSLVHPREVFKEAIRRSASKIIVMHNHPSGSVEPSREDK 182 Query: 61 NMTQNIITT 69 N+T +I Sbjct: 183 NITSRLIKC 191 >gi|116750704|ref|YP_847391.1| DNA repair protein RadC [Syntrophobacter fumaroxidans MPOB] gi|116699768|gb|ABK18956.1| DNA repair protein RadC [Syntrophobacter fumaroxidans MPOB] Length = 225 Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 41/93 (44%), Positives = 57/93 (61%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N LI E RG+++ V+ R +V+ L+ AT++IL HNHP G+PNPS AD + Sbjct: 130 LNSTNDLIQMEEIQRGSVNRTAVFPRLVVEASLKHRATAVILAHNHPGGDPNPSAADQQL 189 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95 T+ + LN L+IIVHDHIII + SF Sbjct: 190 TRRLKRILNDLDIIVHDHIIIAGPRYYSFAEHG 222 >gi|260655709|ref|ZP_05861182.1| DNA repair protein RadC [Jonquetella anthropi E3_33 E1] gi|260629626|gb|EEX47820.1| DNA repair protein RadC [Jonquetella anthropi E3_33 E1] Length = 229 Score = 81.3 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 2/91 (2%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 F D + L+ DE S G D + + +++R + L + L+HNHP PS D Sbjct: 131 FFDDQDRLLGDERLSYGGPDGAALDMPYLLRRAVRLDCRGVALLHNHPDRVSEPSMEDRK 190 Query: 62 MTQNIITTLNPLNIIVHDH-IIIGKD-AFVS 90 +T + L LNI H +I+G + VS Sbjct: 191 LTDYLACRLELLNIRFIGHFLIVGGRVSVVS 221 >gi|189346988|ref|YP_001943517.1| DNA repair protein RadC [Chlorobium limicola DSM 245] gi|189341135|gb|ACD90538.1| DNA repair protein RadC [Chlorobium limicola DSM 245] Length = 77 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Query: 38 SATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRI 96 +A ++ILVHNHPSGNP PS+AD +T+ I ++ N + I + DH+IIG + SF+ + Sbjct: 16 NAYTLILVHNHPSGNPEPSNADKQVTKQIRSSANIIGIELLDHVIIGTNGNYFSFRQEGL 75 >gi|254258430|ref|ZP_04949484.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1710a] gi|254217119|gb|EET06503.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1710a] Length = 454 Score = 80.5 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 31/76 (40%), Positives = 47/76 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + L+ E + G++ + VY REIV+R L L+A ++I+ HNHPSG PS AD Sbjct: 182 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 241 Query: 61 NMTQNIITTLNPLNII 76 +T+ + L ++I Sbjct: 242 RLTRVLRDALALVDIK 257 >gi|103486819|ref|YP_616380.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256] gi|98976896|gb|ABF53047.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256] Length = 181 Score = 80.5 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 4/100 (4%) Query: 1 LFL---DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSD 57 L L D + L+ E T + + L A ++++ HNHPSG PSD Sbjct: 83 LLLAGFDTYQRLVRLERIDGETPRRCII-PPRCWRALLGGGAATVVMAHNHPSGIAWPSD 141 Query: 58 ADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 AD+ T++ L + + + DH+I D SF+ ++ Sbjct: 142 ADMAATRDAARFLRTIGVDLVDHLIFVADGHFSFRTAGML 181 >gi|162448723|ref|YP_001611090.1| DNA repair protein [Sorangium cellulosum 'So ce 56'] gi|161159305|emb|CAN90610.1| DNA repair protein [Sorangium cellulosum 'So ce 56'] Length = 208 Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 43/87 (49%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD H + + +RG D V I++ L+++A +L HNHPSG+P P+ D M Sbjct: 117 LDSHGRVRETRMLARGVDDAVHAGRSTILRTALDMAAVGFVLAHNHPSGDPTPTAEDHAM 176 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFV 89 T+ + LN+ + H+I+ Sbjct: 177 TEELRDLSYALNVPLRAHVIVTPSGRY 203 >gi|257893433|ref|ZP_05673086.1| predicted protein [Enterococcus faecium 1,231,408] gi|289566512|ref|ZP_06446935.1| conserved hypothetical protein [Enterococcus faecium D344SRF] gi|257829812|gb|EEV56419.1| predicted protein [Enterococcus faecium 1,231,408] gi|289161666|gb|EFD09543.1| conserved hypothetical protein [Enterococcus faecium D344SRF] Length = 68 Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 28/51 (54%) Query: 47 NHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +PSGN PS D+N T+ I + I V DH+IIG+ + S + ++ Sbjct: 15 YYPSGNVIPSQQDMNFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 65 >gi|257879581|ref|ZP_05659234.1| DNA repair protein RadC [Enterococcus faecium 1,230,933] gi|257882600|ref|ZP_05662253.1| DNA repair protein RadC [Enterococcus faecium 1,231,502] gi|257813809|gb|EEV42567.1| DNA repair protein RadC [Enterococcus faecium 1,230,933] gi|257818258|gb|EEV45586.1| DNA repair protein RadC [Enterococcus faecium 1,231,502] Length = 72 Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 28/51 (54%) Query: 47 NHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +PSGN PS D+N T+ I + I V DH+IIG+ + S + ++ Sbjct: 19 YYPSGNVIPSQQDMNFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 69 >gi|320528575|ref|ZP_08029731.1| DNA repair protein [Solobacterium moorei F0204] gi|320131029|gb|EFW23603.1| DNA repair protein [Solobacterium moorei F0204] Length = 682 Score = 78.6 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 2/97 (2%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ N I V + IDH + IR + + + +A+ ++++HNHP+ + SD+D Sbjct: 65 LNSANEPINFSVATMKAIDHAGMDIRNLFKSTVSSNASKVMVLHNHPNEHVVISDSDKIF 124 Query: 63 TQNIITTLNPLNIIVHDHIII--GKDAFVSFKGLRII 97 T NI LN+ DH+++ G + SF+ ++ Sbjct: 125 TANIYAATQQLNLEFVDHVVVSKGAEEIYSFRENGLL 161 >gi|300919527|ref|ZP_07136025.1| DNA repair protein [Escherichia coli MS 115-1] gi|300413421|gb|EFJ96731.1| DNA repair protein [Escherichia coli MS 115-1] Length = 56 Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 33/56 (58%) Query: 42 IILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +IL HNHPSG PS AD +TQ ++ L ++I V DH+I+G SF ++ Sbjct: 1 MILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 56 >gi|271963692|ref|YP_003337888.1| DNA repair protein RadC [Streptosporangium roseum DSM 43021] gi|270506867|gb|ACZ85145.1| DNA repair protein RadC [Streptosporangium roseum DSM 43021] Length = 218 Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 42/80 (52%) Query: 9 LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68 + + S G DH P +REI+ L +S L HNHPSG+ +PS AD+ +T + Sbjct: 134 VTRKTIVSEGGSDHAPAPVREIITTVLTSGGSSFGLAHNHPSGSLDPSPADLEVTARLSE 193 Query: 69 TLNPLNIIVHDHIIIGKDAF 88 + + + DH+I+ A+ Sbjct: 194 AAETVGLRLLDHVIVTDTAW 213 >gi|307693174|ref|ZP_07635411.1| DNA repair protein RadC [Ruminococcaceae bacterium D16] Length = 229 Score = 78.2 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 40/93 (43%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD ++ + G+I+ + R I + + L A + + HNH S PS AD Sbjct: 127 LCLDGKRQVLGVRKVAEGSIEMAEMNARRIAEEAMGLRAARVYVAHNHVSNLAIPSQADW 186 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 T + L P+ I + DH++ VS Sbjct: 187 LTTDTLRAILAPIGITLEDHLVFVDGDMVSLNE 219 >gi|325677919|ref|ZP_08157561.1| DNA repair protein RadC [Ruminococcus albus 8] gi|324110473|gb|EGC04647.1| DNA repair protein RadC [Ruminococcus albus 8] Length = 229 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 1/94 (1%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 +K + V S G D V + E+ + L A +++L HNHP G +PSD DI MT Sbjct: 133 NKSGRISGCSVLSVGISDKVCFNVEELERFLLYNHADALVLSHNHPFGRGDPSDEDIMMT 192 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + I L I + DH+I+G D S + + I+ Sbjct: 193 RQIQAMLAG-RISLMDHVIVGADKVCSMRMMGIL 225 >gi|301327414|ref|ZP_07220657.1| DNA repair protein [Escherichia coli MS 78-1] gi|300846002|gb|EFK73762.1| DNA repair protein [Escherichia coli MS 78-1] Length = 56 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 34/56 (60%) Query: 42 IILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++L HNHPSG PS AD +T+ ++ L ++I V DH+I+G + SF ++ Sbjct: 1 MVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 56 >gi|30022528|ref|NP_834159.1| DNA repair protein radC [Bacillus cereus ATCC 14579] gi|29898086|gb|AAP11360.1| DNA repair protein radC [Bacillus cereus ATCC 14579] Length = 61 Score = 77.4 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 26/55 (47%), Positives = 33/55 (60%) Query: 43 ILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 I +HNHPSG+P PS DI +T+ ++ + I V DHIIIG FVS K I Sbjct: 7 ICLHNHPSGDPTPSREDIAVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 61 >gi|256962743|ref|ZP_05566914.1| predicted protein [Enterococcus faecalis HIP11704] gi|256953239|gb|EEU69871.1| predicted protein [Enterococcus faecalis HIP11704] gi|315578918|gb|EFU91109.1| DNA repair protein [Enterococcus faecalis TX0630] Length = 66 Score = 77.0 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%) Query: 35 LELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 + A + HPSGNP PS DI T+ + + I + DHII+G ++S + Sbjct: 1 MGSRAFFVCTKIYHPSGNPTPSPQDIQFTKRMEECGEMMGIQLLDHIIVGDSGYISLREE 60 Query: 95 RI 96 Sbjct: 61 NF 62 >gi|163785136|ref|ZP_02179835.1| DNA repair protein RadC [Hydrogenivirga sp. 128-5-R1-1] gi|159879597|gb|EDP73402.1| DNA repair protein RadC [Hydrogenivirga sp. 128-5-R1-1] Length = 212 Score = 77.0 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 40/79 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++ + N L+ EV + G+++ + R+I ++ +A IILVHNHP G+ PS DI Sbjct: 133 IYTNTLNELLGKEVVAVGSLNVLNARPRDIFYYAIKYNAYGIILVHNHPEGSCEPSKEDI 192 Query: 61 NMTQNIITTLNPLNIIVHD 79 T + + + D Sbjct: 193 EFTNLLKKLSLEMGFEILD 211 >gi|331683582|ref|ZP_08384180.1| putative DNA repair protein [Escherichia coli H299] gi|331079195|gb|EGI50395.1| putative DNA repair protein [Escherichia coli H299] Length = 118 Score = 77.0 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 34/51 (66%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L HNHPSG Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSG 117 >gi|330503745|ref|YP_004380614.1| DNA repair protein RadC [Pseudomonas mendocina NK-01] gi|328918031|gb|AEB58862.1| DNA repair protein RadC [Pseudomonas mendocina NK-01] Length = 126 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 26/59 (44%), Positives = 35/59 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59 LFLD + L+ RGTID VY RE+V+ L ++A ++I HNHPSGN + D Sbjct: 47 LFLDSQHRLLEYVELFRGTIDAAAVYPREVVKEALRVNAAAVIFSHNHPSGNVHSQSRD 105 >gi|162455784|ref|YP_001618151.1| DNA repair protein RadC [Sorangium cellulosum 'So ce 56'] gi|161166366|emb|CAN97671.1| DNA repair protein RadC [Sorangium cellulosum 'So ce 56'] Length = 211 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 44/87 (50%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD H + + +RG+ D + V +++ L+++A S +L HNHPSG+P P+ D M Sbjct: 120 LDTHGRVRETRLLARGSDDALHVGRATVLRTALDMAAHSFVLAHNHPSGDPTPTREDEAM 179 Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFV 89 T + L + + H+I+ Sbjct: 180 TLELRHLSAELLVPLTAHVIVTPSGRY 206 >gi|325264187|ref|ZP_08130919.1| DNA repair protein RadC [Clostridium sp. D5] gi|324030671|gb|EGB91954.1| DNA repair protein RadC [Clostridium sp. D5] Length = 171 Score = 76.2 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 2/97 (2%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L + +I + GT+D V RE+ + + +A SIIL+HNHPSG+ NPS+ D + Sbjct: 50 LKANGQIINMNIVCMGTLDQAIVSPREVFKSSILSNARSIILMHNHPSGSLNPSNEDKRI 109 Query: 63 TQNIITTLNPLNIIVHDHIII--GKDAFVSFKGLRII 97 T+ + L I + DHIII SFK + Sbjct: 110 TRRLWECGRLLGIDIADHIIIAGTSGEMFSFKERGYL 146 >gi|149276080|ref|ZP_01882225.1| putative DNA repair protein [Pedobacter sp. BAL39] gi|149233508|gb|EDM38882.1| putative DNA repair protein [Pedobacter sp. BAL39] Length = 83 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 38/64 (59%) Query: 34 CLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 + A+ I+L HNHPS N PS ADI++T I LNI + DH+I+ D ++SF Sbjct: 4 AINSGASGIVLAHNHPSMNLAPSKADIDITNQIKQGAALLNIKLIDHLIVTSDGYLSFAD 63 Query: 94 LRII 97 +++ Sbjct: 64 RQML 67 >gi|147677151|ref|YP_001211366.1| DNA repair proteins [Pelotomaculum thermopropionicum SI] gi|146273248|dbj|BAF58997.1| DNA repair proteins [Pelotomaculum thermopropionicum SI] Length = 196 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 36/58 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDA 58 L L+ N +I + S GT++ V+ RE+ + ++ SA +IILVHNHPSG+P P Sbjct: 135 LLLNTKNQVIGVDKVSVGTLNSSTVHPRELFRNAIKRSAAAIILVHNHPSGDPTPLKE 192 >gi|312902907|ref|ZP_07762104.1| DNA repair protein [Enterococcus faecalis TX0635] gi|310633679|gb|EFQ16962.1| DNA repair protein [Enterococcus faecalis TX0635] Length = 66 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 30/62 (48%) Query: 35 LELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 + A I +HPSGNP PS DI T+ + + I + DHII+G ++S + Sbjct: 1 MGSRAFFICTKIHHPSGNPTPSPQDIQFTKRMEECGEMMGIQLLDHIIVGDSGYISLREE 60 Query: 95 RI 96 Sbjct: 61 NF 62 >gi|288574635|ref|ZP_06392992.1| DNA repair protein RadC [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570376|gb|EFC91933.1| DNA repair protein RadC [Dethiosulfovibrio peptidovorans DSM 11002] Length = 214 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 43/85 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +FL ++ E+ S G D + IR ++ + L A ++LVHNHP G+ S D Sbjct: 123 IFLGDRERFLSKEMISFGGPDGASLDIRHFMRVAVRLDAYGVVLVHNHPDGSLESSAEDR 182 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGK 85 +T+ + L+ L I H H I+ + Sbjct: 183 TLTRIVRERLDALGIRFHGHYIVSR 207 >gi|154246894|ref|YP_001417852.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2] gi|154160979|gb|ABS68195.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2] Length = 106 Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 43/64 (67%) Query: 34 CLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 + S ++HNHPSG+P PS ADI+MT+ II PL I VHDHII+GKD S KG Sbjct: 43 AFQYDKASRRMMHNHPSGDPTPSRADIDMTRKIIDVAKPLGIEVHDHIIVGKDGHASLKG 102 Query: 94 LRII 97 LR+I Sbjct: 103 LRLI 106 >gi|158312692|ref|YP_001505200.1| DNA repair protein RadC [Frankia sp. EAN1pec] gi|158108097|gb|ABW10294.1| DNA repair protein RadC [Frankia sp. EAN1pec] Length = 220 Score = 75.5 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 41/80 (51%) Query: 9 LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68 ++ + ++G H P+ +R+++ L ++ + HNHP GNP PS D +T + Sbjct: 135 ILRARLLTQGASGHSPLSMRDLLGYVLRCGGSAFGVAHNHPDGNPEPSADDRRVTTRLRE 194 Query: 69 TLNPLNIIVHDHIIIGKDAF 88 + L + DH++I + + Sbjct: 195 SAALLGLRFLDHVVITDETW 214 >gi|254777459|ref|ZP_05218975.1| DNA repair protein RadC [Mycobacterium avium subsp. avium ATCC 25291] Length = 196 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 37/85 (43%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D N + S G + V +REI+ L + + HNHPSG SDAD +T Sbjct: 108 DSANHVKKVVTVSEGALARSIVPVREILNAVLRHDGRAFAIAHNHPSGAAEASDADRQVT 167 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAF 88 ++ + + H+++ D + Sbjct: 168 ASVRAAATTVGLRFLGHVVVANDRW 192 >gi|329296438|ref|ZP_08253774.1| hypothetical protein Pstas_07243 [Plautia stali symbiont] Length = 195 Score = 75.1 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 36/58 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDA 58 LFLD + ++ + G+I V V+ REIV+ L+L+A ++IL NHPSG P+ A Sbjct: 122 LFLDNQHRVLQAQKMFSGSIASVEVHPREIVREALKLNAAAVILARNHPSGMAEPNRA 179 >gi|313891748|ref|ZP_07825353.1| putative DNA repair protein RadC [Dialister microaerophilus UPII 345-E] gi|313119742|gb|EFR42929.1| putative DNA repair protein RadC [Dialister microaerophilus UPII 345-E] Length = 176 Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D H I SRGT++ ++ R+I QR + ++A +I L HNHPSG+ PSD D + Sbjct: 54 DCHMKPIGVFELSRGTLNQGIMHARDIFQRAIMVNAYAIFLAHNHPSGDSTPSDMDDILY 113 Query: 64 QNIITTLNPLNIIVHD-HIIIGKDAFVSFKGL 94 + + I + D ++I+ ++ + S Sbjct: 114 LQLKEDGIRMGIPIKDSYVIVDENNYTSIPEH 145 >gi|221235766|ref|YP_002518203.1| DNA repair protein RadC [Caulobacter crescentus NA1000] gi|220964939|gb|ACL96295.1| DNA repair protein radC [Caulobacter crescentus NA1000] Length = 56 Score = 74.7 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 26/56 (46%), Positives = 39/56 (69%) Query: 42 IILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++ +HNHPSG+P PS DI+MT+ I+ L I VHDH+++G+D SFK L ++ Sbjct: 1 MLFMHNHPSGDPTPSRPDIDMTKQIVEAGKALKIAVHDHLVVGRDGVASFKALGLM 56 >gi|329121118|ref|ZP_08249749.1| DNA repair protein RadC [Dialister micraerophilus DSM 19965] gi|327471280|gb|EGF16734.1| DNA repair protein RadC [Dialister micraerophilus DSM 19965] Length = 176 Score = 73.9 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D H I SRGT++ ++ R+I QR + ++A +I L HNHP G+ PSD D + Sbjct: 54 DCHMKPIGVFELSRGTLNQGIMHARDIFQRAIMVNAYAIFLAHNHPGGDSTPSDMDDILY 113 Query: 64 QNIITTLNPLNIIVHD-HIIIGKDAFVSFKGL 94 + + I + D ++I+ ++ + S Sbjct: 114 LQLKEDGIRMGIPIKDSYVIVDRNNYTSIPEH 145 >gi|171464047|ref|YP_001798160.1| DNA repair protein RadC [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193585|gb|ACB44546.1| DNA repair protein RadC [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 59 Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 33/54 (61%) Query: 44 LVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + HNHPSGNP PSDAD +T+ ++ L ++I + DH I+ F SF ++ Sbjct: 1 MAHNHPSGNPLPSDADQELTKVLVNALQLVDIQLLDHCIVSGSGFFSFSDSGLM 54 >gi|56552322|ref|YP_163161.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4] gi|241761621|ref|ZP_04759708.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753987|ref|YP_003226880.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56543896|gb|AAV90050.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4] gi|241373929|gb|EER63462.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553350|gb|ACV76296.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 141 Score = 73.5 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 40/76 (52%) Query: 22 HVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHI 81 + IR I++ + LSA S+IL HNHPSG+P PS D + T+ + I + DH+ Sbjct: 66 ASYLDIRNILRHAIILSADSLILAHNHPSGDPTPSYMDRDTTKRLALVTRMAGIKLLDHL 125 Query: 82 IIGKDAFVSFKGLRII 97 I SF + ++ Sbjct: 126 IFANKKCQSFHSIGLL 141 >gi|167647805|ref|YP_001685468.1| DNA repair protein RadC [Caulobacter sp. K31] gi|167350235|gb|ABZ72970.1| DNA repair protein RadC [Caulobacter sp. K31] Length = 53 Score = 72.8 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 25/52 (48%), Positives = 36/52 (69%) Query: 45 VHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 +HNHPSG+P PS DI+MT+ I+ L I VHDH+++G++ SFK L + Sbjct: 1 MHNHPSGDPTPSRPDIDMTKQIVEAGKALKINVHDHLVVGREGVASFKALGL 52 >gi|13471142|ref|NP_102711.1| DNA repair protein [Mesorhizobium loti MAFF303099] gi|14021886|dbj|BAB48497.1| probable DNA repair protein [Mesorhizobium loti MAFF303099] Length = 66 Score = 72.4 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 32/54 (59%), Positives = 38/54 (70%) Query: 44 LVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 L+HNHPSG+P PS ADI MT+ II L I VHDHIIIG+ + S KGL +I Sbjct: 13 LMHNHPSGDPTPSRADIEMTKEIIEAGKRLGIAVHDHIIIGRKGYASMKGLLLI 66 >gi|218905656|ref|YP_002453490.1| DNA repair protein [Bacillus cereus AH820] gi|218538266|gb|ACK90664.1| DNA repair protein [Bacillus cereus AH820] Length = 186 Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 32/53 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53 L+L+ N +I + G+++ V+ RE+ + +A SII +HNHPSG+P Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDP 181 >gi|209886704|ref|YP_002290561.1| DNA repair protein RadC [Oligotropha carboxidovorans OM5] gi|209874900|gb|ACI94696.1| DNA repair protein RadC [Oligotropha carboxidovorans OM5] Length = 205 Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 37/52 (71%), Positives = 44/52 (84%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52 LFLDK N LIADE+Q GT+DH PVY RE+V+R LELSAT+IILVHNHP+ + Sbjct: 143 LFLDKRNQLIADELQQVGTVDHTPVYPREVVKRALELSATAIILVHNHPTSS 194 >gi|148975028|ref|ZP_01812008.1| DNA repair protein RadC [Vibrionales bacterium SWAT-3] gi|145965537|gb|EDK30786.1| DNA repair protein RadC [Vibrionales bacterium SWAT-3] Length = 128 Score = 71.6 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 LFLD + ++ + GT++ VY RE+V+ L +A+++IL HNHPSG P A + Sbjct: 65 LFLDNQHRVLRTQEMFYGTVNAASVYPREVVKASLVTNASAVILYHNHPSGA--PRSAYV 122 Query: 61 NM 62 Sbjct: 123 KR 124 >gi|23099511|ref|NP_692977.1| DNA repair protein [Oceanobacillus iheyensis HTE831] gi|22777740|dbj|BAC14012.1| DNA repair protein (RadC family) [Oceanobacillus iheyensis HTE831] Length = 191 Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 32/51 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51 LFL+ N +I + G+++ V+ RE+ + ++ SA S+I+ HNHPSG Sbjct: 133 LFLNTKNQIIHYQTVFIGSLNASIVHPREVFKEAVKRSAASLIVAHNHPSG 183 >gi|154246981|ref|YP_001417939.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2] gi|154161066|gb|ABS68282.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2] Length = 209 Score = 71.2 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 33/50 (66%), Positives = 42/50 (84%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50 LFLDK N LIADEV GT+DH PVY RE+V+R LE+SA+++IL+HNHP+ Sbjct: 138 LFLDKRNQLIADEVLQTGTVDHAPVYPREVVKRALEVSASAVILLHNHPT 187 >gi|299132649|ref|ZP_07025844.1| DNA repair protein RadC [Afipia sp. 1NLS2] gi|298592786|gb|EFI52986.1| DNA repair protein RadC [Afipia sp. 1NLS2] Length = 205 Score = 71.2 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 37/50 (74%), Positives = 43/50 (86%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50 LFLDK N LIADE+Q GT+DH PVY RE+V+R LELSAT+IILVHNHP+ Sbjct: 143 LFLDKRNQLIADELQQVGTVDHTPVYPREVVKRALELSATAIILVHNHPT 192 >gi|148258571|ref|YP_001243156.1| DNA repair protein RadC [Bradyrhizobium sp. BTAi1] gi|146410744|gb|ABQ39250.1| DNA repair protein RadC [Bradyrhizobium sp. BTAi1] Length = 203 Score = 70.9 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 37/50 (74%), Positives = 43/50 (86%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50 LFLDK N LIADEVQ GT+DH PVY RE+++R LELSAT+IILVHNHP+ Sbjct: 141 LFLDKRNQLIADEVQQTGTVDHTPVYPREVIKRALELSATAIILVHNHPT 190 >gi|205374326|ref|ZP_03227124.1| DNA repair protein RadC [Bacillus coahuilensis m4-4] Length = 59 Score = 70.5 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 43 ILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 I + P +P PS DI +T+ ++ + I V DH+IIG+ +VS K I Sbjct: 6 IFLAFLP-NDPTPSREDIEVTKRLVECGKIIGIEVLDHLIIGEKKYVSLKEKGYI 59 >gi|5825428|gb|AAD53243.1|AF124649_1 DNA repair protein RadC [Enterococcus faecalis] Length = 103 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 34/55 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNP 55 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSGNP P Sbjct: 49 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTP 103 >gi|56459747|ref|YP_155028.1| RadC family protein [Idiomarina loihiensis L2TR] gi|56178757|gb|AAV81479.1| RadC family protein [Idiomarina loihiensis L2TR] Length = 152 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L LD + LI + G + + + L+++A ++I+ + PS N SD + Sbjct: 62 LLLDSQHRLIDNVEFEEGE----ELAASMVYREVLKVNAAAVIVSYFSPSKELNHSDKEH 117 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++ + + LN +++ + D +++ VS ++ Sbjct: 118 ELS-TLKSALNLIDVSLLDCMLVTD-EVVSLAERGLL 152 >gi|67459702|ref|YP_247326.1| DNA repair protein RadC [Rickettsia felis URRWXCal2] gi|67005235|gb|AAY62161.1| DNA repair protein RadC [Rickettsia felis URRWXCal2] Length = 155 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 36/54 (66%), Positives = 42/54 (77%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPN 54 LFL+K NILIADEV S+GTID VY REI++R L A+S+ILVHNHPSG N Sbjct: 95 LFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASSLILVHNHPSGALN 148 >gi|26989216|ref|NP_744641.1| RadC family protein [Pseudomonas putida KT2440] gi|24984058|gb|AAN68105.1|AE016442_6 RadC family protein [Pseudomonas putida KT2440] Length = 182 Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 24/51 (47%), Positives = 32/51 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51 L LD + +I RGT+D VY RE+V+ LE +A + +LVHNHPSG Sbjct: 69 LLLDSRHRVIVFHELFRGTLDSASVYPREVVKTALEHNAAATVLVHNHPSG 119 >gi|27383284|ref|NP_774813.1| DNA repair protein [Bradyrhizobium japonicum USDA 110] gi|27356458|dbj|BAC53438.1| radC [Bradyrhizobium japonicum USDA 110] Length = 206 Score = 70.1 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 37/56 (66%), Positives = 46/56 (82%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPS 56 LFLDK N LIADEVQ GT+DH PVY RE+++R LELSAT++ILVHNHP+ +P + Sbjct: 144 LFLDKRNQLIADEVQQTGTVDHTPVYPREVIKRALELSATALILVHNHPTTHPMIT 199 >gi|298292919|ref|YP_003694858.1| DNA repair protein RadC [Starkeya novella DSM 506] gi|296929430|gb|ADH90239.1| DNA repair protein RadC [Starkeya novella DSM 506] Length = 217 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 34/50 (68%), Positives = 43/50 (86%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50 LFLDK N LI DEVQ RGT+DH PVY RE+V+R LE++A+++ILVHNHP+ Sbjct: 155 LFLDKRNQLILDEVQQRGTVDHTPVYPREVVKRALEVAASAVILVHNHPT 204 >gi|209883200|ref|YP_002287057.1| hypothetical protein OCAR_4040 [Oligotropha carboxidovorans OM5] gi|209871396|gb|ACI91192.1| conserved domain protein [Oligotropha carboxidovorans OM5] Length = 65 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 43/63 (68%) Query: 35 LELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 + + L+HNHPSG+P PS ADI MT++I+ PL I VHDHII+GK+ S KG+ Sbjct: 3 YLCFSMASKLMHNHPSGDPTPSQADIQMTKSIVAISAPLGISVHDHIIVGKNGHSSLKGM 62 Query: 95 RII 97 R++ Sbjct: 63 RLM 65 >gi|325278816|ref|YP_004251358.1| DNA repair protein RadC [Odoribacter splanchnicus DSM 20712] gi|324310625|gb|ADY31178.1| DNA repair protein RadC [Odoribacter splanchnicus DSM 20712] Length = 148 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 49/97 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 + L ++ ++ S + V + I+Q + +A SII+V N PSG+ P+DA+ Sbjct: 52 ILLSGNSTVLGVMTVSESAHTYDIVETKFILQAAILANAKSIIVVSNSPSGDLEPNDAEK 111 Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++ I +I + D+++I + + SF +++ Sbjct: 112 DLKNQIKLAAYLFDIELADYLLINNEDYYSFADNKVL 148 >gi|254931489|ref|ZP_05264848.1| DNA repair protein RadC [Listeria monocytogenes HPB2262] gi|293583041|gb|EFF95073.1| DNA repair protein RadC [Listeria monocytogenes HPB2262] Length = 185 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 31/53 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53 LFL+ N +I + G ++ V+ RE+ + L SA SI+ HNHPSG+P Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDP 180 >gi|162455783|ref|YP_001618150.1| DNA repair protein [Sorangium cellulosum 'So ce 56'] gi|161166365|emb|CAN97670.1| DNA repair protein [Sorangium cellulosum 'So ce 56'] Length = 156 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 42/79 (53%) Query: 11 ADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTL 70 A + +RG+ D + V +++ L+++A S +L HNHPSG+P P+ D MT + Sbjct: 73 ARRLLARGSDDALHVGRSTVLRTALDMAAHSFVLAHNHPSGDPTPTREDEAMTLELRHLS 132 Query: 71 NPLNIIVHDHIIIGKDAFV 89 L++ + H+I+ Sbjct: 133 AELHVPLTAHVIVTPSGRY 151 >gi|116328705|ref|YP_798425.1| DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330637|ref|YP_800355.1| DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121449|gb|ABJ79492.1| DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124326|gb|ABJ75597.1| DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 232 Score = 69.7 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 47/84 (55%) Query: 9 LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68 ++ E+ + G+++ V V R++++ L +A+S+I+ HNHP + PS D+ + +N Sbjct: 138 VLRAEIVAVGSLEEVGVQTRDLLKIILNDAASSVIIAHNHPESSSKPSKEDLWIFENFGR 197 Query: 69 TLNPLNIIVHDHIIIGKDAFVSFK 92 L+ + + + D I G D S K Sbjct: 198 LLDMIGLELLDQWIFGIDGIYSCK 221 >gi|167647755|ref|YP_001685418.1| DNA repair protein RadC [Caulobacter sp. K31] gi|167350185|gb|ABZ72920.1| DNA repair protein RadC [Caulobacter sp. K31] Length = 196 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 32/50 (64%), Positives = 42/50 (84%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50 LFLD N LIADEV + GT+DH PVY RE+++R LELS+++IIL+HNHP+ Sbjct: 134 LFLDNKNQLIADEVMNHGTVDHAPVYPREVMRRALELSSSNIILLHNHPT 183 >gi|120435587|ref|YP_861273.1| DNA repair protein RadC domain-containing protein [Gramella forsetii KT0803] gi|117577737|emb|CAL66206.1| protein containing domain of DNA repair protein RadC [Gramella forsetii KT0803] Length = 57 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 45 VHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97 HNHPSG PS+ D +T+ I L+I + DH+I+ + SF I+ Sbjct: 4 AHNHPSGTLKPSETDKRLTEKIRKAGELLDIKILDHLILTPDGDYFSFADSGIL 57 >gi|154244743|ref|YP_001415701.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2] gi|154158828|gb|ABS66044.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2] Length = 128 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 29/50 (58%), Positives = 42/50 (84%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50 L+LD+ N LI+DE + GTIDHVPVY RE+++R L L+A+++I+VHNHP+ Sbjct: 66 LYLDRKNRLISDECLAIGTIDHVPVYPREVLRRSLALNASALIIVHNHPT 115 >gi|221235698|ref|YP_002518135.1| DNA repair protein RadC [Caulobacter crescentus NA1000] gi|220964871|gb|ACL96227.1| DNA repair protein radC [Caulobacter crescentus NA1000] Length = 221 Score = 68.9 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 33/50 (66%), Positives = 44/50 (88%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50 LFLDK N LIADEV +RGT+DH PVY RE+++R LELS+++II++HNHP+ Sbjct: 161 LFLDKKNQLIADEVLNRGTVDHAPVYPREVMRRALELSSSNIIILHNHPT 210 >gi|13471076|ref|NP_102645.1| DNA repair protein RadC [Mesorhizobium loti MAFF303099] gi|14021820|dbj|BAB48431.1| DNA repair protein; RadC [Mesorhizobium loti MAFF303099] Length = 179 Score = 68.5 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 38/50 (76%), Positives = 43/50 (86%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50 LFLDK N LIADEVQ GT+DH PVY RE+V+R LELSAT+IILVHNHP+ Sbjct: 117 LFLDKKNALIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPT 166 >gi|205374328|ref|ZP_03227126.1| DNA repair protein RadC [Bacillus coahuilensis m4-4] Length = 190 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 30/51 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51 L+L+ N +I + G+++ V+ RE+ + SA SII +HNHPSG Sbjct: 132 LYLNTKNQVIHKQTIFIGSLNASIVHPREVYKEAFRRSAASIICIHNHPSG 182 >gi|27375189|ref|NP_766718.1| hypothetical protein bsr0078 [Bradyrhizobium japonicum USDA 110] gi|27348325|dbj|BAC45343.1| bsr0078 [Bradyrhizobium japonicum USDA 110] Length = 53 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 31/53 (58%), Positives = 40/53 (75%) Query: 45 VHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +HNHPSG+P+PS ADI MT+ II PL I VHDHII+GK+ S KG+++I Sbjct: 1 MHNHPSGDPSPSQADIQMTKAIIDIARPLGIAVHDHIIVGKNGHSSLKGMKLI 53 >gi|152976871|ref|YP_001376388.1| DNA repair protein RadC [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025623|gb|ABS23393.1| DNA repair protein RadC [Bacillus cytotoxicus NVH 391-98] Length = 185 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 30/51 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51 L+L+ N ++ + G+++ V+ RE+ + +A SII +HNHPSG Sbjct: 129 LYLNTKNQVMHRQTVFIGSLNASIVHPREVFKEAFRRAAASIICLHNHPSG 179 >gi|24214156|ref|NP_711637.1| DNA repair protein RadC [Leptospira interrogans serovar Lai str. 56601] gi|45658145|ref|YP_002231.1| DNA repair protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24195053|gb|AAN48655.1| DNA repair protein RadC [Leptospira interrogans serovar Lai str. 56601] gi|45601387|gb|AAS70868.1| DNA repair protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 232 Score = 68.5 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 47/84 (55%) Query: 9 LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68 ++ EV + G+++ V V R++++ L +A+++I+ HNHP + PS D+ + +N + Sbjct: 138 VLRAEVVAVGSLEEVGVQTRDLLKIILNDAASAVIIAHNHPESSSKPSKEDLWIYKNFGS 197 Query: 69 TLNPLNIIVHDHIIIGKDAFVSFK 92 L + + + D I G D S K Sbjct: 198 LLANIGLELLDQWIFGIDGIYSCK 221 >gi|58699143|ref|ZP_00373968.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of Drosophila ananassae] gi|58534343|gb|EAL58517.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of Drosophila ananassae] Length = 197 Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 1/76 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+K LI +E G ++ PVYI+EI ++ L +ATSII+ HNHP G+ PS+ D Sbjct: 123 LYLNKRRQLIGEES-YIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSEEDQ 181 Query: 61 NMTQNIITTLNPLNII 76 +T+++ + +++ Sbjct: 182 AVTKSLAAACSTVSVK 197 >gi|23010157|ref|ZP_00050945.1| COG2003: DNA repair proteins [Magnetospirillum magnetotacticum MS-1] Length = 208 Score = 68.2 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 35/50 (70%), Positives = 42/50 (84%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50 LFLD+ N LIADEVQ RGT+DH PVY RE+ +R LELS+T+IIL HNHP+ Sbjct: 149 LFLDRRNHLIADEVQGRGTVDHTPVYTREVARRALELSSTAIILAHNHPT 198 >gi|52425996|ref|YP_089133.1| RadC protein [Mannheimia succiniciproducens MBEL55E] gi|52308048|gb|AAU38548.1| RadC protein [Mannheimia succiniciproducens MBEL55E] Length = 111 Score = 67.8 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 32/54 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPN 54 LFLD + LI E GTI+ ++ REI++ L +A ++IL HNH +PN Sbjct: 41 LFLDNQHRLIKQEEMFLGTINSAVIHPREIIKTALYCNAAAMILAHNHLRESPN 94 >gi|294617319|ref|ZP_06696959.1| DNA repair protein RadC [Enterococcus faecium E1679] gi|291596428|gb|EFF27681.1| DNA repair protein RadC [Enterococcus faecium E1679] Length = 187 Score = 67.8 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52 ++LD N +I + G+++ + REI + A I+L HNHPSGN Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGN 182 >gi|121591820|ref|ZP_01679006.1| DNA repair protein RadC [Vibrio cholerae 2740-80] gi|121546316|gb|EAX56595.1| DNA repair protein RadC [Vibrio cholerae 2740-80] Length = 169 Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 19/42 (45%), Positives = 27/42 (64%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSI 42 LFLD + +I DE+ GTID VY RE+V+R L +A ++ Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAV 169 >gi|309809938|ref|ZP_07703786.1| DNA repair protein RadC family protein [Lactobacillus iners SPIN 2503V10-D] gi|325913050|ref|ZP_08175423.1| DNA repair protein RadC family protein [Lactobacillus iners UPII 60-B] gi|308169726|gb|EFO71771.1| DNA repair protein RadC family protein [Lactobacillus iners SPIN 2503V10-D] gi|325477730|gb|EGC80869.1| DNA repair protein RadC family protein [Lactobacillus iners UPII 60-B] Length = 60 Score = 67.4 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 30/53 (56%) Query: 45 VHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 HNHPS + PS+ DI +T+ I + + I DH I+ ++SFK + ++ Sbjct: 8 SHNHPSEDLTPSEQDIQVTKKISSVSECMGIRFLDHFIVNTGNYLSFKEMELL 60 >gi|268610725|ref|ZP_06144452.1| DNA repair protein RadC [Ruminococcus flavefaciens FD-1] Length = 228 Score = 67.0 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 41/91 (45%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D+ + + + V R+I + A I + HNHP GN +PS DI T Sbjct: 123 DRTFRITSTHTIYSDSPLEVKALSRDIADFVITSKADRIFIAHNHPIGNASPSAGDIMST 182 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94 II L+ L + DHIIIGK+ S + Sbjct: 183 DKIIAALSKLGTALIDHIIIGKNGAYSMRDQ 213 >gi|58040814|ref|YP_192778.1| DNA repair protein RadC [Gluconobacter oxydans 621H] gi|58003228|gb|AAW62122.1| DNA repair protein RadC [Gluconobacter oxydans 621H] Length = 229 Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 7/98 (7%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+LD N L+ADE D + R I R L L AT++I H P AD+ Sbjct: 138 LYLDNRNRLLADEAAPE--ADSLAERNRAIAIRALALHATALIGFHIRPKE----RPADL 191 Query: 61 -NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 + + + PL+I +HD +I + S + ++ Sbjct: 192 SQSARQLDFAMRPLSITLHDVLITNEGRPSSLRQEGLL 229 >gi|307290160|ref|ZP_07570079.1| putative DNA repair protein RadC [Enterococcus faecalis TX0411] gi|312902611|ref|ZP_07761816.1| putative DNA repair protein RadC [Enterococcus faecalis TX0635] gi|306498788|gb|EFM68286.1| putative DNA repair protein RadC [Enterococcus faecalis TX0411] gi|310633949|gb|EFQ17232.1| putative DNA repair protein RadC [Enterococcus faecalis TX0635] gi|315145982|gb|EFT89998.1| putative DNA repair protein RadC [Enterococcus faecalis TX2141] gi|315578970|gb|EFU91161.1| putative DNA repair protein RadC [Enterococcus faecalis TX0630] Length = 191 Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 31/51 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSG Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSG 191 >gi|256962798|ref|ZP_05566969.1| DNA repair protein RadC [Enterococcus faecalis HIP11704] gi|256953294|gb|EEU69926.1| DNA repair protein RadC [Enterococcus faecalis HIP11704] Length = 196 Score = 66.6 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 31/51 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51 ++L+ N +I + +G+++ + REI + ++ S+ I+L HNHPSG Sbjct: 146 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSG 196 >gi|257879529|ref|ZP_05659182.1| DNA repair protein RadC [Enterococcus faecium 1,230,933] gi|257883463|ref|ZP_05663116.1| DNA repair protein RadC [Enterococcus faecium 1,231,502] gi|257894826|ref|ZP_05674479.1| DNA repair protein RadC [Enterococcus faecium 1,231,408] gi|261209045|ref|ZP_05923449.1| DNA repair protein RadC [Enterococcus faecium TC 6] gi|289566560|ref|ZP_06446982.1| DNA repair protein RadC [Enterococcus faecium D344SRF] gi|257813757|gb|EEV42515.1| DNA repair protein RadC [Enterococcus faecium 1,230,933] gi|257819121|gb|EEV46449.1| DNA repair protein RadC [Enterococcus faecium 1,231,502] gi|257831205|gb|EEV57812.1| DNA repair protein RadC [Enterococcus faecium 1,231,408] gi|260076957|gb|EEW64680.1| DNA repair protein RadC [Enterococcus faecium TC 6] gi|289161659|gb|EFD09537.1| DNA repair protein RadC [Enterococcus faecium D344SRF] Length = 223 Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 27/51 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51 ++LD N +I + G+++ + REI + A I+L HNHPSG Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSG 181 >gi|221142588|ref|ZP_03567081.1| DNA repair protein RadC-like protein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|304380747|ref|ZP_07363416.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304340746|gb|EFM06677.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 179 Score = 66.2 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 32/52 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGD 179 >gi|254796614|ref|YP_003081450.1| DNA repair protein RadC, truncated [Neorickettsia risticii str. Illinois] gi|254589842|gb|ACT69204.1| DNA repair protein RadC, truncated [Neorickettsia risticii str. Illinois] Length = 56 Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 30/56 (53%) Query: 42 IILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +++ HNHPSGNP PS D+ +T + +++ + DH I+ SF ++ Sbjct: 1 MVIAHNHPSGNPLPSQEDLLLTGKLKKICQKVDVQLVDHFIVTPHDHFSFVVNGLL 56 >gi|262052235|ref|ZP_06024440.1| hypothetical protein SA930_0195 [Staphylococcus aureus 930918-3] gi|259159836|gb|EEW44875.1| hypothetical protein SA930_0195 [Staphylococcus aureus 930918-3] Length = 180 Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 32/52 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGD 179 >gi|257431077|ref|ZP_05607454.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 68-397] gi|257278025|gb|EEV08673.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 68-397] Length = 180 Score = 66.2 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 32/52 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGD 179 >gi|94310183|ref|YP_583393.1| DNA repair protein RadC [Cupriavidus metallidurans CH34] Length = 138 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 29/49 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHP 49 LFLD + LI GTID V+ RE+V++ L L+A ++I+ H P Sbjct: 72 LFLDTRHRLIDYVEMFHGTIDAAEVHPREVVKQALRLNAAAVIVAHYVP 120 >gi|229158070|ref|ZP_04286140.1| DNA repair protein radC [Bacillus cereus ATCC 4342] gi|228625389|gb|EEK82146.1| DNA repair protein radC [Bacillus cereus ATCC 4342] Length = 51 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/48 (43%), Positives = 27/48 (56%) Query: 50 SGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 SG+P PS DI +T+ ++ + I V DHIIIG FVS K I Sbjct: 4 SGDPAPSREDIEVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 51 >gi|163786468|ref|ZP_02180916.1| putative DNA repair protein [Flavobacteriales bacterium ALC-1] gi|159878328|gb|EDP72384.1| putative DNA repair protein [Flavobacteriales bacterium ALC-1] Length = 110 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Query: 28 REIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDA 87 + I + + ++IL HNHPSGN PS +DI++T+ ++ N L++ + DH+I+ Sbjct: 38 QHIFKT-KKTRTCTLILGHNHPSGNLKPSQSDISLTKRLVQDANYLDLKILDHLILTDTT 96 Query: 88 FVSFKGLRII 97 + SF I Sbjct: 97 YTSFADDNTI 106 >gi|258438230|ref|ZP_05689514.1| DNA repair protein RadC [Staphylococcus aureus A9299] gi|257848274|gb|EEV72265.1| DNA repair protein RadC [Staphylococcus aureus A9299] Length = 185 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 32/52 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGD 179 >gi|15924650|ref|NP_372184.1| DNA repair protein RadC-like protein [Staphylococcus aureus subsp. aureus Mu50] gi|15927239|ref|NP_374772.1| hypothetical protein SA1485 [Staphylococcus aureus subsp. aureus N315] gi|148268141|ref|YP_001247084.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH9] gi|150394208|ref|YP_001316883.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH1] gi|156979978|ref|YP_001442237.1| DNA repair protein RadC-like protein [Staphylococcus aureus subsp. aureus Mu3] gi|255006446|ref|ZP_05145047.2| DNA repair protein RadC-like protein [Staphylococcus aureus subsp. aureus Mu50-omega] gi|295405972|ref|ZP_06815780.1| DNA repair protein RadC [Staphylococcus aureus A8819] gi|297245102|ref|ZP_06928979.1| DNA repair protein RadC [Staphylococcus aureus A8796] gi|13701457|dbj|BAB42751.1| truncated(radC) [Staphylococcus aureus subsp. aureus N315] gi|14247432|dbj|BAB57822.1| DNA repair protein RadC homolog [Staphylococcus aureus subsp. aureus Mu50] gi|147741210|gb|ABQ49508.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH9] gi|149946660|gb|ABR52596.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH1] gi|156722113|dbj|BAF78530.1| DNA repair protein RadC homolog [Staphylococcus aureus subsp. aureus Mu3] gi|285817343|gb|ADC37830.1| truncated DNA repair protein RadC [Staphylococcus aureus 04-02981] gi|294968969|gb|EFG44990.1| DNA repair protein RadC [Staphylococcus aureus A8819] gi|297178182|gb|EFH37430.1| DNA repair protein RadC [Staphylococcus aureus A8796] gi|302751487|gb|ADL65664.1| putative DNA repair protein, RadC [Staphylococcus aureus subsp. aureus str. JKD6008] gi|329314334|gb|AEB88747.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus T0131] gi|329727700|gb|EGG64156.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 21172] Length = 184 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 32/52 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGD 179 >gi|257428443|ref|ZP_05604841.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 65-1322] gi|293503536|ref|ZP_06667383.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 58-424] gi|257275284|gb|EEV06771.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 65-1322] gi|291095202|gb|EFE25467.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 58-424] Length = 184 Score = 65.8 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 32/52 (61%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG+ Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGD 179 >gi|317057607|ref|YP_004106074.1| DNA repair protein RadC [Ruminococcus albus 7] gi|315449876|gb|ADU23440.1| DNA repair protein RadC [Ruminococcus albus 7] Length = 229 Score = 65.5 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 1/93 (1%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 +K L A V S G D + + E+ +IL HNHP + PSD D+ T Sbjct: 133 NKAGRLTASAVLSAGITDRIAFDVDELKSFIALNCTDILILAHNHPGNSAIPSDEDVIFT 192 Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 + + L+ + DH+I+ + S + L Sbjct: 193 RKLRNLLDD-QVCFLDHLIVTNNEVTSMRALGF 224 >gi|323952514|gb|EGB48387.1| RadC family protein DNA repair protein [Escherichia coli H252] Length = 111 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 28/45 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILV 45 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLA 111 >gi|258415751|ref|ZP_05682022.1| DNA repair protein RadC [Staphylococcus aureus A9763] gi|258422012|ref|ZP_05684932.1| DNA repair protein RadC [Staphylococcus aureus A9719] gi|258444926|ref|ZP_05693246.1| DNA repair protein RadC [Staphylococcus aureus A6300] gi|258447980|ref|ZP_05696112.1| DNA repair protein RadC [Staphylococcus aureus A6224] gi|258451824|ref|ZP_05699846.1| DNA repair protein RadC [Staphylococcus aureus A5948] gi|258454312|ref|ZP_05702281.1| DNA repair protein RadC [Staphylococcus aureus A5937] gi|282929335|ref|ZP_06336902.1| DNA repair protein radC [Staphylococcus aureus A10102] gi|257839344|gb|EEV63817.1| DNA repair protein RadC [Staphylococcus aureus A9763] gi|257842056|gb|EEV66485.1| DNA repair protein RadC [Staphylococcus aureus A9719] gi|257856134|gb|EEV79049.1| DNA repair protein RadC [Staphylococcus aureus A6300] gi|257858741|gb|EEV81612.1| DNA repair protein RadC [Staphylococcus aureus A6224] gi|257860536|gb|EEV83362.1| DNA repair protein RadC [Staphylococcus aureus A5948] gi|257863542|gb|EEV86301.1| DNA repair protein RadC [Staphylococcus aureus A5937] gi|282589067|gb|EFB94168.1| DNA repair protein radC [Staphylococcus aureus A10102] gi|315130708|gb|EFT86694.1| hypothetical protein CGSSa03_10705 [Staphylococcus aureus subsp. aureus CGS03] Length = 178 Score = 65.1 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 31/51 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSG 178 >gi|257794047|ref|ZP_05643026.1| DNA repair protein RadC [Staphylococcus aureus A9781] gi|257788019|gb|EEV26359.1| DNA repair protein RadC [Staphylococcus aureus A9781] Length = 173 Score = 65.1 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 31/51 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51 L L+ N++I + +GT++ V+ REI + +A +II VHNHPSG Sbjct: 123 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSG 173 >gi|295428233|ref|ZP_06820862.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus EMRSA16] gi|295127633|gb|EFG57270.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus EMRSA16] gi|315195564|gb|EFU25951.1| hypothetical protein CGSSa00_07855 [Staphylococcus aureus subsp. aureus CGS00] Length = 184 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 31/52 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52 L L+ N++I + +GT++ V+ RE + +A +II VHNHPSG+ Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREFFSIAVRENANAIIAVHNHPSGD 179 >gi|261226450|ref|ZP_05940731.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. FRIK2000] gi|261256435|ref|ZP_05948968.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. FRIK966] Length = 106 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 28/45 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILV 45 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLA 106 >gi|229158072|ref|ZP_04286142.1| DNA repair protein radC [Bacillus cereus ATCC 4342] gi|228625391|gb|EEK82148.1| DNA repair protein radC [Bacillus cereus ATCC 4342] Length = 181 Score = 64.7 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNH 48 L+L+ N +I + G+++ V+ RE+ + +A SII +HNH Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNH 176 >gi|85713468|ref|ZP_01044458.1| DNA repair protein RadC [Nitrobacter sp. Nb-311A] gi|85699372|gb|EAQ37239.1| DNA repair protein RadC [Nitrobacter sp. Nb-311A] Length = 53 Score = 64.7 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 32/53 (60%), Positives = 41/53 (77%) Query: 45 VHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +HN+PSG+P PS ADI MT++II +PL I VHDHII+GK+ S KGLR+I Sbjct: 1 MHNYPSGDPTPSQADIQMTRSIIDISSPLGISVHDHIIVGKNGHASLKGLRLI 53 >gi|261226382|ref|ZP_05940663.1| putative DNA repair protein, RADC family [Escherichia coli O157:H7 str. FRIK2000] gi|261256423|ref|ZP_05948956.1| hypothetical protein EscherichiacoliO157EcO_11384 [Escherichia coli O157:H7 str. FRIK966] Length = 106 Score = 64.3 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 28/45 (62%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILV 45 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLA 106 >gi|331683578|ref|ZP_08384177.1| putative DNA repair protein [Escherichia coli H299] gi|331079199|gb|EGI50398.1| putative DNA repair protein [Escherichia coli H299] Length = 110 Score = 64.3 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 28/44 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIIL 44 L+L+ N LIA E GTI+ V+ RE+++R L +A +++L Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVL 110 >gi|154244682|ref|YP_001415640.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2] gi|154158767|gb|ABS65983.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2] Length = 70 Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 30/54 (55%) Query: 44 LVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 +VHNHP+G+P PS AD+ MT I L + +HDHII G S + I Sbjct: 17 IVHNHPAGDPEPSAADLAMTMEIQKACAALGMTLHDHIITGAGRETSLRARGEI 70 >gi|229048171|ref|ZP_04193740.1| DNA repair protein radC [Bacillus cereus AH676] gi|228723158|gb|EEL74534.1| DNA repair protein radC [Bacillus cereus AH676] Length = 184 Score = 63.9 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNH 48 L+L+ N +I + G+++ V+ RE+ + +A SII +HNH Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNH 176 >gi|325272067|ref|ZP_08138503.1| hypothetical protein G1E_04282 [Pseudomonas sp. TJI-51] gi|324102763|gb|EGC00174.1| hypothetical protein G1E_04282 [Pseudomonas sp. TJI-51] Length = 167 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 21/44 (47%), Positives = 29/44 (65%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIIL 44 LFLD + +A E+ RGTID VY RE+V+R L +A ++IL Sbjct: 112 LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALLHNAAALIL 155 >gi|196044826|ref|ZP_03112060.1| DNA repair protein [Bacillus cereus 03BB108] gi|196024314|gb|EDX62987.1| DNA repair protein [Bacillus cereus 03BB108] Length = 192 Score = 63.1 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 26/48 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNH 48 L+L+ N +I + G+++ V+ RE+ + +A SII +HN Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNQ 176 >gi|3248969|gb|AAD09944.1| unknown [Coxiella burnetii] Length = 142 Score = 62.8 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 15/82 (18%) Query: 19 TIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT---QN-----IITTL 70 + + V+ REI++R L ++ ++I+ HNHPSG P+PS AD T Q I Sbjct: 55 SFNQASVHPREIIKRALYHNSAALIVAHNHPSGVPDPSQADRAATNPSQRKLSPWIRRAA 114 Query: 71 NPLNIIVHDHIIIGKDAF-VSF 91 +NI IIG SF Sbjct: 115 CSINI------IIGGSEIRFSF 130 >gi|329113314|ref|ZP_08242095.1| DNA repair protein RadC [Acetobacter pomorum DM001] gi|326697139|gb|EGE48799.1| DNA repair protein RadC [Acetobacter pomorum DM001] Length = 274 Score = 62.8 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 10/101 (9%) Query: 1 LFLDKHNILIADEV----QSRGTIDHVPVYIRE----IVQRCLELSATSIILVH--NHPS 50 LFLD N LIADE G+ IR+ ++QR L L A +++ V Sbjct: 166 LFLDSRNQLIADETVPAFLHEGSSHEAMACIRQAVALVLQRALALHACALVTVDLVAENQ 225 Query: 51 GNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91 + + + + L + VHDHI IG + SF Sbjct: 226 TLDQSLAQNAPFVRELQRSAPLLAVEVHDHITIGWGEWRSF 266 >gi|83311181|ref|YP_421445.1| DNA repair protein [Magnetospirillum magneticum AMB-1] gi|82946022|dbj|BAE50886.1| DNA repair protein [Magnetospirillum magneticum AMB-1] Length = 110 Score = 62.0 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 30/48 (62%), Positives = 38/48 (79%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNH 48 LFLD+ N LIADEVQ GT+DH P+Y RE+V+R L L A++II+VHN Sbjct: 52 LFLDRKNTLIADEVQQTGTVDHTPLYPREVVKRALALHASAIIMVHNR 99 >gi|221142289|ref|ZP_03566782.1| hypothetical protein SauraJ_11752 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|304380031|ref|ZP_07362754.1| RadC domain protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|14020981|dbj|BAB47605.1| hypothetical protein [Staphylococcus aureus] gi|169403107|emb|CAP17708.1| hypothetical protein [Staphylococcus pseudintermedius] gi|269939604|emb|CBI47970.1| DNA repair protein RadC (fragment) [Staphylococcus aureus subsp. aureus TW20] gi|295443921|dbj|BAJ06391.1| hypothetical protein [Staphylococcus aureus] gi|304341351|gb|EFM07267.1| RadC domain protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|329312770|gb|AEB87183.1| RadC domain protein [Staphylococcus aureus subsp. aureus T0131] Length = 107 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 30/53 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53 + L+ N E S GTI+ ++ REI + + +AT +I+ HNHPSG+ Sbjct: 51 ICLNSKNEPTHIETVSIGTINFAVIHPREIFKTAILSNATGMIIGHNHPSGDI 103 >gi|293602273|ref|ZP_06684721.1| DNA repair protein RadC [Achromobacter piechaudii ATCC 43553] gi|292819352|gb|EFF78385.1| DNA repair protein RadC [Achromobacter piechaudii ATCC 43553] Length = 70 Score = 62.0 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 9 LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68 +IA E +G VY RE+V+ + +A SI++ HN PSG+ PS A + + + + + Sbjct: 1 MIAFEEMFKGISSETSVYRREVVKAGIRHNAHSILIAHNRPSGSSQPSWAYVEVARRLRS 60 Query: 69 TLNPL 73 + L Sbjct: 61 CADRL 65 >gi|288551750|gb|ADC53347.1| hypothetical protein [Staphylococcus aureus] gi|302749960|gb|ADL64137.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 95 Score = 61.6 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 30/53 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53 + L+ N E S GTI+ ++ REI + + +AT +I+ HNHPSG+ Sbjct: 39 ICLNSKNEPTHIETVSIGTINFAVIHPREIFKTAILSNATGMIIGHNHPSGDI 91 >gi|296115177|ref|ZP_06833818.1| DNA repair protein RadC [Gluconacetobacter hansenii ATCC 23769] gi|295978278|gb|EFG85015.1| DNA repair protein RadC [Gluconacetobacter hansenii ATCC 23769] Length = 266 Score = 61.2 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPS---D 57 L LD N L+ DE + G+ R I+QR L L A S+++V + G P+ Sbjct: 171 LLLDATNRLVGDERVADGS---AADMCRAILQRVLHLHAVSMVVVWD--GGTVPPTTRQM 225 Query: 58 ADINMTQNIITT-LNPLNIIVHDHIIIGKDAFVSFKGLRII 97 D + L+ ++HD II G + S + +++ Sbjct: 226 EDAATVMRQVEAHGRLLSTVMHDCIIAGDGGWTSLRREKML 266 >gi|261207313|ref|ZP_05922000.1| predicted protein [Enterococcus faecium TC 6] gi|294616533|ref|ZP_06696311.1| DNA repair protein [Enterococcus faecium E1636] gi|294618374|ref|ZP_06697952.1| DNA repair protein [Enterococcus faecium E1679] gi|294623247|ref|ZP_06702118.1| DNA repair protein [Enterococcus faecium U0317] gi|260078373|gb|EEW66077.1| predicted protein [Enterococcus faecium TC 6] gi|291590580|gb|EFF22311.1| DNA repair protein [Enterococcus faecium E1636] gi|291595351|gb|EFF26666.1| DNA repair protein [Enterococcus faecium E1679] gi|291597354|gb|EFF28534.1| DNA repair protein [Enterococcus faecium U0317] Length = 41 Score = 61.2 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 18/36 (50%) Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T+ I + I V DH+IIG+ + S + ++ Sbjct: 3 FTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 38 >gi|320667049|gb|EFX34020.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. LSU-61] Length = 102 Score = 60.8 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 25/41 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATS 41 L+L+ N LIA E GTI+ V+ RE+++R L +A + Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAA 102 >gi|30022542|ref|NP_834173.1| DNA repair protein radC [Bacillus cereus ATCC 14579] gi|229129746|ref|ZP_04258713.1| DNA repair protein radC [Bacillus cereus BDRD-Cer4] gi|29898100|gb|AAP11374.1| DNA repair protein radC [Bacillus cereus ATCC 14579] gi|228653662|gb|EEL09533.1| DNA repair protein radC [Bacillus cereus BDRD-Cer4] Length = 183 Score = 60.8 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 25/46 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVH 46 L+L+ N +I + G+++ V+ RE+ + +A SIIL H Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIILAH 174 >gi|70608422|gb|AAZ04486.1| DNA repair protein RadC [Acetobacter aceti] Length = 274 Score = 60.5 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 18/105 (17%) Query: 1 LFLDKHNILIADEV----QSRGTIDHVPVYIRE----IVQRCLELSATSIILVHNHPSGN 52 LFLD N LIADE + IR ++QR L L A +++ V Sbjct: 166 LFLDSRNQLIADETVPAFLHEDSSHEAMACIRHAVAQVLQRALALHACALVTV----DLV 221 Query: 53 PNPSDADINMTQN------IITTLNPLNIIVHDHIIIGKDAFVSF 91 D ++TQN + + L + VHDHI IG+ + SF Sbjct: 222 AEDQTLDESLTQNAPFVRELQRSAPLLAVEVHDHIAIGRGEWRSF 266 >gi|296506505|ref|YP_003667739.1| DNA repair protein [Bacillus thuringiensis BMB171] gi|296327092|gb|ADH10019.1| DNA repair protein [Bacillus thuringiensis BMB171] Length = 60 Score = 60.1 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%) Query: 50 SGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 SG+ S D+ +T+ + N + I + DH+IIG + +VS II Sbjct: 13 SGHSAESHEDVEVTKRLKECGNIIGIPLLDHVIIGDNNYVSLMKKGII 60 >gi|294011283|ref|YP_003544743.1| DNA repair protein RadC [Sphingobium japonicum UT26S] gi|292674613|dbj|BAI96131.1| DNA repair protein RadC [Sphingobium japonicum UT26S] Length = 97 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 26 YIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGK 85 R+ V L + + + P +P P ADI +T+ + L P+ I + DH+I G+ Sbjct: 27 DWRDTVNALLRWESRWLAIEQQRPD-SPLPRWADIRLTRTLSKRLRPIEIALADHVIHGR 85 Query: 86 DAFVSFKGLRII 97 SF+ ++ Sbjct: 86 KGRFSFRQAGLL 97 >gi|300814984|ref|ZP_07095211.1| DNA repair protein RadC family protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300510905|gb|EFK38178.1| DNA repair protein RadC family protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 55 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 34/53 (64%) Query: 23 VPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNI 75 V+ RE+ ++ + A SIIL+HNHP+G+P+PS D N+T+ ++ + I Sbjct: 2 TVVHPREVFRQAISDGAHSIILLHNHPTGDPSPSQEDRNLTRRLVEVSKIVGI 54 >gi|317129783|ref|YP_004096065.1| DNA repair protein RadC [Bacillus cellulosilyticus DSM 2522] gi|315474731|gb|ADU31334.1| DNA repair protein RadC [Bacillus cellulosilyticus DSM 2522] Length = 191 Score = 58.9 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 24/46 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVH 46 L+L+ N ++ + G+++ V+ RE+ + SA SI+ H Sbjct: 131 LYLNTKNHVMHKQTIFIGSLNASIVHPRELFKEAFRYSAASIVFAH 176 >gi|213019731|ref|ZP_03335536.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994772|gb|EEB55415.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 184 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L+K LI +E G ++ PVYI+EI ++ L +AT +I+ HNHP G+ PS+ D Sbjct: 123 LYLNKRRQLIGEES-YIGEMEKAPVYIKEITRKALIKNATLVIMSHNHPGGSLEPSEEDQ 181 Query: 61 NMT 63 +T Sbjct: 182 EVT 184 >gi|296506504|ref|YP_003667738.1| DNA repair protein [Bacillus thuringiensis BMB171] gi|296327091|gb|ADH10018.1| DNA repair protein [Bacillus thuringiensis BMB171] Length = 106 Score = 58.5 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 25/46 (54%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNH 48 L+ N +I + GT+D V+ RE + + +A+SII HNH Sbjct: 56 LNTKNEIIGCSIVFEGTVDSSLVHPRETFRTAILNNASSIICFHNH 101 >gi|153006775|ref|YP_001381100.1| DNA repair protein RadC [Anaeromyxobacter sp. Fw109-5] gi|152030348|gb|ABS28116.1| DNA repair protein RadC [Anaeromyxobacter sp. Fw109-5] Length = 222 Score = 57.4 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53 + LD L+ + G++ PV R+ ++ + A ++ VHNHPSG Sbjct: 136 VLLDVRGRLLRAVQVAEGSLSQCPVSPRDALRPAVREGAHGVVFVHNHPSGVM 188 >gi|182414800|ref|YP_001819866.1| DNA repair protein RadC [Opitutus terrae PB90-1] gi|177842014|gb|ACB76266.1| DNA repair protein RadC [Opitutus terrae PB90-1] Length = 199 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47 L L++ N L+ + GT + RE+ + + SA+++I HN Sbjct: 123 LCLNRKNRLLRRVEVTSGTATAALAHPREVFREAIRESASAVICAHN 169 >gi|330993526|ref|ZP_08317461.1| UPF0758 protein [Gluconacetobacter sp. SXCC-1] gi|329759556|gb|EGG76065.1| UPF0758 protein [Gluconacetobacter sp. SXCC-1] Length = 204 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 5/94 (5%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNP--SDA 58 ++LD L+ADEV + R I+ R LEL A S+I + + + P P S A Sbjct: 109 IYLDSAGQLLADEVVPQ---AAAAEMCRAILARALELHAVSLITMRDTGAAVPPPQGSMA 165 Query: 59 DINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 D + + + + V D +I G VS + Sbjct: 166 DQRWGRMLYNHARLMGMDVQDCLIRGGGRTVSLR 199 >gi|163855806|ref|YP_001630104.1| putative DNA repair protein RadC [Bordetella petrii DSM 12804] gi|163259534|emb|CAP41835.1| putative DNA repair protein RadC [Bordetella petrii] Length = 148 Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 30/47 (63%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47 +FLD + ++A E RGTI+ VY R +VQR LEL A +++L H Sbjct: 68 VFLDSMHQVLAYEPLFRGTINSTAVYPRVVVQRVLELKAAAVVLAHF 114 >gi|288551791|gb|ADC53387.1| hypothetical protein [Staphylococcus aureus] gi|329315332|gb|AEB89745.1| hypothetical protein SAT0131_02873 [Staphylococcus aureus subsp. aureus T0131] Length = 105 Score = 57.0 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53 + ++ N + S G+I+ ++ REI + + +A SI+L HNHPSG+ Sbjct: 49 ICMNSKNEPTHIQTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDT 101 >gi|317499529|ref|ZP_07957793.1| DNA repair protein RadC [Lachnospiraceae bacterium 5_1_63FAA] gi|316893183|gb|EFV15401.1| DNA repair protein RadC [Lachnospiraceae bacterium 5_1_63FAA] Length = 249 Score = 57.0 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 31/53 (58%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNP 55 LD H ++ + S GT++ REI + + +A SIIL+HNHPSG+ P Sbjct: 161 LDAHGVVQNANIVSMGTVNQTVSSPREIFKSAILSNAHSIILMHNHPSGSVKP 213 >gi|15923047|ref|NP_370581.1| hypothetical protein SAV0057 [Staphylococcus aureus subsp. aureus Mu50] gi|15925760|ref|NP_373293.1| hypothetical protein SA0053 [Staphylococcus aureus subsp. aureus N315] gi|57865837|ref|YP_190047.1| RadC domain-containing protein [Staphylococcus epidermidis RP62A] gi|148266489|ref|YP_001245432.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH9] gi|150392522|ref|YP_001315197.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH1] gi|156978387|ref|YP_001440646.1| hypothetical protein SAHV_0056 [Staphylococcus aureus subsp. aureus Mu3] gi|254663985|ref|ZP_05143457.1| hypothetical protein SauraM_00265 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|295405332|ref|ZP_06815142.1| DNA repair protein RadC [Staphylococcus aureus A8819] gi|295426607|ref|ZP_06819246.1| RadC domain-containing protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297244669|ref|ZP_06928549.1| RadC domain-containing protein [Staphylococcus aureus A8796] gi|13699972|dbj|BAB41271.1| truncated(radC) [Staphylococcus aureus subsp. aureus N315] gi|14245824|dbj|BAB56219.1| truncated hypothetical protein [Staphylococcus aureus subsp. aureus Mu50] gi|57636495|gb|AAW53283.1| RadC domain protein [Staphylococcus epidermidis RP62A] gi|62815911|emb|CAH17564.1| hypothetical protein [Staphylococcus aureus] gi|70568187|dbj|BAE06284.1| truncated hypothetical protein [Staphylococcus aureus] gi|147739558|gb|ABQ47856.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH9] gi|149944974|gb|ABR50910.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH1] gi|156720522|dbj|BAF76939.1| truncated hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|195963184|emb|CAQ43009.1| hypothetical protein [Staphylococcus aureus] gi|221327666|gb|ACM17510.1| truncated radC DNA repair protein [Staphylococcus aureus] gi|238773854|dbj|BAH66417.1| hypothetical protein [Staphylococcus aureus] gi|285815782|gb|ADC36269.1| truncated DNA repair protein RadC [Staphylococcus aureus 04-02981] gi|294969407|gb|EFG45426.1| DNA repair protein RadC [Staphylococcus aureus A8819] gi|295129059|gb|EFG58686.1| RadC domain-containing protein [Staphylococcus aureus subsp. aureus EMRSA16] gi|297178186|gb|EFH37433.1| RadC domain-containing protein [Staphylococcus aureus A8796] Length = 105 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 30/52 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52 + ++ N + S G+I+ ++ REI + + +A SI+L HNHPSG+ Sbjct: 49 ICMNSKNEPTHIQTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD 100 >gi|304380749|ref|ZP_07363417.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304340686|gb|EFM06618.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 49 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 18/44 (40%) Query: 53 PNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 PS DI T + L I + DHIIIG + F S Sbjct: 1 MTPSQEDIITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 44 >gi|14021044|dbj|BAB47668.1| hypothetical protein [Staphylococcus aureus] gi|27529893|dbj|BAC53830.1| hypothetical protein [Staphylococcus aureus] Length = 105 Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53 + ++ N + S G+I+ ++ REI + + +A SI+L HNHPSG+ Sbjct: 49 ICMNSKNEPTHIQTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDI 101 >gi|304379984|ref|ZP_07362713.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304341564|gb|EFM07474.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 100 Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 31/52 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52 + ++ N ++ S G+I+ ++ REI + + +A SI+L HNHPSG+ Sbjct: 49 ICMNSKNEPTHIQILSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD 100 >gi|221141077|ref|ZP_03565570.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258410975|ref|ZP_05681255.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|257840125|gb|EEV64589.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|315129939|gb|EFT85929.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus CGS03] Length = 47 Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 18/42 (42%) Query: 55 PSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 PS DI T + L I + DHIIIG + F S Sbjct: 1 PSQEDIITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 42 >gi|257794410|ref|ZP_05643389.1| DNA repair protein RadC [Staphylococcus aureus A9781] gi|258407627|ref|ZP_05680763.1| DNA repair protein RadC [Staphylococcus aureus A9763] gi|258419905|ref|ZP_05682867.1| DNA repair protein RadC [Staphylococcus aureus A9719] gi|258445162|ref|ZP_05693399.1| RadC domain-containing protein [Staphylococcus aureus A6300] gi|258447766|ref|ZP_05695905.1| RadC domain-containing protein [Staphylococcus aureus A6224] gi|258452204|ref|ZP_05700218.1| RadC domain-containing protein [Staphylococcus aureus A5948] gi|258455611|ref|ZP_05703566.1| DNA repair protein RadC [Staphylococcus aureus A5937] gi|282928311|ref|ZP_06335914.1| RadC domain-containing protein [Staphylococcus aureus A10102] gi|257788382|gb|EEV26722.1| DNA repair protein RadC [Staphylococcus aureus A9781] gi|257840852|gb|EEV65309.1| DNA repair protein RadC [Staphylococcus aureus A9763] gi|257844187|gb|EEV68574.1| DNA repair protein RadC [Staphylococcus aureus A9719] gi|257856070|gb|EEV78989.1| RadC domain-containing protein [Staphylococcus aureus A6300] gi|257859048|gb|EEV81912.1| RadC domain-containing protein [Staphylococcus aureus A6224] gi|257860041|gb|EEV82875.1| RadC domain-containing protein [Staphylococcus aureus A5948] gi|257861823|gb|EEV84596.1| DNA repair protein RadC [Staphylococcus aureus A5937] gi|282589895|gb|EFB94978.1| RadC domain-containing protein [Staphylococcus aureus A10102] gi|315129029|gb|EFT85025.1| hypothetical protein CGSSa03_13452 [Staphylococcus aureus subsp. aureus CGS03] Length = 99 Score = 56.2 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 29/51 (56%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51 + ++ N + S G+I+ ++ REI + + +A SI+L HNHPSG Sbjct: 49 ICMNSKNEPTHIQTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSG 99 >gi|22094439|gb|AAM91899.1| unknown [Staphylococcus aureus] Length = 106 Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 31/53 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53 + ++ N ++ S G+I+ ++ REI + + +A SI+L HNHPSG+ Sbjct: 49 ICMNSKNEPTHIQILSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDI 101 >gi|118464916|ref|YP_884148.1| DNA repair protein RadC [Mycobacterium avium 104] gi|118166203|gb|ABK67100.1| DNA repair protein RadC [Mycobacterium avium 104] Length = 66 Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 30/62 (48%) Query: 27 IREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKD 86 +REI+ L + + HNHPSG SDAD +T ++ + + H+++ D Sbjct: 1 MREILNAVLRHDGRAFAIAHNHPSGAAEASDADRQVTASVRAAATTVGLRFLGHVVVAND 60 Query: 87 AF 88 + Sbjct: 61 RW 62 >gi|57867122|ref|YP_188799.1| truncated DNA repair protein RadC [Staphylococcus epidermidis RP62A] gi|57637780|gb|AAW54568.1| truncated DNA repair protein RadC [Staphylococcus epidermidis RP62A] Length = 184 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 31/52 (59%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52 L L+ NI+ +GT++ ++ RE+ + S+ SII+VHNHPSG+ Sbjct: 128 LLLNSKNIVTKQAWVYKGTLNSSIIHPREVFNIAIRESSNSIIVVHNHPSGD 179 >gi|13928286|dbj|BAB46978.1| hypothetical protein [Staphylococcus aureus] Length = 105 Score = 55.8 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 31/53 (58%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53 + ++ N ++ S G+I+ ++ REI + + +A SI+L HNHPSG+ Sbjct: 49 ICMNSKNEPTHIQILSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDI 101 >gi|307293291|ref|ZP_07573137.1| DNA repair protein RadC [Sphingobium chlorophenolicum L-1] gi|306881357|gb|EFN12573.1| DNA repair protein RadC [Sphingobium chlorophenolicum L-1] Length = 101 Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%) Query: 34 CLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93 L + + + +G P ADI +T+ + L P+ I + DH+I SF+ Sbjct: 38 ALLRWDSRWLAIEQRRTGGLLPHWADIRLTRVLSKRLRPMEIGLADHVIHSGQGRFSFRE 97 Query: 94 LRII 97 ++ Sbjct: 98 AGLL 101 >gi|309803315|ref|ZP_07697412.1| DNA repair protein RadC [Lactobacillus iners LactinV 11V1-d] gi|309804812|ref|ZP_07698876.1| DNA repair protein RadC [Lactobacillus iners LactinV 09V1-c] gi|309807743|ref|ZP_07701677.1| DNA repair protein RadC [Lactobacillus iners LactinV 01V1-a] gi|309809967|ref|ZP_07703815.1| DNA repair protein RadC [Lactobacillus iners SPIN 2503V10-D] gi|308164823|gb|EFO67073.1| DNA repair protein RadC [Lactobacillus iners LactinV 11V1-d] gi|308165922|gb|EFO68141.1| DNA repair protein RadC [Lactobacillus iners LactinV 09V1-c] gi|308169003|gb|EFO71087.1| DNA repair protein RadC [Lactobacillus iners LactinV 01V1-a] gi|308169755|gb|EFO71800.1| DNA repair protein RadC [Lactobacillus iners SPIN 2503V10-D] Length = 154 Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 27/45 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILV 45 +++D N +IA++V +GT++ ++ R+I + + +A LV Sbjct: 109 VYVDVKNKIIAEKVIFKGTLNQAIIHPRDIFRWAIIYNAAGFFLV 153 >gi|325913010|ref|ZP_08175383.1| DNA repair protein RadC [Lactobacillus iners UPII 60-B] gi|325477690|gb|EGC80829.1| DNA repair protein RadC [Lactobacillus iners UPII 60-B] Length = 154 Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 27/45 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILV 45 +++D N +IA++V +GT++ ++ R+I + + +A LV Sbjct: 109 VYVDVKNKIIAEKVIFKGTLNQAIIHPRDIFRWAIIYNAAGFFLV 153 >gi|167045168|gb|ABZ09829.1| putative RadC, DNA repair protein [uncultured marine microorganism HF4000_APKG8L7] Length = 195 Score = 54.3 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 22/36 (61%), Positives = 27/36 (75%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLE 36 LFLD N +I DEVQ GT++H PVY RE+V+R LE Sbjct: 136 LFLDTKNKIIHDEVQQTGTVNHTPVYPREVVKRALE 171 >gi|23099509|ref|NP_692975.1| hypothetical protein OB2054 [Oceanobacillus iheyensis HTE831] gi|22777738|dbj|BAC14010.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 36 Score = 54.3 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ ++ + + I V DH+IIG FVS K + Sbjct: 1 MTKRLVDSGKLIGIEVLDHLIIGDKKFVSLKEKGYL 36 >gi|258542142|ref|YP_003187575.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01] gi|256633220|dbj|BAH99195.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01] gi|256636279|dbj|BAI02248.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-03] gi|256639332|dbj|BAI05294.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-07] gi|256642388|dbj|BAI08343.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-22] gi|256645443|dbj|BAI11391.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-26] gi|256648496|dbj|BAI14437.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-32] gi|256651549|dbj|BAI17483.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654540|dbj|BAI20467.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-12] Length = 274 Score = 53.9 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 10/101 (9%) Query: 1 LFLDKHNILIADEV----QSRGTIDHVPVYIRE----IVQRCLELSATSIILVHNHPSGN 52 LFLD N LIADE G IR+ ++QR L L A +++ V Sbjct: 166 LFLDSRNQLIADEAVPAFLHEGRSHEAMASIRQAVALVLQRALALHACALVTVDLVAEDQ 225 Query: 53 PNPS--DADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91 + + + + + L + VH+HI IG + SF Sbjct: 226 TLDQTLAQNASFVRELQRSAPLLAVEVHEHIAIGCGEWRSF 266 >gi|257462804|ref|ZP_05627211.1| DNA primase TraC3 [Fusobacterium sp. D12] Length = 595 Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 24/43 (55%) Query: 55 PSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 PS DI +T++I + N + DH I+GK+ SF+ ++ Sbjct: 3 PSRKDIELTRDIESLCKKFNKELLDHTIVGKEDIFSFQREGML 45 >gi|94498573|ref|ZP_01305127.1| hypothetical protein SKA58_09973 [Sphingomonas sp. SKA58] gi|94421937|gb|EAT06984.1| hypothetical protein SKA58_09973 [Sphingomonas sp. SKA58] Length = 99 Score = 53.9 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 28/49 (57%) Query: 49 PSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 P +P DI +T+ II ++ PL++ V DH+I D + SF+ ++ Sbjct: 51 PHQAASPGPDDITLTRAIIRSVRPLDLRVADHLIAAGDQWFSFRAAGLL 99 >gi|209542393|ref|YP_002274622.1| DNA repair protein RadC [Gluconacetobacter diazotrophicus PAl 5] gi|209530070|gb|ACI50007.1| DNA repair protein RadC [Gluconacetobacter diazotrophicus PAl 5] Length = 244 Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 15/106 (14%) Query: 1 LFLDKHNILIADEVQS----RGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPS 56 LFLD N +IADE G +D V R I+ R L+L AT+ + + P P Sbjct: 145 LFLDSSNHIIADEALDAALDTGELDLVQ---RHILLRALDLHATAFVGIRIAP---VWPP 198 Query: 57 DA-----DINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 A D + Q I L++ V DH+I+ ++S + R + Sbjct: 199 PATLVERDAVLMQAISYHAQNLSLTVQDHLILHHGQWLSLRQQRRL 244 >gi|162147771|ref|YP_001602232.1| putative DNA repair protein radC [Gluconacetobacter diazotrophicus PAl 5] gi|161786348|emb|CAP55930.1| putative DNA repair protein radC [Gluconacetobacter diazotrophicus PAl 5] Length = 244 Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 15/106 (14%) Query: 1 LFLDKHNILIADEVQS----RGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPS 56 LFLD N +IADE G +D V R I+ R L+L AT+ + + P P Sbjct: 145 LFLDSSNHIIADEALDAALDTGELDLVQ---RHILLRALDLHATAFVGIRIAP---VWPP 198 Query: 57 DA-----DINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 A D + Q I L++ V DH+I+ ++S + R + Sbjct: 199 PAALVERDAVLMQAISYHAQNLSLTVQDHLILHHGQWLSLRQQRRL 244 >gi|182416193|ref|YP_001821259.1| DNA repair protein RadC [Opitutus terrae PB90-1] gi|177843407|gb|ACB77659.1| DNA repair protein RadC [Opitutus terrae PB90-1] Length = 137 Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 26/47 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47 ++LD+ N + + + GT+D V RE+ + + +++++ HN Sbjct: 61 VYLDRKNHPLGRHLITLGTVDSTLVSCREVFRGAIVAGCSALVVAHN 107 >gi|301063337|ref|ZP_07203876.1| DNA repair protein [delta proteobacterium NaphS2] gi|300442500|gb|EFK06726.1| DNA repair protein [delta proteobacterium NaphS2] Length = 2393 Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%) Query: 8 ILIADEVQSRGTIDHVPVYIREIVQRCLELS-ATSIILVHNHPSGNPNPSDADINMTQNI 66 ++ ++GT+ + R A ++ L HNHPSG P PS D N T+ + Sbjct: 1012 KILEIHRVTKGTVSSTLAPTVSTMGRVFNTPGAHTVYLAHNHPSGEPRPSPQDENFTKEM 1071 Query: 67 ITTLNPLNIIVHDHIIIGKDAF 88 NI V +++G+ ++ Sbjct: 1072 RAAGVLKNIDVR-SLVLGEKSW 1092 >gi|255017821|ref|ZP_05289947.1| DNA repair protein RadC [Listeria monocytogenes FSL F2-515] Length = 65 Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 18/34 (52%) Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 + + N + I + DHIIIGK+ ++S K Sbjct: 31 YKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 64 >gi|295397907|ref|ZP_06807967.1| DNA repair protein RadC [Aerococcus viridans ATCC 11563] gi|294973848|gb|EFG49615.1| DNA repair protein RadC [Aerococcus viridans ATCC 11563] Length = 40 Score = 52.0 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 20/36 (55%) Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 T ++ + L I + DH I+ + ++SFK + ++ Sbjct: 5 FTHRMMEAGDVLGIELLDHFIVSEKNWLSFKEIGLL 40 >gi|282167039|gb|ADA81055.1| DNA repair protein RadC [Staphylococcus aureus] Length = 114 Score = 50.8 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50 L+ N + GT+D ++ R+ Q + + S+I HNHPS Sbjct: 54 LNTKNEVTTLYTVHIGTLDMSIIHPRDSFQVAILNNCKSVIFAHNHPS 101 >gi|94310187|ref|YP_583397.1| RadC family protein [Cupriavidus metallidurans CH34] Length = 36 Score = 50.8 bits (121), Expect = 7e-05, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 16/36 (44%) Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT + L +++ DHIII SF ++ Sbjct: 1 MTSQLRQALALVDVRTLDHIIIAGSRTTSFAERGLL 36 >gi|227885220|ref|ZP_04003025.1| conserved hypothetical protein [Escherichia coli 83972] gi|227837809|gb|EEJ48275.1| conserved hypothetical protein [Escherichia coli 83972] Length = 33 Score = 50.4 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 17/33 (51%) Query: 65 NIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++ L ++I V DH+I+G SF ++ Sbjct: 1 RLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 33 >gi|330503727|ref|YP_004380596.1| RadC-like protein [Pseudomonas mendocina NK-01] gi|328918013|gb|AEB58844.1| RadC-like protein [Pseudomonas mendocina NK-01] Length = 137 Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 17/33 (51%), Positives = 20/33 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQR 33 LFLD + LI RGTID VY RE+V+R Sbjct: 72 LFLDAKHNLIQYVEMFRGTIDSASVYPREMVKR 104 >gi|301327411|ref|ZP_07220656.1| conserved domain protein [Escherichia coli MS 78-1] gi|300846004|gb|EFK73764.1| conserved domain protein [Escherichia coli MS 78-1] Length = 38 Score = 50.4 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 24/38 (63%) Query: 7 NILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIIL 44 N LIA E GTI+ V+ RE+++R L +A +++L Sbjct: 1 NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVL 38 >gi|58584431|ref|YP_198004.1| RadC-like DNA repair protein [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418747|gb|AAW70762.1| RadC-like DNA repair protein [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 84 Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 40/57 (70%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSD 57 ++ +K LIA+++Q+ TID +Y+++I++R L + +TSI++ HNH SGN PS Sbjct: 20 IYTNKKYHLIAEDLQNISTIDQTSLYVKDIIKRVLLIGSTSIVISHNHSSGNTQPSS 76 >gi|163856483|ref|YP_001630781.1| DNA repair protein radC-like protein [Bordetella petrii DSM 12804] gi|163260211|emb|CAP42513.1| DNA repair protein radC homolog [Bordetella petrii] Length = 132 Score = 50.1 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 15/33 (45%), Positives = 18/33 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQR 33 LFLD + LI GTID V+ RE+V R Sbjct: 72 LFLDTRHRLIDYVEMFHGTIDSAEVHPREVVNR 104 >gi|227552772|ref|ZP_03982821.1| DNA repair protein C [Enterococcus faecium TX1330] gi|257897308|ref|ZP_05676961.1| DNA repair protein RadC [Enterococcus faecium Com12] gi|227178096|gb|EEI59068.1| DNA repair protein C [Enterococcus faecium TX1330] gi|257833873|gb|EEV60294.1| DNA repair protein RadC [Enterococcus faecium Com12] Length = 95 Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 25/46 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVH 46 + L+ N ++A G+++ V+ RE+ + + +A S+I+ H Sbjct: 50 MCLNTKNNVVAVHRCHAGSLNASLVHPREVFKSAILNNAASVIVAH 95 >gi|291548120|emb|CBL21228.1| DNA repair proteins [Ruminococcus sp. SR1/5] Length = 50 Score = 49.7 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Query: 62 MTQNIITTLNPLNIIVHDHIIIGK--DAFVSFKGLRII 97 +T+ + L I + DHII+G +SF+ +++ Sbjct: 3 VTRKLQKCGQLLGIELLDHIIVGGTNGKMLSFREEKML 40 >gi|229085377|ref|ZP_04217618.1| hypothetical DNA repair protein [Bacillus cereus Rock3-44] gi|228697853|gb|EEL50597.1| hypothetical DNA repair protein [Bacillus cereus Rock3-44] Length = 126 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 25/46 (54%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVH 46 L LD N A V G+++ V+ RE+++ + +A SII+ H Sbjct: 72 LCLDIKNQPTAINVCHIGSLNSSIVHPREVLKPAIISNAASIIVFH 117 >gi|83311132|ref|YP_421396.1| hypothetical protein amb2033 [Magnetospirillum magneticum AMB-1] gi|82945973|dbj|BAE50837.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 36 Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 23/36 (63%) Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+++ L + I VHDH+++G+ SFK + ++ Sbjct: 1 MTRSVKEALAAVGIAVHDHVVVGRKGHASFKAMGLL 36 >gi|300919528|ref|ZP_07136026.1| DNA repair protein [Escherichia coli MS 115-1] gi|300413422|gb|EFJ96732.1| DNA repair protein [Escherichia coli MS 115-1] Length = 102 Score = 48.9 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 18/30 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREI 30 L+LD N LIA E GTI+ V+ RE+ Sbjct: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREV 91 >gi|167957186|ref|ZP_02544260.1| hypothetical protein cdiviTM7_00840 [candidate division TM7 single-cell isolate TM7c] Length = 38 Score = 48.9 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 20/35 (57%) Query: 56 SDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90 S AD ++T + L I ++DHIII K ++S Sbjct: 2 SQADKDVTSRLAEAGKLLGITLNDHIIITKSEYIS 36 >gi|257464463|ref|ZP_05628835.1| DNA repair protein RadC [Fusobacterium sp. D12] gi|317061951|ref|ZP_07926436.1| conserved hypothetical protein [Fusobacterium sp. D12] gi|313687627|gb|EFS24462.1| conserved hypothetical protein [Fusobacterium sp. D12] Length = 226 Score = 48.5 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 29/48 (60%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51 DK+N + E +GT++ PV ++ ++ L+ + I ++HNHPSG Sbjct: 171 DKNNKITNYETLFKGTVNSAPVDLKVLIPYLLDENIKGIQILHNHPSG 218 >gi|312143656|ref|YP_003995102.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus'] gi|311904307|gb|ADQ14748.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus'] Length = 821 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 10/77 (12%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ NI+ + EV +RG P I I+ +++HNHPSG+ PS ADI + Sbjct: 33 LNDKNIIDSFEVLARGNSYSAPAVINNIM--------AGEMIIHNHPSGDLTPSAADIRL 84 Query: 63 TQNIITTLNPLNIIVHD 79 + + + D Sbjct: 85 ASKM--AAREVGFAIID 99 >gi|307290817|ref|ZP_07570711.1| hypothetical protein HMPREF9509_01116 [Enterococcus faecalis TX0411] gi|306498126|gb|EFM67649.1| hypothetical protein HMPREF9509_01116 [Enterococcus faecalis TX0411] gi|315145410|gb|EFT89426.1| conserved hypothetical protein [Enterococcus faecalis TX2141] Length = 35 Score = 48.1 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 14/31 (45%) Query: 66 IITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 + + I + DHII+G ++S + Sbjct: 1 MEECGEMMGIQLLDHIIVGDSGYISLREENF 31 >gi|331681615|ref|ZP_08382250.1| intergenic-region protein [Escherichia coli H299] gi|331081157|gb|EGI52320.1| intergenic-region protein [Escherichia coli H299] Length = 96 Score = 47.4 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 18/30 (60%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREI 30 L+L+ N LIA E GTI+ V+ RE+ Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREV 96 >gi|206602587|gb|EDZ39068.1| DNA repair protein (RadC) [Leptospirillum sp. Group II '5-way CG'] Length = 143 Score = 47.0 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 20/43 (46%) Query: 5 KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47 + + I S GT+ V+ RE + SA ++I +HN Sbjct: 101 QRHQPIDLHKISEGTLSMTLVHPREAFSPAIRDSAAAVIFLHN 143 >gi|172037406|ref|YP_001803907.1| hypothetical protein cce_2493 [Cyanothece sp. ATCC 51142] gi|171698860|gb|ACB51841.1| hypothetical protein cce_2493 [Cyanothece sp. ATCC 51142] Length = 61 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 23/39 (58%) Query: 53 PNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91 P PS D+++T+ ++ + + I + DH+I+G+ S Sbjct: 10 PEPSQQDLDLTEQLLKGMQLIRIPLIDHLILGEGNHCSL 48 >gi|11356416|pir||T44106 hypothetical protein [imported] - Staphylococcus aureus (fragment) Length = 193 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 21/39 (53%) Query: 52 NPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90 + PS DI +TQ I + II++DHII ++ S Sbjct: 1 DITPSPGDIKITQRIKEISEMMGIILYDHIIFSENDHHS 39 >gi|218660004|ref|ZP_03515934.1| DNA repair protein RadC [Rhizobium etli IE4771] Length = 54 Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 22/46 (47%), Positives = 28/46 (60%) Query: 44 LVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFV 89 + N PS ADI+MT+ II + L+IIVHD IIIGK+ V Sbjct: 8 IPRNTSPAQEKPSRADIDMTKLIIDAVKALDIIVHDQIIIGKNGHV 53 >gi|320640296|gb|EFX09863.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str. G5101] Length = 88 Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYI 27 L+L+ N LIA E GTI+ V+ Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHP 88 >gi|152976869|ref|YP_001376386.1| DNA repair protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025621|gb|ABS23391.1| DNA repair protein [Bacillus cytotoxicus NVH 391-98] Length = 32 Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 16/32 (50%) Query: 66 IITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++ + I V DHIIIG FVS + I Sbjct: 1 MVECGKIIGIEVLDHIIIGDHKFVSLREKGHI 32 >gi|218705500|ref|YP_002413019.1| hypothetical protein ECUMN_2302 [Escherichia coli UMN026] gi|218432597|emb|CAR13491.1| hypothetical protein ECUMN_2302 [Escherichia coli UMN026] Length = 77 Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%) Query: 35 LELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHI 81 + ++ ++IL +NHPSG PS A M I L +++ H Sbjct: 1 MGVNTAAVILANNHPSGISEPSHAGKVMRVQIKKGLGIVDMRTLAHF 47 >gi|196044733|ref|ZP_03111967.1| DNA repair protein [Bacillus cereus 03BB108] gi|196024221|gb|EDX62894.1| DNA repair protein [Bacillus cereus 03BB108] Length = 40 Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 19/33 (57%) Query: 46 HNHPSGNPNPSDADINMTQNIITTLNPLNIIVH 78 H HPSG+P PS DI +T+ ++ + I + Sbjct: 6 HFHPSGDPAPSREDIEVTKRLVECGRIIGIELI 38 >gi|148268134|ref|YP_001247077.1| hypothetical protein SaurJH9_1711 [Staphylococcus aureus subsp. aureus JH9] gi|258420224|ref|ZP_05683179.1| predicted protein [Staphylococcus aureus A9719] gi|258446896|ref|ZP_05695050.1| conserved hypothetical protein [Staphylococcus aureus A6300] gi|147741203|gb|ABQ49501.1| hypothetical protein SaurJH9_1711 [Staphylococcus aureus subsp. aureus JH9] gi|257843935|gb|EEV68329.1| predicted protein [Staphylococcus aureus A9719] gi|257854471|gb|EEV77420.1| conserved hypothetical protein [Staphylococcus aureus A6300] gi|285817336|gb|ADC37823.1| DNA repair protein RadC [Staphylococcus aureus 04-02981] gi|302751480|gb|ADL65657.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus str. JKD6008] gi|329314326|gb|AEB88739.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus T0131] gi|329727320|gb|EGG63776.1| hypothetical protein SA21172_0510 [Staphylococcus aureus subsp. aureus 21172] Length = 38 Score = 44.7 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 13/33 (39%) Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96 + L I + DHIIIG + F S Sbjct: 1 MRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 33 >gi|325273177|ref|ZP_08139467.1| hypothetical protein G1E_09237 [Pseudomonas sp. TJI-51] gi|324101684|gb|EGB99240.1| hypothetical protein G1E_09237 [Pseudomonas sp. TJI-51] Length = 40 Score = 43.9 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%) Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 ++T ++ L +++ V DHIIIG +S I Sbjct: 2 HLTLSLKRGLALIDVRVLDHIIIGDGEPLSMVEQGWI 38 >gi|299132797|ref|ZP_07025992.1| conserved hypothetical protein [Afipia sp. 1NLS2] gi|298592934|gb|EFI53134.1| conserved hypothetical protein [Afipia sp. 1NLS2] Length = 36 Score = 43.9 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 17/36 (47%), Positives = 26/36 (72%) Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT++I+ PL I VHDHII+GK+ S KG++++ Sbjct: 1 MTKSIVAIAAPLGISVHDHIIVGKNGHSSLKGMKLM 36 >gi|309389240|gb|ADO77120.1| DNA repair protein RadC [Halanaerobium praevalens DSM 2228] Length = 816 Score = 43.5 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 10/76 (13%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 L+ I+ EV +RG P L +++HNHPSG+ PS ADI++ Sbjct: 33 LNNKKIIKEIEVLARGNSYSAPA--------VLNDLMAGEMIIHNHPSGDLTPSAADISL 84 Query: 63 TQNIITTLNPLNIIVH 78 + + + Sbjct: 85 AAKM--AAREVGFAII 98 >gi|320657673|gb|EFX25468.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320663354|gb|EFX30656.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli O55:H7 str. USDA 5905] Length = 87 Score = 43.1 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVY 26 L+L+ N LIA E GTI+ V+ Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVH 87 >gi|317053594|ref|YP_004118728.1| DNA repair protein RadC [Pantoea sp. At-9b] gi|316952699|gb|ADU72172.1| DNA repair protein RadC [Pantoea sp. At-9b] Length = 143 Score = 42.7 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47 FL+ + L A E +G I V + ++V R L+L+A + + HN Sbjct: 52 FLNNQHQLFAYEEMFQGIISSVGI-PPDVVYRTLQLNAAVVTVTHN 96 >gi|237732874|ref|ZP_04563355.1| predicted protein [Mollicutes bacterium D7] gi|229384027|gb|EEO34118.1| predicted protein [Coprobacillus sp. D7] Length = 237 Score = 42.0 bits (98), Expect = 0.030, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 3/89 (3%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHP-SGNPNPSDADIN 61 L+ +I GT V + I++I + ++ +VHNHP S N ++ DI Sbjct: 109 LNNE-QVIDIHK-FVGTECSVGISIQDIFKYLIKKGINKYAIVHNHPNSIVANFTEDDIK 166 Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVS 90 + N + D +I S Sbjct: 167 NNYILGFYSNTFGLEFIDSFVITPFDCES 195 >gi|154482369|ref|ZP_02024817.1| hypothetical protein EUBVEN_00014 [Eubacterium ventriosum ATCC 27560] gi|149736786|gb|EDM52672.1| hypothetical protein EUBVEN_00014 [Eubacterium ventriosum ATCC 27560] Length = 61 Score = 41.6 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 71 NPLNIIVHDHIIIG--KDAFVSFKGLRII 97 N + I + DHII+G K + S + +++ Sbjct: 1 NLVGIPLLDHIIVGPDKGRYFSLRDKQLV 29 >gi|120435705|ref|YP_861391.1| RadC-like DNA repair protein [Gramella forsetii KT0803] gi|117577855|emb|CAL66324.1| RadC-like DNA repair protein [Gramella forsetii KT0803] Length = 117 Score = 41.2 bits (96), Expect = 0.052, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 20/47 (42%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47 + L+ N + S G I V +R + L+ + S+IL H Sbjct: 69 VLLNNANKVKGIFEVSTGGITGTLVDLRILFAVILKSLSCSVILAHY 115 >gi|320656435|gb|EFX24339.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 90 Score = 40.8 bits (95), Expect = 0.061, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 13/28 (46%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIR 28 L+L+ N LIA E GTI+ Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTESIPG 89 >gi|149280010|ref|ZP_01886135.1| bifunctional protein: riboflavin kinase; FAD synthetase [Pedobacter sp. BAL39] gi|149229207|gb|EDM34601.1| bifunctional protein: riboflavin kinase; FAD synthetase [Pedobacter sp. BAL39] Length = 311 Score = 40.8 bits (95), Expect = 0.063, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 10 IADEVQSRGTIDHVPVYIREIVQRCLELSATS-----IILVHNHPSGNPNPSDADINMTQ 64 + V + GT D V ++I++R EL+ S I+ HP +P + D+ + Sbjct: 13 LDHAVVTIGTFDGVHFGHQKIIKRLCELAKASNGESVILTFFPHPRMIIDPENQDLKLIN 72 Query: 65 NIITTLNPLNIIVHDHIIIG 84 I + L + DH+II Sbjct: 73 TIAEKASILEGLGVDHLIIT 92 >gi|268610724|ref|ZP_06144451.1| DNA repair protein RadC [Ruminococcus flavefaciens FD-1] Length = 229 Score = 40.4 bits (94), Expect = 0.079, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 5/84 (5%) Query: 12 DEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLN 71 + G+I + I++R I++ P G PS + +T + Sbjct: 145 YKDVLHGSIGQRDLAELLIMRRAYR-----IVIGIFQPDGCGFPSPDNFAVTHAVSEISA 199 Query: 72 PLNIIVHDHIIIGKDAFVSFKGLR 95 + + + D ++ K + S + Sbjct: 200 AIGVELVDSVVCCKSSAYSMRSSG 223 >gi|189426665|ref|YP_001953842.1| helicase c2 [Geobacter lovleyi SZ] gi|189422924|gb|ACD97322.1| helicase c2 [Geobacter lovleyi SZ] Length = 838 Score = 40.0 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 LD + ++++ E +RG VP I+ R + +++HNHPSG PSDAD++ Sbjct: 30 CLDDNGVMVSAEAIARGNKHAVPA----ILSRA----SAGQMVLHNHPSGELIPSDADLD 81 Query: 62 MTQNIITTLNPLNI 75 + I Sbjct: 82 LASICGNNGIGFGI 95 >gi|120435583|ref|YP_861269.1| RadC-like DNA repair protein [Gramella forsetii KT0803] gi|117577733|emb|CAL66202.1| RadC-like DNA repair protein [Gramella forsetii KT0803] Length = 118 Score = 39.7 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47 + L+ N + G I V +R + L+ + ++I+ H Sbjct: 70 MLLNNGNKVKGIFEVFTGGITGTLVDLRILFAVVLKSLSVNLIIAHY 116 >gi|222053722|ref|YP_002536084.1| helicase c2 [Geobacter sp. FRC-32] gi|221563011|gb|ACM18983.1| helicase c2 [Geobacter sp. FRC-32] Length = 835 Score = 39.3 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 10/76 (13%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D+ ++I E +RG +D V + +++ +++HNHPSG PS ADI + Sbjct: 32 DEAKVVIDAEPLARGNVDAVAAI--------MIVTSFGDVVIHNHPSGILTPSQADIEIA 83 Query: 64 QNIITTLNPLNIIVHD 79 + + + D Sbjct: 84 SLMGN--QGVGFYIVD 97 >gi|328949537|ref|YP_004366873.1| SNF2-related protein [Treponema succinifaciens DSM 2489] gi|328449861|gb|AEB15576.1| SNF2-related protein [Treponema succinifaciens DSM 2489] Length = 2135 Score = 39.3 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 13/101 (12%) Query: 1 LFLDKHNILIADEV-QSRGTIDHVPVY------IREIVQRCLELSATSIILVHNHPSGNP 53 + +D+HN I D++ S + + +++++ R E ++ VHNHPSGN Sbjct: 1866 VLIDRHNGEIRDQIAVSSHMPNTTIISDPNNQTLKQVISRAEEKDCL-VVAVHNHPSGNT 1924 Query: 54 NPSDADINMTQNIITTLNPLNI--IVHDHIIIGKDAFVSFK 92 PSD DI T+ + ++ + HII+ SF Sbjct: 1925 RPSDYDIKSTKALEESMKRKDGFNRFAGHIIL---DHDSFA 1962 >gi|229133317|ref|ZP_04262146.1| DNA repair protein [Bacillus cereus BDRD-ST196] gi|228650133|gb|EEL06139.1| DNA repair protein [Bacillus cereus BDRD-ST196] Length = 84 Score = 39.3 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIV 31 L+ N +I + GT+D V+ R +V Sbjct: 56 LNTKNEIIGCSIVFEGTVDSSLVHPRAMV 84 >gi|330830833|ref|YP_004393785.1| putative DNA repair protein RadC [Aeromonas veronii B565] gi|328805969|gb|AEB51168.1| Putative DNA repair protein RadC [Aeromonas veronii B565] Length = 93 Score = 38.9 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 13/25 (52%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPV 25 LFLD + ++A E GT+ V Sbjct: 69 LFLDNQHRILAYEELFLGTLSAATV 93 >gi|260888102|ref|ZP_05899365.1| GTP-binding protein [Selenomonas sputigena ATCC 35185] gi|260862131|gb|EEX76631.1| GTP-binding protein [Selenomonas sputigena ATCC 35185] Length = 664 Score = 37.7 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 7/75 (9%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +++D+ +I V + T+D V R V+ + + +H HPSG+ SD DI Sbjct: 73 VYVDRKGRIIEISVGNTWTVDLPAVDARSEVRL------SGVRCIHTHPSGDTELSDPDI 126 Query: 61 NMTQNII-TTLNPLN 74 + + + + + Sbjct: 127 SSLRRLRFDAMAAIG 141 >gi|330839979|ref|YP_004414559.1| GTP-binding proten HflX [Selenomonas sputigena ATCC 35185] gi|329747743|gb|AEC01100.1| GTP-binding proten HflX [Selenomonas sputigena ATCC 35185] Length = 647 Score = 37.7 bits (87), Expect = 0.50, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 7/75 (9%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 +++D+ +I V + T+D V R V+ + + +H HPSG+ SD DI Sbjct: 56 VYVDRKGRIIEISVGNTWTVDLPAVDARSEVRL------SGVRCIHTHPSGDTELSDPDI 109 Query: 61 NMTQNII-TTLNPLN 74 + + + + + Sbjct: 110 SSLRRLRFDAMAAIG 124 >gi|253702440|ref|YP_003023629.1| helicase c2 [Geobacter sp. M21] gi|251777290|gb|ACT19871.1| helicase c2 [Geobacter sp. M21] Length = 830 Score = 37.3 bits (86), Expect = 0.66, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 10/76 (13%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D+ I++ E +RG D VP + + +++HNHPSGN PS DI + Sbjct: 32 DEARIVVEVEPLARGNRDAVPAI--------MIACSFGDVVIHNHPSGNLTPSQPDIEIA 83 Query: 64 QNIITTLNPLNIIVHD 79 + + + D Sbjct: 84 SLLGN--QGVGFYIVD 97 >gi|255006439|ref|ZP_05145040.2| hypothetical protein SauraM_08220 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|295406775|ref|ZP_06816580.1| conserved hypothetical protein [Staphylococcus aureus A8819] gi|297245642|ref|ZP_06929507.1| conserved hypothetical protein [Staphylococcus aureus A8796] gi|294968522|gb|EFG44546.1| conserved hypothetical protein [Staphylococcus aureus A8819] gi|297177293|gb|EFH36545.1| conserved hypothetical protein [Staphylococcus aureus A8796] gi|315195557|gb|EFU25944.1| hypothetical protein CGSSa00_07820 [Staphylococcus aureus subsp. aureus CGS00] Length = 31 Score = 37.3 bits (86), Expect = 0.68, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 12/25 (48%) Query: 72 PLNIIVHDHIIIGKDAFVSFKGLRI 96 L I + DHIIIG + F S Sbjct: 2 ILGIDLLDHIIIGDNRFTSLVEAGY 26 >gi|77917641|ref|YP_355456.1| Rad3-related DNA helicases [Pelobacter carbinolicus DSM 2380] gi|77543724|gb|ABA87286.1| Rad3-related DNA helicase [Pelobacter carbinolicus DSM 2380] Length = 851 Score = 37.3 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 8/63 (12%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D ++ +V +RG VP ++E + +++HNHPS PS AD+ + Sbjct: 32 DADLRVVQVQVLARGNGSAVPAIVQEC-RY-------GDVVIHNHPSACLEPSMADLEIA 83 Query: 64 QNI 66 + Sbjct: 84 SRL 86 >gi|78224358|ref|YP_386105.1| helicase c2 [Geobacter metallireducens GS-15] gi|78195613|gb|ABB33380.1| Helicase c2 [Geobacter metallireducens GS-15] Length = 876 Score = 37.3 bits (86), Expect = 0.71, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 15/76 (19%) Query: 7 NILIAD-EVQSRGTIDHVPVYIREIVQRCLELSATSI--ILVHNHPSGNPNPSDADINMT 63 N ++ + E +RG D V + ATS +++HNHPSGN +PS ADI + Sbjct: 71 NRIVTEAEPLARGNRDAV----------AAIMIATSFGDVVIHNHPSGNLDPSQADIEIA 120 Query: 64 QNIITTLNPLNIIVHD 79 + + + D Sbjct: 121 SLLGN--QGVGFSIVD 134 >gi|259157198|gb|ACV96810.1| RadC [uncultured bacterium] Length = 35 Score = 37.0 bits (85), Expect = 0.95, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 24/35 (68%) Query: 9 LIADEVQSRGTIDHVPVYIREIVQRCLELSATSII 43 +I GT++HV V+ REI++ ++++A+++I Sbjct: 1 IITHRRLFSGTLNHVEVHPREIIREAIKINASALI 35 >gi|197120131|ref|YP_002140558.1| ATP-dependent DNA helicase DinG [Geobacter bemidjiensis Bem] gi|197089491|gb|ACH40762.1| ATP-dependent DNA helicase DinG [Geobacter bemidjiensis Bem] Length = 830 Score = 36.6 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 8/63 (12%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D+ I++ E +RG D VP + + +++HNHPSGN PS DI + Sbjct: 32 DEARIVVEVEPLARGNRDAVPAI--------MIACSFGDVVIHNHPSGNLTPSQPDIEIA 83 Query: 64 QNI 66 + Sbjct: 84 SLL 86 >gi|327484363|gb|AEA78770.1| DNA repair protein RadC [Vibrio cholerae LMA3894-4] Length = 44 Score = 36.6 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 21/30 (70%) Query: 24 PVYIREIVQRCLELSATSIILVHNHPSGNP 53 PV +E ++ L ++A ++I HNHPSG+P Sbjct: 3 PVSTQERLKEALNVNAAAVIFAHNHPSGDP 32 >gi|220931636|ref|YP_002508544.1| helicase c2 [Halothermothrix orenii H 168] gi|219992946|gb|ACL69549.1| helicase c2 [Halothermothrix orenii H 168] Length = 822 Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 10/72 (13%) Query: 8 ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNII 67 ++ + +RG + VP I ++ ++VHNHPS + PS ADI + + Sbjct: 39 KIMDYTLLARGNLKMVPAIISDL--------KPGQVIVHNHPSSDLTPSAADIRIASRMG 90 Query: 68 TTLNPLNIIVHD 79 + I+ D Sbjct: 91 N--QGIGFIIID 100 >gi|111019688|ref|YP_702660.1| enoyl-CoA hydratase [Rhodococcus jostii RHA1] gi|110819218|gb|ABG94502.1| possible enoyl-CoA hydratase [Rhodococcus jostii RHA1] Length = 270 Score = 36.2 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 3/54 (5%) Query: 44 LVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKD---AFVSFKGL 94 + P AD+ ++ ++ L I + DH+I+ + A VS+ Sbjct: 143 ISWLLPRLVGRSRAADLLLSSRMVDAEEALRIGLVDHLIVDGNVLAAAVSYAQQ 196 >gi|169836601|ref|ZP_02869789.1| hypothetical protein cdivTM_05775 [candidate division TM7 single-cell isolate TM7a] Length = 36 Score = 36.2 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 13/26 (50%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVY 26 +FL+ N L+ +E GT +Y Sbjct: 1 MFLNTQNELLKEEELFFGTRTEARLY 26 >gi|322421670|ref|YP_004200893.1| helicase c2 [Geobacter sp. M18] gi|320128057|gb|ADW15617.1| helicase c2 [Geobacter sp. M18] Length = 833 Score = 35.8 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 8/63 (12%) Query: 4 DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63 D+ +++ E +RG D VP + + +++HNHPSG PS DI + Sbjct: 32 DEARVVVEVEPLARGNKDAVPAI--------MIACSFGDVVIHNHPSGYLTPSQPDIEIA 83 Query: 64 QNI 66 + Sbjct: 84 SLL 86 >gi|148266132|ref|YP_001232838.1| helicase c2 [Geobacter uraniireducens Rf4] gi|146399632|gb|ABQ28265.1| helicase c2 [Geobacter uraniireducens Rf4] Length = 843 Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 12/72 (16%) Query: 9 LIADEVQSRGTIDHVPVYIREIVQRCLELSAT-SIILVHNHPSGNPNPSDADINMTQNII 67 +I E +RG D V + ++A+ +++HNHPSG PS AD+ + + Sbjct: 37 VIDAEPLARGNRDAVA---------AIMIAASFGDVVIHNHPSGILTPSRADLEIASLLG 87 Query: 68 TTLNPLNIIVHD 79 + + D Sbjct: 88 N--QGVGFYIID 97 >gi|254168308|ref|ZP_04875154.1| hypothetical protein ABOONEI_2834 [Aciduliprofundum boonei T469] gi|254168431|ref|ZP_04875276.1| hypothetical protein ABOONEI_353 [Aciduliprofundum boonei T469] gi|289595755|ref|YP_003482451.1| hypothetical protein Aboo_0077 [Aciduliprofundum boonei T469] gi|197622712|gb|EDY35282.1| hypothetical protein ABOONEI_353 [Aciduliprofundum boonei T469] gi|197622817|gb|EDY35386.1| hypothetical protein ABOONEI_2834 [Aciduliprofundum boonei T469] gi|289533542|gb|ADD07889.1| conserved hypothetical protein [Aciduliprofundum boonei T469] Length = 123 Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 12/83 (14%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61 FL + +I + + GT+ + ++ + ++ + + H+HPSG P PS AD++ Sbjct: 30 FLRAKHNIIYEIILLPGTVSGGSSVLYNLLMKPIDFTIVGSV--HSHPSGFPIPSRADLD 87 Query: 62 MTQNIITTLNPLNIIVHDHIIIG 84 M HII+ Sbjct: 88 MFSKTGDV----------HIIVA 100 >gi|327192093|gb|EGE59071.1| hypothetical protein RHECNPAF_248005 [Rhizobium etli CNPAF512] Length = 41 Score = 35.8 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 20/36 (55%), Positives = 24/36 (66%) Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ II L+IIVHD IIIGK+ V KGL +I Sbjct: 1 MTKVIIDAAKALDIIVHDQIIIGKNGHVGLKGLTLI 36 >gi|320645640|gb|EFX14645.1| DNA repair protein, RadC family [Escherichia coli O157:H- str. 493-89] Length = 87 Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 11/19 (57%) Query: 1 LFLDKHNILIADEVQSRGT 19 L+L+ N LIA E GT Sbjct: 62 LYLNNQNQLIAGETLFTGT 80 >gi|218510680|ref|ZP_03508558.1| DNA repair protein RadC [Rhizobium etli Brasil 5] Length = 41 Score = 35.8 bits (82), Expect = 2.1, Method: Composition-based stats. Identities = 20/36 (55%), Positives = 24/36 (66%) Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ II L+IIVHD IIIGK+ V KGL +I Sbjct: 1 MTKVIIDAAKALDIIVHDQIIIGKNGHVGLKGLTLI 36 >gi|307269918|ref|ZP_07551244.1| DNA repair protein RadC family protein [Enterococcus faecalis TX4248] gi|312899721|ref|ZP_07759044.1| DNA repair protein RadC family protein [Enterococcus faecalis TX0470] gi|306513708|gb|EFM82314.1| DNA repair protein RadC family protein [Enterococcus faecalis TX4248] gi|311293153|gb|EFQ71709.1| DNA repair protein RadC family protein [Enterococcus faecalis TX0470] Length = 181 Score = 35.8 bits (82), Expect = 2.3, Method: Composition-based stats. Identities = 6/34 (17%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Query: 1 LFLDKHNILIADEVQSRGTIDHVP---VYIREIV 31 ++L+ N +I + +G+++ +Y++ I Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSVNNTMYLKFIF 174 >gi|255658317|ref|ZP_05403726.1| putative GTP-binding protein HflX [Mitsuokella multacida DSM 20544] gi|260849636|gb|EEX69643.1| putative GTP-binding protein HflX [Mitsuokella multacida DSM 20544] Length = 615 Score = 35.4 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 6/77 (7%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 ++L++ ++ S G D V + E R E T I +H HPSG+ S+ D+ Sbjct: 53 VYLNRQGKVL---QVSVGDTDT--VDLPEFKSRRAEGKLTGIRCIHTHPSGDTRLSEPDL 107 Query: 61 NMTQNII-TTLNPLNII 76 + + + + + Sbjct: 108 SSLRRLRFDCMAAIGFR 124 >gi|257080642|ref|ZP_05575003.1| predicted protein [Enterococcus faecalis E1Sol] gi|256988672|gb|EEU75974.1| predicted protein [Enterococcus faecalis E1Sol] Length = 186 Score = 35.4 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 6/34 (17%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Query: 1 LFLDKHNILIADEVQSRGTIDHVP---VYIREIV 31 ++L+ N +I + +G+++ +Y++ I Sbjct: 146 IYLNTKNDIIQQKTIFKGSLNQSVNNTMYLKFIF 179 >gi|312888475|ref|ZP_07748048.1| riboflavin biosynthesis protein RibF [Mucilaginibacter paludis DSM 18603] gi|311299052|gb|EFQ76148.1| riboflavin biosynthesis protein RibF [Mucilaginibacter paludis DSM 18603] Length = 307 Score = 35.4 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 5/82 (6%) Query: 8 ILIADEVQSRGTIDHVPVYIREIVQR----CLELSATSIILVHN-HPSGNPNPSDADINM 62 LI + V + GT D V R+I+ + E ++IL HP NP D + M Sbjct: 11 KLITNAVVTIGTFDGVHTGHRKIIAKLQELAQECGGETVILTFFPHPRMILNPEDQSLKM 70 Query: 63 TQNIITTLNPLNIIVHDHIIIG 84 I L + DH+I+ Sbjct: 71 ITTINEKAELLEGLGVDHLIVT 92 >gi|255533430|ref|YP_003093802.1| riboflavin biosynthesis protein RibF [Pedobacter heparinus DSM 2366] gi|255346414|gb|ACU05740.1| riboflavin biosynthesis protein RibF [Pedobacter heparinus DSM 2366] Length = 311 Score = 35.0 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%) Query: 17 RGTIDHVPVYIREIVQRCLELSAT----SIILVHN-HPSGNPNPSDADINMTQNIITTLN 71 GT D V ++I++R EL+ S+IL HP +P + D+ M I Sbjct: 20 IGTFDGVHYGHQKIIKRLCELARATGGESVILTFFPHPRLIIDPENQDLKMINTIDEKAK 79 Query: 72 PLNIIVHDHIIIG 84 L + DH+II Sbjct: 80 ILAALGVDHLIIT 92 >gi|310779145|ref|YP_003967478.1| helicase c2 [Ilyobacter polytropus DSM 2926] gi|309748468|gb|ADO83130.1| helicase c2 [Ilyobacter polytropus DSM 2926] Length = 815 Score = 35.0 bits (80), Expect = 3.7, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 8/52 (15%) Query: 11 ADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 E+ +RG + VP ++++ +R +++HNHPSG PSDAD+ + Sbjct: 41 HVEILARGNKNSVPAIMKQMKKR--------EVIIHNHPSGYLYPSDADVQI 84 >gi|39995471|ref|NP_951422.1| ATP-dependent helicase DinG [Geobacter sulfurreducens PCA] gi|39982234|gb|AAR33695.1| ATP-dependent helicase DinG [Geobacter sulfurreducens PCA] gi|307634692|gb|ADI83194.2| ATP-dependent DNA helicase DinG [Geobacter sulfurreducens KN400] Length = 840 Score = 35.0 bits (80), Expect = 3.8, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 14/73 (19%) Query: 9 LIADEVQSRGTIDHVPVYIREIVQRCLELSATSI--ILVHNHPSGNPNPSDADINMTQNI 66 ++ E +RG D V + ATS +++HNHPSG PS AD+ + + Sbjct: 37 VVEVEPLARGNRDAV----------AAIMIATSFGDVVIHNHPSGVLTPSQADVEIASLL 86 Query: 67 ITTLNPLNIIVHD 79 + + D Sbjct: 87 GN--QGVGFSIID 97 >gi|121533669|ref|ZP_01665496.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1] gi|121307660|gb|EAX48575.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1] Length = 597 Score = 34.6 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 6/77 (7%) Query: 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60 L+L++ +I + G + V + + R + + +H HPSG+ SD D+ Sbjct: 54 LYLNRRGQVIR---VAIG--NATTVDLPQANGRHALNRLSGLRCLHTHPSGDSRLSDVDL 108 Query: 61 NMTQNII-TTLNPLNII 76 + + + L + Sbjct: 109 ASLREMRFDLMAALGVE 125 >gi|307718257|ref|YP_003873789.1| hypothetical protein STHERM_c05470 [Spirochaeta thermophila DSM 6192] gi|306531982|gb|ADN01516.1| hypothetical protein STHERM_c05470 [Spirochaeta thermophila DSM 6192] Length = 812 Score = 34.6 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + EV SRG ++ P +R + + +++HNHPSG PS AD+++ Sbjct: 36 LDGAGTVDRVEVVSRGDVESAPAVLRHLERV--------DVVIHNHPSGVLAPSKADLSV 87 Query: 63 TQNIITTLNPLNIIVHD 79 + + + D Sbjct: 88 AGILGE--EGVGFYIVD 102 >gi|91203183|emb|CAJ72822.1| similar to ATP-dependent DNA helicase (DNA-damage-inducible protein G) [Candidatus Kuenenia stuttgartiensis] Length = 847 Score = 34.6 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 9/66 (13%) Query: 7 NILIAD-EVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQN 65 N +IAD EV + G + VP +RE+ +++HNHP+GN PS+ DI + Sbjct: 41 NYMIADIEVYAMGNKNAVPAILREV--------KHGEVIIHNHPNGNLTPSEEDIEVASE 92 Query: 66 IITTLN 71 + + Sbjct: 93 MGSLGA 98 >gi|257076688|ref|ZP_05571049.1| Mov34/MPN/PAD-1 family protein [Ferroplasma acidarmanus fer1] Length = 110 Score = 34.3 bits (78), Expect = 5.6, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 14/84 (16%) Query: 2 FLDKHNILIADEVQSRGTIDHVPVYIREIVQ-RCLELSATSIILVHNHPSGNPNPSDADI 60 L + +I + G+I+ + I + + L + + VH+HPSGN +PSDAD+ Sbjct: 17 LLRAEHQIIYEIALVPGSING---PVHVIFRTYTMPLDFSYVGSVHSHPSGNTHPSDADL 73 Query: 61 NMTQNIITTLNPLNIIVHDHIIIG 84 +M N HII+G Sbjct: 74 HMFSNTGPV----------HIIVG 87 >gi|315186280|gb|EFU20041.1| helicase c2 [Spirochaeta thermophila DSM 6578] Length = 809 Score = 34.3 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%) Query: 3 LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62 LD + EV SRG ++ P +R++ + +++HNHPSG PS AD+ + Sbjct: 33 LDGEGTVERVEVVSRGDVESAPAVLRQLERV--------DVVIHNHPSGVLAPSKADLAV 84 Query: 63 TQNIITTLNPLNIIVHD 79 + + + D Sbjct: 85 AGILGE--EGVGFYIVD 99 >gi|218512437|ref|ZP_03509277.1| DNA repair protein RadC [Rhizobium etli 8C-3] Length = 41 Score = 33.9 bits (77), Expect = 8.2, Method: Composition-based stats. Identities = 20/36 (55%), Positives = 23/36 (63%) Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97 MT+ II L IIVHD IIIGK+ V KGL +I Sbjct: 1 MTKVIIDAAKALAIIVHDQIIIGKNGHVGLKGLTLI 36 Database: nr Posted date: May 13, 2011 4:10 AM Number of letters in database: 999,999,932 Number of sequences in database: 2,987,209 Database: /data/usr2/db/fasta/nr.01 Posted date: May 13, 2011 4:17 AM Number of letters in database: 999,998,956 Number of sequences in database: 2,896,973 Database: /data/usr2/db/fasta/nr.02 Posted date: May 13, 2011 4:23 AM Number of letters in database: 999,999,979 Number of sequences in database: 2,907,862 Database: /data/usr2/db/fasta/nr.03 Posted date: May 13, 2011 4:29 AM Number of letters in database: 999,999,513 Number of sequences in database: 2,932,190 Database: /data/usr2/db/fasta/nr.04 Posted date: May 13, 2011 4:33 AM Number of letters in database: 792,586,372 Number of sequences in database: 2,260,650 Lambda K H 0.313 0.176 0.530 Lambda K H 0.267 0.0543 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,159,979,415 Number of Sequences: 13984884 Number of extensions: 42445749 Number of successful extensions: 114727 Number of sequences better than 10.0: 2466 Number of HSP's better than 10.0 without gapping: 2431 Number of HSP's successfully gapped in prelim test: 35 Number of HSP's that attempted gapping in prelim test: 112089 Number of HSP's gapped (non-prelim): 2473 length of query: 97 length of database: 4,792,584,752 effective HSP length: 66 effective length of query: 31 effective length of database: 3,869,582,408 effective search space: 119957054648 effective search space used: 119957054648 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 77 (33.9 bits)