BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 537021.9.peg.816_1
         (97 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done



>gi|15640247|ref|NP_229874.1| DNA repair protein RadC [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|147674401|ref|YP_001218476.1| DNA repair protein RadC [Vibrio cholerae O395]
 gi|153820026|ref|ZP_01972693.1| DNA repair protein RadC [Vibrio cholerae NCTC 8457]
 gi|227080437|ref|YP_002808988.1| DNA repair protein RadC [Vibrio cholerae M66-2]
 gi|229506982|ref|ZP_04396490.1| DNA repair protein RadC [Vibrio cholerae BX 330286]
 gi|229509352|ref|ZP_04398835.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229516299|ref|ZP_04405747.1| DNA repair protein RadC [Vibrio cholerae RC9]
 gi|229606490|ref|YP_002877138.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|254851346|ref|ZP_05240696.1| DNA repair protein RadC [Vibrio cholerae MO10]
 gi|255744029|ref|ZP_05417983.1| DNA repair protein RadC [Vibrio cholera CIRS 101]
 gi|298500859|ref|ZP_07010661.1| DNA repair protein RadC [Vibrio cholerae MAK 757]
 gi|13431812|sp|Q9KVC9|Y217_VIBCH RecName: Full=UPF0758 protein VC_0217
 gi|172047481|sp|A5F402|Y3797_VIBC3 RecName: Full=UPF0758 protein VC0395_A2597/VC395_0249
 gi|254789668|sp|C3LQH9|Y205_VIBCM RecName: Full=UPF0758 protein VCM66_0205
 gi|9654624|gb|AAF93393.1| DNA repair protein RadC [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|126509430|gb|EAZ72024.1| DNA repair protein RadC [Vibrio cholerae NCTC 8457]
 gi|146316284|gb|ABQ20823.1| DNA repair protein RadC [Vibrio cholerae O395]
 gi|227008325|gb|ACP04537.1| DNA repair protein RadC [Vibrio cholerae M66-2]
 gi|227012064|gb|ACP08274.1| DNA repair protein RadC [Vibrio cholerae O395]
 gi|229346725|gb|EEO11695.1| DNA repair protein RadC [Vibrio cholerae RC9]
 gi|229353667|gb|EEO18604.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229356087|gb|EEO21006.1| DNA repair protein RadC [Vibrio cholerae BX 330286]
 gi|229369145|gb|ACQ59568.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|254847051|gb|EET25465.1| DNA repair protein RadC [Vibrio cholerae MO10]
 gi|255738294|gb|EET93685.1| DNA repair protein RadC [Vibrio cholera CIRS 101]
 gi|297540363|gb|EFH76422.1| DNA repair protein RadC [Vibrio cholerae MAK 757]
          Length = 224

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  + I V DH ++G    VSF     I
Sbjct: 188 RITDRLRDALGLVEIRVLDHFVVGDGEVVSFAERGWI 224


>gi|254436013|ref|ZP_05049520.1| DNA repair protein RadC [Nitrosococcus oceani AFC27]
 gi|207089124|gb|EDZ66396.1| DNA repair protein RadC [Nitrosococcus oceani AFC27]
          Length = 230

 Score =  144 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A E   RGTID   V+ RE+++R L  +A ++IL HNHPSG   PS AD 
Sbjct: 134 LFLDNRHRVLAFEELFRGTIDGASVHPREVLKRALAHNAAAVILAHNHPSGVAEPSRADE 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  ++I V DHII+G    +SF    ++
Sbjct: 194 CITQRLKEALALVDIRVLDHIIVGDGETLSFAERGLL 230


>gi|37678469|ref|NP_933078.1| DNA repair protein RadC [Vibrio vulnificus YJ016]
 gi|320157667|ref|YP_004190046.1| DNA repair protein RadC [Vibrio vulnificus MO6-24/O]
 gi|326423775|ref|NP_759802.2| DNA repair protein RadC [Vibrio vulnificus CMCP6]
 gi|32129962|sp|Q8DDY0|Y825_VIBVU RecName: Full=UPF0758 protein VV1_0825
 gi|54036231|sp|Q7MPS7|Y285_VIBVY RecName: Full=UPF0758 protein VV0285
 gi|37197209|dbj|BAC93049.1| DNA repair protein [Vibrio vulnificus YJ016]
 gi|319932979|gb|ADV87843.1| DNA repair protein RadC [Vibrio vulnificus MO6-24/O]
 gi|319999137|gb|AAO09329.2| DNA repair protein RadC [Vibrio vulnificus CMCP6]
          Length = 224

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I DEV   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQNRVIKDEVMFEGTIDAASVYPREVVKRALHYNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I V DH ++G    VSF     I
Sbjct: 188 RITRRLSDALGLVDIRVLDHFVVGDGEVVSFAERGWI 224


>gi|77163771|ref|YP_342296.1| DNA repair protein RadC [Nitrosococcus oceani ATCC 19707]
 gi|123595151|sp|Q3JEI0|Y236_NITOC RecName: Full=UPF0758 protein Noc_0236
 gi|76882085|gb|ABA56766.1| DNA replication and repair protein RadC [Nitrosococcus oceani ATCC
           19707]
          Length = 224

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A E   RGTID   V+ RE+++R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNRHRVLAFEELFRGTIDGASVHPREVLKRALAHNAAAVILAHNHPSGVAEPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  ++I V DHII+G    +SF    ++
Sbjct: 188 CITQRLKEALALVDIRVLDHIIVGDGETLSFAERGLL 224


>gi|258620577|ref|ZP_05715614.1| DNA repair protein RadC [Vibrio mimicus VM573]
 gi|258625887|ref|ZP_05720762.1| DNA repair protein RadC [Vibrio mimicus VM603]
 gi|258581851|gb|EEW06725.1| DNA repair protein RadC [Vibrio mimicus VM603]
 gi|258587092|gb|EEW11804.1| DNA repair protein RadC [Vibrio mimicus VM573]
          Length = 224

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L+ + I V DH ++G    VSF     I
Sbjct: 188 RITDRLRDALSLVEIRVLDHFVVGDGEVVSFAERGWI 224


>gi|262163757|ref|ZP_06031497.1| DNA repair protein RadC [Vibrio mimicus VM223]
 gi|262027737|gb|EEY46402.1| DNA repair protein RadC [Vibrio mimicus VM223]
          Length = 224

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L+ + I V DH ++G    VSF     I
Sbjct: 188 RITDRLRDALSLVEIRVLDHFVVGDGEVVSFAERGWI 224


>gi|229524831|ref|ZP_04414236.1| DNA repair protein RadC [Vibrio cholerae bv. albensis VL426]
 gi|229338412|gb|EEO03429.1| DNA repair protein RadC [Vibrio cholerae bv. albensis VL426]
          Length = 224

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  + I V DH ++G    VSF     I
Sbjct: 188 RITGRLRDALGLVEIRVLDHFVVGDGEVVSFAERGWI 224


>gi|153800833|ref|ZP_01955419.1| DNA repair protein RadC [Vibrio cholerae MZO-3]
 gi|153825955|ref|ZP_01978622.1| DNA repair protein RadC [Vibrio cholerae MZO-2]
 gi|153831399|ref|ZP_01984066.1| DNA repair protein RadC [Vibrio cholerae 623-39]
 gi|229521064|ref|ZP_04410485.1| DNA repair protein RadC [Vibrio cholerae TM 11079-80]
 gi|229527280|ref|ZP_04416673.1| DNA repair protein RadC [Vibrio cholerae 12129(1)]
 gi|262404954|ref|ZP_06081506.1| DNA repair protein RadC [Vibrio sp. RC586]
 gi|297581670|ref|ZP_06943592.1| DNA repair protein RadC [Vibrio cholerae RC385]
 gi|124123664|gb|EAY42407.1| DNA repair protein RadC [Vibrio cholerae MZO-3]
 gi|148873120|gb|EDL71255.1| DNA repair protein RadC [Vibrio cholerae 623-39]
 gi|149740363|gb|EDM54499.1| DNA repair protein RadC [Vibrio cholerae MZO-2]
 gi|229335288|gb|EEO00772.1| DNA repair protein RadC [Vibrio cholerae 12129(1)]
 gi|229341949|gb|EEO06950.1| DNA repair protein RadC [Vibrio cholerae TM 11079-80]
 gi|262348793|gb|EEY97934.1| DNA repair protein RadC [Vibrio sp. RC586]
 gi|297534077|gb|EFH72916.1| DNA repair protein RadC [Vibrio cholerae RC385]
 gi|327483097|gb|AEA77504.1| DNA repair protein RadC [Vibrio cholerae LMA3894-4]
          Length = 224

 Score =  144 bits (364), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  + I V DH ++G    VSF     I
Sbjct: 188 RITDRLRDALGLVEIRVLDHFVVGDGEVVSFAERGWI 224


>gi|190572468|ref|YP_001970313.1| DNA repair protein RadC [Stenotrophomonas maltophilia K279a]
 gi|229485565|sp|B2FJW1|Y399_STRMK RecName: Full=UPF0758 protein Smlt0399
 gi|190010390|emb|CAQ43998.1| putative DNA repair protein RadC [Stenotrophomonas maltophilia
           K279a]
          Length = 234

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E    GTI+  PVY RE+V+R L  +A ++IL HNHPSG+P PS AD 
Sbjct: 129 LFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSSADT 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ + DH ++G+   VSF    ++
Sbjct: 189 RITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225


>gi|194364059|ref|YP_002026669.1| DNA repair protein RadC [Stenotrophomonas maltophilia R551-3]
 gi|238693502|sp|B4STE3|Y281_STRM5 RecName: Full=UPF0758 protein Smal_0281
 gi|194346863|gb|ACF49986.1| DNA repair protein RadC [Stenotrophomonas maltophilia R551-3]
          Length = 234

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E    GTI+  PVY RE+V+R L  +A ++IL HNHPSG+P PS AD 
Sbjct: 129 LFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSSADT 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ + DH ++G+   VSF    ++
Sbjct: 189 RITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225


>gi|260770727|ref|ZP_05879657.1| DNA repair protein RadC [Vibrio furnissii CIP 102972]
 gi|260614308|gb|EEX39497.1| DNA repair protein RadC [Vibrio furnissii CIP 102972]
 gi|315178477|gb|ADT85391.1| DNA repair protein RadC [Vibrio furnissii NCTC 11218]
          Length = 224

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DEV   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS +D 
Sbjct: 128 LFLDNQHRVIRDEVLFEGTIDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSTSDR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I V DH ++G    VSF     I
Sbjct: 188 RITRRLTDALALVDIRVLDHFVVGDGEVVSFAERGWI 224


>gi|261210491|ref|ZP_05924785.1| DNA repair protein RadC [Vibrio sp. RC341]
 gi|260840549|gb|EEX67115.1| DNA repair protein RadC [Vibrio sp. RC341]
          Length = 224

 Score =  143 bits (362), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  + I V DH +IG    VSF     I
Sbjct: 188 RITDRLRDALGLVEIRVLDHFVIGDGEVVSFAERGWI 224


>gi|254522249|ref|ZP_05134304.1| DNA repair protein [Stenotrophomonas sp. SKA14]
 gi|219719840|gb|EED38365.1| DNA repair protein [Stenotrophomonas sp. SKA14]
          Length = 246

 Score =  143 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E    GTI+  PVY RE+V+R L  +A ++IL HNHPSG+P PS AD 
Sbjct: 141 LFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSGADT 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ + DH ++G+   VSF    ++
Sbjct: 201 RITDELQQALALVDVRLLDHFVVGEGRPVSFAERGLL 237


>gi|262172690|ref|ZP_06040368.1| DNA repair protein RadC [Vibrio mimicus MB-451]
 gi|261893766|gb|EEY39752.1| DNA repair protein RadC [Vibrio mimicus MB-451]
          Length = 224

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHNNAAAVILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L+ + I V DH ++G    VSF     I
Sbjct: 188 RITDRLRDALSLVEIRVLDHFVVGDGEVVSFAERGWI 224


>gi|260774468|ref|ZP_05883382.1| DNA repair protein RadC [Vibrio metschnikovii CIP 69.14]
 gi|260610595|gb|EEX35800.1| DNA repair protein RadC [Vibrio metschnikovii CIP 69.14]
          Length = 224

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 45/97 (46%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  EV   GTID   VY RE+V+R L+L+A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIQGEVLFEGTIDAASVYPREVVKRALQLNAAALILAHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++  L  ++I V DH +IG    VSF     I
Sbjct: 188 RITQRLVDALQLVDIRVLDHFVIGDGEVVSFAERGWI 224


>gi|163803269|ref|ZP_02197148.1| DNA repair protein RadC [Vibrio sp. AND4]
 gi|159172906|gb|EDP57744.1| DNA repair protein RadC [Vibrio sp. AND4]
          Length = 224

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I  L  ++I + DH +IG    VSF     I
Sbjct: 188 RITRRLIDALALVDIRILDHFVIGDGESVSFAERGWI 224


>gi|269959366|ref|ZP_06173749.1| DNA repair protein RadC [Vibrio harveyi 1DA3]
 gi|269835803|gb|EEZ89879.1| DNA repair protein RadC [Vibrio harveyi 1DA3]
          Length = 224

 Score =  142 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I  L  ++I + DH +IG    VSF     I
Sbjct: 188 RITRRLIDALALVDIRILDHFVIGDGESVSFAERGWI 224


>gi|260902399|ref|ZP_05910794.1| DNA repair protein RadC [Vibrio parahaemolyticus AQ4037]
 gi|308110861|gb|EFO48401.1| DNA repair protein RadC [Vibrio parahaemolyticus AQ4037]
          Length = 224

 Score =  142 bits (359), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I  L  ++I + DH +IG    VSF     I
Sbjct: 188 RITRRLIDALALVDIRILDHFVIGDGESVSFAERGWI 224


>gi|156972975|ref|YP_001443882.1| DNA repair protein RadC [Vibrio harveyi ATCC BAA-1116]
 gi|166218799|sp|A7MSP7|Y653_VIBHB RecName: Full=UPF0758 protein VIBHAR_00653
 gi|156524569|gb|ABU69655.1| hypothetical protein VIBHAR_00653 [Vibrio harveyi ATCC BAA-1116]
          Length = 224

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I  L  ++I + DH +IG    VSF     I
Sbjct: 188 RITRRLIDALGLVDIRILDHFVIGDGESVSFAERGWI 224


>gi|218708245|ref|YP_002415866.1| DNA repair protein RadC [Vibrio splendidus LGP32]
 gi|254789669|sp|B7VHK2|Y182_VIBSL RecName: Full=UPF0758 protein VS_0182
 gi|218321264|emb|CAV17214.1| DNA repair protein radC homolog [Vibrio splendidus LGP32]
          Length = 224

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I DEV   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQNRVIKDEVMFEGTIDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G    +SF     I
Sbjct: 188 RITRRLTDALALVDIRILDHFVVGDGEVISFAERGWI 224


>gi|28896958|ref|NP_796563.1| DNA repair protein RadC [Vibrio parahaemolyticus RIMD 2210633]
 gi|260877858|ref|ZP_05890213.1| DNA repair protein RadC [Vibrio parahaemolyticus AN-5034]
 gi|260898016|ref|ZP_05906512.1| DNA repair protein RadC [Vibrio parahaemolyticus Peru-466]
 gi|31076907|sp|Q87T86|Y184_VIBPA RecName: Full=UPF0758 protein VP0184
 gi|28805166|dbj|BAC58447.1| DNA repair protein RadC [Vibrio parahaemolyticus RIMD 2210633]
 gi|308089340|gb|EFO39035.1| DNA repair protein RadC [Vibrio parahaemolyticus Peru-466]
 gi|308089972|gb|EFO39667.1| DNA repair protein RadC [Vibrio parahaemolyticus AN-5034]
 gi|328471754|gb|EGF42631.1| hypothetical protein VP10329_01325 [Vibrio parahaemolyticus 10329]
          Length = 224

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I  L  ++I + DH +IG    VSF     I
Sbjct: 188 RITRRLIDALALVDIRILDHFVIGDGESVSFAERGWI 224


>gi|262168070|ref|ZP_06035769.1| DNA repair protein RadC [Vibrio cholerae RC27]
 gi|262023603|gb|EEY42305.1| DNA repair protein RadC [Vibrio cholerae RC27]
          Length = 151

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 55  LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 114

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  + I V DH ++G    VSF     I
Sbjct: 115 RITDRLRDALGLVEIRVLDHFVVGDGEVVSFAERGWI 151


>gi|260779661|ref|ZP_05888551.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604470|gb|EEX30774.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450]
          Length = 220

 Score =  141 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DEV   GTID   +Y RE+V+R LE +A ++IL HNHPSG   PS AD 
Sbjct: 124 LFLDNQHRVIKDEVMFEGTIDAASIYPREVVKRALEHNAAALILAHNHPSGVAEPSQADR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I   L  ++I + DH ++G    +SF     I
Sbjct: 184 RITQRISDALALVDIRILDHFVVGDGDVISFAERGWI 220


>gi|262392595|ref|YP_003284449.1| DNA repair protein RadC [Vibrio sp. Ex25]
 gi|262336189|gb|ACY49984.1| DNA repair protein RadC [Vibrio sp. Ex25]
          Length = 224

 Score =  141 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH +IG    VSF     I
Sbjct: 188 RITRRLTDALALVDIRILDHFVIGDGESVSFAERGWI 224


>gi|88813088|ref|ZP_01128330.1| DNA repair protein RadC [Nitrococcus mobilis Nb-231]
 gi|88789721|gb|EAR20846.1| DNA repair protein RadC [Nitrococcus mobilis Nb-231]
          Length = 224

 Score =  141 bits (357), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGTID   VY RE+V+R LE +A ++I+ HNHPSG   PS AD 
Sbjct: 128 LFLDNRNRLIAFEELFRGTIDAASVYPREVVRRALERNAAALIVAHNHPSGVSEPSRADA 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  ++I + DH ++G    VS     ++
Sbjct: 188 MLTQRLREALALVDIRLLDHFVVGDSEVVSLAERGLM 224


>gi|269965912|ref|ZP_06180005.1| DNA repair protein RadC [Vibrio alginolyticus 40B]
 gi|269829465|gb|EEZ83706.1| DNA repair protein RadC [Vibrio alginolyticus 40B]
          Length = 214

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 118 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH +IG    VSF     +
Sbjct: 178 RITRRLTDALALVDIRILDHFVIGDGESVSFAERGWM 214


>gi|153009239|ref|YP_001370454.1| DNA repair protein RadC [Ochrobactrum anthropi ATCC 49188]
 gi|229470322|sp|A6X071|Y1909_OCHA4 RecName: Full=UPF0758 protein Oant_1909
 gi|151561127|gb|ABS14625.1| DNA repair protein RadC [Ochrobactrum anthropi ATCC 49188]
          Length = 249

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/97 (64%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     LNI VHDH+I+GK    SF+GL +I
Sbjct: 213 DMTKQLVNAAKALNITVHDHVIVGKHGHASFRGLGLI 249


>gi|292493862|ref|YP_003529301.1| DNA repair protein RadC [Nitrosococcus halophilus Nc4]
 gi|291582457|gb|ADE16914.1| DNA repair protein RadC [Nitrosococcus halophilus Nc4]
          Length = 224

 Score =  140 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A E   RGTID   V+ RE+++R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNRHRVLAFEELFRGTIDGASVHPREVIKRALAHNAAAVILAHNHPSGVAEPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +  TL  ++I V DHII+G    +SF    ++
Sbjct: 188 LITQRLKETLALVDIRVLDHIIVGDGETLSFAERGLL 224


>gi|152977701|ref|YP_001343330.1| DNA repair protein RadC [Actinobacillus succinogenes 130Z]
 gi|171472902|sp|A6VK98|Y013_ACTSZ RecName: Full=UPF0758 protein Asuc_0013
 gi|150839424|gb|ABR73395.1| DNA repair protein RadC [Actinobacillus succinogenes 130Z]
          Length = 220

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E   RGTI+   VY REI++  L  +A ++IL HNHPSG+  PS +D 
Sbjct: 124 LFLDNQHRLIKKEDMFRGTINAASVYPREIIKTALYCNAAALILAHNHPSGSAEPSASDK 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I      + I V DH +IGK  + SF     +
Sbjct: 184 QMTKRIQAAAELMEIRVLDHFVIGKGCYFSFAEQDWL 220


>gi|119385035|ref|YP_916091.1| DNA repair protein RadC [Paracoccus denitrificans PD1222]
 gi|171704472|sp|A1B4F1|Y2304_PARDP RecName: Full=UPF0758 protein Pden_2304
 gi|119374802|gb|ABL70395.1| DNA repair protein RadC [Paracoccus denitrificans PD1222]
          Length = 263

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 56/97 (57%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LIADE Q+RGT+DHVPVY REI++R LELSA+++ILVHNHPSG+P PS ADI
Sbjct: 167 LYLDRKNVLIADEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQADI 226

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I+     + I VHDH+IIG+   +SF+   ++
Sbjct: 227 GMTNRIVAAAEVMGIAVHDHLIIGRSRELSFRSEGLL 263


>gi|307825840|ref|ZP_07656056.1| DNA repair protein RadC [Methylobacter tundripaludum SV96]
 gi|307733148|gb|EFO04009.1| DNA repair protein RadC [Methylobacter tundripaludum SV96]
          Length = 224

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +   RGTID   VY RE+ ++ L  +A ++I  HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIQLDELFRGTIDGASVYPREVAKQALRHNAAAVIFAHNHPSGISEPSQADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L   +I V DH IIG     SF    ++
Sbjct: 188 HITEKLKQALALFDIRVLDHFIIGDGQPYSFAEHGLL 224


>gi|311696212|gb|ADP99085.1| DNA repair protein RadC-like protein [marine bacterium HP15]
          Length = 224

 Score =  140 bits (353), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I      RGTID   VY RE+V++ LE +A ++I  HNHPSG   PS ADI
Sbjct: 128 LFLDNRHRVIQYRELFRGTIDGAAVYPREVVRQALEDNAAAVIFAHNHPSGVAEPSQADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  ++I V DH+++G    VS     ++
Sbjct: 188 SLTRRLKEALGLVDIRVLDHMVVGHGEVVSLAERGLL 224


>gi|209966646|ref|YP_002299561.1| DNA repair protein RadC, putative [Rhodospirillum centenum SW]
 gi|209960112|gb|ACJ00749.1| DNA repair protein RadC, putative [Rhodospirillum centenum SW]
          Length = 259

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 61/97 (62%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ RGT+DH PVY RE+V+R LEL+AT++ILVHNHPSG+P PS ADI
Sbjct: 163 LFLDRKNTLIADEVQQRGTVDHTPVYPREVVKRALELNATALILVHNHPSGDPTPSRADI 222

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II     L ++VHDH+IIGK   VSFK + ++
Sbjct: 223 EMTKQIIQAATALGVVVHDHVIIGKGRHVSFKSIGLM 259


>gi|296535628|ref|ZP_06897807.1| DNA repair protein RadC [Roseomonas cervicalis ATCC 49957]
 gi|296264052|gb|EFH10498.1| DNA repair protein RadC [Roseomonas cervicalis ATCC 49957]
          Length = 297

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 52/97 (53%), Positives = 69/97 (71%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIADE Q+RGT++H PVY RE+++R LEL AT++ILVHNHPSG+P PS ADI
Sbjct: 201 LFLDSKNRLIADEAQARGTVNHTPVYPREVLRRALELHATALILVHNHPSGDPTPSSADI 260

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I       ++++HDH+IIG     SF+   ++
Sbjct: 261 EMTGEIRRAAQVFSVVLHDHLIIGNGRHFSFRREHLL 297


>gi|239832168|ref|ZP_04680497.1| DNA repair protein RadC [Ochrobactrum intermedium LMG 3301]
 gi|239824435|gb|EEQ96003.1| DNA repair protein RadC [Ochrobactrum intermedium LMG 3301]
          Length = 249

 Score =  139 bits (352), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 61/97 (62%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N +IADEVQ  GT+D+ PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKMIADEVQQTGTVDYTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     LNI VHDH+I+GK    SF+GL +I
Sbjct: 213 DMTRQLVNAAKALNITVHDHVIVGKHGHASFRGLGLI 249


>gi|113460290|ref|YP_718349.1| DNA repair protein RadC [Haemophilus somnus 129PT]
 gi|170719078|ref|YP_001783364.1| DNA repair protein RadC [Haemophilus somnus 2336]
 gi|123031084|sp|Q0I0X9|Y144_HAES1 RecName: Full=UPF0758 protein HS_0144
 gi|189029396|sp|B0UUW7|Y009_HAES2 RecName: Full=UPF0758 protein HSM_0009
 gi|112822333|gb|ABI24422.1| DNA repair protein [Haemophilus somnus 129PT]
 gi|168827207|gb|ACA32578.1| DNA repair protein RadC [Haemophilus somnus 2336]
          Length = 222

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS AD 
Sbjct: 126 LFLDNQHRLIKKEEMFLGTINQANVYPREIIKTALFCNAAALILAHNHPSGVSTPSMADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+NI      + I V DH IIGK  + SF     I
Sbjct: 186 KMTENIKQLSELMEIRVLDHFIIGKGNYFSFAEQGWI 222


>gi|192360376|ref|YP_001983975.1| DNA repair protein RadC [Cellvibrio japonicus Ueda107]
 gi|238692434|sp|B3PG68|Y3522_CELJU RecName: Full=UPF0758 protein CJA_3522
 gi|190686541|gb|ACE84219.1| DNA repair protein RadC [Cellvibrio japonicus Ueda107]
          Length = 224

 Score =  139 bits (350), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   +GTID   VY RE+V++ L  +A ++I  HNHPSG   PS ADI
Sbjct: 128 LFLDNQNRLIAYEELFQGTIDGANVYPREVVKQALAHNAAAVIFAHNHPSGLAEPSQADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I V DH+++G    VS      +
Sbjct: 188 RITRRLQEALGLVDIRVLDHLVVGDGELVSLAERGWL 224


>gi|260599935|ref|YP_003212506.1| DNA repair protein radC [Cronobacter turicensis z3032]
 gi|260219112|emb|CBA34467.1| DNA repair protein radC homolog [Cronobacter turicensis z3032]
          Length = 220

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I       GT+ HV V+ REIV+  + L+A +IIL HNHPSG+  PS AD 
Sbjct: 124 IFLDSQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAAIILAHNHPSGHAEPSRADK 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+     ++I V DH++IG+  +VSF     I
Sbjct: 184 MVTERIVKCCQLVDIRVLDHLVIGRGEYVSFAERGWI 220


>gi|85710819|ref|ZP_01041880.1| RadC [Idiomarina baltica OS145]
 gi|85695223|gb|EAQ33160.1| RadC [Idiomarina baltica OS145]
          Length = 260

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + L+  E    GTI+  PVY RE+++  ++ +A ++IL HNHPSG   PS AD 
Sbjct: 164 LLLDSQHRLLRYEELFYGTINAAPVYPREVLKLVMQHNAAAVILAHNHPSGVAEPSQADK 223

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH +IG    VSF    +I
Sbjct: 224 RVTERLQKALALVDVALLDHFVIGSGDPVSFAERGLI 260


>gi|253575692|ref|ZP_04853028.1| DNA repair protein RadC [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845030|gb|EES73042.1| DNA repair protein RadC [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 231

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +IA E  S G+++   V+ RE+ +  ++ S+ S++  HNHPSG+P PS  DI
Sbjct: 135 LFLNTKNHIIAQETLSIGSLNASIVHPREVFRAAIKCSSASVVCAHNHPSGDPTPSPEDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +      + I V DHI+IG   FVS K   ++
Sbjct: 195 RMTRRLCEAGEIIGIDVLDHIVIGDGKFVSLKERGLM 231


>gi|121999079|ref|YP_001003866.1| DNA repair protein RadC [Halorhodospira halophila SL1]
 gi|166218781|sp|A1WZF2|Y2301_HALHL RecName: Full=UPF0758 protein Hhal_2301
 gi|121590484|gb|ABM63064.1| DNA replication and repair protein RadC [Halorhodospira halophila
           SL1]
          Length = 224

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   RGTI+   VY RE+V+R L  +A ++I+ HNHPSG   PS AD 
Sbjct: 128 LFLDNRHRVIGFEELFRGTINGASVYPRELVRRALAHNAAAVIVAHNHPSGITEPSAADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ + DH ++G    VS     ++
Sbjct: 188 ALTHRLREALGLVDVRLLDHFVVGDGEPVSLAERGVL 224


>gi|323495229|ref|ZP_08100311.1| hypothetical protein VIBR0546_16286 [Vibrio brasiliensis LMG 20546]
 gi|323310489|gb|EGA63671.1| hypothetical protein VIBR0546_16286 [Vibrio brasiliensis LMG 20546]
          Length = 222

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GTID   VY RE+V+R LE +A ++IL HNHPSG   PS +D 
Sbjct: 126 LFLDNQHRVICGEPLFQGTIDAASVYPREVVKRALEHNAAALILAHNHPSGIAEPSQSDR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II  L+ ++I V DH ++G    VSF     I
Sbjct: 186 RITRRIIDALDLVDIRVLDHFVVGDGEIVSFAERGWI 222


>gi|297581219|ref|ZP_06943143.1| DNA repair protein [Vibrio cholerae RC385]
 gi|297534535|gb|EFH73372.1| DNA repair protein [Vibrio cholerae RC385]
          Length = 169

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 74  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 133

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ ++I V DH+++GK + VSF     +
Sbjct: 134 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 169


>gi|300815950|ref|ZP_07096174.1| putative DNA repair protein RadC [Escherichia coli MS 107-1]
 gi|300531879|gb|EFK52941.1| putative DNA repair protein RadC [Escherichia coli MS 107-1]
          Length = 163

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIADE    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIADETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 163


>gi|288942684|ref|YP_003444924.1| DNA repair protein RadC [Allochromatium vinosum DSM 180]
 gi|288898056|gb|ADC63892.1| DNA repair protein RadC [Allochromatium vinosum DSM 180]
          Length = 224

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   RGTID   V+ RE+V+R ++ +A ++I  HNHPSG   PS AD+
Sbjct: 128 LFLDNRHRVIVYEELFRGTIDGASVHPREVVRRVIQTNAAAVIFAHNHPSGVAEPSQADL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHII+G     SF    ++
Sbjct: 188 RITQRLKEALALIDVRVLDHIIVGDGDGTSFAERGLL 224


>gi|82703257|ref|YP_412823.1| DNA repair protein RadC [Nitrosospira multiformis ATCC 25196]
 gi|123544109|sp|Q2Y740|Y2138_NITMU RecName: Full=UPF0758 protein Nmul_A2138
 gi|82411322|gb|ABB75431.1| DNA replication and repair protein RadC [Nitrosospira multiformis
           ATCC 25196]
          Length = 224

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +IA E   +GT+    VY RE+V+R L  +A ++I  HNHPSG   PS AD 
Sbjct: 128 IFLDARNRVIATEELFQGTLTQTSVYPREVVKRALHHNAAAVIFAHNHPSGAAEPSHADA 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ++   L  +++ V DH I+G+ A +SF    +I
Sbjct: 188 VLTQSLKQALLLVDVRVLDHFIVGRGATLSFAEQGLI 224


>gi|16130559|ref|NP_417131.1| CP4-57 prophage; predicted DNA repair protein [Escherichia coli
           str. K-12 substr. MG1655]
 gi|89109442|ref|AP_003222.1| predicted DNA repair protein [Escherichia coli str. K-12 substr.
           W3110]
 gi|170082243|ref|YP_001731563.1| CP4-57 prophage; DNA repair protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|238901798|ref|YP_002927594.1| CP4-57 prophage; putative DNA repair protein [Escherichia coli
           BW2952]
 gi|1723637|sp|P52140|YFJY_ECOLI RecName: Full=UPF0758 protein yfjY
 gi|1033138|gb|AAA79812.1| ORF_o160 [Escherichia coli str. K-12 substr. MG1655]
 gi|1788997|gb|AAC75692.1| CP4-57 prophage; predicted DNA repair protein [Escherichia coli
           str. K-12 substr. MG1655]
 gi|1800034|dbj|BAA16512.1| predicted DNA repair protein [Escherichia coli str. K12 substr.
           W3110]
 gi|169890078|gb|ACB03785.1| CP4-57 prophage; predicted DNA repair protein [Escherichia coli
           str. K-12 substr. DH10B]
 gi|238860625|gb|ACR62623.1| CP4-57 prophage; predicted DNA repair protein [Escherichia coli
           BW2952]
 gi|260448288|gb|ACX38710.1| DNA repair protein RadC [Escherichia coli DH1]
 gi|315137260|dbj|BAJ44419.1| CP4-57 prophage; putative DNA repair protein [Escherichia coli DH1]
          Length = 160

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LIA E    G+I    V+ RE+V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 64  LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160


>gi|238750801|ref|ZP_04612299.1| DNA repair protein radC [Yersinia rohdei ATCC 43380]
 gi|238710945|gb|EEQ03165.1| DNA repair protein radC [Yersinia rohdei ATCC 43380]
          Length = 235

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 139 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  ++   + L+I V DH+++G+   VSF     +
Sbjct: 199 LMTTQVVKACSLLDIRVLDHLVVGRGECVSFAERGWL 235


>gi|83643895|ref|YP_432330.1| DNA repair protein [Hahella chejuensis KCTC 2396]
 gi|123534642|sp|Q2SN69|Y1020_HAHCH RecName: Full=UPF0758 protein HCH_01020
 gi|83631938|gb|ABC27905.1| DNA repair protein [Hahella chejuensis KCTC 2396]
          Length = 224

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E   RGTID   V+ RE+V+R L+ +A +II  HNHPSG   PS +D 
Sbjct: 128 LFLDNQHRVIAYEELFRGTIDSASVHPREVVRRVLKHNAAAIIFAHNHPSGVAEPSLSDK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH+I+G    VS      I
Sbjct: 188 EITETLRKALRLVDVRVLDHMIVGDGEVVSLAERGWI 224


>gi|238785016|ref|ZP_04629013.1| DNA repair protein RadC [Yersinia bercovieri ATCC 43970]
 gi|238714057|gb|EEQ06072.1| DNA repair protein RadC [Yersinia bercovieri ATCC 43970]
          Length = 162

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   +GT++   V+ RE+V+  L  ++ +++L HNHPSG+  PS AD 
Sbjct: 64  LFLDNQNRLIAYETLFKGTVNSTEVHPREVVKAALRHNSAAVLLAHNHPSGHAEPSQADR 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++  L+ +++ V DH+++G    VSF     +
Sbjct: 124 QITDRLVNVLDLVDVRVLDHLVVGGLDIVSFAERGWL 160


>gi|219872082|ref|YP_002476457.1| DNA repair protein RadC [Haemophilus parasuis SH0165]
 gi|219692286|gb|ACL33509.1| DNA repair protein RadC [Haemophilus parasuis SH0165]
          Length = 197

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/94 (42%), Positives = 59/94 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI  E    GTI+   V+ REI++  L+ +A +I++ HNHPSGN NPS+AD 
Sbjct: 85  IFLDNQNRLIKTEKMFYGTINQASVHPREIIKEALKCNAAAILVAHNHPSGNCNPSEADR 144

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ I    + ++I   DHII+GK  + SF+  
Sbjct: 145 FLTRKIEMACDLVDIRFVDHIIVGKGDYFSFEEE 178


>gi|88705880|ref|ZP_01103589.1| radC-like protein yeeS [Congregibacter litoralis KT71]
 gi|88699951|gb|EAQ97061.1| radC-like protein yeeS [Congregibacter litoralis KT71]
          Length = 169

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A ++I  HNHPSGNP PS AD 
Sbjct: 73  LFLDSQHRLIEYTEMFRGTIDSASVYPREVVKEALRLNAAAVIFSHNHPSGNPEPSRADE 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++   DH+I+      SF    +I
Sbjct: 133 AITKRLKEALALVDVRTLDHVIVAGSDTTSFAERGLI 169


>gi|126664654|ref|ZP_01735638.1| DNA repair protein RadC [Marinobacter sp. ELB17]
 gi|126630980|gb|EBA01594.1| DNA repair protein RadC [Marinobacter sp. ELB17]
          Length = 184

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I      RGTID   VY RE+V++ LE +A ++I  HNHPSG   PS ADI
Sbjct: 88  LFLDNRHRIIHYRELFRGTIDGAAVYPREVVRQALEDNAAAVIFAHNHPSGVAEPSQADI 147

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I V DH+++G    +S     ++
Sbjct: 148 ALTKRLKDALALVDIRVLDHMVVGHGEVISLAERGLM 184


>gi|194335153|ref|YP_002019719.1| DNA repair protein RadC [Prosthecochloris aestuarii DSM 271]
 gi|194312971|gb|ACF47365.1| DNA repair protein RadC [Prosthecochloris aestuarii DSM 271]
          Length = 165

 Score =  137 bits (347), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +I  E+ SRGT++   V+ RE+ +     +A SI+L HNHPSGN  PS AD 
Sbjct: 69  LYLDTKNKIIGLEMISRGTLNASLVHPREVFKGAFLANANSIMLAHNHPSGNTEPSSADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++     L++ V DHII+G   + SF+   +I
Sbjct: 129 LVTSRLVKAGKLLDLQVLDHIIVGDKGYYSFRESGLI 165


>gi|114328318|ref|YP_745475.1| DNA repair protein radC [Granulibacter bethesdensis CGDNIH1]
 gi|114316492|gb|ABI62552.1| DNA repair protein radC [Granulibacter bethesdensis CGDNIH1]
          Length = 271

 Score =  137 bits (347), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 49/97 (50%), Positives = 70/97 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIADE+ + GT++H PVY RE+V+R LEL AT++I+VHNHPSG+P PS  DI
Sbjct: 175 LFLDNRNQLIADEILAHGTVNHAPVYPREVVKRALELHATALIVVHNHPSGDPTPSAEDI 234

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +      L++ +HDH+IIG+  + SF+   ++
Sbjct: 235 RMTRELREAGRLLSLDLHDHVIIGRHGWSSFRKQGLL 271


>gi|121727688|ref|ZP_01680783.1| DNA repair protein RadC, putative [Vibrio cholerae V52]
 gi|298498145|ref|ZP_07007952.1| DNA repair protein [Vibrio cholerae MAK 757]
 gi|121629985|gb|EAX62393.1| DNA repair protein RadC, putative [Vibrio cholerae V52]
 gi|297542478|gb|EFH78528.1| DNA repair protein [Vibrio cholerae MAK 757]
          Length = 169

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 74  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 133

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ ++I V DH+++GK + VSF     +
Sbjct: 134 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 169


>gi|114321811|ref|YP_743494.1| DNA repair protein RadC [Alkalilimnicola ehrlichii MLHE-1]
 gi|122310756|sp|Q0A583|Y2664_ALHEH RecName: Full=UPF0758 protein Mlg_2664
 gi|114228205|gb|ABI58004.1| DNA replication and repair protein RadC [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 224

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E   +GTID   VY RE+VQR L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNRHRVVRYEELFQGTIDAASVYPREVVQRALAHNAAAVILAHNHPSGVAEPSVADQ 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I V DH ++G    VSF    ++
Sbjct: 188 ALTRRLQEALGLVDIRVLDHFVVGDGRPVSFAERGLM 224


>gi|262402819|ref|ZP_06079380.1| DNA repair protein RadC [Vibrio sp. RC586]
 gi|262351601|gb|EEZ00734.1| DNA repair protein RadC [Vibrio sp. RC586]
          Length = 158

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ ++I V DH+++GK + VSF     +
Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 158


>gi|242237618|ref|YP_002985799.1| DNA repair protein RadC [Dickeya dadantii Ech703]
 gi|242129675|gb|ACS83977.1| DNA repair protein RadC [Dickeya dadantii Ech703]
          Length = 221

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  +    GTI+ V V+ RE+V+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 125 MFLDNQHHVIRYQEMFAGTINSVEVHPREVVREALKSNAAALILAHNHPSGRAEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++I+     L I V DH++IG+  +VSF     I
Sbjct: 185 RITEHIVNACRLLEIRVLDHLVIGRGEYVSFAERGWI 221


>gi|229529171|ref|ZP_04418561.1| DNA repair protein RadC [Vibrio cholerae 12129(1)]
 gi|229530051|ref|ZP_04419441.1| DNA repair protein RadC [Vibrio cholerae 12129(1)]
 gi|254285246|ref|ZP_04960211.1| DNA repair protein RadC, putative [Vibrio cholerae AM-19226]
 gi|258620000|ref|ZP_05715040.1| RadC-like protein [Vibrio mimicus VM573]
 gi|150424518|gb|EDN16454.1| DNA repair protein RadC, putative [Vibrio cholerae AM-19226]
 gi|229332945|gb|EEN98431.1| DNA repair protein RadC [Vibrio cholerae 12129(1)]
 gi|229333825|gb|EEN99311.1| DNA repair protein RadC [Vibrio cholerae 12129(1)]
 gi|258587733|gb|EEW12442.1| RadC-like protein [Vibrio mimicus VM573]
          Length = 158

 Score =  137 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ ++I V DH+++GK + VSF     +
Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 158


>gi|295695338|ref|YP_003588576.1| DNA repair protein RadC [Bacillus tusciae DSM 2912]
 gi|295410940|gb|ADG05432.1| DNA repair protein RadC [Bacillus tusciae DSM 2912]
          Length = 228

 Score =  137 bits (346), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 63/97 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + ++ +EV S GT++   V+ RE+ +  ++ +A +++ VHNHPSG+P PS  DI
Sbjct: 132 LHLDTKHRVLGEEVVSVGTLNASLVHPREVFRTAIKRNAAAVVCVHNHPSGDPTPSPEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ I+ +   L I + DH++IG+  +VS +   +I
Sbjct: 192 DVTKRIVESGRILGIDLVDHVVIGRGTYVSMRERGLI 228


>gi|146337832|ref|YP_001202880.1| DNA repair protein RadC [Bradyrhizobium sp. ORS278]
 gi|146190638|emb|CAL74640.1| DNA repair protein RadC homolog [Bradyrhizobium sp. ORS278]
          Length = 237

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 60/97 (61%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+++R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 141 LFLDKRNQLIADEVQQTGTVDHTPVYPREVIKRALELSATAIILVHNHPSGDPTPSQADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I+    PL I VHDHII+G++   S K   ++
Sbjct: 201 RMTKTIVEIAKPLGITVHDHIIVGRNGHTSLKSNGLM 237


>gi|167855900|ref|ZP_02478650.1| DNA repair protein RadC [Haemophilus parasuis 29755]
 gi|167852988|gb|EDS24252.1| DNA repair protein RadC [Haemophilus parasuis 29755]
          Length = 238

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 40/94 (42%), Positives = 59/94 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI  E    GTI+   V+ REI++  L+ +A +I++ HNHPSGN NPS+AD 
Sbjct: 126 IFLDNQNRLIKTEKMFYGTINQASVHPREIIKEALKCNAAAILVAHNHPSGNCNPSEADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ I    + ++I   DHII+GK  + SF+  
Sbjct: 186 FLTRKIEMACDLVDIRFVDHIIVGKGDYFSFEEE 219


>gi|251798399|ref|YP_003013130.1| DNA repair protein RadC [Paenibacillus sp. JDR-2]
 gi|247546025|gb|ACT03044.1| DNA repair protein RadC [Paenibacillus sp. JDR-2]
          Length = 228

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +IA E  S GT++   V+ RE+ +  ++  + SII VHNHPSG+P PS  DI
Sbjct: 132 LFLNTKNHIIARETLSVGTLNASLVHPREVFRAAVKAGSASIICVHNHPSGDPMPSPEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DH++IG   F+S K    +
Sbjct: 192 TLTKRLVEAGELMGIEVLDHLVIGDGRFISLKEHGYM 228


>gi|223041556|ref|ZP_03611757.1| DNA repair protein RadC-like protein [Actinobacillus minor 202]
 gi|223017651|gb|EEF16061.1| DNA repair protein RadC-like protein [Actinobacillus minor 202]
          Length = 221

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 60/96 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  E    GTI+   V+ RE+++  L+ +A +II+ HNHPSG   PS+AD 
Sbjct: 123 LFLDNQNRLIRTEKMFFGTINQASVHPREVIKAALKCNAAAIIIAHNHPSGECTPSEADR 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ I    + ++I   DHII+GK  + SF+  ++
Sbjct: 183 HLTRRIEMACSLVDIRFVDHIIVGKGDYFSFEEEKL 218


>gi|254490370|ref|ZP_05103559.1| DNA repair protein RadC [Methylophaga thiooxidans DMS010]
 gi|224464503|gb|EEF80763.1| DNA repair protein RadC [Methylophaga thiooxydans DMS010]
          Length = 224

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E   RGTID   VY RE+V++ L+ +A ++I  HNHPSG   PS ADI
Sbjct: 128 LFLDNQHRMIAFEELFRGTIDGASVYPREVVKQALQHNAAAVIFAHNHPSGVAEPSQADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ + + L  ++I V DHII+G D  +S   L  I
Sbjct: 188 HITRRLKSALELVDIRVLDHIIVGDDEPISMAQLGQI 224


>gi|156936195|ref|YP_001440111.1| hypothetical protein ESA_04094 [Cronobacter sakazakii ATCC BAA-894]
 gi|156534449|gb|ABU79275.1| hypothetical protein ESA_04094 [Cronobacter sakazakii ATCC BAA-894]
          Length = 255

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I       GT+ HV V+ REIV+  + L+A  IIL HNHPSG   PS AD 
Sbjct: 159 IFLDSQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADK 218

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+ +   ++I V DH++IG+  +VSF     I
Sbjct: 219 MVTERIVKSCQLVDIRVLDHLVIGRGEYVSFAERGWI 255


>gi|120556469|ref|YP_960820.1| DNA repair protein RadC [Marinobacter aquaeolei VT8]
 gi|166218785|sp|A1U6L4|Y3564_MARAV RecName: Full=UPF0758 protein Maqu_3564
 gi|120326318|gb|ABM20633.1| DNA replication and repair protein RadC [Marinobacter aquaeolei
           VT8]
          Length = 224

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I      RGTID   VY RE+V++ LE +A ++I  HNHPSG   PS ADI
Sbjct: 128 LFLDNRHRVIQYRELFRGTIDGAAVYPREVVRQALEDNAAAVIFAHNHPSGVAEPSQADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  ++I V DH++IG    +S     ++
Sbjct: 188 SLTRRLKEALGLVDIRVLDHMVIGHGEVISLAERGLM 224


>gi|330431915|gb|AEC16974.1| DNA repair protein RadC [Gallibacterium anatis UMN179]
          Length = 221

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + LI  E   +GTI+   V+ REI++  L+ +A +IIL HNHPSG   PS  DI
Sbjct: 122 LFLNNQHYLIEKETLFQGTINSTQVHPREIIKSALKYNAAAIILAHNHPSGITTPSKEDI 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      +++ V DH+IIGK+   SF    +I
Sbjct: 182 AVTEQIQQACKLIDVRVLDHLIIGKNQVFSFCEKGLI 218


>gi|153214270|ref|ZP_01949287.1| DNA repair protein RadC, putative [Vibrio cholerae 1587]
 gi|124115418|gb|EAY34238.1| DNA repair protein RadC, putative [Vibrio cholerae 1587]
          Length = 158

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ ++I V DH+++GK + VSF     +
Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 158


>gi|240948237|ref|ZP_04752623.1| DNA repair protein RadC [Actinobacillus minor NM305]
 gi|240297276|gb|EER47817.1| DNA repair protein RadC [Actinobacillus minor NM305]
          Length = 221

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  E    GTI+   V+ RE+++  L+ +A +II+ HNHPSG   PS+AD 
Sbjct: 123 LFLDNQNRLIRTEKMFFGTINQASVHPREVIKAALKCNAAAIIIAHNHPSGECTPSEADR 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ I      ++I   DHII+GK  + SF+  ++
Sbjct: 183 HLTRRIEMACGLVDIRFVDHIIVGKGDYFSFEEEKL 218


>gi|307546416|ref|YP_003898895.1| DNA repair protein RadC [Halomonas elongata DSM 2581]
 gi|307218440|emb|CBV43710.1| DNA repair protein RadC [Halomonas elongata DSM 2581]
          Length = 224

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   RGT+D   VY RE+ +R LEL A ++I  HNHPSG   PSDAD 
Sbjct: 128 LFLDSQHRVIRYESLFRGTLDSASVYPREVARRALELGAGALIFAHNHPSGVAEPSDADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L    + V DH ++G    VSF    ++
Sbjct: 188 RITERLRQALELFEVRVLDHFVVGDGEVVSFAERGLL 224


>gi|327480970|gb|AEA84280.1| RadC family DNA repair protein [Pseudomonas stutzeri DSM 4166]
          Length = 168

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A ++I  HNHPSGNP PS AD 
Sbjct: 72  LFLDAKHRLIQYVEMFRGTIDSASVYPREVVKEALRLNAAAVIFAHNHPSGNPEPSQADK 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++   DH+I+     VSF    ++
Sbjct: 132 VLTQRLKEALALVDVRSLDHVIVAGQRTVSFAERGLL 168


>gi|167832541|gb|ACA01849.1| DNA repair protein RadC [Vibrio cholerae]
          Length = 169

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 74  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 133

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ ++I V DH+++GK + VSF     +
Sbjct: 134 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 169


>gi|261494189|ref|ZP_05990691.1| DNA repair protein RadC [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495585|ref|ZP_05992031.1| DNA repair protein RadC [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308692|gb|EEY09949.1| DNA repair protein RadC [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310170|gb|EEY11371.1| DNA repair protein RadC [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 245

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 61/96 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  E    GTI+   V+ REI++R L+ +A +II+ HNHPSG+  PS++D 
Sbjct: 136 LFLDNQNRLIYKEKMFFGTINQTAVHPREIIKRALKYNAAAIIVAHNHPSGSCLPSESDR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ I      ++I   DHII+GK  + SF+  ++
Sbjct: 196 SLTKKIEMACELVDIRFVDHIIVGKGDYFSFEEEKL 231


>gi|15641789|ref|NP_231421.1| DNA repair protein RadC, putative [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121585864|ref|ZP_01675658.1| DNA repair protein RadC, putative [Vibrio cholerae 2740-80]
 gi|147674352|ref|YP_001217326.1| putative DNA repair protein RadC [Vibrio cholerae O395]
 gi|153817804|ref|ZP_01970471.1| DNA repair protein RadC, putative [Vibrio cholerae NCTC 8457]
 gi|153821150|ref|ZP_01973817.1| DNA repair protein RadC, putative [Vibrio cholerae B33]
 gi|153828539|ref|ZP_01981206.1| putative DNA repair protein RadC [Vibrio cholerae 623-39]
 gi|227081931|ref|YP_002810482.1| putative DNA repair protein RadC [Vibrio cholerae M66-2]
 gi|229508112|ref|ZP_04397617.1| DNA repair protein RadC [Vibrio cholerae BX 330286]
 gi|229511649|ref|ZP_04401128.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229518788|ref|ZP_04408231.1| DNA repair protein RadC [Vibrio cholerae RC9]
 gi|229607673|ref|YP_002878321.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|255744800|ref|ZP_05418750.1| DNA repair protein RadC [Vibrio cholera CIRS 101]
 gi|262161917|ref|ZP_06030935.1| DNA repair protein RadC [Vibrio cholerae INDRE 91/1]
 gi|262169785|ref|ZP_06037476.1| DNA repair protein RadC [Vibrio cholerae RC27]
 gi|13432022|sp|Q9KR57|Y1786_VIBCH RecName: Full=UPF0758 protein VC_1786
 gi|9656311|gb|AAF94935.1| DNA repair protein RadC, putative [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121550002|gb|EAX60020.1| DNA repair protein RadC, putative [Vibrio cholerae 2740-80]
 gi|126511624|gb|EAZ74218.1| DNA repair protein RadC, putative [Vibrio cholerae NCTC 8457]
 gi|126521346|gb|EAZ78569.1| DNA repair protein RadC, putative [Vibrio cholerae B33]
 gi|146316235|gb|ABQ20774.1| putative DNA repair protein RadC [Vibrio cholerae O395]
 gi|148875934|gb|EDL74069.1| putative DNA repair protein RadC [Vibrio cholerae 623-39]
 gi|227009819|gb|ACP06031.1| putative DNA repair protein RadC [Vibrio cholerae M66-2]
 gi|227013686|gb|ACP09896.1| putative DNA repair protein RadC [Vibrio cholerae O395]
 gi|229343477|gb|EEO08452.1| DNA repair protein RadC [Vibrio cholerae RC9]
 gi|229351614|gb|EEO16555.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229355617|gb|EEO20538.1| DNA repair protein RadC [Vibrio cholerae BX 330286]
 gi|229370328|gb|ACQ60751.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|255737271|gb|EET92666.1| DNA repair protein RadC [Vibrio cholera CIRS 101]
 gi|262022019|gb|EEY40729.1| DNA repair protein RadC [Vibrio cholerae RC27]
 gi|262028649|gb|EEY47304.1| DNA repair protein RadC [Vibrio cholerae INDRE 91/1]
          Length = 158

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ ++I V DH+++GK + VSF     +
Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 158


>gi|253690461|ref|YP_003019651.1| DNA repair protein RadC [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259551881|sp|C6DIC1|Y4100_PECCP RecName: Full=UPF0758 protein PC1_4100
 gi|251757039|gb|ACT15115.1| DNA repair protein RadC [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 221

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI+ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 125 LFLDNQHHVIRHQEMFVGTINSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+     + I V DH++IG   +VSF     I
Sbjct: 185 AITEQIVKACLLMEIRVLDHLVIGHGEYVSFAERGWI 221


>gi|267995990|gb|ACY90875.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
          Length = 279

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD 
Sbjct: 183 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 242

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     ++I V DH+IIG+  +VSF     I
Sbjct: 243 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 279


>gi|193071485|ref|ZP_03052397.1| DNA repair protein, RadC family [Escherichia coli E110019]
 gi|331668227|ref|ZP_08369078.1| putative DNA repair protein [Escherichia coli TA271]
 gi|192955207|gb|EDV85698.1| DNA repair protein, RadC family [Escherichia coli E110019]
 gi|331064545|gb|EGI36453.1| putative DNA repair protein [Escherichia coli TA271]
          Length = 158

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|281179100|dbj|BAI55430.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 163

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 163


>gi|254427947|ref|ZP_05041654.1| DNA repair protein RadC [Alcanivorax sp. DG881]
 gi|196194116|gb|EDX89075.1| DNA repair protein RadC [Alcanivorax sp. DG881]
          Length = 224

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GTID   VY RE+V+R +E +A ++IL HNHPSG   PS +D 
Sbjct: 128 LFLDNKHRLIAFEKLFQGTIDAAAVYPREVVRRAMEHNAAAVILAHNHPSGVAEPSQSDH 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  + + V DH++IG   +VS      +
Sbjct: 188 AITRRLVEALGLVEVRVLDHLVIGDGGWVSLASRGAL 224


>gi|331677904|ref|ZP_08378579.1| putative DNA repair protein [Escherichia coli H591]
 gi|195183284|dbj|BAG66823.1| conserved predicted protein [Escherichia coli O111:H-]
 gi|323936899|gb|EGB33182.1| DNA repair protein RadC [Escherichia coli E1520]
 gi|323938740|gb|EGB34987.1| DNA repair protein RadC [Escherichia coli E1520]
 gi|331074364|gb|EGI45684.1| putative DNA repair protein [Escherichia coli H591]
          Length = 163

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 163


>gi|187939929|gb|ACD39066.1| RadC family DNA repair protein [Pseudomonas aeruginosa]
          Length = 169

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 73  LFLDTQHRLIEYSELFRGTIDSASVYPRELVKEALRLNAAAVIVSHNHPSGNPEPSGADK 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++   DHII+   + +SF    +I
Sbjct: 133 VLTQRLREALALVDVRTLDHIIVAGGSTISFAERGLI 169


>gi|157149255|ref|YP_001456574.1| DNA repair protein RadC [Citrobacter koseri ATCC BAA-895]
 gi|166218775|sp|A8ARM5|Y5095_CITK8 RecName: Full=UPF0758 protein CKO_05095
 gi|157086460|gb|ABV16138.1| hypothetical protein CKO_05095 [Citrobacter koseri ATCC BAA-895]
          Length = 220

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++L+A+++IL HNHPSG   PS AD 
Sbjct: 124 IFLDARHRVIKHSRLFSGTLNHVEVHPREIIREAIKLNASAVILAHNHPSGCAEPSKADK 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     ++I V DH++IG+  +VSF     I
Sbjct: 184 LITERVVKCCQFMDIRVLDHLVIGRGEYVSFAERGWI 220


>gi|161616810|ref|YP_001590774.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|161366174|gb|ABX69942.1| hypothetical protein SPAB_04629 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 279

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT++HV V+ REIV+  ++ +A+++IL HNHPSG   PS AD 
Sbjct: 183 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKFNASAVILAHNHPSGCAEPSKADK 242

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     ++I V DH+IIG+  +VSF     I
Sbjct: 243 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 279


>gi|149376403|ref|ZP_01894165.1| DNA repair protein RadC [Marinobacter algicola DG893]
 gi|149359244|gb|EDM47706.1| DNA repair protein RadC [Marinobacter algicola DG893]
          Length = 224

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +   RGTID   VY RE+V++ LE +A ++I  HNHPSG   PS +DI
Sbjct: 128 LFLDNRHRVIRYQELFRGTIDGAAVYPREVVRQALEFNAAAVIFAHNHPSGVAEPSQSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  ++I V DH+++G    +S     ++
Sbjct: 188 SLTRRLKEALGLVDIRVLDHMVVGHGEVISLAERGLM 224


>gi|188025457|ref|ZP_02958709.2| hypothetical protein PROSTU_00459 [Providencia stuartii ATCC 25827]
 gi|188023530|gb|EDU61570.1| hypothetical protein PROSTU_00459 [Providencia stuartii ATCC 25827]
          Length = 222

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + +I+ E   RGTI+ V V+ REI++  ++++A++IIL HNHPSGNP PSDAD 
Sbjct: 126 LFLNNQHQIISYEELFRGTINRVEVHPREIIRFAMKMNASAIILAHNHPSGNPEPSDADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      + I + DH ++G    VSF     +
Sbjct: 186 QVTFRIKEACTLMGIKLLDHFVVGHKNCVSFLERGWL 222


>gi|126732884|ref|ZP_01748675.1| DNA repair protein RadC [Sagittula stellata E-37]
 gi|126706660|gb|EBA05734.1| DNA repair protein RadC [Sagittula stellata E-37]
          Length = 252

 Score =  136 bits (344), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 156 LYLDRKNVLIADERQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSAADI 215

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  I      + I+VHDH++IGK   +SF+   ++
Sbjct: 216 DMTVQIQAAAEVMGIVVHDHLVIGKSRELSFRSEGLL 252


>gi|261823583|ref|YP_003261689.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163]
 gi|261607596|gb|ACX90082.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163]
          Length = 221

 Score =  136 bits (344), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI+ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 125 LFLDNQHHVIRHQEMFVGTINSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+     + I V DH++IG   +VSF     I
Sbjct: 185 AITEQIVKACLLMEIRVLDHLVIGHGEYVSFAERGWI 221


>gi|153214714|ref|ZP_01949559.1| DNA repair protein RadC [Vibrio cholerae 1587]
 gi|124115150|gb|EAY33970.1| DNA repair protein RadC [Vibrio cholerae 1587]
          Length = 109

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 13  LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADR 72

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  + I V DH ++G    VSF     I
Sbjct: 73  RITDRLRDALGLVEIRVLDHFVVGDGEVVSFAERGWI 109


>gi|229515195|ref|ZP_04404655.1| DNA repair protein RadC [Vibrio cholerae TMA 21]
 gi|229347900|gb|EEO12859.1| DNA repair protein RadC [Vibrio cholerae TMA 21]
          Length = 158

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFTHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ ++I V DH+++GK + VSF     +
Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 158


>gi|225852775|ref|YP_002733008.1| DNA repair protein RadC [Brucella melitensis ATCC 23457]
 gi|256263739|ref|ZP_05466271.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|254764429|sp|C0RJP6|Y1330_BRUMB RecName: Full=UPF0758 protein BMEA_A1330
 gi|225641140|gb|ACO01054.1| DNA repair protein RadC [Brucella melitensis ATCC 23457]
 gi|263093798|gb|EEZ17803.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|326409305|gb|ADZ66370.1| DNA repair protein RadC [Brucella melitensis M28]
 gi|326539014|gb|ADZ87229.1| DNA repair protein RadC [Brucella melitensis M5-90]
          Length = 249

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 63/97 (64%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     LNI VHDH+IIGK    S + LR+I
Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLRSLRLI 249


>gi|187733812|ref|YP_001879774.1| DNA repair protein, RadC family [Shigella boydii CDC 3083-94]
 gi|187430804|gb|ACD10078.1| DNA repair protein, RadC family [Shigella boydii CDC 3083-94]
          Length = 158

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|126738441|ref|ZP_01754146.1| DNA repair protein RadC [Roseobacter sp. SK209-2-6]
 gi|126720240|gb|EBA16946.1| DNA repair protein RadC [Roseobacter sp. SK209-2-6]
          Length = 258

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 56/97 (57%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADE Q+ GT+DHVPVY RE+V+R LE +A ++ILVHNHPSG+P+PS +DI
Sbjct: 162 LFLDRKNRLIADEEQAEGTVDHVPVYPREVVKRALEHNACALILVHNHPSGDPSPSQSDI 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I   L+PL I +HDH+IIG  A +SF+   ++
Sbjct: 222 EMTDRIHRALHPLGIALHDHLIIGSSAELSFRSEGLL 258


>gi|17987001|ref|NP_539635.1| DNA repair protein RadC [Brucella melitensis bv. 1 str. 16M]
 gi|23502159|ref|NP_698286.1| DNA repair protein RadC [Brucella suis 1330]
 gi|62290189|ref|YP_221982.1| DNA repair protein RadC [Brucella abortus bv. 1 str. 9-941]
 gi|82700110|ref|YP_414684.1| DNA repair protein RadC [Brucella melitensis biovar Abortus 2308]
 gi|161619234|ref|YP_001593121.1| DNA repair protein RadC [Brucella canis ATCC 23365]
 gi|189024423|ref|YP_001935191.1| DNA repair protein RadC [Brucella abortus S19]
 gi|225627749|ref|ZP_03785786.1| DNA repair protein RadC [Brucella ceti str. Cudo]
 gi|237815696|ref|ZP_04594693.1| DNA repair protein RadC [Brucella abortus str. 2308 A]
 gi|254689493|ref|ZP_05152747.1| DNA repair protein RadC [Brucella abortus bv. 6 str. 870]
 gi|254693980|ref|ZP_05155808.1| DNA repair protein RadC [Brucella abortus bv. 3 str. Tulya]
 gi|254697631|ref|ZP_05159459.1| DNA repair protein RadC [Brucella abortus bv. 2 str. 86/8/59]
 gi|254702017|ref|ZP_05163845.1| DNA repair protein RadC [Brucella suis bv. 5 str. 513]
 gi|254704558|ref|ZP_05166386.1| DNA repair protein RadC [Brucella suis bv. 3 str. 686]
 gi|254710344|ref|ZP_05172155.1| DNA repair protein RadC [Brucella pinnipedialis B2/94]
 gi|254714340|ref|ZP_05176151.1| DNA repair protein RadC [Brucella ceti M644/93/1]
 gi|254717239|ref|ZP_05179050.1| DNA repair protein RadC [Brucella ceti M13/05/1]
 gi|254730521|ref|ZP_05189099.1| DNA repair protein RadC [Brucella abortus bv. 4 str. 292]
 gi|256031838|ref|ZP_05445452.1| DNA repair protein RadC [Brucella pinnipedialis M292/94/1]
 gi|256044923|ref|ZP_05447826.1| DNA repair protein RadC [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061358|ref|ZP_05451502.1| DNA repair protein RadC [Brucella neotomae 5K33]
 gi|256113838|ref|ZP_05454631.1| DNA repair protein RadC [Brucella melitensis bv. 3 str. Ether]
 gi|256257741|ref|ZP_05463277.1| DNA repair protein RadC [Brucella abortus bv. 9 str. C68]
 gi|256369702|ref|YP_003107212.1| DNA repair protein RadC [Brucella microti CCM 4915]
 gi|260168972|ref|ZP_05755783.1| DNA repair protein RadC [Brucella sp. F5/99]
 gi|260546732|ref|ZP_05822471.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260565477|ref|ZP_05835961.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260566199|ref|ZP_05836669.1| DNA repair protein RadC [Brucella suis bv. 4 str. 40]
 gi|260755015|ref|ZP_05867363.1| DNA repair protein RadC [Brucella abortus bv. 6 str. 870]
 gi|260758231|ref|ZP_05870579.1| DNA repair protein RadC [Brucella abortus bv. 4 str. 292]
 gi|260762058|ref|ZP_05874401.1| DNA repair protein RadC [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884026|ref|ZP_05895640.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261214271|ref|ZP_05928552.1| DNA repair protein RadC [Brucella abortus bv. 3 str. Tulya]
 gi|261219056|ref|ZP_05933337.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261317907|ref|ZP_05957104.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261322116|ref|ZP_05961313.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261325359|ref|ZP_05964556.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261752583|ref|ZP_05996292.1| DNA repair protein RadC [Brucella suis bv. 5 str. 513]
 gi|261755242|ref|ZP_05998951.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|261758465|ref|ZP_06002174.1| DNA repair protein RadC [Brucella sp. F5/99]
 gi|265988936|ref|ZP_06101493.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265991349|ref|ZP_06103906.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265995186|ref|ZP_06107743.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|294852618|ref|ZP_06793291.1| DNA repair protein radC [Brucella sp. NVSL 07-0026]
 gi|297248579|ref|ZP_06932297.1| DNA repair protein radC [Brucella abortus bv. 5 str. B3196]
 gi|306840253|ref|ZP_07473027.1| DNA repair protein RadC [Brucella sp. BO2]
 gi|306844186|ref|ZP_07476779.1| DNA repair protein RadC [Brucella sp. BO1]
 gi|54039000|sp|P65956|Y1283_BRUSU RecName: Full=UPF0758 protein BR1283
 gi|54041782|sp|P65955|Y718_BRUME RecName: Full=UPF0758 protein BMEI0718
 gi|73913733|sp|Q57CL3|Y1284_BRUAB RecName: Full=UPF0758 protein BruAb1_1284
 gi|123547434|sp|Q2YRF9|Y1301_BRUA2 RecName: Full=UPF0758 protein BAB1_1301
 gi|238687216|sp|A9M5U5|Y1306_BRUC2 RecName: Full=UPF0758 protein BCAN_A1306
 gi|238689385|sp|B2S6C0|Y1214_BRUA1 RecName: Full=UPF0758 protein BAbS19_I12140
 gi|17982652|gb|AAL51899.1| DNA repair protein radc homolog [Brucella melitensis bv. 1 str.
           16M]
 gi|23348123|gb|AAN30201.1| DNA repair protein RadC [Brucella suis 1330]
 gi|62196321|gb|AAX74621.1| RadC, DNA repair protein RadC [Brucella abortus bv. 1 str. 9-941]
 gi|82616211|emb|CAJ11257.1| DNA repair protein RadC [Brucella melitensis biovar Abortus 2308]
 gi|161336045|gb|ABX62350.1| DNA repair protein RadC [Brucella canis ATCC 23365]
 gi|189019995|gb|ACD72717.1| DNA repair protein RadC [Brucella abortus S19]
 gi|225617754|gb|EEH14799.1| DNA repair protein RadC [Brucella ceti str. Cudo]
 gi|237788994|gb|EEP63205.1| DNA repair protein RadC [Brucella abortus str. 2308 A]
 gi|255999864|gb|ACU48263.1| DNA repair protein RadC [Brucella microti CCM 4915]
 gi|260095782|gb|EEW79659.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260151545|gb|EEW86639.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260155717|gb|EEW90797.1| DNA repair protein RadC [Brucella suis bv. 4 str. 40]
 gi|260668549|gb|EEX55489.1| DNA repair protein RadC [Brucella abortus bv. 4 str. 292]
 gi|260672490|gb|EEX59311.1| DNA repair protein RadC [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675123|gb|EEX61944.1| DNA repair protein RadC [Brucella abortus bv. 6 str. 870]
 gi|260873554|gb|EEX80623.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260915878|gb|EEX82739.1| DNA repair protein RadC [Brucella abortus bv. 3 str. Tulya]
 gi|260924145|gb|EEX90713.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261294806|gb|EEX98302.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261297130|gb|EEY00627.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261301339|gb|EEY04836.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261738449|gb|EEY26445.1| DNA repair protein RadC [Brucella sp. F5/99]
 gi|261742336|gb|EEY30262.1| DNA repair protein RadC [Brucella suis bv. 5 str. 513]
 gi|261744995|gb|EEY32921.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262766299|gb|EEZ12088.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263002133|gb|EEZ14708.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|264661133|gb|EEZ31394.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|294821207|gb|EFG38206.1| DNA repair protein radC [Brucella sp. NVSL 07-0026]
 gi|297175748|gb|EFH35095.1| DNA repair protein radC [Brucella abortus bv. 5 str. B3196]
 gi|306275461|gb|EFM57198.1| DNA repair protein RadC [Brucella sp. BO1]
 gi|306289780|gb|EFM60962.1| DNA repair protein RadC [Brucella sp. BO2]
          Length = 249

 Score =  136 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 63/97 (64%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     LNI VHDH+IIGK    S + LR+I
Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLRSLRLI 249


>gi|163843546|ref|YP_001627950.1| DNA repair protein RadC [Brucella suis ATCC 23445]
 gi|163674269|gb|ABY38380.1| DNA repair protein RadC [Brucella suis ATCC 23445]
          Length = 249

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 63/97 (64%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     LNI VHDH+IIGK    S + LR+I
Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLRSLRLI 249


>gi|283856582|ref|YP_003377816.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775591|gb|ADB28982.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 169

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI       GTID  PVY RE+V+  L L+A ++IL HNHPSGNP PS AD 
Sbjct: 73  LFLDTRHRLIEYREMFHGTIDSAPVYPREVVKEALRLNAAAVILSHNHPSGNPEPSQADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH+I+      SF    +I
Sbjct: 133 VLTQRLKKALGLVDMRVLDHVIVAGSTTESFAERGLI 169


>gi|254719330|ref|ZP_05181141.1| DNA repair protein RadC [Brucella sp. 83/13]
 gi|265984331|ref|ZP_06097066.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306839105|ref|ZP_07471922.1| DNA repair protein RadC [Brucella sp. NF 2653]
 gi|264662923|gb|EEZ33184.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306405652|gb|EFM61914.1| DNA repair protein RadC [Brucella sp. NF 2653]
          Length = 249

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 63/97 (64%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     LNI VHDH+IIGK    S + LR+I
Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLRSLRLI 249


>gi|238783986|ref|ZP_04628002.1| DNA repair protein radC [Yersinia bercovieri ATCC 43970]
 gi|238715094|gb|EEQ07090.1| DNA repair protein radC [Yersinia bercovieri ATCC 43970]
          Length = 249

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 153 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKANAAALILAHNHPSGRAEPSQADR 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MTQ +I   + L+I V DH+++G+   VSF     +
Sbjct: 213 LMTQQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 249


>gi|218692705|ref|YP_002400917.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|218430269|emb|CAR11137.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
          Length = 163

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 163


>gi|154253040|ref|YP_001413864.1| DNA repair protein RadC [Parvibaculum lavamentivorans DS-1]
 gi|154156990|gb|ABS64207.1| DNA repair protein RadC [Parvibaculum lavamentivorans DS-1]
          Length = 230

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 58/97 (59%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADEVQ +GT+DH PVY RE+V+R LEL+A+++ILVHNHPSG+P PS AD+
Sbjct: 134 LFLDRKNVLIADEVQQKGTVDHTPVYPREVVKRALELNASALILVHNHPSGDPTPSTADV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I+ T  PL I VHDH+++GK    SF+ L +I
Sbjct: 194 EMTRQIVNTAKPLGIEVHDHLVVGKGRHASFRTLGLI 230


>gi|170683005|ref|YP_001745192.1| RadC family DNA repair protein [Escherichia coli SMS-3-5]
 gi|170520723|gb|ACB18901.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5]
          Length = 158

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|271498728|ref|YP_003331753.1| DNA repair protein RadC [Dickeya dadantii Ech586]
 gi|270342283|gb|ACZ75048.1| DNA repair protein RadC [Dickeya dadantii Ech586]
          Length = 221

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  +    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 125 MFLDNQHRVICHQEMFAGTISRVEVHPREIVREALKVNAAALILAHNHPSGRAEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ I+     + I V DH++IG+  +VSF     +
Sbjct: 185 SITEKIVQACQLMEIRVLDHLVIGRGEYVSFAERGWL 221


>gi|188495664|ref|ZP_03002934.1| DNA repair protein, RadC family [Escherichia coli 53638]
 gi|193062199|ref|ZP_03043295.1| DNA repair protein, RadC family [Escherichia coli E22]
 gi|193062945|ref|ZP_03044038.1| DNA repair protein, RadC family [Escherichia coli E22]
 gi|256023420|ref|ZP_05437285.1| DNA repair protein [Escherichia sp. 4_1_40B]
 gi|260844612|ref|YP_003222390.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
 gi|260856468|ref|YP_003230359.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368]
 gi|260868651|ref|YP_003235053.1| putative DNA repair protein [Escherichia coli O111:H- str. 11128]
 gi|300824768|ref|ZP_07104873.1| putative DNA repair protein RadC [Escherichia coli MS 119-7]
 gi|312973758|ref|ZP_07787930.1| DNA repair RadC family protein [Escherichia coli 1827-70]
 gi|188490863|gb|EDU65966.1| DNA repair protein, RadC family [Escherichia coli 53638]
 gi|192931588|gb|EDV84189.1| DNA repair protein, RadC family [Escherichia coli E22]
 gi|192932419|gb|EDV85017.1| DNA repair protein, RadC family [Escherichia coli E22]
 gi|226237408|dbj|BAH46930.1| predicted DNA repair protein [Escherichia coli O55:H7]
 gi|257755117|dbj|BAI26619.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368]
 gi|257759759|dbj|BAI31256.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
 gi|257765007|dbj|BAI36502.1| putative DNA repair protein [Escherichia coli O111:H- str. 11128]
 gi|300522755|gb|EFK43824.1| putative DNA repair protein RadC [Escherichia coli MS 119-7]
 gi|310332353|gb|EFP99588.1| DNA repair RadC family protein [Escherichia coli 1827-70]
 gi|323156365|gb|EFZ42522.1| DNA repair RadC family protein [Escherichia coli EPECa14]
 gi|323177162|gb|EFZ62752.1| DNA repair protein RadC family protein [Escherichia coli 1180]
 gi|330911842|gb|EGH40352.1| putative DNA repair protein [Escherichia coli AA86]
 gi|332092379|gb|EGI97452.1| DNA repair protein RadC family protein [Shigella boydii 5216-82]
          Length = 158

 Score =  136 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|229520275|ref|ZP_04409701.1| DNA repair protein RadC [Vibrio cholerae TM 11079-80]
 gi|229342641|gb|EEO07633.1| DNA repair protein RadC [Vibrio cholerae TM 11079-80]
          Length = 158

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ ++I V DH+++GK + VSF     +
Sbjct: 123 RITQRLKDALSLVDIRVLDHVVVGKSS-VSFAERGWL 158


>gi|254850972|ref|ZP_05240322.1| DNA repair protein [Vibrio cholerae MO10]
 gi|21885298|gb|AAL59704.1| putative DNA repair radC [Vibrio cholerae]
 gi|254846677|gb|EET25091.1| DNA repair protein [Vibrio cholerae MO10]
 gi|259156323|gb|ACV96269.1| DNA repair protein RadC [Vibrio cholerae Ind4]
 gi|259156536|gb|ACV96480.1| DNA repair protein RadC [Vibrio cholerae Mex1]
          Length = 165

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GT+D   VY RE+ +R LEL+A ++ILVHNHPSG+P PS+AD 
Sbjct: 69  LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNAAAVILVHNHPSGDPEPSEADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L+ ++I   DH+++  +  VS      +
Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSLAERGYL 165


>gi|26249506|ref|NP_755546.1| putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|301017434|ref|ZP_07182164.1| putative DNA repair protein RadC [Escherichia coli MS 69-1]
 gi|26109914|gb|AAN82119.1|AE016766_207 Putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|291291731|gb|ADD91702.1| YeeS [Escherichia coli]
 gi|300400214|gb|EFJ83752.1| putative DNA repair protein RadC [Escherichia coli MS 69-1]
 gi|323960166|gb|EGB55809.1| DNA repair protein RadC [Escherichia coli H489]
 gi|332102586|gb|EGJ05932.1| YeeS protein [Shigella sp. D9]
          Length = 163

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 163


>gi|197286286|ref|YP_002152158.1| plasmid-related DNA repair protein [Proteus mirabilis HI4320]
 gi|194683773|emb|CAR44822.1| putative plasmid-related DNA repair protein [Proteus mirabilis
           HI4320]
          Length = 165

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GT+D   VY RE+ +R LE +A ++ILVHNHPSG+P PS+AD 
Sbjct: 69  LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALEFNAAAVILVHNHPSGDPEPSEADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L+ ++I   DH+++  +  VS      +
Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSLAERGYL 165


>gi|254470509|ref|ZP_05083913.1| DNA repair protein RadC [Pseudovibrio sp. JE062]
 gi|211960820|gb|EEA96016.1| DNA repair protein RadC [Pseudovibrio sp. JE062]
          Length = 275

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/97 (64%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+ +R LELSA +IILVHNHPSG+P PS  DI
Sbjct: 179 LFLDKKNRLIADEVQQTGTVDHTPVYPREVTKRALELSACAIILVHNHPSGDPTPSRQDI 238

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I +TL PL I++HDHIII     VSF+GL++I
Sbjct: 239 EMTTKIASTLEPLGIVLHDHIIIAGSGHVSFRGLQLI 275


>gi|57434429|emb|CAI43846.1| YeeS protein [Escherichia coli]
          Length = 163

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 163


>gi|315633557|ref|ZP_07888847.1| DNA repair protein RadC [Aggregatibacter segnis ATCC 33393]
 gi|315477599|gb|EFU68341.1| DNA repair protein RadC [Aggregatibacter segnis ATCC 33393]
          Length = 232

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY RE+++  L  +A +IIL HNHPSG   PS +D 
Sbjct: 136 LFLDNQHRLIKQERLFLGTINKAMVYPREVIKEALACNAAAIILAHNHPSGVAEPSFSDR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH +IGK  + SF    ++
Sbjct: 196 QITETIKQAAELVEIRVLDHFVIGKGNYFSFAEQNLL 232


>gi|284924227|emb|CBG37327.1| putative plasmid-related protein [Escherichia coli 042]
          Length = 163

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 163


>gi|304399017|ref|ZP_07380886.1| DNA repair protein RadC [Pantoea sp. aB]
 gi|304353477|gb|EFM17855.1| DNA repair protein RadC [Pantoea sp. aB]
          Length = 218

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  +    G+I+ V V+ REIV+  L+L+A ++IL HNHPSG   PS AD 
Sbjct: 122 LFLDNQHRVLRAQNMFSGSINSVEVHPREIVREALKLNAAALILAHNHPSGMAEPSRADR 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +       +I + DH++IG   +VSF     +
Sbjct: 182 EVTHKVSEACQLFDIRLLDHLVIGHGEYVSFAERGWL 218


>gi|307556532|gb|ADN49307.1| DNA repair protein [Escherichia coli ABU 83972]
          Length = 158

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|323971802|gb|EGB67027.1| DNA repair protein RadC [Escherichia coli TA007]
          Length = 158

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|293416392|ref|ZP_06659031.1| radC-like protein yeeS [Escherichia coli B185]
 gi|291431748|gb|EFF04731.1| radC-like protein yeeS [Escherichia coli B185]
          Length = 158

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|300818066|ref|ZP_07098279.1| putative DNA repair protein RadC [Escherichia coli MS 107-1]
 gi|301330444|ref|ZP_07223068.1| putative DNA repair protein RadC [Escherichia coli MS 78-1]
 gi|47155002|emb|CAE85201.1| YeeS protein [Escherichia coli]
 gi|300529476|gb|EFK50538.1| putative DNA repair protein RadC [Escherichia coli MS 107-1]
 gi|300843599|gb|EFK71359.1| putative DNA repair protein RadC [Escherichia coli MS 78-1]
          Length = 163

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 163


>gi|15808746|gb|AAL08475.1| unknown [Shigella flexneri 2a]
 gi|281600433|gb|ADA73417.1| putative DNA repair protein [Shigella flexneri 2002017]
          Length = 163

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 163


>gi|238898968|ref|YP_002924650.1| associated with replication fork, possible DNA repair protein
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229466728|gb|ACQ68502.1| associated with replication fork, possible DNA repair protein
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 222

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/97 (46%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I+ E    GTID V V+ RE++++ L ++A +IIL HNHPSG P PS AD 
Sbjct: 126 LFLNNKNRVISYEELFSGTIDTVEVHPREVLRKALTVNAAAIILAHNHPSGEPEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  II     L+I V DHI+IG    VSF     I
Sbjct: 186 LITTQIIEASALLDIRVLDHIVIGHGKCVSFAERGWI 222


>gi|237730257|ref|ZP_04560738.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226905796|gb|EEH91714.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 158

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LIA E    GTI+   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 62  LYLDNQNQLIAHETLFSGTINRTEVYPREVVKRALYFNAAAVILAHNHPSGETTPSQADK 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  ++I V DH+I+G     SF    ++
Sbjct: 122 ALTQRLTQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158


>gi|251793907|ref|YP_003008639.1| DNA repair protein RadC [Aggregatibacter aphrophilus NJ8700]
 gi|247535306|gb|ACS98552.1| DNA repair protein RadC [Aggregatibacter aphrophilus NJ8700]
          Length = 219

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 123 LFLDTQHRLIKQENLFLGTINQAMVYPREIIKEALACNAAALILAHNHPSGVAEPSFSDR 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+TQ I      + I V DH +IG+  + SF    ++
Sbjct: 183 NITQKIKQAAELMEIRVLDHFVIGRGCYFSFAEQNLL 219


>gi|171769881|sp|A7MQ95|Y4094_ENTS8 RecName: Full=UPF0758 protein ESA_04094
          Length = 230

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I       GT+ HV V+ REIV+  + L+A  IIL HNHPSG   PS AD 
Sbjct: 134 IFLDSQNRIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+ +   ++I V DH++IG+  +VSF     I
Sbjct: 194 MVTERIVKSCQLVDIRVLDHLVIGRGEYVSFAERGWI 230


>gi|15832057|ref|NP_310830.1| DNA repair protein [Escherichia coli O157:H7 str. Sakai]
 gi|168751564|ref|ZP_02776586.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4113]
 gi|168758439|ref|ZP_02783446.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4401]
 gi|168764086|ref|ZP_02789093.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4501]
 gi|168770321|ref|ZP_02795328.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4486]
 gi|168777112|ref|ZP_02802119.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4196]
 gi|168783999|ref|ZP_02809006.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4076]
 gi|168790206|ref|ZP_02815213.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC869]
 gi|168801968|ref|ZP_02826975.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC508]
 gi|193062959|ref|ZP_03044051.1| DNA repair protein, RadC family [Escherichia coli E22]
 gi|195939516|ref|ZP_03084898.1| putative DNA repair protein [Escherichia coli O157:H7 str. EC4024]
 gi|208810673|ref|ZP_03252549.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4206]
 gi|208816945|ref|ZP_03258065.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4045]
 gi|208819226|ref|ZP_03259546.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4042]
 gi|209397679|ref|YP_002271174.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4115]
 gi|217329638|ref|ZP_03445717.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           TW14588]
 gi|254793710|ref|YP_003078547.1| DNA repair protein [Escherichia coli O157:H7 str. TW14359]
 gi|291283239|ref|YP_003500057.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str.
           CB9615]
 gi|291284324|ref|YP_003501142.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str.
           CB9615]
 gi|13362271|dbj|BAB36226.1| putative DNA repair protein [Escherichia coli O157:H7 str. Sakai]
 gi|187767605|gb|EDU31449.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4196]
 gi|188014397|gb|EDU52519.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4113]
 gi|188998741|gb|EDU67727.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4076]
 gi|189354753|gb|EDU73172.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4401]
 gi|189360779|gb|EDU79198.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4486]
 gi|189365845|gb|EDU84261.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4501]
 gi|189370302|gb|EDU88718.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC869]
 gi|189375952|gb|EDU94368.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC508]
 gi|192931218|gb|EDV83820.1| DNA repair protein, RadC family [Escherichia coli E22]
 gi|208725189|gb|EDZ74896.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4206]
 gi|208731288|gb|EDZ79977.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4045]
 gi|208739349|gb|EDZ87031.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4042]
 gi|209159079|gb|ACI36512.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4115]
 gi|217317406|gb|EEC25835.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           TW14588]
 gi|254593110|gb|ACT72471.1| DNA repair protein [Escherichia coli O157:H7 str. TW14359]
 gi|290763112|gb|ADD57073.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str.
           CB9615]
 gi|290764197|gb|ADD58158.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str.
           CB9615]
 gi|320188176|gb|EFW62840.1| putative DNA repair protein [Escherichia coli O157:H7 str. EC1212]
 gi|326338356|gb|EGD62184.1| putative DNA repair protein [Escherichia coli O157:H7 str. 1044]
 gi|326347123|gb|EGD70856.1| putative DNA repair protein [Escherichia coli O157:H7 str. 1125]
          Length = 158

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|17547339|ref|NP_520741.1| hypothetical protein RSc2620 [Ralstonia solanacearum GMI1000]
 gi|17429642|emb|CAD16327.1| probable dna repair radc-like protein [Ralstonia solanacearum
           GMI1000]
          Length = 169

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D  + LI      RGTID   VY RE+V+  L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 73  LFMDTQHRLIEYAEMFRGTIDGASVYPRELVKEALRLNAAAVIVSHNHPSGNPEPSGADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH+I+      SF    +I
Sbjct: 133 ALTQRLKEALGLVDVRVLDHVIVAGTDTTSFAERGLI 169


>gi|21228893|ref|NP_634815.1| DNA repair protein RadC [Methanosarcina mazei Go1]
 gi|25009023|sp|Q8PTC5|Y2791_METMA RecName: Full=UPF0758 protein MM_2791
 gi|20907423|gb|AAM32487.1| DNA repair protein [Methanosarcina mazei Go1]
          Length = 229

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N ++ +EV S G+++   V+ RE+ +  L  S+ S+I+VHNHPSG+P+PS  DI
Sbjct: 132 LYLDTKNQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMVHNHPSGDPSPSREDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L I + DHIIIG   +VS K    +
Sbjct: 192 MVTEKLVEGGKLLGIDILDHIIIGDGRYVSLKDEGFV 228


>gi|284922959|emb|CBG36051.1| putative DNA repair protein [Escherichia coli 042]
 gi|284924496|emb|CBG37630.1| putative RadC-like DNA repair protein [Escherichia coli 042]
 gi|323939702|gb|EGB35906.1| DNA repair protein RadC [Escherichia coli E482]
 gi|323961766|gb|EGB57367.1| DNA repair protein RadC [Escherichia coli H489]
          Length = 163

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163


>gi|309703383|emb|CBJ02722.1| putative RadC DNA repair protein [Escherichia coli ETEC H10407]
          Length = 158

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|218702486|ref|YP_002410115.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           IAI39]
 gi|218372472|emb|CAR20348.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           IAI39]
          Length = 163

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+IIG     SF    ++
Sbjct: 127 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 163


>gi|323960883|gb|EGB56503.1| DNA repair protein RadC [Escherichia coli H489]
          Length = 163

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 163


>gi|238754770|ref|ZP_04616122.1| DNA repair protein radC [Yersinia ruckeri ATCC 29473]
 gi|238707078|gb|EEP99443.1| DNA repair protein radC [Yersinia ruckeri ATCC 29473]
          Length = 222

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 126 MFLDNQHRVIRHEEMFTGTITSVEVHPREIVREALKINAVALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++   + L+I V DH+++G+   VSF     I
Sbjct: 186 LITAQVVKACSLLDIRVLDHLVVGRGECVSFAERGWI 222


>gi|315256374|gb|EFU36342.1| putative DNA repair protein RadC [Escherichia coli MS 85-1]
          Length = 158

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|300903084|ref|ZP_07121021.1| putative DNA repair protein RadC [Escherichia coli MS 84-1]
 gi|300404861|gb|EFJ88399.1| putative DNA repair protein RadC [Escherichia coli MS 84-1]
          Length = 163

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 163


>gi|153802336|ref|ZP_01956922.1| DNA repair protein [Vibrio cholerae MZO-3]
 gi|124122109|gb|EAY40852.1| DNA repair protein [Vibrio cholerae MZO-3]
 gi|172051601|emb|CAQ34996.1| hypothetical protein [Photobacterium damselae subsp. piscicida]
 gi|259156591|gb|ACV96534.1| DNA repair protein RadC [Vibrio fluvialis Ind1]
          Length = 165

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GT+D   VY RE+ +R LEL+A ++ILVHNHPSG+P PS+AD 
Sbjct: 69  LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNAAAVILVHNHPSGDPEPSEADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L+ ++I   DH+++  +  VS      +
Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSLAERGYL 165


>gi|323175748|gb|EFZ61342.1| DNA repair protein RadC family protein [Escherichia coli 1180]
          Length = 158

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|152979886|ref|YP_001354241.1| DNA repair protein RadC [Janthinobacterium sp. Marseille]
 gi|166218783|sp|A6T144|Y2551_JANMA RecName: Full=UPF0758 protein mma_2551
 gi|151279963|gb|ABR88373.1| DNA repair protein [Janthinobacterium sp. Marseille]
          Length = 224

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGT+ H  VY REIV+  L  +A S+IL HNHPSG+  PS AD 
Sbjct: 128 LFLDVKNRLIACEELFRGTLTHTSVYPREIVKEALTHNAASVILAHNHPSGSSEPSAADH 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +   L  +++ V DH ++G     SF     +
Sbjct: 188 SLTQALKQALALIDVRVLDHFVVGGKNVYSFAEHGHL 224


>gi|194449680|ref|YP_002048317.1| DNA repair protein, RadC family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194407984|gb|ACF68203.1| DNA repair protein, RadC family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
          Length = 158

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|157154969|ref|YP_001464407.1| RadC family DNA repair protein [Escherichia coli E24377A]
 gi|157076999|gb|ABV16707.1| DNA repair protein, RadC family [Escherichia coli E24377A]
          Length = 158

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|57545665|gb|AAW51756.1| Aec73 [Escherichia coli]
          Length = 163

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+IIG     SF    ++
Sbjct: 127 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 163


>gi|331650180|ref|ZP_08351253.1| DNA repair protein RadC [Escherichia coli M605]
 gi|331041125|gb|EGI13282.1| DNA repair protein RadC [Escherichia coli M605]
          Length = 163

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+IIG     SF    ++
Sbjct: 127 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 163


>gi|251791518|ref|YP_003006239.1| DNA repair protein RadC [Dickeya zeae Ech1591]
 gi|247540139|gb|ACT08760.1| DNA repair protein RadC [Dickeya zeae Ech1591]
          Length = 221

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  +    GTI  V V+ REIV+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 125 MFLDNQHRVIRHQEMFAGTISSVEVHPREIVREALRANAAALILAHNHPSGRAEPSKADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I+     L+I V DH++IG+  +VSF     I
Sbjct: 185 SITGKIVQACQLLDIRVLDHLVIGRGEYVSFAERGWI 221


>gi|301304122|ref|ZP_07210238.1| putative DNA repair protein RadC [Escherichia coli MS 124-1]
 gi|300840535|gb|EFK68295.1| putative DNA repair protein RadC [Escherichia coli MS 124-1]
 gi|315252292|gb|EFU32260.1| putative DNA repair protein RadC [Escherichia coli MS 85-1]
          Length = 163

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 163


>gi|300825335|ref|ZP_07105415.1| putative DNA repair protein RadC [Escherichia coli MS 119-7]
 gi|300522198|gb|EFK43267.1| putative DNA repair protein RadC [Escherichia coli MS 119-7]
          Length = 158

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+V+R L  +A +++L HNHPSG   P  AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVVKRALYHNAAAVVLAHNHPSGEVTPGKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSRVFSFAEHGLL 158


>gi|110643998|ref|YP_671728.1| putative radC-like protein [Escherichia coli 536]
 gi|170682543|ref|YP_001744295.1| RadC family DNA repair protein [Escherichia coli SMS-3-5]
 gi|256019130|ref|ZP_05432995.1| putative radC-like protein [Shigella sp. D9]
 gi|306816730|ref|ZP_07450859.1| putative radC-like protein [Escherichia coli NC101]
 gi|309797259|ref|ZP_07691654.1| putative DNA repair protein RadC [Escherichia coli MS 145-7]
 gi|24528057|emb|CAD33787.1| Z1217 protein [Escherichia coli]
 gi|110345590|gb|ABG71827.1| putative radC-like protein [Escherichia coli 536]
 gi|170520261|gb|ACB18439.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5]
 gi|305849947|gb|EFM50407.1| putative radC-like protein [Escherichia coli NC101]
 gi|307555022|gb|ADN47797.1| DNA repair protein [Escherichia coli ABU 83972]
 gi|308119134|gb|EFO56396.1| putative DNA repair protein RadC [Escherichia coli MS 145-7]
          Length = 158

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|195183362|dbj|BAG66899.1| predicted protein [Escherichia coli O111:H-]
          Length = 163

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYYNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163


>gi|110833075|ref|YP_691934.1| DNA repair protein RadC-like protein [Alcanivorax borkumensis SK2]
 gi|123050781|sp|Q0VT58|Y214_ALCBS RecName: Full=UPF0758 protein ABO_0214
 gi|110646186|emb|CAL15662.1| DNA repair protein RadC homolog [Alcanivorax borkumensis SK2]
          Length = 224

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/95 (42%), Positives = 58/95 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GTID   VY RE+V+R +E +A ++IL HNHPSG   PS +D 
Sbjct: 128 LFLDNKHRLIAFEKLFQGTIDAAAVYPREVVRRAMEHNAAAVILAHNHPSGVAEPSQSDH 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ ++  L  + + V DH++IG   +VS     
Sbjct: 188 AITRRLVEALGLVEVRVLDHLVIGDGGWVSLASRG 222


>gi|18265919|gb|AAL67392.1|AF447814_60 putative intergenic-region protein [Escherichia coli]
          Length = 260

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 164 LYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 223

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 224 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 260


>gi|16128232|ref|NP_414781.1| CP4-6 prophage; predicted DNA repair protein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89107120|ref|AP_000900.1| predicted DNA repair protein [Escherichia coli str. K-12 substr.
           W3110]
 gi|170079872|ref|YP_001729192.1| CP4-6 prophage; DNA repair protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|238899635|ref|YP_002925431.1| CP4-6 prophage; putative DNA repair protein [Escherichia coli
           BW2952]
 gi|3025218|sp|Q47685|YKFG_ECOLI RecName: Full=UPF0758 protein ykfG
 gi|1552815|gb|AAB08667.1| similar to E. coli ORF_o160, also similar to radC [Escherichia
           coli]
 gi|2367100|gb|AAC73350.1| CP4-6 prophage; predicted DNA repair protein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|4902982|dbj|BAA77916.1| predicted DNA repair protein [Escherichia coli str. K12 substr.
           W3110]
 gi|169887707|gb|ACB01414.1| CP4-6 prophage; predicted DNA repair protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|238860643|gb|ACR62641.1| CP4-6 prophage; predicted DNA repair protein [Escherichia coli
           BW2952]
 gi|260450557|gb|ACX40979.1| DNA repair protein RadC [Escherichia coli DH1]
 gi|315134932|dbj|BAJ42091.1| CP4-6 prophage; putative DNA repair protein [Escherichia coli DH1]
          Length = 158

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LIA E    GTI+   V+ RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 62  LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158


>gi|254361402|ref|ZP_04977543.1| DNA repair protein RadC [Mannheimia haemolytica PHL213]
 gi|153092908|gb|EDN73939.1| DNA repair protein RadC [Mannheimia haemolytica PHL213]
          Length = 241

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 62/96 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  E    GTI+   V+ REI++R L+ +A +II+ HNHPSG+  PS++D 
Sbjct: 132 LFLDNQNRLIYKEKMFFGTINQTAVHPREIIKRALKYNAAAIIVAHNHPSGSCLPSESDR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ I      ++I   DHII+GK+ + SF+  ++
Sbjct: 192 SLTKKIEMACELVDIRFVDHIIVGKEKYFSFEEEKL 227


>gi|331647648|ref|ZP_08348740.1| putative DNA repair protein [Escherichia coli M605]
 gi|331043372|gb|EGI15510.1| putative DNA repair protein [Escherichia coli M605]
          Length = 163

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQAFSFAEHGLL 163


>gi|331679016|ref|ZP_08379688.1| putative DNA repair protein [Escherichia coli H591]
 gi|331073081|gb|EGI44404.1| putative DNA repair protein [Escherichia coli H591]
          Length = 158

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|53729025|ref|ZP_00134298.2| COG2003: DNA repair proteins [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126209424|ref|YP_001054649.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae L20]
 gi|165977413|ref|YP_001653006.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|190151327|ref|YP_001969852.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|303250352|ref|ZP_07336551.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303251745|ref|ZP_07337916.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307246909|ref|ZP_07528974.1| hypothetical protein appser1_20990 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307249045|ref|ZP_07531053.1| hypothetical protein appser2_20080 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307251244|ref|ZP_07533165.1| hypothetical protein appser4_20050 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307253661|ref|ZP_07535528.1| hypothetical protein appser6_21530 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307255891|ref|ZP_07537692.1| hypothetical protein appser9_21120 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307260344|ref|ZP_07542051.1| hypothetical protein appser11_21250 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307262474|ref|ZP_07544119.1| hypothetical protein appser12_20140 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|307264682|ref|ZP_07546262.1| hypothetical protein appser13_20670 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|166218771|sp|A3N3Q8|Y1970_ACTP2 RecName: Full=UPF0758 protein APL_1970
 gi|238687531|sp|B0BTZ5|Y2017_ACTPJ RecName: Full=UPF0758 protein APJL_2017
 gi|238692412|sp|B3H340|Y2058_ACTP7 RecName: Full=UPF0758 protein APP7_2058
 gi|126098216|gb|ABN75044.1| DNA repair protein RadC-like protein [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165877514|gb|ABY70562.1| DNA repair protein [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|189916458|gb|ACE62710.1| DNA repair protein RadC-like protein [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649175|gb|EFL79360.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302650822|gb|EFL80979.1| DNA repair protein RadC [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306852194|gb|EFM84434.1| hypothetical protein appser1_20990 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306854503|gb|EFM86698.1| hypothetical protein appser2_20080 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306856760|gb|EFM88895.1| hypothetical protein appser4_20050 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858897|gb|EFM90943.1| hypothetical protein appser6_21530 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306861159|gb|EFM93152.1| hypothetical protein appser9_21120 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306865595|gb|EFM97476.1| hypothetical protein appser11_21250 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306867851|gb|EFM99682.1| hypothetical protein appser12_20140 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306869994|gb|EFN01758.1| hypothetical protein appser13_20670 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 220

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/94 (40%), Positives = 57/94 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI  E    GTI+   VY REI++  L+ +A +II+ HNHPSGN  PS++D 
Sbjct: 124 MFLDNQNRLIKKEKMFYGTINQATVYPREIIKEALKCNAAAIIVAHNHPSGNCTPSESDR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ +    + + I   DHI++GK  + SF+  
Sbjct: 184 ALTKKLEMACDLVGIRFVDHIVVGKGDYFSFEEE 217


>gi|15800738|ref|NP_286752.1| RadC family DNA repair protein [Escherichia coli O157:H7 EDL933]
 gi|15830657|ref|NP_309430.1| DNA repair protein [Escherichia coli O157:H7 str. Sakai]
 gi|168747209|ref|ZP_02772231.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4113]
 gi|168754500|ref|ZP_02779507.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4401]
 gi|168760639|ref|ZP_02785646.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4501]
 gi|168767678|ref|ZP_02792685.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4486]
 gi|168773864|ref|ZP_02798871.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4196]
 gi|168781194|ref|ZP_02806201.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4076]
 gi|168789211|ref|ZP_02814218.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC869]
 gi|168789954|ref|ZP_02814961.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC869]
 gi|168799298|ref|ZP_02824305.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC508]
 gi|195935412|ref|ZP_03080794.1| putative DNA repair protein [Escherichia coli O157:H7 str. EC4024]
 gi|208806612|ref|ZP_03248949.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4206]
 gi|208815111|ref|ZP_03256290.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4045]
 gi|208822765|ref|ZP_03263084.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4042]
 gi|209398241|ref|YP_002269871.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4115]
 gi|215486235|ref|YP_002328666.1| hypothetical protein E2348C_1116 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217328314|ref|ZP_03444396.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           TW14588]
 gi|254792408|ref|YP_003077245.1| putative DNA repair protein, RADC family [Escherichia coli O157:H7
           str. TW14359]
 gi|260854510|ref|YP_003228401.1| hypothetical protein ECO26_1359 [Escherichia coli O26:H11 str.
           11368]
 gi|260867389|ref|YP_003233791.1| hypothetical protein ECO111_1303 [Escherichia coli O111:H- str.
           11128]
 gi|12514034|gb|AAG55362.1|AE005277_3 putative DNA repair protein, RADC family [Escherichia coli O157:H7
           str. EDL933]
 gi|13360863|dbj|BAB34826.1| putative DNA repair protein [Escherichia coli O157:H7 str. Sakai]
 gi|187770349|gb|EDU34193.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4196]
 gi|188018129|gb|EDU56251.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4113]
 gi|189001340|gb|EDU70326.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358273|gb|EDU76692.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4401]
 gi|189363292|gb|EDU81711.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4486]
 gi|189368665|gb|EDU87081.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4501]
 gi|189370470|gb|EDU88886.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC869]
 gi|189371180|gb|EDU89596.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC869]
 gi|189378248|gb|EDU96664.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC508]
 gi|208726413|gb|EDZ76014.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4206]
 gi|208731759|gb|EDZ80447.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4045]
 gi|208738250|gb|EDZ85933.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4042]
 gi|209159641|gb|ACI37074.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           EC4115]
 gi|215264307|emb|CAS08664.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|217318741|gb|EEC27167.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           TW14588]
 gi|254591808|gb|ACT71169.1| putative DNA repair protein, RADC family [Escherichia coli O157:H7
           str. TW14359]
 gi|257753159|dbj|BAI24661.1| hypothetical protein ECO26_1359 [Escherichia coli O26:H11 str.
           11368]
 gi|257763745|dbj|BAI35240.1| hypothetical protein ECO111_1303 [Escherichia coli O111:H- str.
           11128]
 gi|320189702|gb|EFW64358.1| Putative radC-like protein yeeS [Escherichia coli O157:H7 str.
           EC1212]
 gi|323156828|gb|EFZ42962.1| DNA repair RadC family protein [Escherichia coli EPECa14]
 gi|326339244|gb|EGD63058.1| Putative radC-like protein yeeS [Escherichia coli O157:H7 str.
           1125]
 gi|326344796|gb|EGD68544.1| Putative radC-like protein yeeS [Escherichia coli O157:H7 str.
           1044]
          Length = 158

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|320184366|gb|EFW59178.1| putative DNA repair protein [Shigella flexneri CDC 796-83]
          Length = 158

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|261248877|emb|CBG26731.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
          Length = 221

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD 
Sbjct: 125 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     ++I V DH+IIG+  +VSF     I
Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221


>gi|204928480|ref|ZP_03219679.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204321913|gb|EDZ07111.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 221

 Score =  135 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD 
Sbjct: 125 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     ++I V DH+IIG+  +VSF     I
Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221


>gi|307133081|ref|YP_003885097.1| protein associated with replication fork, putative DNA repair
           protein [Dickeya dadantii 3937]
 gi|306530610|gb|ADN00541.1| protein associated with replication fork, possible DNA repair
           protein [Dickeya dadantii 3937]
          Length = 232

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  +    GTI  V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 136 MFLDNQHRVIRHQEMFAGTISSVEVHPREIVREALKANAAALILAHNHPSGRAEPSQADR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I      L+I V DH++IG+  +VSF     I
Sbjct: 196 SITGKIAQACQLLDIRVLDHLVIGRGEYVSFAERGWI 232


>gi|57434486|emb|CAI43901.1| YeeS protein [Escherichia coli]
          Length = 163

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 163


>gi|300816625|ref|ZP_07096846.1| putative DNA repair protein RadC [Escherichia coli MS 107-1]
 gi|300530855|gb|EFK51917.1| putative DNA repair protein RadC [Escherichia coli MS 107-1]
          Length = 158

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|194432463|ref|ZP_03064750.1| DNA repair protein, RadC family [Shigella dysenteriae 1012]
 gi|194419350|gb|EDX35432.1| DNA repair protein, RadC family [Shigella dysenteriae 1012]
          Length = 158

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|149181794|ref|ZP_01860285.1| DNA repair protein RadC [Bacillus sp. SG-1]
 gi|148850535|gb|EDL64694.1| DNA repair protein RadC [Bacillus sp. SG-1]
          Length = 229

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +    G+++   V+ RE+ +     SA SII +HNHPSG+P PS  DI
Sbjct: 133 LYLNTKNQVLHKQTIFIGSLNASIVHPREVFKEAFRRSAASIICIHNHPSGDPTPSREDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DH+IIG+  +VS K    +
Sbjct: 193 EVTKRLVECGKIIGIEVLDHLIIGEKKYVSLKEKGYL 229


>gi|260845668|ref|YP_003223446.1| putative radC-like protein YeeS [Escherichia coli O103:H2 str.
           12009]
 gi|257760815|dbj|BAI32312.1| putative radC-like protein YeeS [Escherichia coli O103:H2 str.
           12009]
          Length = 158

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGRQVFSFAEHGLL 158


>gi|110643167|ref|YP_670897.1| putative radC-like protein YeeS [Escherichia coli 536]
 gi|191171912|ref|ZP_03033458.1| DNA repair protein, RadC family [Escherichia coli F11]
 gi|194436803|ref|ZP_03068903.1| DNA repair protein, RadC family [Escherichia coli 101-1]
 gi|260855983|ref|YP_003229874.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368]
 gi|110344759|gb|ABG70996.1| putative radC-like protein YeeS [Escherichia coli 536]
 gi|190907947|gb|EDV67540.1| DNA repair protein, RadC family [Escherichia coli F11]
 gi|194424285|gb|EDX40272.1| DNA repair protein, RadC family [Escherichia coli 101-1]
 gi|257754632|dbj|BAI26134.1| predicted DNA repair protein [Escherichia coli O26:H11 str. 11368]
          Length = 158

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|260846935|ref|YP_003224713.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
 gi|257762082|dbj|BAI33579.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
          Length = 158

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGRQVFSFAEHGLL 158


>gi|170765890|ref|ZP_02900701.1| DNA repair protein, RadC family [Escherichia albertii TW07627]
 gi|260858467|ref|YP_003232358.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368]
 gi|331668235|ref|ZP_08369085.1| putative DNA repair protein [Escherichia coli TA271]
 gi|170125036|gb|EDS93967.1| DNA repair protein, RadC family [Escherichia albertii TW07627]
 gi|257757116|dbj|BAI28618.1| putative DNA repair protein [Escherichia coli O26:H11 str. 11368]
 gi|309702306|emb|CBJ01626.1| putative RadC-like DNA repair protein [Escherichia coli ETEC
           H10407]
 gi|323172584|gb|EFZ58218.1| DNA repair protein RadC family protein [Escherichia coli LT-68]
 gi|331064536|gb|EGI36445.1| putative DNA repair protein [Escherichia coli TA271]
          Length = 158

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|293393619|ref|ZP_06637929.1| DNA repair protein RadC [Serratia odorifera DSM 4582]
 gi|291423954|gb|EFE97173.1| DNA repair protein RadC [Serratia odorifera DSM 4582]
          Length = 228

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI  V V+ REIV+  L+ +A +IIL HNHPSG   PS AD 
Sbjct: 132 LFLDNQHRVIRHQEMFTGTISSVVVHPREIVREALKANAAAIILAHNHPSGKAEPSHADR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I V DH++IG+   VSF     +
Sbjct: 192 LITEQVANACQLLEIRVLDHLVIGRGECVSFAERGWL 228


>gi|170680679|ref|YP_001746718.1| RadC family DNA repair protein [Escherichia coli SMS-3-5]
 gi|170518397|gb|ACB16575.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5]
          Length = 158

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|20095187|gb|AAM08053.1| hypothetical protein [Providencia rettgeri]
          Length = 165

 Score =  135 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GT+D   VY RE+ +R LEL+A ++ILVHNHPSG+P PS+AD 
Sbjct: 69  LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNAAAVILVHNHPSGDPEPSEADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L+ ++I   DH+++  +  VS      +
Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVAYEGCVSLAERGYL 165


>gi|323971984|gb|EGB67205.1| DNA repair protein RadC [Escherichia coli TA007]
          Length = 158

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+V+R L  +A +++L HNHPSG   P  AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVVKRALYHNAAAVVLAHNHPSGEVTPGKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+IIG     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIIGGSRVFSFAEHGLL 158


>gi|153822298|ref|ZP_01974965.1| DNA repair protein [Vibrio cholerae B33]
 gi|229509083|ref|ZP_04398570.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229608755|ref|YP_002879403.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|255743769|ref|ZP_05417727.1| DNA repair protein RadC [Vibrio cholera CIRS 101]
 gi|126520194|gb|EAZ77417.1| DNA repair protein [Vibrio cholerae B33]
 gi|229353840|gb|EEO18775.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229371410|gb|ACQ61833.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|255738630|gb|EET94017.1| DNA repair protein RadC [Vibrio cholera CIRS 101]
 gi|259156144|gb|ACV96092.1| DNA repair protein RadC [Providencia alcalifaciens Ban1]
 gi|259156276|gb|ACV96223.1| DNA repair protein RadC [Vibrio cholerae Ban5]
 gi|259156401|gb|ACV96346.1| DNA repair protein RadC [Vibrio cholerae Ind5]
          Length = 165

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GT+D   VY RE+ +R LEL+A ++ILVHNHPSG+P PS+AD 
Sbjct: 69  LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNAAAVILVHNHPSGDPEPSEADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L+ ++I   DH+++  +  VS      +
Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSLAERGYL 165


>gi|296533048|ref|ZP_06895694.1| DNA repair protein RadC [Roseomonas cervicalis ATCC 49957]
 gi|296266634|gb|EFH12613.1| DNA repair protein RadC [Roseomonas cervicalis ATCC 49957]
          Length = 252

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 70/97 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIADE Q+RGT++H PVY RE+V+RCLEL AT++ILVHNHPSG+P PS ADI
Sbjct: 156 LFLDSRNRLIADEAQARGTVNHTPVYPREVVKRCLELQATALILVHNHPSGDPTPSAADI 215

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      L I +HDH+I+G    +SF+   ++
Sbjct: 216 EMTAEIRAAAATLGIALHDHLIVGNGRHLSFRATGLL 252


>gi|218692535|ref|YP_002400747.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|283788471|ref|YP_003368336.1| putative DNA repair protein [Citrobacter rodentium ICC168]
 gi|218430099|emb|CAR11092.2| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|282951925|emb|CBG91646.1| putative DNA repair protein [Citrobacter rodentium ICC168]
          Length = 163

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163


>gi|254038104|ref|ZP_04872162.1| YeeS protein [Escherichia sp. 1_1_43]
 gi|226839728|gb|EEH71749.1| YeeS protein [Escherichia sp. 1_1_43]
          Length = 163

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD+
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADL 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163


>gi|307258076|ref|ZP_07539828.1| hypothetical protein appser10_20560 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306863439|gb|EFM95370.1| hypothetical protein appser10_20560 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 223

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/94 (40%), Positives = 57/94 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI  E    GTI+   VY REI++  L+ +A +II+ HNHPSGN  PS++D 
Sbjct: 124 MFLDNQNRLIKKEKMFYGTINQATVYPREIIKEALKCNAAAIIVAHNHPSGNCTPSESDR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ +    + + I   DHI++GK  + SF+  
Sbjct: 184 ALTKKLEMACDLVGIRFVDHIVVGKGDYFSFEEE 217


>gi|295095223|emb|CBK84313.1| DNA replication and repair protein RadC [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 221

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++++A  +IL HNHPSG   PS AD 
Sbjct: 125 IFLDNKNRVLKHTRLFSGTLSHVEVHPREIVREAIKVNAAGVILAHNHPSGCAEPSRADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II     ++I V DH+IIG+  ++SF     I
Sbjct: 185 AITERIIKCCQFMDIRVLDHLIIGRGEYISFAERGWI 221


>gi|227115112|ref|ZP_03828768.1| DNA repair protein RadC [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 221

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI+ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 125 LFLDNQHHVIRHQEMFVGTINSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+     + I V DH++IG   +VSF     I
Sbjct: 185 AITEQIVKACLLMEIRVLDHLVIGHGEYVSFAERGWI 221


>gi|194426516|ref|ZP_03059070.1| DNA repair protein, RadC family [Escherichia coli B171]
 gi|194415255|gb|EDX31523.1| DNA repair protein, RadC family [Escherichia coli B171]
 gi|323158205|gb|EFZ44297.1| DNA repair protein RadC family protein [Escherichia coli E128010]
          Length = 158

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYYNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|37680435|ref|NP_935044.1| DNA repair protein [Vibrio vulnificus YJ016]
 gi|37199183|dbj|BAC95015.1| DNA repair protein [Vibrio vulnificus YJ016]
          Length = 184

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI  +   RGT+D   VY RE+V+  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 89  LLLDNQHRLIEFKELFRGTVDAANVYPREVVKEALHVNAAAVIFAHNHPSGDPEPSQADK 148

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L+ ++I V DH+++G ++ VSF     I
Sbjct: 149 RITERLKDALSLVDIRVLDHVVVG-ESCVSFAERGWI 184


>gi|315614820|gb|EFU95458.1| DNA repair RadC family protein [Escherichia coli 3431]
          Length = 158

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|194469241|ref|ZP_03075225.1| DNA repair protein, RadC family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205358755|ref|ZP_02658774.2| DNA repair protein, RadC family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194455605|gb|EDX44444.1| DNA repair protein, RadC family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205332230|gb|EDZ18994.1| DNA repair protein, RadC family [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 160

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LIA E    G+I    V+ RE+V+R L  +A ++IL HNHPSG+ +PS AD 
Sbjct: 64  LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTSPSQADK 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++  L  ++I V DH+I+G    +SF    ++
Sbjct: 124 TITQRLVQALQLVDIRVPDHLIVGGTQILSFAEHGLL 160


>gi|218515385|ref|ZP_03512225.1| DNA repair protein RadC [Rhizobium etli 8C-3]
          Length = 274

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 69/97 (71%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274


>gi|26250960|ref|NP_757000.1| putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|117625240|ref|YP_854323.1| putative radC-like protein YeeS [Escherichia coli APEC O1]
 gi|26111392|gb|AAN83574.1|AE016771_85 Putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|70608386|gb|AAZ04458.1| putative RadC-like protein [Escherichia coli]
 gi|115514364|gb|ABJ02439.1| putative radC-like protein YeeS [Escherichia coli APEC O1]
 gi|323957540|gb|EGB53256.1| DNA repair protein RadC [Escherichia coli H263]
          Length = 158

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|16762580|ref|NP_458197.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16767014|ref|NP_462629.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29144069|ref|NP_807411.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62182222|ref|YP_218639.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|167549023|ref|ZP_02342782.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168235334|ref|ZP_02660392.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168241908|ref|ZP_02666840.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168260517|ref|ZP_02682490.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168464963|ref|ZP_02698855.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168818441|ref|ZP_02830441.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194447446|ref|YP_002047761.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194471766|ref|ZP_03077750.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194738096|ref|YP_002116664.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251672|ref|YP_002148661.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197264351|ref|ZP_03164425.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|198244011|ref|YP_002217690.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200388196|ref|ZP_03214808.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205354669|ref|YP_002228470.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858966|ref|YP_002245617.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213161281|ref|ZP_03346991.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213582558|ref|ZP_03364384.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213615654|ref|ZP_03371480.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213647926|ref|ZP_03377979.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213855129|ref|ZP_03383369.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|224585529|ref|YP_002639328.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238910236|ref|ZP_04654073.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289809998|ref|ZP_06540627.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
 gi|289824121|ref|ZP_06543718.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|54039003|sp|P65961|YICR_SALTI RecName: Full=UPF0758 protein yicR
 gi|54041784|sp|P65960|YICR_SALTY RecName: Full=UPF0758 protein yicR
 gi|73913738|sp|Q57IA4|YICR_SALCH RecName: Full=UPF0758 protein yicR
 gi|238689782|sp|B4TZY0|YICR_SALSV RecName: Full=UPF0758 protein yicR
 gi|238689997|sp|B5EXE3|YICR_SALA4 RecName: Full=UPF0758 protein yicR
 gi|238690228|sp|B4T9C3|YICR_SALHS RecName: Full=UPF0758 protein yicR
 gi|238690333|sp|B5FM62|YICR_SALDC RecName: Full=UPF0758 protein yicR
 gi|238690466|sp|B5R5G2|YICR_SALEP RecName: Full=UPF0758 protein yicR
 gi|238690538|sp|B5RGE9|YICR_SALG2 RecName: Full=UPF0758 protein yicR
 gi|254789657|sp|C0Q1X1|YICR_SALPC RecName: Full=UPF0758 protein yicR
 gi|25322100|pir||AD0971 probable DNA repair protein radC [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16422297|gb|AAL22588.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16504885|emb|CAD03264.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139706|gb|AAO71271.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62129855|gb|AAX67558.1| putative DNA repair protein, associated with replication forks
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|194405750|gb|ACF65969.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194458130|gb|EDX46969.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194713598|gb|ACF92819.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195632438|gb|EDX50922.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197215375|gb|ACH52772.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197242606|gb|EDY25226.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197291464|gb|EDY30816.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197938527|gb|ACH75860.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199605294|gb|EDZ03839.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205274450|emb|CAR39482.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205325640|gb|EDZ13479.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205338909|gb|EDZ25673.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205344387|gb|EDZ31151.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205350173|gb|EDZ36804.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206710769|emb|CAR35130.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224470057|gb|ACN47887.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|301160266|emb|CBW19789.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914755|dbj|BAJ38729.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320088149|emb|CBY97911.1| DNA repair protein radC homolog [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321226782|gb|EFX51832.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322612895|gb|EFY09847.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618960|gb|EFY15847.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625263|gb|EFY22090.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322630070|gb|EFY26843.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322634261|gb|EFY30996.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635838|gb|EFY32547.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322643024|gb|EFY39601.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322645048|gb|EFY41579.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649852|gb|EFY46275.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653059|gb|EFY49394.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322661122|gb|EFY57350.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662389|gb|EFY58602.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322667267|gb|EFY63433.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674356|gb|EFY70449.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322678436|gb|EFY74497.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322680942|gb|EFY76976.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687122|gb|EFY83095.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322716710|gb|EFZ08281.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323132089|gb|ADX19519.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323195846|gb|EFZ81018.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198237|gb|EFZ83343.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323200855|gb|EFZ85925.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323206609|gb|EFZ91567.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323210478|gb|EFZ95364.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216234|gb|EGA00962.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323220457|gb|EGA04911.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225320|gb|EGA09554.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323228434|gb|EGA12565.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323234255|gb|EGA18343.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323237240|gb|EGA21307.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244759|gb|EGA28763.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323245866|gb|EGA29856.1| hypothetical protein SEEM9199_16688 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323250951|gb|EGA34827.1| hypothetical protein SEEM8282_21207 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323257301|gb|EGA41000.1| hypothetical protein SEEM8283_22649 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262225|gb|EGA45786.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264564|gb|EGA48068.1| hypothetical protein SEEM8285_13785 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323268854|gb|EGA52312.1| hypothetical protein SEEM8287_17174 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326629808|gb|EGE36151.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 221

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD 
Sbjct: 125 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     ++I V DH+IIG+  +VSF     I
Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221


>gi|237704007|ref|ZP_04534488.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|226901919|gb|EEH88178.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
          Length = 163

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163


>gi|262392610|ref|YP_003284464.1| DNA repair protein RadC [Vibrio sp. Ex25]
 gi|262336204|gb|ACY49999.1| DNA repair protein RadC [Vibrio sp. Ex25]
          Length = 158

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + LI+ E    GTID   +Y RE+++  L  +A ++I  HNHPSG   PS AD 
Sbjct: 63  MFLDNQHQLISFEELFFGTIDAASIYPREVLKTALNHNAAAVIFAHNHPSGIAEPSQADK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +I  L  ++I V DHI++G +  VSF    +I
Sbjct: 123 RITQRLIDALKLVDIRVLDHIVVG-EGCVSFAEKGLI 158


>gi|326625474|gb|EGE31819.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 221

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD 
Sbjct: 125 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     ++I V DH+IIG+  +VSF     I
Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221


>gi|281181419|dbj|BAI57749.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 158

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|220927247|ref|YP_002502549.1| DNA repair protein RadC [Methylobacterium nodulans ORS 2060]
 gi|219951854|gb|ACL62246.1| DNA repair protein RadC [Methylobacterium nodulans ORS 2060]
          Length = 242

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/97 (65%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 146 LFLDKRNRLIADEVQGRGTVDHTPVYPREVVRRALELSATALILVHNHPSGDPTPSQADI 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++I+    PL I+VHDHI++G++   SFKGL++I
Sbjct: 206 RMTRDIVGAAEPLGIVVHDHIVVGREGHASFKGLKLI 242


>gi|117626422|ref|YP_859745.1| putative radC-like protein YeeS [Escherichia coli APEC O1]
 gi|115515546|gb|ABJ03621.1| putative radC-like protein YeeS [Escherichia coli APEC O1]
 gi|323950295|gb|EGB46176.1| DNA repair protein RadC [Escherichia coli H252]
 gi|323954374|gb|EGB50158.1| DNA repair protein RadC [Escherichia coli H263]
          Length = 158

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|260866447|ref|YP_003232849.1| putative DNA repair protein [Escherichia coli O111:H- str. 11128]
 gi|257762803|dbj|BAI34298.1| putative DNA repair protein [Escherichia coli O111:H- str. 11128]
          Length = 158

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|238760452|ref|ZP_04621590.1| DNA repair protein radC [Yersinia aldovae ATCC 35236]
 gi|238701347|gb|EEP93926.1| DNA repair protein radC [Yersinia aldovae ATCC 35236]
          Length = 222

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +I   + L+I V DH+++G+   VSF     +
Sbjct: 186 LMTTQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 222


>gi|218699408|ref|YP_002407037.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           IAI39]
 gi|218369394|emb|CAR17153.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           IAI39]
          Length = 158

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   P  AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPGKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|323951546|gb|EGB47421.1| DNA repair protein RadC [Escherichia coli H252]
          Length = 158

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|294666100|ref|ZP_06731358.1| DNA repair protein RadC [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604114|gb|EFF47507.1| DNA repair protein RadC [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 225

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++ +L  ++I + DH +IG    VSF     +
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSFAERGWL 224


>gi|284922002|emb|CBG35080.1| putative DNA repair protein [Escherichia coli 042]
          Length = 163

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+IIG     SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIIGGSQVFSFAEHGLL 163


>gi|238755011|ref|ZP_04616359.1| DNA repair protein RadC [Yersinia ruckeri ATCC 29473]
 gi|238706715|gb|EEP99084.1| DNA repair protein RadC [Yersinia ruckeri ATCC 29473]
          Length = 159

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E    G+I+   V+ REIV+  L  +A +++L HNHPSG   PS+AD 
Sbjct: 63  LFLDNQHRLLECETLFSGSINSSEVHPREIVKAALRHNAAAVVLAHNHPSGYAEPSEADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ  +  L  + + V DH ++G    VSF     +
Sbjct: 123 QVTQRTVNALTLVEVRVLDHFVVGGKEVVSFAERGWL 159


>gi|194445201|ref|YP_002042979.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|238693551|sp|B4SXE0|YICR_SALNS RecName: Full=UPF0758 protein yicR
 gi|194403864|gb|ACF64086.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
          Length = 221

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD 
Sbjct: 125 IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     ++I V DH+IIG+  +VSF     I
Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221


>gi|84386400|ref|ZP_00989428.1| DNA repair protein RadC-related protein [Vibrio splendidus 12B01]
 gi|84378824|gb|EAP95679.1| DNA repair protein RadC-related protein [Vibrio splendidus 12B01]
          Length = 157

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D+  SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDSCTSFAERGWL 157


>gi|330812589|ref|YP_004357051.1| putative DNA repair protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380697|gb|AEA72047.1| putative DNA repair protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 224

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + ++  E   RG+ID   V+ R++V+R L  +A ++IL HNHPSGN  PS AD 
Sbjct: 128 LFLNSKHQVLTFEALFRGSIDSASVHPRQVVKRALAHNAAALILCHNHPSGNTEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+G    +S      +
Sbjct: 188 VLTERLQEALELIDVRVLDHFIVGDGEPLSMAERGWM 224


>gi|323160906|gb|EFZ46830.1| DNA repair protein RadC family protein [Escherichia coli E128010]
          Length = 158

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|16129943|ref|NP_416506.1| CP4-44 prophage; predicted DNA repair protein [Escherichia coli
           str. K-12 substr. MG1655]
 gi|89108821|ref|AP_002601.1| predicted DNA repair protein [Escherichia coli str. K-12 substr.
           W3110]
 gi|170081631|ref|YP_001730951.1| CP4-44 prophage; DNA repair protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|218558883|ref|YP_002391796.1| DNA repair protein; CP4-44 prophage [Escherichia coli S88]
 gi|218690065|ref|YP_002398277.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|218695627|ref|YP_002403294.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
 gi|238901193|ref|YP_002926989.1| CP4-44 prophage; putative DNA repair protein [Escherichia coli
           BW2952]
 gi|3025155|sp|P76362|YEES_ECOLI RecName: Full=UPF0758 protein yeeS
 gi|1736671|dbj|BAA15826.1| predicted DNA repair protein [Escherichia coli str. K12 substr.
           W3110]
 gi|1788312|gb|AAC75063.1| CP4-44 prophage; predicted DNA repair protein [Escherichia coli
           str. K-12 substr. MG1655]
 gi|169889466|gb|ACB03173.1| CP4-44 prophage; predicted DNA repair protein [Escherichia coli
           str. K-12 substr. DH10B]
 gi|218352359|emb|CAU98132.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
 gi|218365652|emb|CAR03388.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli S88]
 gi|218427629|emb|CAR08539.2| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|238860616|gb|ACR62614.1| CP4-44 prophage; predicted DNA repair protein [Escherichia coli
           BW2952]
 gi|260448897|gb|ACX39319.1| DNA repair protein RadC [Escherichia coli DH1]
 gi|315136634|dbj|BAJ43793.1| DNA repair protein, RadC family [Escherichia coli DH1]
          Length = 148

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148


>gi|213418639|ref|ZP_03351705.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 167

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD 
Sbjct: 71  IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 130

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     ++I V DH+IIG+  +VSF     I
Sbjct: 131 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 167


>gi|161525489|ref|YP_001580501.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616]
 gi|189349783|ref|YP_001945411.1| DNA repair protein [Burkholderia multivorans ATCC 17616]
 gi|160342918|gb|ABX16004.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616]
 gi|189333805|dbj|BAG42875.1| DNA repair protein [Burkholderia multivorans ATCC 17616]
          Length = 169

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   V+ RE+V+  L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 73  LFLDTRHRLIDYAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +   L  +++   DHII+      SF    +I
Sbjct: 133 AMTSQLRQALALVDVRTLDHIIVAGGTTTSFAERGLI 169


>gi|26250393|ref|NP_756433.1| putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|26110823|gb|AAN83007.1|AE016769_122 Putative radC-like protein yeeS [Escherichia coli CFT073]
          Length = 148

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 148


>gi|73669792|ref|YP_305807.1| DNA repair protein RadC [Methanosarcina barkeri str. Fusaro]
 gi|121729469|sp|Q46A65|Y2303_METBF RecName: Full=UPF0758 protein Mbar_A2303
 gi|72396954|gb|AAZ71227.1| DNA replication and repair protein RadC [Methanosarcina barkeri
           str. Fusaro]
          Length = 229

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++ +EV S G+++   V+ RE+ +  L  S+ S+I++HNHPSG+P+PS  DI
Sbjct: 132 LCLDTKNQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMIHNHPSGDPSPSREDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L I V DHIIIG+  +VS K    +
Sbjct: 192 MVTEKMVEGGKLLGIDVLDHIIIGEGRYVSLKDEGFV 228


>gi|114762078|ref|ZP_01441546.1| DNA repair protein RadC [Pelagibaca bermudensis HTCC2601]
 gi|114545102|gb|EAU48105.1| DNA repair protein RadC [Roseovarius sp. HTCC2601]
          Length = 253

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 157 LFLDRKNVLIADEAQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSGADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I      L I +HDH++IG+   +SF+   ++
Sbjct: 217 EMTEQIRIAAEALGITLHDHLVIGRSRELSFRAEGLL 253


>gi|218707946|ref|YP_002415465.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           UMN026]
 gi|331650756|ref|ZP_08351784.1| putative DNA repair protein [Escherichia coli M718]
 gi|218435043|emb|CAR15996.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           UMN026]
 gi|323950625|gb|EGB46503.1| DNA repair protein RadC [Escherichia coli H252]
 gi|331051210|gb|EGI23259.1| putative DNA repair protein [Escherichia coli M718]
          Length = 163

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEYGLL 163


>gi|218510678|ref|ZP_03508556.1| DNA repair protein RadC [Rhizobium etli Brasil 5]
          Length = 274

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 69/97 (71%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274


>gi|170744786|ref|YP_001773441.1| DNA repair protein RadC [Methylobacterium sp. 4-46]
 gi|168199060|gb|ACA21007.1| DNA repair protein RadC [Methylobacterium sp. 4-46]
          Length = 247

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 66/97 (68%), Positives = 81/97 (83%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P+PS ADI
Sbjct: 151 LFLDKRNRLIADEVQGRGTVDHTPVYPREVVRRALELSATALILVHNHPSGDPSPSQADI 210

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++I+    PL I+VHDHII+G+D   SFKGL++I
Sbjct: 211 RMTRDIVGAAEPLGIVVHDHIIVGRDGHASFKGLKLI 247


>gi|308188656|ref|YP_003932787.1| DNA repair protein radC [Pantoea vagans C9-1]
 gi|308059166|gb|ADO11338.1| DNA repair protein radC [Pantoea vagans C9-1]
          Length = 218

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  +    G+I+ V V+ REIV+  L+L+A ++IL HNHPSG   PS AD 
Sbjct: 122 LFLDNQHRVLRAQNMFSGSINSVEVHPREIVREALKLNAAALILAHNHPSGMAEPSRADR 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +       +I + DH++IG   +VSF     +
Sbjct: 182 EVTHKVSEACQLFDIRLLDHLVIGHGEYVSFAERGWL 218


>gi|191167170|ref|ZP_03028990.1| DNA repair protein, RadC family [Escherichia coli B7A]
 gi|190902827|gb|EDV62556.1| DNA repair protein, RadC family [Escherichia coli B7A]
          Length = 158

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLTHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|226942456|ref|YP_002797529.1| DNA repair protein RadC [Azotobacter vinelandii DJ]
 gi|259551855|sp|C1DI57|Y294_AZOVD RecName: Full=UPF0758 protein Avin_02940
 gi|226717383|gb|ACO76554.1| P-pantothenate cysteine ligase / P-pantothenoylcysteine
           decarboxylase [Azotobacter vinelandii DJ]
          Length = 224

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV  +GT+D   VY R++++R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDAKHRVLAFEVLFQGTVDGASVYPRQVLKRALAHNAAALILTHNHPSGIAEPSQADF 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ V DH I+G    +S      +
Sbjct: 188 SLTRRLKEALALVDVRVLDHFIVGDGEPLSMAEQGWL 224


>gi|121594972|ref|YP_986868.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|120607052|gb|ABM42792.1| DNA repair protein RadC [Acidovorax sp. JS42]
          Length = 168

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI       GTID   V+ RE+V++ L L+A ++++ HNHPSG+P PS AD 
Sbjct: 72  LFLDTRHRLIDYVEMFHGTIDSAEVHPREVVKQALRLNAAAVVVSHNHPSGSPEPSAADR 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHII+  +A  SF    +I
Sbjct: 132 ALTQRLREALGLVDVRVLDHIIVAGNATASFAERGLI 168


>gi|193069504|ref|ZP_03050458.1| DNA repair protein, RadC family [Escherichia coli E110019]
 gi|192957252|gb|EDV87701.1| DNA repair protein, RadC family [Escherichia coli E110019]
          Length = 158

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A++++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNASAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|91210173|ref|YP_540159.1| putative radC-like protein YeeS [Escherichia coli UTI89]
 gi|312966012|ref|ZP_07780238.1| DNA repair RadC family protein [Escherichia coli 2362-75]
 gi|91071747|gb|ABE06628.1| putative radC-like protein YeeS [Escherichia coli UTI89]
 gi|294490760|gb|ADE89516.1| DNA repair protein, RadC family [Escherichia coli IHE3034]
 gi|307627505|gb|ADN71809.1| putative DNA repair protein [Escherichia coli UM146]
 gi|312289255|gb|EFR17149.1| DNA repair RadC family protein [Escherichia coli 2362-75]
          Length = 158

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|78049584|ref|YP_365759.1| DNA repair protein RadC [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|123583963|sp|Q3BNA4|Y4028_XANC5 RecName: Full=UPF0758 protein XCV4028
 gi|78038014|emb|CAJ25759.1| DNA repair protein RadC [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 225

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++ +L  ++I + DH +IG    VSF     +
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSFAERGWL 224


>gi|238798812|ref|ZP_04642281.1| DNA repair protein radC [Yersinia mollaretii ATCC 43969]
 gi|238717320|gb|EEQ09167.1| DNA repair protein radC [Yersinia mollaretii ATCC 43969]
          Length = 222

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +I   + L+I V DH+++G+   VSF     +
Sbjct: 186 LMTTQVIKACSILDIRVLDHLVVGRGECVSFAERGWL 222


>gi|51891509|ref|YP_074200.1| DNA repair protein [Symbiobacterium thermophilum IAM 14863]
 gi|81692227|sp|Q67SI7|Y371_SYMTH RecName: Full=UPF0758 protein STH371
 gi|51855198|dbj|BAD39356.1| DNA repair protein [Symbiobacterium thermophilum IAM 14863]
          Length = 234

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I  E  S GT+    V+ RE+ +  +  SA ++IL HNHPSG+P PS  D 
Sbjct: 136 ILLNAKNQVIDVECVSEGTLTASLVHPREVFKTAIRRSAHAVILAHNHPSGDPTPSREDR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DH+++G+  + SF+   ++
Sbjct: 196 EITRRLVQAGRVIGIEVLDHLVVGQGGYTSFRERGLL 232


>gi|190891537|ref|YP_001978079.1| DNA repair protein [Rhizobium etli CIAT 652]
 gi|226736627|sp|B3PXW5|Y1935_RHIE6 RecName: Full=UPF0758 protein RHECIAT_CH0001935
 gi|190696816|gb|ACE90901.1| DNA repair protein [Rhizobium etli CIAT 652]
          Length = 274

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 69/97 (71%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274


>gi|170680081|ref|YP_001743141.1| RadC family DNA repair protein [Escherichia coli SMS-3-5]
 gi|170517799|gb|ACB15977.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5]
          Length = 158

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADC 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|323945928|gb|EGB41970.1| DNA repair protein RadC [Escherichia coli H120]
          Length = 163

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEYGLL 163


>gi|331685379|ref|ZP_08385965.1| putative DNA repair protein [Escherichia coli H299]
 gi|323939165|gb|EGB35379.1| DNA repair protein RadC [Escherichia coli E482]
 gi|331077750|gb|EGI48962.1| putative DNA repair protein [Escherichia coli H299]
          Length = 158

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+IIG     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 158


>gi|288933007|ref|YP_003437066.1| DNA repair protein RadC [Klebsiella variicola At-22]
 gi|290511800|ref|ZP_06551168.1| DNA repair protein RadC [Klebsiella sp. 1_1_55]
 gi|288887736|gb|ADC56054.1| DNA repair protein RadC [Klebsiella variicola At-22]
 gi|289775590|gb|EFD83590.1| DNA repair protein RadC [Klebsiella sp. 1_1_55]
          Length = 221

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++++A ++IL HNHPSG+P PS AD 
Sbjct: 125 IFLDNQNRVLKHSRLFSGTLSHVEVHPREIVREAIKVNAAAVILAHNHPSGSPEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DH++IG+ A+VSF     I
Sbjct: 185 LITERVVKCCRFMEIRVLDHLVIGRGAYVSFAERGWI 221


>gi|26246178|ref|NP_752217.1| putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|18265872|gb|AAL67345.1|AF447814_13 intergenic-region protein [Escherichia coli]
 gi|26106575|gb|AAN78761.1|AE016755_261 Putative radC-like protein yeeS [Escherichia coli CFT073]
          Length = 163

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163


>gi|298382287|ref|ZP_06991884.1| radC-like protein yeeS [Escherichia coli FVEC1302]
 gi|298277427|gb|EFI18943.1| radC-like protein yeeS [Escherichia coli FVEC1302]
          Length = 158

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|261250535|ref|ZP_05943110.1| DNA repair protein RadC [Vibrio orientalis CIP 102891]
 gi|260939104|gb|EEX95091.1| DNA repair protein RadC [Vibrio orientalis CIP 102891]
          Length = 222

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GTID   VY RE+V+R LE +A ++IL HNHPSG   PS +D 
Sbjct: 126 LFLDNQHRVICGEPLFQGTIDAASVYPREVVKRSLEHNAAALILAHNHPSGVAEPSQSDR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I   L  ++I V DH ++G    VSF     I
Sbjct: 186 RITRRITDALALVDIRVLDHFVVGDGEIVSFAERGWI 222


>gi|260845828|ref|YP_003223606.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
 gi|257760975|dbj|BAI32472.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
          Length = 158

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGRQVFSFAEHGLL 158


>gi|206579335|ref|YP_002236000.1| DNA repair protein RadC [Klebsiella pneumoniae 342]
 gi|238054489|sp|B5XTG5|Y116_KLEP3 RecName: Full=UPF0758 protein KPK_0116
 gi|206568393|gb|ACI10169.1| DNA repair protein RadC [Klebsiella pneumoniae 342]
          Length = 221

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++++A ++IL HNHPSG+P PS AD 
Sbjct: 125 IFLDNQNRVLKHSRLFSGTLSHVEVHPREIVREAIKVNAAAVILAHNHPSGSPEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DH++IG+ A+VSF     I
Sbjct: 185 LITERVVKCCRFMEIRVLDHLVIGRGAYVSFAERGWI 221


>gi|21244634|ref|NP_644216.1| DNA repair protein RadC [Xanthomonas axonopodis pv. citri str. 306]
 gi|25009022|sp|Q8PFR3|Y3915_XANAC RecName: Full=UPF0758 protein XAC3915
 gi|21110318|gb|AAM38752.1| DNA repair protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 225

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++ +L  ++I + DH +IG    VSF     +
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSFAERGWL 224


>gi|146309390|ref|YP_001189855.1| DNA repair protein RadC [Pseudomonas mendocina ymp]
 gi|166218789|sp|A4Y0K7|Y4376_PSEMY RecName: Full=UPF0758 protein Pmen_4376
 gi|145577591|gb|ABP87123.1| DNA replication and repair protein RadC [Pseudomonas mendocina ymp]
          Length = 224

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV  RG+ID   VY R++V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDAKHRVLAFEVLFRGSIDSASVYPRQVVKRALANNAAAVILTHNHPSGVCEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  + + V DH I+G    +S   L  +
Sbjct: 188 VLTQRLKDALALVEVRVLDHFIVGDGEPLSMAELGWM 224


>gi|330503754|ref|YP_004380623.1| DNA repair protein RadC [Pseudomonas mendocina NK-01]
 gi|328918040|gb|AEB58871.1| DNA repair protein RadC [Pseudomonas mendocina NK-01]
          Length = 168

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A ++   HNHPSGNP PS AD 
Sbjct: 72  LFLDAKHRLIQYVEMFRGTIDSASVYPREVVKEALRLNAAAVFFAHNHPSGNPEPSQADK 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++   DHII+     VSF  L ++
Sbjct: 132 VLTQRLKEALALVDVRSLDHIIVAGQRTVSFAELGLL 168


>gi|319654115|ref|ZP_08008205.1| hypothetical protein HMPREF1013_04825 [Bacillus sp. 2_A_57_CT2]
 gi|317394200|gb|EFV74948.1| hypothetical protein HMPREF1013_04825 [Bacillus sp. 2_A_57_CT2]
          Length = 232

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N++I  +    G ++   V+ REI    ++ ++ SII+ H+HPSG+P PS  DI
Sbjct: 136 LFLNSKNVVIGKKTIFVGELNSCNVHPREIFHEAIQRTSASIIVAHSHPSGDPTPSREDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +      + I V DH+IIG   ++S K    +
Sbjct: 196 EMTKRLREAGELIGIPVLDHVIIGNGRYISLKEKGYL 232


>gi|74318606|ref|YP_316346.1| DNA repair protein RadC [Thiobacillus denitrificans ATCC 25259]
 gi|123611212|sp|Q3SFR5|Y2588_THIDA RecName: Full=UPF0758 protein Tbd_2588
 gi|74058101|gb|AAZ98541.1| DNA repair protein RadC [Thiobacillus denitrificans ATCC 25259]
          Length = 224

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +IA E   RGT+    VY REIV+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 VFLNAQNRVIAVEELFRGTLTQTSVYPREIVKRALAHNAAAMILAHNHPSGVNEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  ++I V DH II   + +SF     +
Sbjct: 188 SLTRRLAEALALVDIRVLDHFIIAGASALSFAEAGHL 224


>gi|15603017|ref|NP_246089.1| DNA repair protein RadC [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431801|sp|P57913|Y1152_PASMU RecName: Full=UPF0758 protein PM1152
 gi|12721500|gb|AAK03236.1| RadC [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 224

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   ++ REI++  L  +A ++IL HNHPSGNP PS +D 
Sbjct: 128 LFLDNQHRLIKQEEMFLGTINCTTIHPREIIKSALFCNAAALILAHNHPSGNPEPSASDK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      + I + DH +IGK  + SF   R++
Sbjct: 188 MVTTKIQAAAELVEIRILDHFVIGKGCYYSFAENRLL 224


>gi|304407507|ref|ZP_07389159.1| DNA repair protein RadC [Paenibacillus curdlanolyticus YK9]
 gi|304343458|gb|EFM09300.1| DNA repair protein RadC [Paenibacillus curdlanolyticus YK9]
          Length = 229

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++A ++ S GT++   V+ RE+ +  ++ S+ SII  HNHPSG+P PS  DI
Sbjct: 133 LFLNTKNQVVAKDMLSVGTLNASLVHPREVFREAIKRSSASIICAHNHPSGDPTPSPEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I V DH+IIG   FVS K   ++
Sbjct: 193 SLTRRLAEAGELIGIEVLDHLIIGDGKFVSLKEQGLL 229


>gi|302389307|ref|YP_003825128.1| DNA replication and repair protein RadC [Thermosediminibacter
           oceani DSM 16646]
 gi|302199935|gb|ADL07505.1| DNA replication and repair protein RadC [Thermosediminibacter
           oceani DSM 16646]
          Length = 237

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I+ E  S G+++   V+ RE+ +  ++ S+ +IILVHNHPSG+P PS  DI
Sbjct: 141 ILLNVKNRVISVEDISIGSLNSSIVHPREVFKPAIKRSSAAIILVHNHPSGDPTPSREDI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L I V DH+IIG  ++VSFK   ++
Sbjct: 201 EITRRLVEAGRILGIDVLDHVIIGNPSYVSFKEKGLL 237


>gi|209693807|ref|YP_002261735.1| DNA repair protein RadC [Aliivibrio salmonicida LFI1238]
 gi|238058401|sp|B6EPP3|Y192_ALISL RecName: Full=UPF0758 protein VSAL_I0192
 gi|208007758|emb|CAQ77877.1| DNA repair protein RadC [Aliivibrio salmonicida LFI1238]
          Length = 224

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  EV   GTID   VY RE+V+R ++ +A +IIL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVLKGEVLFEGTIDAAAVYPREVVKRSIDYNAAAIILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I   +  ++I V DH +IG    VSF     I
Sbjct: 188 RITKRISDAVELVDIRVLDHFVIGDGEIVSFAERGWI 224


>gi|92115088|ref|YP_575016.1| DNA repair protein RadC [Chromohalobacter salexigens DSM 3043]
 gi|122419198|sp|Q1QT91|Y2972_CHRSD RecName: Full=UPF0758 protein Csal_2972
 gi|91798178|gb|ABE60317.1| DNA replication and repair protein RadC [Chromohalobacter
           salexigens DSM 3043]
          Length = 224

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E  S+GT+D   VY RE+ +R L L+A ++I  HNHPSG   PSDAD 
Sbjct: 128 LFLDTQHRVIRFETLSKGTLDSASVYPREVSRRALALNAGALIFAHNHPSGVAEPSDADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L   +I V DH ++G    VSF     +
Sbjct: 188 RITQRLSDALGLFDIRVLDHFVVGDGEVVSFAERGWL 224


>gi|311281126|ref|YP_003943357.1| DNA repair protein RadC [Enterobacter cloacae SCF1]
 gi|308750321|gb|ADO50073.1| DNA repair protein RadC [Enterobacter cloacae SCF1]
          Length = 160

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LIA E    G+I    V+ RE+V+R L  +A ++IL HNHPSG+ +PS AD 
Sbjct: 64  LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALHFNAAAVILAHNHPSGDTSPSQADK 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++  L  ++I V DH+I+G    +SF    ++
Sbjct: 124 TITQRLVQALQLVDIRVPDHLIVGGTQILSFAEHGLL 160


>gi|50119106|ref|YP_048273.1| DNA repair protein RadC [Pectobacterium atrosepticum SCRI1043]
 gi|73913734|sp|Q6DAV7|Y145_ERWCT RecName: Full=UPF0758 protein ECA0145
 gi|49609632|emb|CAG73065.1| DNA repair protein [Pectobacterium atrosepticum SCRI1043]
          Length = 221

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI+ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 125 LFLDNQHHVIRHQEMFVGTINSVEVHPREIVREALKANAAALILAHNHPSGKAEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+     L I V DH++IG   FVSF     I
Sbjct: 185 AITEQIVKACLLLEIRVLDHLVIGHGEFVSFAERGWI 221


>gi|330824214|ref|YP_004387517.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
 gi|321116516|dbj|BAJ72215.1| DNA repair protein RadC [Acidovorax sp. KKS102]
 gi|329309586|gb|AEB84001.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
          Length = 168

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   V+ RE+V++ L L+A ++I+ HNHPSGN  PS AD 
Sbjct: 72  LFLDTRHRLIDYVEMFRGTIDAAEVHPREVVKQALRLNAAAVIVSHNHPSGNSEPSAADK 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +   L  ++I   DH+I+      SF    ++
Sbjct: 132 AMTSQLRQALALVDIRTLDHVIVAGTRTTSFAERGLL 168


>gi|146278797|ref|YP_001168956.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17025]
 gi|145557038|gb|ABP71651.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17025]
          Length = 261

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/97 (55%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS+ DI
Sbjct: 165 LFLDRKNVLIADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSEQDI 224

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      L I++HDH+I+G++  +SF+    +
Sbjct: 225 AMTGQIQDAAATLGIVLHDHLIVGRERELSFRAQGYL 261


>gi|222112697|ref|YP_002554961.1| DNA repair protein Radc [Acidovorax ebreus TPSY]
 gi|221732141|gb|ACM34961.1| DNA repair protein RadC [Acidovorax ebreus TPSY]
          Length = 169

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 73  LFLDSQHRLIEYTEMFRGTIDSASVYPRELVKEALRLNAAAVIVSHNHPSGNPEPSAADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +  +L  +++   DHI++   +  SF    +I
Sbjct: 133 ALTQRLKESLALVDVRTLDHIVVTGSSTTSFAERGLI 169


>gi|163793591|ref|ZP_02187566.1| DNA repair protein RadC [alpha proteobacterium BAL199]
 gi|159181393|gb|EDP65908.1| DNA repair protein RadC [alpha proteobacterium BAL199]
          Length = 229

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/97 (49%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LI DE Q RGT+DH P+Y RE+V+R LEL A+++I+VHNHPSG+P PS ADI
Sbjct: 133 LYLDRKNRLIRDERQGRGTVDHTPLYPREVVKRALELGASAVIVVHNHPSGDPTPSQADI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L+ L +I+HDH+I+ +    SF+   ++
Sbjct: 193 VVTRQLGEALSTLGLILHDHLIVARGGHTSFRSAGLL 229


>gi|24114260|ref|NP_708770.1| RADC family DNA repair protein [Shigella flexneri 2a str. 301]
 gi|30064313|ref|NP_838484.1| RADC family DNA repair protein [Shigella flexneri 2a str. 2457T]
 gi|24053414|gb|AAN44477.1| putative RADC family DNA repair protein [Shigella flexneri 2a str.
           301]
 gi|30042570|gb|AAP18294.1| putative RADC family DNA repair protein [Shigella flexneri 2a str.
           2457T]
 gi|281602347|gb|ADA75331.1| putative RADC family DNA repair protein [Shigella flexneri 2002017]
          Length = 163

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 163


>gi|157157651|ref|YP_001465824.1| RadC family DNA repair protein [Escherichia coli E24377A]
 gi|298378469|ref|ZP_06988353.1| radC-like protein yeeS [Escherichia coli FVEC1302]
 gi|157079681|gb|ABV19389.1| DNA repair protein, RadC family [Escherichia coli E24377A]
 gi|298280803|gb|EFI22304.1| radC-like protein yeeS [Escherichia coli FVEC1302]
          Length = 158

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEYGLL 158


>gi|320201859|gb|EFW76434.1| putative radC-like protein [Escherichia coli EC4100B]
          Length = 124

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 28  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 87

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 88  LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 124


>gi|170684134|ref|YP_001742412.1| RadC family DNA repair protein [Escherichia coli SMS-3-5]
 gi|170521852|gb|ACB20030.1| DNA repair protein, RadC family [Escherichia coli SMS-3-5]
          Length = 159

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LIA E    G+I    V+ RE+V+R L  +A ++IL HNHPSG+ +PS AD 
Sbjct: 63  LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTSPSKADK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++  L  ++I V DH+I+G    +SF    ++
Sbjct: 123 TITQRLVQALQLVDIRVPDHLIVGGTQILSFAEHGLL 159


>gi|26247156|ref|NP_753196.1| putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|331673519|ref|ZP_08374284.1| DNA repair protein, RADC family [Escherichia coli TA280]
 gi|26107557|gb|AAN79756.1|AE016759_30 Putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|307553028|gb|ADN45803.1| DNA repair protein [Escherichia coli ABU 83972]
 gi|331069313|gb|EGI40703.1| DNA repair protein, RADC family [Escherichia coli TA280]
          Length = 158

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|309704613|emb|CBJ03963.1| putative radC DNA repair protein [Escherichia coli ETEC H10407]
          Length = 148

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 148


>gi|296100494|ref|YP_003610640.1| DNA repair protein RadC [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295054953|gb|ADF59691.1| DNA repair protein RadC [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 222

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++L+A  +IL HNHPSG   PS AD 
Sbjct: 126 IFLDNRNRVLKHSHLFSGTLSHVEVHPREIVREAIKLNAAGVILAHNHPSGCAEPSRADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I+     ++I V DH+IIG+  ++SF     I
Sbjct: 186 EITDRIVKCCQFMDIRVLDHLIIGRGEYLSFAEHGWI 222


>gi|325928297|ref|ZP_08189499.1| DNA replication and repair protein RadC [Xanthomonas perforans
           91-118]
 gi|325541334|gb|EGD12874.1| DNA replication and repair protein RadC [Xanthomonas perforans
           91-118]
          Length = 243

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 146 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++ +L  ++I + DH +IG    VSF     +
Sbjct: 206 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSFAERGWL 242


>gi|221640666|ref|YP_002526928.1| DNA repair protein RadC [Rhodobacter sphaeroides KD131]
 gi|221161447|gb|ACM02427.1| DNA repair protein [Rhodobacter sphaeroides KD131]
          Length = 254

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PSD D+
Sbjct: 158 LYLDRKNVLIADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSDQDV 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      L I++HDH++IG+   VSF+G   +
Sbjct: 218 AMTAQIQEAAATLGIVLHDHLVIGRGREVSFRGQGYL 254


>gi|218692437|ref|YP_002400649.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|218702808|ref|YP_002410437.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           IAI39]
 gi|254162884|ref|YP_003045992.1| putative DNA repair protein [Escherichia coli B str. REL606]
 gi|218372794|emb|CAR20673.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           IAI39]
 gi|218430001|emb|CAR10981.2| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|253974785|gb|ACT40456.1| predicted DNA repair protein [Escherichia coli B str. REL606]
          Length = 148

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 148


>gi|311278018|ref|YP_003940249.1| DNA repair protein RadC [Enterobacter cloacae SCF1]
 gi|308747213|gb|ADO46965.1| DNA repair protein RadC [Enterobacter cloacae SCF1]
          Length = 160

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LIA E+   G+I    V+ RE+V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 64  LYLNQQNQLIAHEILFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++  L  ++I V DH+I+G    +SF    ++
Sbjct: 124 TITQRLVQALQLIDIRVPDHLIVGGSQILSFAEHGLL 160


>gi|256024477|ref|ZP_05438342.1| putative radC-like protein YeeS [Escherichia sp. 4_1_40B]
          Length = 158

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|268593307|ref|ZP_06127528.1| DNA repair protein RadC [Providencia rettgeri DSM 1131]
 gi|291311004|gb|EFE51457.1| DNA repair protein RadC [Providencia rettgeri DSM 1131]
          Length = 239

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +I  E   +GT++ V V+ REI++  ++++A  IIL HNHPSGNP PS AD 
Sbjct: 143 IFLNNKNQIICHEELFKGTLNKVEVHPREIIRFAIKMNANGIILAHNHPSGNPEPSTADR 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I + DH ++G    VSF     +
Sbjct: 203 QVTERIQRACAIMGIKLLDHFVVGHKQCVSFVERGWL 239


>gi|20090827|ref|NP_616902.1| DNA repair protein RadC [Methanosarcina acetivorans C2A]
 gi|25009026|sp|Q8TPD4|Y1979_METAC RecName: Full=UPF0758 protein MA_1979
 gi|19915895|gb|AAM05382.1| DNA repair protein [Methanosarcina acetivorans C2A]
          Length = 229

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N ++ +EV S G+++   V+ RE+ +  L  S+ S+I+VHNHPSG+P+PS  DI
Sbjct: 132 LYLDTKNQILKEEVVSIGSLNASIVHPREVFKSALLESSASVIMVHNHPSGDPSPSREDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L I + DHIIIG   +VS K    +
Sbjct: 192 MVTEKLVEGGKLLGIDILDHIIIGDGRYVSLKDEGFV 228


>gi|300905935|ref|ZP_07123664.1| putative DNA repair protein RadC [Escherichia coli MS 84-1]
 gi|300402241|gb|EFJ85779.1| putative DNA repair protein RadC [Escherichia coli MS 84-1]
          Length = 158

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGEPLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|123440463|ref|YP_001004457.1| DNA repair protein RadC [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166218800|sp|A1JHX2|Y063_YERE8 RecName: Full=UPF0758 protein YE0063
 gi|122087424|emb|CAL10205.1| putative DNA repair protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 222

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V ++ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEIHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +I   + L+I V DH+++G+   VSF     +
Sbjct: 186 LMTTQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 222


>gi|296104052|ref|YP_003614198.1| putative DNA repair protein [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295058511|gb|ADF63249.1| putative DNA repair protein [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 158

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LIA E    GTI+   V+ RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 62  LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 ALTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158


>gi|313648066|gb|EFS12512.1| DNA repair RadC family protein [Shigella flexneri 2a str. 2457T]
          Length = 158

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|218696658|ref|YP_002404325.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
 gi|218353390|emb|CAU99429.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
          Length = 148

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 148


>gi|56415619|ref|YP_152694.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197364546|ref|YP_002144183.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|73913739|sp|Q5PC30|YICR_SALPA RecName: Full=UPF0758 protein yicR
 gi|238690754|sp|B5BI12|YICR_SALPK RecName: Full=UPF0758 protein yicR
 gi|56129876|gb|AAV79382.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197096023|emb|CAR61610.1| putative DNA repair protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 221

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD 
Sbjct: 125 IFLDVQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     ++I V DH+IIG+  +VSF     I
Sbjct: 185 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221


>gi|21242914|ref|NP_642496.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108411|gb|AAM37032.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 169

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   V+ RE+V+  L  +A ++IL HNHPSG+P PS AD 
Sbjct: 73  LFLDTQHRLIEYTEMFRGTIDSASVHPREVVKEALRTNAAAVILAHNHPSGHPEPSTADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++   DHII+   A  SF    ++
Sbjct: 133 ALTRQLKAALELVDVRTLDHIIVAGGANTSFAERGLL 169


>gi|315296395|gb|EFU55695.1| DNA repair protein RadC family protein [Escherichia coli MS 16-3]
          Length = 159

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 63  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 123 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 159


>gi|294675779|ref|YP_003576394.1| DNA repair protein RadC [Rhodobacter capsulatus SB 1003]
 gi|294474599|gb|ADE83987.1| DNA repair protein RadC [Rhodobacter capsulatus SB 1003]
          Length = 254

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL A+++ILVHNHPSG+P PS ADI
Sbjct: 158 LFLDRKNLLIADEEQARGTVDHVPVYPREVVKRALELDASALILVHNHPSGDPTPSQADI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      L +++HDH++IGK   +SF+   ++
Sbjct: 218 AMTDQIRHAAEALGLVLHDHLVIGKGRELSFRAEGLL 254


>gi|110640540|ref|YP_668268.1| RadC-like DNA repair protein [Escherichia coli 536]
 gi|191171181|ref|ZP_03032731.1| DNA repair protein, RadC family [Escherichia coli F11]
 gi|28316258|emb|CAD66203.1| hypothetical protein [Escherichia coli]
 gi|110342132|gb|ABG68369.1| RadC-like DNA repair protein [Escherichia coli 536]
 gi|190908481|gb|EDV68070.1| DNA repair protein, RadC family [Escherichia coli F11]
          Length = 158

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|331654132|ref|ZP_08355132.1| putative DNA repair protein [Escherichia coli M718]
 gi|331047514|gb|EGI19591.1| putative DNA repair protein [Escherichia coli M718]
          Length = 163

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 163


>gi|309704104|emb|CBJ03451.1| putative radC-like protein [Escherichia coli ETEC H10407]
          Length = 158

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+IIG     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 158


>gi|332159686|ref|YP_004296263.1| DNA repair protein RadC [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|318603785|emb|CBY25283.1| DNA repair protein RadC [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325663916|gb|ADZ40560.1| DNA repair protein RadC [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330859989|emb|CBX70317.1| DNA repair protein radC homolog [Yersinia enterocolitica W22703]
          Length = 222

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V ++ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEIHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +I   + L+I V DH+++G+   VSF     +
Sbjct: 186 LMTTQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 222


>gi|254515838|ref|ZP_05127898.1| DNA repair protein RadC family [gamma proteobacterium NOR5-3]
 gi|219675560|gb|EED31926.1| DNA repair protein RadC family [gamma proteobacterium NOR5-3]
          Length = 224

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  +    GT+D   VY RE+V R L+  A +IIL HNHPSG   PS AD 
Sbjct: 128 LFLDSQHRLLHCDDLFLGTLDGAAVYPREVVVRALQYRAAAIILAHNHPSGLTQPSTADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH+I+G+    SF    +I
Sbjct: 188 RITQRLCDALALVDVPVLDHVIVGRGKCYSFAEAGLI 224


>gi|33151902|ref|NP_873255.1| DNA repair protein RadC [Haemophilus ducreyi 35000HP]
 gi|38372438|sp|Q7VN51|Y732_HAEDU RecName: Full=UPF0758 protein HD_0732
 gi|33148123|gb|AAP95644.1| DNA repair protein [Haemophilus ducreyi 35000HP]
          Length = 223

 Score =  134 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/96 (42%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  E    GTI+   V+ REI++  L+ +A +II+ HNHPSGN   S AD 
Sbjct: 124 LFLDNQNRLIKKEKMFYGTINQATVHPREIIKEALKCNAAAIIVAHNHPSGNCTASQADR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +TQ I    + + +   DHII+GK ++ SF+  R 
Sbjct: 184 QLTQKIKAACHLVEVRFVDHIIVGKGSYFSFEEERF 219


>gi|313109023|ref|ZP_07794996.1| RadC-like protein [Pseudomonas aeruginosa 39016]
 gi|310881498|gb|EFQ40092.1| RadC-like protein [Pseudomonas aeruginosa 39016]
          Length = 169

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D  + LI       GTID   VY RE+V+  L L+A ++++ HNHPSGNP PS AD 
Sbjct: 73  LFMDTRHRLIEYREMFHGTIDGASVYPREVVKEALRLNAAAVVVSHNHPSGNPEPSAADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHII+  +   SF    +I
Sbjct: 133 ALTQRLKEALGLVDVRVLDHIIVAGNETASFAEHGLI 169


>gi|301304730|ref|ZP_07210837.1| putative DNA repair protein RadC [Escherichia coli MS 124-1]
 gi|300839961|gb|EFK67721.1| putative DNA repair protein RadC [Escherichia coli MS 124-1]
 gi|315252324|gb|EFU32292.1| putative DNA repair protein RadC [Escherichia coli MS 85-1]
          Length = 158

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGEPLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|218561228|ref|YP_002394141.1| DNA repair protein; CP4-44 prophage [Escherichia coli S88]
 gi|218367997|emb|CAR05797.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli S88]
          Length = 148

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 148


>gi|194426265|ref|ZP_03058820.1| DNA repair protein, RadC family [Escherichia coli B171]
 gi|194415573|gb|EDX31840.1| DNA repair protein, RadC family [Escherichia coli B171]
 gi|323161557|gb|EFZ47445.1| DNA repair protein RadC family protein [Escherichia coli E128010]
          Length = 158

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADQ 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|91211289|ref|YP_541275.1| hypothetical protein UTI89_C2276 [Escherichia coli UTI89]
 gi|91213942|ref|YP_543928.1| hypothetical protein UTI89_C4994 [Escherichia coli UTI89]
 gi|110644738|ref|YP_672468.1| putative DNA repair protein [Escherichia coli 536]
 gi|191170846|ref|ZP_03032398.1| DNA repair protein, RadC family [Escherichia coli F11]
 gi|23954299|emb|CAD42098.1| hypothetical protein [Escherichia coli]
 gi|91072863|gb|ABE07744.1| hypothetical protein UTI89_C2276 [Escherichia coli UTI89]
 gi|91075516|gb|ABE10397.1| hypothetical protein UTI89_C4994 [Escherichia coli UTI89]
 gi|110346330|gb|ABG72567.1| putative DNA repair protein [Escherichia coli 536]
 gi|190909070|gb|EDV68657.1| DNA repair protein, RadC family [Escherichia coli F11]
 gi|307626452|gb|ADN70756.1| putative DNA repair protein [Escherichia coli UM146]
 gi|307629456|gb|ADN73760.1| putative DNA repair protein [Escherichia coli UM146]
 gi|330907975|gb|EGH36494.1| putative radC-like protein yeeS [Escherichia coli AA86]
          Length = 158

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|323152386|gb|EFZ38674.1| DNA repair radC domain protein [Escherichia coli EPECa14]
          Length = 148

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 148


>gi|306814130|ref|ZP_07448300.1| putative DNA repair protein [Escherichia coli NC101]
 gi|331656222|ref|ZP_08357184.1| intergenic-region protein [Escherichia coli TA206]
 gi|305852517|gb|EFM52966.1| putative DNA repair protein [Escherichia coli NC101]
 gi|307552078|gb|ADN44853.1| putative radC-like protein [Escherichia coli ABU 83972]
 gi|331054470|gb|EGI26479.1| intergenic-region protein [Escherichia coli TA206]
          Length = 158

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|218672510|ref|ZP_03522179.1| DNA repair protein RadC [Rhizobium etli GR56]
          Length = 274

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 69/97 (71%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274


>gi|300824031|ref|ZP_07104152.1| putative DNA repair protein RadC [Escherichia coli MS 119-7]
 gi|300523421|gb|EFK44490.1| putative DNA repair protein RadC [Escherichia coli MS 119-7]
          Length = 158

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|218698082|ref|YP_002405749.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
 gi|218354814|emb|CAV01931.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
          Length = 148

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 148


>gi|153870452|ref|ZP_01999852.1| DNA repair protein RadC [Beggiatoa sp. PS]
 gi|152073088|gb|EDN70154.1| DNA repair protein RadC [Beggiatoa sp. PS]
          Length = 242

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTID   VY RE+V+  L+ +A ++IL HNHPSG   PS+ADI
Sbjct: 146 LFLDNKHRVIKFEELFYGTIDGASVYPREVVKHTLQWNAAALILAHNHPSGVAEPSEADI 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +   L+ +++ V DH +IG    VS     +I
Sbjct: 206 SITQRLREALSLIDVRVLDHFVIGDGYCVSLMERGLI 242


>gi|332112547|gb|EGJ12340.1| hypothetical protein RBXJA2T_18503 [Rubrivivax benzoatilyticus JA2]
          Length = 225

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GT+    VY RE+ +R L L+A ++IL HNHPSG   PS AD 
Sbjct: 129 LFLDSQHRLIVMEEMFHGTLTQTSVYPREVARRALALNAGAVILAHNHPSGVAEPSRADE 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  L++ V DH+++G+   VS     ++
Sbjct: 189 FLTQTLRQALQLLDVRVLDHLVVGRGQVVSMAERGLV 225


>gi|15801143|ref|NP_287160.1| RadC family DNA repair protein [Escherichia coli O157:H7 EDL933]
 gi|12514552|gb|AAG55772.1|AE005313_7 putative DNA repair protein, RADC family [Escherichia coli O157:H7
           str. EDL933]
          Length = 158

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETXFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|218682712|ref|ZP_03530313.1| DNA repair protein RadC [Rhizobium etli CIAT 894]
          Length = 278

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 66/97 (68%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 182 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAMILVHNHPSGDPTPSRADI 241

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDH+IIGKD  VS KGL+++
Sbjct: 242 DMTKVIIDAAKALDITVHDHVIIGKDGHVSLKGLKLM 278


>gi|77464752|ref|YP_354256.1| DNA repair protein RadC [Rhodobacter sphaeroides 2.4.1]
 gi|77389170|gb|ABA80355.1| DNA repair protein [Rhodobacter sphaeroides 2.4.1]
          Length = 254

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PSD D+
Sbjct: 158 LYLDRKNVLIADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSDQDV 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I    + L I++HDH++IG+   VSF+G   +
Sbjct: 218 AMTAQIQEAASTLGIVLHDHLVIGRGREVSFRGQGYL 254


>gi|153833510|ref|ZP_01986177.1| DNA repair protein [Vibrio harveyi HY01]
 gi|148870161|gb|EDL69102.1| DNA repair protein [Vibrio harveyi HY01]
          Length = 157

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157


>gi|197334055|ref|YP_002154894.1| DNA repair protein RadC [Vibrio fischeri MJ11]
 gi|238690291|sp|B5FFF6|Y123_VIBFM RecName: Full=UPF0758 protein VFMJ11_0123
 gi|197315545|gb|ACH64992.1| DNA repair protein RadC [Vibrio fischeri MJ11]
          Length = 224

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+   GTID   VY RE+V+R ++ +A +IIL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVLKGEILFEGTIDAAAVYPREVVKRSIDYNAAAIILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I   +  ++I V DH +IG    VSF     I
Sbjct: 188 RITKRISDAVELVDIRVLDHFVIGDGEIVSFAERGWI 224


>gi|157156526|ref|YP_001464352.1| RadC family DNA repair protein [Escherichia coli E24377A]
 gi|157078556|gb|ABV18264.1| DNA repair protein, RadC family [Escherichia coli E24377A]
          Length = 158

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVIPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+IIG     SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 158


>gi|238794408|ref|ZP_04638019.1| DNA repair protein radC [Yersinia intermedia ATCC 29909]
 gi|238726309|gb|EEQ17852.1| DNA repair protein radC [Yersinia intermedia ATCC 29909]
          Length = 222

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 126 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +I   + L+I V DH+++G+   VSF     +
Sbjct: 186 LITTQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 222


>gi|323497063|ref|ZP_08102086.1| hypothetical protein VISI1226_16688 [Vibrio sinaloensis DSM 21326]
 gi|323317907|gb|EGA70895.1| hypothetical protein VISI1226_16688 [Vibrio sinaloensis DSM 21326]
          Length = 214

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + +I+ E   +GTID   VY RE+V+R LE +A ++I+ HNHPSG   PS +D 
Sbjct: 118 LYLDNQHRVISGESLFQGTIDAASVYPREVVKRSLEHNAAAVIIAHNHPSGVAEPSQSDR 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I   L  ++I + DH ++G    VSF     I
Sbjct: 178 RITRRISDALALVDIRILDHFVVGDGEIVSFAERGWI 214


>gi|86357475|ref|YP_469367.1| DNA repair protein RadC [Rhizobium etli CFN 42]
 gi|123512146|sp|Q2K946|Y1848_RHIEC RecName: Full=UPF0758 protein RHE_CH01848
 gi|86281577|gb|ABC90640.1| DNA repair protein [Rhizobium etli CFN 42]
          Length = 274

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 69/97 (71%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 178 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274


>gi|238789557|ref|ZP_04633341.1| DNA repair protein radC [Yersinia frederiksenii ATCC 33641]
 gi|238722310|gb|EEQ13966.1| DNA repair protein radC [Yersinia frederiksenii ATCC 33641]
          Length = 235

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 139 MFLDNQHRVIRHEEMFTGTISSVEVHPREIVRAALKVNAAALILAHNHPSGKAEPSQADR 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  ++   + L+I V DH+++G+   VSF     +
Sbjct: 199 LMTTQVVKACSLLDIRVLDHLVVGRGECVSFAERGWL 235


>gi|218560008|ref|YP_002392921.1| DNA repair protein; CP4-44 prophage [Escherichia coli S88]
 gi|218366777|emb|CAR04544.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli S88]
          Length = 148

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 148


>gi|188532227|ref|YP_001906024.1| DNA repair protein RadC [Erwinia tasmaniensis Et1/99]
 gi|188027269|emb|CAO95112.1| DNA repair protein RadC [Erwinia tasmaniensis Et1/99]
          Length = 223

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F D  + +I       GT++ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 127 IFFDNQHRVIHTSEMFSGTLNSVEVHPREIVREALKRNAAALILAHNHPSGLAEPSRADR 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ I+     +NI V DH++IG+  +VSF     +
Sbjct: 187 DITQQIVHACALMNIRVLDHMVIGRGEYVSFAERGWM 223


>gi|225175173|ref|ZP_03729169.1| DNA repair protein RadC [Dethiobacter alkaliphilus AHT 1]
 gi|225169349|gb|EEG78147.1| DNA repair protein RadC [Dethiobacter alkaliphilus AHT 1]
          Length = 232

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N ++  E  S G+++   V+ RE+ +  +  +  SIIL+HNHPSG+P PS  D+
Sbjct: 133 IMLDTKNKVLGIEEISIGSLNTSLVHPREVFRPAIRKACASIILIHNHPSGDPTPSREDL 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DHIIIG   F+SF+   ++
Sbjct: 193 DVTRRLREAGRLIGIEILDHIIIGDGKFISFREKGLL 229


>gi|152972484|ref|YP_001337630.1| DNA repair protein RadC [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238897079|ref|YP_002921825.1| DNA repair protein RadC [Klebsiella pneumoniae NTUH-K2044]
 gi|329996935|ref|ZP_08302632.1| DNA repair protein RadC [Klebsiella sp. MS 92-3]
 gi|166218784|sp|A6TFM9|Y3939_KLEP7 RecName: Full=UPF0758 protein KPN78578_39390
 gi|150957333|gb|ABR79363.1| DNA repair protein RadC [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238549407|dbj|BAH65758.1| DNA repair protein [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|328539225|gb|EGF65254.1| DNA repair protein RadC [Klebsiella sp. MS 92-3]
          Length = 221

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++++A ++IL HNHPSG+P PS AD 
Sbjct: 125 IFLDNQNRVLKHSRLFSGTLSHVEVHPREIVREAIKVNAAAVILAHNHPSGSPEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     + I V DH++IG+ A+VSF     I
Sbjct: 185 LITERVIKCCRFMEIRVLDHLVIGRGAYVSFAERGWI 221


>gi|213425229|ref|ZP_03357979.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
          Length = 198

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT++HV V+  EIV+  ++L+A+++IL HNHPSG   PS AD 
Sbjct: 102 IFLDAQHRVLQHSRLFSGTLNHVEVHPCEIVREAIKLNASAVILAHNHPSGCAEPSKADK 161

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     ++I V DH+IIG+  +VSF     I
Sbjct: 162 LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 198


>gi|91772435|ref|YP_565127.1| DNA repair protein RadC [Methanococcoides burtonii DSM 6242]
 gi|121684487|sp|Q12YU9|Y382_METBU RecName: Full=UPF0758 protein Mbur_0382
 gi|91711450|gb|ABE51377.1| DNA repair protein RadC [Methanococcoides burtonii DSM 6242]
          Length = 229

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +I +EV S G+++   V+ RE+ +  L  S+ S+IL HNHPSG+P PS  DI
Sbjct: 132 LYLDTKNNIIKEEVISIGSLNANIVHPREVFKSALMESSASVILTHNHPSGDPAPSREDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L I V DH+IIG   +VS K    I
Sbjct: 192 AVTEKLVEGGKILGISVLDHVIIGDGRYVSLKEEGYI 228


>gi|86146760|ref|ZP_01065080.1| DNA repair protein [Vibrio sp. MED222]
 gi|85835410|gb|EAQ53548.1| DNA repair protein [Vibrio sp. MED222]
          Length = 156

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + LI  E   +GTID   VY RE+V+  L+ +A ++I  HNHPSG+P PS AD 
Sbjct: 61  MLLDNQHRLIEFEELFQGTIDAASVYPREVVKTALKANAAAVIFAHNHPSGDPEPSQADK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DHI++G +   SF     +
Sbjct: 121 RITTRLQDALALIDVRVLDHIVVG-EQCTSFAERGWL 156


>gi|262040687|ref|ZP_06013925.1| DNA repair protein RadC [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042051|gb|EEW43084.1| DNA repair protein RadC [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 221

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++++A ++IL HNHPSG+P PS AD 
Sbjct: 125 IFLDNQNRVLKHSRLFSGTLSHVEVHPREIVREAIKVNAAAVILAHNHPSGSPEPSQADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     + I V DH++IG+ A+VSF     I
Sbjct: 185 LITERVIKCCRFMEIRVLDHLVIGRGAYVSFAERGWI 221


>gi|323969877|gb|EGB65155.1| DNA repair protein RadC [Escherichia coli TA007]
          Length = 158

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|315618026|gb|EFU98618.1| DNA repair radC domain protein [Escherichia coli 3431]
          Length = 108

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 12  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 71

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 72  LITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 108


>gi|144897615|emb|CAM74479.1| DNA repair protein RadC [Magnetospirillum gryphiswaldense MSR-1]
          Length = 237

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/97 (55%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE+Q +GT+DH P+Y RE+V+R L+L+A++II+VHNHPSG+P PS ADI
Sbjct: 141 LFLDRKNVLIADELQGQGTVDHTPLYPREVVKRALDLNASAIIMVHNHPSGDPAPSRADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ +   L  + I+VHDH+IIG+   VSFK   ++
Sbjct: 201 DMTKMVANALKGVGIVVHDHLIIGRKGHVSFKAQGLL 237


>gi|327192095|gb|EGE59073.1| DNA repair protein RadC [Rhizobium etli CNPAF512]
          Length = 274

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 68/97 (70%), Positives = 79/97 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEV  RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 178 LFLDKRNVLIADEVHGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 237

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 238 DMTKVIIEAAKALDITVHDHIIIGKDGHVSLKGLKLI 274


>gi|134298847|ref|YP_001112343.1| DNA repair protein RadC [Desulfotomaculum reducens MI-1]
 gi|134051547|gb|ABO49518.1| DNA replication and repair protein RadC [Desulfotomaculum reducens
           MI-1]
          Length = 231

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I  E  S GT++   V+ RE+ ++ +  SA ++ILVHNHPSG+P PS  DI
Sbjct: 135 LLLNTKNHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +I     + I V DHI++G D F S K   +I
Sbjct: 195 SLTKRLIEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231


>gi|218706553|ref|YP_002414072.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           UMN026]
 gi|218433650|emb|CAR14565.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           UMN026]
          Length = 148

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 148


>gi|260767607|ref|ZP_05876543.1| DNA repair protein RadC [Vibrio furnissii CIP 102972]
 gi|260617507|gb|EEX42690.1| DNA repair protein RadC [Vibrio furnissii CIP 102972]
          Length = 157

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157


>gi|261341753|ref|ZP_05969611.1| hypothetical protein ENTCAN_08232 [Enterobacter cancerogenus ATCC
           35316]
 gi|288316121|gb|EFC55059.1| DNA repair protein RadC [Enterobacter cancerogenus ATCC 35316]
          Length = 221

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++++A  +IL HNHPSG   PS AD 
Sbjct: 125 IFLDNKNRVLKHCHLFSGTLSHVEVHPREIVREAIKVNAAGVILAHNHPSGCAEPSRADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II     ++I V DH+IIG+  ++SF     I
Sbjct: 185 EITKRIIKCCQIMDIRVLDHLIIGRGEYLSFAEHGWI 221


>gi|56964380|ref|YP_176111.1| DNA repair protein RadC [Bacillus clausii KSM-K16]
 gi|73913732|sp|Q5WER0|Y2615_BACSK RecName: Full=UPF0758 protein ABC2615
 gi|56910623|dbj|BAD65150.1| DNA repair protein RadC [Bacillus clausii KSM-K16]
          Length = 230

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +  L+ S+ S+I +HNHPSG+P+PS  DI
Sbjct: 130 LYLNTKNHVIKQKTLFIGSLNASIVHPREVFKEALQSSSASVICLHNHPSGDPSPSPEDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ +      L I + DHII+G   F+S K    
Sbjct: 190 SVTKRLRQAGAILGIELLDHIIVGDGCFISLKERGF 225


>gi|56459351|ref|YP_154632.1| hypothetical protein IL0240 [Idiomarina loihiensis L2TR]
 gi|73913736|sp|Q5QZB4|Y240_IDILO RecName: Full=UPF0758 protein IL0240
 gi|56178361|gb|AAV81083.1| RadC [Idiomarina loihiensis L2TR]
          Length = 224

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + L+  E   +GTI+  PVY RE+++  ++ +A ++IL HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRLLRYEELFQGTINAAPVYPREVIKLVMQYNAAAVILAHNHPSGVAEPSQADQ 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH ++G    +SF    ++
Sbjct: 188 RVTERVKKALTLIDVALLDHFVVGAGDPISFAERGLL 224


>gi|254241654|ref|ZP_04934976.1| DNA repair protein RadC [Pseudomonas aeruginosa 2192]
 gi|126195032|gb|EAZ59095.1| DNA repair protein RadC [Pseudomonas aeruginosa 2192]
          Length = 169

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D  + LI      RGTID   VY RE V+  L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 73  LFMDTQHRLIEYAEMFRGTIDGASVYPRERVKEALRLNAAAVIVSHNHPSGNPEPSGADR 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH+I+      SF    +I
Sbjct: 133 ALTQRLKEALGLVDVRVLDHVIVAGTDTTSFAERGLI 169


>gi|117919701|ref|YP_868893.1| DNA repair protein RadC [Shewanella sp. ANA-3]
 gi|117612033|gb|ABK47487.1| DNA repair protein RadC [Shewanella sp. ANA-3]
          Length = 169

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A ++I  HNHPSGN  PS AD 
Sbjct: 73  LFLDSQHRLIEYTEMFRGTIDSASVYPREVVKEALRLNAAAVIFSHNHPSGNSEPSRADE 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++   DH+I+     +SF    +I
Sbjct: 133 AITNRLKEALALVDVRSLDHVIVAGSDTMSFAERGLI 169


>gi|293390968|ref|ZP_06635302.1| DNA repair protein RadC [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951502|gb|EFE01621.1| DNA repair protein RadC [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 219

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A +IIL HNHPSG   PS +D 
Sbjct: 123 LFLDNQHRLIKQERLFLGTINKAMVYPREIIKEALACNAAAIILAHNHPSGVAEPSISDK 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I    + ++I V DH +IG   + SF    ++
Sbjct: 183 QITDTIRQAADLVDIRVLDHFVIGNGRYFSFAEQNLL 219


>gi|254692435|emb|CAR48078.1| hypothetical protein [Escherichia coli]
          Length = 148

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADQ 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 148


>gi|153800936|ref|ZP_01955522.1| DNA repair protein [Vibrio cholerae MZO-3]
 gi|124123527|gb|EAY42270.1| DNA repair protein [Vibrio cholerae MZO-3]
          Length = 157

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDNCTSFAERGWL 157


>gi|328543235|ref|YP_004303344.1| DNA repair protein RadC [Polymorphum gilvum SL003B-26A1]
 gi|326412981|gb|ADZ70044.1| DNA repair protein RadC [Polymorphum gilvum SL003B-26A1]
          Length = 236

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 64/97 (65%), Positives = 79/97 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY RE+++R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 140 LFLDKRNGLIADEVQQRGTVDHTPVYPREVIRRALELSATAVILVHNHPSGDPTPSRADI 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I+    PL I VHDHII+G++  VSF+GL++I
Sbjct: 200 QMTRQIVDIAKPLGIEVHDHIIVGREGQVSFRGLQLI 236


>gi|222148674|ref|YP_002549631.1| DNA repair protein RadC [Agrobacterium vitis S4]
 gi|221735660|gb|ACM36623.1| DNA repair protein [Agrobacterium vitis S4]
          Length = 278

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 69/97 (71%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 182 LFLDKRNTLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 241

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II T  PL I VHDH+IIGK    S KGLR+I
Sbjct: 242 EMTKTIIDTAKPLGITVHDHVIIGKQGHASLKGLRLI 278


>gi|242239772|ref|YP_002987953.1| DNA repair protein RadC [Dickeya dadantii Ech703]
 gi|242131829|gb|ACS86131.1| DNA repair protein RadC [Dickeya dadantii Ech703]
          Length = 169

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD H+ LI       GTID   VY RE+V+  L L+A ++IL HNHPSGNP PS AD 
Sbjct: 73  LFLDTHHQLIEYREMFHGTIDSASVYPREVVKEALRLNAAAVILSHNHPSGNPEPSSADK 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  + +   DH+I+     VSF    +I
Sbjct: 133 ALTQRLKEALGLVEVRTLDHVIVAGADTVSFAERGLI 169


>gi|218561456|ref|YP_002394369.1| DNA repair protein; CP4-44 prophage [Escherichia coli S88]
 gi|218368225|emb|CAR06041.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli S88]
          Length = 148

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEYGLL 148


>gi|159184835|ref|NP_354601.2| DNA repair protein RadC [Agrobacterium tumefaciens str. C58]
 gi|25009015|sp|Q8UEZ6|Y1607_AGRT5 RecName: Full=UPF0758 protein Atu1607
 gi|159140119|gb|AAK87386.2| DNA repair protein [Agrobacterium tumefaciens str. C58]
          Length = 280

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 69/97 (71%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ +GT+DH PVY REIV+R LELS+T++IL+HNHPSG+P PS ADI
Sbjct: 184 LFLDKRNVLIADEVQGQGTVDHTPVYPREIVRRALELSSTALILIHNHPSGDPTPSRADI 243

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II T  PL I VHDHIIIGKD   SFKGLR+I
Sbjct: 244 EMTKTIIDTAKPLGITVHDHIIIGKDGHASFKGLRLI 280


>gi|146280868|ref|YP_001171021.1| DNA repair protein RadC [Pseudomonas stutzeri A1501]
 gi|166218790|sp|A4VGS8|Y473_PSEU5 RecName: Full=UPF0758 protein PST_0473
 gi|145569073|gb|ABP78179.1| DNA repair protein RadC [Pseudomonas stutzeri A1501]
          Length = 224

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV   GTID   VY R++V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDAKHRVLAFEVLFHGTIDGASVYPRQVVKRALAQNAAAVILTHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH I+G    +S      +
Sbjct: 188 QLTQRLKDALALIDVRVLDHFIVGDGEPLSMAEYGWM 224


>gi|258623772|ref|ZP_05718729.1| RadC-like protein [Vibrio mimicus VM603]
 gi|258583895|gb|EEW08687.1| RadC-like protein [Vibrio mimicus VM603]
          Length = 157

 Score =  133 bits (336), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157


>gi|293376482|ref|ZP_06622711.1| DNA repair protein RadC [Turicibacter sanguinis PC909]
 gi|325842026|ref|ZP_08167563.1| DNA repair protein RadC [Turicibacter sp. HGF1]
 gi|292644904|gb|EFF62985.1| DNA repair protein RadC [Turicibacter sanguinis PC909]
 gi|325489748|gb|EGC92104.1| DNA repair protein RadC [Turicibacter sp. HGF1]
          Length = 223

 Score =  133 bits (336), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I+ +    G+++   V+ RE+ +  ++ SA S+I  HNHPSG+P PS+ DI
Sbjct: 127 LFLDTKNYIISKKTIFIGSLNKAIVHPREVFKEAIKRSAASVICAHNHPSGDPTPSEQDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      + I V DH+IIG D FVS K    +
Sbjct: 187 GLTHRLYEAGELIGIKVLDHLIIGDDQFVSLKEKGYL 223


>gi|118581981|ref|YP_903231.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
 gi|166218787|sp|A1AV03|Y3582_PELPD RecName: Full=UPF0758 protein Ppro_3582
 gi|118504691|gb|ABL01174.1| DNA replication and repair protein RadC [Pelobacter propionicus DSM
           2379]
          Length = 229

 Score =  133 bits (336), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I     S G+++   V+ RE+  + ++ SA ++ILVHNHP+G+P PS  DI
Sbjct: 133 LLLDGKNRIIRRVQVSEGSLNQSIVHPREVFCQAVKESAAAVILVHNHPTGDPTPSQEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I V DHIIIG   ++SF    ++
Sbjct: 193 AITRRLKEAGEIMGIRVLDHIIIGDGEYLSFVERGVL 229


>gi|91228537|ref|ZP_01262458.1| DNA repair protein RadC [Vibrio alginolyticus 12G01]
 gi|91187913|gb|EAS74224.1| DNA repair protein RadC [Vibrio alginolyticus 12G01]
          Length = 155

 Score =  133 bits (336), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + LIA E    GTID   VY RE+++  L+++A ++I  HNHPSG+  PS AD 
Sbjct: 60  MFLDNQHRLIAFEELFFGTIDSASVYPREVLKAALKINAAALIFAHNHPSGDATPSQADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  ++I V DHI++G  A  SF    ++
Sbjct: 120 QITQRLKEALALVDIRVLDHIVVGDSAI-SFAERGLL 155


>gi|116251828|ref|YP_767666.1| DNA repair protein RadC [Rhizobium leguminosarum bv. viciae 3841]
 gi|226736628|sp|Q1MHK3|Y2068_RHIL3 RecName: Full=UPF0758 protein RL2068
 gi|115256476|emb|CAK07560.1| putative DNA repair protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 275

 Score =  133 bits (336), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 67/97 (69%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+++LVHNHPSG+P PS ADI
Sbjct: 179 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAMVLVHNHPSGDPTPSRADI 238

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDHIIIGKD  VS KGL++I
Sbjct: 239 DMTKVIIDAAKALDITVHDHIIIGKDGHVSLKGLKLI 275


>gi|213029140|ref|ZP_03343587.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 129

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT++HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD 
Sbjct: 33  IFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 92

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     ++I V DH+IIG+  +VSF     I
Sbjct: 93  LITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 129


>gi|56476855|ref|YP_158444.1| RadC family DNA repair protein [Aromatoleum aromaticum EbN1]
 gi|56312898|emb|CAI07543.1| DNA repair protein similar to radC-family [Aromatoleum aromaticum
           EbN1]
          Length = 164

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   +GT+D   VY R +VQR L L+A+++IL H HPSGN  PS AD 
Sbjct: 68  VFLDNQHQVLAFEPLFKGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + + L  +++ V DH I+GK +  SF    ++
Sbjct: 128 AITERLKSALATVDVRVLDHFIVGKGSPYSFAEAGLL 164


>gi|15836753|ref|NP_297441.1| DNA repair protein RadC [Xylella fastidiosa 9a5c]
 gi|9104937|gb|AAF82961.1|AE003868_7 DNA repair protein [Xylella fastidiosa 9a5c]
          Length = 232

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  I+ E    GTI+   V+ RE+V+R L L+A ++I+ HNHPSGN  PS AD 
Sbjct: 136 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ +++ + DH +IG  A VSF     +
Sbjct: 196 MITQRLKNALDLIDVRLVDHFVIGDGAPVSFAEHGWL 232


>gi|124267582|ref|YP_001021586.1| DNA repair protein [Methylibium petroleiphilum PM1]
 gi|124260357|gb|ABM95351.1| DNA repair protein [Methylibium petroleiphilum PM1]
          Length = 164

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   +GT+D   VY R +VQR L L+A+++IL H HPSGN  PS AD 
Sbjct: 68  VFLDNQHQVLAFEPLFKGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + + L  +++ V DH I+GK +  SF    ++
Sbjct: 128 AITERLKSALATVDVRVLDHFIVGKGSPYSFAEAGLL 164


>gi|260912778|ref|ZP_05919264.1| DNA repair protein RadC [Pasteurella dagmatis ATCC 43325]
 gi|260633156|gb|EEX51321.1| DNA repair protein RadC [Pasteurella dagmatis ATCC 43325]
          Length = 214

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    LI  E    GTI+   V+ REI++  L  +A ++IL HNHPSG   PS++D 
Sbjct: 118 LFLDNQQRLIKQEEMFLGTINMATVHPREIIKAALYCNAAALILAHNHPSGIAEPSESDK 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I      + I + DH IIGK  + SF    ++
Sbjct: 178 RITQKIKNVAELMEIRILDHFIIGKGCYTSFAENGLL 214


>gi|302878190|ref|YP_003846754.1| DNA repair protein RadC [Gallionella capsiferriformans ES-2]
 gi|302580979|gb|ADL54990.1| DNA repair protein RadC [Gallionella capsiferriformans ES-2]
          Length = 205

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E    GT+    VY RE+V+R L  +A +++L HNHPSG   PS AD 
Sbjct: 109 LFLDTQHRLIAAEELFHGTLTQTSVYPREVVKRALMHNAAAVLLAHNHPSGLAEPSQADQ 168

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++   DH IIG ++ +SF    +I
Sbjct: 169 LLTNALKQALALVDVRALDHFIIGDESALSFAERGLI 205


>gi|167621616|ref|YP_001672124.1| DNA repair protein RadC [Caulobacter sp. K31]
 gi|167351739|gb|ABZ74465.1| DNA repair protein RadC [Caulobacter sp. K31]
          Length = 253

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+ + GT+DH PVY RE+V+R LE+SA+++ILVHNHPSG+  PS ADI
Sbjct: 157 LFLDKKNQLIADEILNHGTVDHAPVYPREVVRRALEVSASAVILVHNHPSGDQTPSSADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ ++     L I VHDH+I+G+    SFK L +I
Sbjct: 217 EMTKKVVDAARTLGIAVHDHVIVGRAEVASFKALGLI 253


>gi|300916723|ref|ZP_07133437.1| putative DNA repair protein RadC [Escherichia coli MS 115-1]
 gi|300415989|gb|EFJ99299.1| putative DNA repair protein RadC [Escherichia coli MS 115-1]
          Length = 158

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LIA E    GTI+   V+ RE+V+R L  +A ++ILVHNHPSG   PS AD 
Sbjct: 62  LYLDNQNQLIAHETLFSGTINRTEVHPREVVKRALHFNAAAVILVHNHPSGETTPSQADK 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  ++I + DH+I+G     SF    ++
Sbjct: 122 ALTQRLTQVLQLVDIRIPDHLIVGGRQIYSFAEHGLL 158


>gi|283787728|ref|YP_003367593.1| DNA repair protein [Citrobacter rodentium ICC168]
 gi|282951182|emb|CBG90875.1| DNA repair protein [Citrobacter rodentium ICC168]
          Length = 221

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT+ HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 125 IFLDTQHKVIKHSRLFSGTLSHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     ++I V DH++IG+  +VSF     I
Sbjct: 185 LITERVIKCCQFMDIRVLDHLVIGRGEYVSFAERGWI 221


>gi|294625196|ref|ZP_06703838.1| DNA repair protein RadC [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600515|gb|EFF44610.1| DNA repair protein RadC [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 225

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+ D 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEPDR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++ +L  ++I + DH +IG    VSF     +
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSFAERGWL 224


>gi|220933291|ref|YP_002512190.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7]
 gi|254789667|sp|B8GTE3|Y100_THISH RecName: Full=UPF0758 protein Tgr7_0100
 gi|219994601|gb|ACL71203.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7]
          Length = 223

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E   RGTID   V+ RE+V+R L  +A ++IL HNHPSG   PS +D 
Sbjct: 128 LFLDNRHRVIAFEELFRGTIDGASVHPREVVRRALAHNAAALILAHNHPSGVAEPSRSDE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I V DH+++G  + VSF    ++
Sbjct: 188 AITRRLRDALALVDIRVLDHVVVGD-SLVSFAERGLL 223


>gi|238794329|ref|ZP_04637941.1| radC-like protein yeeS [Yersinia intermedia ATCC 29909]
 gi|238726323|gb|EEQ17865.1| radC-like protein yeeS [Yersinia intermedia ATCC 29909]
          Length = 159

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N L+A E    GT+ H  V+ RE+V+R L  +A ++I  HNHPSG   PS AD 
Sbjct: 63  LYLNNQNQLLAHETLFTGTLSHTEVHPREVVKRALYFNAAAVIFAHNHPSGEVAPSQADK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++  L  + I V DH+I+G     SF    +I
Sbjct: 123 AITQRLVQALMLVEIRVPDHLIVGGRQIFSFAEHGLI 159


>gi|260587686|ref|ZP_05853599.1| DNA repair protein RadC [Blautia hansenii DSM 20583]
 gi|331084025|ref|ZP_08333132.1| hypothetical protein HMPREF0992_02056 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260541951|gb|EEX22520.1| DNA repair protein RadC [Blautia hansenii DSM 20583]
 gi|330402387|gb|EGG81957.1| hypothetical protein HMPREF0992_02056 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 231

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+ DE+  +GT++      REI    +   A  I+LVHNHPSG+  PS AD+
Sbjct: 135 MMLDTKNHLLGDEMIFKGTVNSSLANPREIFLSAVSYHAVGILLVHNHPSGDCTPSQADV 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           + TQ +      L I + DHIIIG   ++SF+   I
Sbjct: 195 DFTQRVKEAGELLGIPLLDHIIIGDCKYLSFREQGI 230


>gi|328471743|gb|EGF42620.1| DNA repair protein [Vibrio parahaemolyticus 10329]
          Length = 157

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTLDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157


>gi|172046060|sp|A8FFU0|Y2444_BACP2 RecName: Full=UPF0758 protein BPUM_2444
          Length = 224

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++       G+++   V+ REI +   + SA S I VHNHPSG+P PS  DI
Sbjct: 128 LYLNTKNQVLHKHTVFIGSLNSSIVHPREIFKEAFKRSAASFICVHNHPSGDPTPSREDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I + DH++IG   FVS K    +
Sbjct: 188 EVTQRLFECGKLIGIQLLDHLVIGDQKFVSLKEKGYL 224


>gi|331654543|ref|ZP_08355543.1| intergenic-region protein [Escherichia coli M718]
 gi|331047925|gb|EGI20002.1| intergenic-region protein [Escherichia coli M718]
          Length = 163

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LI  E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLITGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVIPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+IIG     SF    ++
Sbjct: 127 LITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL 163


>gi|260581787|ref|ZP_05849584.1| DNA repair protein RadC [Haemophilus influenzae NT127]
 gi|260095380|gb|EEW79271.1| DNA repair protein RadC [Haemophilus influenzae NT127]
          Length = 234

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 138 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 234


>gi|290488|gb|AAA61991.1| differs from radC sequence in X63366; similar to S. aureus putative
           25 kD protein [Escherichia coli]
          Length = 224

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224


>gi|218697844|ref|YP_002405511.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
 gi|12643227|gb|AAK00479.1| unknown [Shigella flexneri 2a]
 gi|218354576|emb|CAV01492.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           55989]
          Length = 148

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVPPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 112 LITERLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 148


>gi|37678709|ref|NP_933318.1| DNA repair protein [Vibrio vulnificus YJ016]
 gi|37197450|dbj|BAC93289.1| DNA repair protein [Vibrio vulnificus YJ016]
          Length = 157

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  +   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGNTCTSFAERGWL 157


>gi|134300388|ref|YP_001113884.1| DNA repair protein RadC [Desulfotomaculum reducens MI-1]
 gi|172044335|sp|A4J7K6|Y2549_DESRM RecName: Full=UPF0758 protein Dred_2549
 gi|134053088|gb|ABO51059.1| DNA replication and repair protein RadC [Desulfotomaculum reducens
           MI-1]
          Length = 227

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N ++A E  S GT++   V+ RE+ +  +  SA S+ILVHNHPSG+P PS  DI
Sbjct: 131 LLLNTKNQVLARETISIGTLNSSVVHPRELFKVAIRRSAASMILVHNHPSGDPTPSREDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     + I V DHIIIG + F S K   +I
Sbjct: 191 VLTKRLIEAGEIIGIDVLDHIIIGDNKFTSLKSKGLI 227


>gi|88705460|ref|ZP_01103171.1| DNA repair protein RadC [Congregibacter litoralis KT71]
 gi|88700550|gb|EAQ97658.1| DNA repair protein RadC [Congregibacter litoralis KT71]
          Length = 224

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E    GT+D   VY RE+V R L   A +++L HNHPSG  +PS AD 
Sbjct: 128 LFLDSQHHLLCCEDVFSGTLDGAAVYPREVVLRALHHRAAAVVLAHNHPSGLTHPSSADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +   L  ++I V DH IIG+    SF    ++
Sbjct: 188 HITQRLRDALALVDIRVLDHFIIGRGRSYSFAEAGLL 224


>gi|241204438|ref|YP_002975534.1| DNA repair protein RadC [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858328|gb|ACS55995.1| DNA repair protein RadC [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 275

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 67/97 (69%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 179 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATALILVHNHPSGDPTPSRADI 238

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDH+IIGKD  VS KGL++I
Sbjct: 239 DMTKVIIDAAKALDITVHDHVIIGKDGHVSLKGLKLI 275


>gi|152994658|ref|YP_001339493.1| DNA repair protein RadC [Marinomonas sp. MWYL1]
 gi|189029397|sp|A6VSX9|Y624_MARMS RecName: Full=UPF0758 protein Mmwyl1_0624
 gi|150835582|gb|ABR69558.1| DNA repair protein RadC [Marinomonas sp. MWYL1]
          Length = 224

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +    GTID   VY RE+V+  L+ +A ++IL HNHPSG   PS ADI
Sbjct: 128 LFLDTQHRLIRYQELFMGTIDAAAVYPREVVKAALQYNAAAVILAHNHPSGIAEPSQADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I   L+ +++ + DH ++G    VS     ++
Sbjct: 188 SITDKIKRALDLVDVRLLDHFVVGDGLPVSLAERGLV 224


>gi|310829102|ref|YP_003961459.1| DNA repair protein RadC [Eubacterium limosum KIST612]
 gi|308740836|gb|ADO38496.1| DNA repair protein RadC [Eubacterium limosum KIST612]
          Length = 234

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I  E  S GTI+   V+ RE+  + +   A ++IL HNHPSG+P PS  D 
Sbjct: 138 LLLDNKNKVIKTETISIGTINASLVHPREVFVKAIRQHAAAVILAHNHPSGDPKPSAEDR 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++ +   L I V DH++IG   +VSFK    I
Sbjct: 198 AITKRLLESGELLGIPVLDHVVIGGADYVSFKESGYI 234


>gi|217969374|ref|YP_002354608.1| DNA repair protein RadC [Thauera sp. MZ1T]
 gi|217506701|gb|ACK53712.1| DNA repair protein RadC [Thauera sp. MZ1T]
          Length = 164

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   +GT+D   VY R +VQR L L+A+++IL H HPSGN  PS AD 
Sbjct: 68  VFLDNQHQVLAFEPLFQGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + + L  +++ V DH I+GK +  SF    ++
Sbjct: 128 AITERLKSALATVDVRVLDHFIVGKGSPYSFAEAGLL 164


>gi|121594529|ref|YP_986425.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|120606609|gb|ABM42349.1| DNA repair protein RadC [Acidovorax sp. JS42]
          Length = 164

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   +GT+D   VY R +VQR L L+A+++IL H HPSGN  PS AD 
Sbjct: 68  VFLDNQHQVLAFEPLFKGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + + L  +++ V DH I+GK +  SF    ++
Sbjct: 128 AITERLKSALATVDVRVLDHFIVGKGSPYSFAEAGLL 164


>gi|114330795|ref|YP_747017.1| DNA repair protein RadC [Nitrosomonas eutropha C91]
 gi|122314267|sp|Q0AHY0|Y782_NITEC RecName: Full=UPF0758 protein Neut_0782
 gi|114307809|gb|ABI59052.1| DNA replication and repair protein RadC [Nitrosomonas eutropha C91]
          Length = 224

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  +  I  E   RGT+    VY RE+V+R L  +A ++I  HNHPSG   PS AD 
Sbjct: 128 IFLDARHRTIMIEELFRGTLTQASVYPREVVKRALYHNAAAMIFAHNHPSGVAEPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ++   L  +++ V DH +IG +  VSF    +I
Sbjct: 188 MLTQSLKQALALVDVKVLDHFVIGNNETVSFAERGLI 224


>gi|82779592|ref|YP_405941.1| putative DNA repair protein [Shigella dysenteriae Sd197]
 gi|309787459|ref|ZP_07682071.1| DNA repair RadC family protein [Shigella dysenteriae 1617]
 gi|81243740|gb|ABB64450.1| putative DNA repair protein [Shigella dysenteriae Sd197]
 gi|308925037|gb|EFP70532.1| DNA repair RadC family protein [Shigella dysenteriae 1617]
          Length = 158

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRSLYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 122 LITERLVQALALVDIRVPDHLIVGGNQVFSFAEHGLL 158


>gi|331654133|ref|ZP_08355133.1| putative DNA repair protein [Escherichia coli M718]
 gi|331047515|gb|EGI19592.1| putative DNA repair protein [Escherichia coli M718]
          Length = 105

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 9   LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 68

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 69  LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 105


>gi|327479136|gb|AEA82446.1| DNA repair protein RadC [Pseudomonas stutzeri DSM 4166]
          Length = 224

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV   GTID   VY R++V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDAKHRVLAFEVLFHGTIDGASVYPRQVVKRALAQNAAAVILTHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH I+G    +S      +
Sbjct: 188 QLTQRLKDALALIDVRVLDHFIVGDGEPLSMAEYGWM 224


>gi|188578899|ref|YP_001915828.1| DNA repair protein RadC [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|172044625|sp|Q5H5M1|Y495_XANOR RecName: Full=UPF0758 protein XOO0495
 gi|238689548|sp|B2SS21|Y2919_XANOP RecName: Full=UPF0758 protein PXO_02919
 gi|188523351|gb|ACD61296.1| DNA repair protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 225

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSKADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++ +L  ++I + DH +IG    VS      +
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSLAERGWL 224


>gi|59710733|ref|YP_203509.1| DNA repair protein RadC [Vibrio fischeri ES114]
 gi|71648820|sp|Q5E8M5|Y126_VIBF1 RecName: Full=UPF0758 protein VF_0126
 gi|59478834|gb|AAW84621.1| protein associated with replication fork, possible DNA repair
           protein [Vibrio fischeri ES114]
          Length = 224

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+   GTID   VY RE+V+R ++ +A +IIL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVLKGEILFEGTIDVAAVYPREVVKRSIDYNAAAIILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I   +  ++I V DH +IG    VSF     I
Sbjct: 188 RITKRISDAVELVDIRVLDHFVIGDGEIVSFAERGWI 224


>gi|89110373|ref|AP_004153.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli str. K-12 substr. W3110]
 gi|162135914|ref|NP_418095.4| conserved protein, UPF0758 family; not radC [Escherichia coli str.
           K-12 substr. MG1655]
 gi|170083146|ref|YP_001732466.1| protein associated with replication fork, DNA repair protein
           [Escherichia coli str. K-12 substr. DH10B]
 gi|238902729|ref|YP_002928525.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli BW2952]
 gi|6686314|sp|P25531|YICR_ECOLI RecName: Full=UPF0758 protein yicR
 gi|229485552|sp|B1X972|YICR_ECODH RecName: Full=UPF0758 protein yicR
 gi|259551860|sp|C4ZXN0|YICR_ECOBW RecName: Full=UPF0758 protein yicR
 gi|85676404|dbj|BAE77654.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli str. K12 substr. W3110]
 gi|87082300|gb|AAC76662.2| conserved protein, UPF0758 family; not radC [Escherichia coli str.
           K-12 substr. MG1655]
 gi|169890981|gb|ACB04688.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|238863294|gb|ACR65292.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli BW2952]
 gi|260447343|gb|ACX37765.1| DNA repair protein RadC [Escherichia coli DH1]
 gi|315138220|dbj|BAJ45379.1| DNA repair protein RadC [Escherichia coli DH1]
          Length = 222

 Score =  133 bits (335), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|326405093|ref|YP_004285175.1| hypothetical protein ACMV_29460 [Acidiphilium multivorum AIU301]
 gi|325051955|dbj|BAJ82293.1| hypothetical protein ACMV_29460 [Acidiphilium multivorum AIU301]
          Length = 266

 Score =  133 bits (335), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 48/97 (49%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N L+ADEV SRGT++H  VY+RE+V+R +E  AT++ILVHNHPSG+P+PS  D+
Sbjct: 165 IYLDNRNRLLADEVASRGTVNHTQVYVREVVRRAIETRATALILVHNHPSGDPSPSRDDV 224

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +   +  L+I +HDH+IIGK  ++SF+    +
Sbjct: 225 EMTREVQRAVALLDITLHDHVIIGKAGWLSFRREGFL 261


>gi|313200117|ref|YP_004038775.1| DNA repair protein radc [Methylovorus sp. MP688]
 gi|312439433|gb|ADQ83539.1| DNA repair protein RadC [Methylovorus sp. MP688]
          Length = 224

 Score =  133 bits (335), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++A E    GT+    V+ REIV+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 IFLDAQNRVLAHEEMFAGTLTQTSVHPREIVKRALYYNAGAVILAHNHPSGVAEPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  + T L+ +++ V DH ++  +  +SF    ++
Sbjct: 188 MITAQLKTALDLVDVRVLDHFVVAGNTTLSFAERGLL 224


>gi|218691142|ref|YP_002399354.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|331681607|ref|ZP_08382243.1| intergenic-region protein [Escherichia coli H299]
 gi|218428706|emb|CAR09496.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
           ED1a]
 gi|331081181|gb|EGI52343.1| intergenic-region protein [Escherichia coli H299]
          Length = 148

 Score =  133 bits (335), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 148


>gi|238750954|ref|ZP_04612451.1| radC-like protein yeeS [Yersinia rohdei ATCC 43380]
 gi|238710868|gb|EEQ03089.1| radC-like protein yeeS [Yersinia rohdei ATCC 43380]
          Length = 159

 Score =  133 bits (335), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N L+A E    GTI H  V+ RE+V+R L  +A ++I  HNHPSG   PS AD 
Sbjct: 63  LYLNNQNQLLAHETLFTGTISHTEVHPREVVKRALYFNAAAVIFAHNHPSGEVAPSQADK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++  L  + I V DH+I+G     SF    +I
Sbjct: 123 AITQRLVQALMLVEIRVPDHLIVGGRQIFSFAEHGLI 159


>gi|220935036|ref|YP_002513935.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996346|gb|ACL72948.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7]
          Length = 168

 Score =  133 bits (335), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI       GTID   V+ RE+V++ L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 72  LFLDTRHRLIDYVEMFHGTIDAAEVHPREVVKQALRLNAAAVIVSHNHPSGNPEPSAADR 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +   L  +++   DH+I+      SF    +I
Sbjct: 132 SMTAQLRQALALVDVRTLDHVIVAGTRTTSFAERGLI 168


>gi|58580118|ref|YP_199134.1| DNA repair protein RadC [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58424712|gb|AAW73749.1| DNA repair protein [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 243

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS AD 
Sbjct: 146 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSKADR 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++ +L  ++I + DH +IG    VS      +
Sbjct: 206 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSLAERGWL 242


>gi|260584697|ref|ZP_05852443.1| DNA repair protein RadC [Granulicatella elegans ATCC 700633]
 gi|260157720|gb|EEW92790.1| DNA repair protein RadC [Granulicatella elegans ATCC 700633]
          Length = 228

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 52/96 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  ++  RG ++   V+ REI +  +  SA  II+ HNHPSGN  PS ADI
Sbjct: 132 LFLNSKNEVIKKKIIFRGGLNQAVVHPREIFREAVRFSAARIIIGHNHPSGNVTPSQADI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           + T+ +      + I + DH I+G   + S K    
Sbjct: 192 DFTRRLSECGEMMGIELLDHFIVGDHTYCSLKEEGY 227


>gi|84622119|ref|YP_449491.1| DNA repair protein RadC [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|123523355|sp|Q2P8B0|Y462_XANOM RecName: Full=UPF0758 protein XOO0462
 gi|84366059|dbj|BAE67217.1| DNA repair protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 225

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++ +L  ++I + DH +IG    VS      +
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSLAERGWL 224


>gi|89098968|ref|ZP_01171848.1| DNA repair protein RadC [Bacillus sp. NRRL B-14911]
 gi|89086372|gb|EAR65493.1| DNA repair protein RadC [Bacillus sp. NRRL B-14911]
          Length = 223

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +    G+++   V+ RE+ +     SA SII +HNHPSG+P PS  DI
Sbjct: 127 LYLNTKNQVLHKQTIFIGSLNASIVHPREVFKEAFRRSAASIICIHNHPSGDPAPSREDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I V DH+IIG++ +VS K    +
Sbjct: 187 EVTKRLAECGKIIGIDVLDHLIIGENKYVSLKEKGYL 223


>gi|157693205|ref|YP_001487667.1| DNA repair protein RadC [Bacillus pumilus SAFR-032]
 gi|157681963|gb|ABV63107.1| DNA repair protein RadC [Bacillus pumilus SAFR-032]
          Length = 232

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++       G+++   V+ REI +   + SA S I VHNHPSG+P PS  DI
Sbjct: 136 LYLNTKNQVLHKHTVFIGSLNSSIVHPREIFKEAFKRSAASFICVHNHPSGDPTPSREDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I + DH++IG   FVS K    +
Sbjct: 196 EVTQRLFECGKLIGIQLLDHLVIGDQKFVSLKEKGYL 232


>gi|194017399|ref|ZP_03056011.1| DNA repair protein RadC [Bacillus pumilus ATCC 7061]
 gi|194011267|gb|EDW20837.1| DNA repair protein RadC [Bacillus pumilus ATCC 7061]
          Length = 232

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++       G+++   V+ REI +   + SA S I VHNHPSG+P PS  DI
Sbjct: 136 LYLNTKNQVLHKHTVFIGSLNSSIVHPREIFKEAFKRSAASFICVHNHPSGDPTPSREDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I + DH++IG   FVS K    +
Sbjct: 196 EVTQRLFECGKLIGIQLLDHLVIGDQKFVSLKEKGYL 232


>gi|301648526|ref|ZP_07248250.1| DNA repair protein RadC domain protein [Escherichia coli MS 146-1]
 gi|301073429|gb|EFK88235.1| DNA repair protein RadC domain protein [Escherichia coli MS 146-1]
          Length = 116

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 20  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 79

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 80  LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 116


>gi|258626046|ref|ZP_05720901.1| Putative radC-like protein [Vibrio mimicus VM603]
 gi|258581666|gb|EEW06560.1| Putative radC-like protein [Vibrio mimicus VM603]
          Length = 157

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157


>gi|170021431|ref|YP_001726385.1| DNA repair protein RadC [Escherichia coli ATCC 8739]
 gi|169756359|gb|ACA79058.1| DNA repair protein RadC [Escherichia coli ATCC 8739]
          Length = 159

 Score =  133 bits (335), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E    GTI+H  V+ RE+V+  L+ +  ++I+ H+HPSG   PS AD 
Sbjct: 63  LFLDNQHRLIAHETLFTGTINHTQVHPREVVKAGLKHNCAAVIVAHSHPSGEAEPSKADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L+ ++I + DH+++G     SF     +
Sbjct: 123 QVTTRIQQALDLVDIRLLDHLVVGGMEITSFADRGWL 159


>gi|331005601|ref|ZP_08328971.1| DNA repair protein RadC [gamma proteobacterium IMCC1989]
 gi|330420574|gb|EGG94870.1| DNA repair protein RadC [gamma proteobacterium IMCC1989]
          Length = 224

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +    GT++   VY REIV+  L  +A ++I  HNHPSG   PS AD 
Sbjct: 128 LFLDSQHQLIRYQEVFFGTVNAANVYPREIVKLALAYNACAVIFAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +   LN +++ V DH+I+G     SF     +
Sbjct: 188 HITQELKDALNLIDVRVLDHLIVGDGDIHSFAENGWL 224


>gi|94499761|ref|ZP_01306297.1| DNA repair protein RadC [Oceanobacter sp. RED65]
 gi|94427962|gb|EAT12936.1| DNA repair protein RadC [Oceanobacter sp. RED65]
          Length = 223

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LIA E   RGTID   VY RE+V++ L  +A ++I  HNHPSG   PSD+DI
Sbjct: 128 LYLDNQHRLIAFEELFRGTIDGASVYPREVVKQVLAHNAAAVIFAHNHPSGIAEPSDSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH ++G    +SF    ++
Sbjct: 188 RITKRLQDALALVDVRVLDHFVVGD-EVISFAQRGML 223


>gi|82779128|ref|YP_405477.1| DNA repair protein RadC [Shigella dysenteriae Sd197]
 gi|81243276|gb|ABB63986.1| DNA repair protein [Shigella dysenteriae Sd197]
          Length = 224

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRIFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224


>gi|323703616|ref|ZP_08115260.1| DNA repair protein RadC [Desulfotomaculum nigrificans DSM 574]
 gi|323531449|gb|EGB21344.1| DNA repair protein RadC [Desulfotomaculum nigrificans DSM 574]
          Length = 227

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +++ E  S GT++   V+ RE+ +  +  SA +IIL HNHPSG+P PS  DI
Sbjct: 131 LLLNTKNRVLSKETISIGTLNSSMVHPRELFKIAIRRSAAAIILAHNHPSGDPTPSREDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     + I V DHIIIG + F S K   +I
Sbjct: 191 MLTKRLIEVGQIIGIDVLDHIIIGDNRFTSLKSKGLI 227


>gi|261867145|ref|YP_003255067.1| DNA repair protein RadC [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412477|gb|ACX81848.1| DNA repair protein RadC [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 219

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A +IIL HNHPSG   PS +D 
Sbjct: 123 LFLDNQHRLIKQERLFLGTINKAMVYPREIIKEALACNAAAIILAHNHPSGVAEPSISDK 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I    + ++I V DH +IG   + SF    ++
Sbjct: 183 QITDTIRQAADLVDIRVLDHFVIGNGRYFSFAEQNLL 219


>gi|254419835|ref|ZP_05033559.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
 gi|196186012|gb|EDX80988.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
          Length = 243

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/97 (57%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LDK N LI DEVQ+RGT+DH PVY RE+V+R LELSA+++ILVHNHPSG+P PS ADI
Sbjct: 147 LYLDKKNQLILDEVQNRGTVDHAPVYPREVVRRALELSASALILVHNHPSGDPTPSRADI 206

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     LN+ VHDH+++G+D   SFK L ++
Sbjct: 207 EITKQVVQAGRALNVEVHDHLVVGRDGVASFKQLGLM 243


>gi|237728935|ref|ZP_04559416.1| DNA repair protein radC [Citrobacter sp. 30_2]
 gi|226909557|gb|EEH95475.1| DNA repair protein radC [Citrobacter sp. 30_2]
          Length = 234

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  + +I       GT+ HV V+ REIV+  ++++A+++IL HNHPSG   PS AD 
Sbjct: 138 IFMDSQHRVIKHSKLFSGTLSHVEVHPREIVREAIKMNASAVILAHNHPSGCAEPSKADK 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     ++I V DH++IG+  +VSF     I
Sbjct: 198 LITERVVKCCQFMDIRVLDHLVIGRGEYVSFAERGWI 234


>gi|237704459|ref|ZP_04534940.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|226900825|gb|EEH87084.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|294491633|gb|ADE90389.1| DNA repair protein, RadC family [Escherichia coli IHE3034]
 gi|307554072|gb|ADN46847.1| DNA repair protein [Escherichia coli ABU 83972]
 gi|323956170|gb|EGB51921.1| DNA repair protein RadC [Escherichia coli H263]
          Length = 158

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++  L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKCALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|89094938|ref|ZP_01167869.1| DNA repair protein RadC [Oceanospirillum sp. MED92]
 gi|89080804|gb|EAR60045.1| DNA repair protein RadC [Oceanospirillum sp. MED92]
          Length = 224

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTI+   VY REIV R L  +A +++L HNHPSG   PSDAD 
Sbjct: 128 LFLDNKHRVIQYENLFWGTINAAAVYPREIVSRALHHNAGAVVLAHNHPSGVAEPSDADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DH+++G     SF    ++
Sbjct: 188 QITLKLQKALALVDVRVIDHMVVGDGEVFSFAEQGVL 224


>gi|83950724|ref|ZP_00959457.1| DNA repair protein RadC [Roseovarius nubinhibens ISM]
 gi|83838623|gb|EAP77919.1| DNA repair protein RadC [Roseovarius nubinhibens ISM]
          Length = 250

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/96 (58%), Positives = 70/96 (72%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FLD  N LIADE Q+RGT+DHVPVY RE+V+R L L+AT++ILVHNHPSG+P PS +DI 
Sbjct: 155 FLDTKNTLIADEDQARGTVDHVPVYPREVVKRALALNATALILVHNHPSGDPTPSQSDIA 214

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           MT  I      L I +HDHIIIGK   +SF+   ++
Sbjct: 215 MTAQIAQAAGSLGITLHDHIIIGKSRELSFRAEGLL 250


>gi|209921109|ref|YP_002295193.1| DNA repair protein RadC [Escherichia coli SE11]
 gi|300815123|ref|ZP_07095348.1| DNA repair protein RadC [Escherichia coli MS 107-1]
 gi|209914368|dbj|BAG79442.1| DNA repair protein [Escherichia coli SE11]
 gi|300532015|gb|EFK53077.1| DNA repair protein RadC [Escherichia coli MS 107-1]
          Length = 224

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224


>gi|22124012|ref|NP_667435.1| DNA repair protein RadC [Yersinia pestis KIM 10]
 gi|45439915|ref|NP_991454.1| DNA repair protein RadC [Yersinia pestis biovar Microtus str.
           91001]
 gi|51594404|ref|YP_068595.1| DNA repair protein RadC [Yersinia pseudotuberculosis IP 32953]
 gi|108809484|ref|YP_653400.1| DNA repair protein RadC [Yersinia pestis Antiqua]
 gi|108813961|ref|YP_649728.1| DNA repair protein RadC [Yersinia pestis Nepal516]
 gi|145601096|ref|YP_001165172.1| DNA repair protein RadC [Yersinia pestis Pestoides F]
 gi|150260887|ref|ZP_01917615.1| putative DNA repair protein [Yersinia pestis CA88-4125]
 gi|153948496|ref|YP_001399062.1| DNA repair protein RadC [Yersinia pseudotuberculosis IP 31758]
 gi|162421088|ref|YP_001604695.1| DNA repair protein RadC [Yersinia pestis Angola]
 gi|165926061|ref|ZP_02221893.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165936188|ref|ZP_02224757.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011487|ref|ZP_02232385.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213687|ref|ZP_02239722.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167402113|ref|ZP_02307590.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167418902|ref|ZP_02310655.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167426676|ref|ZP_02318429.1| DNA repair protein RadC [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|170026362|ref|YP_001722867.1| DNA repair protein RadC [Yersinia pseudotuberculosis YPIII]
 gi|186893392|ref|YP_001870504.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+]
 gi|218927270|ref|YP_002345145.1| DNA repair protein RadC [Yersinia pestis CO92]
 gi|229836162|ref|ZP_04456330.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis Pestoides A]
 gi|229839898|ref|ZP_04460057.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229841980|ref|ZP_04462135.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229904491|ref|ZP_04519602.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis Nepal516]
 gi|270488490|ref|ZP_06205564.1| DNA repair protein RadC [Yersinia pestis KIM D27]
 gi|294502156|ref|YP_003566218.1| DNA repair protein RadC [Yersinia pestis Z176003]
 gi|25009034|sp|Q8ZJP3|Y049_YERPE RecName: Full=UPF0758 protein YPO0049/y0092/YP_0050
 gi|73913745|sp|Q66GD6|Y046_YERPS RecName: Full=UPF0758 protein YPTB0046
 gi|123245478|sp|Q1C267|Y3493_YERPA RecName: Full=UPF0758 protein YPA_3493
 gi|123372833|sp|Q1CD02|Y3801_YERPN RecName: Full=UPF0758 protein YPN_3801
 gi|166218801|sp|A4TSD7|Y3856_YERPP RecName: Full=UPF0758 protein YPDSF_3856
 gi|166918668|sp|A7FCT4|Y061_YERP3 RecName: Full=UPF0758 protein YpsIP31758_0061
 gi|238687317|sp|A9R674|Y055_YERPG RecName: Full=UPF0758 protein YpAngola_A0055
 gi|238688492|sp|B1JQX3|Y4155_YERPY RecName: Full=UPF0758 protein YPK_4155
 gi|238691334|sp|B2JYN3|Y048_YERPB RecName: Full=UPF0758 protein YPTS_0048
 gi|21956754|gb|AAM83686.1|AE013609_11 DNA repair protein [Yersinia pestis KIM 10]
 gi|45434770|gb|AAS60331.1| putative DNA repair protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51587686|emb|CAH19286.1| putative DNA repair protein [Yersinia pseudotuberculosis IP 32953]
 gi|108777609|gb|ABG20128.1| DNA repair protein [Yersinia pestis Nepal516]
 gi|108781397|gb|ABG15455.1| putative DNA repair protein [Yersinia pestis Antiqua]
 gi|115345881|emb|CAL18739.1| putative DNA repair protein [Yersinia pestis CO92]
 gi|145212792|gb|ABP42199.1| DNA repair protein [Yersinia pestis Pestoides F]
 gi|149290295|gb|EDM40372.1| putative DNA repair protein [Yersinia pestis CA88-4125]
 gi|152959991|gb|ABS47452.1| DNA repair protein RadC [Yersinia pseudotuberculosis IP 31758]
 gi|162353903|gb|ABX87851.1| DNA repair protein RadC [Yersinia pestis Angola]
 gi|165915802|gb|EDR34410.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165921921|gb|EDR39098.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989633|gb|EDR41934.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205089|gb|EDR49569.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962896|gb|EDR58917.1| DNA repair protein RadC [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048488|gb|EDR59896.1| DNA repair protein RadC [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167054365|gb|EDR64182.1| DNA repair protein RadC [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169752896|gb|ACA70414.1| DNA repair protein RadC [Yersinia pseudotuberculosis YPIII]
 gi|186696418|gb|ACC87047.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+]
 gi|229678609|gb|EEO74714.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis Nepal516]
 gi|229690290|gb|EEO82344.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229696264|gb|EEO86311.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229706610|gb|EEO92616.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis Pestoides A]
 gi|262360235|gb|ACY56956.1| DNA repair protein RadC [Yersinia pestis D106004]
 gi|262364182|gb|ACY60739.1| DNA repair protein RadC [Yersinia pestis D182038]
 gi|270336994|gb|EFA47771.1| DNA repair protein RadC [Yersinia pestis KIM D27]
 gi|294352615|gb|ADE62956.1| DNA repair protein RadC [Yersinia pestis Z176003]
 gi|320013403|gb|ADV96974.1| protein associated with replication fork, possible DNA repair
           protein [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 222

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 126 VFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +I   + L+I V DH+++G+   VSF     +
Sbjct: 186 LITTQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 222


>gi|289671096|ref|ZP_06492171.1| DNA repair protein RadC [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 225

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++ +L  ++I + DH +IG    VS      +
Sbjct: 188 AVTKRLLESLELVDIRLLDHFVIGDGRPVSLAERGWL 224


>gi|52081286|ref|YP_080077.1| DNA repair protein RadC [Bacillus licheniformis ATCC 14580]
 gi|52786665|ref|YP_092494.1| DNA repair protein RadC [Bacillus licheniformis ATCC 14580]
 gi|81690952|sp|Q65GL3|Y2933_BACLD RecName: Full=UPF0758 protein BLi02933/BL00636
 gi|52004497|gb|AAU24439.1| DNA repair protein [Bacillus licheniformis ATCC 14580]
 gi|52349167|gb|AAU41801.1| RadC [Bacillus licheniformis ATCC 14580]
          Length = 224

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I       G+++   V+ RE+ +  L+ SA S I VHNHPSG+P PS  DI
Sbjct: 128 VYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEALKRSAASFICVHNHPSGDPAPSREDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +  +   L I + DHIIIG   FVS K    +
Sbjct: 188 EVTQRLHESGQLLGIELLDHIIIGDQKFVSLKEKGYL 224


>gi|330909700|gb|EGH38214.1| DNA repair protein RadC [Escherichia coli AA86]
          Length = 226

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 130 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 190 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 226


>gi|212712581|ref|ZP_03320709.1| hypothetical protein PROVALCAL_03676 [Providencia alcalifaciens DSM
           30120]
 gi|212684797|gb|EEB44325.1| hypothetical protein PROVALCAL_03676 [Providencia alcalifaciens DSM
           30120]
          Length = 221

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + +I  E   +GTI+ V V+ REI++  + ++A++I+L HNHPSGNP PS AD 
Sbjct: 125 LFLNNQHQVICHEEMFKGTINRVEVHPREILRFAMRMNASAIVLAHNHPSGNPEPSMADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I    + + I + DH ++G  + +SF     +
Sbjct: 185 YVTEQIQGACDVMGIKLLDHFVVGHKSCISFAERGWL 221


>gi|194431265|ref|ZP_03063558.1| DNA repair protein RadC [Shigella dysenteriae 1012]
 gi|194420720|gb|EDX36796.1| DNA repair protein RadC [Shigella dysenteriae 1012]
 gi|332084498|gb|EGI89693.1| DNA repair protein radC [Shigella dysenteriae 155-74]
          Length = 222

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|82546001|ref|YP_409948.1| DNA repair protein RadC [Shigella boydii Sb227]
 gi|293463962|ref|ZP_06664376.1| DNA repair protein RadC [Escherichia coli B088]
 gi|300822408|ref|ZP_07102548.1| DNA repair protein RadC [Escherichia coli MS 119-7]
 gi|301325320|ref|ZP_07218827.1| DNA repair protein RadC [Escherichia coli MS 78-1]
 gi|301644304|ref|ZP_07244306.1| DNA repair protein RadC [Escherichia coli MS 146-1]
 gi|331644356|ref|ZP_08345485.1| DNA repair protein RadC [Escherichia coli H736]
 gi|331655270|ref|ZP_08356269.1| DNA repair protein RadC [Escherichia coli M718]
 gi|331675118|ref|ZP_08375875.1| DNA repair protein RadC [Escherichia coli TA280]
 gi|331679729|ref|ZP_08380399.1| DNA repair protein RadC [Escherichia coli H591]
 gi|81247412|gb|ABB68120.1| DNA repair protein [Shigella boydii Sb227]
 gi|291321594|gb|EFE61030.1| DNA repair protein RadC [Escherichia coli B088]
 gi|300525055|gb|EFK46124.1| DNA repair protein RadC [Escherichia coli MS 119-7]
 gi|300847847|gb|EFK75607.1| DNA repair protein RadC [Escherichia coli MS 78-1]
 gi|301077342|gb|EFK92148.1| DNA repair protein RadC [Escherichia coli MS 146-1]
 gi|315618659|gb|EFU99245.1| DNA repair protein radC [Escherichia coli 3431]
 gi|323160754|gb|EFZ46690.1| DNA repair protein radC [Escherichia coli E128010]
 gi|331036650|gb|EGI08876.1| DNA repair protein RadC [Escherichia coli H736]
 gi|331047285|gb|EGI19363.1| DNA repair protein RadC [Escherichia coli M718]
 gi|331068027|gb|EGI39425.1| DNA repair protein RadC [Escherichia coli TA280]
 gi|331072901|gb|EGI44226.1| DNA repair protein RadC [Escherichia coli H591]
 gi|332089352|gb|EGI94456.1| DNA repair protein radC [Shigella boydii 3594-74]
 gi|332104944|gb|EGJ08290.1| DNA repair protein RadC [Shigella sp. D9]
          Length = 224

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224


>gi|159046109|ref|YP_001534903.1| DNA repair protein RadC [Dinoroseobacter shibae DFL 12]
 gi|157913869|gb|ABV95302.1| DNA repair protein RadC [Dinoroseobacter shibae DFL 12]
          Length = 254

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/97 (55%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N+LIADE Q+RGT+DHVPVY REI +R LEL+A+++ILVHNHPSG+P PS+ DI
Sbjct: 158 LYLDNKNVLIADEAQARGTVDHVPVYPREIAKRALELNASALILVHNHPSGDPTPSEQDI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      L + +HDH++IGK   VSF+    +
Sbjct: 218 TMTYAIRDAAEVLGLRLHDHLVIGKSREVSFRAEGYL 254


>gi|332084818|gb|EGI90001.1| DNA repair protein radC [Shigella boydii 5216-82]
          Length = 188

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 92  IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 151

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 152 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 188


>gi|323944091|gb|EGB40171.1| DNA repair protein RadC [Escherichia coli H120]
          Length = 222

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|15804179|ref|NP_290218.1| DNA repair protein RadC [Escherichia coli O157:H7 EDL933]
 gi|15833767|ref|NP_312540.1| DNA repair protein RadC [Escherichia coli O157:H7 str. Sakai]
 gi|26250284|ref|NP_756324.1| DNA repair protein RadC [Escherichia coli CFT073]
 gi|91213155|ref|YP_543141.1| DNA repair protein RadC [Escherichia coli UTI89]
 gi|117625910|ref|YP_859233.1| DNA repair protein RadC [Escherichia coli APEC O1]
 gi|161485825|ref|NP_709417.3| DNA repair protein RadC [Shigella flexneri 2a str. 301]
 gi|161486390|ref|NP_839257.2| DNA repair protein RadC [Shigella flexneri 2a str. 2457T]
 gi|227883806|ref|ZP_04001611.1| DNA repair protein RadC [Escherichia coli 83972]
 gi|237703409|ref|ZP_04533890.1| DNA repair protein radC [Escherichia sp. 3_2_53FAA]
 gi|254038838|ref|ZP_04872890.1| DNA repair protein radC [Escherichia sp. 1_1_43]
 gi|291285009|ref|YP_003501827.1| DNA repair protein [Escherichia coli O55:H7 str. CB9615]
 gi|300898572|ref|ZP_07116903.1| DNA repair protein RadC [Escherichia coli MS 198-1]
 gi|300907679|ref|ZP_07125307.1| DNA repair protein RadC [Escherichia coli MS 84-1]
 gi|300939237|ref|ZP_07153917.1| DNA repair protein RadC [Escherichia coli MS 21-1]
 gi|300983482|ref|ZP_07176629.1| DNA repair protein RadC [Escherichia coli MS 200-1]
 gi|300984962|ref|ZP_07177214.1| DNA repair protein RadC [Escherichia coli MS 45-1]
 gi|301018967|ref|ZP_07183190.1| DNA repair protein RadC [Escherichia coli MS 69-1]
 gi|301047427|ref|ZP_07194507.1| DNA repair protein RadC [Escherichia coli MS 185-1]
 gi|301303871|ref|ZP_07209990.1| DNA repair protein RadC [Escherichia coli MS 124-1]
 gi|309797621|ref|ZP_07692009.1| DNA repair protein RadC [Escherichia coli MS 145-7]
 gi|312972077|ref|ZP_07786251.1| DNA repair protein radC [Escherichia coli 1827-70]
 gi|331649453|ref|ZP_08350539.1| DNA repair protein RadC [Escherichia coli M605]
 gi|12518394|gb|AAG58782.1|AE005591_6 DNA repair protein [Escherichia coli O157:H7 str. EDL933]
 gi|26110714|gb|AAN82898.1|AE016769_13 DNA repair protein radC [Escherichia coli CFT073]
 gi|13363988|dbj|BAB37936.1| DNA repair protein [Escherichia coli O157:H7 str. Sakai]
 gi|91074729|gb|ABE09610.1| DNA repair protein [Escherichia coli UTI89]
 gi|115515034|gb|ABJ03109.1| DNA repair protein RadC [Escherichia coli APEC O1]
 gi|209754638|gb|ACI75631.1| DNA repair protein [Escherichia coli]
 gi|209754640|gb|ACI75632.1| DNA repair protein [Escherichia coli]
 gi|209754642|gb|ACI75633.1| DNA repair protein [Escherichia coli]
 gi|209754644|gb|ACI75634.1| DNA repair protein [Escherichia coli]
 gi|209754646|gb|ACI75635.1| DNA repair protein [Escherichia coli]
 gi|226838803|gb|EEH70830.1| DNA repair protein radC [Escherichia sp. 1_1_43]
 gi|226902673|gb|EEH88932.1| DNA repair protein radC [Escherichia sp. 3_2_53FAA]
 gi|227839084|gb|EEJ49550.1| DNA repair protein RadC [Escherichia coli 83972]
 gi|281603001|gb|ADA75985.1| DNA repair protein [Shigella flexneri 2002017]
 gi|290764882|gb|ADD58843.1| DNA repair protein [Escherichia coli O55:H7 str. CB9615]
 gi|300300701|gb|EFJ57086.1| DNA repair protein RadC [Escherichia coli MS 185-1]
 gi|300306946|gb|EFJ61466.1| DNA repair protein RadC [Escherichia coli MS 200-1]
 gi|300357758|gb|EFJ73628.1| DNA repair protein RadC [Escherichia coli MS 198-1]
 gi|300399461|gb|EFJ82999.1| DNA repair protein RadC [Escherichia coli MS 69-1]
 gi|300400615|gb|EFJ84153.1| DNA repair protein RadC [Escherichia coli MS 84-1]
 gi|300408242|gb|EFJ91780.1| DNA repair protein RadC [Escherichia coli MS 45-1]
 gi|300455879|gb|EFK19372.1| DNA repair protein RadC [Escherichia coli MS 21-1]
 gi|300840834|gb|EFK68594.1| DNA repair protein RadC [Escherichia coli MS 124-1]
 gi|308118808|gb|EFO56070.1| DNA repair protein RadC [Escherichia coli MS 145-7]
 gi|310334454|gb|EFQ00659.1| DNA repair protein radC [Escherichia coli 1827-70]
 gi|315254024|gb|EFU33992.1| DNA repair protein RadC [Escherichia coli MS 85-1]
 gi|315285375|gb|EFU44820.1| DNA repair protein RadC [Escherichia coli MS 110-3]
 gi|315292975|gb|EFU52327.1| DNA repair protein RadC [Escherichia coli MS 153-1]
 gi|323189454|gb|EFZ74735.1| DNA repair protein radC [Escherichia coli RN587/1]
 gi|324008143|gb|EGB77362.1| DNA repair protein RadC [Escherichia coli MS 57-2]
 gi|324012728|gb|EGB81947.1| DNA repair protein RadC [Escherichia coli MS 60-1]
 gi|325499444|gb|EGC97303.1| DNA repair protein RadC [Escherichia fergusonii ECD227]
 gi|331041951|gb|EGI14095.1| DNA repair protein RadC [Escherichia coli M605]
          Length = 224

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224


>gi|309784385|ref|ZP_07679024.1| DNA repair protein radC [Shigella dysenteriae 1617]
 gi|172046622|sp|Q329L9|YICR_SHIDS RecName: Full=UPF0758 protein yicR
 gi|308927892|gb|EFP73360.1| DNA repair protein radC [Shigella dysenteriae 1617]
          Length = 222

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRIFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|262191975|ref|ZP_06050141.1| DNA repair protein RadC [Vibrio cholerae CT 5369-93]
 gi|262032150|gb|EEY50722.1| DNA repair protein RadC [Vibrio cholerae CT 5369-93]
 gi|315178489|gb|ADT85403.1| DNA repair protein RadC-related protein [Vibrio furnissii NCTC
           11218]
          Length = 157

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157


>gi|315645752|ref|ZP_07898876.1| DNA repair protein RadC [Paenibacillus vortex V453]
 gi|315279230|gb|EFU42540.1| DNA repair protein RadC [Paenibacillus vortex V453]
          Length = 229

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +IA E  S G+++   V+ RE+ +  ++ S+ S++  HNHPSG+P PS  DI
Sbjct: 133 VFLNTKNHVIAQETLSMGSLNASIVHPREVFRAAIKCSSASLVCAHNHPSGDPTPSPEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  ++     + I V DH+IIG  +FVS K   ++
Sbjct: 193 SLTTRLVEAGQIVGIEVLDHLIIGDGSFVSLKERGLM 229


>gi|295688455|ref|YP_003592148.1| DNA repair protein RadC [Caulobacter segnis ATCC 21756]
 gi|295430358|gb|ADG09530.1| DNA repair protein RadC [Caulobacter segnis ATCC 21756]
          Length = 256

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEV +RGT+DH PVY RE+++R LELS+++II+VHNHPSG+P PS  DI
Sbjct: 160 LFLDKKNQLIADEVMNRGTVDHAPVYPREVMRRALELSSSNIIIVHNHPSGDPTPSRPDI 219

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ I+     L I VHDH+++G++   SFK L ++
Sbjct: 220 DMTKQIVEAGKALKIAVHDHLVVGREGVASFKALGLM 256


>gi|209549111|ref|YP_002281028.1| DNA repair protein RadC [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226736629|sp|B5ZMI0|Y1511_RHILW RecName: Full=UPF0758 protein Rleg2_1511
 gi|209534867|gb|ACI54802.1| DNA repair protein RadC [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 275

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 67/97 (69%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 179 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAMILVHNHPSGDPTPSRADI 238

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II     L+I VHDH+IIGKD  VS KGL++I
Sbjct: 239 DMTKVIIEAAKALDITVHDHVIIGKDGHVSLKGLKLI 275


>gi|25014079|sp|Q9PGZ8|Y148_XYLFA RecName: Full=UPF0758 protein XF_0148
          Length = 224

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  I+ E    GTI+   V+ RE+V+R L L+A ++I+ HNHPSGN  PS AD 
Sbjct: 128 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ +++ + DH +IG  A VSF     +
Sbjct: 188 MITQRLKNALDLIDVRLVDHFVIGDGAPVSFAEHGWL 224


>gi|120597983|ref|YP_962557.1| DNA repair protein RadC [Shewanella sp. W3-18-1]
 gi|120558076|gb|ABM24003.1| DNA repair protein RadC [Shewanella sp. W3-18-1]
          Length = 165

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   +GT+D   VY RE+ +R LEL+  ++ILVHNHPSG+P PS++D 
Sbjct: 69  LFLDTKHRVIRFEELFKGTLDAASVYPREVTKRALELNVAAVILVHNHPSGDPEPSESDK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L+ ++I   DH+++  +  VS      +
Sbjct: 129 RITHRLRDALSLVDIRTLDHVVVASEGCVSLAERGYL 165


>gi|302384219|ref|YP_003820042.1| DNA repair protein RadC [Brevundimonas subvibrioides ATCC 15264]
 gi|302194847|gb|ADL02419.1| DNA repair protein RadC [Brevundimonas subvibrioides ATCC 15264]
          Length = 249

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/97 (59%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI DEVQ+RGT+DH PVY RE+V+R LE++A ++ILVHNHPSG+P PS ADI
Sbjct: 153 LYLDNRNQLILDEVQNRGTVDHAPVYPREVVRRGLEVNAKAMILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MTQ II    PLN+ VHDH+I+G++   SFK L ++
Sbjct: 213 DMTQQIIRAARPLNVEVHDHLIVGREGVTSFKQLGLM 249


>gi|299531454|ref|ZP_07044862.1| DNA repair protein RadC [Comamonas testosteroni S44]
 gi|298720617|gb|EFI61566.1| DNA repair protein RadC [Comamonas testosteroni S44]
          Length = 230

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V R L   A ++IL HNHPSG+  PS AD 
Sbjct: 134 LFLDSQNRLLALEEMFRGTLTQTSVYPREVVLRALHHQAGAVILAHNHPSGSVQPSSADR 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +   L  +++ V DHII+G  A  S     ++
Sbjct: 194 SLTNTLKAALALIDVRVLDHIIVGPGAACSMAEEGLL 230


>gi|293413072|ref|ZP_06655740.1| radC [Escherichia coli B354]
 gi|291468719|gb|EFF11212.1| radC [Escherichia coli B354]
          Length = 224

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224


>gi|146309768|ref|YP_001174842.1| DNA repair protein RadC [Enterobacter sp. 638]
 gi|166918667|sp|A4W511|Y101_ENT38 RecName: Full=UPF0758 protein Ent638_0101
 gi|145316644|gb|ABP58791.1| DNA replication and repair protein RadC [Enterobacter sp. 638]
          Length = 221

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT+ HV V+ REIV+  ++++A ++IL HNHPSG   PS AD 
Sbjct: 125 IFLDNQHRVVKHSRMFSGTLRHVEVHPREIVREAIKVNAAAVILAHNHPSGCAEPSKADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ II     ++I V DH IIG+  +VSF     I
Sbjct: 185 DITERIIKCCQFMDIHVLDHFIIGRGEYVSFAEQGWI 221


>gi|157163119|ref|YP_001460437.1| DNA repair protein RadC [Escherichia coli HS]
 gi|166918666|sp|A8A6A0|YICR_ECOHS RecName: Full=UPF0758 protein yicR
 gi|157068799|gb|ABV08054.1| DNA repair protein RadC [Escherichia coli HS]
          Length = 222

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|50119543|ref|YP_048710.1| putative DNA repair protein [Pectobacterium atrosepticum SCRI1043]
 gi|49610069|emb|CAG73509.1| putative DNA repair protein [Pectobacterium atrosepticum SCRI1043]
          Length = 137

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N LIA E    GTI+ V V+  E+V+R + L+A ++I  HNHPSGN  PS+AD 
Sbjct: 41  MFLNNQNRLIACEFLFAGTINSVEVHPHEVVRRAVLLNAAAVIFAHNHPSGNAEPSNADR 100

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L+ + + V DHII+G    VSF     +
Sbjct: 101 QITEKLTNALSLIEVRVLDHIIVGHGEIVSFAERGWL 137


>gi|259417142|ref|ZP_05741061.1| DNA repair protein RadC [Silicibacter sp. TrichCH4B]
 gi|259346048|gb|EEW57862.1| DNA repair protein RadC [Silicibacter sp. TrichCH4B]
          Length = 271

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/97 (54%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LIADE Q RGT+DHVPVY RE+ +R LEL+++++ILVHNHPSG+P PS ADI
Sbjct: 175 LYLDRKNVLIADEEQGRGTVDHVPVYPREVAKRALELNSSALILVHNHPSGDPTPSQADI 234

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +   L+ L I +HDH+IIG    +SF+   ++
Sbjct: 235 AMTRKVEAALDALGITLHDHLIIGASDELSFRSEGLL 271


>gi|193063880|ref|ZP_03044967.1| DNA repair protein RadC [Escherichia coli E22]
 gi|218697359|ref|YP_002405026.1| DNA repair protein RadC [Escherichia coli 55989]
 gi|256021358|ref|ZP_05435223.1| DNA repair protein RadC [Shigella sp. D9]
 gi|256025632|ref|ZP_05439497.1| DNA repair protein RadC [Escherichia sp. 4_1_40B]
 gi|260846597|ref|YP_003224375.1| protein associated with replication fork [Escherichia coli O103:H2
           str. 12009]
 gi|307140336|ref|ZP_07499692.1| DNA repair protein RadC [Escherichia coli H736]
 gi|172046624|sp|Q31UY8|YICR_SHIBS RecName: Full=UPF0758 protein yicR
 gi|254789650|sp|B7L757|YICR_ECO55 RecName: Full=UPF0758 protein yicR
 gi|192930595|gb|EDV83202.1| DNA repair protein RadC [Escherichia coli E22]
 gi|218354091|emb|CAV00643.1| protein associated with replication fork, putative DNA repair
           protein [Escherichia coli 55989]
 gi|257761744|dbj|BAI33241.1| protein associated with replication fork [Escherichia coli O103:H2
           str. 12009]
 gi|320176303|gb|EFW51363.1| DNA repair protein RadC [Shigella dysenteriae CDC 74-1112]
 gi|320186822|gb|EFW61542.1| DNA repair protein RadC [Shigella flexneri CDC 796-83]
 gi|323182666|gb|EFZ68069.1| DNA repair protein radC [Escherichia coli 1357]
 gi|323934817|gb|EGB31199.1| DNA repair protein RadC [Escherichia coli E1520]
 gi|324116023|gb|EGC09949.1| DNA repair protein RadC [Escherichia coli E1167]
          Length = 222

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|323179392|gb|EFZ64959.1| DNA repair protein radC [Escherichia coli 1180]
          Length = 224

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224


>gi|300919795|ref|ZP_07136270.1| DNA repair protein RadC [Escherichia coli MS 115-1]
 gi|300413148|gb|EFJ96458.1| DNA repair protein RadC [Escherichia coli MS 115-1]
          Length = 224

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224


>gi|161505736|ref|YP_001572848.1| DNA repair protein RadC [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189029401|sp|A9MKN7|YICR_SALAR RecName: Full=UPF0758 protein yicR
 gi|160867083|gb|ABX23706.1| hypothetical protein SARI_03912 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 221

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT+ HV V+ REIV+  ++L+A+++IL HNHPSG   PS AD 
Sbjct: 125 IFLDAQHRVLQHSRLFSGTLSHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +I     ++I V DH+IIG+  +VSF     I
Sbjct: 185 HITDRVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221


>gi|3024521|sp|P72255|Y2304_RHOCA RecName: Full=UPF0758 protein
 gi|1658114|gb|AAB18255.1| RadC [Rhodobacter capsulatus]
          Length = 214

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL A+++ILVHNHPSG+P PS ADI
Sbjct: 118 LFLDRKNLLIADEEQARGTVDHVPVYPREVVKRALELDASALILVHNHPSGDPTPSQADI 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      L +++HDH++IGK   +SF+   ++
Sbjct: 178 AMTDQIRHAAEALGLVLHDHLVIGKGRELSFRAEGLL 214


>gi|260429142|ref|ZP_05783119.1| DNA repair protein RadC [Citreicella sp. SE45]
 gi|260419765|gb|EEX13018.1| DNA repair protein RadC [Citreicella sp. SE45]
          Length = 254

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/97 (57%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE+Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 158 LFLDRKNVLIADELQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSQADI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  I    + L I +HDH++IGK   +SF+   ++
Sbjct: 218 DMTAQIQVAADALGITLHDHLVIGKSRELSFRSAGLL 254


>gi|255292016|dbj|BAH90499.1| DNA repair protein RadC [uncultured bacterium]
 gi|255292877|dbj|BAH89977.1| DNA repair protein RadC [uncultured bacterium]
 gi|255292945|dbj|BAH90043.1| DNA repair protein RadC [uncultured bacterium]
 gi|255293215|dbj|BAH90305.1| DNA repair protein RadC [uncultured bacterium]
          Length = 169

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D  + LI      RGTID   VY RE+V+  L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 73  LFMDTQHRLIEYAEMFRGTIDSASVYPRELVKEALRLNAAAVIISHNHPSGNPEPSQADK 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++   DHII+      SF    +I
Sbjct: 133 VLTRQLKEVLALVDVRTLDHIIVAGTTTTSFAERGLI 169


>gi|193070384|ref|ZP_03051326.1| DNA repair protein RadC [Escherichia coli E110019]
 gi|192956323|gb|EDV86784.1| DNA repair protein RadC [Escherichia coli E110019]
          Length = 222

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|315297033|gb|EFU56313.1| DNA repair protein RadC [Escherichia coli MS 16-3]
          Length = 224

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224


>gi|282600469|ref|ZP_05974415.2| DNA repair protein RadC [Providencia rustigianii DSM 4541]
 gi|282565170|gb|EFB70705.1| DNA repair protein RadC [Providencia rustigianii DSM 4541]
          Length = 234

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +I  E   +GT++ V V+ REI++  ++++A+SIIL HNHPSGNP PS AD 
Sbjct: 138 IFLNNQNQIICHEEMFKGTVNRVEVHPREILRFAMKMNASSIILAHNHPSGNPEPSIADK 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I +  + + I + DH ++G    VSF     +
Sbjct: 198 QVTERIHSACSIMGIKLLDHFVVGHKHCVSFVERGWL 234


>gi|157155076|ref|YP_001465118.1| DNA repair protein RadC [Escherichia coli E24377A]
 gi|168748714|ref|ZP_02773736.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4113]
 gi|168753462|ref|ZP_02778469.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4401]
 gi|168759735|ref|ZP_02784742.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4501]
 gi|168766058|ref|ZP_02791065.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4486]
 gi|168772396|ref|ZP_02797403.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4196]
 gi|168779793|ref|ZP_02804800.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4076]
 gi|168785514|ref|ZP_02810521.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC869]
 gi|168798583|ref|ZP_02823590.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC508]
 gi|170682096|ref|YP_001745938.1| DNA repair protein RadC [Escherichia coli SMS-3-5]
 gi|191167799|ref|ZP_03029605.1| DNA repair protein RadC [Escherichia coli B7A]
 gi|191170534|ref|ZP_03032087.1| DNA repair protein RadC [Escherichia coli F11]
 gi|194435617|ref|ZP_03067720.1| DNA repair protein RadC [Escherichia coli 101-1]
 gi|195936199|ref|ZP_03081581.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4024]
 gi|208807607|ref|ZP_03249944.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4206]
 gi|208814077|ref|ZP_03255406.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4045]
 gi|208819041|ref|ZP_03259361.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4042]
 gi|209399382|ref|YP_002273116.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4115]
 gi|215488917|ref|YP_002331348.1| DNA repair protein RadC [Escherichia coli O127:H6 str. E2348/69]
 gi|217325841|ref|ZP_03441925.1| DNA repair protein RadC [Escherichia coli O157:H7 str. TW14588]
 gi|218551166|ref|YP_002384957.1| DNA repair protein RadC [Escherichia fergusonii ATCC 35469]
 gi|218556201|ref|YP_002389114.1| DNA repair protein RadC [Escherichia coli IAI1]
 gi|218560710|ref|YP_002393623.1| DNA repair protein RadC [Escherichia coli S88]
 gi|218702404|ref|YP_002410033.1| DNA repair protein RadC [Escherichia coli IAI39]
 gi|218707272|ref|YP_002414791.1| DNA repair protein RadC [Escherichia coli UMN026]
 gi|254795593|ref|YP_003080430.1| DNA repair protein RadC [Escherichia coli O157:H7 str. TW14359]
 gi|260857967|ref|YP_003231858.1| protein associated with replication fork [Escherichia coli O26:H11
           str. 11368]
 gi|261224179|ref|ZP_05938460.1| DNA repair protein RadC [Escherichia coli O157:H7 str. FRIK2000]
 gi|261254790|ref|ZP_05947323.1| DNA repair protein RadC [Escherichia coli O157:H7 str. FRIK966]
 gi|293407261|ref|ZP_06651185.1| radC [Escherichia coli FVEC1412]
 gi|298383007|ref|ZP_06992602.1| DNA repair protein RadC [Escherichia coli FVEC1302]
 gi|306816014|ref|ZP_07450152.1| DNA repair protein RadC [Escherichia coli NC101]
 gi|307314277|ref|ZP_07593885.1| DNA repair protein RadC [Escherichia coli W]
 gi|312968021|ref|ZP_07782232.1| DNA repair protein radC [Escherichia coli 2362-75]
 gi|331659958|ref|ZP_08360896.1| DNA repair protein RadC [Escherichia coli TA206]
 gi|331665263|ref|ZP_08366164.1| DNA repair protein RadC [Escherichia coli TA143]
 gi|54039001|sp|P65958|YICR_ECO57 RecName: Full=UPF0758 protein yicR
 gi|54039002|sp|P65959|YICR_SHIFL RecName: Full=UPF0758 protein yicR
 gi|54041783|sp|P65957|YICR_ECOL6 RecName: Full=UPF0758 protein yicR
 gi|166918665|sp|A7ZTI9|YICR_ECO24 RecName: Full=UPF0758 protein yicR
 gi|171704420|sp|A1AHG9|YICR_ECOK1 RecName: Full=UPF0758 protein yicR
 gi|172045688|sp|Q0SYG5|YICR_SHIF8 RecName: Full=UPF0758 protein yicR
 gi|172045855|sp|Q0TBH1|YICR_ECOL5 RecName: Full=UPF0758 protein yicR
 gi|172046244|sp|Q1R4V4|YICR_ECOUT RecName: Full=UPF0758 protein yicR
 gi|226736620|sp|B7MFJ9|YICR_ECO45 RecName: Full=UPF0758 protein yicR
 gi|226736621|sp|B7NPZ9|YICR_ECO7I RecName: Full=UPF0758 protein yicR
 gi|226736622|sp|B7M4C3|YICR_ECO8A RecName: Full=UPF0758 protein yicR
 gi|226736623|sp|B7NEU2|YICR_ECOLU RecName: Full=UPF0758 protein yicR
 gi|226736624|sp|B1LK75|YICR_ECOSM RecName: Full=UPF0758 protein yicR
 gi|226736625|sp|B7LVJ9|YICR_ESCF3 RecName: Full=UPF0758 protein yicR
 gi|238054488|sp|B5YWD6|YICR_ECO5E RecName: Full=UPF0758 protein yicR
 gi|254789649|sp|B7ULJ3|YICR_ECO27 RecName: Full=UPF0758 protein yicR
 gi|30043347|gb|AAP19068.1| DNA repair protein [Shigella flexneri 2a str. 2457T]
 gi|56383942|gb|AAN45124.2| DNA repair protein [Shigella flexneri 2a str. 301]
 gi|157077106|gb|ABV16814.1| DNA repair protein RadC [Escherichia coli E24377A]
 gi|170519814|gb|ACB17992.1| DNA repair protein RadC [Escherichia coli SMS-3-5]
 gi|187771513|gb|EDU35357.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4196]
 gi|188016882|gb|EDU55004.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4113]
 gi|189002388|gb|EDU71374.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4076]
 gi|189359101|gb|EDU77520.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4401]
 gi|189364789|gb|EDU83208.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4486]
 gi|189369603|gb|EDU88019.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4501]
 gi|189374591|gb|EDU93007.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC869]
 gi|189378726|gb|EDU97142.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC508]
 gi|190902142|gb|EDV61885.1| DNA repair protein RadC [Escherichia coli B7A]
 gi|190909342|gb|EDV68928.1| DNA repair protein RadC [Escherichia coli F11]
 gi|194425160|gb|EDX41144.1| DNA repair protein RadC [Escherichia coli 101-1]
 gi|208727408|gb|EDZ77009.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4206]
 gi|208735354|gb|EDZ84041.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4045]
 gi|208739164|gb|EDZ86846.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4042]
 gi|209160782|gb|ACI38215.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC4115]
 gi|215266989|emb|CAS11434.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli O127:H6 str. E2348/69]
 gi|217322062|gb|EEC30486.1| DNA repair protein RadC [Escherichia coli O157:H7 str. TW14588]
 gi|218358707|emb|CAQ91363.1| protein associated with replication fork, putative DNA repair
           protein [Escherichia fergusonii ATCC 35469]
 gi|218362969|emb|CAR00606.1| protein associated with replication fork, putative DNA repair
           protein [Escherichia coli IAI1]
 gi|218367479|emb|CAR05261.1| protein associated with replication fork, putative DNA repair
           protein [Escherichia coli S88]
 gi|218372390|emb|CAR20264.1| protein associated with replication fork, putative DNA repair
           protein [Escherichia coli IAI39]
 gi|218434369|emb|CAR15294.1| protein associated with replication fork, putative DNA repair
           protein [Escherichia coli UMN026]
 gi|254594993|gb|ACT74354.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|257756616|dbj|BAI28118.1| protein associated with replication fork [Escherichia coli O26:H11
           str. 11368]
 gi|284923671|emb|CBG36768.1| DNA repair protein [Escherichia coli 042]
 gi|291426072|gb|EFE99106.1| radC [Escherichia coli FVEC1412]
 gi|294489934|gb|ADE88690.1| DNA repair protein RadC [Escherichia coli IHE3034]
 gi|298276843|gb|EFI18361.1| DNA repair protein RadC [Escherichia coli FVEC1302]
 gi|305850410|gb|EFM50867.1| DNA repair protein RadC [Escherichia coli NC101]
 gi|306906100|gb|EFN36619.1| DNA repair protein RadC [Escherichia coli W]
 gi|307628711|gb|ADN73015.1| DNA repair protein RadC [Escherichia coli UM146]
 gi|309704040|emb|CBJ03386.1| DNA repair protein [Escherichia coli ETEC H10407]
 gi|312287280|gb|EFR15189.1| DNA repair protein radC [Escherichia coli 2362-75]
 gi|313647488|gb|EFS11938.1| DNA repair protein radC [Shigella flexneri 2a str. 2457T]
 gi|315062926|gb|ADT77253.1| protein associated with replication fork, possible DNA repair
           protein [Escherichia coli W]
 gi|320191311|gb|EFW65961.1| DNA repair protein RadC [Escherichia coli O157:H7 str. EC1212]
 gi|320193855|gb|EFW68488.1| DNA repair protein RadC [Escherichia coli WV_060327]
 gi|320201337|gb|EFW75918.1| DNA repair protein RadC [Escherichia coli EC4100B]
 gi|320639545|gb|EFX09153.1| hypothetical protein ECO5101_20865 [Escherichia coli O157:H7 str.
           G5101]
 gi|320644984|gb|EFX14014.1| hypothetical protein ECO9389_10227 [Escherichia coli O157:H- str.
           493-89]
 gi|320650251|gb|EFX18740.1| hypothetical protein ECO2687_12698 [Escherichia coli O157:H- str. H
           2687]
 gi|320655603|gb|EFX23531.1| hypothetical protein ECO7815_06054 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661337|gb|EFX28761.1| hypothetical protein ECO5905_11396 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|323155289|gb|EFZ41472.1| DNA repair protein radC [Escherichia coli EPECa14]
 gi|323376481|gb|ADX48749.1| DNA repair protein RadC [Escherichia coli KO11]
 gi|323939603|gb|EGB35809.1| DNA repair protein RadC [Escherichia coli E482]
 gi|323949877|gb|EGB45761.1| DNA repair protein RadC [Escherichia coli H252]
 gi|323954822|gb|EGB50602.1| DNA repair protein RadC [Escherichia coli H263]
 gi|323959886|gb|EGB55534.1| DNA repair protein RadC [Escherichia coli H489]
 gi|323965904|gb|EGB61352.1| DNA repair protein RadC [Escherichia coli M863]
 gi|323971280|gb|EGB66525.1| DNA repair protein RadC [Escherichia coli TA007]
 gi|323975142|gb|EGB70247.1| DNA repair protein RadC [Escherichia coli TW10509]
 gi|324111532|gb|EGC05513.1| DNA repair protein RadC [Escherichia fergusonii B253]
 gi|326337363|gb|EGD61198.1| DNA repair protein RadC [Escherichia coli O157:H7 str. 1044]
 gi|326339888|gb|EGD63695.1| DNA repair protein RadC [Escherichia coli O157:H7 str. 1125]
 gi|327250764|gb|EGE62466.1| DNA repair protein radC [Escherichia coli STEC_7v]
 gi|331053173|gb|EGI25206.1| DNA repair protein RadC [Escherichia coli TA206]
 gi|331057773|gb|EGI29759.1| DNA repair protein RadC [Escherichia coli TA143]
          Length = 222

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|301646528|ref|ZP_07246401.1| DNA repair protein RadC domain protein [Escherichia coli MS 146-1]
 gi|301075233|gb|EFK90039.1| DNA repair protein RadC domain protein [Escherichia coli MS 146-1]
          Length = 116

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 20  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 79

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 80  LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEYGLL 116


>gi|268325239|emb|CBH38827.1| probable DNA repair protein radC homolog [uncultured archaeon]
          Length = 329

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N  I DE    GT++   VY REIV+  +  +A S+I VHNHPSG+P PS +D 
Sbjct: 214 IFLDSANQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDR 273

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++++   N + I V DHIIIG + + SF    ++
Sbjct: 274 AITEDLVYACNLVQITVLDHIIIGDNVYFSFADEGLL 310


>gi|148260493|ref|YP_001234620.1| DNA repair protein RadC [Acidiphilium cryptum JF-5]
 gi|146402174|gb|ABQ30701.1| DNA repair protein RadC [Acidiphilium cryptum JF-5]
          Length = 255

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/97 (54%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQS GT++H P+Y RE+++R LE  AT+IILVHNHPSG+P PS  D+
Sbjct: 159 LFLDQRNRLIADEVQSVGTVNHTPLYPRELIRRALEHHATAIILVHNHPSGDPTPSPEDV 218

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I    + L+I++HDH+I+G   +VS K L ++
Sbjct: 219 AMTREIKQAASTLSIVLHDHVIVGNGKWVSLKRLGLL 255


>gi|260580042|ref|ZP_05847872.1| DNA repair protein [Haemophilus influenzae RdAW]
 gi|329122974|ref|ZP_08251545.1| DNA repair protein RadC [Haemophilus aegyptius ATCC 11116]
 gi|260093326|gb|EEW77259.1| DNA repair protein [Haemophilus influenzae RdAW]
 gi|327471905|gb|EGF17345.1| DNA repair protein RadC [Haemophilus aegyptius ATCC 11116]
          Length = 234

 Score =  132 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 138 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 234


>gi|301169677|emb|CBW29278.1| protein associated with replication fork, possible DNA repair
           protein [Haemophilus influenzae 10810]
          Length = 234

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 138 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 234


>gi|260870368|ref|YP_003236770.1| protein associated with replication fork [Escherichia coli O111:H-
           str. 11128]
 gi|257766724|dbj|BAI38219.1| protein associated with replication fork [Escherichia coli O111:H-
           str. 11128]
          Length = 222

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|188495548|ref|ZP_03002818.1| DNA repair protein RadC [Escherichia coli 53638]
 gi|188490747|gb|EDU65850.1| DNA repair protein RadC [Escherichia coli 53638]
          Length = 222

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|237806959|ref|YP_002891399.1| DNA repair protein RadC [Tolumonas auensis DSM 9187]
 gi|259551912|sp|C4L814|Y183_TOLAT RecName: Full=UPF0758 protein Tola_0183
 gi|237499220|gb|ACQ91813.1| DNA repair protein RadC [Tolumonas auensis DSM 9187]
          Length = 224

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + ++       GTID   VY REIVQ  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 128 LLLDNQHRVLRFCELFFGTIDAASVYPREIVQTVLKHNAAAVILCHNHPSGVAEPSHADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ I   L  +++ V DH +IG    VSF     +
Sbjct: 188 HITERICDALRLIDVRVLDHFVIGDGDPVSFAERGWL 224


>gi|218691922|ref|YP_002400134.1| DNA repair protein RadC [Escherichia coli ED1a]
 gi|254789651|sp|B7N279|YICR_ECO81 RecName: Full=UPF0758 protein yicR
 gi|218429486|emb|CAR10450.2| protein associated with replication fork, putative DNA repair
           protein [Escherichia coli ED1a]
 gi|222035346|emb|CAP78091.1| DNA repair protein radC [Escherichia coli LF82]
 gi|281180684|dbj|BAI57014.1| DNA repair protein [Escherichia coli SE15]
 gi|312948199|gb|ADR29026.1| DNA repair protein RadC [Escherichia coli O83:H1 str. NRG 857C]
          Length = 222

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|308271126|emb|CBX27735.1| DNA repair protein radC homolog [uncultured Desulfobacterium sp.]
          Length = 243

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I  E   +G++    VY RE+ +  L+  A ++I  HNHPSG+P PS  DI
Sbjct: 133 IFLDAKNKVIRTETLFKGSLTSSSVYPREVAKAALDYHAAALIFAHNHPSGDPAPSPEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     + +IVH+HIIIG + + SF     I
Sbjct: 193 AVTRQLIFACKVMGVIVHEHIIIGDNKYFSFADHGYI 229


>gi|110643879|ref|YP_671609.1| DNA repair protein RadC [Escherichia coli 536]
 gi|170018132|ref|YP_001723086.1| DNA repair protein RadC [Escherichia coli ATCC 8739]
 gi|110345471|gb|ABG71708.1| DNA repair protein RadC [Escherichia coli 536]
 gi|169753060|gb|ACA75759.1| DNA repair protein RadC [Escherichia coli ATCC 8739]
 gi|307555737|gb|ADN48512.1| DNA repair protein [Escherichia coli ABU 83972]
          Length = 214

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 118 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 178 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 214


>gi|257869998|ref|ZP_05649651.1| DNA repair protein RadC [Enterococcus gallinarum EG2]
 gi|257804162|gb|EEV32984.1| DNA repair protein RadC [Enterococcus gallinarum EG2]
          Length = 226

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++    + REI    +   A  +I VHNHPSG+P PS ADI
Sbjct: 128 LYLNTKNEIIQKKTLFIGSLNQSIAHPREIYHGAVRCCAARVICVHNHPSGSPQPSQADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ ++     + I + DH+IIG ++++S +   +
Sbjct: 188 TFTKRLMKCGELMGIDLLDHLIIGNNSYISLREEGL 223


>gi|325292997|ref|YP_004278861.1| DNA repair protein RadC [Agrobacterium sp. H13-3]
 gi|325060850|gb|ADY64541.1| DNA repair protein RadC [Agrobacterium sp. H13-3]
          Length = 281

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 68/97 (70%), Positives = 80/97 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ +GT+DH PVY RE+V+R LELS+T++IL+HNHPSG+P PS ADI
Sbjct: 185 LFLDKRNVLIADEVQGQGTVDHTPVYPREVVRRALELSSTALILIHNHPSGDPTPSRADI 244

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II T  PL I VHDHIIIGKD   SFKGLR+I
Sbjct: 245 EMTKTIIDTAKPLGIAVHDHIIIGKDGHASFKGLRLI 281


>gi|330447140|ref|ZP_08310790.1| DNA repair RadC family protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491331|dbj|GAA05287.1| DNA repair RadC family protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 224

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTID   VY RE+V+R LEL+A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVINGETLFEGTIDCASVYPREVVKRSLELNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I  +L  ++I V DH +IG    VSF     +
Sbjct: 188 RITRKISDSLALVDIRVLDHFVIGDGEIVSFAERGWL 224


>gi|319644748|ref|ZP_07998981.1| RadC protein [Bacillus sp. BT1B_CT2]
 gi|317392557|gb|EFV73351.1| RadC protein [Bacillus sp. BT1B_CT2]
          Length = 97

 Score =  132 bits (333), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 55/97 (56%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          ++L+  N +I       G+++   V+ RE+ +  L+ SA S I VHNHPSG+P PS  DI
Sbjct: 1  MYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEALKRSAASFICVHNHPSGDPAPSREDI 60

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +TQ +  +   L I + DHIIIG   FVS K    +
Sbjct: 61 EVTQRLHESGQLLGIELLDHIIIGDQKFVSLKEKGYL 97


>gi|322515256|ref|ZP_08068254.1| DNA repair protein RadC [Actinobacillus ureae ATCC 25976]
 gi|322118761|gb|EFX90967.1| DNA repair protein RadC [Actinobacillus ureae ATCC 25976]
          Length = 224

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/94 (40%), Positives = 57/94 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI  E    GTI+   VY REI++  L+ +A +II+ HNHPSG+  PS++D 
Sbjct: 124 MFLDNQNRLIKKEKMFYGTINQATVYPREIIKEALKCNAAAIIVAHNHPSGHCTPSESDR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ I    + + I   DHI++GK  + SF+  
Sbjct: 184 ILTKKIEMACDLVEIRFVDHIVVGKGDYFSFEEE 217


>gi|259906759|ref|YP_002647115.1| DNA repair protein RadC [Erwinia pyrifoliae Ep1/96]
 gi|224962381|emb|CAX53836.1| DNA repair protein RadC [Erwinia pyrifoliae Ep1/96]
 gi|283476545|emb|CAY72373.1| Glutaredoxin 3 [Erwinia pyrifoliae DSM 12163]
          Length = 223

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F D  + +I       GT++ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 127 IFFDNQHRVIHTSEMFSGTLNSVEVHPREIVREALKRNAAALILAHNHPSGLAEPSRADR 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ I+   + +NI V DH++IG+  +VSF     +
Sbjct: 187 DITQQIVHACSLMNIRVLDHMVIGRGEYVSFAERGWM 223


>gi|324019747|gb|EGB88966.1| DNA repair protein RadC [Escherichia coli MS 117-3]
          Length = 215

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 119 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 178

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 179 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 215


>gi|331685301|ref|ZP_08385887.1| DNA repair protein RadC [Escherichia coli H299]
 gi|331077672|gb|EGI48884.1| DNA repair protein RadC [Escherichia coli H299]
          Length = 222

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|253995755|ref|YP_003047819.1| DNA repair protein RadC [Methylotenera mobilis JLW8]
 gi|253982434|gb|ACT47292.1| DNA repair protein RadC [Methylotenera mobilis JLW8]
          Length = 224

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L A E    GT+    VY RE+V+R +  +A S+IL HNHPSG    S AD 
Sbjct: 128 LFLDAQNRLNAAEELFSGTLTQTSVYPREVVKRAMHHNAASVILAHNHPSGVAQQSAADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH I+  +  +SF    ++
Sbjct: 188 LLTQQLKQALALVDVRVLDHFIVAGNQTLSFAERGLL 224


>gi|145301064|ref|YP_001143905.1| DNA repair protein RadC [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142853836|gb|ABO92157.1| DNA repair protein RadC [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 327

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I       GT+D   V+ REIVQ  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 231 LLLDNQHRVIQFVELFYGTLDSASVWPREIVQIALKHNAAAVILAHNHPSGVAEPSRADR 290

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I+  L  ++I V DH++IG    VSF     +
Sbjct: 291 QITDRILAALALIDIRVLDHLVIGDGITVSFAERGWL 327


>gi|89067385|ref|ZP_01154898.1| DNA repair protein RadC [Oceanicola granulosus HTCC2516]
 gi|89046954|gb|EAR53008.1| DNA repair protein RadC [Oceanicola granulosus HTCC2516]
          Length = 255

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+L+ADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 159 LFLDRKNVLVADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSQADI 218

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  I    + L I++HDHI+IG+   +SF+   ++
Sbjct: 219 DMTAQIARAADALGILLHDHIVIGRSRELSFRAEGLL 255


>gi|325277161|ref|ZP_08142806.1| DNA repair protein RadC [Pseudomonas sp. TJI-51]
 gi|324097699|gb|EGB95900.1| DNA repair protein RadC [Pseudomonas sp. TJI-51]
          Length = 165

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +IA E   RGT+D   VY REIV+  LE +A +IILVHNHPSG+P PS AD 
Sbjct: 69  LMLDSRHRVIAFEEVFRGTLDGASVYPREIVKIALEHNAAAIILVHNHPSGDPEPSQADR 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +   LN + +   DH+++G++  VS      +
Sbjct: 129 NLTTKLQDALNLVGVRTLDHVVVGQEDCVSLAERGYL 165


>gi|300927932|ref|ZP_07143491.1| DNA repair protein RadC [Escherichia coli MS 187-1]
 gi|300464024|gb|EFK27517.1| DNA repair protein RadC [Escherichia coli MS 187-1]
          Length = 224

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGKYVSFAERGWI 224


>gi|300948028|ref|ZP_07162169.1| DNA repair protein RadC [Escherichia coli MS 116-1]
 gi|300954468|ref|ZP_07166918.1| DNA repair protein RadC [Escherichia coli MS 175-1]
 gi|300318547|gb|EFJ68331.1| DNA repair protein RadC [Escherichia coli MS 175-1]
 gi|300452423|gb|EFK16043.1| DNA repair protein RadC [Escherichia coli MS 116-1]
          Length = 224

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHCRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224


>gi|293417099|ref|ZP_06659726.1| DNA repair protein RadC [Escherichia coli B185]
 gi|291431130|gb|EFF04123.1| DNA repair protein RadC [Escherichia coli B185]
          Length = 224

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 128 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 188 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 224


>gi|126734464|ref|ZP_01750211.1| DNA repair protein RadC [Roseobacter sp. CCS2]
 gi|126717330|gb|EBA14194.1| DNA repair protein RadC [Roseobacter sp. CCS2]
          Length = 255

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/96 (61%), Positives = 74/96 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +IADE Q++GT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PSDADI
Sbjct: 155 LFLDTKNTVIADEEQAKGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSDADI 214

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            MT+ I      L IIVHDH+IIGK    SF+ L +
Sbjct: 215 QMTRQIDAAAKSLGIIVHDHLIIGKSNETSFRALGL 250


>gi|330505620|ref|YP_004382489.1| DNA repair protein RadC [Pseudomonas mendocina NK-01]
 gi|328919906|gb|AEB60737.1| DNA repair protein RadC [Pseudomonas mendocina NK-01]
          Length = 234

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV  RG+ID   VY R++V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 138 LFLDAKHRVLAFEVLFRGSIDSASVYPRQVVKRSLANNAAAVILTHNHPSGVSEPSQADR 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  + + V DH I+G    +S   L  +
Sbjct: 198 VLTQRLKDALALVEVRVLDHFIVGDGEPLSMAELGWM 234


>gi|21243016|ref|NP_642598.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108524|gb|AAM37134.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 164

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +IA E  + GTI+   V+ R +V+R +EL+A ++IL HNHPSG    S AD 
Sbjct: 68  VFLDNKHRVIAFEALALGTINQAIVHPRVVVRRAMELNAAAVILAHNHPSGETQDSTADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + + L+ ++I V DH+I+GK    SF    ++
Sbjct: 128 MLTERLRSALDFVDIRVLDHVIVGKGTPYSFAQAGLL 164


>gi|326403686|ref|YP_004283768.1| DNA repair protein RadC [Acidiphilium multivorum AIU301]
 gi|325050548|dbj|BAJ80886.1| DNA repair protein RadC [Acidiphilium multivorum AIU301]
          Length = 255

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/97 (54%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQS GT++H P+Y RE+++R LE  AT+IILVHNHPSG+P PS  D+
Sbjct: 159 LFLDQRNRLIADEVQSVGTVNHTPLYPRELIRRALEHHATAIILVHNHPSGDPTPSPEDV 218

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I    + L+I++HDH+I+G   +VS K L ++
Sbjct: 219 AMTREIKQAASTLSIVLHDHVIVGNGKWVSLKRLGLL 255


>gi|308070402|ref|YP_003872007.1| DNA repair protein radC [Paenibacillus polymyxa E681]
 gi|305859681|gb|ADM71469.1| DNA repair protein radC [Paenibacillus polymyxa E681]
          Length = 230

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +IA E  S G+++   V+ RE+ +  ++ S+ SII  HNHPSG+P PS  D+
Sbjct: 134 LFLNTKNHVIAQETLSMGSLNSAIVHPREVFRAAIKCSSASIICAHNHPSGDPKPSPEDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++   N + I V DHI+IG   FVS K   +I
Sbjct: 194 QLTRRLMEAGNIVGIDVLDHIVIGDGTFVSLKEQGLI 230


>gi|153208645|ref|ZP_01946897.1| DNA repair protein RadC [Coxiella burnetii 'MSU Goat Q177']
 gi|154707167|ref|YP_001425121.1| DNA repair protein [Coxiella burnetii Dugway 5J108-111]
 gi|165919790|ref|ZP_02219533.1| DNA repair protein RadC [Coxiella burnetii RSA 334]
 gi|212218127|ref|YP_002304914.1| DNA repair protein [Coxiella burnetii CbuK_Q154]
 gi|189029394|sp|A9KGS6|Y1789_COXBN RecName: Full=UPF0758 protein CBUD_1789
 gi|238054487|sp|B6J5S7|Y488_COXB1 RecName: Full=UPF0758 protein CbuK_0488
 gi|120575831|gb|EAX32455.1| DNA repair protein RadC [Coxiella burnetii 'MSU Goat Q177']
 gi|154356453|gb|ABS77915.1| DNA repair protein [Coxiella burnetii Dugway 5J108-111]
 gi|165916873|gb|EDR35477.1| DNA repair protein RadC [Coxiella burnetii RSA 334]
 gi|212012389|gb|ACJ19769.1| DNA repair protein [Coxiella burnetii CbuK_Q154]
          Length = 224

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    G+I+   V+ REI++R L  ++ ++I+ HNHPSG P+PS AD 
Sbjct: 128 LFLDNRHRIIQFEKLFYGSINQASVHPREIIKRALYHNSAALIVAHNHPSGVPDPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T ++   L  +++ + DHIIIG     SF    ++
Sbjct: 188 AATTHLKEALALIDVRLLDHIIIGDRNSFSFAESGLL 224


>gi|86136816|ref|ZP_01055394.1| DNA repair protein RadC [Roseobacter sp. MED193]
 gi|85826140|gb|EAQ46337.1| DNA repair protein RadC [Roseobacter sp. MED193]
          Length = 258

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/97 (57%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADE Q+RGT+DHVPVY RE+ +R L+L+A+++ILVHNHPSG+P PS +DI
Sbjct: 162 LFLDRKNCLIADEEQARGTVDHVPVYPREVAKRALDLNASALILVHNHPSGDPTPSASDI 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  I   L PL + +HDH+IIG DA +SF+   ++
Sbjct: 222 DMTGRINQALTPLGVTLHDHLIIGSDAELSFRSEGLL 258


>gi|310643582|ref|YP_003948340.1| DNA repair protein radc [Paenibacillus polymyxa SC2]
 gi|309248532|gb|ADO58099.1| DNA repair protein RadC [Paenibacillus polymyxa SC2]
          Length = 230

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +IA E  S G+++   V+ RE+ +  ++ S+ SII  HNHPSG+P PS  D+
Sbjct: 134 LFLNTKNHVIAQETLSMGSLNSAIVHPREVFRAAIKCSSASIICAHNHPSGDPKPSPEDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++   N + I V DHI+IG   FVS K   +I
Sbjct: 194 QLTRRLMEAGNIVGIDVLDHIVIGDGTFVSLKEQGLI 230


>gi|297581793|ref|ZP_06943714.1| DNA repair protein RadC family protein [Vibrio cholerae RC385]
 gi|297533887|gb|EFH72727.1| DNA repair protein RadC family protein [Vibrio cholerae RC385]
          Length = 157

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEINAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157


>gi|310765969|gb|ADP10919.1| DNA repair protein RadC [Erwinia sp. Ejp617]
          Length = 223

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F D  + +I       GT++ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 127 IFFDNQHRVIHTSEMFSGTLNSVEVHPREIVREALKRNAAALILAHNHPSGLAEPSRADR 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ I+   + +NI V DH++IG+  +VSF     +
Sbjct: 187 DITQQIVHACSLMNIRVLDHMVIGRGEYVSFAERGWM 223


>gi|26248376|ref|NP_754416.1| putative radC-like protein yeeS [Escherichia coli CFT073]
 gi|26108780|gb|AAN80983.1|AE016762_236 Putative radC-like protein yeeS [Escherichia coli CFT073]
          Length = 148

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++  L  +A +++L HNHPSG   PS AD 
Sbjct: 52  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKCALYHNAAAVVLAHNHPSGEVTPSKADR 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 112 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 148


>gi|70733334|ref|YP_263109.1| DNA repair protein RadC [Pseudomonas fluorescens Pf-5]
 gi|123652038|sp|Q4K3S4|Y6051_PSEF5 RecName: Full=UPF0758 protein PFL_6051
 gi|68347633|gb|AAY95239.1| DNA repair protein RadC [Pseudomonas fluorescens Pf-5]
          Length = 224

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  EV  +G+ID   VY R++++R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDTRHRVLTFEVLFQGSIDSTTVYPRQVIKRALAHNAAAVILCHNHPSGICEPSPADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+G+   +S      I
Sbjct: 188 VVTRRLQEALELIDVRVLDHFIVGEGDPLSMAEYGWI 224


>gi|301028397|ref|ZP_07191643.1| DNA repair protein RadC [Escherichia coli MS 196-1]
 gi|299878508|gb|EFI86719.1| DNA repair protein RadC [Escherichia coli MS 196-1]
          Length = 222

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHCRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|91774671|ref|YP_544427.1| DNA repair protein RadC [Methylobacillus flagellatus KT]
 gi|122985645|sp|Q1H4K1|Y315_METFK RecName: Full=UPF0758 protein Mfla_0315
 gi|91708658|gb|ABE48586.1| DNA replication and repair protein RadC [Methylobacillus
           flagellatus KT]
          Length = 224

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E    GT+    VY RE+V+  L  +A ++I  HNHPSG P PS AD 
Sbjct: 128 IFLDAQHRVLAVEELFSGTLTQTSVYPREVVKCALRHNAAAMIFAHNHPSGVPEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   LN ++I V DH ++  +  VSF    +I
Sbjct: 188 ALTEALKAALNLIDIRVLDHFVVAGNQLVSFSERGLI 224


>gi|188993439|ref|YP_001905449.1| DNA repair protein RadC [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167735199|emb|CAP53411.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris]
          Length = 243

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++++ HNHPSGNP PS+AD 
Sbjct: 146 LFLDSRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSEADR 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++  L  ++I + DH +IG    VS      +
Sbjct: 206 AVTQRLLQALGLVDIRLLDHFVIGDGRPVSLAERGWV 242


>gi|226311419|ref|YP_002771313.1| DNA repair protein RadC [Brevibacillus brevis NBRC 100599]
 gi|226094367|dbj|BAH42809.1| probable DNA repair protein RadC [Brevibacillus brevis NBRC 100599]
          Length = 232

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G++D   V+ RE+ +  +  S+ S+I +HNHPSG+P PS  DI
Sbjct: 136 LFLNTKNHVIGKQTIFVGSLDASIVHPREVFKEAIRRSSASVICLHNHPSGDPTPSREDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      + I + DH+IIG+  +VS K    +
Sbjct: 196 AITHTLRDAGELVGISLLDHVIIGEGKYVSLKEQGYL 232


>gi|261418366|ref|YP_003252048.1| DNA repair protein RadC [Geobacillus sp. Y412MC61]
 gi|319767675|ref|YP_004133176.1| DNA repair protein RadC [Geobacillus sp. Y412MC52]
 gi|261374823|gb|ACX77566.1| DNA repair protein RadC [Geobacillus sp. Y412MC61]
 gi|317112541|gb|ADU95033.1| DNA repair protein RadC [Geobacillus sp. Y412MC52]
          Length = 226

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +    G+++   V+ RE+ +  ++ SA S+I VHNHPSG+P PS  DI
Sbjct: 130 IYLNTKNQVIYRKTVFIGSLNASIVHPREVFKEAIKRSAASVICVHNHPSGDPTPSREDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DH+IIG   FVS K    +
Sbjct: 190 DVTKRLAECGRIIGIELLDHLIIGDQKFVSLKEKGYV 226


>gi|110642215|ref|YP_669945.1| putative radC-like protein YeeS [Escherichia coli 536]
 gi|110343807|gb|ABG70044.1| putative radC-like protein YeeS [Escherichia coli 536]
          Length = 158

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+  E+++  L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPWEVIKCALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 158


>gi|227821958|ref|YP_002825929.1| DNA repair protein RadC [Sinorhizobium fredii NGR234]
 gi|254789656|sp|C3MBW4|Y1397_RHISN RecName: Full=UPF0758 protein NGR_c13970
 gi|227340958|gb|ACP25176.1| DNA repair protein RadC [Sinorhizobium fredii NGR234]
          Length = 263

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 66/96 (68%), Positives = 75/96 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ +GTIDH PVY RE+V+R LELSAT++IL HNHPSG+P PS ADI
Sbjct: 167 LFLDKRNALIADEVQQQGTIDHTPVYPREVVKRALELSATALILAHNHPSGDPTPSRADI 226

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            MT+ I     PL I VHDH+IIGKD  VS KGLR+
Sbjct: 227 EMTKLIAEAAKPLGITVHDHVIIGKDGHVSMKGLRL 262


>gi|253771521|ref|YP_003034352.1| DNA repair protein RadC [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254163566|ref|YP_003046674.1| DNA repair protein RadC [Escherichia coli B str. REL606]
 gi|297521446|ref|ZP_06939832.1| DNA repair protein RadC [Escherichia coli OP50]
 gi|242379162|emb|CAQ33964.1| hypothetical protein B21_03447 [Escherichia coli BL21(DE3)]
 gi|253322565|gb|ACT27167.1| DNA repair protein RadC [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975467|gb|ACT41138.1| DNA repair protein RadC [Escherichia coli B str. REL606]
 gi|253979623|gb|ACT45293.1| DNA repair protein RadC [Escherichia coli BL21(DE3)]
          Length = 222

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGKYVSFAERGWI 222


>gi|160947462|ref|ZP_02094629.1| hypothetical protein PEPMIC_01396 [Parvimonas micra ATCC 33270]
 gi|158446596|gb|EDP23591.1| hypothetical protein PEPMIC_01396 [Parvimonas micra ATCC 33270]
          Length = 287

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I+ +  S+G ++   V+ RE+ +  L  SA SII +HNHPSG+P PS  DI
Sbjct: 190 LLLDTKNKIISWDEISKGDLNSSIVHPREVFKYALRYSANSIICLHNHPSGDPTPSSQDI 249

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +    + + I + DHIIIG + +VS K   ++
Sbjct: 250 DITKRLEEVGDLVGIRLLDHIIIGYNKYVSLKEKGLM 286


>gi|229846012|ref|ZP_04466124.1| DNA repair protein RadC [Haemophilus influenzae 7P49H1]
 gi|229811016|gb|EEP46733.1| DNA repair protein RadC [Haemophilus influenzae 7P49H1]
          Length = 214

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 118 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 178 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 214


>gi|222110476|ref|YP_002552740.1| DNA repair protein Radc [Acidovorax ebreus TPSY]
 gi|221729920|gb|ACM32740.1| DNA repair protein RadC [Acidovorax ebreus TPSY]
          Length = 168

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI      RGTID   VY RE+V+  L L+A +++  HNHPSG+P PS AD 
Sbjct: 72  LFLDSQHRLIEYVELFRGTIDQASVYPREVVKEALRLNAAAVVFSHNHPSGSPEPSQADR 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++   DHI++G     SF    ++
Sbjct: 132 VLTQRLKEALALVDVRTLDHIVVGGAVTTSFAECGLL 168


>gi|257888395|ref|ZP_05668048.1| DNA repair protein RadC [Enterococcus faecium 1,141,733]
 gi|257824449|gb|EEV51381.1| DNA repair protein RadC [Enterococcus faecium 1,141,733]
          Length = 230

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G+++    + REI    +   A  I+L HNHPSGN  PS  D+
Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N T+ I      + I V DH+IIG+  + S +   ++
Sbjct: 191 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGLM 227


>gi|254513496|ref|ZP_05125561.1| DNA repair protein RadC [Rhodobacteraceae bacterium KLH11]
 gi|221532500|gb|EEE35496.1| DNA repair protein RadC [Rhodobacteraceae bacterium KLH11]
          Length = 312

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/97 (55%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LI+DE Q++GT+DHVPVY REIV+R LEL+A+S+ILVHNHPSG+P PS +DI
Sbjct: 213 LYLDRKNVLISDEEQAKGTVDHVPVYPREIVKRALELNASSLILVHNHPSGDPTPSRSDI 272

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  ++   + L I++HDH+IIGK    SF     +
Sbjct: 273 EMTDRVLDACDTLGILIHDHVIIGKKEEYSFSANGFL 309


>gi|285017189|ref|YP_003374900.1| DNA repair protein radc [Xanthomonas albilineans GPE PC73]
 gi|283472407|emb|CBA14912.1| probable dna repair protein radc [Xanthomonas albilineans]
          Length = 224

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E   +GT+D   V+ RE+V+R L L+A +II+ HNHPSGNP PS AD 
Sbjct: 128 LFLDTRHRWLAFEELFQGTVDWTEVHPREVVRRALTLNAAAIIIGHNHPSGNPEPSSADF 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L+ +++ + DH IIG    +S      I
Sbjct: 188 AVTERLRKALDLIDVRLLDHFIIGDGMPISLASRGWI 224


>gi|308174501|ref|YP_003921206.1| DNA repair protein [Bacillus amyloliquefaciens DSM 7]
 gi|307607365|emb|CBI43736.1| putative DNA repair protein [Bacillus amyloliquefaciens DSM 7]
 gi|328554420|gb|AEB24912.1| hypothetical protein BAMTA208_13755 [Bacillus amyloliquefaciens
           TA208]
 gi|328912824|gb|AEB64420.1| putative DNA repair protein [Bacillus amyloliquefaciens LL3]
          Length = 231

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G+++   V+ RE+ +   + SA S I VHNHPSG+P PS  DI
Sbjct: 135 LYLNTKNQVIHKRTIFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    N + I + DH++IG   FVS K    +
Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231


>gi|85859097|ref|YP_461299.1| DNA repair protein [Syntrophus aciditrophicus SB]
 gi|85722188|gb|ABC77131.1| DNA repair protein [Syntrophus aciditrophicus SB]
          Length = 308

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 66/97 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +IA E   +G ++   VY R++++R L   ++++ILVHNHPSG   PSDADI
Sbjct: 210 LYLDTQNRIIAFETIQKGIVNQAVVYPRQVIERALSHKSSALILVHNHPSGFVKPSDADI 269

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I  T   L+I+VHDH+IIG++ F SF+   I+
Sbjct: 270 RLTRTITDTAKLLDIMVHDHLIIGENRFFSFREEGIM 306


>gi|268325704|emb|CBH39292.1| probable DNA repair protein radC homolog [uncultured archaeon]
          Length = 330

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N  I DE    GT++   VY REIV+  +  +A S+I VHNHPSG+P PS +D 
Sbjct: 215 IFLDSANQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDR 274

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++I   N + I V DHIIIG + + SF    ++
Sbjct: 275 AITEDLIYACNLVQITVLDHIIIGDNVYFSFADEGLL 311


>gi|153834271|ref|ZP_01986938.1| DNA repair protein RadC [Vibrio harveyi HY01]
 gi|148869373|gb|EDL68382.1| DNA repair protein RadC [Vibrio harveyi HY01]
          Length = 305

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + + + E    GT++   VY RE+V++ L  +A+++I  HNHPSG   PS AD 
Sbjct: 209 IFLDNQHRVRSSEELFTGTVNAASVYPREVVKKALAENASAVIFYHNHPSGVAEPSQADR 268

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I  L  +++ V DH ++  +  VSF     I
Sbjct: 269 RITRRLIDALALIDVRVLDHFVVSFEDTVSFAERGWI 305


>gi|145640620|ref|ZP_01796203.1| DNA repair protein RadC [Haemophilus influenzae R3021]
 gi|145274546|gb|EDK14409.1| DNA repair protein RadC [Haemophilus influenzae 22.4-21]
          Length = 221

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 185 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 221


>gi|68249540|ref|YP_248652.1| DNA repair protein RadC [Haemophilus influenzae 86-028NP]
 gi|68057739|gb|AAX87992.1| DNA repair protein RadC homolog [Haemophilus influenzae 86-028NP]
          Length = 234

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 138 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 234


>gi|21233283|ref|NP_639200.1| DNA repair protein RadC [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66770241|ref|YP_245003.1| DNA repair protein RadC [Xanthomonas campestris pv. campestris str.
           8004]
 gi|25009021|sp|Q8P456|Y3860_XANCP RecName: Full=UPF0758 protein XCC3860
 gi|81303811|sp|Q4UPP0|Y3944_XANC8 RecName: Full=UPF0758 protein XC_3944
 gi|21115121|gb|AAM43091.1| DNA repair protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66575573|gb|AAY50983.1| DNA repair protein [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 225

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++++ HNHPSGNP PS+AD 
Sbjct: 128 LFLDSRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++  L  ++I + DH +IG    VS      +
Sbjct: 188 AVTQRLLQALGLVDIRLLDHFVIGDGRPVSLAERGWV 224


>gi|197120145|ref|YP_002140572.1| DNA repair protein RadC [Geobacter bemidjiensis Bem]
 gi|197089505|gb|ACH40776.1| protein of unknown function DUF2466 [Geobacter bemidjiensis Bem]
          Length = 231

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I+    S G+++   V+ RE+    +  SA ++IL+HNHP+G+P PS  D+
Sbjct: 135 LLLDGKNRIISRAQISEGSLNQSIVHPREVFNVAVRHSAAAMILLHNHPTGDPAPSPEDM 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I V DHIIIG++ F SF     +
Sbjct: 195 EVTRRLCEAGQLLGIRVLDHIIIGENEFYSFAEHGRL 231


>gi|323166879|gb|EFZ52618.1| DNA repair radC domain protein [Shigella sonnei 53G]
          Length = 171

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 75  IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 134

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 135 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 171


>gi|262273497|ref|ZP_06051311.1| DNA repair protein RadC [Grimontia hollisae CIP 101886]
 gi|262222475|gb|EEY73786.1| DNA repair protein RadC [Grimontia hollisae CIP 101886]
          Length = 224

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/97 (46%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N  IADE+   GTI+   VY RE+V+R LEL A ++IL HNHPSG   PS+AD 
Sbjct: 128 LYLDNQNRPIADEILFEGTINTAGVYPREVVKRSLELGANAVILAHNHPSGIAEPSNADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I   L  ++I + DH++IG    VSF     I
Sbjct: 188 HITHRIGDALALVDIRLLDHMVIGDGDVVSFAERGWI 224


>gi|167035736|ref|YP_001670967.1| DNA repair protein RadC [Pseudomonas putida GB-1]
 gi|166862224|gb|ABZ00632.1| DNA repair protein RadC [Pseudomonas putida GB-1]
          Length = 162

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGT+D   VY RE+V+  LE +A ++I+VHNHPSG+P PS AD 
Sbjct: 66  LLLDSKHRVIGFRELFRGTLDGASVYPREVVKIALEHNAAAVIMVHNHPSGDPEPSQADR 125

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   LN +   + DH+++G +  VS      +
Sbjct: 126 TLTTTLKNALNMVGTRILDHVVVGHEGCVSLAEQGYL 162


>gi|320666351|gb|EFX33350.1| hypothetical protein ECOSU61_04303 [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 222

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +N+ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMNLRVLDHIVIGRGEYVSFAERGWI 222


>gi|154686939|ref|YP_001422100.1| DNA repair protein RadC [Bacillus amyloliquefaciens FZB42]
 gi|166218774|sp|A7Z793|Y2509_BACA2 RecName: Full=UPF0758 protein RBAM_025090
 gi|154352790|gb|ABS74869.1| RadC [Bacillus amyloliquefaciens FZB42]
          Length = 231

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G+++   V+ RE+ +   + SA S I VHNHPSG+P PS  DI
Sbjct: 135 LYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    N + I + DH++IG   FVS K    +
Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231


>gi|15640534|ref|NP_230161.1| DNA repair protein RadC-related protein [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|153822183|ref|ZP_01974850.1| DNA repair protein RadC family protein [Vibrio cholerae B33]
 gi|229509016|ref|ZP_04398504.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229519684|ref|ZP_04409127.1| DNA repair protein RadC [Vibrio cholerae RC9]
 gi|229606200|ref|YP_002876848.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|254850747|ref|ZP_05240097.1| DNA repair protein RadC family protein [Vibrio cholerae MO10]
 gi|13431999|sp|Q9KUK8|Y510_VIBCH RecName: Full=UPF0758 protein VC_0510
 gi|9654937|gb|AAF93680.1| DNA repair protein RadC-related protein [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|126520318|gb|EAZ77541.1| DNA repair protein RadC family protein [Vibrio cholerae B33]
 gi|229344373|gb|EEO09348.1| DNA repair protein RadC [Vibrio cholerae RC9]
 gi|229353941|gb|EEO18875.1| DNA repair protein RadC [Vibrio cholerae B33]
 gi|229368855|gb|ACQ59278.1| DNA repair protein RadC [Vibrio cholerae MJ-1236]
 gi|254846452|gb|EET24866.1| DNA repair protein RadC family protein [Vibrio cholerae MO10]
          Length = 157

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +  TL  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDTLALVDVRVLDH-IVTGDTCTSFAERGWL 157


>gi|227354791|ref|ZP_03839208.1| DNA repair protein [Proteus mirabilis ATCC 29906]
 gi|227165109|gb|EEI49940.1| DNA repair protein [Proteus mirabilis ATCC 29906]
          Length = 165

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I  E   +GT+D V V+ REI+++ ++ +A SIIL HNHPSG   PS AD 
Sbjct: 69  LFLDNQNQMIDCEEMFKGTVDRVEVHPREIIRQSIKKNAASIILAHNHPSGLSEPSLADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I T    + I V DH+++G D  VSF     +
Sbjct: 129 QMTEKIFTACQLVGIKVLDHLVVGHDNCVSFAERGWL 165


>gi|161615563|ref|YP_001589528.1| hypothetical protein SPAB_03337 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|200390680|ref|ZP_03217291.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205351604|ref|YP_002225405.1| hypothetical protein SG0271 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|161364927|gb|ABX68695.1| hypothetical protein SPAB_03337 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|199603125|gb|EDZ01671.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205271385|emb|CAR36178.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326626631|gb|EGE32974.1| Putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 159

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E    GTI+H  V+ RE+V+  L+ +A ++I+ H HPSG  +PS AD 
Sbjct: 63  LFLDNQHRLIAHETLFSGTINHTQVHPREVVKSGLKHNAAAVIVAHCHPSGLADPSLADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L+ ++I + DH+++G    VSF     +
Sbjct: 123 QITERLRQALDLVDIRLLDHLVVGGMEIVSFAERGWL 159


>gi|220936022|ref|YP_002514921.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997332|gb|ACL73934.1| DNA repair protein RadC [Thioalkalivibrio sp. HL-EbGR7]
          Length = 166

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +IA E    GTID   VY R +++R +E + +++I  HNHPSG   PS AD 
Sbjct: 70  VFLDSQHRVIAFEPMFHGTIDGASVYPRAVLKRAIEHNCSAVIFAHNHPSGVTEPSHADK 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  + + L  +++ V DH I+G++   SF    ++
Sbjct: 130 AITTRLKSVLELVDVRVLDHFIVGEETPFSFAEAGLL 166


>gi|254448902|ref|ZP_05062357.1| DNA repair protein RadC [gamma proteobacterium HTCC5015]
 gi|198261439|gb|EDY85729.1| DNA repair protein RadC [gamma proteobacterium HTCC5015]
          Length = 224

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + +I  E   RGT+D   VY RE+V+  L+ +A ++I  HNHPSG   PS AD 
Sbjct: 128 LWLDTRHRVILYEELFRGTLDGASVYPREVVKAALKHNAAAVIFAHNHPSGIAEPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  ++I V DHI+IG     S     ++
Sbjct: 188 HITRRLKDALGLVDIRVLDHIVIGDGEHSSLANRGLL 224


>gi|300024876|ref|YP_003757487.1| DNA repair protein RadC [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526697|gb|ADJ25166.1| DNA repair protein RadC [Hyphomicrobium denitrificans ATCC 51888]
          Length = 254

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/97 (64%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY+RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 158 LFLDKKNALIADEVQGRGTVDHTPVYVREVVKRALELSATAIILVHNHPSGDPTPSRADI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ II    PL + VHDH+I+G+    S K LR+I
Sbjct: 218 DVTKQIIDAAKPLGVTVHDHVIVGRHGHASLKALRLI 254


>gi|297537568|ref|YP_003673337.1| DNA repair protein RadC [Methylotenera sp. 301]
 gi|297256915|gb|ADI28760.1| DNA repair protein RadC [Methylotenera sp. 301]
          Length = 224

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N ++  E    GT+    VY RE+V+R L  +A S+I  HNHPSG    S AD 
Sbjct: 128 LFLDAQNRVVTTEEMFSGTLTQTSVYPREVVKRALHHNAASVIFAHNHPSGLAQQSQADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  +  +SF    ++
Sbjct: 188 LITKQLKEALALVDVRVLDHFIVAGNTTLSFVERGLL 224


>gi|319775112|ref|YP_004137600.1| DNA repair protein RadC-like protein [Haemophilus influenzae F3047]
 gi|309973545|gb|ADO96746.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
 gi|317449703|emb|CBY85910.1| DNA repair protein RadC homolog [Haemophilus influenzae F3047]
          Length = 221

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 185 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 221


>gi|260847121|ref|YP_003224899.1| putative DNA repair protein [Escherichia coli O103:H2 str. 12009]
 gi|257762268|dbj|BAI33765.1| predicted DNA repair protein [Escherichia coli O103:H2 str. 12009]
          Length = 180

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    G+++HV V+ RE+V+  L  +A +++L HNHPSG+P PS  D 
Sbjct: 84  LYLDNQHRLLESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDR 143

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +   L  +++   DH+++G+D  VSF     +
Sbjct: 144 NITGRLKEALELVDVKTLDHLVVGRDGIVSFAERGWL 180


>gi|257897231|ref|ZP_05676884.1| DNA repair protein RadC [Enterococcus faecium Com12]
 gi|293378003|ref|ZP_06624181.1| DNA repair protein RadC [Enterococcus faecium PC4.1]
 gi|293570378|ref|ZP_06681435.1| DNA repair protein RadC [Enterococcus faecium E980]
 gi|257833796|gb|EEV60217.1| DNA repair protein RadC [Enterococcus faecium Com12]
 gi|291609556|gb|EFF38821.1| DNA repair protein RadC [Enterococcus faecium E980]
 gi|292643368|gb|EFF61500.1| DNA repair protein RadC [Enterococcus faecium PC4.1]
          Length = 230

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G+++    + REI    +   A  I+L HNHPSGN  PS  D+
Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N T+ I      + I V DH+IIG+  + S +   ++
Sbjct: 191 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGLM 227


>gi|83592071|ref|YP_425823.1| DNA repair protein RadC [Rhodospirillum rubrum ATCC 11170]
 gi|83574985|gb|ABC21536.1| DNA repair protein RadC [Rhodospirillum rubrum ATCC 11170]
          Length = 243

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/96 (51%), Positives = 66/96 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIADE+Q  GTI+H PVY RE+ +R LEL A +II+VHNHPSG+P PS AD 
Sbjct: 147 LFLDNRNRLIADELQQTGTINHTPVYPREVARRALELHAAAIIMVHNHPSGDPAPSAADQ 206

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           +MT  +   L  + + +HDHI++ +   VSF+   +
Sbjct: 207 DMTLQVRDALRAVGVGLHDHIVVARGGHVSFRSQGL 242


>gi|28198053|ref|NP_778367.1| DNA repair protein RadC [Xylella fastidiosa Temecula1]
 gi|32129952|sp|Q87F21|Y117_XYLFT RecName: Full=UPF0758 protein PD_0117
 gi|28056113|gb|AAO28016.1| DNA repair protein [Xylella fastidiosa Temecula1]
 gi|307579143|gb|ADN63112.1| DNA repair protein RadC [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 224

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  I+ E    GTI+   V+ RE+V+R L L+A ++I+ HNHPSGN  PS AD 
Sbjct: 128 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADQ 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ +++ + DH +IG  A VSF     +
Sbjct: 188 MITQRLKNALDLIDVRLVDHFVIGDGAPVSFAEHGWL 224


>gi|191165826|ref|ZP_03027664.1| DNA repair protein RadC [Escherichia coli B7A]
 gi|190904150|gb|EDV63861.1| DNA repair protein RadC [Escherichia coli B7A]
          Length = 157

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+  E    GTI+   V+ REIV+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T NI+ TL+ +N+ V DH IIG    +SF     +
Sbjct: 121 LITTNIVKTLDLVNVRVLDHFIIGAGDVLSFAERGWL 157


>gi|293557235|ref|ZP_06675783.1| DNA repair protein RadC [Enterococcus faecium E1039]
 gi|291600599|gb|EFF30903.1| DNA repair protein RadC [Enterococcus faecium E1039]
          Length = 230

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G+++    + REI    +   A  I+L HNHPSGN  PS  D+
Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N T+ I      + I V DH+IIG+  + S +   ++
Sbjct: 191 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 227


>gi|229918383|ref|YP_002887029.1| DNA repair protein RadC [Exiguobacterium sp. AT1b]
 gi|229469812|gb|ACQ71584.1| DNA repair protein RadC [Exiguobacterium sp. AT1b]
          Length = 209

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA +    G ++   V+ R++ +  L+LSA   I VHNHPSG+  PS  DI
Sbjct: 111 LYLNTKNQLIARKTLFVGGLNSSIVHPRDVFREALKLSAACFIAVHNHPSGDATPSREDI 170

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +++ ++   N + I   DH+IIG+D +VS K    +
Sbjct: 171 EVSERLVEAGNIVGIACLDHVIIGEDHYVSMKQRGYM 207


>gi|262191336|ref|ZP_06049528.1| DNA repair protein RadC [Vibrio cholerae CT 5369-93]
 gi|262032791|gb|EEY51337.1| DNA repair protein RadC [Vibrio cholerae CT 5369-93]
          Length = 157

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157


>gi|169831623|ref|YP_001717605.1| DNA repair protein RadC [Candidatus Desulforudis audaxviator
           MP104C]
 gi|229485551|sp|B1I4S0|Y1467_DESAP RecName: Full=UPF0758 protein Daud_1467
 gi|169638467|gb|ACA59973.1| DNA repair protein RadC [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 230

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N ++A E  S GT++   V+ RE+ +  +  SA ++ILVHNHPSG+P PS  DI
Sbjct: 134 LVLNTKNRVLAVEKVSVGTLNSSSVHPRELFKNAIRRSAAALILVHNHPSGDPAPSPQDI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +TQ +      + I V DHIIIG + F S K   +
Sbjct: 194 ELTQRLFEAGEIVGIKVLDHIIIGDNKFTSLKLEGL 229


>gi|145632338|ref|ZP_01788073.1| DNA repair protein RadC [Haemophilus influenzae 3655]
 gi|145634128|ref|ZP_01789839.1| DNA repair protein RadC [Haemophilus influenzae PittAA]
 gi|145637257|ref|ZP_01792918.1| DNA repair protein RadC [Haemophilus influenzae PittHH]
 gi|229843987|ref|ZP_04464128.1| DNA repair protein RadC [Haemophilus influenzae 6P18H1]
 gi|144987245|gb|EDJ93775.1| DNA repair protein RadC [Haemophilus influenzae 3655]
 gi|145268572|gb|EDK08565.1| DNA repair protein RadC [Haemophilus influenzae PittAA]
 gi|145269509|gb|EDK09451.1| DNA repair protein RadC [Haemophilus influenzae PittHH]
 gi|229812981|gb|EEP48669.1| DNA repair protein RadC [Haemophilus influenzae 6P18H1]
          Length = 214

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 118 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 178 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 214


>gi|157373074|ref|YP_001481063.1| DNA repair protein RadC [Serratia proteamaculans 568]
 gi|172047792|sp|A8GLE5|Y4842_SERP5 RecName: Full=UPF0758 protein Spro_4842
 gi|157324838|gb|ABV43935.1| DNA repair protein RadC [Serratia proteamaculans 568]
          Length = 227

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI  V VY REIV+  L+ +A +IIL HNHPSG   PS AD 
Sbjct: 131 LFLDNQHRVIRHQEMFAGTISSVVVYPREIVREALKANAAAIILAHNHPSGKAEPSHADR 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L I V DH++IG+   VSF     +
Sbjct: 191 LITEQVVNACLLLEIRVLDHLVIGRGECVSFAERGWL 227


>gi|264679954|ref|YP_003279863.1| DNA repair protein RadC [Comamonas testosteroni CNB-2]
 gi|262210469|gb|ACY34567.1| DNA repair protein RadC [Comamonas testosteroni CNB-2]
          Length = 230

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V R L   A ++IL HNHPSGN  PS AD 
Sbjct: 134 LFLDSQNRLLALEEMFRGTLTQTSVYPREVVLRALHHQAGAVILAHNHPSGNVQPSSADS 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DHII+G  A  S     ++
Sbjct: 194 ALTATLKAALALIDVRVLDHIIVGPGAACSMAEEGLL 230


>gi|148560082|ref|YP_001259197.1| DNA repair protein RadC [Brucella ovis ATCC 25840]
 gi|254706546|ref|ZP_05168374.1| DNA repair protein RadC [Brucella pinnipedialis M163/99/10]
 gi|256160029|ref|ZP_05457727.1| DNA repair protein RadC [Brucella ceti M490/95/1]
 gi|256255238|ref|ZP_05460774.1| DNA repair protein RadC [Brucella ceti B1/94]
 gi|261222434|ref|ZP_05936715.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261314006|ref|ZP_05953203.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|265998402|ref|ZP_06110959.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|148371339|gb|ABQ61318.1| DNA repair protein RadC [Brucella ovis ATCC 25840]
 gi|260921018|gb|EEX87671.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261303032|gb|EEY06529.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|262553009|gb|EEZ08860.1| conserved hypothetical protein [Brucella ceti M490/95/1]
          Length = 246

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/92 (65%), Positives = 71/92 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 153 LFLDKKNKLIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           +MT+ ++     LNI VHDH+IIGK    S +
Sbjct: 213 DMTKQLVNAAKALNITVHDHVIIGKHGHASLR 244


>gi|110807685|ref|YP_691205.1| DNA repair protein RadC [Shigella flexneri 5 str. 8401]
 gi|110617233|gb|ABF05900.1| DNA repair protein [Shigella flexneri 5 str. 8401]
          Length = 209

 Score =  131 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 113 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 172

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 173 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 209


>gi|312963850|ref|ZP_07778321.1| hypothetical protein PFWH6_5769 [Pseudomonas fluorescens WH6]
 gi|311281885|gb|EFQ60495.1| hypothetical protein PFWH6_5769 [Pseudomonas fluorescens WH6]
          Length = 224

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E  S+GTID   VY R++V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDSRHRVLGFEALSQGTIDTALVYPRQVVKRALAYNAAALILCHNHPSGVAQPSAADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +   L  +++ V DHII+G    +S      +
Sbjct: 188 KMTKTLQKALEVVDVRVLDHIIVGDGDPLSMAEYGWM 224


>gi|292486566|ref|YP_003529434.1| glutaredoxin 3 [Erwinia amylovora CFBP1430]
 gi|292897804|ref|YP_003537173.1| DNA repair protein [Erwinia amylovora ATCC 49946]
 gi|291197652|emb|CBJ44747.1| DNA repair protein [Erwinia amylovora ATCC 49946]
 gi|291551981|emb|CBA19018.1| Glutaredoxin 3 [Erwinia amylovora CFBP1430]
 gi|312170627|emb|CBX78890.1| Glutaredoxin 3 [Erwinia amylovora ATCC BAA-2158]
          Length = 223

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F D  + +I       GT++ V V+ REIV+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 127 IFFDNQHRVIHTSEMFSGTLNSVEVHPREIVREALKRNAAALILAHNHPSGLAEPSRADR 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I+   + +NI V DH++IG+  +VSF     +
Sbjct: 187 DITLQIVRACSLMNIRVLDHMVIGRGEYVSFAERGWM 223


>gi|311069296|ref|YP_003974219.1| DNA repair protein RadC [Bacillus atrophaeus 1942]
 gi|310869813|gb|ADP33288.1| DNA repair protein RadC [Bacillus atrophaeus 1942]
          Length = 231

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G+++   V+ RE+ +   + SA S I +HNHPSG+P PS  DI
Sbjct: 135 LYLNTKNEVIHKRTIFIGSLNSSIVHPREVFKEAFKRSAASFICIHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    N + I + DH++IG   FVS K    +
Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231


>gi|209917488|ref|YP_002291572.1| hypothetical protein ECSE_0297 [Escherichia coli SE11]
 gi|209910747|dbj|BAG75821.1| hypothetical phage protein [Escherichia coli SE11]
          Length = 180

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    G+I+HV V+ RE+V+  L  +A +++L HNHPSG+P PS  D 
Sbjct: 84  LYLDNQHRLLESETLFAGSINHVQVHPREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDR 143

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +   L  +++   DH++IG D  VSF     I
Sbjct: 144 NITGRLKEALALVDVNTLDHLVIGSDGIVSFAERGWI 180


>gi|317494719|ref|ZP_07953131.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917321|gb|EFV38668.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 228

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTI+ V VY REIV+  L+++A ++IL HNHPSG   PS AD 
Sbjct: 132 LFLDNQHRVIRSEEMFSGTINCVDVYPREIVRGALKVNAVALILAHNHPSGIAEPSAADR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L+I V DH++IG    VSF     +
Sbjct: 192 VLTERVVKACALLDIRVLDHMVIGHGQSVSFAERGWL 228


>gi|28867326|ref|NP_789945.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213970685|ref|ZP_03398810.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato T1]
 gi|301382572|ref|ZP_07230990.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato Max13]
 gi|302063061|ref|ZP_07254602.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato K40]
 gi|302133591|ref|ZP_07259581.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|37999601|sp|Q88BD1|Y086_PSESM RecName: Full=UPF0758 protein PSPTO_0086
 gi|28850560|gb|AAO53640.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213924519|gb|EEB58089.1| DNA repair protein RadC [Pseudomonas syringae pv. tomato T1]
 gi|331018553|gb|EGH98609.1| hypothetical protein PLA106_21168 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 224

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R L  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRALAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ V DH+I+G    +S     ++
Sbjct: 188 DLTKRLKEALKLVDVHVLDHVIVGDGEPLSMVEKGLM 224


>gi|227550362|ref|ZP_03980411.1| DNA repair protein RadC [Enterococcus faecium TX1330]
 gi|227180501|gb|EEI61473.1| DNA repair protein RadC [Enterococcus faecium TX1330]
          Length = 225

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G+++    + REI    +   A  I+L HNHPSGN  PS  D+
Sbjct: 126 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N T+ I      + I V DH+IIG+  + S +   ++
Sbjct: 186 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGLM 222


>gi|166713831|ref|ZP_02245038.1| DNA repair protein RadC [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 225

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFMDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++ +L  ++I + DH +IG    VS      +
Sbjct: 188 AVTKRLLDSLELVDIRLLDHFVIGDGRPVSLAERGWL 224


>gi|260576196|ref|ZP_05844189.1| DNA repair protein RadC [Rhodobacter sp. SW2]
 gi|259021676|gb|EEW24979.1| DNA repair protein RadC [Rhodobacter sp. SW2]
          Length = 256

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q++GT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS+ADI
Sbjct: 160 LFLDRKNVLIADEAQAKGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSEADI 219

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I      L I ++DH+IIGKD  +SF+    +
Sbjct: 220 SVTMQIQDAAATLGITLYDHLIIGKDRELSFRAQGYL 256


>gi|257885023|ref|ZP_05664676.1| DNA repair protein RadC [Enterococcus faecium 1,231,501]
 gi|257890249|ref|ZP_05669902.1| DNA repair protein RadC [Enterococcus faecium 1,231,410]
 gi|258616808|ref|ZP_05714578.1| DNA repair protein RadC [Enterococcus faecium DO]
 gi|260559754|ref|ZP_05831934.1| DNA repair protein RadC [Enterococcus faecium C68]
 gi|293559749|ref|ZP_06676270.1| DNA repair protein RadC [Enterococcus faecium E1162]
 gi|293567615|ref|ZP_06678959.1| DNA repair protein RadC [Enterococcus faecium E1071]
 gi|257820875|gb|EEV48009.1| DNA repair protein RadC [Enterococcus faecium 1,231,501]
 gi|257826609|gb|EEV53235.1| DNA repair protein RadC [Enterococcus faecium 1,231,410]
 gi|260074422|gb|EEW62744.1| DNA repair protein RadC [Enterococcus faecium C68]
 gi|291589716|gb|EFF21520.1| DNA repair protein RadC [Enterococcus faecium E1071]
 gi|291606297|gb|EFF35710.1| DNA repair protein RadC [Enterococcus faecium E1162]
          Length = 230

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G+++    + REI    +   A  I+L HNHPSGN  PS  D+
Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N T+ I      + I V DH+IIG+  + S +   ++
Sbjct: 191 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 227


>gi|261210081|ref|ZP_05924379.1| DNA repair protein RadC [Vibrio sp. RC341]
 gi|260840846|gb|EEX67388.1| DNA repair protein RadC [Vibrio sp. RC341]
          Length = 157

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157


>gi|325917528|ref|ZP_08179731.1| DNA replication and repair protein RadC [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325536244|gb|EGD08037.1| DNA replication and repair protein RadC [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 243

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 146 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L+ ++I + DH +IG    VS      +
Sbjct: 206 AVTRRLLQGLDLVDIRLLDHFVIGDGRPVSLAERGWL 242


>gi|85708932|ref|ZP_01039998.1| DNA repair protein RadC [Erythrobacter sp. NAP1]
 gi|85690466|gb|EAQ30469.1| DNA repair protein RadC [Erythrobacter sp. NAP1]
          Length = 272

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 64/97 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI D     G+ID   ++ RE+++R +++ A+++ILVHNHPSG+P PS AD+
Sbjct: 176 LYLDAKNRLIDDHHVGDGSIDEAAIHPREVIRRAMDVGASALILVHNHPSGSPEPSRADV 235

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I      L + +HDH+I+G++  VS +   +I
Sbjct: 236 QITQKIAEAGRLLGVTLHDHVIVGREGHVSLRAKGLI 272


>gi|118577341|ref|YP_899581.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
 gi|118504846|gb|ABL01328.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
          Length = 168

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++  +  S G+++   V+ RE+ +  L  +A +II VH HPSG+PNPS  D+
Sbjct: 72  LHLDGKNRIMCMDRVSIGSLNQSIVHPREVFKTALLSNAAAIICVHQHPSGDPNPSSEDL 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I V DHI++G + ++SF    ++
Sbjct: 132 SITKRLKEAGEIMGIRVLDHIVVGHEDYISFVEKGLM 168


>gi|71899272|ref|ZP_00681434.1| DNA repair protein RadC [Xylella fastidiosa Ann-1]
 gi|71731005|gb|EAO33074.1| DNA repair protein RadC [Xylella fastidiosa Ann-1]
          Length = 242

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  I+ E    GTI+   V+ RE+V+R L L+A ++I+ HNHPSGN  PS AD 
Sbjct: 146 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADQ 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ +++ + DH +IG  A VSF     +
Sbjct: 206 MITQRLKNALDLIDVRLVDHFVIGDGAPVSFAEHGWL 242


>gi|261820014|ref|YP_003258120.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163]
 gi|261604027|gb|ACX86513.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163]
          Length = 158

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N LI+ E    GTI+ V V+  E+ ++ + L+A ++I  HNHPSGN  PS+AD 
Sbjct: 62  LFLNNQNRLISCEFLFAGTINSVEVHPGEVARQAIRLNAAAVIFAHNHPSGNAEPSNADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L+ + I V DH+++G    VSF     +
Sbjct: 122 KITEKLVNALSLIEIRVLDHVVVGHGEIVSFAERGWL 158


>gi|261405382|ref|YP_003241623.1| DNA repair protein RadC [Paenibacillus sp. Y412MC10]
 gi|329928472|ref|ZP_08282340.1| DNA repair protein RadC [Paenibacillus sp. HGF5]
 gi|261281845|gb|ACX63816.1| DNA repair protein RadC [Paenibacillus sp. Y412MC10]
 gi|328937731|gb|EGG34139.1| DNA repair protein RadC [Paenibacillus sp. HGF5]
          Length = 229

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +IA E  S G+++   V+ RE+ +  ++ S+ S++  HNHPSG+P PS  DI
Sbjct: 133 VFLNTKNHVIAQETLSMGSLNASIVHPREVFRAAIKCSSASLVCAHNHPSGDPTPSPEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  ++     + I V DH+IIG  +FVS K   ++
Sbjct: 193 SLTARLVEAGQIVGIDVLDHLIIGDGSFVSLKERGLM 229


>gi|257899232|ref|ZP_05678885.1| DNA repair protein RadC [Enterococcus faecium Com15]
 gi|257837144|gb|EEV62218.1| DNA repair protein RadC [Enterococcus faecium Com15]
          Length = 230

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G+++    + REI    +   A  I+L HNHPSGN  PS  D+
Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N T+ I      + I V DH+IIG+  + S +   ++
Sbjct: 191 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGLM 227


>gi|134093935|ref|YP_001099010.1| putative DNA repair protein; putative CP4-6 prophage [Herminiimonas
           arsenicoxydans]
 gi|133737838|emb|CAL60883.1| putative DNA repair protein RadC [Herminiimonas arsenicoxydans]
          Length = 175

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  N +IA E    GTI    VY R IVQR + L+A S+IL HNHPSG+  PSDAD 
Sbjct: 78  VFMDTQNRVIAYEPLFFGTIHQTSVYPRVIVQRAMSLNAASMILAHNHPSGSTQPSDADK 137

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  + + L  +++ V DH IIG++   SF    ++
Sbjct: 138 QLTNRLKSLLESIDVRVLDHFIIGEEGTFSFAEHGLL 174


>gi|238796699|ref|ZP_04640205.1| DNA repair protein RadC [Yersinia mollaretii ATCC 43969]
 gi|238719430|gb|EEQ11240.1| DNA repair protein RadC [Yersinia mollaretii ATCC 43969]
          Length = 161

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+A E    G+I    V+ RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 63  LYLDNQHRLLACETLFTGSIRSTEVHPREVVKAALRHNAAAVILAHNHPSGEAEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++  L  +++ V DH+I+G    VSF     +
Sbjct: 123 QITDRLVNALALVDVKVLDHLIVGGLDIVSFTERGWL 159


>gi|229512565|ref|ZP_04402036.1| DNA repair protein RadC [Vibrio cholerae TMA 21]
 gi|229350458|gb|EEO15407.1| DNA repair protein RadC [Vibrio cholerae TMA 21]
          Length = 157

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFQGTVDAASVYPREVVKTVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDICTSFAERGWL 157


>gi|163733013|ref|ZP_02140457.1| DNA repair protein RadC [Roseobacter litoralis Och 149]
 gi|161393548|gb|EDQ17873.1| DNA repair protein RadC [Roseobacter litoralis Och 149]
          Length = 253

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/97 (53%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N +IADE Q++GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS +DI
Sbjct: 157 LFLDRKNTVIADEEQAKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQSDI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  I      L + +HDH+IIGK   +SF+    +
Sbjct: 217 SMTDQINAACQTLGLTLHDHLIIGKSTELSFRAEGYL 253


>gi|315641420|ref|ZP_07896493.1| DNA repair protein RadC [Enterococcus italicus DSM 15952]
 gi|315482807|gb|EFU73330.1| DNA repair protein RadC [Enterococcus italicus DSM 15952]
          Length = 226

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 52/96 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  E    G+++    + REI +  + +SA  IIL HNHPSGNP PS  D+
Sbjct: 129 LYLNTKNEIIKKETLFIGSLNQSVAHPREIFKGAVRVSAARIILTHNHPSGNPKPSSHDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I V DH+IIG   +VS +    
Sbjct: 189 QFTKRVKECGEMMGIEVLDHLIIGTRRYVSLREEGF 224


>gi|253998052|ref|YP_003050115.1| DNA repair protein RadC [Methylovorus sp. SIP3-4]
 gi|253984731|gb|ACT49588.1| DNA repair protein RadC [Methylovorus sp. SIP3-4]
          Length = 224

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++A E    GT+    V+ REIV+R L  +A ++IL HNHPSG   PS +D 
Sbjct: 128 IFLDAQNRVLAHEEMFAGTLTQTSVHPREIVKRALYYNAGAVILAHNHPSGVAEPSRSDE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  + T L+ +++ V DH ++  +  +SF    ++
Sbjct: 188 MITAQLKTALDLVDVRVLDHFVVAGNTTLSFAERGLL 224


>gi|260220445|emb|CBA27989.1| DNA repair protein radC homolog [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 239

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V R L   A +++L HNHPSG+  PS AD 
Sbjct: 143 LFLDSQNKLLAMEELFRGTLTQTSVYPREVVIRALHHGAAAVVLAHNHPSGSVQPSRADE 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHII+G    +S     +I
Sbjct: 203 ALTQTLKAALALVDVRVLDHIIVGPGQALSMAETGLI 239


>gi|296136107|ref|YP_003643349.1| DNA repair protein RadC [Thiomonas intermedia K12]
 gi|295796229|gb|ADG31019.1| DNA repair protein RadC [Thiomonas intermedia K12]
          Length = 226

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E  SRGT+    VY RE+V+  L L+A ++IL HNHPSG   PS AD 
Sbjct: 130 LFLDNQHQLIASEELSRGTLASTSVYPREVVKAALRLNAGALILAHNHPSGLAEPSAADR 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH+++ +   VSF    ++
Sbjct: 190 ALTQTLKAALALVDVRVLDHLVVTRHNVVSFAERGLL 226


>gi|71275890|ref|ZP_00652173.1| DNA repair protein RadC [Xylella fastidiosa Dixon]
 gi|71901383|ref|ZP_00683476.1| DNA repair protein RadC [Xylella fastidiosa Ann-1]
 gi|170729361|ref|YP_001774794.1| DNA repair protein RadC [Xylella fastidiosa M12]
 gi|182680681|ref|YP_001828841.1| DNA repair protein RadC [Xylella fastidiosa M23]
 gi|71163267|gb|EAO12986.1| DNA repair protein RadC [Xylella fastidiosa Dixon]
 gi|71728842|gb|EAO30980.1| DNA repair protein RadC [Xylella fastidiosa Ann-1]
 gi|167964154|gb|ACA11164.1| DNA repair protein [Xylella fastidiosa M12]
 gi|182630791|gb|ACB91567.1| DNA repair protein RadC [Xylella fastidiosa M23]
          Length = 242

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  I+ E    GTI+   V+ RE+V+R L L+A ++I+ HNHPSGN  PS AD 
Sbjct: 146 LFLDNRHRAISFEELFHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADQ 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ +++ + DH +IG  A VSF     +
Sbjct: 206 MITQRLKNALDLIDVRLVDHFVIGDGAPVSFAEHGWL 242


>gi|269103917|ref|ZP_06156614.1| DNA repair protein RadC [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163815|gb|EEZ42311.1| DNA repair protein RadC [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 224

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTID   VY REIV+R LEL+A + IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVICGEALFFGTIDSASVYPREIVKRSLELNAAAAILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I   L  ++I V DH +IG    VSF     +
Sbjct: 188 RITQKISDALALVDIRVLDHFVIGDGELVSFAERGWL 224


>gi|117619575|ref|YP_854693.1| DNA repair protein RadC [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166218772|sp|A0KEM8|Y160_AERHH RecName: Full=UPF0758 protein AHA_0160
 gi|117560982|gb|ABK37930.1| DNA repair protein RadC [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 224

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I       GT+D   V+ REIVQ  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 128 LLLDNQHRVIQFVELFYGTLDSASVWPREIVQIALKHNAAAVILAHNHPSGVAEPSRADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L  ++I V DH++IG    VSF     +
Sbjct: 188 QITDRITAALALIDIRVLDHLVIGDGITVSFAERGWL 224


>gi|69246244|ref|ZP_00603857.1| DNA repair protein RadC [Enterococcus faecium DO]
 gi|68195345|gb|EAN09794.1| DNA repair protein RadC [Enterococcus faecium DO]
          Length = 226

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G+++    + REI    +   A  I+L HNHPSGN  PS  D+
Sbjct: 127 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N T+ I      + I V DH+IIG+  + S +   ++
Sbjct: 187 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 223


>gi|260774791|ref|ZP_05883693.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609216|gb|EEX35371.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450]
          Length = 157

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  + + V DH I+  D+  SF     +
Sbjct: 122 RITERLKDALALVEVRVLDH-IVTGDSCTSFAERGWL 157


>gi|149184792|ref|ZP_01863110.1| hypothetical protein ED21_28778 [Erythrobacter sp. SD-21]
 gi|148832112|gb|EDL50545.1| hypothetical protein ED21_28778 [Erythrobacter sp. SD-21]
          Length = 232

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 65/97 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI D + + G+ID   ++ RE+++R  ++ A+++ILVHNHPSG+P PS ADI
Sbjct: 136 LYLDTRNRLIDDHLAAEGSIDEAAIHPREVIRRAFDVGASALILVHNHPSGDPEPSRADI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      LNI VHDH+I+G+ + VS +   +I
Sbjct: 196 QITARIAEAGRLLNITVHDHVIVGRGSHVSLRAKGLI 232


>gi|95931398|ref|ZP_01314108.1| DNA repair protein RadC [Desulfuromonas acetoxidans DSM 684]
 gi|95132554|gb|EAT14243.1| DNA repair protein RadC [Desulfuromonas acetoxidans DSM 684]
          Length = 233

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+ D   S G++    V+ RE+    +  SA +++ VHNHPSG+P PS  DI
Sbjct: 134 LLLDAKNRLLKDVRISEGSLTASIVHPREVFTAVVRESAAAVLFVHNHPSGDPTPSREDI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +    + L + V DHIIIG D++ S     ++
Sbjct: 194 SITQRLKEAGDLLGVRVLDHIIIGHDSYTSLAEQGLM 230


>gi|323955396|gb|EGB51165.1| DNA repair protein RadC [Escherichia coli H263]
          Length = 98

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 2  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALHHNAAAVVLAHNHPSGEVTPSKADR 61

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 62 LITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 98


>gi|254466524|ref|ZP_05079935.1| DNA repair protein RadC [Rhodobacterales bacterium Y4I]
 gi|206687432|gb|EDZ47914.1| DNA repair protein RadC [Rhodobacterales bacterium Y4I]
          Length = 254

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/97 (58%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q+RGT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PSD+DI
Sbjct: 158 LFLDRKNVLIADEEQARGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSDSDI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I+  L  L I +HDH+IIGK   +SF+   ++
Sbjct: 218 GMTDQILAALTALGITLHDHLIIGKSTELSFRAQGLL 254


>gi|323173231|gb|EFZ58860.1| DNA repair protein radC [Escherichia coli LT-68]
          Length = 214

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 118 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   + + V DHI+IG+  +VSF     I
Sbjct: 178 LITERIIKSCQFMELRVLDHIVIGRGEYVSFAERGWI 214


>gi|323486933|ref|ZP_08092249.1| DNA repair protein RadC [Clostridium symbiosum WAL-14163]
 gi|323691981|ref|ZP_08106230.1| DNA repair protein RadC [Clostridium symbiosum WAL-14673]
 gi|323399796|gb|EGA92178.1| DNA repair protein RadC [Clostridium symbiosum WAL-14163]
 gi|323503990|gb|EGB19803.1| DNA repair protein RadC [Clostridium symbiosum WAL-14673]
          Length = 230

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N+LI D +  RGT++      RE+    L   A  IILVHNHPSG+P+PS  D 
Sbjct: 134 MMLNTKNVLIKDSLIFRGTVNMSVASPREMFIEALRYHAVHIILVHNHPSGDPSPSSEDK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      L I + DHIIIG +++ SFK   II
Sbjct: 194 KLTAQVKEAGALLGIRLLDHIIIGDNSYFSFKERGII 230


>gi|16079856|ref|NP_390682.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310744|ref|ZP_03592591.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221315069|ref|ZP_03596874.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319988|ref|ZP_03601282.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324270|ref|ZP_03605564.1| DNA repair protein RadC [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|321312335|ref|YP_004204622.1| hypothetical protein BSn5_04835 [Bacillus subtilis BSn5]
 gi|400964|sp|Q02170|YSXA_BACSU RecName: Full=UPF0758 protein ysxA
 gi|142854|gb|AAA22396.1| homologous to E. coli radC gene product and to unidentified protein
           from Staphylococcus aureus [Bacillus subtilis]
 gi|143162|gb|AAA22583.1| orfB [Bacillus subtilis]
 gi|2635269|emb|CAB14764.1| putative DNA repair protein [Bacillus subtilis subsp. subtilis str.
           168]
 gi|320018609|gb|ADV93595.1| hypothetical protein BSn5_04835 [Bacillus subtilis BSn5]
          Length = 231

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G+++   V+ RE+ +   + SA S I VHNHPSG+P PS  DI
Sbjct: 135 LYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    N + I + DH++IG   FVS K    +
Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231


>gi|325577760|ref|ZP_08148035.1| DNA repair protein RadC [Haemophilus parainfluenzae ATCC 33392]
 gi|325160505|gb|EGC72631.1| DNA repair protein RadC [Haemophilus parainfluenzae ATCC 33392]
          Length = 221

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVTNVYPREIIKESLSCNAAALILAHNHPSGLAEPSYSDK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ II     ++I + DH I+GK    SF    ++
Sbjct: 185 MITQKIIEAAELMDIRILDHFIVGKGTCYSFAEHNLL 221


>gi|84387383|ref|ZP_00990403.1| DNA repair protein [Vibrio splendidus 12B01]
 gi|84377832|gb|EAP94695.1| DNA repair protein [Vibrio splendidus 12B01]
          Length = 156

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + LI  E   +GTID   VY RE+V+  L+ +A ++I  HNHPSG+  PS AD 
Sbjct: 61  MLLDNQHRLIEFEELFQGTIDAASVYPREVVKTALKANAAAVIFAHNHPSGDSAPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DHI++G +   SF     +
Sbjct: 121 RITTRLQDALALIDVRVLDHIVVG-EQCTSFAERGWL 156


>gi|170766630|ref|ZP_02901083.1| DNA repair protein RadC [Escherichia albertii TW07627]
 gi|170124068|gb|EDS92999.1| DNA repair protein RadC [Escherichia albertii TW07627]
          Length = 250

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++       GT++HV V+ REIV+  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVLTHSRLFSGTLNHVEVHPREIVREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   + + V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMELRVLDHIVIGRGEYVSFAERGWI 222


>gi|325919704|ref|ZP_08181706.1| DNA replication and repair protein RadC [Xanthomonas gardneri ATCC
           19865]
 gi|325549812|gb|EGD20664.1| DNA replication and repair protein RadC [Xanthomonas gardneri ATCC
           19865]
          Length = 225

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  +  IA E    GT+D   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LYLDTKHHAIAFEELFTGTLDGADIHTREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L+ + I + DH +IG    VS      +
Sbjct: 188 AVTKRLLEALDLVEIRLLDHFVIGDGRPVSLAERGWL 224


>gi|254516157|ref|ZP_05128217.1| DNA repair protein RadC [gamma proteobacterium NOR5-3]
 gi|219675879|gb|EED32245.1| DNA repair protein RadC [gamma proteobacterium NOR5-3]
          Length = 132

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGTID   VY R +V+R LEL+A ++IL HNHPSG PNPS AD 
Sbjct: 36  LFLDSQHRLIAFERLFRGTIDGASVYPRVVVKRALELNAAALILTHNHPSGLPNPSSADS 95

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  ++I V DHI++G +   S     ++
Sbjct: 96  KITQRLQDALALVDIRVLDHIVVGVEGTQSMAERGLL 132


>gi|156936681|ref|YP_001436032.1| DNA repair protein RadC [Vibrio harveyi ATCC BAA-1116]
 gi|156529928|gb|ABU75012.1| hypothetical protein VIBHAR_p08165 [Vibrio harveyi ATCC BAA-1116]
          Length = 305

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + + + E    GT++   VY RE+V++ L  +A+++I  HNHPSG   PS AD 
Sbjct: 209 IFLDNQHRVRSSEDLFTGTVNAASVYPREVVKKALAENASAVIFYHNHPSGVAEPSQADR 268

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I  L  +++ V DH ++  +  VSF     I
Sbjct: 269 RITRRLIDALALIDVKVLDHFVVSFEGTVSFAERGWI 305


>gi|229032108|ref|ZP_04188086.1| DNA repair protein radC [Bacillus cereus AH1271]
 gi|228729198|gb|EEL80196.1| DNA repair protein radC [Bacillus cereus AH1271]
          Length = 240

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 144 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 203

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 204 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 240


>gi|138896185|ref|YP_001126638.1| DNA repair protein RadC [Geobacillus thermodenitrificans NG80-2]
 gi|196250140|ref|ZP_03148834.1| DNA repair protein RadC [Geobacillus sp. G11MC16]
 gi|166218780|sp|A4IRD9|Y2548_GEOTN RecName: Full=UPF0758 protein GTNG_2548
 gi|134267698|gb|ABO67893.1| DNA repair protein [Geobacillus thermodenitrificans NG80-2]
 gi|196210324|gb|EDY05089.1| DNA repair protein RadC [Geobacillus sp. G11MC16]
          Length = 226

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +    G+++   V+ RE+ +  ++ SA S+I VHNHPSG+P PS  DI
Sbjct: 130 IYLNTKNQVIHRKTVFIGSLNASIVHPREVFKEAIKRSAASVICVHNHPSGDPTPSREDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DH+IIG   F+S K    +
Sbjct: 190 DVTKRLAECGRIIGIELLDHLIIGDQKFISLKEKGYV 226


>gi|82776320|ref|YP_402669.1| putative radC-like protein yeeS [Shigella dysenteriae Sd197]
 gi|309786791|ref|ZP_07681411.1| DNA repair RadC family protein [Shigella dysenteriae 1617]
 gi|81240468|gb|ABB61178.1| Putative radC-like protein yeeS [Shigella dysenteriae Sd197]
 gi|308925484|gb|EFP70971.1| DNA repair RadC family protein [Shigella dysenteriae 1617]
          Length = 150

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 54  LYLNNQNQLIAGEPLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVIPSKADR 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 114 LITERLVQALGLVDIRVPDHLIVGSSQVFSFAEHGLL 150


>gi|148261604|ref|YP_001235731.1| DNA repair protein RadC [Acidiphilium cryptum JF-5]
 gi|146403285|gb|ABQ31812.1| DNA repair protein RadC [Acidiphilium cryptum JF-5]
          Length = 246

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 48/97 (49%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N L+ADEV SRGT++H  VY+RE+V+R +E  AT++ILVHNHPSG+P+PS  D+
Sbjct: 145 IYLDNRNRLLADEVASRGTVNHTQVYVREVVRRAIETRATALILVHNHPSGDPSPSRDDV 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +   +  L+I +HDH+IIGK  ++SF+    +
Sbjct: 205 EMTREVQRAVALLDITLHDHVIIGKAGWLSFRREGFL 241


>gi|238853957|ref|ZP_04644314.1| DNA repair protein [Lactobacillus gasseri 202-4]
 gi|282851637|ref|ZP_06261002.1| DNA repair protein RadC [Lactobacillus gasseri 224-1]
 gi|238833402|gb|EEQ25682.1| DNA repair protein [Lactobacillus gasseri 202-4]
 gi|282557605|gb|EFB63202.1| DNA repair protein RadC [Lactobacillus gasseri 224-1]
          Length = 203

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +IA+++  +GT++    + R+I +  +  ++T+  + HNHPSG+  PS  D+
Sbjct: 107 IYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDL 166

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ ++     + I   DH I+  + ++SF+ + ++
Sbjct: 167 RFTKKLVEASKCMGIDFLDHFIVTDNTYLSFREMELL 203


>gi|114704379|ref|ZP_01437287.1| DNA repair protein RadC [Fulvimarina pelagi HTCC2506]
 gi|114539164|gb|EAU42284.1| DNA repair protein RadC [Fulvimarina pelagi HTCC2506]
          Length = 252

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/97 (64%), Positives = 78/97 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY RE+V+R LEL+AT++ILVHNHPSG+P PS ADI
Sbjct: 156 LFLDKKNALIADEVQGRGTVDHTPVYPREVVRRALELNATALILVHNHPSGDPTPSRADI 215

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I TT  PL I +HDH+I+GK+   S +GL++I
Sbjct: 216 EMTRMIETTAKPLGISLHDHVIVGKNGHASLRGLKLI 252


>gi|323339483|ref|ZP_08079762.1| DNA repair protein RadC [Lactobacillus ruminis ATCC 25644]
 gi|323093097|gb|EFZ35690.1| DNA repair protein RadC [Lactobacillus ruminis ATCC 25644]
          Length = 224

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 59/96 (61%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FLD  N ++  +   +GT++   V+ REI +  L LS   II+VHNHPSG+  PS+ D++
Sbjct: 128 FLDTKNQVLEQKKIFKGTLNSATVHPREIFKEALRLSTARIIVVHNHPSGDTTPSENDLS 187

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ +    + L I + DHII+G  +++S +   II
Sbjct: 188 LTKRLEECGHLLGIELLDHIIVGNSSYLSMREENII 223


>gi|158425828|ref|YP_001527120.1| DNA repair protein RadC [Azorhizobium caulinodans ORS 571]
 gi|158332717|dbj|BAF90202.1| DNA repair protein [Azorhizobium caulinodans ORS 571]
          Length = 234

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 62/97 (63%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEV   GT+DH PVY RE+V+R LELSA+++IL HNHPSG+P PS ADI
Sbjct: 138 LFLDKRNQLIADEVVQTGTVDHAPVYPREVVKRALELSASALILCHNHPSGDPTPSRADI 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ II    PL I +HDHII+GK+   S KGLR+I
Sbjct: 198 DMTRKIIDVAKPLGIELHDHIIVGKEGHASLKGLRLI 234


>gi|56421153|ref|YP_148471.1| DNA repair protein RadC [Geobacillus kaustophilus HTA426]
 gi|73913735|sp|Q5KWN3|Y2618_GEOKA RecName: Full=UPF0758 protein GK2618
 gi|56380995|dbj|BAD76903.1| DNA repair protein [Geobacillus kaustophilus HTA426]
          Length = 226

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +    G+++   V+ RE+ +  ++ SA S+I VHNHPSG+P PS  DI
Sbjct: 130 IYLNTKNQVIYRKTVFIGSLNASIVHPREVFKEAIKRSAASVICVHNHPSGDPTPSREDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DH+IIG   F+S K    +
Sbjct: 190 DVTKRLAECGRIIGIELLDHLIIGDQKFISLKEKGYV 226


>gi|319897558|ref|YP_004135755.1| DNA repair protein radc homolog [Haemophilus influenzae F3031]
 gi|88930441|sp|Q4QLV5|Y1125_HAEI8 RecName: Full=UPF0758 protein NTHI1125
 gi|317433064|emb|CBY81438.1| DNA repair protein RadC homolog [Haemophilus influenzae F3031]
          Length = 221

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 185 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 221


>gi|301021305|ref|ZP_07185334.1| putative DNA repair protein RadC [Escherichia coli MS 69-1]
 gi|300398156|gb|EFJ81694.1| putative DNA repair protein RadC [Escherichia coli MS 69-1]
          Length = 157

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+  E    GTI+   V+ REIV+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVTEPSRADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T NI+ TL+ + + V DH IIG    +SF     +
Sbjct: 121 LITTNIVKTLDLVKVRVLDHFIIGAGDVLSFAERGWL 157


>gi|206969519|ref|ZP_03230473.1| DNA repair protein RadC [Bacillus cereus AH1134]
 gi|228941621|ref|ZP_04104168.1| DNA repair protein radC [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228954737|ref|ZP_04116759.1| DNA repair protein radC [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228974550|ref|ZP_04135116.1| DNA repair protein radC [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981145|ref|ZP_04141445.1| DNA repair protein radC [Bacillus thuringiensis Bt407]
 gi|229071963|ref|ZP_04205173.1| DNA repair protein radC [Bacillus cereus F65185]
 gi|229081719|ref|ZP_04214212.1| DNA repair protein radC [Bacillus cereus Rock4-2]
 gi|229180730|ref|ZP_04308068.1| DNA repair protein radC [Bacillus cereus 172560W]
 gi|229192665|ref|ZP_04319624.1| DNA repair protein radC [Bacillus cereus ATCC 10876]
 gi|206735207|gb|EDZ52375.1| DNA repair protein RadC [Bacillus cereus AH1134]
 gi|228590755|gb|EEK48615.1| DNA repair protein radC [Bacillus cereus ATCC 10876]
 gi|228602708|gb|EEK60191.1| DNA repair protein radC [Bacillus cereus 172560W]
 gi|228701564|gb|EEL54057.1| DNA repair protein radC [Bacillus cereus Rock4-2]
 gi|228711122|gb|EEL63087.1| DNA repair protein radC [Bacillus cereus F65185]
 gi|228778345|gb|EEM26612.1| DNA repair protein radC [Bacillus thuringiensis Bt407]
 gi|228784953|gb|EEM32966.1| DNA repair protein radC [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228804935|gb|EEM51532.1| DNA repair protein radC [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228817833|gb|EEM63911.1| DNA repair protein radC [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942233|gb|AEA18129.1| DNA repair protein radC [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 225

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|301631360|ref|XP_002944759.1| PREDICTED: UPF0758 protein Veis_1654-like [Xenopus (Silurana)
           tropicalis]
          Length = 225

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+VQR L   AT+++L HNHPSG+  PS AD 
Sbjct: 129 LFLDSQNRLLAMEELFRGTLTQTSVYPREVVQRALHHQATAVVLAHNHPSGSVQPSRADE 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH+I+     +S     ++
Sbjct: 189 ALTQTLKAALALIDVRVLDHVIVAPGQALSMAEQGLV 225


>gi|34498534|ref|NP_902749.1| DNA repair protein RadC [Chromobacterium violaceum ATCC 12472]
 gi|81654991|sp|Q7NTH5|Y3079_CHRVO RecName: Full=UPF0758 protein CV_3079
 gi|34104390|gb|AAQ60748.1| DNA repair protein RadC [Chromobacterium violaceum ATCC 12472]
          Length = 224

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL   N LI  E   +GT+    VY RE+++R L  +A ++I+ HNHPSG   PS AD 
Sbjct: 128 IFLSAQNRLIEVEEVFKGTLTETRVYPREVLRRALRHNAAALIIAHNHPSGVSEPSSADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  ++I + DH ++      SF     +
Sbjct: 188 VLTDTLKRALELVDIRLLDHFVVTGGHAESFAERGWL 224


>gi|331650414|ref|ZP_08351486.1| putative DNA repair protein [Escherichia coli M605]
 gi|331040808|gb|EGI12966.1| putative DNA repair protein [Escherichia coli M605]
          Length = 157

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+  E    GTI+   V+ REIV+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQNRLLKHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T NI+ TL+ + + V DH IIG    +SF     +
Sbjct: 121 LITTNIVKTLDLVKVRVLDHFIIGAGDVLSFAERGWL 157


>gi|253702454|ref|YP_003023643.1| DNA repair protein RadC [Geobacter sp. M21]
 gi|251777304|gb|ACT19885.1| DNA repair protein RadC [Geobacter sp. M21]
          Length = 231

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I+    S G+++   V+ RE+    +  SA ++IL+HNHP+G+P PS  D+
Sbjct: 135 LLLDGKNRIISRAQISEGSLNQSIVHPREVFNVAVRNSAAAMILLHNHPTGDPAPSPEDM 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I V DHIIIG++ F SF     +
Sbjct: 195 EVTRRLCEAGQLLGIRVLDHIIIGENEFYSFAEHGRL 231


>gi|291485217|dbj|BAI86292.1| DNA repair protein RadC [Bacillus subtilis subsp. natto BEST195]
          Length = 231

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G+++   V+ RE+ +   + SA S I VHNHPSG+P PS  DI
Sbjct: 135 LYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    N + I + DH++IG   FVS K    +
Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231


>gi|296331651|ref|ZP_06874120.1| DNA repair protein RadC [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675390|ref|YP_003867062.1| putative DNA repair protein [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296151246|gb|EFG92126.1| DNA repair protein RadC [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413634|gb|ADM38753.1| putative DNA repair protein [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 231

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G+++   V+ RE+ +   + SA S I VHNHPSG+P PS  DI
Sbjct: 135 LYLNTKNQVIHKRTVFIGSLNSSIVHPREVFKEAFKRSAASFICVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    N + I + DH++IG   FVS K    +
Sbjct: 195 EVTRRLFECGNLIGIELLDHLVIGDKKFVSLKEKGYL 231


>gi|317050107|ref|YP_004117755.1| DNA repair protein RadC [Pantoea sp. At-9b]
 gi|316951724|gb|ADU71199.1| DNA repair protein RadC [Pantoea sp. At-9b]
          Length = 218

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  +    G+I+ V V+ REIV+  L+L+A ++IL HNHPSG   PS AD 
Sbjct: 122 LFLDNQHHVLQAQKMFSGSINSVEVHPREIVREALKLNAAAVILAHNHPSGVAEPSRADR 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I    + +NI + DH++IG   F SF     +
Sbjct: 182 EITDKISKACSLMNIRLLDHLVIGHGEFTSFAERGWL 218


>gi|319783917|ref|YP_004143393.1| DNA repair protein RadC [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169805|gb|ADV13343.1| DNA repair protein RadC [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 253

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 64/97 (65%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+++R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 157 LFLDKKNALIADEVQQTGTVDHTPVYPREVIKRALELSATAIILVHNHPSGDPTPSRADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II     L I VHDHIIIG+  + S KGL +I
Sbjct: 217 EMTKEIIDAGKRLGIAVHDHIIIGRKGYASMKGLLLI 253


>gi|110680841|ref|YP_683848.1| DNA repair protein RadC [Roseobacter denitrificans OCh 114]
 gi|109456957|gb|ABG33162.1| DNA repair protein RadC [Roseobacter denitrificans OCh 114]
          Length = 301

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/97 (53%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N++IADE Q++GT+DHVPVY RE+ +R LEL+A++IILVHNHPSG+P+PS  DI
Sbjct: 204 LFLDRKNVIIADEEQAKGTVDHVPVYPREVAKRALELNASAIILVHNHPSGDPSPSTQDI 263

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  + +    + + +HDH+IIGK+   SFK    +
Sbjct: 264 TMTDQVSSACLAIGVTIHDHVIIGKEREFSFKEGGYL 300


>gi|294501407|ref|YP_003565107.1| DNA repair protein RadC [Bacillus megaterium QM B1551]
 gi|295706755|ref|YP_003599830.1| DNA repair protein RadC [Bacillus megaterium DSM 319]
 gi|294351344|gb|ADE71673.1| DNA repair protein RadC [Bacillus megaterium QM B1551]
 gi|294804414|gb|ADF41480.1| DNA repair protein RadC [Bacillus megaterium DSM 319]
          Length = 228

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +    G+++   V+ RE+ +     SA S+I +HNHPSG+P PS  DI
Sbjct: 132 LYLNTKNQVLHKQTIFIGSLNSSIVHPREVFKEAFRRSAASLICIHNHPSGDPTPSREDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I + DH+IIG   ++S K    +
Sbjct: 192 EVTKRLKECGFIIGIELLDHLIIGDRKYISLKEKGYM 228


>gi|294340312|emb|CAZ88693.1| DNA repair protein radC [Thiomonas sp. 3As]
          Length = 226

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E  SRGT+    VY RE+V+  L L+A ++IL HNHPSG   PS AD 
Sbjct: 130 LFLDSQHQLIASEELSRGTLASTSVYPREVVKAALRLNAGALILAHNHPSGLAEPSAADR 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + + L  +++ V DH+++ + + VSF    ++
Sbjct: 190 ALTQTLKSALALVDVRVLDHLVVTRHSVVSFAERGLL 226


>gi|83941929|ref|ZP_00954391.1| DNA repair protein RadC [Sulfitobacter sp. EE-36]
 gi|83847749|gb|EAP85624.1| DNA repair protein RadC [Sulfitobacter sp. EE-36]
          Length = 253

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/97 (52%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD+ N++I DE Q +GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 157 IYLDRKNVVIGDEEQGKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MTQ I    + L + +HDH+IIGK   +SF+    +
Sbjct: 217 DMTQQIFAACSALGLTLHDHLIIGKSRELSFRSEGYL 253


>gi|330824402|ref|YP_004387705.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
 gi|329309774|gb|AEB84189.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
          Length = 164

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   +GT+D   VY R +VQR L L+A+++IL H HPSGN  PS AD 
Sbjct: 68  VFLDNQHQVLAFEPLFKGTVDQTSVYPRVVVQRALALNASALILAHQHPSGNTEPSAADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + + L  ++  V DH I+GK +  SF    ++
Sbjct: 128 AITERLKSALATVDARVLDHFIVGKGSPYSFAEAGLL 164


>gi|218709645|ref|YP_002417266.1| putative DNA repair protein; prophage protein [Vibrio splendidus
           LGP32]
 gi|218322664|emb|CAV18840.1| putative DNA repair protein; prophage protein [Vibrio splendidus
           LGP32]
          Length = 156

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + LI  E   +GTID   VY RE+V+  L+ +A ++I  HNHPSG+  PS AD 
Sbjct: 61  MLLDNQHRLIEFEELFQGTIDAASVYPREVVKTALKANAAAVIFAHNHPSGDSAPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DH+++G +   SF     +
Sbjct: 121 RITTRLQDALALIDVRVLDHVVVG-EQCTSFAERGWL 156


>gi|188025517|ref|ZP_02997537.1| hypothetical protein PROSTU_00686 [Providencia stuartii ATCC 25827]
 gi|188025584|ref|ZP_02997572.1| hypothetical protein PROSTU_00936 [Providencia stuartii ATCC 25827]
 gi|282600132|ref|ZP_05973133.2| DNA repair protein RadC [Providencia rustigianii DSM 4541]
 gi|188022915|gb|EDU60955.1| hypothetical protein PROSTU_00936 [Providencia stuartii ATCC 25827]
 gi|188023263|gb|EDU61303.1| hypothetical protein PROSTU_00686 [Providencia stuartii ATCC 25827]
 gi|282566538|gb|EFB72073.1| DNA repair protein RadC [Providencia rustigianii DSM 4541]
          Length = 166

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LI+ E    G+I    VY RE+V+R L  +A ++I  HNHPSG+  PS AD 
Sbjct: 70  LYLNQQNQLISSETLFAGSISSTQVYPREVVKRALHFNAAAVIFAHNHPSGDITPSQADK 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +I  L  + + V DH+IIG     SF    ++
Sbjct: 130 SITQQLIKALQLIEVRVLDHLIIGGQQIFSFAEHGLV 166


>gi|262151185|ref|ZP_06028323.1| DNA repair protein RadC [Vibrio cholerae INDRE 91/1]
 gi|220897838|dbj|BAH11100.1| DNA repair protein RadC-related protein [Vibrio cholerae O1 biovar
           El tor]
 gi|262031016|gb|EEY49642.1| DNA repair protein RadC [Vibrio cholerae INDRE 91/1]
          Length = 157

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157


>gi|329891298|ref|ZP_08269641.1| DNA repair protein RadC family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328846599|gb|EGF96163.1| DNA repair protein RadC family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 243

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LDK N LI DE+Q+RGT+DH PVY RE+V+R LELSA+++I+VHNHPSG+P PS ADI
Sbjct: 147 LYLDKKNQLILDEIQNRGTVDHAPVYPREVVRRALELSASAMIIVHNHPSGDPTPSRADI 206

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ +I     L++ VHDH+I+G++   SFK L ++
Sbjct: 207 DMTKQVIEAARALSVQVHDHLIVGREGVASFKQLGLM 243


>gi|160914215|ref|ZP_02076436.1| hypothetical protein EUBDOL_00225 [Eubacterium dolichum DSM 3991]
 gi|158433842|gb|EDP12131.1| hypothetical protein EUBDOL_00225 [Eubacterium dolichum DSM 3991]
          Length = 227

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N ++A +    GT+    V+ REI +  + +    II  HNHPSGNP  SDADI
Sbjct: 128 VFLNQRNQILAYKTLFVGTLTSANVHPREIFKEAMRIGCAKIICAHNHPSGNPQVSDADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I+     ++I + DHI++G + +VS +    +
Sbjct: 188 AITQQIMECGQLVSIPLLDHIVVGGNRYVSLREEGYM 224


>gi|327395780|dbj|BAK13202.1| DNA repair protein RadC RadC [Pantoea ananatis AJ13355]
          Length = 228

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       G+I+ V V+ REIV+  L+++A ++I+ HNHPSG   PS AD 
Sbjct: 132 MFLDNQHRVITARQMFSGSINSVEVHPREIVREALKINAAALIIAHNHPSGRAEPSQADR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I      +NI V DH++IG+   VSF     +
Sbjct: 192 DITVKICEACRLVNIRVLDHLVIGRGESVSFTERGWL 228


>gi|300361445|ref|ZP_07057622.1| DNA repair protein RadC [Lactobacillus gasseri JV-V03]
 gi|300354064|gb|EFJ69935.1| DNA repair protein RadC [Lactobacillus gasseri JV-V03]
          Length = 206

 Score =  130 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +IA+++  +GT++    + R+I +  +  ++T+  + HNHPSG+  PS  D+
Sbjct: 110 IYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDL 169

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ ++     + I   DH I+  + ++SF+ + ++
Sbjct: 170 RFTKKLVEASKCMGIDFLDHFIVTDNTYLSFREMELL 206


>gi|42783591|ref|NP_980838.1| DNA repair protein RadC [Bacillus cereus ATCC 10987]
 gi|54036227|sp|Q72ZX2|Y4545_BACC1 RecName: Full=UPF0758 protein BCE_4545
 gi|42739520|gb|AAS43446.1| DNA repair protein RadC [Bacillus cereus ATCC 10987]
          Length = 225

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|258514688|ref|YP_003190910.1| DNA repair protein RadC [Desulfotomaculum acetoxidans DSM 771]
 gi|257778393|gb|ACV62287.1| DNA repair protein RadC [Desulfotomaculum acetoxidans DSM 771]
          Length = 227

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I+ E  S GT++   V+ RE+ +  ++ SA +IIL+HNHPSG+P PS  DI
Sbjct: 131 LLLNTKNRVISLEAISVGTLNSSNVHPRELFKVAIKRSAAAIILIHNHPSGDPTPSREDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ +      + I V DHI+IG   FVS K   +
Sbjct: 191 DVTERLGEAGKIVGIDVLDHIVIGDGKFVSLKAKGL 226


>gi|84514871|ref|ZP_01002234.1| DNA repair protein RadC [Loktanella vestfoldensis SKA53]
 gi|84511030|gb|EAQ07484.1| DNA repair protein RadC [Loktanella vestfoldensis SKA53]
          Length = 220

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/96 (58%), Positives = 71/96 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N+LIADE Q++GT+DHVPVY RE+V+R LEL+A S+ILVHNHPSG+P PS ADI
Sbjct: 124 LFLDTKNVLIADEEQAKGTLDHVPVYPREVVKRALELNAASMILVHNHPSGDPTPSQADI 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            MT+ I      + I VHDH+IIGK   +S +   +
Sbjct: 184 TMTRQISDAAGTMGITVHDHLIIGKSCEISLRAQGL 219


>gi|251771587|gb|EES52163.1| DNA repair protein RadC [Leptospirillum ferrodiazotrophum]
          Length = 232

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + L   E  S GT+   PV+ RE     +  SA+++I VHNHPSG+P PS  D 
Sbjct: 133 LLLDTRHRLRRMEKISEGTLAMTPVHPREAFSPAVRESASAVIFVHNHPSGDPEPSPEDW 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           ++T  ++     L I V DHI+IG  A+VS +   
Sbjct: 193 SLTTRLVECGTLLGIRVLDHIVIGDHAYVSLRERG 227


>gi|330807440|ref|YP_004351902.1| Putative DNA repair protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375548|gb|AEA66898.1| Putative DNA repair protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 165

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGT+D   VY RE+V+  LE +A ++ILVHNHPSG+P PS AD 
Sbjct: 69  LMLDAKHRVIGFRELFRGTLDGASVYPREVVKIALEHNAAAVILVHNHPSGDPEPSQADY 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   LN +   + DH+++G D  VS      +
Sbjct: 129 ALTTTLKNALNMVGTRILDHVVVGHDGCVSLAERGYL 165


>gi|297529218|ref|YP_003670493.1| DNA repair protein RadC [Geobacillus sp. C56-T3]
 gi|297252470|gb|ADI25916.1| DNA repair protein RadC [Geobacillus sp. C56-T3]
          Length = 226

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +    G+++   V+ RE+ +  ++ SA S+I VHNHPSG+P PS  DI
Sbjct: 130 IYLNTKNQVIYRKTVFIGSLNASIVHPREVFKEAIKRSAASVICVHNHPSGDPTPSREDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DH+IIG   F+S K    +
Sbjct: 190 DVTKRLAECGRIIGIELLDHLIIGDQKFISLKEKGYV 226


>gi|238798215|ref|ZP_04641701.1| DNA repair protein, RadC family [Yersinia mollaretii ATCC 43969]
 gi|238717952|gb|EEQ09782.1| DNA repair protein, RadC family [Yersinia mollaretii ATCC 43969]
          Length = 157

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+A E  S GT +   VY RE+V R L     ++++ HNHP+G+P PS AD 
Sbjct: 59  LFLDNRHRLMASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADR 118

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++  LN ++I V DH+IIG+   VS   L  +
Sbjct: 119 TLTARLVNALNMVDIRVLDHLIIGESEPVSLAELGWL 155


>gi|229163410|ref|ZP_04291361.1| DNA repair protein radC [Bacillus cereus R309803]
 gi|228619979|gb|EEK76854.1| DNA repair protein radC [Bacillus cereus R309803]
          Length = 225

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|152984586|ref|YP_001351411.1| DNA repair protein RadC [Pseudomonas aeruginosa PA7]
 gi|166218788|sp|A6VEC6|Y6095_PSEA7 RecName: Full=UPF0758 protein PSPA7_6095
 gi|150959744|gb|ABR81769.1| DNA repair protein RadC [Pseudomonas aeruginosa PA7]
          Length = 224

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV  +G+ID   VY R++V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 128 LFLDTRHRVLAFEVLFQGSIDGASVYPRQVVKRALAHNAAALILTHNHPSGDARPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DH IIG    +S      +
Sbjct: 188 QLTARLKEALALIDVRVLDHFIIGDGEPLSLAEYGWM 224


>gi|331005821|ref|ZP_08329177.1| DNA repair protein [gamma proteobacterium IMCC1989]
 gi|330420360|gb|EGG94670.1| DNA repair protein [gamma proteobacterium IMCC1989]
          Length = 169

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + +I  E+   GTID   VY RE+V+  L+ +A +IIL HNHPSG+P PS AD 
Sbjct: 73  IYLDSQHGIIDFEILFHGTIDAASVYPREVVKSALKYNAAAIILAHNHPSGSPEPSSADK 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  IIT L  ++I V DH+I+G    +SF  L ++
Sbjct: 133 RITDQIITALKTVDIRVLDHLIVGGTQSISFAELGLL 169


>gi|324328357|gb|ADY23617.1| hypothetical protein YBT020_21945 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 225

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|227883870|ref|ZP_04001675.1| DNA repair protein RadC [Escherichia coli 83972]
 gi|300984866|ref|ZP_07177154.1| putative DNA repair protein RadC [Escherichia coli MS 45-1]
 gi|307312940|ref|ZP_07592568.1| DNA repair protein RadC [Escherichia coli W]
 gi|227839148|gb|EEJ49614.1| DNA repair protein RadC [Escherichia coli 83972]
 gi|300408295|gb|EFJ91833.1| putative DNA repair protein RadC [Escherichia coli MS 45-1]
 gi|306907108|gb|EFN37615.1| DNA repair protein RadC [Escherichia coli W]
 gi|307555795|gb|ADN48570.1| conserved phage-associated protein [Escherichia coli ABU 83972]
 gi|315063591|gb|ADT77918.1| DNA Repair Protein [Escherichia coli W]
 gi|315292951|gb|EFU52303.1| putative DNA repair protein RadC [Escherichia coli MS 153-1]
 gi|323380328|gb|ADX52596.1| DNA repair protein RadC [Escherichia coli KO11]
          Length = 157

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+  E    GTI+   V+ REIV+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T NI+ TL+ + + V DH IIG    +SF     +
Sbjct: 121 LITTNIVKTLDLVKVRVLDHFIIGAGDVLSFAERGWL 157


>gi|116050520|ref|YP_790661.1| RadC-like protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115585741|gb|ABJ11756.1| RadC-like protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 168

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI       GTID   V+ RE+V++ L L+A ++I+ HNHPSGNP PS AD 
Sbjct: 72  LFLDTRHRLIDYVEMFHGTIDAAEVHPREVVKQALRLNAAAVIVSHNHPSGNPEPSAADR 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +   L  +++   DHII+      SF    +I
Sbjct: 132 AMTAQLRQALALVDVRTLDHIIVAGTRTTSFAECGLI 168


>gi|304320238|ref|YP_003853881.1| DNA repair protein RadC [Parvularcula bermudensis HTCC2503]
 gi|303299140|gb|ADM08739.1| DNA repair protein RadC [Parvularcula bermudensis HTCC2503]
          Length = 245

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 69/97 (71%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N+LIADEV   GT++  PVY RE+V+R L L A+++IL+HNHPSG+P PS ADI
Sbjct: 149 LYLNAKNVLIADEVHGSGTVNQTPVYPREVVKRALHLDASALILIHNHPSGDPTPSTADI 208

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++     + + VHDH++IG++   SFK L ++
Sbjct: 209 KVTAQLVAAAATVGVTVHDHLVIGREGHASFKSLGLL 245


>gi|30264522|ref|NP_846899.1| DNA repair protein RadC [Bacillus anthracis str. Ames]
 gi|47529985|ref|YP_021333.1| DNA repair protein RadC [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187346|ref|YP_030598.1| DNA repair protein RadC [Bacillus anthracis str. Sterne]
 gi|49478639|ref|YP_038504.1| DNA repair protein RadC [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|65321823|ref|ZP_00394782.1| COG2003: DNA repair proteins [Bacillus anthracis str. A2012]
 gi|165872011|ref|ZP_02216652.1| DNA repair protein RadC [Bacillus anthracis str. A0488]
 gi|167636192|ref|ZP_02394496.1| DNA repair protein RadC [Bacillus anthracis str. A0442]
 gi|167640700|ref|ZP_02398960.1| DNA repair protein RadC [Bacillus anthracis str. A0193]
 gi|170688713|ref|ZP_02879918.1| DNA repair protein RadC [Bacillus anthracis str. A0465]
 gi|170708383|ref|ZP_02898827.1| DNA repair protein RadC [Bacillus anthracis str. A0389]
 gi|177653967|ref|ZP_02936008.1| DNA repair protein RadC [Bacillus anthracis str. A0174]
 gi|190566980|ref|ZP_03019896.1| DNA repair protein RadC [Bacillus anthracis Tsiankovskii-I]
 gi|225866435|ref|YP_002751813.1| DNA repair protein RadC [Bacillus cereus 03BB102]
 gi|227817234|ref|YP_002817243.1| DNA repair protein RadC [Bacillus anthracis str. CDC 684]
 gi|228917092|ref|ZP_04080650.1| DNA repair protein radC [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228948168|ref|ZP_04110452.1| DNA repair protein radC [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123994|ref|ZP_04253186.1| DNA repair protein radC [Bacillus cereus 95/8201]
 gi|229601494|ref|YP_002868738.1| DNA repair protein RadC [Bacillus anthracis str. A0248]
 gi|254687056|ref|ZP_05150914.1| DNA repair protein RadC [Bacillus anthracis str. CNEVA-9066]
 gi|254724618|ref|ZP_05186401.1| DNA repair protein RadC [Bacillus anthracis str. A1055]
 gi|254736558|ref|ZP_05194264.1| DNA repair protein RadC [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741596|ref|ZP_05199283.1| DNA repair protein RadC [Bacillus anthracis str. Kruger B]
 gi|254754806|ref|ZP_05206841.1| DNA repair protein RadC [Bacillus anthracis str. Vollum]
 gi|254757638|ref|ZP_05209665.1| DNA repair protein RadC [Bacillus anthracis str. Australia 94]
 gi|301055961|ref|YP_003794172.1| DNA repair protein [Bacillus anthracis CI]
 gi|33301484|sp|Q81LD7|Y4685_BACAN RecName: Full=UPF0758 protein BA_4685/GBAA_4685/BAS4351
 gi|54036223|sp|Q6HD72|Y4187_BACHK RecName: Full=UPF0758 protein BT9727_4187
 gi|254764425|sp|C3P9D9|Y4704_BACAA RecName: Full=UPF0758 protein BAA_4704
 gi|254764426|sp|C3L6Y5|Y4721_BACAC RecName: Full=UPF0758 protein BAMEG_4721
 gi|254764427|sp|C1ETQ0|Y4566_BACC3 RecName: Full=UPF0758 protein BCA_4566
 gi|30259180|gb|AAP28385.1| DNA repair protein RadC [Bacillus anthracis str. Ames]
 gi|47505133|gb|AAT33809.1| DNA repair protein RadC [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181273|gb|AAT56649.1| DNA repair protein RadC [Bacillus anthracis str. Sterne]
 gi|49330195|gb|AAT60841.1| DNA repair protein [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|164712301|gb|EDR17837.1| DNA repair protein RadC [Bacillus anthracis str. A0488]
 gi|167511272|gb|EDR86658.1| DNA repair protein RadC [Bacillus anthracis str. A0193]
 gi|167528413|gb|EDR91181.1| DNA repair protein RadC [Bacillus anthracis str. A0442]
 gi|170126758|gb|EDS95641.1| DNA repair protein RadC [Bacillus anthracis str. A0389]
 gi|170667399|gb|EDT18157.1| DNA repair protein RadC [Bacillus anthracis str. A0465]
 gi|172081022|gb|EDT66100.1| DNA repair protein RadC [Bacillus anthracis str. A0174]
 gi|190561971|gb|EDV15940.1| DNA repair protein RadC [Bacillus anthracis Tsiankovskii-I]
 gi|225786937|gb|ACO27154.1| DNA repair protein RadC [Bacillus cereus 03BB102]
 gi|227003430|gb|ACP13173.1| DNA repair protein RadC [Bacillus anthracis str. CDC 684]
 gi|228659296|gb|EEL14944.1| DNA repair protein radC [Bacillus cereus 95/8201]
 gi|228811526|gb|EEM57863.1| DNA repair protein radC [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228842510|gb|EEM87600.1| DNA repair protein radC [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229265902|gb|ACQ47539.1| DNA repair protein RadC [Bacillus anthracis str. A0248]
 gi|300378130|gb|ADK07034.1| DNA repair protein [Bacillus cereus biovar anthracis str. CI]
          Length = 225

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|307129553|ref|YP_003881569.1| DNA repair protein RadC [Dickeya dadantii 3937]
 gi|306527082|gb|ADM97012.1| DNA repair protein RadC [Dickeya dadantii 3937]
          Length = 203

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL   + LI       GT+    VY REIV++ L  +A ++IL HNHPSGN  PS AD+
Sbjct: 107 LFLTTRHRLIEYAELFYGTLATTAVYPREIVRKALSCNAAAVILAHNHPSGNTEPSQADL 166

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DHII+G +  +SF    ++
Sbjct: 167 MLTRRVSAALALVDVRVLDHIIVGGNDTLSFAERALL 203


>gi|90023318|ref|YP_529145.1| DEAD/DEAH box helicase-like protein [Saccharophagus degradans 2-40]
 gi|122995779|sp|Q21EE6|Y3678_SACD2 RecName: Full=UPF0758 protein Sde_3678
 gi|89952918|gb|ABD82933.1| DNA repair protein RadC [Saccharophagus degradans 2-40]
          Length = 224

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N LI       GTID   VY RE+V+  L  +A ++IL HNHPSG   PS+ D 
Sbjct: 128 ILLNTQNQLIKFVELFNGTIDSASVYPREVVKTALSHNAAAVILAHNHPSGIAEPSEPDK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I   DH+++G    VSF     I
Sbjct: 188 AITKRLQQALQLVDIRTLDHLVVGDTEAVSFAERGWI 224


>gi|319651725|ref|ZP_08005851.1| DNA repair protein RadC [Bacillus sp. 2_A_57_CT2]
 gi|317396544|gb|EFV77256.1| DNA repair protein RadC [Bacillus sp. 2_A_57_CT2]
          Length = 229

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +    G+++   V+ RE+ +     SA SII +HNHPSG+P PS  DI
Sbjct: 133 LYLNTKNQVLHKKTIFIGSLNASIVHPREVFKEAFRRSAASIICIHNHPSGDPTPSREDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +  +   + I V DH+IIG++ FVS K    +
Sbjct: 193 EVTKRLAESGKIIGIEVLDHLIIGENKFVSLKEKGYL 229


>gi|239827887|ref|YP_002950511.1| DNA repair protein RadC [Geobacillus sp. WCH70]
 gi|259551864|sp|C5D5H7|Y2550_GEOSW RecName: Full=UPF0758 protein GWCH70_2550
 gi|239808180|gb|ACS25245.1| DNA repair protein RadC [Geobacillus sp. WCH70]
          Length = 226

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +    G+++   V+ RE+ +  ++ SA SII VHNHPSG+P PS  DI
Sbjct: 130 IYLNTKNQVIHRKTIFIGSLNASIVHPREVFKEAIKRSAASIICVHNHPSGDPTPSREDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DH+IIG   FVS K    +
Sbjct: 190 DVTKRLAECGRIIGIELLDHLIIGDQKFVSLKEKGYV 226


>gi|312882919|ref|ZP_07742651.1| DNA repair protein RadC [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369438|gb|EFP96958.1| DNA repair protein RadC [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 224

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +++ E    GTID   VY RE+V+R LE++A +IIL HNHPSG   PS +D 
Sbjct: 128 IFLDSQHRVLSCESLFFGTIDCASVYPREVVKRSLEMNAAAIILAHNHPSGVAEPSQSDR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+  +  ++I V DH ++G   FVSF     I
Sbjct: 188 RITRKIVDAMGLVDIRVLDHFVVGDGEFVSFAERGWI 224


>gi|229105092|ref|ZP_04235743.1| DNA repair protein radC [Bacillus cereus Rock3-28]
 gi|228678273|gb|EEL32499.1| DNA repair protein radC [Bacillus cereus Rock3-28]
          Length = 225

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|90415484|ref|ZP_01223418.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2207]
 gi|90332807|gb|EAS47977.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2207]
          Length = 217

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI      +GT+D   V+ RE+V R L  +A ++I+ HNHPSG   PS ADI
Sbjct: 121 LLLDSKHQLIDTHELFQGTVDAASVHPREVVARALRKNAAAVIVAHNHPSGLAEPSQADI 180

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   LN + I + DH+IIG+   VS      +
Sbjct: 181 DITRRLKQALNLVEIRLLDHLIIGRGEVVSLAQRGKL 217


>gi|91786850|ref|YP_547802.1| DNA repair protein RadC [Polaromonas sp. JS666]
 gi|91696075|gb|ABE42904.1| DNA replication and repair protein RadC [Polaromonas sp. JS666]
          Length = 244

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGT+    VY RE+V R L L+A S++L HNHPSG   PS AD 
Sbjct: 148 LFLDSQHRLIALEELFRGTLTQTSVYPREVVVRALALNAASVVLAHNHPSGAATPSRADE 207

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + + L  +++ V DH ++     VS   L ++
Sbjct: 208 ALTQTLKSALALVDVRVLDHFVVTSTQAVSMAELGLL 244


>gi|312598047|gb|ADQ89981.1| DNA-repair protein [Proteus mirabilis]
          Length = 223

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I  E   +GT+D V V+ REI+++ ++ +A SIIL HNHPSG   PS AD 
Sbjct: 127 LFLDNQNQMIDCEEMFKGTVDRVEVHPREIIRQSIKKNAASIILAHNHPSGLSEPSLADK 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I T    + I V DH+++G D+ VSF     +
Sbjct: 187 QITEKIFTACQLVGIKVLDHLVVGHDSCVSFAERGWL 223


>gi|229198583|ref|ZP_04325285.1| DNA repair protein radC [Bacillus cereus m1293]
 gi|228584865|gb|EEK42981.1| DNA repair protein radC [Bacillus cereus m1293]
          Length = 225

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|84390134|ref|ZP_00991396.1| DNA repair protein [Vibrio splendidus 12B01]
 gi|84376788|gb|EAP93663.1| DNA repair protein [Vibrio splendidus 12B01]
          Length = 157

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I+ HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIMAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  +   SF     +
Sbjct: 122 RITERLKGALALVDVRVLDH-IVTGETCTSFAERGWL 157


>gi|238790651|ref|ZP_04634415.1| DNA repair protein, RadC family [Yersinia frederiksenii ATCC 33641]
 gi|238721256|gb|EEQ12932.1| DNA repair protein, RadC family [Yersinia frederiksenii ATCC 33641]
          Length = 157

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+A E  S GT +   VY RE+V R L     ++++ HNHP+G+P PS AD 
Sbjct: 59  LYLDNRHRLMASETMSIGTFNATTVYPREVVIRALHHHCAAVVIAHNHPAGDPTPSQADR 118

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++  LN ++I V DH+IIG+   VS   L  +
Sbjct: 119 TLTTRLVNALNMVDIRVLDHLIIGESEPVSLAELGWL 155


>gi|121534093|ref|ZP_01665918.1| DNA repair protein RadC [Thermosinus carboxydivorans Nor1]
 gi|121307196|gb|EAX48113.1| DNA repair protein RadC [Thermosinus carboxydivorans Nor1]
          Length = 232

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L   N ++A  V S G+++   V+ RE+ +  +  SA ++ILVHNHPSG+P PS  DI
Sbjct: 136 LLLSTKNHVLAMPVISVGSLNASLVHPRELFREAINHSAAAVILVHNHPSGDPTPSREDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++     L I V DH+IIG   +VS K   II
Sbjct: 196 EITGKMVQAGEILGIAVLDHVIIGDGKYVSLKEKGII 232


>gi|269137424|ref|YP_003294124.1| DNA repair protein [Edwardsiella tarda EIB202]
 gi|267983084|gb|ACY82913.1| DNA repair protein [Edwardsiella tarda EIB202]
 gi|304557498|gb|ADM40162.1| DNA repair protein RadC [Edwardsiella tarda FL6-60]
          Length = 228

 Score =  130 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTI+ V VY REIV+  L+L+A ++IL HNHPSGNP PS AD 
Sbjct: 132 LFLDNQHRVIRSEQMFSGTINCVDVYPREIVREALKLNAVALILAHNHPSGNPEPSVADR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      ++I V DH++IG    VSF     I
Sbjct: 192 LLTERVAKACALVDIQVLDHMVIGHGQRVSFAERGWI 228


>gi|153801495|ref|ZP_01956081.1| DNA repair protein RadC family protein [Vibrio cholerae MZO-3]
 gi|124122986|gb|EAY41729.1| DNA repair protein RadC family protein [Vibrio cholerae MZO-3]
          Length = 157

 Score =  130 bits (328), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNRLIEFKDLFHGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157


>gi|116629851|ref|YP_815023.1| DNA repair protein [Lactobacillus gasseri ATCC 33323]
 gi|311110510|ref|ZP_07711907.1| DNA repair protein RadC [Lactobacillus gasseri MV-22]
 gi|116095433|gb|ABJ60585.1| DNA repair protein [Lactobacillus gasseri ATCC 33323]
 gi|311065664|gb|EFQ46004.1| DNA repair protein RadC [Lactobacillus gasseri MV-22]
          Length = 206

 Score =  130 bits (328), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +IA+++  +GT++    + R+I +  +  ++T+  + HNHPSG+  PS  D+
Sbjct: 110 IYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDL 169

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ ++     + I   DH I+  + ++SF+ + ++
Sbjct: 170 RFTKKLVEASKCMGIDFLDHFIVTDNTYLSFREMELL 206


>gi|54307423|ref|YP_128443.1| DNA repair protein RadC [Photobacterium profundum SS9]
 gi|54036225|sp|Q6LVN4|Y202_PHOPR RecName: Full=UPF0758 protein PBPRA0202
 gi|46911843|emb|CAG18641.1| putative DNA repair protein RadC [Photobacterium profundum SS9]
          Length = 224

 Score =  130 bits (328), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA EV   GTI+   VY REIV+R LE +A ++IL HNHPSG   PS +D+
Sbjct: 128 LFLDNQHRVIAGEVLFEGTINSAAVYPREIVKRSLEFNAVALILAHNHPSGVAEPSQSDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I   L  ++I V DH I+G    VSF     +
Sbjct: 188 RITRTISDALALVDIRVLDHFIVGDGEIVSFSEQGWL 224


>gi|52141051|ref|YP_085777.1| DNA repair protein RadC [Bacillus cereus E33L]
 gi|81686057|sp|Q633Z0|Y4198_BACCZ RecName: Full=UPF0758 protein BCE33L4198
 gi|51974520|gb|AAU16070.1| DNA repair protein [Bacillus cereus E33L]
          Length = 225

 Score =  130 bits (328), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|270265228|ref|ZP_06193490.1| DNA repair protein RadC [Serratia odorifera 4Rx13]
 gi|270040862|gb|EFA13964.1| DNA repair protein RadC [Serratia odorifera 4Rx13]
          Length = 228

 Score =  130 bits (328), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI  V V+ REIV+  L+ +A +IIL HNHPSG   PS AD 
Sbjct: 132 LFLDNQHRVIRHQEMFAGTISSVVVHPREIVREALKANAAAIILAHNHPSGKAEPSHADR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++++     L I V DH++IG+   VSF     +
Sbjct: 192 LITEHVVNACLLLEIRVLDHLVIGRGECVSFAERGWL 228


>gi|193063615|ref|ZP_03044703.1| DNA repair protein RadC [Escherichia coli E22]
 gi|192930602|gb|EDV83208.1| DNA repair protein RadC [Escherichia coli E22]
          Length = 161

 Score =  130 bits (328), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    G+++HV V+ RE+V+  L  +A +++L HNHPSG+P PS  D 
Sbjct: 65  LYLDNQHRLLESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDR 124

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +   L  +++   DH+++G+D  VSF     +
Sbjct: 125 NITGRLKEALELVDVKTLDHLVVGRDGIVSFAERGWL 161


>gi|301154718|emb|CBW14181.1| protein associated with replication fork, possible DNA repair
           protein [Haemophilus parainfluenzae T3T1]
          Length = 221

 Score =  130 bits (328), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVTNVYPREIIKESLYCNAAALILAHNHPSGIAEPSYSDK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ II     + I + DH I+GK    SF    ++
Sbjct: 185 MITQKIIEAAELMEIRILDHFIVGKGTCYSFAEHNLL 221


>gi|238756176|ref|ZP_04617495.1| DNA repair protein, RadC family [Yersinia ruckeri ATCC 29473]
 gi|238705591|gb|EEP97989.1| DNA repair protein, RadC family [Yersinia ruckeri ATCC 29473]
          Length = 157

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+A E  S GT +   VY RE+V R L     ++++ HNHP+G+P PS AD 
Sbjct: 59  LFLDNRHRLMASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADR 118

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++  LN ++I V DH+IIG+   VS   L  +
Sbjct: 119 TLTARLVNALNMVDIRVLDHLIIGESEPVSLAELGWL 155


>gi|228935773|ref|ZP_04098585.1| DNA repair protein radC [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823830|gb|EEM69650.1| DNA repair protein radC [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 225

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|229186695|ref|ZP_04313854.1| DNA repair protein radC [Bacillus cereus BGSC 6E1]
 gi|228596798|gb|EEK54459.1| DNA repair protein radC [Bacillus cereus BGSC 6E1]
          Length = 225

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|291619457|ref|YP_003522199.1| RadC [Pantoea ananatis LMG 20103]
 gi|291154487|gb|ADD79071.1| RadC [Pantoea ananatis LMG 20103]
          Length = 228

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       G+I+ V V+ REIV+  L+++A ++I+ HNHPSG   PS AD 
Sbjct: 132 MFLDNQHRVITARQMFSGSINSVEVHPREIVREALKINAAALIIAHNHPSGRAEPSQADR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I      +NI V DH++IG+   VSF     +
Sbjct: 192 DITVKICEACRLVNIRVLDHLVIGRGESVSFTERGWL 228


>gi|254429147|ref|ZP_05042854.1| DNA repair protein RadC [Alcanivorax sp. DG881]
 gi|196195316|gb|EDX90275.1| DNA repair protein RadC [Alcanivorax sp. DG881]
          Length = 164

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  + +++ E    GTID   VY R +VQ+ L  +A ++I  HNHPSG   PS AD 
Sbjct: 68  IFLNNKHKVLSFEPLFSGTIDGAAVYPRVVVQQALACNAAAVIFAHNHPSGCCEPSQADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DH ++ +  +VS      +
Sbjct: 128 TITTRLKDALALIDVRVLDHFVVSRSEWVSLAERGWL 164


>gi|330964261|gb|EGH64521.1| hypothetical protein PSYAC_06345 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 224

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R L  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRALAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ V DH+I+G    +S     ++
Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVEKGLM 224


>gi|206975949|ref|ZP_03236859.1| DNA repair protein RadC [Bacillus cereus H3081.97]
 gi|217961943|ref|YP_002340513.1| DNA repair protein RadC [Bacillus cereus AH187]
 gi|222097900|ref|YP_002531957.1| DNA repair protein radc [Bacillus cereus Q1]
 gi|229141192|ref|ZP_04269731.1| DNA repair protein radC [Bacillus cereus BDRD-ST26]
 gi|226736618|sp|B7HQL1|Y4587_BACC7 RecName: Full=UPF0758 protein BCAH187_A4587
 gi|254764428|sp|B9IZ29|Y4241_BACCQ RecName: Full=UPF0758 protein BCQ_4241
 gi|206745701|gb|EDZ57098.1| DNA repair protein RadC [Bacillus cereus H3081.97]
 gi|217065490|gb|ACJ79740.1| DNA repair protein RadC [Bacillus cereus AH187]
 gi|221241958|gb|ACM14668.1| DNA repair protein [Bacillus cereus Q1]
 gi|228642233|gb|EEK98525.1| DNA repair protein radC [Bacillus cereus BDRD-ST26]
          Length = 225

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|229062148|ref|ZP_04199472.1| DNA repair protein radC [Bacillus cereus AH603]
 gi|228717131|gb|EEL68807.1| DNA repair protein radC [Bacillus cereus AH603]
          Length = 240

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 144 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 203

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 204 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 240


>gi|229013669|ref|ZP_04170798.1| DNA repair protein radC [Bacillus mycoides DSM 2048]
 gi|228747591|gb|EEL97465.1| DNA repair protein radC [Bacillus mycoides DSM 2048]
          Length = 241

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 145 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 205 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 241


>gi|189423594|ref|YP_001950771.1| DNA repair protein RadC [Geobacter lovleyi SZ]
 gi|254789653|sp|B3E339|Y523_GEOLS RecName: Full=UPF0758 protein Glov_0523
 gi|189419853|gb|ACD94251.1| DNA repair protein RadC [Geobacter lovleyi SZ]
          Length = 230

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +      S G+++   V+ RE+    +  SA ++I +HNHPSG+P PS  D 
Sbjct: 134 LLLDGKNRITRKVQVSEGSLNQSIVHPREVFAPAVRESAAAVIFIHNHPSGDPAPSREDH 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I V DHIIIG  A+ SF    ++
Sbjct: 194 EITRRLNEAGEILGIKVLDHIIIGDGAYFSFVESGLL 230


>gi|294637895|ref|ZP_06716164.1| DNA repair protein RadC [Edwardsiella tarda ATCC 23685]
 gi|291088921|gb|EFE21482.1| DNA repair protein RadC [Edwardsiella tarda ATCC 23685]
          Length = 227

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTI+ V VY REIV+  L+L+A ++IL HNHPSGNP PS AD 
Sbjct: 131 LFLDNQHRVIRSEQMFSGTINCVDVYPREIVREALKLNAVALILAHNHPSGNPEPSVADR 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      ++I V DH++IG    VSF     I
Sbjct: 191 LLTARVAKACALVDIQVLDHMVIGCGQRVSFAERGWI 227


>gi|254482762|ref|ZP_05096000.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2148]
 gi|214037121|gb|EEB77790.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2148]
          Length = 193

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++  E    GT+D   VY RE+  R L+  A ++I  HNHPSG   PS AD 
Sbjct: 97  IFLDNQHRIMRCEDLFLGTLDGAAVYPREVAVRALQYRAAAVIFAHNHPSGVAEPSSADK 156

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++  L  L+I V DHII+G     SF    ++
Sbjct: 157 RITERLVAALGLLDIRVLDHIIVGSGCEFSFAEQGLL 193


>gi|91974634|ref|YP_567293.1| DNA repair protein RadC [Rhodopseudomonas palustris BisB5]
 gi|91681090|gb|ABE37392.1| DNA repair protein RadC [Rhodopseudomonas palustris BisB5]
          Length = 239

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 62/97 (63%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI
Sbjct: 143 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQADI 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I+    PL + VHDHII+GK+   S KGL++I
Sbjct: 203 QMTRTIVAIAEPLGVSVHDHIIVGKNGHASLKGLKLI 239


>gi|152998927|ref|YP_001364608.1| DNA repair protein RadC [Shewanella baltica OS185]
 gi|166218794|sp|A6WIA6|Y376_SHEB8 RecName: Full=UPF0758 protein Shew185_0376
 gi|151363545|gb|ABS06545.1| DNA repair protein RadC [Shewanella baltica OS185]
          Length = 225

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSGN  PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGNAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|47566644|ref|ZP_00237466.1| DNA repair protein RadC [Bacillus cereus G9241]
 gi|228987706|ref|ZP_04147817.1| DNA repair protein radC [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|47556674|gb|EAL15006.1| DNA repair protein RadC [Bacillus cereus G9241]
 gi|228771980|gb|EEM20435.1| DNA repair protein radC [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 225

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|326318501|ref|YP_004236173.1| DNA repair protein RadC [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323375337|gb|ADX47606.1| DNA repair protein RadC [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 237

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGT+    VY RE+V R L   A +++LVHNHPSG   PS AD 
Sbjct: 141 LFLDSQNGLIAMEEMFRGTLSQASVYPREVVVRALHHHAAAVVLVHNHPSGQVQPSRADE 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++   L  ++I V DHII+   A +S     ++
Sbjct: 201 TLTRSLTDALRLVDIRVLDHIIVAPGASLSMAEEGLL 237


>gi|254477756|ref|ZP_05091142.1| DNA repair protein RadC [Ruegeria sp. R11]
 gi|214031999|gb|EEB72834.1| DNA repair protein RadC [Ruegeria sp. R11]
          Length = 251

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADE Q++GT+DHVPVY REI ++ LEL+A+++ILVHNHPSG+P+PS +DI
Sbjct: 155 LFLDRKNCLIADEEQAKGTVDHVPVYPREIAKQALELNASALILVHNHPSGDPSPSASDI 214

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I+  L+ L I +HDH+IIGK + +SF+    +
Sbjct: 215 AMTDRILQALDALGITLHDHLIIGKSSELSFRSSGYL 251


>gi|330876490|gb|EGH10639.1| hypothetical protein PSYMP_14329 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 224

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R L  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRALAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ V DH+I+G    +S     ++
Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVEKGLM 224


>gi|196034552|ref|ZP_03101961.1| DNA repair protein RadC [Bacillus cereus W]
 gi|228929500|ref|ZP_04092520.1| DNA repair protein radC [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|195993094|gb|EDX57053.1| DNA repair protein RadC [Bacillus cereus W]
 gi|228830180|gb|EEM75797.1| DNA repair protein radC [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 225

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|84386431|ref|ZP_00989459.1| DNA repair protein [Vibrio splendidus 12B01]
 gi|84378855|gb|EAP95710.1| DNA repair protein [Vibrio splendidus 12B01]
          Length = 158

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +    GT+D   VY RE+V+  LE++A ++I+ HNHPSG   PS AD 
Sbjct: 63  LLLDNQNRLIEFKELFHGTVDAASVYPREVVKAVLEVNAAAVIMAHNHPSGYSTPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  +   SF     +
Sbjct: 123 RITERLKDALALVDVRVLDH-IVTGETCTSFAERGWL 158


>gi|314938909|ref|ZP_07846176.1| DNA repair protein RadC [Enterococcus faecium TX0133a04]
 gi|314943095|ref|ZP_07849896.1| DNA repair protein RadC [Enterococcus faecium TX0133C]
 gi|314948108|ref|ZP_07851509.1| DNA repair protein RadC [Enterococcus faecium TX0082]
 gi|314951626|ref|ZP_07854671.1| DNA repair protein RadC [Enterococcus faecium TX0133A]
 gi|314993869|ref|ZP_07859203.1| DNA repair protein RadC [Enterococcus faecium TX0133B]
 gi|314996710|ref|ZP_07861733.1| DNA repair protein RadC [Enterococcus faecium TX0133a01]
 gi|313589148|gb|EFR67993.1| DNA repair protein RadC [Enterococcus faecium TX0133a01]
 gi|313591679|gb|EFR70524.1| DNA repair protein RadC [Enterococcus faecium TX0133B]
 gi|313596222|gb|EFR75067.1| DNA repair protein RadC [Enterococcus faecium TX0133A]
 gi|313598197|gb|EFR77042.1| DNA repair protein RadC [Enterococcus faecium TX0133C]
 gi|313641783|gb|EFS06363.1| DNA repair protein RadC [Enterococcus faecium TX0133a04]
 gi|313645444|gb|EFS10024.1| DNA repair protein RadC [Enterococcus faecium TX0082]
          Length = 212

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G+++    + REI    +   A  I+L HNHPSGN  PS  D+
Sbjct: 113 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGNVIPSQQDM 172

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N T+ I      + I V DH+IIG+  + S +   ++
Sbjct: 173 NFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 209


>gi|297616876|ref|YP_003702035.1| DNA repair protein RadC [Syntrophothermus lipocalidus DSM 12680]
 gi|297144713|gb|ADI01470.1| DNA repair protein RadC [Syntrophothermus lipocalidus DSM 12680]
          Length = 229

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD+ N +I+ E  S G +    V+ RE+ +  ++ SA  IILVHNHPSG+P+PS  DI
Sbjct: 133 VYLDRKNQIISIETISIGGLASSIVHPREVFKPAVKKSAAGIILVHNHPSGDPSPSQEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I + DHIIIG   ++S +G  II
Sbjct: 193 EVTRRLVEAGRIIGIEIVDHIIIGDRDYLSMRGRGII 229


>gi|197286970|ref|YP_002152842.1| DNA repair protein [Proteus mirabilis HI4320]
 gi|194684457|emb|CAR46202.1| DNA repair protein [Proteus mirabilis HI4320]
 gi|301072223|gb|ADK56077.1| RadC [Proteus mirabilis]
 gi|301072245|gb|ADK56098.1| RadC [Proteus mirabilis]
 gi|312598063|gb|ADQ89996.1| DNA-repair protein [Proteus mirabilis]
          Length = 223

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I  E   +GT+D V V+ REI+++ ++ +A SIIL HNHPSG   PS AD 
Sbjct: 127 LFLDNQNQMIDCEEMFKGTVDRVEVHPREIIRQSIKKNAASIILAHNHPSGLSEPSLADK 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I T    + I V DH+++G D  VSF     +
Sbjct: 187 QITEKIFTACQLVGIKVLDHLVVGHDNCVSFAERGWL 223


>gi|295399379|ref|ZP_06809361.1| DNA repair protein RadC [Geobacillus thermoglucosidasius C56-YS93]
 gi|312110061|ref|YP_003988377.1| DNA repair protein RadC [Geobacillus sp. Y4.1MC1]
 gi|294978845|gb|EFG54441.1| DNA repair protein RadC [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215162|gb|ADP73766.1| DNA repair protein RadC [Geobacillus sp. Y4.1MC1]
          Length = 226

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +    G+++   V+ RE+ +  ++ SA SII  HNHPSG+P PS  DI
Sbjct: 130 IYLNTKNQVIYRKTIFIGSLNASIVHPREVFKEAIKRSAASIICAHNHPSGDPTPSREDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DH+IIG   FVS K    +
Sbjct: 190 DVTKRLAECGRIIGIELLDHLIIGDQKFVSLKEKGYM 226


>gi|330831605|ref|YP_004394557.1| DNA repair protein RadC [Aeromonas veronii B565]
 gi|328806741|gb|AEB51940.1| DNA repair protein RadC [Aeromonas veronii B565]
          Length = 224

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I       GTID   V+ REIVQ  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 128 LLLDNQHRVIQFVELFFGTIDSASVWPREIVQIALKHNAAAVILAHNHPSGVAEPSRADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L  ++I V DH++IG    VSF     +
Sbjct: 188 QITDRITAALALIDIRVLDHLVIGDGITVSFAERGWL 224


>gi|229098927|ref|ZP_04229862.1| DNA repair protein radC [Bacillus cereus Rock3-29]
 gi|228684425|gb|EEL38368.1| DNA repair protein radC [Bacillus cereus Rock3-29]
          Length = 225

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|256823436|ref|YP_003147399.1| DNA repair protein RadC [Kangiella koreensis DSM 16069]
 gi|256796975|gb|ACV27631.1| DNA repair protein RadC [Kangiella koreensis DSM 16069]
          Length = 224

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + L+A E   +GTI+   V+ R +V++ L   A ++IL HNHPSG+  PS +D 
Sbjct: 128 LFLNNQHQLLASETLFQGTINSSEVHPRVVVEKALTYHAAAVILAHNHPSGSLEPSPSDR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I   L  L+I   DHII+ +    SF    ++
Sbjct: 188 HITDKIQEALGLLDIRTLDHIIVAQGGSYSFAEHGLL 224


>gi|37528674|ref|NP_932019.1| DNA repair protein RadC [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|54036232|sp|Q7MY28|Y4865_PHOLL RecName: Full=UPF0758 protein plu4865
 gi|36788113|emb|CAE17237.1| DNA repair protein [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 230

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  E   +GTI+ V V+ REIV+  ++++A+S+IL HNHPSG+  PS AD 
Sbjct: 134 LFLNNQNRVICHEEMFKGTINKVEVHPREIVRSAIKVNASSVILAHNHPSGHAEPSLADK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +I   N + + V DH++IG+   VSF     I
Sbjct: 194 IVTDKVIDACNLVGVKVLDHLVIGRQCCVSFAERGWI 230


>gi|86747826|ref|YP_484322.1| DNA repair protein RadC [Rhodopseudomonas palustris HaA2]
 gi|123004659|sp|Q2J299|Y700_RHOP2 RecName: Full=UPF0758 protein RPB_0700
 gi|86570854|gb|ABD05411.1| DNA repair protein RadC [Rhodopseudomonas palustris HaA2]
          Length = 250

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 61/96 (63%), Positives = 75/96 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI
Sbjct: 154 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQADI 213

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            MT+ I+    PL + VHDHII+GK+   S KGL++
Sbjct: 214 QMTKTIVAIAEPLGVAVHDHIIVGKNGHASLKGLKL 249


>gi|134095642|ref|YP_001100717.1| DNA repair protein RadC [Herminiimonas arsenicoxydans]
 gi|166218782|sp|A4G7V9|Y2468_HERAR RecName: Full=UPF0758 protein HEAR2468
 gi|133739545|emb|CAL62596.1| DNA repair protein RadC homolog [Herminiimonas arsenicoxydans]
          Length = 224

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  +   RGT+ H  VY REIV+  L  +A S+IL HNHPSG P PS AD 
Sbjct: 128 LFLDVKNRLIVCDEMFRGTLTHTSVYPREIVKAALGHNAASVILAHNHPSGTPEPSAADQ 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH ++      SF     +
Sbjct: 188 TLTQALKQALMLIDVRVLDHFVVAGKQVYSFAEQGQL 224


>gi|83855405|ref|ZP_00948935.1| DNA repair protein RadC [Sulfitobacter sp. NAS-14.1]
 gi|83843248|gb|EAP82415.1| DNA repair protein RadC [Sulfitobacter sp. NAS-14.1]
          Length = 253

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 51/97 (52%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD+ N++I DE Q +GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 157 IYLDRKNVVIGDEEQGKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MTQ I    + L + +HDH+IIGK   +SF+    +
Sbjct: 217 GMTQQIFAACSALGLTLHDHLIIGKSRELSFRSEGYL 253


>gi|218233414|ref|YP_002369261.1| DNA repair protein RadC [Bacillus cereus B4264]
 gi|228923207|ref|ZP_04086497.1| DNA repair protein radC [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228960730|ref|ZP_04122369.1| DNA repair protein radC [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229111925|ref|ZP_04241469.1| DNA repair protein radC [Bacillus cereus Rock1-15]
 gi|229147024|ref|ZP_04275384.1| DNA repair protein radC [Bacillus cereus BDRD-ST24]
 gi|229152656|ref|ZP_04280844.1| DNA repair protein radC [Bacillus cereus m1550]
 gi|296504945|ref|YP_003666645.1| DNA repair protein radC [Bacillus thuringiensis BMB171]
 gi|226736617|sp|B7HE86|Y4572_BACC4 RecName: Full=UPF0758 protein BCB4264_A4572
 gi|218161371|gb|ACK61363.1| DNA repair protein RadC [Bacillus cereus B4264]
 gi|228630802|gb|EEK87443.1| DNA repair protein radC [Bacillus cereus m1550]
 gi|228636412|gb|EEK92882.1| DNA repair protein radC [Bacillus cereus BDRD-ST24]
 gi|228671489|gb|EEL26789.1| DNA repair protein radC [Bacillus cereus Rock1-15]
 gi|228798946|gb|EEM45921.1| DNA repair protein radC [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228836413|gb|EEM81764.1| DNA repair protein radC [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296325997|gb|ADH08925.1| DNA repair protein radC [Bacillus thuringiensis BMB171]
          Length = 225

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 AVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|149908601|ref|ZP_01897263.1| DNA repair protein RadC [Moritella sp. PE36]
 gi|149808435|gb|EDM68372.1| DNA repair protein RadC [Moritella sp. PE36]
          Length = 224

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTID   VY R +V++ LE +A+++I  HNHPSG   PS AD 
Sbjct: 128 LFLDNKHRVIRFEELFYGTIDSASVYPRVVVKKALERNASAVIFAHNHPSGIAEPSHADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +I+ L  +++ V DH +IG     SF     +
Sbjct: 188 MITDKLISALQLIDVKVLDHFVIGDSEIASFAERGWV 224


>gi|114567770|ref|YP_754924.1| DNA repair proteins [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338705|gb|ABI69553.1| DNA repair proteins [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 206

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++ N +++ E  S GT+    V+ RE+ +  +  +A S+ILVHNHPSG+P PS  DI
Sbjct: 110 ILLNRKNGILSVETISIGTLTSSMVHPREVFKPAIRKNAASVILVHNHPSGDPTPSREDI 169

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +      L I V DHIIIG  ++ S K   +
Sbjct: 170 EITKRLSECGQLLGIEVLDHIIIGDGSWNSLKTSGL 205


>gi|148826397|ref|YP_001291150.1| DNA repair protein RadC [Haemophilus influenzae PittEE]
 gi|148716557|gb|ABQ98767.1| DNA repair protein RadC [Haemophilus influenzae PittEE]
          Length = 214

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 118 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPSYSDQ 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 178 LITKKIQDAAELMEICVLDHLIVGKSDCYSFAENCLL 214


>gi|90580921|ref|ZP_01236723.1| DNA repair protein RadC [Vibrio angustum S14]
 gi|90437992|gb|EAS63181.1| DNA repair protein RadC [Vibrio angustum S14]
          Length = 224

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  EV   GTID   VY RE+V+R LEL+A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVITGEVLFEGTIDCASVYPREVVKRSLELNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I  +L  ++I V DH ++G    +SF     +
Sbjct: 188 RITRKISDSLALVDIRVLDHFVVGDGEIISFTERGWL 224


>gi|172044490|sp|A4STD5|Y4229_AERS4 RecName: Full=UPF0758 protein ASA_4229
          Length = 220

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I       GT+D   V+ REIVQ  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 124 LLLDNQHRVIQFVELFYGTLDSASVWPREIVQIALKHNAAAVILAHNHPSGVAEPSRADR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I+  L  ++I V DH++IG    VSF     +
Sbjct: 184 QITDRILAALALIDIRVLDHLVIGDGITVSFAERGWL 220


>gi|319764035|ref|YP_004127972.1| DNA repair protein radc [Alicycliphilus denitrificans BC]
 gi|330823690|ref|YP_004386993.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
 gi|317118596|gb|ADV01085.1| DNA repair protein RadC [Alicycliphilus denitrificans BC]
 gi|329309062|gb|AEB83477.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
          Length = 237

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGT+    VY RE+V R L   A +++L HNHPSG+  PS AD 
Sbjct: 141 LFLDGQNRLIAMEELFRGTLTQTSVYPREVVLRALHHHAAAVVLAHNHPSGSVQPSRADE 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH+I+   A +S     ++
Sbjct: 201 ALTQTLKAALALVDVRVLDHVIVAPGAALSMAEQGLV 237


>gi|297580642|ref|ZP_06942568.1| DNA repair protein RadC family protein [Vibrio cholerae RC385]
 gi|297535058|gb|EFH73893.1| DNA repair protein RadC family protein [Vibrio cholerae RC385]
          Length = 157

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG+  PS AD 
Sbjct: 62  LLLDNQNCLIEFKELFQGTVDAASVYPREVVKAVLEINAAAVIFAHNHPSGDSTPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+  D   SF     +
Sbjct: 122 RITERLKDALALVDVRVLDH-IVTGDTCTSFAERGWL 157


>gi|226945653|ref|YP_002800726.1| DNA repair protein RadC-like protein [Azotobacter vinelandii DJ]
 gi|226720580|gb|ACO79751.1| DNA repair protein RadC-like protein [Azotobacter vinelandii DJ]
          Length = 168

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI       GTID   V+ RE+V++ L ++A ++I+ HNHPSGNP PS AD 
Sbjct: 72  LFLDTRHRLIDYVEMFHGTIDAAEVHPREVVKQALRVNAAAVIVSHNHPSGNPEPSGADR 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH+I+      SF    ++
Sbjct: 132 ALTQQLKQVLALVDVRVLDHVIVAGAVATSFAERGLL 168


>gi|289674414|ref|ZP_06495304.1| DNA repair protein RadC [Pseudomonas syringae pv. syringae FF5]
 gi|330977334|gb|EGH77287.1| hypothetical protein PSYAP_11500 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 224

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ V DH+I+G    +S     ++
Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVERGLM 224


>gi|121608622|ref|YP_996429.1| DNA repair protein RadC [Verminephrobacter eiseniae EF01-2]
 gi|171769486|sp|A1WIF4|Y1654_VEREI RecName: Full=UPF0758 protein Veis_1654
 gi|121553262|gb|ABM57411.1| DNA repair protein RadC [Verminephrobacter eiseniae EF01-2]
          Length = 237

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V   L   A +++L HNHPSG+  PS AD 
Sbjct: 141 LFLDNQNRLLAMEELFRGTLTQTSVYPREVVLHALHHRAAAVVLAHNHPSGSVQPSRADE 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + +TL  +++ V DH+I+     +S   + ++
Sbjct: 201 ALTQTLKSTLALVDVRVLDHVIVAPGQALSMAEMGLL 237


>gi|153948236|ref|YP_001399737.1| RadC family DNA repair protein [Yersinia pseudotuberculosis IP
           31758]
 gi|152959731|gb|ABS47192.1| DNA repair protein, RadC family [Yersinia pseudotuberculosis IP
           31758]
          Length = 162

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+A E  S GT +   VY RE+V R L     ++++ HNHP+G+P PS AD 
Sbjct: 64  LFLDNRHRLMASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADR 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++  LN ++I V DH+IIG+   VS   L  +
Sbjct: 124 TLTAQLVNALNMVDIRVLDHLIIGESEPVSLAELGWL 160


>gi|225174937|ref|ZP_03728934.1| DNA repair protein RadC [Dethiobacter alkaliphilus AHT 1]
 gi|225169577|gb|EEG78374.1| DNA repair protein RadC [Dethiobacter alkaliphilus AHT 1]
          Length = 189

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++     S+GT++   ++ RE+    + +   S++++HNHPSG+P PS  DI
Sbjct: 93  LFLNTKNKILQHTTISKGTLNTSLIHPREVFAPAIRIKCASVVILHNHPSGDPTPSREDI 152

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DHI+IG   FVS +   ++
Sbjct: 153 DITKRLKEAGKIIGIELLDHIVIGNKGFVSLREKSLL 189


>gi|291086416|ref|ZP_06571500.1| DNA repair protein RadC [Citrobacter youngae ATCC 29220]
 gi|291068199|gb|EFE06308.1| DNA repair protein RadC [Citrobacter youngae ATCC 29220]
          Length = 215

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  + +I       GT+ HV V+ REIV+  ++++A+++IL HNHPSG   PS AD 
Sbjct: 119 IFMDSQHHVIKHSKLFSGTLSHVEVHPREIVREAIKMNASAVILAHNHPSGCAEPSKADK 178

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     ++I V DH+IIG+  +VSF     I
Sbjct: 179 LITERVVKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 215


>gi|218899622|ref|YP_002448033.1| DNA repair protein RadC [Bacillus cereus G9842]
 gi|228902983|ref|ZP_04067123.1| DNA repair protein radC [Bacillus thuringiensis IBL 4222]
 gi|228910289|ref|ZP_04074106.1| DNA repair protein radC [Bacillus thuringiensis IBL 200]
 gi|226736616|sp|B7IIW5|Y662_BACC2 RecName: Full=UPF0758 protein BCG9842_B0662
 gi|218542904|gb|ACK95298.1| DNA repair protein RadC [Bacillus cereus G9842]
 gi|228849349|gb|EEM94186.1| DNA repair protein radC [Bacillus thuringiensis IBL 200]
 gi|228856659|gb|EEN01179.1| DNA repair protein radC [Bacillus thuringiensis IBL 4222]
          Length = 225

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVLHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|323702262|ref|ZP_08113928.1| DNA repair protein RadC [Desulfotomaculum nigrificans DSM 574]
 gi|323532752|gb|EGB22625.1| DNA repair protein RadC [Desulfotomaculum nigrificans DSM 574]
          Length = 241

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA EV S GT++   V+ RE+ +R +  SA SIILVHNHPSG+P PS  DI
Sbjct: 145 VLLNIKNQVIAKEVVSIGTLNSSMVHPRELFKRAIRRSAASIILVHNHPSGDPTPSQEDI 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + + + DHI+IG + FVS K   +I
Sbjct: 205 TITKRLMEAGEIIGVQILDHIVIGFEQFVSLKAKGLI 241


>gi|172048112|sp|A5UDB6|Y7200_HAEIE RecName: Full=UPF0758 protein CGSHiEE_07200
          Length = 221

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPSYSDQ 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 185 LITKKIQDAAELMEICVLDHLIVGKSDCYSFAENCLL 221


>gi|302184918|ref|ZP_07261591.1| DNA repair protein RadC [Pseudomonas syringae pv. syringae 642]
          Length = 224

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ V DH+I+G    +S     ++
Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVERGLM 224


>gi|56476778|ref|YP_158367.1| RadC family DNA repair protein [Aromatoleum aromaticum EbN1]
 gi|56312821|emb|CAI07466.1| DNA repair protein similar to radC-family [Aromatoleum aromaticum
           EbN1]
          Length = 164

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   +G++D   VY R +VQR L L+A+++IL H HPSG   PS AD 
Sbjct: 68  VFLDSQHQVLAYEPLFKGSVDQTSVYPRVVVQRALALNASALILAHQHPSGVTEPSAADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DH I+GK A  SF    ++
Sbjct: 128 ALTDRLKDALAMVDVRVVDHFIVGKGAPYSFAEAGLL 164


>gi|124266851|ref|YP_001020855.1| hypothetical protein Mpe_A1658 [Methylibium petroleiphilum PM1]
 gi|124259626|gb|ABM94620.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 169

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA +   RGT+    VY RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 73  LFLDAQHRIIALKQMFRGTVTQTSVYPREVVKEALACNAAAVILAHNHPSGAAEPSRADE 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + T L  +++ V DH+++      SF  L ++
Sbjct: 133 FLTQTLKTALALVDVRVLDHLVVAGAEVRSFAELGLL 169


>gi|163759426|ref|ZP_02166511.1| DNA repair protein RadC [Hoeflea phototrophica DFL-43]
 gi|162283023|gb|EDQ33309.1| DNA repair protein RadC [Hoeflea phototrophica DFL-43]
          Length = 290

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 66/97 (68%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 194 LFLDKKNALIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 253

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II T  PL I VHDHIIIG+D   S KG++++
Sbjct: 254 EMTKLIIETARPLGITVHDHIIIGRDGHASLKGMKLV 290


>gi|88706890|ref|ZP_01104589.1| DNA repair protein RadC [Congregibacter litoralis KT71]
 gi|88698812|gb|EAQ95932.1| DNA repair protein RadC [Congregibacter litoralis KT71]
          Length = 171

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + +I      +GTID   VY R +VQ+ L L+A +++  HNHPSG   PS AD 
Sbjct: 75  MYLDNRHRVIETAELFQGTIDGAAVYPRVVVQQALTLNAAAVMFFHNHPSGVAEPSHADE 134

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I V DH I+     +SF    ++
Sbjct: 135 AITRRLKDALALVDIRVLDHFIVTAGESLSFAERGLL 171


>gi|229019679|ref|ZP_04176486.1| DNA repair protein radC [Bacillus cereus AH1273]
 gi|229025918|ref|ZP_04182310.1| DNA repair protein radC [Bacillus cereus AH1272]
 gi|228735364|gb|EEL85967.1| DNA repair protein radC [Bacillus cereus AH1272]
 gi|228741586|gb|EEL91779.1| DNA repair protein radC [Bacillus cereus AH1273]
          Length = 225

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|163734801|ref|ZP_02142239.1| DNA repair protein RadC [Roseobacter litoralis Och 149]
 gi|161391906|gb|EDQ16237.1| DNA repair protein RadC [Roseobacter litoralis Och 149]
          Length = 314

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 52/97 (53%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N++IADE Q++GT+DHVPVY RE+ +R LEL+A++IILVHNHPSG+P+PS  DI
Sbjct: 217 LFLDRKNVIIADEEQAKGTVDHVPVYPREVAKRALELNASAIILVHNHPSGDPSPSSQDI 276

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  + +    + + +HDH+IIGK+   SFK    +
Sbjct: 277 AMTDQVSSACLAIGVTIHDHVIIGKETEFSFKDGGYL 313


>gi|229543680|ref|ZP_04432740.1| DNA repair protein RadC [Bacillus coagulans 36D1]
 gi|229328100|gb|EEN93775.1| DNA repair protein RadC [Bacillus coagulans 36D1]
          Length = 227

 Score =  129 bits (326), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +  L  SA SII  HNHPSG+P+PS  DI
Sbjct: 131 LYLNIKNQVIHRQTIFIGSLNASIVHPREVFKEALRRSAASIICFHNHPSGDPSPSKEDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I + DH+IIG+  FVS +    +
Sbjct: 191 EVTKRLAECGKIMGIEILDHLIIGEKKFVSLRQKGYL 227


>gi|120612416|ref|YP_972094.1| DNA repair protein RadC [Acidovorax citrulli AAC00-1]
 gi|171769198|sp|A1TTN2|Y3773_ACIAC RecName: Full=UPF0758 protein Aave_3773
 gi|120590880|gb|ABM34320.1| DNA replication and repair protein RadC [Acidovorax citrulli
           AAC00-1]
          Length = 237

 Score =  129 bits (326), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGT+    VY RE+V R L   A +++LVHNHPSG   PS AD 
Sbjct: 141 LFLDSQNGLIAMEEMFRGTLSQASVYPREVVVRALHHHAAAVVLVHNHPSGQVQPSRADE 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++   L  +++ V DHII+   + +S     +I
Sbjct: 201 TLTRSLTDALRLVDVRVLDHIIVAPGSSLSMAEEGLI 237


>gi|270263658|ref|ZP_06191927.1| 'putative DNA repair protein; CP4-44 prophage' [Serratia odorifera
           4Rx13]
 gi|270042542|gb|EFA15637.1| 'putative DNA repair protein; CP4-44 prophage' [Serratia odorifera
           4Rx13]
          Length = 160

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    G+I+   V+ REIV+  L+ +A +++L H HPSG+ NPSDAD 
Sbjct: 64  LYLDNQHRLLTHETLFTGSINSTEVHPREIVKSALKHNAAAVLLAHCHPSGHANPSDADR 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L  + + V DH I+G     SF    ++
Sbjct: 124 QITCRIQEALMLVEVRVLDHCIVGGMTVYSFAEHGLL 160


>gi|254292990|ref|YP_003059013.1| DNA repair protein RadC [Hirschia baltica ATCC 49814]
 gi|254041521|gb|ACT58316.1| DNA repair protein RadC [Hirschia baltica ATCC 49814]
          Length = 272

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/97 (57%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIADE QS+GTI+H PVY RE+ +R LELSA+++ILVHNHPSG+P PS ADI
Sbjct: 176 LFLDHKNQLIADERQSQGTINHAPVYPRELAKRALELSASALILVHNHPSGDPTPSRADI 235

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ I+    PL I +HDH+I+GK    S K   +I
Sbjct: 236 DVTREIMDAFEPLEITIHDHLIVGKKGITSLKAKNLI 272


>gi|163942202|ref|YP_001647086.1| DNA repair protein RadC [Bacillus weihenstephanensis KBAB4]
 gi|229169196|ref|ZP_04296910.1| DNA repair protein radC [Bacillus cereus AH621]
 gi|229485544|sp|A9VIS8|Y4299_BACWK RecName: Full=UPF0758 protein BcerKBAB4_4299
 gi|163864399|gb|ABY45458.1| DNA repair protein RadC [Bacillus weihenstephanensis KBAB4]
 gi|228614262|gb|EEK71373.1| DNA repair protein radC [Bacillus cereus AH621]
          Length = 225

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|237807914|ref|YP_002892354.1| DNA repair protein RadC [Tolumonas auensis DSM 9187]
 gi|237500175|gb|ACQ92768.1| DNA repair protein RadC [Tolumonas auensis DSM 9187]
          Length = 165

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E   RGT++   ++ RE+V+R L ++A ++I VHNHPSG P PS+AD 
Sbjct: 69  LFLDNQHRIICFEELFRGTLNVTNIHPREVVKRALAVNAAAVIFVHNHPSGEPEPSEADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +  TLN +++ V DHI++G  A +S     ++
Sbjct: 129 KITVQLRETLNLIDVRVLDHIVVGAKACISMAERGLV 165


>gi|163737937|ref|ZP_02145353.1| DNA repair protein RadC [Phaeobacter gallaeciensis BS107]
 gi|161388553|gb|EDQ12906.1| DNA repair protein RadC [Phaeobacter gallaeciensis BS107]
          Length = 254

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/97 (55%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LIADE Q++GT+DHVPVY REI +R LE+SA+++ILVHNHPSG+P PS +DI
Sbjct: 158 LYLDRKNTLIADEEQAKGTVDHVPVYPREIAKRALEISASALILVHNHPSGDPTPSPSDI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +   L  L+I++HDH+IIGK + +SF+    +
Sbjct: 218 EMTDRVARALAALDIVLHDHLIIGKSSELSFRSAGYL 254


>gi|229823990|ref|ZP_04450059.1| hypothetical protein GCWU000282_01294 [Catonella morbi ATCC 51271]
 gi|229786344|gb|EEP22458.1| hypothetical protein GCWU000282_01294 [Catonella morbi ATCC 51271]
          Length = 231

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 55/93 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  ++   G+++    + REI +  ++     +I+ HNHPSG+P PS AD+
Sbjct: 133 LFLNSKNQVIRQQIIFIGSVNASVAHPREIFKEAVKYPTARLIIAHNHPSGDPEPSQADL 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           + TQ +I   + + I + DH IIG D +VS + 
Sbjct: 193 HFTQRMIQCGDLMGIELLDHFIIGHDDYVSLRE 225


>gi|163791281|ref|ZP_02185695.1| DNA repair protein RadC [Carnobacterium sp. AT7]
 gi|159873422|gb|EDP67512.1| DNA repair protein RadC [Carnobacterium sp. AT7]
          Length = 230

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 54/95 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  E    G ++    + REI +  +  SA  II+ HNHPSGNP PS+ADI
Sbjct: 134 LYLNTKNEIIKKETIFIGGLNSSVAHPREIFRGAVRYSAARIIVGHNHPSGNPEPSEADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
             T+ +      + I + DHIIIG+  F+S K + 
Sbjct: 194 QFTRRMSECGELMGIELLDHIIIGEQEFISLKEIG 228


>gi|85705707|ref|ZP_01036804.1| DNA repair protein RadC [Roseovarius sp. 217]
 gi|85669697|gb|EAQ24561.1| DNA repair protein RadC [Roseovarius sp. 217]
          Length = 251

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/96 (57%), Positives = 75/96 (78%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD+ NILIADE Q+RGT+DHVPVY RE+V+R L+L+A+++IL HNHPSG+P PS ADI+
Sbjct: 156 YLDRKNILIADEEQARGTVDHVPVYPREVVKRALQLNASALILAHNHPSGDPTPSAADID 215

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           MT+ + T    L + +HDHI+IGK A VSF+    +
Sbjct: 216 MTRQLQTAAEALGLALHDHIVIGKSAEVSFRSAGYL 251


>gi|319785772|ref|YP_004145247.1| DNA repair protein RadC [Pseudoxanthomonas suwonensis 11-1]
 gi|317464284|gb|ADV26016.1| DNA repair protein RadC [Pseudoxanthomonas suwonensis 11-1]
          Length = 224

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E    GTID   V+ RE+V+R L  +A ++I+ HNHPSG+P+PS AD 
Sbjct: 128 LFLDNRHRALAFEELFNGTIDGAEVHPREVVRRALAHNAAAVIVGHNHPSGSPDPSAADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  + + + DH ++G    VS     ++
Sbjct: 188 AVTARLKQALALVEVRLLDHFVVGDGEPVSMAARGLV 224


>gi|238918036|ref|YP_002931550.1| DNA repair protein RadC [Edwardsiella ictaluri 93-146]
 gi|238867604|gb|ACR67315.1| DNA repair protein RadC [Edwardsiella ictaluri 93-146]
          Length = 228

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTI+ V VY REIV+  L+L+A ++IL HNHPSGNP PS AD 
Sbjct: 132 LFLDNQHRVIRSEQMFSGTINCVDVYPREIVREALKLNAVALILAHNHPSGNPEPSVADR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      ++I V DH++IG    VSF     I
Sbjct: 192 LLTDRVAKACALVDIQVLDHMVIGHGQRVSFAERGWI 228


>gi|268318025|ref|YP_003291744.1| DNA repair protein RadC [Rhodothermus marinus DSM 4252]
 gi|262335559|gb|ACY49356.1| DNA repair protein RadC [Rhodothermus marinus DSM 4252]
          Length = 245

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IAD   S G +    V  R + QR +  +A  II +HNHPSGNP PS  DI
Sbjct: 148 VLLNTANYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSGNPEPSAEDI 207

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L I VHDHIII    + S     ++
Sbjct: 208 RITRQLVEAGRLLGIPVHDHIIIAGTTYTSLAERGLM 244


>gi|1573977|gb|AAC22613.1| DNA repair protein (radC) [Haemophilus influenzae Rd KW20]
          Length = 234

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI    VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 138 LFLDNQHRLIKKERLFLGTIYVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 198 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 234


>gi|227112487|ref|ZP_03826143.1| hypothetical protein PcarbP_05962 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 157

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI  EV + G I+   V+ REI++  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQNRLIEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGCAEPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +  +L+ L++ V DH+++G    VSF     +
Sbjct: 121 HITDKLKESLSQLDVRVLDHLVVGGAEVVSFAERGWL 157


>gi|254503230|ref|ZP_05115381.1| DNA repair protein RadC [Labrenzia alexandrii DFL-11]
 gi|222439301|gb|EEE45980.1| DNA repair protein RadC [Labrenzia alexandrii DFL-11]
          Length = 237

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/97 (62%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GT+DH PVY RE+V+R LE  AT+IILVHNHPSG+P PS ADI
Sbjct: 141 LFLDKKNGLIADELQQTGTVDHTPVYPREVVRRALEHGATAIILVHNHPSGDPTPSRADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ ++    PL I +HDHII+G  + VSFKGL++I
Sbjct: 201 QMTRQLVDIAKPLGIEIHDHIIVGLRSQVSFKGLQLI 237


>gi|259047287|ref|ZP_05737688.1| DNA repair protein RadC [Granulicatella adiacens ATCC 49175]
 gi|259036063|gb|EEW37318.1| DNA repair protein RadC [Granulicatella adiacens ATCC 49175]
          Length = 227

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  ++   G ++    + REI +  +  SA  +I+ HNHPSGNP PS ADI
Sbjct: 131 LYLNTKNEVIKKKMIFIGGLNSAVAHPREIFREAVRYSAARVIIGHNHPSGNPEPSQADI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + T+ ++     + I + DH I+G + F+S K + ++
Sbjct: 191 DFTKRLMDCGELMGIELLDHFIVGGEHFISLKEIGVL 227


>gi|15965481|ref|NP_385834.1| DNA repair protein RadC [Sinorhizobium meliloti 1021]
 gi|307302602|ref|ZP_07582358.1| DNA repair protein RadC [Sinorhizobium meliloti BL225C]
 gi|307318449|ref|ZP_07597883.1| DNA repair protein RadC [Sinorhizobium meliloti AK83]
 gi|25009036|sp|Q92PL6|Y1728_RHIME RecName: Full=UPF0758 protein R01728
 gi|15074662|emb|CAC46307.1| Probable DNA repair protein [Sinorhizobium meliloti 1021]
 gi|306895789|gb|EFN26541.1| DNA repair protein RadC [Sinorhizobium meliloti AK83]
 gi|306902966|gb|EFN33557.1| DNA repair protein RadC [Sinorhizobium meliloti BL225C]
          Length = 262

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 66/96 (68%), Positives = 77/96 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ +GTIDH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 166 LFLDKRNTLIADEVQQQGTIDHTPVYPREVVKRALELSATALILVHNHPSGDPTPSRADI 225

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           +MT+ I     PL I +HDH+IIGKD  VS KGLR+
Sbjct: 226 DMTKLIAEAAKPLGIALHDHVIIGKDGHVSLKGLRL 261


>gi|99079849|ref|YP_612003.1| DNA repair protein RadC [Ruegeria sp. TM1040]
 gi|99036129|gb|ABF62741.1| DNA repair protein RadC [Ruegeria sp. TM1040]
          Length = 258

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ NILIADE Q+RGT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 162 LYLDRKNILIADEEQARGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQADI 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +   L  L+I +HDH+IIG    +SF+   ++
Sbjct: 222 GMTRKVGAALGALDITLHDHLIIGASDELSFRSEGLL 258


>gi|77461760|ref|YP_351267.1| DNA repair protein RadC [Pseudomonas fluorescens Pf0-1]
 gi|123602798|sp|Q3K4M8|Y5539_PSEPF RecName: Full=UPF0758 protein Pfl01_5539
 gi|77385763|gb|ABA77276.1| DNA replication and repair protein RadC [Pseudomonas fluorescens
           Pf0-1]
          Length = 224

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E   RG+ID+  V+ RE+V+R L  +A ++IL HNHPSGN +PS AD 
Sbjct: 128 LFLDSKHQVLTFEALFRGSIDNTAVHPREVVKRSLANNAAAVILCHNHPSGNSDPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH I+G    +S      +
Sbjct: 188 LLTKRLQKALELIDVRVLDHFIVGDGEPLSMAECGWM 224


>gi|71734935|ref|YP_272515.1| DNA repair protein RadC [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|289625760|ref|ZP_06458714.1| DNA repair protein RadC [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289646363|ref|ZP_06477706.1| DNA repair protein RadC [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|298484831|ref|ZP_07002931.1| DNA repair protein RadC [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|123638799|sp|Q48Q04|Y210_PSE14 RecName: Full=UPF0758 protein PSPPH_0210
 gi|71555488|gb|AAZ34699.1| DNA repair protein RadC [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|298160685|gb|EFI01706.1| DNA repair protein RadC [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|320322246|gb|EFW78342.1| DNA repair protein RadC [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320331895|gb|EFW87833.1| DNA repair protein RadC [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330866535|gb|EGH01244.1| hypothetical protein PSYAE_04585 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330873142|gb|EGH07291.1| hypothetical protein Pgy4_03892 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330890934|gb|EGH23595.1| hypothetical protein PSYMO_19883 [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330986860|gb|EGH84963.1| hypothetical protein PLA107_17667 [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331009400|gb|EGH89456.1| hypothetical protein PSYTB_06881 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 224

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ V DH+I+G    +S     ++
Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVERGLM 224


>gi|163743881|ref|ZP_02151252.1| DNA repair protein RadC [Phaeobacter gallaeciensis 2.10]
 gi|161382822|gb|EDQ07220.1| DNA repair protein RadC [Phaeobacter gallaeciensis 2.10]
          Length = 254

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/97 (55%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LIADE Q++GT+DHVPVY REI +R LE+SA+++ILVHNHPSG+P PS +DI
Sbjct: 158 LYLDRKNTLIADEEQAKGTVDHVPVYPREIAKRALEISASALILVHNHPSGDPTPSPSDI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +   L  L+I++HDH+IIGK + +SF+    +
Sbjct: 218 EMTDRVARALAALDIVLHDHLIIGKSSELSFRSAGYL 254


>gi|197104531|ref|YP_002129908.1| DNA repair protein [Phenylobacterium zucineum HLK1]
 gi|196477951|gb|ACG77479.1| DNA repair protein [Phenylobacterium zucineum HLK1]
          Length = 243

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N L+ADEV + GT+DH PVY RE+V+R LELSA+++ILVHNHPSG+P PS AD+
Sbjct: 147 LFLDKKNQLLADEVMNHGTVDHAPVYPREVVRRALELSASALILVHNHPSGDPTPSSADV 206

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ ++     L I VHDH+++G+D   SFK L ++
Sbjct: 207 DMTRQVVDAARALRIAVHDHLVVGRDGVASFKALGLM 243


>gi|311031478|ref|ZP_07709568.1| DNA repair protein RadC [Bacillus sp. m3-13]
          Length = 232

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +    G+++   V+ RE+ +     SA S I +HNHPSG+P PS  DI
Sbjct: 136 LYLNTKNQVLHQQTVFIGSLNASIVHPREVFKEAFRRSAASFICIHNHPSGDPAPSREDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DH+IIG   F+S K    +
Sbjct: 196 DVTKRLSECGKLIGIELLDHLIIGDQKFISLKEKGYV 232


>gi|254247438|ref|ZP_04940759.1| DNA repair protein RadC [Burkholderia cenocepacia PC184]
 gi|124872214|gb|EAY63930.1| DNA repair protein RadC [Burkholderia cenocepacia PC184]
          Length = 257

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N LI  E  +RG++  + VY REIV+R ++ +A ++I+ HNHPSG   PS  D 
Sbjct: 161 VYLDARNRLIDMEEIARGSLTRMAVYPREIVRRAMKHNAAALIVAHNHPSGAVQPSAEDR 220

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G     SF     +
Sbjct: 221 RLTRVLKDALELVDVRLLDHVVVGVSDTFSFARAGWL 257


>gi|307945547|ref|ZP_07660883.1| putative DNA repair RadC-like protein [Roseibium sp. TrichSKD4]
 gi|307771420|gb|EFO30645.1| putative DNA repair RadC-like protein [Roseibium sp. TrichSKD4]
          Length = 237

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+++R LEL +T+++L+HNHPSG+P PS ADI
Sbjct: 141 LFLDKKNGLIADEVQQEGTVDHTPVYPREVIRRALELQSTALVLIHNHPSGDPTPSRADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ ++    PL I +HDHII+ + A VSF+G++++
Sbjct: 201 QMTRQLVEIAKPLGIEIHDHIIVARGAHVSFRGMQLM 237


>gi|59713705|ref|YP_206480.1| DNA repair protein RadC [Vibrio fischeri ES114]
 gi|59481953|gb|AAW87592.1| DNA repair protein RadC [Vibrio fischeri ES114]
          Length = 157

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI  +   +GT+D   VY RE+V+  LE++A ++I  HNHPSG   PS AD 
Sbjct: 62  LLLDNQHRLIEFKELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADK 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DHI++G +  VSF    +I
Sbjct: 122 RITTRLKEALALIDVQVLDHIVVG-ETCVSFAERGLI 157


>gi|317493871|ref|ZP_07952288.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918198|gb|EFV39540.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 159

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N LIA E    G+I    V+ RE+V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 63  LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSLADK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ+++  L  ++I V DH+I+G    +SF    ++
Sbjct: 123 TITQHLVQALQLVDIRVPDHLIVGGAQILSFAEHGLL 159


>gi|300923422|ref|ZP_07139463.1| DNA repair protein RadC domain protein [Escherichia coli MS 182-1]
 gi|300420332|gb|EFK03643.1| DNA repair protein RadC domain protein [Escherichia coli MS 182-1]
          Length = 128

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 32  IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 91

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 92  LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 128


>gi|320179974|gb|EFW54916.1| DNA repair protein RadC [Shigella boydii ATCC 9905]
          Length = 222

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS A  
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKAGK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 222


>gi|260432018|ref|ZP_05785989.1| DNA repair protein RadC [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415846|gb|EEX09105.1| DNA repair protein RadC [Silicibacter lacuscaerulensis ITI-1157]
          Length = 251

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/96 (53%), Positives = 72/96 (75%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD+ N+LIADE Q++GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS +DI+
Sbjct: 156 YLDRKNVLIADEEQAKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQSDID 215

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           MT  I      L + +HDH+IIGK   +SF+    +
Sbjct: 216 MTNRINDACAALGLTLHDHLIIGKSTELSFRSEGYL 251


>gi|254488973|ref|ZP_05102178.1| DNA repair protein RadC [Roseobacter sp. GAI101]
 gi|214045842|gb|EEB86480.1| DNA repair protein RadC [Roseobacter sp. GAI101]
          Length = 252

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/97 (53%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N++I DE Q +GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 156 LYLDRKNVIIGDEEQGKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQADI 215

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MTQ I+     L + +HDH+IIGK   +SF+    +
Sbjct: 216 DMTQQILGACTALGLTLHDHLIIGKSRELSFRSEGYL 252


>gi|227889744|ref|ZP_04007549.1| DNA repair protein RadC [Lactobacillus johnsonii ATCC 33200]
 gi|227849608|gb|EEJ59694.1| DNA repair protein RadC [Lactobacillus johnsonii ATCC 33200]
          Length = 203

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +IA+++  +GT++    + R+I +  +  ++T+  + HNHPSG+  PS  D+
Sbjct: 107 IYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDL 166

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ ++     + I   DH I+  + ++SF+   ++
Sbjct: 167 RFTKKLVEASKYMGIDFLDHFIVTDNTYLSFRETELL 203


>gi|28378902|ref|NP_785794.1| DNA repair protein [Lactobacillus plantarum WCFS1]
 gi|254557107|ref|YP_003063524.1| DNA repair protein [Lactobacillus plantarum JDM1]
 gi|300769705|ref|ZP_07079588.1| DNA repair protein [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308181103|ref|YP_003925231.1| DNA repair protein [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|28271739|emb|CAD64645.1| DNA repair protein [Lactobacillus plantarum WCFS1]
 gi|254046034|gb|ACT62827.1| DNA repair protein [Lactobacillus plantarum JDM1]
 gi|300492748|gb|EFK27933.1| DNA repair protein [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308046594|gb|ADN99137.1| DNA repair protein [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 211

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I  +V  +GT++  P   REI++  L      +++ HNHPSG+  PS  D+
Sbjct: 109 LCLDTKNQVIKRQVVFQGTLNSCPAQPREIIKVALTTPTARVVIAHNHPSGDVTPSKKDV 168

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +      + + + D  IIG + + SF    ++
Sbjct: 169 EFTKRLQLACELMGLPLLDSFIIGVNDYFSFAEQGVL 205


>gi|268319717|ref|YP_003293373.1| DNA repair protein RadC [Lactobacillus johnsonii FI9785]
 gi|262398092|emb|CAX67106.1| DNA repair protein RadC [Lactobacillus johnsonii FI9785]
          Length = 203

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +IA+++  +GT++    + R+I +  +  ++T+  + HNHPSG+  PS  D+
Sbjct: 107 IYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDL 166

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ ++     + I   DH I+  + ++SF+   ++
Sbjct: 167 RFTKKLVEASKCMGIDFLDHFIVTDNTYLSFRETELL 203


>gi|322835042|ref|YP_004215069.1| DNA repair protein RadC [Rahnella sp. Y9602]
 gi|321170243|gb|ADW75942.1| DNA repair protein RadC [Rahnella sp. Y9602]
          Length = 226

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    GTI HV VY REIV+  ++++A ++IL HNHPSG   PS  D 
Sbjct: 130 LFLDNQHRVIRHEEMFAGTIGHVEVYPREIVRGAMKVNAAALILAHNHPSGRAEPSLMDR 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II     L I V DH+++G    VSF     I
Sbjct: 190 KVTEQIIRACQLLEIRVLDHLVVGHGETVSFAERGWI 226


>gi|254511714|ref|ZP_05123781.1| DNA repair protein RadC [Rhodobacteraceae bacterium KLH11]
 gi|221535425|gb|EEE38413.1| DNA repair protein RadC [Rhodobacteraceae bacterium KLH11]
          Length = 251

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/96 (54%), Positives = 74/96 (77%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD+ N+LIADE Q++GT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS +DI+
Sbjct: 156 YLDRKNVLIADEEQAKGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQSDID 215

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           MT  I    + L + +HDH+IIGK A +SF+    +
Sbjct: 216 MTNRIQDACSALGLTLHDHLIIGKSAELSFRSHGYL 251


>gi|88858999|ref|ZP_01133640.1| associated with replication fork DNA repair protein
           [Pseudoalteromonas tunicata D2]
 gi|88819225|gb|EAR29039.1| associated with replication fork DNA repair protein
           [Pseudoalteromonas tunicata D2]
          Length = 245

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  ++   GTI+   VY RE+V+  L+++A ++I  HNHPSG   PS AD 
Sbjct: 149 LFLDNQNRLICQKILFYGTINAAAVYPREVVKEVLKMNANAVIFAHNHPSGIAEPSQADQ 208

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L+ +++ V DH+I+G +  VSF    ++
Sbjct: 209 VITRKLTQALSLIDVAVLDHLIVGGNQVVSFAERGLL 245


>gi|118578660|ref|YP_899910.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
 gi|118501370|gb|ABK97852.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
          Length = 163

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++  +  S G+++   V+ RE+ +     +A +I+LVHNHP+G+PNPS  DI
Sbjct: 67  LHLDGKNRIVCFDRVSIGSLNQAIVHPREVFKTACLSNAAAILLVHNHPTGDPNPSSEDI 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +  + + L I V DHII+G D F+SF    ++
Sbjct: 127 AITKRLKESGDILGIRVLDHIIVGDDEFLSFVERGLL 163


>gi|222111947|ref|YP_002554211.1| DNA repair protein Radc [Acidovorax ebreus TPSY]
 gi|254789648|sp|B9MEH2|Y2777_DIAST RecName: Full=UPF0758 protein Dtpsy_2777
 gi|221731391|gb|ACM34211.1| DNA repair protein RadC [Acidovorax ebreus TPSY]
          Length = 238

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGT+    VY RE+V R L   A +++L HNHPSG+  PS AD 
Sbjct: 142 LFLDSGNRLIAMEELFRGTLTQTSVYPREVVLRALHHHAAAVVLAHNHPSGSVQPSRADE 201

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH+I+   A +S     ++
Sbjct: 202 ALTQTLKAALALVDVRVLDHVIVAPGAALSMAEQGLV 238


>gi|322382581|ref|ZP_08056459.1| RadC-like protein [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153436|gb|EFX45843.1| RadC-like protein [Paenibacillus larvae subsp. larvae B-3650]
          Length = 209

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++A E  S G+++   V+ RE+ +  ++ S+ SII VHNHPSGNP PS  DI
Sbjct: 113 LFLNTKNQVLAKETMSIGSLNASIVHPREVFRAAIKRSSASIICVHNHPSGNPTPSLDDI 172

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +I     + I V DHIIIG  A+VS K    +
Sbjct: 173 DITQRLIEAGAIIGIDVLDHIIIGDKAYVSLKEQGYM 209


>gi|239817003|ref|YP_002945913.1| DNA repair protein RadC [Variovorax paradoxus S110]
 gi|259551914|sp|C5CWP0|Y4033_VARPS RecName: Full=UPF0758 protein Vapar_4033
 gi|239803580|gb|ACS20647.1| DNA repair protein RadC [Variovorax paradoxus S110]
          Length = 225

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E   RGT+    VY RE+V R L   A +++L HNHPSG+  PS AD 
Sbjct: 129 LFLDAQHRLIVLEELFRGTLTQTSVYPREVVTRALHHQAAAVVLSHNHPSGSIEPSRADE 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +   L+ +++ V DH+I+      S     ++
Sbjct: 189 SLTQTLRAALSLIDVRVLDHVIVSAGQSYSMAEKGLL 225


>gi|172046847|sp|Q12EY8|Y948_POLSJ RecName: Full=UPF0758 protein Bpro_0948
          Length = 224

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGT+    VY RE+V R L L+A S++L HNHPSG   PS AD 
Sbjct: 128 LFLDSQHRLIALEELFRGTLTQTSVYPREVVVRALALNAASVVLAHNHPSGAATPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + + L  +++ V DH ++     VS   L ++
Sbjct: 188 ALTQTLKSALALVDVRVLDHFVVTSTQAVSMAELGLL 224


>gi|254784439|ref|YP_003071867.1| DNA repair protein RadC [Teredinibacter turnerae T7901]
 gi|259551909|sp|C5BLG5|Y184_TERTT RecName: Full=UPF0758 protein TERTU_0184
 gi|237685002|gb|ACR12266.1| DNA repair protein RadC [Teredinibacter turnerae T7901]
          Length = 224

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L++ ++   GTID   VY RE+V++CL  +A ++I  HNHPSG   PS+AD 
Sbjct: 128 LFLDSQHRLLSFDILFNGTIDGAAVYPREVVKKCLAHNAAAVIFAHNHPSGVAEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  L+I   DHI++G+   VSF     +
Sbjct: 188 QITDRLCRALQLLDIRTLDHIVVGEGDAVSFADRGWL 224


>gi|304310173|ref|YP_003809771.1| DNA repair protein [gamma proteobacterium HdN1]
 gi|301795906|emb|CBL44107.1| DNA repair protein [gamma proteobacterium HdN1]
          Length = 224

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI       GT+D   VY RE+V+  L  +A ++I  HNHPSG   PS AD 
Sbjct: 128 LFLDSQHRLIQYRELFYGTLDSAAVYPREVVKEALRCNAGALIFAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +   L+ ++I V DH+++G    VS     ++
Sbjct: 188 SITLRLRDALSLVDIRVLDHLVVGDCEVVSLAARGML 224


>gi|73542417|ref|YP_296937.1| DNA repair protein RadC [Ralstonia eutropha JMP134]
 gi|123624203|sp|Q46XP0|Y2732_RALEJ RecName: Full=UPF0758 protein Reut_A2732
 gi|72119830|gb|AAZ62093.1| DNA repair protein RadC [Ralstonia eutropha JMP134]
          Length = 228

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 55/95 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +IA E   RGT++   VY RE+ +R L  +A S+I+ HNHPSG   PS +D+
Sbjct: 128 LFLDTRNRMIASEELFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCCTPSQSDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            MT+ +   L+ +++ + DH ++      SF    
Sbjct: 188 QMTRMLARALDLIDVRLLDHFVVAGTHVHSFAEHG 222


>gi|18311126|ref|NP_563060.1| DNA repair protein RadC [Clostridium perfringens str. 13]
 gi|168212819|ref|ZP_02638444.1| DNA repair protein, RadC family [Clostridium perfringens CPE str.
           F4969]
 gi|168215771|ref|ZP_02641396.1| DNA repair protein, RadC family [Clostridium perfringens NCTC 8239]
 gi|182623959|ref|ZP_02951747.1| DNA repair protein, RadC family [Clostridium perfringens D str.
           JGS1721]
 gi|25009030|sp|Q8XIH5|Y2144_CLOPE RecName: Full=UPF0758 protein CPE2144
 gi|18145809|dbj|BAB81850.1| DNA repair protein [Clostridium perfringens str. 13]
 gi|170715570|gb|EDT27752.1| DNA repair protein, RadC family [Clostridium perfringens CPE str.
           F4969]
 gi|177910852|gb|EDT73206.1| DNA repair protein, RadC family [Clostridium perfringens D str.
           JGS1721]
 gi|182382393|gb|EDT79872.1| DNA repair protein, RadC family [Clostridium perfringens NCTC 8239]
          Length = 227

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 57/95 (60%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +I+ +   +G ++   V+ REI +  ++ SA SII+ HNHPSG+P PS  DIN+
Sbjct: 133 LDTKNKVISKKEIFKGGLNSSLVHPREIFREAVKDSAASIIICHNHPSGDPTPSRDDINI 192

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T  +      + I + DH+IIG + F+S K   I+
Sbjct: 193 TTRLKECGKMMGIELLDHLIIGDNRFISLKEKDIL 227


>gi|21243995|ref|NP_643577.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|21109610|gb|AAM38113.1| RadC family protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 187

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/96 (42%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I+ E    GT+D   V+ R + +R LELSA ++IL HNHPSGNP PS+AD 
Sbjct: 91  VFLDNQHHIISTEHLFTGTVDGCDVHPRVVAKRALELSAAAVILFHNHPSGNPEPSEADR 150

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +   L+ L+I V DH++IG    VS      
Sbjct: 151 KVTERLKQALSLLDIRVLDHLVIGGQQHVSLASRGW 186


>gi|308047854|ref|YP_003911420.1| DNA repair protein RadC [Ferrimonas balearica DSM 9799]
 gi|307630044|gb|ADN74346.1| DNA repair protein RadC [Ferrimonas balearica DSM 9799]
          Length = 227

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + ++     SRGTID   VY RE+V+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 131 LLLDSQHRVLQTIELSRGTIDAAQVYPREVVKTALKANAAAVILAHNHPSGVAEPSQADR 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I   L  +++ V DH+++G+    SF     +
Sbjct: 191 HITGRIQQALALVDVSVLDHLVVGRGQSCSFAERGWL 227


>gi|322421682|ref|YP_004200905.1| DNA repair protein RadC [Geobacter sp. M18]
 gi|320128069|gb|ADW15629.1| DNA repair protein RadC [Geobacter sp. M18]
          Length = 231

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I     S G+++   V+ RE+    +  SA ++IL+HNHP+G+P PS  D+
Sbjct: 135 LLLDGKNRIITRAQISEGSLNQSIVHPREVFNAAVRQSAAAMILLHNHPTGDPTPSPEDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I V DHIIIG+DAF SF     +
Sbjct: 195 EVTRRLCEAGQLMGIRVLDHIIIGEDAFYSFADHGQL 231


>gi|254429018|ref|ZP_05042725.1| DNA repair protein RadC [Alcanivorax sp. DG881]
 gi|196195187|gb|EDX90146.1| DNA repair protein RadC [Alcanivorax sp. DG881]
          Length = 164

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  + +++ E    GTID   VY R +VQ+ L  +A ++I  HNHPSG   PS AD 
Sbjct: 68  IFLNNKHKVLSFEPLFNGTIDGAAVYPRVVVQQALACNAAAVIFAHNHPSGCCEPSQADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DH ++ +  +VS      +
Sbjct: 128 TITTRLKDALALIDVRVLDHFVVSRSEWVSLAQRGWL 164


>gi|107023439|ref|YP_621766.1| DNA repair protein RadC [Burkholderia cenocepacia AU 1054]
 gi|116690521|ref|YP_836144.1| DNA repair protein RadC [Burkholderia cenocepacia HI2424]
 gi|170733862|ref|YP_001765809.1| DNA repair protein RadC [Burkholderia cenocepacia MC0-3]
 gi|123244775|sp|Q1BUB2|Y1890_BURCA RecName: Full=UPF0758 protein Bcen_1890
 gi|171855185|sp|A0K9S4|Y2501_BURCH RecName: Full=UPF0758 protein Bcen2424_2501
 gi|238688599|sp|B1JXB2|Y2526_BURCC RecName: Full=UPF0758 protein Bcenmc03_2526
 gi|105893628|gb|ABF76793.1| DNA replication and repair protein RadC [Burkholderia cenocepacia
           AU 1054]
 gi|116648610|gb|ABK09251.1| DNA replication and repair protein RadC [Burkholderia cenocepacia
           HI2424]
 gi|169817104|gb|ACA91687.1| DNA repair protein RadC [Burkholderia cenocepacia MC0-3]
          Length = 257

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N LI  E  +RG++  + VY REIV+R ++ +A ++I+ HNHPSG   PS  D 
Sbjct: 161 VYLDARNRLIDMEEIARGSLTRMAVYPREIVRRAMKHNAAALIVAHNHPSGAVQPSAEDR 220

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G     SF     +
Sbjct: 221 RLTRVLKDALELVDVRLLDHVVVGVSDTFSFARAGWL 257


>gi|228993193|ref|ZP_04153114.1| DNA repair protein radC [Bacillus pseudomycoides DSM 12442]
 gi|228999243|ref|ZP_04158823.1| DNA repair protein radC [Bacillus mycoides Rock3-17]
 gi|229006790|ref|ZP_04164423.1| DNA repair protein radC [Bacillus mycoides Rock1-4]
 gi|228754412|gb|EEM03824.1| DNA repair protein radC [Bacillus mycoides Rock1-4]
 gi|228760440|gb|EEM09406.1| DNA repair protein radC [Bacillus mycoides Rock3-17]
 gi|228766519|gb|EEM15161.1| DNA repair protein radC [Bacillus pseudomycoides DSM 12442]
          Length = 225

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVMHRQTVFIGSLNASIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225


>gi|110800059|ref|YP_696822.1| DNA repair protein RadC [Clostridium perfringens ATCC 13124]
 gi|168208846|ref|ZP_02634471.1| DNA repair protein, RadC family [Clostridium perfringens B str.
           ATCC 3626]
 gi|123148570|sp|Q0TNG8|Y2399_CLOP1 RecName: Full=UPF0758 protein CPF_2399
 gi|110674706|gb|ABG83693.1| DNA repair protein, RadC family [Clostridium perfringens ATCC
           13124]
 gi|170713218|gb|EDT25400.1| DNA repair protein, RadC family [Clostridium perfringens B str.
           ATCC 3626]
          Length = 227

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 57/95 (60%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +I+ +   +G ++   V+ REI +  ++ SA SII+ HNHPSG+P PS  DIN+
Sbjct: 133 LDTKNKVISKKEIFKGGLNSSLVHPREIFREAVKDSAASIIICHNHPSGDPTPSRDDINI 192

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T  +      + I + DH+IIG + F+S K   I+
Sbjct: 193 TTRLKECGKMMGIELLDHLIIGDNRFISLKEKDIL 227


>gi|30249435|ref|NP_841505.1| DNA repair protein RadC [Nitrosomonas europaea ATCC 19718]
 gi|54036235|sp|Q82UL9|Y1464_NITEU RecName: Full=UPF0758 protein NE1464
 gi|30138798|emb|CAD85375.1| DNA repair protein radC family [Nitrosomonas europaea ATCC 19718]
          Length = 224

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  +  I  E    GT+    VY RE+V+R L  +A ++I  HNHPSG   PS AD 
Sbjct: 128 IFLDARHRTIVTEELFNGTLTQASVYPREVVKRALYHNAAAMIFAHNHPSGIAEPSTADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ++   L  +++ V DH +IG    VSF    +I
Sbjct: 188 ILTQSLKQALALVDVKVLDHFVIGSSEVVSFAERGLI 224


>gi|42518886|ref|NP_964816.1| DNA repair protein RadC [Lactobacillus johnsonii NCC 533]
 gi|41583172|gb|AAS08782.1| DNA repair protein RadC [Lactobacillus johnsonii NCC 533]
 gi|329667568|gb|AEB93516.1| DNA repair protein RadC [Lactobacillus johnsonii DPC 6026]
          Length = 203

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +IA+++  +GT++    + R+I +  +  ++T+  + HNHPSG+  PS  D+
Sbjct: 107 IYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDL 166

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ ++     + I   DH I+  + ++SF+   ++
Sbjct: 167 RFTKKLVEASKCMGIDFLDHFIVTDNTYLSFRETELL 203


>gi|77164149|ref|YP_342674.1| DNA repair protein RadC [Nitrosococcus oceani ATCC 19707]
 gi|254436177|ref|ZP_05049684.1| DNA repair protein RadC [Nitrosococcus oceani AFC27]
 gi|76882463|gb|ABA57144.1| DNA repair protein RadC [Nitrosococcus oceani ATCC 19707]
 gi|207089288|gb|EDZ66560.1| DNA repair protein RadC [Nitrosococcus oceani AFC27]
          Length = 171

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + +I      +GTID   VY R +VQ+ L ++A +++  HNHPSG   PS+AD 
Sbjct: 75  LYLDNRHRVIETVELFQGTIDGASVYPRVVVQQALSVNAAAVMFFHNHPSGVAEPSNADE 134

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I V DH ++     +SF    ++
Sbjct: 135 AITRRLKEALALVDIRVLDHFVVTAGESISFAERGLL 171


>gi|220929963|ref|YP_002506872.1| DNA repair protein RadC [Clostridium cellulolyticum H10]
 gi|220000291|gb|ACL76892.1| DNA repair protein RadC [Clostridium cellulolyticum H10]
          Length = 229

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N ++  E  S G+++   V+ RE+    ++    SII +HNHPSG+P PS  D+
Sbjct: 133 ILLDTKNKVLKTESISIGSLNASIVHPREVFSEAVKCGCNSIIFIHNHPSGDPTPSKEDL 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  +I   N L I V DHII+G   +VS K    I
Sbjct: 193 QTTDRLINAGNILGIKVLDHIILGDGRYVSLKEQGFI 229


>gi|110801616|ref|YP_699420.1| DNA repair protein RadC [Clostridium perfringens SM101]
 gi|122956547|sp|Q0SR37|Y2111_CLOPS RecName: Full=UPF0758 protein CPR_2111
 gi|110682117|gb|ABG85487.1| DNA repair protein, RadC family [Clostridium perfringens SM101]
          Length = 227

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 57/95 (60%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +I+ +   +G ++   V+ REI +  ++ SA SII+ HNHPSG+P PS  DIN+
Sbjct: 133 LDTKNKVISKKEIFKGGLNSSLVHPREIFKEAVKDSAASIIICHNHPSGDPTPSRDDINI 192

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T  +      + I + DH+IIG + F+S K   I+
Sbjct: 193 TTRLKECGKMMGIELLDHLIIGDNRFISLKEKDIL 227


>gi|330941093|gb|EGH43995.1| hypothetical protein PSYPI_16995 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 153

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 57  LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 116

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ V DH+I+G    +S     ++
Sbjct: 117 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVERGLM 153


>gi|307272661|ref|ZP_07553909.1| DNA repair protein RadC [Enterococcus faecalis TX0855]
 gi|306510656|gb|EFM79678.1| DNA repair protein RadC [Enterococcus faecalis TX0855]
          Length = 240

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 201 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 236


>gi|148266148|ref|YP_001232854.1| DNA repair protein RadC [Geobacter uraniireducens Rf4]
 gi|189029395|sp|A5G913|Y4138_GEOUR RecName: Full=UPF0758 protein Gura_4138
 gi|146399648|gb|ABQ28281.1| DNA replication and repair protein RadC [Geobacter uraniireducens
           Rf4]
          Length = 228

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++     S G+++   V+ RE+  + +  SA +IILVHNHP+G+P PS  DI
Sbjct: 132 LLLDGKNRILKRVQISEGSLNQSIVHPREVFNQAVRESAAAIILVHNHPTGDPTPSREDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +    + L I V DHIIIG  +F+SF    ++
Sbjct: 192 DITRRLREAGDLLGIKVLDHIIIGDGSFLSFVDRGMM 228


>gi|114569594|ref|YP_756274.1| DNA repair protein RadC [Maricaulis maris MCS10]
 gi|114340056|gb|ABI65336.1| DNA repair protein RadC [Maricaulis maris MCS10]
          Length = 226

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/97 (54%), Positives = 68/97 (70%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEV   GTIDH PVY RE+V+  L   A++IILVHNHPSG+  PS ADI
Sbjct: 130 LFLDRKNKLIADEVLGEGTIDHAPVYPREVVKSALAHEASAIILVHNHPSGDATPSQADI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ ++    P  I VHDH++IG++   SFK L ++
Sbjct: 190 EMTRTLMEICKPFEIAVHDHLVIGRENTASFKTLGLM 226


>gi|253576954|ref|ZP_04854278.1| DNA repair protein RadC [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843685|gb|EES71709.1| DNA repair protein RadC [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 162

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +++ EV S GT++   V+ RE+ +  +   A SII VHNHPSG+P PS  D 
Sbjct: 66  LILNTKNRILSKEVISIGTLNSAIVHPREVFKPAIIKGAASIICVHNHPSGDPAPSSEDK 125

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     + I V DH++IG + +VS K   +I
Sbjct: 126 KLTERLIQAGEIIGIDVLDHVVIGTEGYVSLKEQGMI 162


>gi|119475390|ref|ZP_01615743.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2143]
 gi|119451593|gb|EAW32826.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2143]
          Length = 224

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA +    GTID   +Y RE+V+ C++ +A ++I  HNHPSG   PS AD 
Sbjct: 128 LFLDSQHRVIAFDTLFYGTIDAACIYPREVVRCCMQHNAAAVIFAHNHPSGIAEPSQADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I  L  +++ V DH ++G    VSF    ++
Sbjct: 188 QITRRLIDALVLIDVRVLDHFVVGDGVLVSFAERGLL 224


>gi|328957163|ref|YP_004374549.1| DNA repair protein RadC [Carnobacterium sp. 17-4]
 gi|328673487|gb|AEB29533.1| DNA repair protein RadC [Carnobacterium sp. 17-4]
          Length = 230

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 54/95 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  E    G ++    + REI +  +  SA  +I+ HNHPSGNP PS+ADI
Sbjct: 134 LYLNTKNEIIKKETIFIGGLNSSIAHPREIFKGAVRYSAARMIVGHNHPSGNPEPSEADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
             T+ +      + I + DHIIIG+  F+S K + 
Sbjct: 194 QFTRRMSECGELMGIDLLDHIIIGEHEFISLKEIG 228


>gi|167465896|ref|ZP_02330985.1| RadC [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 145

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++A E  S G+++   V+ RE+ +  ++ S+ SII VHNHPSGNP PS  DI
Sbjct: 49  LFLNTKNQVLAKETMSIGSLNASIVHPREVFRAAIKRSSASIICVHNHPSGNPTPSLDDI 108

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +I     + I V DHIIIG  A+VS K    +
Sbjct: 109 DITQRLIEAGAIIGIDVLDHIIIGDKAYVSLKEQGYM 145


>gi|117620845|ref|YP_855621.1| putative DNA repair protein RadC [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562252|gb|ABK39200.1| putative DNA repair protein RadC [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 176

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A E    GT+    VY R++V++ L  +A +++LVHNHPSG P PS ADI
Sbjct: 80  LFLDNQHRVLAYEELFLGTLSAATVYPRDVVKQALHYNAAALMLVHNHPSGYPEPSRADI 139

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  ++I + DH+++G +  VS     +I
Sbjct: 140 AITLRLQNALALVDIRILDHLVVGTEGVVSLAERGLI 176


>gi|229593348|ref|YP_002875467.1| DNA repair protein RadC [Pseudomonas fluorescens SBW25]
 gi|259551894|sp|C3K471|Y5982_PSEFS RecName: Full=UPF0758 protein PFLU_5982
 gi|229365214|emb|CAY53505.1| DNA repair protein [Pseudomonas fluorescens SBW25]
          Length = 224

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E  S+GTID   VY R++V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 128 LFLDSRHRVLGFEALSQGTIDAAMVYPRQVVKRALAYNAAALILCHNHPSGSLEPSAADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DHII+G    +S      +
Sbjct: 188 KLTKLLQKALEVVDVRVLDHIIVGDGDPLSMAEYGWL 224


>gi|253991844|ref|YP_003043200.1| DNA repair protein RadC [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253783294|emb|CAQ86459.1| dna repair protein radc [Photorhabdus asymbiotica]
          Length = 230

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  E   +GTI+ V V+ REIV+  ++++A+SIIL HNHPSG+  PS AD 
Sbjct: 134 LFLNNQNKVICHEEMFKGTINKVEVHPREIVRSAIKVNASSIILAHNHPSGHAEPSLADK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +I   N + I V DH++IG+   VSF     I
Sbjct: 194 IVTDKVIDACNLVGIQVLDHLVIGRQCCVSFAERGWI 230


>gi|168205621|ref|ZP_02631626.1| DNA repair protein, RadC family [Clostridium perfringens E str.
           JGS1987]
 gi|169344220|ref|ZP_02865202.1| DNA repair protein, RadC family [Clostridium perfringens C str.
           JGS1495]
 gi|169297679|gb|EDS79779.1| DNA repair protein, RadC family [Clostridium perfringens C str.
           JGS1495]
 gi|170662943|gb|EDT15626.1| DNA repair protein, RadC family [Clostridium perfringens E str.
           JGS1987]
          Length = 227

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 57/95 (60%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +I+ +   +G ++   V+ REI +  ++ SA SII+ HNHPSG+P PS  DIN+
Sbjct: 133 LDTKNKVISKKEIFKGGLNSSLVHPREIFREAVKDSAASIIICHNHPSGDPTPSRDDINI 192

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T  +      + I + DH+IIG + F+S K   I+
Sbjct: 193 TTRLKECGKMMGIELLDHLIIGDNRFISLKEKDIL 227


>gi|39997266|ref|NP_953217.1| DNA repair protein RadC [Geobacter sulfurreducens PCA]
 gi|39984156|gb|AAR35544.1| DNA repair protein RadC [Geobacter sulfurreducens PCA]
          Length = 163

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++  +  S G+++   V+ RE+ +     +A +I+LVHNHP+G+PNPS  DI
Sbjct: 67  LHLDGKNRIVCFDRVSIGSLNQAIVHPREVFKTACLSNAAAILLVHNHPTGDPNPSSEDI 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +  + + L I V DHII+G D F+SF    ++
Sbjct: 127 AITKRLKESGDILGIRVLDHIIVGDDEFLSFVEQGLL 163


>gi|30995411|ref|NP_439113.2| DNA repair protein RadC [Haemophilus influenzae Rd KW20]
 gi|38372879|sp|P44952|Y952_HAEIN RecName: Full=UPF0758 protein HI_0952
          Length = 221

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI    VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTIYVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 185 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 221


>gi|302037875|ref|YP_003798197.1| DNA repair protein RadC-like protein [Candidatus Nitrospira
           defluvii]
 gi|300605939|emb|CBK42272.1| DNA repair protein RadC homolog [Candidatus Nitrospira defluvii]
          Length = 238

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +I D   S G++    V+ RE+    +  SA  +I +HNHPSG+P PS  D 
Sbjct: 135 VLLDAKNQVIRDVTISEGSLTLSIVHPREVFIPAMRASAAGVIFLHNHPSGDPTPSQEDR 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +++  + L I V DH+I+G   +VSF     +
Sbjct: 195 VLTARLVSAGSLLGIQVLDHLIVGDGRYVSFADQGWL 231


>gi|77361558|ref|YP_341133.1| associated with replication fork DNA repair protein
           [Pseudoalteromonas haloplanktis TAC125]
 gi|123587696|sp|Q3IFE5|Y2643_PSEHT RecName: Full=UPF0758 protein PSHAa2643
 gi|76876469|emb|CAI87691.1| associated with replication fork DNA repair protein
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 224

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI DE+   GTI+   VY RE+V+  L+ +A ++I  HNHPSG   PS AD 
Sbjct: 128 LYLDSQNRLIKDEILFYGTINSASVYPREVVKAALKNNAAAVIFAHNHPSGIAEPSQADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  ++I V DHII+G +  VSF    +I
Sbjct: 188 LITNKLQQALQLVDINVLDHIIVGGETCVSFAERGLI 224


>gi|257874771|ref|ZP_05654424.1| DNA repair protein RadC [Enterococcus casseliflavus EC20]
 gi|257808937|gb|EEV37757.1| DNA repair protein RadC [Enterococcus casseliflavus EC20]
          Length = 230

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++    + REI    +  SA  +I+VHNHPSG+P  S+AD+
Sbjct: 129 LYLNTKNEIIQKKTIFIGSLNQSIAHPREIFHWAVRYSAARVIVVHNHPSGSPQASEADL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +I   + + I + DH+IIG +A+VS +   +
Sbjct: 189 LFTRRLIKCGDLMGIDILDHLIIGDNAYVSLREEGL 224


>gi|257865156|ref|ZP_05644809.1| DNA repair protein RadC [Enterococcus casseliflavus EC30]
 gi|257871480|ref|ZP_05651133.1| DNA repair protein RadC [Enterococcus casseliflavus EC10]
 gi|257799090|gb|EEV28142.1| DNA repair protein RadC [Enterococcus casseliflavus EC30]
 gi|257805644|gb|EEV34466.1| DNA repair protein RadC [Enterococcus casseliflavus EC10]
          Length = 230

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++    + REI    +  SA  +I+VHNHPSG+P  S+AD+
Sbjct: 129 LYLNTKNEIIQKKTIFIGSLNQSIAHPREIFHWAVRYSAARVIVVHNHPSGSPQASEADL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +I   + + I + DH+IIG +A+VS +   +
Sbjct: 189 LFTRRLIKCGDLMGIDILDHLIIGDNAYVSLREEGL 224


>gi|121595744|ref|YP_987640.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|171769520|sp|A1WBD9|Y3450_ACISJ RecName: Full=UPF0758 protein Ajs_3450
 gi|120607824|gb|ABM43564.1| DNA replication and repair protein RadC [Acidovorax sp. JS42]
          Length = 238

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   RGT+    VY RE+V R L   A +++L HNHPSG+  PS AD 
Sbjct: 142 LFLDSGNRLIAMEELFRGTLTQTSVYPREVVLRALHHHAAAVVLAHNHPSGSVQPSRADE 201

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH+I+   A +S     ++
Sbjct: 202 ALTQTLKAALALVDVRVLDHVIVAPGAALSMAEQGLV 238


>gi|307278557|ref|ZP_07559629.1| DNA repair protein RadC [Enterococcus faecalis TX0860]
 gi|306504794|gb|EFM73992.1| DNA repair protein RadC [Enterococcus faecalis TX0860]
          Length = 240

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 201 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 236


>gi|229547599|ref|ZP_04436324.1| DNA repair protein RadC [Enterococcus faecalis TX1322]
 gi|229548193|ref|ZP_04436918.1| DNA repair protein RadC [Enterococcus faecalis ATCC 29200]
 gi|307275090|ref|ZP_07556244.1| DNA repair protein RadC [Enterococcus faecalis TX2134]
 gi|307287379|ref|ZP_07567438.1| DNA repair protein RadC [Enterococcus faecalis TX0109]
 gi|312952214|ref|ZP_07771092.1| DNA repair protein RadC [Enterococcus faecalis TX0102]
 gi|229306672|gb|EEN72668.1| DNA repair protein RadC [Enterococcus faecalis ATCC 29200]
 gi|229307289|gb|EEN73276.1| DNA repair protein RadC [Enterococcus faecalis TX1322]
 gi|306501552|gb|EFM70848.1| DNA repair protein RadC [Enterococcus faecalis TX0109]
 gi|306508208|gb|EFM77324.1| DNA repair protein RadC [Enterococcus faecalis TX2134]
 gi|310629870|gb|EFQ13153.1| DNA repair protein RadC [Enterococcus faecalis TX0102]
 gi|315028140|gb|EFT40072.1| DNA repair protein RadC [Enterococcus faecalis TX2137]
 gi|315030879|gb|EFT42811.1| DNA repair protein RadC [Enterococcus faecalis TX4000]
 gi|315032296|gb|EFT44228.1| DNA repair protein RadC [Enterococcus faecalis TX0017]
 gi|315036225|gb|EFT48157.1| DNA repair protein RadC [Enterococcus faecalis TX0027]
 gi|315148798|gb|EFT92814.1| DNA repair protein RadC [Enterococcus faecalis TX4244]
 gi|315154537|gb|EFT98553.1| DNA repair protein RadC [Enterococcus faecalis TX0031]
 gi|315160102|gb|EFU04119.1| DNA repair protein RadC [Enterococcus faecalis TX0312]
 gi|315163278|gb|EFU07295.1| DNA repair protein RadC [Enterococcus faecalis TX0645]
 gi|315165917|gb|EFU09934.1| DNA repair protein RadC [Enterococcus faecalis TX1302]
 gi|315169324|gb|EFU13341.1| DNA repair protein RadC [Enterococcus faecalis TX1341]
 gi|315171821|gb|EFU15838.1| DNA repair protein RadC [Enterococcus faecalis TX1342]
 gi|327536079|gb|AEA94913.1| DNA repair protein RadC [Enterococcus faecalis OG1RF]
          Length = 240

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 201 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 236


>gi|300714649|ref|YP_003739452.1| DNA repair protein RadC [Erwinia billingiae Eb661]
 gi|299060485|emb|CAX57592.1| DNA repair protein RadC [Erwinia billingiae Eb661]
          Length = 222

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 54/96 (56%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FLD  + +I       GT++ V V+ REIV+  L  +A ++IL HNHPSG   PS AD  
Sbjct: 127 FLDNQHRMIHACEMFAGTLNSVEVHPREIVKEALAKNAAALILAHNHPSGVARPSRADHQ 186

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ I+     +NI V DHI+IG    VSF     I
Sbjct: 187 VTRRIVAACQLMNIHVLDHIVIGHGESVSFAERGWI 222


>gi|187933370|ref|YP_001884766.1| DNA repair protein RadC [Clostridium botulinum B str. Eklund 17B]
 gi|238691627|sp|B2TK55|Y562_CLOBB RecName: Full=UPF0758 protein CLL_A0562
 gi|187721523|gb|ACD22744.1| DNA repair protein RadC [Clostridium botulinum B str. Eklund 17B]
          Length = 229

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  NI+I  +   +G+++   V+ REI +  +  S+  II+ HNHPSG+P PS  DI
Sbjct: 133 IFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSAKIIISHNHPSGDPTPSKEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  I      + I + DHIIIGK+ F+S K    I
Sbjct: 193 NITLRIKECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229


>gi|126172629|ref|YP_001048778.1| DNA repair protein RadC [Shewanella baltica OS155]
 gi|160873513|ref|YP_001552829.1| DNA repair protein RadC [Shewanella baltica OS195]
 gi|217971608|ref|YP_002356359.1| DNA repair protein RadC [Shewanella baltica OS223]
 gi|304411668|ref|ZP_07393280.1| DNA repair protein RadC [Shewanella baltica OS183]
 gi|307306280|ref|ZP_07586025.1| DNA repair protein RadC [Shewanella baltica BA175]
 gi|166218793|sp|A3CZJ6|Y377_SHEB5 RecName: Full=UPF0758 protein Sbal_0377
 gi|189029402|sp|A9KY04|Y388_SHEB9 RecName: Full=UPF0758 protein Sbal195_0388
 gi|254789658|sp|B8E4J5|Y402_SHEB2 RecName: Full=UPF0758 protein Sbal223_0402
 gi|125995834|gb|ABN59909.1| DNA repair protein RadC [Shewanella baltica OS155]
 gi|160859035|gb|ABX47569.1| DNA repair protein RadC [Shewanella baltica OS195]
 gi|217496743|gb|ACK44936.1| DNA repair protein RadC [Shewanella baltica OS223]
 gi|304349856|gb|EFM14262.1| DNA repair protein RadC [Shewanella baltica OS183]
 gi|306911153|gb|EFN41580.1| DNA repair protein RadC [Shewanella baltica BA175]
 gi|315265742|gb|ADT92595.1| DNA repair protein RadC [Shewanella baltica OS678]
          Length = 225

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|254430046|ref|ZP_05043753.1| DNA repair protein RadC [Alcanivorax sp. DG881]
 gi|196196215|gb|EDX91174.1| DNA repair protein RadC [Alcanivorax sp. DG881]
          Length = 164

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  + +++ E    GTID   VY R IVQ+ L  +A ++I  HNHPSG   PS AD 
Sbjct: 68  IFLNNKHKVLSFETLFTGTIDGAAVYPRVIVQQALACNAAAVIFSHNHPSGCCEPSRADQ 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH ++ +  +VS     ++
Sbjct: 128 QITKRLTDALALIDVRVLDHFVVSRSEWVSLAERGMV 164


>gi|319654832|ref|ZP_08008908.1| hypothetical protein HMPREF1013_05530 [Bacillus sp. 2_A_57_CT2]
 gi|317393550|gb|EFV74312.1| hypothetical protein HMPREF1013_05530 [Bacillus sp. 2_A_57_CT2]
          Length = 218

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N++I  +   +G+++   V+ REI +  ++LSA SII  HNHPSG+P PS  DI
Sbjct: 121 LFLNSKNVVIGRKTIFKGSLNASIVHPREIFREAVKLSAASIIAGHNHPSGDPYPSREDI 180

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRI 96
            +T+ +      + I + DHIIIG    F S K    
Sbjct: 181 EVTKRLSEAGKLVGIDLLDHIIIGHHGNFTSLKEKGY 217


>gi|237797777|ref|ZP_04586238.1| hypothetical protein POR16_02922 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331020627|gb|EGI00684.1| hypothetical protein POR16_02922 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 224

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R L  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMNFEILFRGTINASYVHPRQVVKRALAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ V DH+I+G    +S     ++
Sbjct: 188 DLTKRLKEALLLVDVHVLDHVIVGDGEPLSMVERGLM 224


>gi|66043492|ref|YP_233333.1| DNA repair protein RadC [Pseudomonas syringae pv. syringae B728a]
 gi|75503901|sp|Q4ZZX7|Y222_PSEU2 RecName: Full=UPF0758 protein Psyr_0222
 gi|63254199|gb|AAY35295.1| DNA repair protein RadC [Pseudomonas syringae pv. syringae B728a]
 gi|330972197|gb|EGH72263.1| hypothetical protein PSYAR_17040 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 224

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ V DH+I+G    +S     ++
Sbjct: 188 DLTKRLKEALLLVDVHVLDHVIVGDGEPLSMVERGLM 224


>gi|49474229|ref|YP_032271.1| DNA repair protein radC [Bartonella quintana str. Toulouse]
 gi|49239733|emb|CAF26115.1| DNA repair protein radC [Bartonella quintana str. Toulouse]
          Length = 264

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N L+ADEVQ  GTIDH PVY RE++ R L+LSA+ +ILVHNHPSG+ +PS+ADI
Sbjct: 168 LFLDKKNGLLADEVQQTGTIDHTPVYPREVISRALQLSASGLILVHNHPSGDSSPSEADI 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +    N L I VHDH+IIG++ + SFK L+ I
Sbjct: 228 TMTHRLKDAANALGITVHDHLIIGRNNYTSFKALKFI 264


>gi|300310517|ref|YP_003774609.1| DNA repair RadC-like protein [Herbaspirillum seropedicae SmR1]
 gi|300073302|gb|ADJ62701.1| DNA repair RadC-like protein [Herbaspirillum seropedicae SmR1]
          Length = 224

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI  E   +GT+    VY RE+++  L  +A S+IL HNHPSG+P PSD D+
Sbjct: 128 LFLDVRNKLIGTEELFKGTLTQSAVYPREVIKAALRHNAASVILAHNHPSGDPEPSDHDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T  +   L  ++I + DH ++      SF    
Sbjct: 188 RLTAALDEALQMMDIRLLDHFVVAGTRLYSFADHG 222


>gi|288553589|ref|YP_003425524.1| DNA repair protein RadC [Bacillus pseudofirmus OF4]
 gi|288544749|gb|ADC48632.1| DNA repair protein RadC [Bacillus pseudofirmus OF4]
          Length = 230

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G+++   V+ RE+ +  L  SA SII +HNHPSG+P PS  DI
Sbjct: 133 LYLNTKNRVIHRHTLFIGSLNASIVHPREVFKEALRRSAASIICLHNHPSGDPTPSLEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L + + DH+IIG   F+S K    I
Sbjct: 193 EVTKRLNEAGKVLGVELLDHVIIGDRKFISLKEQGHI 229


>gi|258511792|ref|YP_003185226.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478518|gb|ACV58837.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 233

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + ++A++  S G++D   V+ REI +R + +SA+SI+ +HNHPSG+P+PS  DI
Sbjct: 133 LLLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSPSPEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L I V DHI+IG   FVS +    +
Sbjct: 193 AVTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229


>gi|260893389|ref|YP_003239486.1| DNA repair protein RadC [Ammonifex degensii KC4]
 gi|260865530|gb|ACX52636.1| DNA repair protein RadC [Ammonifex degensii KC4]
          Length = 232

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+  E  + G ++   V  RE+ +  +  SA ++ILVHNHPSG+P PS  D+
Sbjct: 136 ILLDTKNQLLGIETVAVGGLNSAGVLPREVFRAAVRRSACALILVHNHPSGDPTPSGEDL 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ ++   + L I V DH+IIG + +VS K   +
Sbjct: 196 ALTRRLVQAGDLLGIEVLDHLIIGDNCYVSLKEANL 231


>gi|120597169|ref|YP_961743.1| DNA repair protein RadC [Shewanella sp. W3-18-1]
 gi|146291569|ref|YP_001181993.1| DNA repair protein RadC [Shewanella putrefaciens CN-32]
 gi|166218795|sp|A4Y2L1|Y462_SHEPC RecName: Full=UPF0758 protein Sputcn32_0462
 gi|166218797|sp|A1REU4|Y338_SHESW RecName: Full=UPF0758 protein Sputw3181_0338
 gi|120557262|gb|ABM23189.1| DNA repair protein RadC [Shewanella sp. W3-18-1]
 gi|145563259|gb|ABP74194.1| DNA repair protein RadC [Shewanella putrefaciens CN-32]
 gi|319424742|gb|ADV52816.1| DNA repair protein RadC [Shewanella putrefaciens 200]
          Length = 225

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|309751380|gb|ADO81364.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
          Length = 221

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 125 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I  +   + I V DH+I+GK    SF    ++
Sbjct: 185 LITKKIQESAELMEIRVLDHLIVGKTDCYSFAENFLL 221


>gi|315156406|gb|EFU00423.1| DNA repair protein RadC [Enterococcus faecalis TX0043]
          Length = 240

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 201 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 236


>gi|293382175|ref|ZP_06628118.1| DNA repair protein RadC [Enterococcus faecalis R712]
 gi|293388514|ref|ZP_06633018.1| DNA repair protein RadC [Enterococcus faecalis S613]
 gi|312905730|ref|ZP_07764752.1| DNA repair protein RadC [Enterococcus faecalis DAPTO 512]
 gi|312909075|ref|ZP_07767935.1| DNA repair protein RadC [Enterococcus faecalis DAPTO 516]
 gi|291080458|gb|EFE17822.1| DNA repair protein RadC [Enterococcus faecalis R712]
 gi|291082118|gb|EFE19081.1| DNA repair protein RadC [Enterococcus faecalis S613]
 gi|310628209|gb|EFQ11492.1| DNA repair protein RadC [Enterococcus faecalis DAPTO 512]
 gi|311290637|gb|EFQ69193.1| DNA repair protein RadC [Enterococcus faecalis DAPTO 516]
          Length = 240

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 201 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 236


>gi|289209451|ref|YP_003461517.1| DNA repair protein RadC [Thioalkalivibrio sp. K90mix]
 gi|288945082|gb|ADC72781.1| DNA repair protein RadC [Thioalkalivibrio sp. K90mix]
          Length = 242

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E   RGTID   V+ RE+V+R L  +A ++IL HNHPSG   PS +DI
Sbjct: 147 LFLDNRHRVIAFEELFRGTIDGAAVHPREVVRRVLHHNAAAVILAHNHPSGVAEPSGSDI 206

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH++I     VS     ++
Sbjct: 207 AITRRLTEALGLVDVRILDHVVIAD-TPVSMAERGLL 242


>gi|149202958|ref|ZP_01879929.1| DNA repair protein RadC [Roseovarius sp. TM1035]
 gi|149143504|gb|EDM31540.1| DNA repair protein RadC [Roseovarius sp. TM1035]
          Length = 251

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/96 (58%), Positives = 75/96 (78%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD+ NILIADE Q+RGTIDHVPVY RE+V+R L L+A+++ILVHNHPSG+P PS ADI+
Sbjct: 156 YLDRKNILIADEEQARGTIDHVPVYPREVVKRALHLNASALILVHNHPSGDPTPSAADIS 215

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           MT+ + T    L + +HDHI+IGK + VSF+    +
Sbjct: 216 MTRQVQTAAEALGLTLHDHIVIGKSSEVSFRSSGFL 251


>gi|145638225|ref|ZP_01793835.1| DNA repair protein RadC [Haemophilus influenzae PittII]
 gi|145272554|gb|EDK12461.1| DNA repair protein RadC [Haemophilus influenzae PittII]
          Length = 214

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 118 LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I  +   + I V DH+I+GK    SF    ++
Sbjct: 178 LITKKIQESAELMEIRVLDHLIVGKTDCYSFAENFLL 214


>gi|90422099|ref|YP_530469.1| DNA repair protein RadC [Rhodopseudomonas palustris BisB18]
 gi|90104113|gb|ABD86150.1| DNA repair protein RadC [Rhodopseudomonas palustris BisB18]
          Length = 242

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/97 (67%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GTIDH PVY REIV+R LELSAT+II+VHNHPSG+P PS +DI
Sbjct: 146 LFLDKRNQLIADELQQVGTIDHTPVYPREIVKRALELSATAIIMVHNHPSGDPTPSQSDI 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II    PL I VHDHII+GK    S KGL++I
Sbjct: 206 TMTKQIIDIAKPLGIAVHDHIIVGKHGHASLKGLKLI 242


>gi|83858758|ref|ZP_00952280.1| DNA repair protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853581|gb|EAP91433.1| DNA repair protein [Oceanicaulis alexandrii HTCC2633]
          Length = 213

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/97 (57%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LDK N L+ADE Q+RGT+DH PVY RE+V+R L L A+++ILVHNHPSG+P PS ADI
Sbjct: 117 LYLDKKNRLVADEHQARGTVDHAPVYPREVVKRALALDASALILVHNHPSGDPTPSHADI 176

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +I+   P NI+VHDH++IG++   SFK L ++
Sbjct: 177 EMTKLVISAAKPFNIVVHDHLVIGRERTASFKSLGLL 213


>gi|317154521|ref|YP_004122569.1| DNA repair protein RadC [Desulfovibrio aespoeensis Aspo-2]
 gi|316944772|gb|ADU63823.1| DNA repair protein RadC [Desulfovibrio aespoeensis Aspo-2]
          Length = 227

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 57/96 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           F+D  N +IA E  S+GT+D  PV+ REI+   L L A ++IL HNHP G+P PS  D++
Sbjct: 132 FMDSKNRVIAWEQVSKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPTPSREDLD 191

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ I  T   L I + DHII+    + SF     +
Sbjct: 192 LTRRIRDTAQGLGIRILDHIIVTDHEYYSFNEHGRL 227


>gi|317493712|ref|ZP_07952129.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918039|gb|EFV39381.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 159

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N L+A E    G+I    V+ RE+V+R L  +A ++IL HNHPSG+  PS +D 
Sbjct: 63  LYLNHQNQLLAWETLFTGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDIAPSQSDK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +I  L  +++ V DH I+G     SF    ++
Sbjct: 123 VITQRLIQALGLVDVRVLDHFIVGGRHIASFAENGLL 159


>gi|187731500|ref|YP_001882335.1| DNA repair protein RadC [Shigella boydii CDC 3083-94]
 gi|238691678|sp|B2TTV2|YICR_SHIB3 RecName: Full=UPF0758 protein yicR
 gi|187428492|gb|ACD07766.1| DNA repair protein RadC [Shigella boydii CDC 3083-94]
          Length = 222

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 126 IFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II +   +++ V DHI+IG+   VSF     I
Sbjct: 186 LITERIIKSCQFMDLRVLDHIVIGRGENVSFAERGWI 222


>gi|330720900|gb|EGG99083.1| DNA repair protein RadC [gamma proteobacterium IMCC2047]
          Length = 97

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          ++LD  + LI  +    GTID   VY RE+V+  +E +A ++IL HNHPSG   PS AD 
Sbjct: 1  MYLDSQHRLIRYQPHFYGTIDSASVYPRELVKSAIEYNAAAVILAHNHPSGVAEPSQADR 60

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ +   ++ + + V DH+++G    VSF     +
Sbjct: 61 QITEQVRKAMSLIGVRVLDHMVVGDSEVVSFAERGWL 97


>gi|119773468|ref|YP_926208.1| DNA repair protein RadC [Shewanella amazonensis SB2B]
 gi|166218792|sp|A1S2D2|Y327_SHEAM RecName: Full=UPF0758 protein Sama_0327
 gi|119765968|gb|ABL98538.1| DNA repair protein RadC [Shewanella amazonensis SB2B]
          Length = 225

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDAASVYPRELVSLVLEKRAAAVIVCHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|118593437|ref|ZP_01550817.1| DNA repair protein RadC [Stappia aggregata IAM 12614]
 gi|118433916|gb|EAV40574.1| DNA repair protein RadC [Stappia aggregata IAM 12614]
          Length = 237

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/97 (63%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+++R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 141 LFLDKKNALIADEVQQTGTVDHTPVYPREVIRRALELSATALILVHNHPSGDPTPSRADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I+    PL I VHDHII+G  + VSF+ L++I
Sbjct: 201 QMTKKIVDIAGPLGIEVHDHIIVGLRSNVSFRSLQLI 237


>gi|56475704|ref|YP_157293.1| RadC family DNA repair protein [Aromatoleum aromaticum EbN1]
 gi|56311747|emb|CAI06392.1| DNA repair protein similar to radC family [Aromatoleum aromaticum
           EbN1]
          Length = 196

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LI  E   RGT+    VY REIV+R LEL A  +I  H HPSG   PS AD 
Sbjct: 100 LYLNARNHLILAEEAFRGTLTQTSVYPREIVRRALELRAAGVIFSHQHPSGACEPSLADE 159

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + + L  + + V DH ++   + VSF    ++
Sbjct: 160 LLTRTLTSALAMVEVRVLDHFVVAGHSTVSFAERGLL 196


>gi|206890013|ref|YP_002248228.1| DNA repair protein [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741951|gb|ACI21008.1| DNA repair protein [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 224

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 55/95 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    LI +   S GT++   ++ RE+ +  ++ SA ++IL+HNHPSG+P PS+ DI
Sbjct: 128 LLLDTKLRLIREVKVSEGTLNQSLIHPREVFKDAVKESAYAVILIHNHPSGDPTPSEQDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +      L I + DH+IIG   + S K   
Sbjct: 188 EITKKLKKASEILEIPILDHVIIGSGKYFSMKERG 222


>gi|293400888|ref|ZP_06645033.1| DNA repair protein RadC [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305914|gb|EFE47158.1| DNA repair protein RadC [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 225

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N ++       GT+    V+ REI +  ++     II VHNHPSG+  PSDADI
Sbjct: 128 LFLDQRNHVLCYRTMFMGTLTSASVHPREIFKEAMQQGCAKIICVHNHPSGDATPSDADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I + DHII+ ++ ++SF+  R++
Sbjct: 188 TLTKAIQEAGKMVAIPLIDHIIVARNTYISFRQKRLM 224


>gi|255970845|ref|ZP_05421431.1| DNA repair protein RadC [Enterococcus faecalis T1]
 gi|256761220|ref|ZP_05501800.1| DNA repair protein RadC [Enterococcus faecalis T3]
 gi|255961863|gb|EET94339.1| DNA repair protein RadC [Enterococcus faecalis T1]
 gi|256682471|gb|EEU22166.1| DNA repair protein RadC [Enterococcus faecalis T3]
          Length = 227

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 128 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 188 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 223


>gi|89902021|ref|YP_524492.1| DNA repair protein RadC [Rhodoferax ferrireducens T118]
 gi|122478527|sp|Q21TE2|Y3252_RHOFD RecName: Full=UPF0758 protein Rfer_3252
 gi|89346758|gb|ABD70961.1| DNA repair protein RadC [Rhodoferax ferrireducens T118]
          Length = 234

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V R L   A+S++L HNHPSG   PS AD 
Sbjct: 138 LFLDVQNRLLALEELFRGTLTQTSVYPREVVLRALHHQASSVVLAHNHPSGTVQPSRADE 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + TTL  +++ V DH+I+     +S     ++
Sbjct: 198 MLTQTLKTTLALIDVRVLDHVIVAPGEALSMAERGLL 234


>gi|255974420|ref|ZP_05425006.1| DNA repair protein RadC [Enterococcus faecalis T2]
 gi|255967292|gb|EET97914.1| DNA repair protein RadC [Enterococcus faecalis T2]
          Length = 227

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 128 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 188 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 223


>gi|313903989|ref|ZP_07837369.1| DNA repair protein RadC [Eubacterium cellulosolvens 6]
 gi|313471138|gb|EFR66460.1| DNA repair protein RadC [Eubacterium cellulosolvens 6]
          Length = 236

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+ +   SRGT++   +  RE+    L   A S+ILVHNHPSG+P+PS  D 
Sbjct: 136 VMLDTKNHLLGEAEISRGTVNQSLISPRELFLSALSFHAVSVILVHNHPSGDPSPSGDDQ 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ I      L I + DHIIIG   + SF    ++
Sbjct: 196 DVTERIRCAGELLGIRLVDHIIIGDGEYFSFMEHGLL 232


>gi|254439250|ref|ZP_05052744.1| DNA repair protein RadC [Octadecabacter antarcticus 307]
 gi|198254696|gb|EDY79010.1| DNA repair protein RadC [Octadecabacter antarcticus 307]
          Length = 266

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q  GT+DHVPVY RE+V+R LEL+A+S+ILVHNHPSG+P PS+ DI
Sbjct: 170 LFLDRKNVLIADEAQGNGTVDHVPVYPREVVKRALELNASSLILVHNHPSGDPTPSNEDI 229

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      LNI +HDH+IIG+   +SFK   +I
Sbjct: 230 AMTMQIHDAAKALNISLHDHLIIGRSRELSFKSQGLI 266


>gi|218290834|ref|ZP_03494903.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius LAA1]
 gi|218239192|gb|EED06393.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius LAA1]
          Length = 233

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + ++A++  S G++D   V+ REI +R + +SA+SI+ +HNHPSG+P+PS  DI
Sbjct: 133 LLLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSPSPEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L I V DHI+IG   FVS +    +
Sbjct: 193 AVTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229


>gi|293392460|ref|ZP_06636780.1| DNA repair protein RadC [Serratia odorifera DSM 4582]
 gi|291424862|gb|EFE98071.1| DNA repair protein RadC [Serratia odorifera DSM 4582]
          Length = 159

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+A E    GTI+   V+ RE+V+  ++ +A S +L HNHPS    PS AD 
Sbjct: 63  LWLDNQNRLLAQETLFTGTINSTTVHPRELVKSAMKHNAASAVLAHNHPSQLAEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I T L  +++ V DH+++G    VSF     +
Sbjct: 123 QITDRIKTALQLVDVRVVDHLVVGGLDIVSFAERGWL 159


>gi|146306213|ref|YP_001186678.1| DNA repair protein RadC [Pseudomonas mendocina ymp]
 gi|145574414|gb|ABP83946.1| DNA repair protein RadC [Pseudomonas mendocina ymp]
          Length = 165

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I+ E   RGT+D   VY RE+V+  L  +A ++ILVHNHPSG+P+PS ADI
Sbjct: 69  LLLDSKHRVISFEELFRGTLDAASVYPREVVKTVLAHNAAAVILVHNHPSGDPSPSQADI 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +     DH I+G +  VS     ++
Sbjct: 129 RLTQTLKNALVMVGTTTLDHFIVGSEGIVSLAEQGLL 165


>gi|227518208|ref|ZP_03948257.1| DNA repair protein RadC [Enterococcus faecalis TX0104]
 gi|256618290|ref|ZP_05475136.1| DNA repair protein RadC [Enterococcus faecalis ATCC 4200]
 gi|256852483|ref|ZP_05557859.1| DNA repair protein RadC [Enterococcus faecalis T8]
 gi|256958161|ref|ZP_05562332.1| DNA repair protein RadC [Enterococcus faecalis DS5]
 gi|257077434|ref|ZP_05571795.1| DNA repair protein RadC [Enterococcus faecalis JH1]
 gi|257088067|ref|ZP_05582428.1| DNA repair protein RadC [Enterococcus faecalis D6]
 gi|257091146|ref|ZP_05585507.1| DNA repair protein radC [Enterococcus faecalis CH188]
 gi|257417093|ref|ZP_05594087.1| DNA repair protein RadC [Enterococcus faecalis AR01/DG]
 gi|257417807|ref|ZP_05594801.1| DNA repair protein radC [Enterococcus faecalis T11]
 gi|294779645|ref|ZP_06745036.1| DNA repair protein RadC [Enterococcus faecalis PC1.1]
 gi|300860938|ref|ZP_07107025.1| DNA repair protein RadC [Enterococcus faecalis TUSoD Ef11]
 gi|227074364|gb|EEI12327.1| DNA repair protein RadC [Enterococcus faecalis TX0104]
 gi|256597817|gb|EEU16993.1| DNA repair protein RadC [Enterococcus faecalis ATCC 4200]
 gi|256712337|gb|EEU27369.1| DNA repair protein RadC [Enterococcus faecalis T8]
 gi|256948657|gb|EEU65289.1| DNA repair protein RadC [Enterococcus faecalis DS5]
 gi|256985464|gb|EEU72766.1| DNA repair protein RadC [Enterococcus faecalis JH1]
 gi|256996097|gb|EEU83399.1| DNA repair protein RadC [Enterococcus faecalis D6]
 gi|256999958|gb|EEU86478.1| DNA repair protein radC [Enterococcus faecalis CH188]
 gi|257158921|gb|EEU88881.1| DNA repair protein RadC [Enterococcus faecalis ARO1/DG]
 gi|257159635|gb|EEU89595.1| DNA repair protein radC [Enterococcus faecalis T11]
 gi|294453302|gb|EFG21713.1| DNA repair protein RadC [Enterococcus faecalis PC1.1]
 gi|295114297|emb|CBL32934.1| DNA replication and repair protein RadC [Enterococcus sp. 7L76]
 gi|300849977|gb|EFK77727.1| DNA repair protein RadC [Enterococcus faecalis TUSoD Ef11]
 gi|315151663|gb|EFT95679.1| DNA repair protein RadC [Enterococcus faecalis TX0012]
 gi|323478891|gb|ADX78330.1| DNA repair protein RadC family protein [Enterococcus faecalis 62]
 gi|329573420|gb|EGG55030.1| DNA repair protein RadC [Enterococcus faecalis TX1467]
          Length = 232

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 133 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 193 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 228


>gi|260888418|ref|ZP_05899681.1| DNA repair protein RadC [Selenomonas sputigena ATCC 35185]
 gi|330838268|ref|YP_004412848.1| DNA repair protein RadC [Selenomonas sputigena ATCC 35185]
 gi|260861954|gb|EEX76454.1| DNA repair protein RadC [Selenomonas sputigena ATCC 35185]
 gi|329746032|gb|AEB99388.1| DNA repair protein RadC [Selenomonas sputigena ATCC 35185]
          Length = 229

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N ++A +  S GT+    V+ RE+ Q  +E SA ++ILVHNHPSG+P PS  DI
Sbjct: 132 LLLNAKNHILALKTISVGTLTSSVVHPREVFQAAIEQSAAAVILVHNHPSGDPAPSGEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     ++I V DH+I+G D F+S K   +I
Sbjct: 192 AVTRRMVEAGEIMDIPVLDHVIVGYDKFISLKEEGMI 228


>gi|255019864|ref|ZP_05291939.1| DNA repair protein RadC [Acidithiobacillus caldus ATCC 51756]
 gi|254970644|gb|EET28131.1| DNA repair protein RadC [Acidithiobacillus caldus ATCC 51756]
          Length = 224

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/95 (41%), Positives = 59/95 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E   +GTID   VY+RE+ +R LEL+A ++I+ HNHPSG   PS AD 
Sbjct: 128 LFLDNRHRVLRFEELFQGTIDAASVYVREVAKRALELNAAALIVAHNHPSGVAEPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +TQ +   L  L+I + DH ++G+   VS + + 
Sbjct: 188 QLTQRLEQALELLDIRLLDHFVVGETQAVSLREVG 222


>gi|254454766|ref|ZP_05068203.1| DNA repair protein RadC [Octadecabacter antarcticus 238]
 gi|198269172|gb|EDY93442.1| DNA repair protein RadC [Octadecabacter antarcticus 238]
          Length = 265

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q  GT+DHVPVY RE+V+R LEL+A+S+ILVHNHPSG+P PS+ DI
Sbjct: 169 LFLDRKNVLIADEAQGNGTVDHVPVYPREVVKRALELNASSLILVHNHPSGDPTPSNEDI 228

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      LNI +HDH+IIG+   +SFK   +I
Sbjct: 229 AMTMQIHDAAKALNISLHDHLIIGRSRELSFKSQGLI 265


>gi|315174741|gb|EFU18758.1| DNA repair protein RadC [Enterococcus faecalis TX1346]
          Length = 232

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 133 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 193 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 228


>gi|320195796|gb|EFW70421.1| DNA repair protein RadC [Escherichia coli WV_060327]
          Length = 150

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+  E+  RGT++ V V+ RE+++R L+ +A ++ILVHNHPSG P P   DI
Sbjct: 54  ILLDNQNQLLHREILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPRRCDI 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  L++ + DH I+     VS     ++
Sbjct: 114 KLTKKLQELLEMLDVRLLDHFIVAGTETVSMAERGLM 150


>gi|253689260|ref|YP_003018450.1| DNA repair protein RadC [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755838|gb|ACT13914.1| DNA repair protein RadC [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 157

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  EV + G I+   V+ REI++  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQHRLIEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +  +L+ L++ V DH+++G    VSF     +
Sbjct: 121 NITDRLKDSLSQLDVKVLDHLVVGSTEVVSFAERGWL 157


>gi|92116052|ref|YP_575781.1| DNA repair protein RadC [Nitrobacter hamburgensis X14]
 gi|91798946|gb|ABE61321.1| DNA repair protein RadC [Nitrobacter hamburgensis X14]
          Length = 254

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 64/97 (65%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI DE+Q  GT+DH PVY RE+V+R LELSAT+II+VHNHPSG+P PS ADI
Sbjct: 158 LFLDKRNQLIVDELQQVGTVDHTPVYPREVVKRALELSATAIIMVHNHPSGDPTPSQADI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++II    PL I VHDHII+GK+   S KGLR+I
Sbjct: 218 QMTKSIIDISKPLGISVHDHIIVGKNGHASLKGLRLI 254


>gi|251780848|ref|ZP_04823768.1| DNA repair protein RadC [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243085163|gb|EES51053.1| DNA repair protein RadC [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 229

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  NI+I  +   +G+++   V+ REI +  +  S+  II+ HNHPSG+P PS  DI
Sbjct: 133 IFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSAKIIICHNHPSGDPTPSKEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  I      + I + DHIIIGK+ F+S K    I
Sbjct: 193 NITLRIKECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229


>gi|121582744|ref|YP_973186.1| DNA repair protein RadC [Polaromonas naphthalenivorans CJ2]
 gi|120596006|gb|ABM39444.1| DNA repair protein RadC [Polaromonas naphthalenivorans CJ2]
          Length = 168

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI      RGT+    VY RE+V+  L L+A ++I  HNHPSG   PS AD 
Sbjct: 72  LMLDAQNRLIEYVELFRGTVSQASVYPREVVKESLALNAAAVIFCHNHPSGVAEPSRADE 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + T L+ +++ V DH+I+  +  +SF    ++
Sbjct: 132 VLTQTLKTALSLVDVRVLDHLIVAGNEIMSFAERGLL 168


>gi|319943236|ref|ZP_08017519.1| DNA repair protein RadC [Lautropia mirabilis ATCC 51599]
 gi|319743778|gb|EFV96182.1| DNA repair protein RadC [Lautropia mirabilis ATCC 51599]
          Length = 278

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 63/97 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + LI  ++  RGT++   VY RE+++  L+L+A ++IL HNHPSG+P PSDAD+
Sbjct: 182 LFLNSQHRLITADMMFRGTVNQTAVYPREVLKHALKLNAAAVILSHNHPSGHPEPSDADL 241

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  ++I V DHII+      SF    ++
Sbjct: 242 SLTRTLQAVLGQVDIRVLDHIIVAGSQQYSFAQHGLL 278


>gi|145630047|ref|ZP_01785829.1| DNA repair protein RadC [Haemophilus influenzae R3021]
 gi|144984328|gb|EDJ91751.1| DNA repair protein RadC [Haemophilus influenzae R3021]
          Length = 99

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 3  LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 62

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ I      + I V DH+I+GK    SF    ++
Sbjct: 63 LITKKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL 99


>gi|294495396|ref|YP_003541889.1| DNA replication and repair protein RadC [Methanohalophilus mahii
           DSM 5219]
 gi|292666395|gb|ADE36244.1| DNA replication and repair protein RadC [Methanohalophilus mahii
           DSM 5219]
          Length = 229

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++ +EV S G+++   V+ RE+ +  L  SA S+IL HNHPSG+P PS  DI
Sbjct: 132 LHLDTKNQVLREEVVSIGSLNANIVHPREVFKSALLESAASVILTHNHPSGDPTPSREDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ ++     L I V DH+IIG+  FVS K    I
Sbjct: 192 NITRKLVDGGKILGIDVLDHVIIGEGKFVSLKDEGYI 228


>gi|87120857|ref|ZP_01076749.1| DNA repair protein RadC [Marinomonas sp. MED121]
 gi|86163695|gb|EAQ64968.1| DNA repair protein RadC [Marinomonas sp. MED121]
          Length = 224

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + LI  +    GTID   VY RE+V+  L  +A + IL HNHPSG   PS ADI
Sbjct: 128 MFLDSQHRLIHFQEMFYGTIDAAAVYPREVVKMALSYNAAACILAHNHPSGVSEPSQADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +TQ +   L+ ++I + DH +IG    +S     
Sbjct: 188 YITQKLQQALSLVDINLLDHFVIGDGKPISLAERG 222


>gi|257420575|ref|ZP_05597565.1| DNA repair protein radC [Enterococcus faecalis X98]
 gi|257162399|gb|EEU92359.1| DNA repair protein radC [Enterococcus faecalis X98]
          Length = 232

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 133 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 193 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 228


>gi|256960307|ref|ZP_05564478.1| DNA repair protein RadC [Enterococcus faecalis Merz96]
 gi|257083375|ref|ZP_05577736.1| DNA repair protein RadC [Enterococcus faecalis Fly1]
 gi|256950803|gb|EEU67435.1| DNA repair protein RadC [Enterococcus faecalis Merz96]
 gi|256991405|gb|EEU78707.1| DNA repair protein RadC [Enterococcus faecalis Fly1]
          Length = 232

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 133 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 193 QFTKRMEECGEMMGIQLLDHIIVGDSGYISLREENF 228


>gi|157370015|ref|YP_001478004.1| DNA repair protein RadC [Serratia proteamaculans 568]
 gi|157321779|gb|ABV40876.1| DNA repair protein RadC [Serratia proteamaculans 568]
          Length = 160

 Score =  127 bits (321), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    G+I+   V+ REIV+  L+ +A +++L H HPSG+ +PSDAD 
Sbjct: 64  LYLDNQHRLLTHETLFTGSINSTEVHPREIVKSALKHNAAAVLLAHCHPSGHADPSDADR 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ I   L  + + V DH I+G     SF    ++
Sbjct: 124 NITRRIQEALMLVEVRVLDHCIVGGMTVYSFAEHSLL 160


>gi|325571584|ref|ZP_08147084.1| DNA repair protein RadC [Enterococcus casseliflavus ATCC 12755]
 gi|325156060|gb|EGC68256.1| DNA repair protein RadC [Enterococcus casseliflavus ATCC 12755]
          Length = 230

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +    G+++    + REI    +  SA  +I+VHNHPSG+P  S+AD+
Sbjct: 129 IYLNTKNEIIQKKTIFIGSLNQSIAHPREIFHWAVRYSAARVIVVHNHPSGSPQASEADL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +I   + + I + DH+IIG +A+VS +   +
Sbjct: 189 LFTRRLIKCGDLMGIELLDHLIIGDNAYVSLREEGL 224


>gi|116333860|ref|YP_795387.1| DNA repair protein [Lactobacillus brevis ATCC 367]
 gi|116099207|gb|ABJ64356.1| DNA repair protein [Lactobacillus brevis ATCC 367]
          Length = 220

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 51/95 (53%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  + +I  +   +GT++  PV+ REI +  +   A ++I+ HNHPSG P PS +D   
Sbjct: 112 LDAQHRIIERQTVFQGTLNSCPVHPREIFRVAVMSGAATVIVAHNHPSGQPQPSTSDRAF 171

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            Q +      + I + D  ++G  ++ SFK   I+
Sbjct: 172 MQRLAACGQLMGIPLLDGFVVGLHSYFSFKEAGIL 206


>gi|16803589|ref|NP_465074.1| DNA repair protein RadC [Listeria monocytogenes EGD-e]
 gi|47096713|ref|ZP_00234298.1| DNA repair protein RadC [Listeria monocytogenes str. 1/2a F6854]
 gi|224499790|ref|ZP_03668139.1| DNA repair protein RadC [Listeria monocytogenes Finland 1988]
 gi|224501511|ref|ZP_03669818.1| DNA repair protein RadC [Listeria monocytogenes FSL R2-561]
 gi|254828216|ref|ZP_05232903.1| DNA repair protein RadC [Listeria monocytogenes FSL N3-165]
 gi|254831950|ref|ZP_05236605.1| DNA repair protein RadC [Listeria monocytogenes 10403S]
 gi|254898284|ref|ZP_05258208.1| DNA repair protein RadC [Listeria monocytogenes J0161]
 gi|254912223|ref|ZP_05262235.1| DNA repair protein RadC [Listeria monocytogenes J2818]
 gi|254936551|ref|ZP_05268248.1| DNA repair protein RadC [Listeria monocytogenes F6900]
 gi|255026815|ref|ZP_05298801.1| DNA repair protein RadC [Listeria monocytogenes FSL J2-003]
 gi|284801939|ref|YP_003413804.1| DNA repair protein RadC [Listeria monocytogenes 08-5578]
 gi|284995081|ref|YP_003416849.1| DNA repair protein RadC [Listeria monocytogenes 08-5923]
 gi|25009032|sp|Q8Y6Y2|Y1549_LISMO RecName: Full=UPF0758 protein lmo1549
 gi|16410978|emb|CAC99627.1| lmo1549 [Listeria monocytogenes EGD-e]
 gi|47014897|gb|EAL05845.1| DNA repair protein RadC [Listeria monocytogenes str. 1/2a F6854]
 gi|258600605|gb|EEW13930.1| DNA repair protein RadC [Listeria monocytogenes FSL N3-165]
 gi|258609145|gb|EEW21753.1| DNA repair protein RadC [Listeria monocytogenes F6900]
 gi|284057501|gb|ADB68442.1| DNA repair protein RadC [Listeria monocytogenes 08-5578]
 gi|284060548|gb|ADB71487.1| DNA repair protein RadC [Listeria monocytogenes 08-5923]
 gi|293590197|gb|EFF98531.1| DNA repair protein RadC [Listeria monocytogenes J2818]
          Length = 224

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G ++   V+ RE+ +  L  SA SI+  HNHPSG+P PS  D+
Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPTPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +    N + I + DHIIIGK+ ++S K    
Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223


>gi|261856735|ref|YP_003264018.1| DNA repair protein RadC [Halothiobacillus neapolitanus c2]
 gi|261837204|gb|ACX96971.1| DNA repair protein RadC [Halothiobacillus neapolitanus c2]
          Length = 223

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ + ++A E    GTI+   V+ RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDQRHRVLAFERLFYGTINQSAVHPREVVKAVLRHNAAAVILAHNHPSGVAEPSTADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   LN +++ + DH+I+G     S   L +I
Sbjct: 188 EITLRLRDALNLIDVRLLDHMIVGD-RCTSMAELGMI 223


>gi|238787658|ref|ZP_04631456.1| DNA repair protein RadC [Yersinia frederiksenii ATCC 33641]
 gi|238724445|gb|EEQ16087.1| DNA repair protein RadC [Yersinia frederiksenii ATCC 33641]
          Length = 159

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+A E    G+I+   V+ REIV+  L+ +A +++L H HPSG+  PS AD 
Sbjct: 63  LWLDNQHRLLAHETLFTGSINSTEVHPREIVKAALQHNAAAVLLAHCHPSGHAEPSVADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L  + + + DH I+G     SF    ++
Sbjct: 123 QITGKIKDALALVEVRMLDHCIVGGMTVYSFAEHGLL 159


>gi|266623040|ref|ZP_06115975.1| DNA repair protein RadC [Clostridium hathewayi DSM 13479]
 gi|288865204|gb|EFC97502.1| DNA repair protein RadC [Clostridium hathewayi DSM 13479]
          Length = 231

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+   +L+ D + S+GT++   V  REI    L+  A ++I+VHNHPSG+P PS  DI
Sbjct: 135 MLLNTKGVLLKDVLVSQGTVNASVVSPREIFIEALKYHAVNLIVVHNHPSGDPAPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+   + + I + DHIIIG +++ SFK   II
Sbjct: 195 TLTRRIMEAGDLIGIRMLDHIIIGDNSYTSFKERGII 231


>gi|217973526|ref|YP_002358277.1| DNA repair protein RadC [Shewanella baltica OS223]
 gi|217498661|gb|ACK46854.1| DNA repair protein RadC [Shewanella baltica OS223]
          Length = 160

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI+ E    GTID   VY RE+V+  L  +A ++I  HNHPSG P PS+AD 
Sbjct: 64  LLLDSQHRLISCEELFFGTIDAASVYPREVVKIVLHRNAAAVIFAHNHPSGMPEPSEADK 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + T L+ +++ V DH ++G    VSF     +
Sbjct: 124 RITERLKTALSTIDVSVLDHFVVGHQDVVSFAERGWL 160


>gi|110633807|ref|YP_674015.1| DNA repair protein RadC [Mesorhizobium sp. BNC1]
 gi|110284791|gb|ABG62850.1| DNA repair protein RadC [Chelativorans sp. BNC1]
          Length = 251

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 63/96 (65%), Positives = 73/96 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI DE Q  GT+DH PVY RE+V+R LELSA++IILVHNHPSG+P PS ADI
Sbjct: 155 LFLDKKNALIKDECQQTGTVDHTPVYPREVVKRALELSASAIILVHNHPSGDPTPSRADI 214

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            MT+ I +T  PL I VHDHIIIGK    S KG+R+
Sbjct: 215 EMTKLIASTAEPLGITVHDHIIIGKKGHASMKGMRL 250


>gi|283852530|ref|ZP_06369798.1| DNA repair protein RadC [Desulfovibrio sp. FW1012B]
 gi|283572138|gb|EFC20130.1| DNA repair protein RadC [Desulfovibrio sp. FW1012B]
          Length = 228

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 40/94 (42%), Positives = 58/94 (61%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D  N LI  E  S+GTID   VY RE++   L  +A+ +ILVHNHPSG+P PS  DI+ T
Sbjct: 135 DTKNRLIGWEQVSKGTIDQAAVYPREVLGVALRHNASGMILVHNHPSGDPRPSVQDIDFT 194

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + I T    +++ V DH+++  D F SF+   ++
Sbjct: 195 RRIRTAAREIDLRVLDHLVVTDDRFFSFQSEGML 228


>gi|217964304|ref|YP_002349982.1| RadC [Listeria monocytogenes HCC23]
 gi|254789655|sp|B8DHJ9|Y1020_LISMH RecName: Full=UPF0758 protein LMHCC_1020
 gi|217333574|gb|ACK39368.1| RadC [Listeria monocytogenes HCC23]
 gi|307571130|emb|CAR84309.1| DNA repair protein [Listeria monocytogenes L99]
          Length = 224

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G ++   V+ RE+ +  L  SA SI+  HNHPSG+P PS  D+
Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPAPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +    N + I + DHIIIGK+ ++S K    
Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223


>gi|39995494|ref|NP_951445.1| DNA repair protein RadC [Geobacter sulfurreducens PCA]
 gi|54036228|sp|Q74G62|Y386_GEOSL RecName: Full=UPF0758 protein GSU0386
 gi|39982257|gb|AAR33718.1| DNA repair protein RadC [Geobacter sulfurreducens PCA]
 gi|298504494|gb|ADI83217.1| protein of unknown function DUF2466 [Geobacter sulfurreducens
           KN400]
          Length = 229

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++ +   S G+++   V+ RE+    +  SA ++ILVHNHP+G+P PS  D+
Sbjct: 133 LLLDGKNRIMREIQVSEGSLNQSIVHPREVFNPAVRESAAAVILVHNHPTGDPAPSREDL 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    + + I V DHIIIG   F SF    ++
Sbjct: 193 EITRRLREAGDIMGIRVLDHIIIGDGRFTSFVSAGLL 229


>gi|303245835|ref|ZP_07332117.1| DNA repair protein RadC [Desulfovibrio fructosovorans JJ]
 gi|302492618|gb|EFL52486.1| DNA repair protein RadC [Desulfovibrio fructosovorans JJ]
          Length = 228

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 57/94 (60%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D  N LI  E  S+GT+D   VY RE++   L   A+ +ILVHNHPSG+P PS  D+  T
Sbjct: 135 DTKNRLIGWEQVSKGTVDQAAVYPREVLGVALRHKASGMILVHNHPSGDPRPSTEDVEFT 194

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + I +    +++ + DH+++ ++ F SF+   +I
Sbjct: 195 RRIKSAAREIDLRLLDHLVVTENRFFSFQAEGMI 228


>gi|37678993|ref|NP_933602.1| DNA repair protein [Vibrio vulnificus YJ016]
 gi|37197735|dbj|BAC93573.1| DNA repair protein [Vibrio vulnificus YJ016]
          Length = 165

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N  I  +    GTID   VY RE+V+  LE++A ++IL HNHPSG+  PS AD 
Sbjct: 70  LLLDNQNRPIEFKELFHGTIDAASVYPREVVKVVLEVNAAAVILAHNHPSGDATPSQADR 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L+ +++ V DH I+     VSF     +
Sbjct: 130 RITERLKDALSLVDVRVLDH-IVAGKDSVSFAERGWL 165


>gi|150396672|ref|YP_001327139.1| DNA repair protein RadC [Sinorhizobium medicae WSM419]
 gi|226736631|sp|A6U9H4|Y1459_SINMW RecName: Full=UPF0758 protein Smed_1459
 gi|150028187|gb|ABR60304.1| DNA repair protein RadC [Sinorhizobium medicae WSM419]
          Length = 260

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 65/96 (67%), Positives = 76/96 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ +GTIDH PVY RE+V+R LELSAT++ILVHNHPSG+P PS ADI
Sbjct: 164 LFLDKRNTLIADEVQQQGTIDHTPVYPREVVKRALELSATALILVHNHPSGDPTPSCADI 223

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            MT+ I     PL I +HDH+IIGKD  VS KGL++
Sbjct: 224 EMTKLIAEAAKPLGIALHDHVIIGKDGHVSLKGLQL 259


>gi|310817115|ref|YP_003965079.1| DNA repair protein RadC [Ketogulonicigenium vulgare Y25]
 gi|308755850|gb|ADO43779.1| DNA repair protein RadC [Ketogulonicigenium vulgare Y25]
          Length = 252

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ NILIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS  DI
Sbjct: 156 LFLDRKNILIADEAQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSPQDI 215

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I   L  L + +HDH++IG+   +SF+   +I
Sbjct: 216 AITKQIDEGLRVLGLTLHDHLVIGRAREISFRAEGLI 252


>gi|291166595|gb|EFE28641.1| DNA repair protein RadC [Filifactor alocis ATCC 35896]
          Length = 227

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I D   S G+++   V+ RE+ +  L  S+  I L+HNHPSG+  PS  DI
Sbjct: 131 LFLDTKNKIICDRDISVGSLNASIVHPREVFKEALLYSSNKIFLIHNHPSGDTEPSREDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L + V DHIIIG   + S +    +
Sbjct: 191 LITERLKKAGELLGVEVLDHIIIGNGKYSSLRECGYL 227


>gi|188589437|ref|YP_001919945.1| DNA repair protein RadC [Clostridium botulinum E3 str. Alaska E43]
 gi|238689648|sp|B2V090|Y547_CLOBA RecName: Full=UPF0758 protein CLH_0547
 gi|188499718|gb|ACD52854.1| DNA repair protein RadC [Clostridium botulinum E3 str. Alaska E43]
          Length = 229

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  NI+I  +   +G+++   V+ REI +  +  S+T II+ HNHPSG+P PS  DI
Sbjct: 133 IFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSTKIIICHNHPSGDPTPSKEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  I      + I + DHIIIGK+ F+S K    I
Sbjct: 193 NITLRIKECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229


>gi|296134038|ref|YP_003641285.1| DNA repair protein RadC [Thermincola sp. JR]
 gi|296032616|gb|ADG83384.1| DNA repair protein RadC [Thermincola potens JR]
          Length = 231

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N ++  E  S G ++   V+ REI +  ++ SA ++I+ HNHPSG+P+PS  DI
Sbjct: 135 IMLNTKNQVLNIETVSIGHLNASLVHPREIFKSAIKKSAAALIVAHNHPSGDPHPSKEDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DH+I+G + F S K   +I
Sbjct: 195 LITKRLVEVGEIIGIEVLDHVILGDNNFTSLKQEGLI 231


>gi|121606228|ref|YP_983557.1| DNA repair protein RadC [Polaromonas naphthalenivorans CJ2]
 gi|171769297|sp|A1VSK8|Y3339_POLNA RecName: Full=UPF0758 protein Pnap_3339
 gi|120595197|gb|ABM38636.1| DNA replication and repair protein RadC [Polaromonas
           naphthalenivorans CJ2]
          Length = 224

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGT+    VY RE+V R L L+A S++L HNHPSG   PS AD 
Sbjct: 128 LFLDSQHRLIALEELFRGTLTQTSVYPREVVIRALALNAASVVLAHNHPSGAAQPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + T L  +++ V DH ++     VS   + ++
Sbjct: 188 MLTQTLKTALALVDVRVLDHFVVTASLAVSMAEMGLV 224


>gi|315282469|ref|ZP_07870876.1| putative DNA repair protein [Listeria marthii FSL S4-120]
 gi|313613887|gb|EFR87624.1| putative DNA repair protein [Listeria marthii FSL S4-120]
          Length = 224

 Score =  127 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G ++   V+ RE+ +  L  SA SI+  HNHPSG+P PS  D+
Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPAPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +    N + I + DHIIIGK+ ++S K    
Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223


>gi|85374339|ref|YP_458401.1| hypothetical protein ELI_07560 [Erythrobacter litoralis HTCC2594]
 gi|84787422|gb|ABC63604.1| hypothetical protein ELI_07560 [Erythrobacter litoralis HTCC2594]
          Length = 236

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 63/97 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LI D     G+ID   ++ RE+++R L++ AT++ILVHNHPSGNP PS AD+
Sbjct: 140 LYLNAQNRLIQDHHVGDGSIDEAAIHPREVIKRGLDIGATALILVHNHPSGNPEPSRADV 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L I VHDH+I+G++  VS +   +I
Sbjct: 200 QITTRIAEAGRLLGITVHDHVIVGREGHVSLRAKGLI 236


>gi|167622369|ref|YP_001672663.1| DNA repair protein RadC [Shewanella halifaxensis HAW-EB4]
 gi|189029403|sp|B0TQL1|Y429_SHEHH RecName: Full=UPF0758 protein Shal_0429
 gi|167352391|gb|ABZ75004.1| DNA repair protein RadC [Shewanella halifaxensis HAW-EB4]
          Length = 225

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTI+   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTINSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSTADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKQALQTIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|221065434|ref|ZP_03541539.1| DNA repair protein RadC [Comamonas testosteroni KF-1]
 gi|220710457|gb|EED65825.1| DNA repair protein RadC [Comamonas testosteroni KF-1]
          Length = 230

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V R L   A ++IL HNHPSG+  PS AD 
Sbjct: 134 LFLDSQNRLLALEEMFRGTLTQTSVYPREVVLRALHHHAGAVILAHNHPSGSVQPSSADC 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DHII+G  A  S     ++
Sbjct: 194 ALTATLKAALALIDVRVLDHIIVGPGAACSMAEEALL 230


>gi|107104421|ref|ZP_01368339.1| hypothetical protein PaerPA_01005498 [Pseudomonas aeruginosa PACS2]
 gi|116053466|ref|YP_793793.1| DNA repair protein RadC [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894422|ref|YP_002443292.1| DNA repair protein RadC [Pseudomonas aeruginosa LESB58]
 gi|254243795|ref|ZP_04937117.1| DNA repair protein RadC [Pseudomonas aeruginosa 2192]
 gi|296392178|ref|ZP_06881653.1| DNA repair protein RadC [Pseudomonas aeruginosa PAb1]
 gi|313106745|ref|ZP_07792962.1| DNA repair protein RadC [Pseudomonas aeruginosa 39016]
 gi|122256513|sp|Q02E43|Y7023_PSEAB RecName: Full=UPF0758 protein PA14_70230
 gi|226736626|sp|B7V5L0|Y5714_PSEA8 RecName: Full=UPF0758 protein PLES_57141
 gi|115588687|gb|ABJ14702.1| DNA repair protein RadC [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126197173|gb|EAZ61236.1| DNA repair protein RadC [Pseudomonas aeruginosa 2192]
 gi|218774651|emb|CAW30468.1| DNA repair protein RadC [Pseudomonas aeruginosa LESB58]
 gi|310879464|gb|EFQ38058.1| DNA repair protein RadC [Pseudomonas aeruginosa 39016]
          Length = 224

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV  +G+ID   VY R++V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 128 LFLDTRHRVLAFEVLFQGSIDGASVYPRQVVKRTLAHNAAALILTHNHPSGDARPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DH IIG    +S      +
Sbjct: 188 QLTARLKEALALIDVRVLDHFIIGDGEPLSLAEYGWL 224


>gi|261820684|ref|YP_003258790.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163]
 gi|261604697|gb|ACX87183.1| DNA repair protein RadC [Pectobacterium wasabiae WPP163]
          Length = 157

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  + LI  E+ + G I+   V+ REI++  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLNNQHRLIEKEIIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGCAEPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +  +L+ L++ V DH+++G    VSF     +
Sbjct: 121 HITDRLKESLSQLDVRVLDHLVVGGAEVVSFAERGWL 157


>gi|290893950|ref|ZP_06556926.1| DNA repair protein RadC [Listeria monocytogenes FSL J2-071]
 gi|290556488|gb|EFD90026.1| DNA repair protein RadC [Listeria monocytogenes FSL J2-071]
 gi|313608630|gb|EFR84484.1| putative DNA repair protein [Listeria monocytogenes FSL F2-208]
          Length = 224

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G ++   V+ RE+ +  L  SA SI+  HNHPSG+P PS  D+
Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPAPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +    N + I + DHIIIGK+ ++S K    
Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223


>gi|251788567|ref|YP_003003288.1| DNA repair protein RadC [Dickeya zeae Ech1591]
 gi|271498985|ref|YP_003332010.1| DNA repair protein RadC [Dickeya dadantii Ech586]
 gi|247537188|gb|ACT05809.1| DNA repair protein RadC [Dickeya zeae Ech1591]
 gi|270342540|gb|ACZ75305.1| DNA repair protein RadC [Dickeya dadantii Ech586]
          Length = 157

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E+ + G+I+HV + IREIV+  L  +A ++IL HNHPSG+  PS  D 
Sbjct: 61  LFLDNQHRLIDREIMALGSINHVDIPIREIVKAALRHNAAAVILAHNHPSGHAEPSTPDR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + + L  ++I   DH++IG +  VSF     +
Sbjct: 121 ALTERLKSALELVDIRTLDHLVIGGNQVVSFAERGWL 157


>gi|320539538|ref|ZP_08039205.1| putative phage DNA repair protein [Serratia symbiotica str. Tucson]
 gi|320030391|gb|EFW12403.1| putative phage DNA repair protein [Serratia symbiotica str. Tucson]
          Length = 159

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+A E    G+I+   V+ REIV+  L+ +A +++L H HPSG+  PS AD 
Sbjct: 63  LWLDNQHRLLAHETLFTGSINSTEVHPREIVKAALKHNAAAVLLAHCHPSGHAEPSVADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L  + + + DH I+G     SF    ++
Sbjct: 123 QITGKIKDALALVEVRMLDHCIVGGMTVYSFAEHGLL 159


>gi|88707202|ref|ZP_01104892.1| DNA repair protein RadC [Congregibacter litoralis KT71]
 gi|88698545|gb|EAQ95674.1| DNA repair protein RadC [Congregibacter litoralis KT71]
          Length = 170

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++      +GTID   VY R +VQ  L L+A +++L HNHPSG   PS AD 
Sbjct: 74  LFLDSQHRVLQYAELFQGTIDGAAVYPRVVVQEALGLNAAAVVLFHNHPSGVAEPSTADR 133

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ +   L  +++ V DH+++      SF    ++
Sbjct: 134 NITKRLQDALALIDVRVLDHLVVSAGEATSFAERGLL 170


>gi|46907778|ref|YP_014167.1| DNA repair protein RadC [Listeria monocytogenes str. 4b F2365]
 gi|47093084|ref|ZP_00230861.1| DNA repair protein RadC [Listeria monocytogenes str. 4b H7858]
 gi|226224150|ref|YP_002758257.1| DNA repair protein RadC [Listeria monocytogenes Clip81459]
 gi|254824392|ref|ZP_05229393.1| DNA repair protein RadC [Listeria monocytogenes FSL J1-194]
 gi|254852174|ref|ZP_05241522.1| DNA repair protein RadC [Listeria monocytogenes FSL R2-503]
 gi|254992662|ref|ZP_05274852.1| DNA repair protein RadC [Listeria monocytogenes FSL J2-064]
 gi|255522562|ref|ZP_05389799.1| DNA repair protein RadC [Listeria monocytogenes FSL J1-175]
 gi|300764784|ref|ZP_07074774.1| DNA repair protein RadC [Listeria monocytogenes FSL N1-017]
 gi|54036226|sp|Q71ZC0|Y1569_LISMF RecName: Full=UPF0758 protein LMOf2365_1569
 gi|259551878|sp|C1KVJ6|Y1560_LISMC RecName: Full=UPF0758 protein Lm4b_01560
 gi|46881047|gb|AAT04344.1| DNA repair protein RadC [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018524|gb|EAL09280.1| DNA repair protein RadC [Listeria monocytogenes str. 4b H7858]
 gi|225876612|emb|CAS05321.1| Putative DNA repair protein RadC [Listeria monocytogenes serotype
           4b str. CLIP 80459]
 gi|258605477|gb|EEW18085.1| DNA repair protein RadC [Listeria monocytogenes FSL R2-503]
 gi|293593627|gb|EFG01388.1| DNA repair protein RadC [Listeria monocytogenes FSL J1-194]
 gi|300514460|gb|EFK41517.1| DNA repair protein RadC [Listeria monocytogenes FSL N1-017]
 gi|328465585|gb|EGF36814.1| hypothetical protein LM1816_06675 [Listeria monocytogenes 1816]
 gi|328474908|gb|EGF45708.1| hypothetical protein LM220_12012 [Listeria monocytogenes 220]
          Length = 224

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G ++   V+ RE+ +  L  SA SI+  HNHPSG+P PS  D+
Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPTPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +    N + I + DHIIIGK+ ++S K    
Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223


>gi|51598155|ref|YP_072346.1| hypothetical protein YPTB3868 [Yersinia pseudotuberculosis IP
           32953]
 gi|186897377|ref|YP_001874489.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+]
 gi|51591437|emb|CAH23106.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|186700403|gb|ACC91032.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+]
          Length = 159

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+A E    G+I+   V+ REIV+  L+ +A +++L H HPSG+  PS AD 
Sbjct: 63  LWLDNQHRLLAHETLFTGSINSTEVHPREIVKAALQHNAAAVLLAHCHPSGHAEPSVADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L  + + + DH I+G     SF    ++
Sbjct: 123 QITGKIKDALALVEVRMLDHCIVGGMTVYSFAEHGLL 159


>gi|288957329|ref|YP_003447670.1| DNA repair protein [Azospirillum sp. B510]
 gi|288909637|dbj|BAI71126.1| DNA repair protein [Azospirillum sp. B510]
          Length = 249

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 59/98 (60%), Positives = 75/98 (76%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ RGTIDH PVY RE+V+R LELSA ++ILVHNHPSG+P PS ADI
Sbjct: 152 LFLDRRNTLIADEVQQRGTIDHTPVYPREVVKRALELSAAAVILVHNHPSGDPTPSRADI 211

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRII 97
            MT+ I+   N + +++HDH++IGK     SFK  R++
Sbjct: 212 EMTKEIVRAANAVGLVIHDHLVIGKGGRHTSFKAQRLL 249


>gi|56694982|ref|YP_165328.1| DNA repair protein RadC [Ruegeria pomeroyi DSS-3]
 gi|73913740|sp|Q5LWK3|Y054_SILPO RecName: Full=UPF0758 protein SPO0054
 gi|56676719|gb|AAV93385.1| DNA repair protein RadC [Ruegeria pomeroyi DSS-3]
          Length = 224

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/96 (54%), Positives = 73/96 (76%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD+ N+LIADE Q+RGT+DHVPVY RE+ +R LEL+A+++ILVHNHPSG+P PS +DI+
Sbjct: 129 YLDRKNVLIADEEQARGTVDHVPVYPREVAKRALELNASALILVHNHPSGDPTPSQSDID 188

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           MT  I +    L + +HDH+IIGK   +SF+    +
Sbjct: 189 MTARIRSACEALGLTLHDHLIIGKSVELSFRAEGYL 224


>gi|118580692|ref|YP_901942.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
 gi|118503402|gb|ABK99884.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
          Length = 166

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +   +  S G+++   V+ RE+ +  L  SA +IIL+HNHPSG+P PS  DI
Sbjct: 71  IHLDGKNRICCVDEVSVGSLNQSVVHPREVFKTALLSSAAAIILMHNHPSGDPAPSREDI 130

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + + V DHIIIG + F SF    ++
Sbjct: 131 EITKRLKEAGELIGVKVLDHIIIGDN-FHSFASQGLL 166


>gi|254237987|ref|ZP_04931310.1| DNA repair protein RadC [Pseudomonas aeruginosa C3719]
 gi|126169918|gb|EAZ55429.1| DNA repair protein RadC [Pseudomonas aeruginosa C3719]
          Length = 224

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A EV  +G+ID   VY R++V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 128 LFLDTRHRVLAFEVLFQGSIDGASVYPRQVVKRTLAHNAAALILTHNHPSGDARPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DH IIG    +S      +
Sbjct: 188 QLTARLKEALALIDVRVLDHFIIGDGEPLSLAEYGWL 224


>gi|226324950|ref|ZP_03800468.1| hypothetical protein COPCOM_02742 [Coprococcus comes ATCC 27758]
 gi|225206298|gb|EEG88652.1| hypothetical protein COPCOM_02742 [Coprococcus comes ATCC 27758]
          Length = 236

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI +   SRGT++   +  RE+    L+ +A  IIL+HNHPSG+P PS  DI
Sbjct: 137 LMLNTRSRLIGESEISRGTVNMSVISPRELFIEALQKNAVYIILLHNHPSGDPMPSREDI 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I    + L I + DHIIIG + +VS    +++
Sbjct: 197 LVTQRIREGGSLLGIELLDHIIIGDNCYVSLAEQKLL 233


>gi|85713454|ref|ZP_01044444.1| DNA repair protein RadC [Nitrobacter sp. Nb-311A]
 gi|85699358|gb|EAQ37225.1| DNA repair protein RadC [Nitrobacter sp. Nb-311A]
          Length = 236

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 66/97 (68%), Positives = 78/97 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+II+VHNHPSG+P PS ADI
Sbjct: 140 LFLDKRNQLIADEVQQVGTVDHTPVYPREVVKRALELSATAIIMVHNHPSGDPTPSQADI 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++II   +PL I VHDHII+GK+   S KGLR+I
Sbjct: 200 QMTRSIIDISSPLGISVHDHIIVGKNGHASLKGLRLI 236


>gi|312113065|ref|YP_004010661.1| DNA repair protein RadC [Rhodomicrobium vannielii ATCC 17100]
 gi|311218194|gb|ADP69562.1| DNA repair protein RadC [Rhodomicrobium vannielii ATCC 17100]
          Length = 253

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/95 (61%), Positives = 72/95 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQSRGTIDH  VY RE+V+R LELSA+++IL HNHPSG+P PS ADI
Sbjct: 157 LFLDRRNKLIADEVQSRGTIDHTSVYTREVVKRALELSASAVILAHNHPSGDPTPSRADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            MT+ I    + L + VHDHII+G+D  +S K + 
Sbjct: 217 EMTKEIAEVGSKLGVTVHDHIILGRDGHLSLKSVG 251


>gi|260459829|ref|ZP_05808083.1| DNA repair protein RadC [Mesorhizobium opportunistum WSM2075]
 gi|259034631|gb|EEW35888.1| DNA repair protein RadC [Mesorhizobium opportunistum WSM2075]
          Length = 253

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 66/97 (68%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI DEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 157 LFLDKKNTLIVDEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II T  PL I VHDHIIIG+    S KGL +I
Sbjct: 217 EMTKQIIDTAKPLGIAVHDHIIIGRKGHASMKGLLLI 253


>gi|290474866|ref|YP_003467746.1| putative CP4-57 prophage; DNA repair protein [Xenorhabdus bovienii
           SS-2004]
 gi|289174179|emb|CBJ80966.1| putative CP4-57 prophage; DNA repair protein [Xenorhabdus bovienii
           SS-2004]
          Length = 156

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    GT+ H  V+ RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQHRLLERETLFTGTLSHTEVHPREVVKAALRHNAAAVILAHNHPSGEMEPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +++ L  + + V DH+++G D  +SF     +
Sbjct: 121 HITKRVVSALALVEVRVLDHLVVGDD-VMSFAERGWL 156


>gi|77918415|ref|YP_356230.1| DNA repair protein, RadC-like [Pelobacter carbinolicus DSM 2380]
 gi|77544498|gb|ABA88060.1| DNA repair protein, RadC-like protein [Pelobacter carbinolicus DSM
           2380]
          Length = 166

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+  +  S G++    V+ RE+ +  L  SA  ++LVHNHPSG   PS  D 
Sbjct: 71  LHLDNKNRLLCLDRVSVGSLSASIVHPREVFKSALLSSAAGLVLVHNHPSGQTEPSHEDE 130

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++     L I V DHII+G   F SF    ++
Sbjct: 131 EVTTRLVKAGEMLGIHVLDHIILGDG-FFSFAEQGLL 166


>gi|238761834|ref|ZP_04622808.1| DNA repair protein RadC [Yersinia kristensenii ATCC 33638]
 gi|238699948|gb|EEP92691.1| DNA repair protein RadC [Yersinia kristensenii ATCC 33638]
          Length = 161

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+A E    GTI+   V+ RE+V+  ++ +A S +L HNHPS    PS AD 
Sbjct: 63  LWLDNQNRLLAQETLFTGTINSTTVHPRELVKSAMKHNAASAVLAHNHPSQLAEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++  L  +++ V DH+++G    VSF     +
Sbjct: 123 QITDRLVNALGLVDVRVLDHLVVGGLDIVSFAERGWL 159


>gi|75674533|ref|YP_316954.1| DNA repair protein RadC [Nitrobacter winogradskyi Nb-255]
 gi|74419403|gb|ABA03602.1| DNA repair protein RadC [Nitrobacter winogradskyi Nb-255]
          Length = 236

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 65/97 (67%), Positives = 78/97 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GTIDH PVY RE+V+R LELSAT+II+VHNHPSG+P PS ADI
Sbjct: 140 LFLDKRNQLIADEVQQVGTIDHTPVYPREVVKRALELSATAIIMVHNHPSGDPTPSQADI 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++I+   +PL I VHDHII+GK+   S KGLR++
Sbjct: 200 QMTKSIVDISSPLGISVHDHIIVGKNGHSSLKGLRLM 236


>gi|113971925|ref|YP_735718.1| DNA repair protein RadC [Shewanella sp. MR-4]
 gi|123324586|sp|Q0HE56|Y3597_SHESM RecName: Full=UPF0758 protein Shewmr4_3597
 gi|113886609|gb|ABI40661.1| DNA repair protein RadC [Shewanella sp. MR-4]
          Length = 225

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|229087017|ref|ZP_04219171.1| DNA repair protein radC [Bacillus cereus Rock3-44]
 gi|228696280|gb|EEL49111.1| DNA repair protein radC [Bacillus cereus Rock3-44]
          Length = 225

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVMHRQTVFIGSLNASIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I + DHIIIG   FVS K    I
Sbjct: 189 EVTKRLVNCGRIIGIEILDHIIIGDHKFVSLKEKGHI 225


>gi|304414796|ref|ZP_07395755.1| DNA repair protein RadC [Candidatus Regiella insecticola LSR1]
 gi|304283148|gb|EFL91561.1| DNA repair protein RadC [Candidatus Regiella insecticola LSR1]
          Length = 181

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    +I+ +    G+I  V ++ REIV+  L+++A ++IL HNHPSG   PS+AD 
Sbjct: 85  LFLDNQYRVISHDELFIGSISSVEIHPREIVREALKVNAAALILSHNHPSGQAEPSEADN 144

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  II     L+I + DH++IG   +VSF     I
Sbjct: 145 LITVRIIKACALLDIRLLDHLVIGHGEYVSFAERGWI 181


>gi|251788764|ref|YP_003003485.1| DNA repair protein RadC [Dickeya zeae Ech1591]
 gi|247537385|gb|ACT06006.1| DNA repair protein RadC [Dickeya zeae Ech1591]
          Length = 169

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL   + LI       GT+    VY REIV+  L  +A ++IL HNHPSGN  PS AD+
Sbjct: 73  LFLTTRHRLIEYAELFYGTLATTAVYPREIVRNALSCNAAAVILAHNHPSGNTEPSQADL 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DHII+G +  +SF    ++
Sbjct: 133 MLTRRVSAALALVDVRVLDHIIVGGNDTLSFAERALL 169


>gi|284008822|emb|CBA75590.1| DNA repair protein [Arsenophonus nasoniae]
          Length = 222

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  E   +GTI+ V V+ REI+++ ++++A SIIL HNHPSGNP PS AD 
Sbjct: 126 LFLNNQNQIICYEEMFKGTINRVEVHPREILRQAVKVNAVSIILAHNHPSGNPEPSLADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      ++I + DH +I     +SF  L ++
Sbjct: 186 VVTERIANACRLIDIKLLDHFVITHKKCLSFVELDLL 222


>gi|24375732|ref|NP_719775.1| DNA repair protein RadC [Shewanella oneidensis MR-1]
 gi|38372485|sp|Q8E9M2|Y4248_SHEON RecName: Full=UPF0758 protein SO_4248
 gi|24350669|gb|AAN57219.1|AE015857_12 DNA repair protein RadC [Shewanella oneidensis MR-1]
          Length = 225

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|114564978|ref|YP_752492.1| DNA repair protein RadC [Shewanella frigidimarina NCIMB 400]
 gi|122298392|sp|Q07WG1|Y3828_SHEFN RecName: Full=UPF0758 protein Sfri_3828
 gi|114336271|gb|ABI73653.1| DNA repair protein RadC [Shewanella frigidimarina NCIMB 400]
          Length = 225

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDTQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERIKNALATIDVSLLDHMVVGDQEIVSFAERGWI 224


>gi|49475599|ref|YP_033640.1| DNA repair protein radC [Bartonella henselae str. Houston-1]
 gi|49238406|emb|CAF27633.1| DNA repair protein radC [Bartonella henselae str. Houston-1]
          Length = 264

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 56/97 (57%), Positives = 70/97 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N L+ADEVQ  GTIDH PVY RE++ R L+LSA+ +ILVHNHPSG+  PS AD+
Sbjct: 168 LFLDKKNGLLADEVQQTGTIDHTPVYPREVISRALQLSASGLILVHNHPSGDATPSKADV 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +    N L I VHDH+II ++ + SFK L+ I
Sbjct: 228 TMTYRLKDAANALGITVHDHLIIARNNYTSFKELKFI 264


>gi|238793077|ref|ZP_04636706.1| DNA repair protein RadC [Yersinia intermedia ATCC 29909]
 gi|238727677|gb|EEQ19202.1| DNA repair protein RadC [Yersinia intermedia ATCC 29909]
          Length = 161

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+A E    GTI+   V+ RE+V+  ++ +A S +L HNHPS    PS AD 
Sbjct: 63  LWLDNQNRLLAQETLFTGTINSTTVHPRELVKSAMKHNAASAVLAHNHPSQLAEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++  L  +++ V DH+++G    VSF     +
Sbjct: 123 QITDRLVNALGLVDVRVLDHLVVGGLDIVSFAERGWL 159


>gi|206578396|ref|YP_002240722.1| DNA repair protein, RadC family [Klebsiella pneumoniae 342]
 gi|206567454|gb|ACI09230.1| DNA repair protein, RadC family [Klebsiella pneumoniae 342]
          Length = 161

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  + L+  E    G+I+HV V+ RE+V+  L  +A +++L HNHPSG+P PS  D 
Sbjct: 65  LYLNNQHCLLESETLFAGSINHVQVHPREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDR 124

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +   L  +++   DH++IG +  VSF     I
Sbjct: 125 NITGRLKEALALVDVNTLDHLVIGSEGIVSFAERGWI 161


>gi|241767328|ref|ZP_04765050.1| DNA repair protein RadC [Acidovorax delafieldii 2AN]
 gi|241361963|gb|EER58149.1| DNA repair protein RadC [Acidovorax delafieldii 2AN]
          Length = 237

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L+A E   RGT+    VY RE+V R L   A +++L HNHPSG+  PS AD 
Sbjct: 141 LFLDSQNRLLAMEELFRGTLTQTSVYPREVVLRALHHQAAAVVLAHNHPSGSVAPSRADE 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  + TTL  +++ V DH+I+     +S     ++
Sbjct: 201 ALTHTLKTTLALVDVRVLDHVIVAPGQALSMAEKGLV 237


>gi|192288820|ref|YP_001989425.1| DNA repair protein RadC [Rhodopseudomonas palustris TIE-1]
 gi|192282569|gb|ACE98949.1| DNA repair protein RadC [Rhodopseudomonas palustris TIE-1]
          Length = 239

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 64/97 (65%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI
Sbjct: 143 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRGLELSATAVIMVHNHPSGDPTPSQADI 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++I+    PL I VHDHII+GK+   S KGLR+I
Sbjct: 203 QMTKSIVAIAEPLGIAVHDHIIVGKNGHASLKGLRLI 239


>gi|304391571|ref|ZP_07373513.1| putative DNA repair protein RadC-like protein [Ahrensia sp. R2A130]
 gi|303295800|gb|EFL90158.1| putative DNA repair protein RadC-like protein [Ahrensia sp. R2A130]
          Length = 259

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 54/96 (56%), Positives = 70/96 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K N L+ DE    GT+DH P Y REIV+R LE+ AT++ILVHNHPSG+P PS ADI
Sbjct: 163 LYLNKQNGLMDDEEMQEGTVDHTPAYPREIVRRALEVGATAVILVHNHPSGDPTPSRADI 222

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ I T+   +NI VHDHIIIG+D   S K L++
Sbjct: 223 ELTRQINTSCQTMNIAVHDHIIIGRDTHTSMKALQL 258


>gi|295110011|emb|CBL23964.1| DNA replication and repair protein RadC [Ruminococcus obeum A2-162]
          Length = 236

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+ D + S+GT++   +  REI    L   A ++IL+HNHP GNP+PS  D 
Sbjct: 135 MMLDNQNHLLGDTLLSKGTVNATLITPREIFLEALRYHAVNLILIHNHPGGNPSPSVCDK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      L I + DHIIIG   +VSF+   ++
Sbjct: 195 EITERISQAGEMLGICLLDHIIIGDQRYVSFREQGLL 231


>gi|206561051|ref|YP_002231816.1| DNA repair protein RadC [Burkholderia cenocepacia J2315]
 gi|198037093|emb|CAR53014.1| putative DNA repair protein [Burkholderia cenocepacia J2315]
          Length = 209

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N LI  E  +RG++  + VY REIV+R ++ +A ++I+ HNHPSG   PS  D 
Sbjct: 113 VYLDARNRLIDMEEIARGSLTRMAVYPREIVRRAMKHNAAALIVAHNHPSGAVQPSAEDR 172

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G     SF     +
Sbjct: 173 RLTRVLKDALELVDVRLLDHVVVGVSDTFSFARAGWL 209


>gi|150390056|ref|YP_001320105.1| DNA repair protein RadC [Alkaliphilus metalliredigens QYMF]
 gi|172052477|sp|A6TQH8|Y2289_ALKMQ RecName: Full=UPF0758 protein Amet_2289
 gi|149949918|gb|ABR48446.1| DNA repair protein RadC [Alkaliphilus metalliredigens QYMF]
          Length = 232

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 60/96 (62%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L+  + +IA E  S G+++   V+ RE+    ++ S+++IILVHNHPSG+P+PS  DI 
Sbjct: 137 LLNTKHEVIAIENISIGSLNASIVHPREVFVVAIKRSSSAIILVHNHPSGDPSPSGEDIR 196

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ ++     L I V DHIIIG + + S K   ++
Sbjct: 197 ITKRLVEAGKLLGIEVLDHIIIGDNVYYSLKEKSMM 232


>gi|292486886|ref|YP_003529756.1| DNA repair protein radC [Erwinia amylovora CFBP1430]
 gi|292900719|ref|YP_003540088.1| RadC-like protein [Erwinia amylovora ATCC 49946]
 gi|291200567|emb|CBJ47696.1| putative RadC-like protein [Erwinia amylovora ATCC 49946]
 gi|291552303|emb|CBA19340.1| DNA repair protein radC homolog [Erwinia amylovora CFBP1430]
          Length = 156

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + L+  E    GT+    V+ RE+V+  L+ +A ++IL HNHPSG    S  D 
Sbjct: 61  MYLDNQHCLLGCETLFTGTLSQTEVHPREVVKLALKHNAAAVILAHNHPSGTTEISQQDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ I+  L  + + V DH+++G +  VSF    ++
Sbjct: 121 HITQRIVKALALVEVRVLDHLVVG-NEVVSFAEQGLL 156


>gi|49081838|gb|AAT50319.1| PA5319 [synthetic construct]
          Length = 225

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +++ EV  +G+ID   VY R++V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 128 LFLDTRHRVLSFEVLFQGSIDGASVYPRQVVKRTLAHNAAALILTHNHPSGDARPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DH IIG    +S      +
Sbjct: 188 QLTARLKEALALIDVRVLDHFIIGDGEPLSLAEYGWL 224


>gi|315582770|gb|EFU94961.1| DNA repair protein RadC [Enterococcus faecalis TX0309A]
          Length = 240

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 201 QFTKRMEECGEMMGIQLLDHIILGDSGYISLREENF 236


>gi|316931615|ref|YP_004106597.1| DNA repair protein RadC [Rhodopseudomonas palustris DX-1]
 gi|315599329|gb|ADU41864.1| DNA repair protein RadC [Rhodopseudomonas palustris DX-1]
          Length = 237

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 63/97 (64%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI
Sbjct: 141 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRGLELSATAVIMVHNHPSGDPTPSQADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++I+    PL I VHDHII+GK+   S KGL++I
Sbjct: 201 QMTKSIVAIAEPLGIAVHDHIIVGKNGHASLKGLKLI 237


>gi|255527526|ref|ZP_05394394.1| DNA repair protein RadC [Clostridium carboxidivorans P7]
 gi|255508796|gb|EET85168.1| DNA repair protein RadC [Clostridium carboxidivorans P7]
          Length = 228

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N+++  +  S G+++   V+ RE+    +  ++  II+ HNHPSG+P PS+ DI
Sbjct: 132 IMLNTKNVVLFIKDVSVGSLNSSIVHPREVFCDAIRKNSAFIIVCHNHPSGDPQPSNEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      L I + DH+IIG   ++S K   I+
Sbjct: 192 NVTNRLKECGKLLGIELLDHLIIGNGRYISLKEKGIL 228


>gi|157963648|ref|YP_001503682.1| DNA repair protein RadC [Shewanella pealeana ATCC 700345]
 gi|189029404|sp|A8H9B0|Y3837_SHEPA RecName: Full=UPF0758 protein Spea_3837
 gi|157848648|gb|ABV89147.1| DNA repair protein RadC [Shewanella pealeana ATCC 700345]
          Length = 225

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTI+   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTINSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSTADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKQALQTIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|281178374|dbj|BAI54704.1| putative phage DNA repair protein [Escherichia coli SE15]
          Length = 156

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+  E+  RGT++ V V+ RE+++R L+ +A ++ILVHNHPSG P PS  DI
Sbjct: 60  ILLDNQNQLLHREILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDI 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  L++ + DH I+     VS     ++
Sbjct: 120 QLTKKLQELLEILDVRLLDHFIVAGTETVSMAERGLV 156


>gi|15615594|ref|NP_243898.1| DNA repair protein RadC [Bacillus halodurans C-125]
 gi|13431811|sp|Q9K8H4|Y3032_BACHD RecName: Full=UPF0758 protein BH3032
 gi|10175654|dbj|BAB06751.1| DNA repair protein [Bacillus halodurans C-125]
          Length = 232

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +    G+++   V+ RE+ +  L  SA S+I +HNHPSG+P PS  DI
Sbjct: 133 LYLNTKNQVLHKQTVFIGSLNASIVHPREVFKEALRRSAASLICLHNHPSGDPTPSREDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      + I + DH+IIG   FVS K    +
Sbjct: 193 EVTHRLAQVGKLIGIELLDHVIIGDRTFVSLKEKGHL 229


>gi|167621854|ref|YP_001676639.1| DNA repair protein RadC [Caulobacter sp. K31]
 gi|167351595|gb|ABZ74325.1| DNA repair protein RadC [Caulobacter sp. K31]
          Length = 223

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 66/97 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N L++ E    G++DH PVY RE+++R LEL+ +++IL HNHPSG+P PS  DI
Sbjct: 127 LFLDRRNQLLSAERLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +I     L I +HDH+I+   A VSF+   +I
Sbjct: 187 EMTKTLIEAGKALQIQIHDHMIVAGGAVVSFRANGLI 223


>gi|156740065|ref|YP_001430194.1| DNA repair protein RadC [Roseiflexus castenholzii DSM 13941]
 gi|189029400|sp|A7NFF4|Y037_ROSCS RecName: Full=UPF0758 protein Rcas_0037
 gi|156231393|gb|ABU56176.1| DNA repair protein RadC [Roseiflexus castenholzii DSM 13941]
          Length = 233

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 56/96 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +   +    G+++   V I E+ +  + L++ SII+VHNHPSG+P PS  DI
Sbjct: 133 ICLDTKNRVQKIQTVYVGSLNASMVRIGEVFKEAIRLNSASIIVVHNHPSGDPTPSPEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +I     L+I V DH++IG   FVS +   +
Sbjct: 193 VVTRQMIEAGRLLDIDVLDHLVIGNGRFVSMRERGL 228


>gi|322420385|ref|YP_004199608.1| DNA repair protein RadC [Geobacter sp. M18]
 gi|320126772|gb|ADW14332.1| DNA repair protein RadC [Geobacter sp. M18]
          Length = 167

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++  ++ S G++    V+ RE  +  L  SA ++IL+HNHP G+P+PS  D 
Sbjct: 72  LHLDNRNRVVCIDMVSTGSLTSSIVHPRETFKTALLSSAAAMILIHNHPGGDPSPSAEDR 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I + DHII+G   + SF    +I
Sbjct: 132 EVTRRLREAGELLGIRILDHIIVGDF-YFSFAEGGLI 167


>gi|148550394|ref|YP_001270496.1| DNA repair protein RadC [Pseudomonas putida F1]
 gi|148514452|gb|ABQ81312.1| DNA repair protein RadC [Pseudomonas putida F1]
          Length = 235

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   VY RE+V+R L  +A ++IL HNHPSG   PS  D+
Sbjct: 137 LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDV 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T ++   L  +++ V DHIIIG    +S      I
Sbjct: 197 HLTLSLKRGLALIDVRVLDHIIIGDGEPLSMVEHGWI 233


>gi|313206016|ref|YP_004045193.1| DNA repair protein radc [Riemerella anatipestifer DSM 15868]
 gi|312445332|gb|ADQ81687.1| DNA repair protein RadC [Riemerella anatipestifer DSM 15868]
 gi|315022329|gb|EFT35357.1| DNA repair protein RadC [Riemerella anatipestifer RA-YM]
 gi|325336543|gb|ADZ12817.1| DNA repair protein [Riemerella anatipestifer RA-GD]
          Length = 225

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N ++  +  S+G I    V +R + +  LE  AT+II+VHNHPSGN +PS+ D+
Sbjct: 129 IFLNQSNKVLQKKPLSKGGISGTVVDVRLMFKMALEHYATAIIVVHNHPSGNASPSEQDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      L+I + DHIII K+ + SF    ++
Sbjct: 189 EITKKIKEAGVLLDIRLLDHIIIAKNKYFSFADEGVL 225


>gi|297583749|ref|YP_003699529.1| DNA repair protein RadC [Bacillus selenitireducens MLS10]
 gi|297142206|gb|ADH98963.1| DNA repair protein RadC [Bacillus selenitireducens MLS10]
          Length = 228

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL   N +I  +    G+++   V+ REI +  L  SA S+I +HNHPSG+  PS  DI
Sbjct: 132 LFLSTKNQVIHRQTIFIGSLNMSVVHPREIFKAALRYSAASMICIHNHPSGDTAPSQEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ ++     + I V DH+I+G  +F S K    +
Sbjct: 192 DVTKRLVEVGKTIGIDVLDHVIVGDHSFCSLKEKGYV 228


>gi|88797504|ref|ZP_01113093.1| DNA repair protein RadC [Reinekea sp. MED297]
 gi|88779676|gb|EAR10862.1| DNA repair protein RadC [Reinekea sp. MED297]
          Length = 224

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   + ++A E   +GTID   VY RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 IWLSAQHQVLAFETLFQGTIDTAAVYPREVVKAALRHNAAAVILAHNHPSGIAEPSQADQ 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + + L  +++ + DH+++G+   VSF    ++
Sbjct: 188 MITKRLASALMTVDVRLLDHMVVGQGIVVSFAERGLL 224


>gi|309776893|ref|ZP_07671863.1| DNA repair protein RadC [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915304|gb|EFP61074.1| DNA repair protein RadC [Erysipelotrichaceae bacterium 3_1_53]
          Length = 229

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N LIA  V   GT+ +  V+ REI +  ++L    I+ VHNHPSG+P PS ADI
Sbjct: 128 LFLNQKNQLIASRVMFVGTLTNASVHPREIFKEAMQLGCAKILCVHNHPSGDPQPSSADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T++I        I + DHII+ ++ + SF    ++
Sbjct: 188 SLTKSIEECGVMTAIPLIDHIIVSRNTYFSFAQKGML 224


>gi|239996967|ref|ZP_04717491.1| DNA repair protein RadC [Alteromonas macleodii ATCC 27126]
          Length = 225

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LIA      GTI+   VY RE++++ +  +A +IILVHNHPSG   PS ADI
Sbjct: 128 LMLDSQHQLIAFRTMFNGTINSAAVYPRELIKQVMIDNAAAIILVHNHPSGVAEPSHADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I + +  +++ V DH ++G    VSF    ++
Sbjct: 188 RLTAEIKSAMASIDVPVLDHFVVGDKETVSFAQRGLL 224


>gi|114326624|ref|YP_743782.1| DNA repair protein RadC [Nitrosomonas eutropha C91]
 gi|114309563|gb|ABI60804.1| DNA repair protein RadC [Nitrosomonas eutropha C91]
          Length = 173

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+    LIA     +GT+    VY RE+V+  +  +A ++IL H HPS    PS AD 
Sbjct: 77  IFLNSQYRLIAYREMFQGTLTCASVYPREVVKAAISYNAAAVILAHCHPSKETEPSQADK 136

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L+ +++ V DHII+G +   S   + ++
Sbjct: 137 AITKRLKEALDLIDVCVLDHIIVGGNTTKSMAEMGLV 173


>gi|39933462|ref|NP_945738.1| DNA repair protein RadC [Rhodopseudomonas palustris CGA009]
 gi|39647308|emb|CAE25829.1| possible DNA repair protein RadC [Rhodopseudomonas palustris
           CGA009]
          Length = 241

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 64/97 (65%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GT+DH PVY REIV+R LELSAT++I+VHNHPSG+P PS ADI
Sbjct: 145 LFLDKRNQLIADELQQVGTVDHTPVYPREIVKRGLELSATAVIMVHNHPSGDPTPSQADI 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++I+    PL I VHDHII+GK+   S KGLR+I
Sbjct: 205 QMTKSIVAIAEPLGIAVHDHIIVGKNGHASLKGLRLI 241


>gi|172058125|ref|YP_001814585.1| DNA repair protein RadC [Exiguobacterium sibiricum 255-15]
 gi|171990646|gb|ACB61568.1| DNA repair protein RadC [Exiguobacterium sibiricum 255-15]
          Length = 217

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I+ +    G ++   V+ R+I +  +  SA S I VHNHPSG+P PS  DI
Sbjct: 121 LYLNTKNEVISKKTLFIGGLNTSIVHPRDIFREAIRCSAASFIAVHNHPSGDPTPSREDI 180

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +++ ++     + I   DH++IG   F+S K    +
Sbjct: 181 EVSERMVEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217


>gi|291550398|emb|CBL26660.1| DNA replication and repair protein RadC [Ruminococcus torques
           L2-14]
          Length = 240

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI++   S GTI+   V  RE+    L+ +A SIIL+HNHPSG+P PS  D+
Sbjct: 137 LLLNTRSRLISEMDVSTGTINSTLVSPRELFVEALQKNAVSIILLHNHPSGDPTPSKEDL 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ I      + I + DHIIIG + + S +    
Sbjct: 197 LTTRRIREAGALIGIELLDHIIIGDNCYFSLREKGF 232


>gi|114045869|ref|YP_736419.1| DNA repair protein RadC [Shewanella sp. MR-7]
 gi|117922202|ref|YP_871394.1| DNA repair protein RadC [Shewanella sp. ANA-3]
 gi|123030985|sp|Q0HZU3|Y359_SHESR RecName: Full=UPF0758 protein Shewmr7_0359
 gi|166218796|sp|A0L1R9|Y3770_SHESA RecName: Full=UPF0758 protein Shewana3_3770
 gi|113887311|gb|ABI41362.1| DNA repair protein RadC [Shewanella sp. MR-7]
 gi|117614534|gb|ABK49988.1| DNA repair protein RadC [Shewanella sp. ANA-3]
          Length = 225

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|319795329|ref|YP_004156969.1| DNA repair protein radc [Variovorax paradoxus EPS]
 gi|315597792|gb|ADU38858.1| DNA repair protein RadC [Variovorax paradoxus EPS]
          Length = 225

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E   RGT+    VY REIV R L   A +++L HNHPSG+  PS AD 
Sbjct: 129 LFLDAQHRLIVLEELFRGTLTQASVYPREIVMRALHHQAAAVVLAHNHPSGSIEPSRADE 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +   L+ +++ V DH+I+      S     ++
Sbjct: 189 SLTQTLRAALSLVDVRVIDHVIVSPGQSFSMAEKGVL 225


>gi|119470592|ref|ZP_01613295.1| associated with replication fork DNA repair protein
           [Alteromonadales bacterium TW-7]
 gi|119446293|gb|EAW27570.1| associated with replication fork DNA repair protein
           [Alteromonadales bacterium TW-7]
          Length = 224

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+ DE+   GTI+   VY RE+V+  L+ +A ++I  HNHPSG   PS AD 
Sbjct: 128 LYLDSQNRLVKDEILFYGTINAASVYPREVVKAALKNNAAAVIFAHNHPSGIAEPSQADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  ++I V DHII+G +  VSF    +I
Sbjct: 188 LITNKLQQALQLVDINVLDHIIVGGETCVSFAERGLI 224


>gi|84684609|ref|ZP_01012510.1| DNA repair protein RadC [Maritimibacter alkaliphilus HTCC2654]
 gi|84667588|gb|EAQ14057.1| DNA repair protein RadC [Rhodobacterales bacterium HTCC2654]
          Length = 257

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 54/97 (55%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LIADE  + GT+ HVPVY REIV+R LELSA+++ILVHNHPSG+P+PS  DI
Sbjct: 160 LYLDRKNTLIADEAAAEGTVGHVPVYPREIVKRALELSASALILVHNHPSGDPSPSRDDI 219

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ + +    L I +HDHIIIGK   VS++    +
Sbjct: 220 DMTERVRSAAAALEITLHDHIIIGKSREVSYRSDGYL 256


>gi|312143465|ref|YP_003994911.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus']
 gi|311904116|gb|ADQ14557.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus']
          Length = 231

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +IA    S+G +    V+ RE+ +  +  S+ ++ILVHNHPSG+P PS  D+
Sbjct: 135 ILLDVKNRVIAIPEISKGGLSSSIVHPREVFKEAIRRSSAAVILVHNHPSGDPKPSADDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ +      + I V DHIII  D F+SFK   +I
Sbjct: 195 NITKKLQKAGEIIGIKVIDHIIIAGDKFLSFKEENLI 231


>gi|288986959|ref|YP_003456922.1| DNA repair protein RadC [Allochromatium vinosum DSM 180]
 gi|288898338|gb|ADC64172.1| DNA repair protein RadC [Allochromatium vinosum DSM 180]
          Length = 167

 Score =  126 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + ++  +   RGTID   V+ RE+V+  +E  A ++I  HNHPSG+ +PS AD 
Sbjct: 71  LLLDNRHRVLRYQELFRGTIDTAYVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQADR 130

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  + + V DHII+G+   +SF     +
Sbjct: 131 TLTRKLQDALALIEVRVLDHIIVGEGRGMSFAEQGWL 167


>gi|296283428|ref|ZP_06861426.1| hypothetical protein CbatJ_07394 [Citromicrobium bathyomarinum
           JL354]
          Length = 236

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+ D     G+ID   ++ RE+++R L+L A ++ILVHNHPSGNP PS ADI
Sbjct: 140 LYLDTKNRLVQDHHVGDGSIDEASIHPREVIRRGLDLGAAALILVHNHPSGNPEPSRADI 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L I VHDH+IIG+  +VS K   +I
Sbjct: 200 AVTLRIAEAGRLLGIAVHDHVIIGQGRYVSLKAKGLI 236


>gi|188581415|ref|YP_001924860.1| DNA repair protein RadC [Methylobacterium populi BJ001]
 gi|179344913|gb|ACB80325.1| DNA repair protein RadC [Methylobacterium populi BJ001]
          Length = 246

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 62/97 (63%), Positives = 79/97 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ RGT+DH PVY RE+ +R LEL+AT+IIL HNHPSG+P PS ADI
Sbjct: 150 LFLDRRNHLIADEVQGRGTVDHTPVYPREVARRALELAATAIILAHNHPSGDPTPSGADI 209

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I++ L+PL I+VHDH+I+G+D   S KGL++I
Sbjct: 210 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 246


>gi|15600512|ref|NP_254006.1| DNA repair protein RadC [Pseudomonas aeruginosa PAO1]
 gi|13431808|sp|Q9HTN5|Y5319_PSEAE RecName: Full=UPF0758 protein PA5319
 gi|9951636|gb|AAG08704.1|AE004944_8 DNA repair protein RadC [Pseudomonas aeruginosa PAO1]
          Length = 224

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +++ EV  +G+ID   VY R++V+R L  +A ++IL HNHPSG+  PS AD 
Sbjct: 128 LFLDTRHRVLSFEVLFQGSIDGASVYPRQVVKRTLAHNAAALILTHNHPSGDARPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DH IIG    +S      +
Sbjct: 188 QLTARLKEALALIDVRVLDHFIIGDGEPLSLAEYGWL 224


>gi|46202447|ref|ZP_00053202.2| COG2003: DNA repair proteins [Magnetospirillum magnetotacticum
           MS-1]
          Length = 128

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/97 (50%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ  GT+DH P+Y RE+V+R L L A++I++VHNHPSG+P PS AD+
Sbjct: 32  LFLDRKNTLIADEVQQTGTVDHTPLYPREVVKRALALHASAIVMVHNHPSGDPKPSRADM 91

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +   L  + I +HDH+++G+    SFK + ++
Sbjct: 92  EMTRAVKDALAAVGIALHDHVVVGRKGHSSFKAMGLL 128


>gi|163745060|ref|ZP_02152420.1| DNA repair protein RadC [Oceanibulbus indolifex HEL-45]
 gi|161381878|gb|EDQ06287.1| DNA repair protein RadC [Oceanibulbus indolifex HEL-45]
          Length = 237

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 54/97 (55%), Positives = 76/97 (78%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ NILIADE Q++GT+DHVPVY RE+ +R LEL+A++IILVHNHPSG+P+PS +DI
Sbjct: 141 LYLDRKNILIADEEQAKGTVDHVPVYPREVAKRALELNASAIILVHNHPSGDPSPSRSDI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  + T  + L + +HDH+IIGK   +SF+    +
Sbjct: 201 DMTHQVATACDALGLTLHDHLIIGKSRELSFRNEGHL 237


>gi|326202567|ref|ZP_08192435.1| DNA repair protein RadC [Clostridium papyrosolvens DSM 2782]
 gi|325987151|gb|EGD47979.1| DNA repair protein RadC [Clostridium papyrosolvens DSM 2782]
          Length = 229

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N ++     S G+++   V+ RE+    ++    SII VHNHPSG+P PS+ D+
Sbjct: 133 ILLDTKNKVLKIVSISTGSLNASIVHPREVFSEAVKCGCNSIIFVHNHPSGDPTPSNEDV 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  ++   + L I V DHII+G   +VS K    I
Sbjct: 193 RTTDRLVNAGDILGIKVLDHIILGDGRYVSLKEKGFI 229


>gi|330952116|gb|EGH52376.1| hypothetical protein PSYCIT7_12239 [Pseudomonas syringae Cit 7]
          Length = 224

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RG I+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGRINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ V DH+I+G    +S     ++
Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSMVERGLM 224


>gi|227554373|ref|ZP_03984420.1| DNA repair protein RadC [Enterococcus faecalis HH22]
 gi|227176492|gb|EEI57464.1| DNA repair protein RadC [Enterococcus faecalis HH22]
          Length = 198

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 99  IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 158

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 159 QFTKRMEECGEMMGIQLLDHIILGDSGYISLREENF 194


>gi|78067302|ref|YP_370071.1| DNA repair protein RadC [Burkholderia sp. 383]
 gi|123567821|sp|Q39DN9|Y5833_BURS3 RecName: Full=UPF0758 protein Bcep18194_A5833
 gi|77968047|gb|ABB09427.1| DNA replication and repair protein RadC [Burkholderia sp. 383]
          Length = 257

 Score =  126 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + LI  E  +RG++  + VY REIV+R +  +A ++I+ HNHPSG   PS  D 
Sbjct: 161 VYLDARHRLIDMEEITRGSLTRMAVYPREIVRRAMVHNAAALIVAHNHPSGAVQPSAEDR 220

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH++IG     SF     +
Sbjct: 221 RLTRVLHDALALVDVRLLDHVVIGISDTFSFARAGWL 257


>gi|238764329|ref|ZP_04625280.1| DNA repair protein radC [Yersinia kristensenii ATCC 33638]
 gi|238697480|gb|EEP90246.1| DNA repair protein radC [Yersinia kristensenii ATCC 33638]
          Length = 95

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 56/95 (58%)

Query: 3  LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
          +D  + +I  E    GTI  V V+ REIV+  L+++A ++IL HNHPSG   PS AD  M
Sbjct: 1  MDNQHRVIRHEEMFTGTIGSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADRLM 60

Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          T  +I   + L+I V DH+++G+   VSF     +
Sbjct: 61 TTQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL 95


>gi|29377390|ref|NP_816544.1| DNA repair protein RadC [Enterococcus faecalis V583]
 gi|54036236|sp|Q82ZX1|Y2926_ENTFA RecName: Full=UPF0758 protein EF_2926
 gi|29344857|gb|AAO82614.1| DNA repair protein RadC [Enterococcus faecalis V583]
          Length = 232

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 133 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 193 QFTKRMEECGEMMGIQLLDHIILGDSGYISLREENF 228


>gi|290477301|ref|YP_003470222.1| putative associated with replication fork, DNA repair protein
           [Xenorhabdus bovienii SS-2004]
 gi|289176655|emb|CBJ83464.1| putative associated with replication fork, DNA repair protein
           [Xenorhabdus bovienii SS-2004]
          Length = 230

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/97 (46%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL   N +I  +   +GTI+ V V+ REIV++ ++++A SIIL HNHPSGNP PS AD 
Sbjct: 134 LFLTNQNKVICHDEMFKGTINKVEVHPREIVKQAVKVNAASIILAHNHPSGNPEPSLADK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II     + + V DHI+IGK   VSF     I
Sbjct: 194 LVTEKIIDACELVGVKVLDHIVIGKQHCVSFVERGWI 230


>gi|115522133|ref|YP_779044.1| DNA repair protein RadC [Rhodopseudomonas palustris BisA53]
 gi|115516080|gb|ABJ04064.1| DNA repair protein RadC [Rhodopseudomonas palustris BisA53]
          Length = 238

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/97 (64%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+Q  GTIDH PVY REIV+R LELSA++I++VHNHPSG+P PS +DI
Sbjct: 142 LFLDKRNQLIADELQQVGTIDHTPVYPREIVKRALELSASAIVMVHNHPSGDPTPSQSDI 201

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II   +PL I VHDHII+GK+   S KGL++I
Sbjct: 202 QMTKQIIAIADPLGIAVHDHIIVGKNGHASLKGLKLI 238


>gi|197301738|ref|ZP_03166808.1| hypothetical protein RUMLAC_00464 [Ruminococcus lactaris ATCC
           29176]
 gi|197299178|gb|EDY33708.1| hypothetical protein RUMLAC_00464 [Ruminococcus lactaris ATCC
           29176]
          Length = 238

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+    LI     S GT++   V  RE+    L+ +A SIIL+HNHPSG+P PS  DI
Sbjct: 137 LLLNTKAKLIGASDISVGTVNATLVSPRELFLEALKKNAVSIILLHNHPSGDPTPSQEDI 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +TQ +    + + I + DHIIIG + ++S +    
Sbjct: 197 LLTQRVRKAGDLIGIELLDHIIIGDNRYISLREKGF 232


>gi|325263906|ref|ZP_08130639.1| DNA repair protein RadC [Clostridium sp. D5]
 gi|324030944|gb|EGB92226.1| DNA repair protein RadC [Clostridium sp. D5]
          Length = 231

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+    LI +   S+GT++   +  RE+    L+ +A SI+L+HNHPSG+P PS  DI
Sbjct: 135 LLLNTKTRLIGETDISKGTVNSAVISPRELFVEALQKNAVSIVLLHNHPSGDPAPSKDDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I + DHI+IG + ++S +   +I
Sbjct: 195 LVTRRIKDAGALIGIELLDHIVIGNNCYISMREKGLI 231


>gi|260877938|ref|ZP_05890293.1| DNA repair protein [Vibrio parahaemolyticus AN-5034]
 gi|308089871|gb|EFO39566.1| DNA repair protein [Vibrio parahaemolyticus AN-5034]
          Length = 157

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I  +   +GTID   VY RE+V+  LE++A ++IL HNHPSG+P+PS AD 
Sbjct: 62  LLLDNQHRVIEFKSLFKGTIDSASVYPREVVKSVLEVNAAAVILAHNHPSGDPSPSQADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I  L  +++ V DHI++G+ + VSF     +
Sbjct: 122 RITRKLIDALALVDVRVLDHIVVGESS-VSFAEKGWL 157


>gi|300690691|ref|YP_003751686.1| DNA repair protein radC homolog, associated with replication fork
           [Ralstonia solanacearum PSI07]
 gi|299077751|emb|CBJ50389.1| DNA repair protein radC homolog, associated with replication fork
           [Ralstonia solanacearum PSI07]
          Length = 224

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 59/95 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GT+    VY REI +R L  +A+++IL HNHP+G+  PS++D+
Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALYHNASAVILSHNHPTGHVEPSESDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +   L  L++ + DH+I+G+    SF    
Sbjct: 188 MLTRELCRALALLDVRILDHMIVGRTQVYSFLEHG 222


>gi|188990452|ref|YP_001902462.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167732212|emb|CAP50404.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris]
          Length = 159

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 56/96 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E    GTID   V+ R + +R LELSA ++IL HNHPSGNP PS+AD 
Sbjct: 63  LFLDTQHQVLTTEHLFTGTIDGCDVHPRVVARRALELSAAAVILFHNHPSGNPEPSEADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +   L  L+I + DH++IG     S      
Sbjct: 123 KVTERLKQALGLLDIRLLDHLVIGGRQHTSLAARGW 158


>gi|120609194|ref|YP_968872.1| DNA repair protein RadC [Acidovorax citrulli AAC00-1]
 gi|120587658|gb|ABM31098.1| DNA repair protein RadC [Acidovorax citrulli AAC00-1]
          Length = 167

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N  IA E   RGTI+   VY R IV+R ++L+A+S+ILVHNHPSG    SDAD 
Sbjct: 71  VFLDCQNRAIAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADR 130

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I  +L  +++ V DH+I+G     SF    ++
Sbjct: 131 GLTERICASLGLIDVRVVDHVIVGSGTPYSFAEAGLL 167


>gi|126724639|ref|ZP_01740482.1| DNA repair protein RadC [Rhodobacterales bacterium HTCC2150]
 gi|126705803|gb|EBA04893.1| DNA repair protein RadC [Rhodobacterales bacterium HTCC2150]
          Length = 253

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/97 (57%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LI DE   RGT+DHVPVY RE+ +R LE+SA+++ILVHNHPSG+P PS  DI
Sbjct: 157 LFLDRKNVLITDEALGRGTVDHVPVYPREVAKRGLEVSASAVILVHNHPSGDPTPSGPDI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MTQ I   L  L I +HDH+IIGK   +SF+   +I
Sbjct: 217 QMTQEIDNALTTLGIKLHDHLIIGKFGEISFRAEGLI 253


>gi|254419921|ref|ZP_05033645.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
 gi|196186098|gb|EDX81074.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
          Length = 228

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/97 (51%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+L+ DE  + GT+DH PVY RE+V+R LELSA+++ILVHNHPSG+P PS ADI
Sbjct: 132 LYLDRRNLLLKDEWVADGTVDHAPVYPREVVRRALELSASAMILVHNHPSGDPAPSRADI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ ++       + VHDH+++G++   SFK L +I
Sbjct: 192 EMTRRVVDAARVFGLDVHDHLVVGREGTASFKSLGLI 228


>gi|127514409|ref|YP_001095606.1| DNA repair protein RadC [Shewanella loihica PV-4]
 gi|126639704|gb|ABO25347.1| DNA repair protein RadC [Shewanella loihica PV-4]
          Length = 233

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 136 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGGAEPSHADR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 196 RITERLKYALATIDVSLLDHMVVGDREIVSFAERGWI 232


>gi|224476750|ref|YP_002634356.1| putative DNA repair protein RadC [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254789659|sp|B9DNE3|Y1264_STACT RecName: Full=UPF0758 protein Sca_1264
 gi|222421357|emb|CAL28171.1| putative DNA repair protein RadC [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 226

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N++I  EV   GT++   V+ RE+ +  ++ S+ +II+VHNHPSG+  PS  DI
Sbjct: 128 LFLNSKNVVIRHEVIFVGTLNSSIVHPREVFKAAIKWSSNAIIVVHNHPSGDVTPSKEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      L I + DHIIIG   ++S      
Sbjct: 188 LTTKRLQECGRVLGIELLDHIIIGDAKYLSMVEGGY 223


>gi|124004623|ref|ZP_01689467.1| DNA repair protein RadC [Microscilla marina ATCC 23134]
 gi|123989746|gb|EAY29275.1| DNA repair protein RadC [Microscilla marina ATCC 23134]
          Length = 266

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+K N++I  E  S G +       + I ++ +E  A+SII+VHNHPSGN  PS ADI
Sbjct: 170 VMLNKSNVVIKKEQISSGGVSGTIADPKVIFKKAIEALASSIIVVHNHPSGNLQPSQADI 229

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L+I V DH+I     + SF    ++
Sbjct: 230 GLTRKLAEAGKMLDIPVLDHMIFTDYNYYSFADEGMM 266


>gi|172048651|sp|A5WB02|Y5194_PSEP1 RecName: Full=UPF0758 protein Pput_5194
          Length = 226

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   VY RE+V+R L  +A ++IL HNHPSG   PS  D+
Sbjct: 128 LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T ++   L  +++ V DHIIIG    +S      I
Sbjct: 188 HLTLSLKRGLALIDVRVLDHIIIGDGEPLSMVEHGWI 224


>gi|332139456|ref|YP_004425194.1| DNA repair protein RadC [Alteromonas macleodii str. 'Deep ecotype']
 gi|238693291|sp|B4S2B7|Y049_ALTMD RecName: Full=UPF0758 protein MADE_00049
 gi|327549478|gb|AEA96196.1| DNA repair protein RadC [Alteromonas macleodii str. 'Deep ecotype']
          Length = 225

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LIA      GTI+   VY RE++++ +  +A +IILVHNHPSG   PS ADI
Sbjct: 128 LMLDSQHQLIAFRTMFNGTINSAAVYPRELIKQVMIDNAAAIILVHNHPSGVAEPSHADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I + +  +++ V DH ++G    +SF    ++
Sbjct: 188 RLTTEIKSAMASIDVPVLDHFVVGDKETISFAQRGLL 224


>gi|228967535|ref|ZP_04128562.1| DNA repair protein radC [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228792190|gb|EEM39765.1| DNA repair protein radC [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 102

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 6   LYLNTKNQVLHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 65

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 66  EVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 102


>gi|154504386|ref|ZP_02041124.1| hypothetical protein RUMGNA_01890 [Ruminococcus gnavus ATCC 29149]
 gi|153795315|gb|EDN77735.1| hypothetical protein RUMGNA_01890 [Ruminococcus gnavus ATCC 29149]
          Length = 231

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI +   S+GT++   +  RE+    L+ +A SI+L+HNHPSG+P PS  D+
Sbjct: 134 LLLNTKSRLIGETDISKGTVNSAVISPRELFVEALQKNAVSIVLLHNHPSGDPTPSKEDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + + + DHI+IG + +VS +   ++
Sbjct: 194 LITRRIQEAGRLIGVELLDHIVIGDNCYVSLREKGLV 230


>gi|319898913|ref|YP_004159006.1| DNA repair protein RadC [Bartonella clarridgeiae 73]
 gi|319402877|emb|CBI76428.1| DNA repair protein RadC [Bartonella clarridgeiae 73]
          Length = 261

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI+DEVQ  GTIDH PVY RE++ R LELSA+ +IL+HNHPSGN +PS ADI
Sbjct: 165 LFLDKRNGLISDEVQQTGTIDHTPVYPREVISRALELSASGLILIHNHPSGNASPSKADI 224

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +    N L I +HDHIII ++ + SFK L++I
Sbjct: 225 SMTYRLKDAANALEITIHDHIIIARNNYTSFKELKLI 261


>gi|103486559|ref|YP_616120.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256]
 gi|98976636|gb|ABF52787.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256]
          Length = 272

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/97 (46%), Positives = 68/97 (70%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N+LI DE+ S G+ID   +Y+RE+++R LEL A++II+VHNHPSG+P PS  DI
Sbjct: 176 LYLNSRNMLIRDELASEGSIDQSAIYVREVIRRALELGASAIIIVHNHPSGSPEPSRQDI 235

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      L I++HDHII+    + SF+ L ++
Sbjct: 236 AVTREIAEAGTRLGIVLHDHIIVAGSDYRSFRALGLL 272


>gi|256850919|ref|ZP_05556308.1| DNA repair protein RadC [Lactobacillus jensenii 27-2-CHN]
 gi|260661133|ref|ZP_05862047.1| DNA repair protein RadC [Lactobacillus jensenii 115-3-CHN]
 gi|282934169|ref|ZP_06339447.1| DNA repair protein RadC [Lactobacillus jensenii 208-1]
 gi|297205797|ref|ZP_06923192.1| DNA repair protein RadC [Lactobacillus jensenii JV-V16]
 gi|256615981|gb|EEU21169.1| DNA repair protein RadC [Lactobacillus jensenii 27-2-CHN]
 gi|260548070|gb|EEX24046.1| DNA repair protein RadC [Lactobacillus jensenii 115-3-CHN]
 gi|281301783|gb|EFA94049.1| DNA repair protein RadC [Lactobacillus jensenii 208-1]
 gi|297148923|gb|EFH29221.1| DNA repair protein RadC [Lactobacillus jensenii JV-V16]
          Length = 207

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N ++ + +  +GT++   V+ R+I +  +  ++  I++ HNHPSG+ NPS  DI
Sbjct: 111 IYLDNKNKVLGERLLFQGTVNRSVVHPRDIFRWAVFYNSVGILIAHNHPSGDANPSQKDI 170

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ I    + + I   DHII+   +++SFK  ++I
Sbjct: 171 EFTKQINKASDLMGINFLDHIIVADRSYLSFKEEQLI 207


>gi|81428462|ref|YP_395462.1| DNA repair protein (RadC) [Lactobacillus sakei subsp. sakei 23K]
 gi|123564345|sp|Q38XC8|Y852_LACSS RecName: Full=UPF0758 protein LCA_0852
 gi|78610104|emb|CAI55153.1| DNA repair protein (RadC) [Lactobacillus sakei subsp. sakei 23K]
          Length = 224

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    GT++    + RE+ +  ++ SA   ILVHNHPSG   PS  DI
Sbjct: 126 VYLDVKNQIIQIKQLYLGTLNSSVAHPREVFKWAVQYSAAKFILVHNHPSGQLAPSTQDI 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N T+ I+     + I   DH+IIG   ++S +    +
Sbjct: 186 NFTKRIVNCGQLMGITCLDHLIIGSSQYLSLREEGYL 222


>gi|20807378|ref|NP_622549.1| DNA repair proteins [Thermoanaerobacter tengcongensis MB4]
 gi|25009024|sp|Q8RBC5|Y897_THETN RecName: Full=UPF0758 protein TTE0897
 gi|20515897|gb|AAM24153.1| DNA repair proteins [Thermoanaerobacter tengcongensis MB4]
          Length = 233

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E SA+SIILVHNHPSG+P PS  D+
Sbjct: 134 VMLNVKNKIIAIETISIGSLNTSIVHPREVFKAAIERSASSIILVHNHPSGDPTPSREDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ ++   N L I V DH+IIG    +S K    
Sbjct: 194 EVTKRLVEAGNILGIKVLDHVIIGDGRGISLKEKGY 229


>gi|189423347|ref|YP_001950524.1| DNA repair protein RadC [Geobacter lovleyi SZ]
 gi|189419606|gb|ACD94004.1| DNA repair protein RadC [Geobacter lovleyi SZ]
          Length = 163

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++  +  S G+++   V+ RE+ +     +A +++LVHNHP+G+P PS  DI
Sbjct: 67  LHLDGKNRIVCFDRVSIGSLNQAIVHSREVFKTACLSNAAAVLLVHNHPTGDPTPSQEDI 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +  +   L I V DHII+G D F+SF    ++
Sbjct: 127 AITRRLKESGEILGIKVLDHIIVGDDEFLSFVERGLL 163


>gi|56475876|ref|YP_157465.1| DNA repair protein, radC [Aromatoleum aromaticum EbN1]
 gi|81677578|sp|Q5P7Z7|Y442_AZOSE RecName: Full=UPF0758 protein AZOSEA04420
 gi|56311919|emb|CAI06564.1| DNA repair protein, radC [Aromatoleum aromaticum EbN1]
          Length = 225

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI      RGT+    VY RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LLLDARNRLIEAVELFRGTLTQTSVYPREVVKLALARNAAAVILAHNHPSGAAEPSPADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKD-AFVSFKGLRII 97
            +T+++   L  ++I V DH I+      +SF    ++
Sbjct: 188 LLTRSLKQALELVDIRVLDHFIVTAHAQPLSFAERGLL 225


>gi|332036123|gb|EGI72599.1| DNA repair protein RadC [Pseudoalteromonas haloplanktis ANT/505]
          Length = 224

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+ DE+   GTI+   VY RE+V+  L+ +A ++I  HNHPSG   PS AD 
Sbjct: 128 LYLDSQNRLVKDEILFYGTINSASVYPREVVKAALKNNAAAVIFAHNHPSGIAEPSQADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  ++I V DHII+G +  VSF    +I
Sbjct: 188 LITNKLQQALQLVDISVLDHIIVGGETCVSFAERGLI 224


>gi|225567950|ref|ZP_03776975.1| hypothetical protein CLOHYLEM_04023 [Clostridium hylemonae DSM
           15053]
 gi|225163238|gb|EEG75857.1| hypothetical protein CLOHYLEM_04023 [Clostridium hylemonae DSM
           15053]
          Length = 230

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI +   S+GT++   +  RE+    L+ +A +II++HNHPSG+P+PS  D 
Sbjct: 134 LMLNSKSKLIGETDISKGTVNASLITPRELFIEALQKNAVAIIVLHNHPSGDPSPSREDR 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I      + I + DH+IIG + ++SF+   I+
Sbjct: 194 LLTQRIREAGALIGIDLLDHVIIGNNCYMSFREEGIL 230


>gi|26991960|ref|NP_747385.1| DNA repair protein RadC [Pseudomonas putida KT2440]
 gi|37999603|sp|Q88C97|Y5284_PSEPK RecName: Full=UPF0758 protein PP_5284
 gi|24987089|gb|AAN70849.1|AE016729_7 DNA repair protein RadC [Pseudomonas putida KT2440]
          Length = 226

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   VY RE+V+R L  +A ++IL HNHPSG   PS  D+
Sbjct: 128 LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T ++   L  +++ V DHIIIG    +S      I
Sbjct: 188 HLTLSLKRGLALIDVRVLDHIIIGDGEPLSMVEHGWI 224


>gi|289434829|ref|YP_003464701.1| DNA repair protein RadC [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171073|emb|CBH27615.1| DNA repair protein RadC [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 224

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +I  +    G ++   V+ RE+ +  L  SA S++  HNHPSG+P+PS  D+
Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASLMCFHNHPSGDPSPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ ++   N + I + DHIIIGK+ ++S K    
Sbjct: 188 LVTKRLVEAGNIIGITLLDHIIIGKNKYISLKEKGY 223


>gi|85712366|ref|ZP_01043416.1| DNA repair protein RadC [Idiomarina baltica OS145]
 gi|85693809|gb|EAQ31757.1| DNA repair protein RadC [Idiomarina baltica OS145]
          Length = 157

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + +D  + LI  +    GTI+  PVY RE+++  L+ +A +IIL HNHPSG   PS+AD 
Sbjct: 62  MLMDSQHRLIEYKELFFGTINAAPVYPREVMKEVLQQNAAAIILAHNHPSGVTEPSEADK 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   LN +++ V DHI++G+D  VSF    ++
Sbjct: 122 RVTTRIKDALNHIDVPVLDHIVVGQDT-VSFAERGLV 157


>gi|319405664|emb|CBI79287.1| DNA repair protein RadC [Bartonella sp. AR 15-3]
          Length = 264

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/97 (58%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI+DEVQ  GTIDH PVY RE++ R L+LSA+ +IL+HNHPSGN +PS ADI
Sbjct: 168 LFLDKRNGLISDEVQQTGTIDHTPVYPREVISRALQLSASGLILIHNHPSGNASPSKADI 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +    N L I +HDHIII ++ + SFK L++I
Sbjct: 228 SMTHRLKDAANALEITIHDHIIIARNNYTSFKELKLI 264


>gi|315303311|ref|ZP_07873944.1| putative DNA repair protein [Listeria ivanovii FSL F6-596]
 gi|313628326|gb|EFR96826.1| putative DNA repair protein [Listeria ivanovii FSL F6-596]
          Length = 224

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 56/96 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +I  +    G ++   V+ RE+ +  L  SA SI+  HNHPSG+P PS  D+
Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPTPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ ++   + + I + DHIIIGK+ ++S K    
Sbjct: 188 LVTKRLVEAGSIIGITLLDHIIIGKNKYISLKEKGY 223


>gi|258516472|ref|YP_003192694.1| DNA repair protein RadC [Desulfotomaculum acetoxidans DSM 771]
 gi|257780177|gb|ACV64071.1| DNA repair protein RadC [Desulfotomaculum acetoxidans DSM 771]
          Length = 233

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +++ E  S GT+    V+ RE+ +  ++ SA ++IL+HNHPSG+P PS  DI
Sbjct: 137 MLLNTKNRVLSLETISVGTLSSSAVHPRELFKIAIKKSAAALILIHNHPSGDPAPSKEDI 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ +      + I V DHIIIG + FVS K   +
Sbjct: 197 DVTKRLEEAGKIIGIDVLDHIIIGDNKFVSLKVKGL 232


>gi|299065959|emb|CBJ37140.1| DNA repair protein radC homolog, associated with replication fork
           [Ralstonia solanacearum CMR15]
          Length = 224

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 59/95 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GT+    VY REI +R L  +A+++IL HNHP+G+  PS++D+
Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALHHNASALILSHNHPTGHVEPSESDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +   L  L++ V DH+I+G+    SF    
Sbjct: 188 MLTRELCRALALLDVRVLDHMIVGRAEVYSFLEHG 222


>gi|319408552|emb|CBI82205.1| DNA repair protein RadC [Bartonella schoenbuchensis R1]
          Length = 264

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/97 (60%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N L++DEVQ  GTIDH PVY RE+V R LELSA+ +ILVHNHPSG+  PSDADI
Sbjct: 168 LFLDKKNGLLSDEVQQTGTIDHTPVYPREVVSRALELSASGLILVHNHPSGDATPSDADI 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +    N L II+HDH+II ++ + SFK L++I
Sbjct: 228 SMTYRLKDIANALGIILHDHLIIARNDYTSFKALKLI 264


>gi|116872978|ref|YP_849759.1| DNA repair protein RadC [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123461096|sp|A0AIZ8|Y1562_LISW6 RecName: Full=UPF0758 protein lwe1562
 gi|116741856|emb|CAK20980.1| DNA repair protein RadC homolog [Listeria welshimeri serovar 6b
           str. SLCC5334]
          Length = 224

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 56/96 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +I  +    G ++   V+ RE+ +  L  S+ +I+  HNHPSG+P PS  D+
Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSSAAIMCFHNHPSGDPTPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ ++   N + I + DHIIIGK+ ++S K    
Sbjct: 188 LVTKRLVEAGNIIGITLLDHIIIGKNKYISLKEKGY 223


>gi|313623636|gb|EFR93796.1| putative DNA repair protein [Listeria innocua FSL J1-023]
          Length = 224

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +I  +    G ++   V+ RE+ +  L  S+ SI+  HNHPSG+P PS  D+
Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSSASIMCFHNHPSGDPTPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +    N + I + DHIIIGK+ ++S K    
Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223


>gi|170719373|ref|YP_001747061.1| DNA repair protein RadC [Pseudomonas putida W619]
 gi|229485561|sp|B1J4M1|Y186_PSEPW RecName: Full=UPF0758 protein PputW619_0186
 gi|169757376|gb|ACA70692.1| DNA repair protein RadC [Pseudomonas putida W619]
          Length = 226

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   +Y RE+V+R L  +A ++IL HNHPSGN  PS  D+
Sbjct: 128 LFLDSKHRPLAFEILFRGTIDRASIYPREVVRRSLMHNAAALILCHNHPSGNSEPSQDDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +   L  +++ V DHII+G    +S      I
Sbjct: 188 HMTLALKRGLALIDVRVLDHIIVGDGEPLSMVEQGWI 224


>gi|315127738|ref|YP_004069741.1| replication fork DNA repair protein-associated protein
           [Pseudoalteromonas sp. SM9913]
 gi|315016252|gb|ADT69590.1| replication fork DNA repair protein-associated protein
           [Pseudoalteromonas sp. SM9913]
          Length = 224

 Score =  125 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+ DE+   GTI+   VY RE+V+  L+ +A ++I  HNHPSG   PS AD 
Sbjct: 128 LYLDSQNRLLKDEILFYGTINAASVYPREVVKAALKNNAAAVIFSHNHPSGIAEPSQADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  ++I V DHIIIG ++ VSF    +I
Sbjct: 188 LITNKLCQALQLVDINVLDHIIIGGESSVSFAERGLI 224


>gi|152983064|ref|YP_001352677.1| DNA repair protein RadC [Janthinobacterium sp. Marseille]
 gi|151283141|gb|ABR91551.1| DNA repair protein RadC [Janthinobacterium sp. Marseille]
          Length = 190

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  + ++A E    GTI    VY R IVQR + L+A S+IL HNHPSG+ +PS+AD 
Sbjct: 93  VFMDTQHRVLAYEPLFFGTIHQTSVYPRAIVQRAMSLNAASMILAHNHPSGSTHPSEADK 152

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  + + L  +++ V DH IIG++   SF    ++
Sbjct: 153 QLTNRLKSLLESIDVRVLDHFIIGEEGTFSFAEHGLL 189


>gi|167036321|ref|YP_001671552.1| DNA repair protein RadC [Pseudomonas putida GB-1]
 gi|189029399|sp|B0KQ87|Y5335_PSEPG RecName: Full=UPF0758 protein PputGB1_5335
 gi|166862809|gb|ABZ01217.1| DNA repair protein RadC [Pseudomonas putida GB-1]
          Length = 226

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   VY RE+V+R L  +A ++IL HNHPSG+  PS  D+
Sbjct: 128 LFLDSKHRPLAFEILFRGTIDRASVYPREVVRRALLHNAAALILCHNHPSGSSEPSQDDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T ++   L  +++ V DHIIIG    +S      I
Sbjct: 188 HLTLSLKRGLALIDVRVLDHIIIGDGEPLSMVEHGWI 224


>gi|313633115|gb|EFS00011.1| putative DNA repair protein [Listeria seeligeri FSL N1-067]
 gi|313637692|gb|EFS03068.1| putative DNA repair protein [Listeria seeligeri FSL S4-171]
          Length = 224

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +I  +    G ++   V+ RE+ +  L  SA S++  HNHPSG+P+PS  D+
Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASLMCFHNHPSGDPSPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ ++   N + I + DHIIIGK+ ++S K    
Sbjct: 188 LVTKRLVEAGNIIGITLLDHIIIGKNKYISLKEKGY 223


>gi|119898338|ref|YP_933551.1| DNA repair protein [Azoarcus sp. BH72]
 gi|119670751|emb|CAL94664.1| DNA repair protein [Azoarcus sp. BH72]
          Length = 196

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI  E   RGT+    VY REI++R LEL A  +I  H HPSG   PS AD 
Sbjct: 100 LYLDAQNRLIRAEEAFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADE 159

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  + + L  +++ V DHI++  D  VSF     +
Sbjct: 160 VLTNMLKSALTLVDVRVLDHIVVAGDRAVSFAETGRL 196


>gi|167758182|ref|ZP_02430309.1| hypothetical protein CLOSCI_00520 [Clostridium scindens ATCC 35704]
 gi|167664079|gb|EDS08209.1| hypothetical protein CLOSCI_00520 [Clostridium scindens ATCC 35704]
          Length = 230

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI +   S+GT++   +  RE+    L+ +A SI+++HNHPSG+P PS  D+
Sbjct: 134 LMLNSKSRLIGETDISKGTVNASLITPRELFIEALQKNAVSIVIMHNHPSGDPTPSREDM 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ I+     + I + DHIIIG + ++SF+   ++
Sbjct: 194 LTTKRILDAGALIGIELLDHIIIGNNCYISFREEGLL 230


>gi|17547163|ref|NP_520565.1| DNA repair protein RadC [Ralstonia solanacearum GMI1000]
 gi|25009031|sp|Q8XWN0|Y2444_RALSO RecName: Full=UPF0758 protein RSc2444
 gi|17429465|emb|CAD16151.1| probable dna repair protein radc homolog [Ralstonia solanacearum
           GMI1000]
          Length = 224

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 59/95 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GT+    VY REI +R L  +A+++IL HNHP+G+  PS++D+
Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALHHNASALILSHNHPTGHVEPSESDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +   L  L++ V DH+I+G+    SF    
Sbjct: 188 VLTRELCRALALLDVRVLDHMIVGRAEVYSFLEHG 222


>gi|124267880|ref|YP_001021884.1| DNA repair protein RadC [Methylibium petroleiphilum PM1]
 gi|171769841|sp|A2SJB0|Y2695_METPP RecName: Full=UPF0758 protein Mpe_A2695
 gi|124260655|gb|ABM95649.1| DNA repair protein radC family [Methylibium petroleiphilum PM1]
          Length = 222

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+A E   RGT++   VY RE+V+R L L+A + IL HNHPSG   PS AD 
Sbjct: 126 LFLDTQHRLLAFEELFRGTLNQASVYPREVVKRALALNAAAAILAHNHPSGVAEPSRADE 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH ++ + + VSF    ++
Sbjct: 186 ALTQALKAALALVDVRVLDHFVVARGSVVSFAERGLL 222


>gi|302386425|ref|YP_003822247.1| DNA repair protein RadC [Clostridium saccharolyticum WM1]
 gi|302197053|gb|ADL04624.1| DNA repair protein RadC [Clostridium saccharolyticum WM1]
          Length = 231

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 59/96 (61%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L+    LI D + S+GT++   V  REI    ++  A S++LVHNHPSG+P+PS  D++
Sbjct: 136 LLNTKGSLIRDIMISQGTVNASAVSPREIFIEAMKYHAVSLVLVHNHPSGDPSPSREDLS 195

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            T+ +    + + I + DHIIIG ++++S K   I+
Sbjct: 196 FTRRVKEAGDLVGIRLLDHIIIGDNSYISLKERGIL 231


>gi|240138796|ref|YP_002963269.1| DNA repair protein RadC [Methylobacterium extorquens AM1]
 gi|240008766|gb|ACS39992.1| DNA repair protein RadC [Methylobacterium extorquens AM1]
          Length = 248

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/97 (61%), Positives = 78/97 (80%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEV  RGT+DH PVY RE+ +R LEL++T+IIL HNHPSG+P PS ADI
Sbjct: 152 LFLDRRNHLIADEVLGRGTVDHTPVYPREVARRALELASTAIILAHNHPSGDPAPSKADI 211

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I++ L+PL I+VHDH+I+G+D   S KGL++I
Sbjct: 212 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 248


>gi|212635015|ref|YP_002311540.1| DNA repair protein RadC [Shewanella piezotolerans WP3]
 gi|226736630|sp|B8CM29|Y2203_SHEPW RecName: Full=UPF0758 protein swp_2203
 gi|212556499|gb|ACJ28953.1| DNA repair protein RadC [Shewanella piezotolerans WP3]
          Length = 225

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTI+   VY R++V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTINSASVYPRDVVGLVLEKKAAAVIVCHNHPSGIAEPSTADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKQALQTIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|91791693|ref|YP_561344.1| DNA repair protein RadC [Shewanella denitrificans OS217]
 gi|122969048|sp|Q12SF5|Y326_SHEDO RecName: Full=UPF0758 protein Sden_0326
 gi|91713695|gb|ABE53621.1| DNA repair protein RadC [Shewanella denitrificans OS217]
          Length = 225

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKRAAAVIICHNHPSGIAEPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     +
Sbjct: 188 RITERLKNALATIDVSLLDHMVVGDFEIVSFAERGWL 224


>gi|253583728|ref|ZP_04860926.1| DNA repair protein RadC [Fusobacterium varium ATCC 27725]
 gi|251834300|gb|EES62863.1| DNA repair protein RadC [Fusobacterium varium ATCC 27725]
          Length = 229

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/97 (48%), Positives = 63/97 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N LIA E    GTID   VY REIV+R ++  A S++  HNHPSGN +PS  DI
Sbjct: 131 LFLNSANNLIASETLFYGTIDKSAVYPREIVERVIKNGAKSVVFAHNHPSGNISPSKQDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ++  +L  L+I + DHIII KD++ SF    +I
Sbjct: 191 ELTQHMYDSLKTLDIRLIDHIIITKDSYFSFLEEGLI 227


>gi|83649010|ref|YP_437445.1| DNA repair protein [Hahella chejuensis KCTC 2396]
 gi|83637053|gb|ABC33020.1| DNA repair protein [Hahella chejuensis KCTC 2396]
          Length = 207

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/98 (45%), Positives = 62/98 (63%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI+ E    GTID   VY REIV+R L L+A ++IL HNHPSG   PS ADI
Sbjct: 108 MFLDNQNRLISFEKLFYGTIDQASVYPREIVKRALMLNAAAVILAHNHPSGMSEPSVADI 167

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
            MT+ + ++L  +++ V DHI++G   + VSF     +
Sbjct: 168 AMTKTVKSSLALIDVRVLDHIVVGSDGSSVSFIERGYM 205


>gi|294084235|ref|YP_003550993.1| DNA repair protein RadC [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663808|gb|ADE38909.1| DNA repair protein RadC [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 247

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/97 (50%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LIA+E  S+GT+D  PVY+RE+V   L+  A S ILVHNHPSG   PS ADI
Sbjct: 151 LCLDNQNRLIAEETLSKGTVDQTPVYVREVVNAALKHHAQSSILVHNHPSGEAEPSRADI 210

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I   LN ++I +HDH+I+     VS K L  +
Sbjct: 211 EMTLAIQDALNIMSINLHDHLIVAGKQCVSLKTLGYL 247


>gi|257094371|ref|YP_003168012.1| DNA repair protein RadC [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257046895|gb|ACV36083.1| DNA repair protein RadC [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 225

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LIA E   RGT+    VY RE+V++ L  +A +++L HNHPSG   PS AD 
Sbjct: 128 LWLDAQNRLIASEELFRGTLTQTSVYPREVVKKALYHNAAAVVLAHNHPSGVAEPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRII 97
            +T ++   L  + + V DH I+   +  +SF    ++
Sbjct: 188 LLTADLKQVLALVEVRVLDHFIVAAQSPPLSFAERGLL 225


>gi|90419162|ref|ZP_01227072.1| DNA repair protein [Aurantimonas manganoxydans SI85-9A1]
 gi|90336099|gb|EAS49840.1| DNA repair protein [Aurantimonas manganoxydans SI85-9A1]
          Length = 257

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 69/97 (71%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 161 LFLDKKNALIADEVQGTGTVDHTPVYTREVVKRGLELSATAIILVHNHPSGDPTPSRADI 220

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ II T  PL I VHDHIIIGK+   S KGLR+I
Sbjct: 221 EMTRTIIDTAKPLGIAVHDHIIIGKNGHASLKGLRLI 257


>gi|319404226|emb|CBI77819.1| DNA repair protein RadC [Bartonella rochalimae ATCC BAA-1498]
          Length = 264

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI+DEVQ  GTIDH PVY RE++ R LELSA+ +IL+HNHPSGN +PS ADI
Sbjct: 168 LFLDKRNGLISDEVQQTGTIDHTPVYPREVISRALELSASGLILIHNHPSGNASPSKADI 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +    N L I +HDHIII ++ + SFK L++I
Sbjct: 228 SMTYRLKDAANALEITIHDHIIIARNNYTSFKELKLI 264


>gi|309783369|ref|ZP_07678079.1| DNA repair protein RadC-like protein [Ralstonia sp. 5_7_47FAA]
 gi|308917913|gb|EFP63600.1| DNA repair protein RadC-like protein [Ralstonia sp. 5_7_47FAA]
          Length = 164

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I      RGT+    VY RE+V+  L L+A ++I  HNHPSG P PS AD 
Sbjct: 68  IFLDAQNRVIEYIELFRGTLTQTSVYPREVVKTSLRLNAAAVIFAHNHPSGVPEPSRADE 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ +   L  +++ V DH+I+   A VSF    ++
Sbjct: 128 NLTKVLKDALALVDVRVLDHVIVAGGASVSFAQRGLL 164


>gi|325982099|ref|YP_004294501.1| DNA repair protein RadC [Nitrosomonas sp. AL212]
 gi|325531618|gb|ADZ26339.1| DNA repair protein RadC [Nitrosomonas sp. AL212]
          Length = 224

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N  IA E    GT+    VY REI++R L  +A ++I  HNHPSG   PS AD 
Sbjct: 128 IFLDAKNHAIATEELFSGTLTQASVYPREIIKRALYHNAAAVIFAHNHPSGIAEPSHADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ++   L+ +++ V DH I+G    +SF    +I
Sbjct: 188 VLTQSLKQALSLVDVQVLDHFIVGNGTALSFSEHDLI 224


>gi|171855257|sp|A3QIP9|Y3481_SHELP RecName: Full=UPF0758 protein Shew_3481
          Length = 225

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPREVVSLVLEKKAAAVIVCHNHPSGGAEPSHADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKYALATIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|226940826|ref|YP_002795900.1| RadC [Laribacter hongkongensis HLHK9]
 gi|254789654|sp|C1D8V1|Y1907_LARHH RecName: Full=UPF0758 protein LHK_01907
 gi|226715753|gb|ACO74891.1| RadC [Laribacter hongkongensis HLHK9]
          Length = 226

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+A E  + GT+    VY RE+V+  L   A ++IL HNHPSG+  PS AD 
Sbjct: 128 LCLDARNRLLAVEEVAHGTLTESRVYPREVVKAALRQHAVAVILAHNHPSGDSGPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH++I +    SF     +
Sbjct: 188 ELTEALGRALALVDVRLLDHLVISRQGCTSFAECGWL 224


>gi|94311291|ref|YP_584501.1| DNA repair protein RadC [Cupriavidus metallidurans CH34]
 gi|254241444|ref|ZP_04934766.1| hypothetical protein PA2G_02139 [Pseudomonas aeruginosa 2192]
 gi|24461569|gb|AAN62140.1|AF440523_47 putative DNA repair protein RadC [Pseudomonas aeruginosa]
 gi|93355143|gb|ABF09232.1| DNA binding protein, possibly associated to lesions [Cupriavidus
           metallidurans CH34]
 gi|126194822|gb|EAZ58885.1| hypothetical protein PA2G_02139 [Pseudomonas aeruginosa 2192]
          Length = 164

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR L+L+A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINATSVYPRVVVQRVLQLNAAAVVFAHQHPSGISEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHII+G+ A  SF    ++
Sbjct: 128 MLTQQLQAALALIDVRVLDHIIVGQGAPFSFAESGLL 164


>gi|91216072|ref|ZP_01253040.1| putative DNA repair protein [Psychroflexus torquis ATCC 700755]
 gi|91185589|gb|EAS71964.1| putative DNA repair protein [Psychroflexus torquis ATCC 700755]
          Length = 232

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I     S+G I    V  R + +  L   +T++ILVHNHPSG   PS AD 
Sbjct: 136 LMLNNSNKIIYKYPLSKGGITSTMVDTRLVYKSALAHGSTALILVHNHPSGTLQPSQADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +    + L+I + DHII+ +  + SF    I+
Sbjct: 196 TITQKLKNAGDLLDIKILDHIIVTEKTYFSFADEGIL 232


>gi|85707304|ref|ZP_01038388.1| DNA repair protein RadC [Roseovarius sp. 217]
 gi|85668185|gb|EAQ23062.1| DNA repair protein RadC [Roseovarius sp. 217]
          Length = 146

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/97 (49%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N +IADE+ S GT+DHVPVY RE+++R L L+A+++IL+HNHPSG+P PS+AD+
Sbjct: 50  LYLDRKNRIIADELLSTGTVDHVPVYPREVIKRALMLNASALILIHNHPSGDPTPSEADL 109

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ I      L + +HDHII+G    +S + L  +
Sbjct: 110 SMTKEIQKGCKYLGLTLHDHIIVGAGTELSLRALGKL 146


>gi|332171766|gb|AEE21020.1| DNA repair protein RadC [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 224

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI       GTID   VY R +V++ LE +A ++IL HNHPSG   PS AD 
Sbjct: 128 LLLDSQHQLIKFRKMFFGTIDSASVYPRVLVKQALEDNAAAVILTHNHPSGVAEPSQADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  II+ +  L+I V DH+++G    VSF    +I
Sbjct: 188 HITARIISAMGLLDIKVLDHLVVGDGVAVSFAERGLI 224


>gi|313899428|ref|ZP_07832938.1| DNA repair protein RadC [Clostridium sp. HGF2]
 gi|312955716|gb|EFR37374.1| DNA repair protein RadC [Clostridium sp. HGF2]
          Length = 229

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N LI+  V   GT+ +  V+ REI +  ++L    I+ VHNHPSG+P PS ADI
Sbjct: 128 LFLNQKNQLISSRVMFVGTLTNASVHPREIFREAMQLGCAKILCVHNHPSGDPQPSSADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T++I        I + DHII+ ++ + SF    ++
Sbjct: 188 SLTRSIEECGVMTAIPLMDHIIVSRNTYFSFAQKGLL 224


>gi|256544878|ref|ZP_05472249.1| DNA repair protein RadC [Anaerococcus vaginalis ATCC 51170]
 gi|256399377|gb|EEU12983.1| DNA repair protein RadC [Anaerococcus vaginalis ATCC 51170]
          Length = 226

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N++I+ E+ S G ++   V  RE     ++ SA S+I VHNHPSGNPNPS  D 
Sbjct: 130 ILLDTKNVIISKELISTGDLNSSIVNPRECFISAVKKSANSVIFVHNHPSGNPNPSCNDK 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++     L+I V DHIIIG + + SF+   II
Sbjct: 190 EITQRLVQAGEILDIKVLDHIIIGNNKYFSFRQENII 226


>gi|153811312|ref|ZP_01963980.1| hypothetical protein RUMOBE_01704 [Ruminococcus obeum ATCC 29174]
 gi|149832439|gb|EDM87523.1| hypothetical protein RUMOBE_01704 [Ruminococcus obeum ATCC 29174]
          Length = 236

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+ D + S+GT++   +  RE+    L   A ++IL+HNHP GNP PS  D 
Sbjct: 135 MMLDNQNHLLGDTMLSKGTVNATLITPREVYLEALRYHAVNLILIHNHPGGNPAPSKCDK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      L I + DHIIIG   ++SF+   ++
Sbjct: 195 EITERICQAGEMLGINLLDHIIIGDHRYISFREEGLM 231


>gi|317494142|ref|ZP_07952558.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917915|gb|EFV39258.1| DNA repair protein RadC [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 159

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI  E   +GTI H  V+ RE+V+  L+ +A ++I+ H HPS +  PS +D 
Sbjct: 63  LLLDNQHRLITHETLFKGTISHTEVHPREVVKTTLKYNAAAVIVAHCHPSCHAEPSQSDR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L+ + + + DH++IG    VSF     +
Sbjct: 123 RVTERLRNALDLVGVRLLDHLVIGGMDIVSFAERGWL 159


>gi|77917683|ref|YP_355498.1| DNA repair protein RadC [Pelobacter carbinolicus DSM 2380]
 gi|123575192|sp|Q3A8G4|Y065_PELCD RecName: Full=UPF0758 protein Pcar_0065
 gi|77543766|gb|ABA87328.1| DNA replication and repair protein RadC [Pelobacter carbinolicus
           DSM 2380]
          Length = 227

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+ +   S G++    V+ R++    +  SA +++ VHNHPSG+P+PS  D+
Sbjct: 131 LLLDSKNRLLREVGISEGSLTASIVHPRDVFAPVVRESAAAVLFVHNHPSGDPSPSREDL 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +      + + V DHIIIG + +VS     ++
Sbjct: 191 DITQRLREVGELMGVRVLDHIIIGDEGYVSLADRGVL 227


>gi|109896377|ref|YP_659632.1| DNA repair protein RadC [Pseudoalteromonas atlantica T6c]
 gi|123361460|sp|Q15ZW0|Y046_PSEA6 RecName: Full=UPF0758 protein Patl_0046
 gi|109698658|gb|ABG38578.1| DNA repair protein RadC [Pseudoalteromonas atlantica T6c]
          Length = 224

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI       GTID   VY R +V++ LE +A ++IL HNHPSG   PS AD 
Sbjct: 128 LLLDSQHQLIKFRKMFFGTIDSASVYPRVLVKQALEDNAAAVILTHNHPSGVAEPSQADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  II+ ++ L+I V DH+++G    VSF    +I
Sbjct: 188 HITARIISAMSLLDIKVLDHLVVGDGVAVSFAERGLI 224


>gi|145628112|ref|ZP_01783913.1| DNA repair protein RadC [Haemophilus influenzae 22.1-21]
 gi|144979887|gb|EDJ89546.1| DNA repair protein RadC [Haemophilus influenzae 22.1-21]
          Length = 99

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 55/97 (56%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          LFLD  + LI  E    GTI+   VY REI++  L  +A ++IL HNHPSG   PS +D 
Sbjct: 3  LFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQ 62

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ I  +   + I V DH+I+GK    SF    ++
Sbjct: 63 LITKKIQESAELMEIRVLDHLIVGKTDCYSFAENFLL 99


>gi|218888170|ref|YP_002437491.1| DNA repair protein RadC [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218759124|gb|ACL10023.1| DNA repair protein RadC [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 225

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/96 (43%), Positives = 58/96 (60%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD  N L+A E  SRGT++   VY REI++  L   A SIILVHNHP GNP+PS  DI 
Sbjct: 130 LLDTQNRLVAWERASRGTVNASVVYPREILELALRHKAASIILVHNHPGGNPSPSAGDIE 189

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ +  +   + + + DH+I+  DA  S K   +I
Sbjct: 190 ITRQLELSAKAIGMRLLDHVIVTDDACYSLKDDGLI 225


>gi|42665|emb|CAA44966.1| radC [Escherichia coli K-12]
 gi|42667|emb|CAA44967.1| radC [Escherichia coli K-12]
 gi|383570|prf||1903291A radC gene
 gi|444279|prf||1906333A radC gene
          Length = 99

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          +FLD  + +I       GT++HV V+ REI++  ++++A+++IL HNHPSG   PS AD 
Sbjct: 3  IFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADK 62

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ II +   +++ V DHI+IG+  +VSF     I
Sbjct: 63 LITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI 99


>gi|237736412|ref|ZP_04566893.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
 gi|229421454|gb|EEO36501.1| conserved hypothetical protein [Fusobacterium mortiferum ATCC 9817]
          Length = 154

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N LIA++    GTID   VY R +++  L  ++  +IL HNHPSGN  PS  DI
Sbjct: 58  LFLNNANKLIAEKTLFYGTIDKSAVYPRVVLEEVLRYNSAGVILAHNHPSGNLRPSKQDI 117

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +N++V DH+IIG D + SF+   +I
Sbjct: 118 QLTEALQELLEKINVMVLDHMIIGDDEYFSFREEGLI 154


>gi|289578046|ref|YP_003476673.1| DNA repair protein RadC [Thermoanaerobacter italicus Ab9]
 gi|297544317|ref|YP_003676619.1| DNA repair protein RadC [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|289527759|gb|ADD02111.1| DNA repair protein RadC [Thermoanaerobacter italicus Ab9]
 gi|296842092|gb|ADH60608.1| DNA repair protein RadC [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 226

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 58/96 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E S +SIILVHNHPSG+P PS  DI
Sbjct: 127 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSCSSIILVHNHPSGDPTPSREDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ ++   N L I V DH+IIG    +S K    
Sbjct: 187 EVTKRLVEGGNILGIKVLDHVIIGDGRGISLKEKGY 222


>gi|254522631|ref|ZP_05134686.1| DNA repair protein RadC [Stenotrophomonas sp. SKA14]
 gi|313107555|ref|ZP_07793740.1| hypothetical protein PA39016_001030004 [Pseudomonas aeruginosa
           39016]
 gi|219720222|gb|EED38747.1| DNA repair protein RadC [Stenotrophomonas sp. SKA14]
 gi|310880242|gb|EFQ38836.1| hypothetical protein PA39016_001030004 [Pseudomonas aeruginosa
           39016]
          Length = 164

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINSTSVYPRVVVQRVLELKAAAVVFAHQHPSGISEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHII+G+ A  SF    ++
Sbjct: 128 MLTQQLQAALALIDVRVLDHIIVGQGAPFSFAESGLL 164


>gi|16800652|ref|NP_470920.1| DNA repair protein RadC [Listeria innocua Clip11262]
 gi|25009035|sp|Q92BG5|Y1584_LISIN RecName: Full=UPF0758 protein lin1584
 gi|16414071|emb|CAC96815.1| lin1584 [Listeria innocua Clip11262]
 gi|313618770|gb|EFR90672.1| putative DNA repair protein [Listeria innocua FSL S4-378]
          Length = 224

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +I  +    G ++   V+ RE+ +  L  S+ SI+  HNHPSG+P PS  D+
Sbjct: 128 IFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSSASIMCFHNHPSGDPAPSSEDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +    N + I + DHIIIGK+ ++S K    
Sbjct: 188 LVTKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 223


>gi|83956247|ref|ZP_00964688.1| DNA repair protein [Sulfitobacter sp. NAS-14.1]
 gi|83839468|gb|EAP78649.1| DNA repair protein [Sulfitobacter sp. NAS-14.1]
          Length = 146

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/97 (50%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N +IADE+ S GT+DHVPVY RE+++R L L+A+++IL+HNHPSG+P PS+AD+
Sbjct: 50  LYLDRKNRIIADELLSTGTVDHVPVYPREVIKRALMLNASALILIHNHPSGDPTPSEADL 109

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ I      L + +HDHII+G    +S +GL  +
Sbjct: 110 SMTKEIQKGCKYLGLTLHDHIIVGAGTELSLRGLGKL 146


>gi|300703309|ref|YP_003744911.1| DNA repair protein RadC fork [Ralstonia solanacearum CFBP2957]
 gi|299070972|emb|CBJ42281.1| DNA repair protein radC homolog, associated with replication fork
           [Ralstonia solanacearum CFBP2957]
          Length = 224

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 60/95 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GT+    VY REI +R L  +A+++IL HNHP+G+  PS++D+
Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALYHNASAVILSHNHPTGHVEPSESDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +   L+ L++ V DH+I+G+    SF    
Sbjct: 188 ILTRELCRALSLLDVRVLDHMIVGRAEVYSFLEHG 222


>gi|254495321|ref|ZP_05108245.1| DNA repair protein RadC [Polaribacter sp. MED152]
 gi|85819675|gb|EAQ40832.1| DNA repair protein RadC [Polaribacter sp. MED152]
          Length = 228

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++A    S+G +    V IR + +R +EL++  +I+ HNHPSG   PS AD 
Sbjct: 132 LFLNNSNKVLAKTQISKGGLTATVVDIRLLFKRAIELASVGMIVCHNHPSGKLEPSQADK 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      L+I + DH+II +  + SF    I+
Sbjct: 192 QLTEKIKRAGTTLDIKLLDHLIITEKWYFSFADEGIL 228


>gi|126464466|ref|YP_001045579.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17029]
 gi|126106277|gb|ABN78807.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17029]
          Length = 138

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/97 (52%), Positives = 70/97 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N++IADE  S GT+ HVPVY RE+ +R LEL+A+++IL+HNHPSG+P PS  DI
Sbjct: 42  LFLDSKNVVIADEALSSGTVAHVPVYPREVAKRALELNASAVILIHNHPSGDPTPSTEDI 101

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I +    + + VHDHI+IG++A VSF+    +
Sbjct: 102 EMTFQIASACEAIEVRVHDHIVIGREAEVSFRASGFM 138


>gi|313884927|ref|ZP_07818679.1| DNA repair protein RadC [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619618|gb|EFR31055.1| DNA repair protein RadC [Eremococcus coleocola ACS-139-V-Col8]
          Length = 229

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 51/93 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    GT++    + REI +  ++     IIL HNHPSG+  PS ADI
Sbjct: 131 LFLNTKNEIIKKKTIFIGTVNSSVAHPREIFKEAVKYPTARIILGHNHPSGDVAPSTADI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
             T+ +I     + I + DH+IIG + ++S   
Sbjct: 191 QFTKRMIECGQLMGIEILDHLIIGHENYLSLHE 223


>gi|241662298|ref|YP_002980658.1| DNA repair protein RadC [Ralstonia pickettii 12D]
 gi|240864325|gb|ACS61986.1| DNA repair protein RadC [Ralstonia pickettii 12D]
          Length = 164

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  + ++A E   +GT+D   VY R +VQR L L+A+++IL H HPSG   PS AD 
Sbjct: 68  VFLNCQHQVLAYEPMFKGTVDQTSVYPRVLVQRALALNASAVILAHQHPSGMTVPSAADQ 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DH+I+GK    SF    ++
Sbjct: 128 VLTDRLKAALAMVDVRVVDHLIVGKGTPYSFAESGLL 164


>gi|291613221|ref|YP_003523378.1| DNA repair protein RadC [Sideroxydans lithotrophicus ES-1]
 gi|291583333|gb|ADE10991.1| DNA repair protein RadC [Sideroxydans lithotrophicus ES-1]
          Length = 224

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  + +I  E   +GT+    VY RE+V+R L  +A ++I  HNHPSG   PS +D 
Sbjct: 128 IFVDAQHRVICAEELFQGTLTQTSVYPREVVKRALHHNAAALIFAHNHPSGVAEPSQSDQ 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++  L  +++ V DH I+   A +SF    ++
Sbjct: 188 LLTDALMQALRLVDVRVLDHFIVAGAACLSFAEKGML 224


>gi|198282668|ref|YP_002218989.1| DNA repair protein RadC [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218667466|ref|YP_002424861.1| DNA repair protein RadC [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226736615|sp|B7J4A8|Y358_ACIF2 RecName: Full=UPF0758 protein AFE_0358
 gi|238689967|sp|B5EMA3|Y528_ACIF5 RecName: Full=UPF0758 protein Lferr_0528
 gi|198247189|gb|ACH82782.1| DNA repair protein RadC [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519679|gb|ACK80265.1| DNA repair protein RadC [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 224

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 59/95 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++  E    GTID   V+IRE+++R LEL+A ++I+ HNHPSG   PS AD+
Sbjct: 128 IFLDNRHRVLRFEEMFLGTIDGATVHIREVLKRALELNAAALIVAHNHPSGVAEPSAADL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           ++T+ +   +  L++ + DH I+G    +S +   
Sbjct: 188 SLTRRLDQAMQLLDLRLLDHFIVGDGEPLSLREQG 222


>gi|240850644|ref|YP_002972044.1| DNA repair protein RadC [Bartonella grahamii as4aup]
 gi|240267767|gb|ACS51355.1| DNA repair protein RadC [Bartonella grahamii as4aup]
          Length = 264

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/97 (60%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N L+ADEVQ  GTIDH PVY RE++ R LELSA+ +ILVHNHPSG+  PSDADI
Sbjct: 168 LFLDKKNGLLADEVQQTGTIDHTPVYPREVISRALELSASGLILVHNHPSGDSTPSDADI 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +    N L II+HDH+II ++   SFK L++I
Sbjct: 228 TMTYRLKDAANALGIIIHDHLIIARNNHTSFKALKLI 264


>gi|78189473|ref|YP_379811.1| DNA repair protein RadC [Chlorobium chlorochromatii CaD3]
 gi|123579488|sp|Q3AQF7|Y1513_CHLCH RecName: Full=UPF0758 protein Cag_1513
 gi|78171672|gb|ABB28768.1| DNA replication and repair protein RadC [Chlorobium chlorochromatii
           CaD3]
          Length = 222

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I +E+ S GT++   ++ REI +  +  SA SII+VHNHPSG+ NPS+AD 
Sbjct: 126 LHLNTKNQVIKNELISIGTLNTAVIHPREIFKSAIRESAHSIIVVHNHPSGDVNPSNADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      + I + DH+I+ K  + SF+   ++
Sbjct: 186 KITNELKQAGAFMQIEMLDHVIMSKTEWYSFRERGLL 222


>gi|163855388|ref|YP_001629686.1| DNA repair protein radC-like protein [Bordetella petrii DSM 12804]
 gi|163259116|emb|CAP41415.1| DNA repair protein radC homolog [Bordetella petrii]
          Length = 164

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL+A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINSTSVYPRVVVQRVLELNAAAVVFAHQHPSGISEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHII+G+ A  SF    ++
Sbjct: 128 MLTQQLQAALALIDVRVLDHIIVGQGAPFSFAESGLL 164


>gi|257463623|ref|ZP_05628014.1| DNA repair protein radC [Fusobacterium sp. D12]
 gi|317061175|ref|ZP_07925660.1| DNA repair protein radC [Fusobacterium sp. D12]
 gi|313686851|gb|EFS23686.1| DNA repair protein radC [Fusobacterium sp. D12]
          Length = 227

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N L+  E   RG+ID   VY REI+++ L+  A S+I  HNHPSG   PS  DI
Sbjct: 131 LFLNTANRLLCSEELFRGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGRTQPSRQDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L   ++++ +HII+ K ++ SF    ++
Sbjct: 191 ELTREMKEALKLFDVLLLEHIIVSKHSYFSFLEEGLL 227


>gi|50121779|ref|YP_050946.1| hypothetical protein ECA2855 [Pectobacterium atrosepticum SCRI1043]
 gi|49612305|emb|CAG75755.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 157

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  EV + G I+   V+ REI++  L  +A ++IL HNHPSG   PS AD 
Sbjct: 61  LYLDNQHRLIEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGCAEPSQADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +  +L+ L++ V DH+++G    +SF     +
Sbjct: 121 HITDKLKGSLSQLDVRVLDHLVVGGAEVMSFAERGWL 157


>gi|182679809|ref|YP_001833955.1| DNA repair protein RadC [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182635692|gb|ACB96466.1| DNA repair protein RadC [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 241

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/97 (58%), Positives = 70/97 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ  GT+DH PVY REI++R LEL A +IILVHNHPSG+P PS  D+
Sbjct: 145 LFLDRKNGLIADEVQGIGTVDHAPVYPREIIRRALELGACAIILVHNHPSGDPTPSKEDV 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I+     + I VHDH+IIGK    S K L++I
Sbjct: 205 QITQQIVALGKAMQISVHDHLIIGKQGHASLKSLQLI 241


>gi|319407236|emb|CBI80875.1| DNA repair protein RadC [Bartonella sp. 1-1C]
          Length = 264

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LI+DEVQ  GTIDH PVY RE++ R LELSA+ +IL+HNHPSGN +PS ADI
Sbjct: 168 LFLDKRNGLISDEVQQTGTIDHTPVYPREVISRALELSASGLILIHNHPSGNASPSKADI 227

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +    N L I +HDHIII ++ + SFK L++I
Sbjct: 228 SMTYRLKDAANALEITIHDHIIIARNNYTSFKELKLI 264


>gi|271501414|ref|YP_003334439.1| DNA repair protein RadC [Dickeya dadantii Ech586]
 gi|270344969|gb|ACZ77734.1| DNA repair protein RadC [Dickeya dadantii Ech586]
          Length = 159

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N  +  E+   GT++H  ++ REIV+  L  +A ++IL HNHPSG   PS++D 
Sbjct: 63  LYLDNQNRFLDKEILFLGTVNHTEIHPREIVKGALRHNAAAVILAHNHPSGYTAPSESDK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I  L  L I V DH IIG    +SF    ++
Sbjct: 123 AITRKVIQALALLEIRVLDHFIIGTHDVLSFAEHGLM 159


>gi|90962045|ref|YP_535961.1| DNA repair protein [Lactobacillus salivarius UCC118]
 gi|227891064|ref|ZP_04008869.1| DNA repair protein [Lactobacillus salivarius ATCC 11741]
 gi|301300891|ref|ZP_07207063.1| DNA repair protein RadC [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|90821239|gb|ABD99878.1| DNA repair protein [Lactobacillus salivarius UCC118]
 gi|227867153|gb|EEJ74574.1| DNA repair protein [Lactobacillus salivarius ATCC 11741]
 gi|300851490|gb|EFK79202.1| DNA repair protein RadC [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 225

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +++++V  +GT++   V+ REI +  L  S   I++ HNHPSGN  PS+ DI
Sbjct: 127 VCLDTKNQVLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSGNVEPSENDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     + I + DH+I+G + ++S    +I+
Sbjct: 187 QLTKRLINAGKMIGIELIDHVIVGSEVYLSLAEEKIV 223


>gi|291533850|emb|CBL06963.1| DNA replication and repair protein RadC [Megamonas hypermegale
           ART12/1]
          Length = 229

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +IA    S G+++   V+ RE+ +  +   A+S+ILVHNHPSG+P+PS  DI
Sbjct: 132 LLLDTKNQIIAFPDISIGSLNASIVHPREVFRCAINHFASSMILVHNHPSGDPSPSMEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +I     L+I + DHII+G + F S K   +I
Sbjct: 192 HITKKLIAGSKILDIEILDHIIVGDNKFTSLKQQGMI 228


>gi|170728880|ref|YP_001762906.1| DNA repair protein RadC [Shewanella woodyi ATCC 51908]
 gi|238688685|sp|B1KL05|Y4561_SHEWM RecName: Full=UPF0758 protein Swoo_4561
 gi|169814227|gb|ACA88811.1| DNA repair protein RadC [Shewanella woodyi ATCC 51908]
          Length = 225

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY R++V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPRDVVSLVLEKKAAAVIVCHNHPSGVAEPSHADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L+ +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKCALSTIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|330957298|gb|EGH57558.1| hypothetical protein PMA4326_01827 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 224

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDSKHRAMTFEILFRGTINAAYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ V DH+IIG    +S     ++
Sbjct: 188 DLTKRLKEALLLVDVQVLDHVIIGDGEPLSMVEKGLM 224


>gi|218891377|ref|YP_002440244.1| RadC family DNA repair protein [Pseudomonas aeruginosa LESB58]
 gi|218771603|emb|CAW27376.1| RadC family DNA repair protein [Pseudomonas aeruginosa LESB58]
          Length = 164

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  + ++A E   RGTI    V+ R IVQR LEL+A ++I  H HPSG   PS AD 
Sbjct: 68  VFLNSMHEVLAYEPMFRGTIHSTSVHARPIVQRALELNAAAVIFSHQHPSGCTEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L+ +++ V DH+I+G+    SF    ++
Sbjct: 128 ALTQTLRAALSLIDVRVLDHLIVGQGTPYSFAESGLL 164


>gi|330808765|ref|YP_004353227.1| putative DNA repair protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376873|gb|AEA68223.1| putative DNA repair protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 163

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A E    GTID V VY R I+QR LE    +II+ HNHPSG+  PS  DI
Sbjct: 67  LFLDARHRVVAYEPLFYGTIDVVNVYPRRILQRALEHQCAAIIVAHNHPSGDTIPSPGDI 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  LN+ + DH IIG+    SF    +I
Sbjct: 127 QITKTLSDVLPKLNVRLLDHFIIGEGEPYSFAESGLI 163


>gi|315576278|gb|EFU88469.1| DNA repair protein RadC [Enterococcus faecalis TX0309B]
          Length = 240

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP PS  DI
Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSDRILLAHNHPSGNPTPSPQDI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T+ +      + I + DHII+G   ++S +    
Sbjct: 201 QFTKRMEECGEMMGIQLLDHIILGDSGYISLREENF 236


>gi|300214742|gb|ADJ79158.1| DNA repair protein [Lactobacillus salivarius CECT 5713]
          Length = 225

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +++++V  +GT++   V+ REI +  L  S   I++ HNHPSGN  PS+ DI
Sbjct: 127 VCLDTKNQVLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPSGNVEPSENDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     + I + DH+I+G + ++S    +I+
Sbjct: 187 QLTKRLINAGKMIGIELIDHVIVGSEVYLSLAEEKIV 223


>gi|294508375|ref|YP_003572433.1| DNA repair protein RadC [Salinibacter ruber M8]
 gi|294344703|emb|CBH25481.1| DNA repair protein RadC [Salinibacter ruber M8]
          Length = 258

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N++I D   S G +    V  R + ++ +   A ++I +HNHPSGNP PS  DI
Sbjct: 161 VHLNTANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGNPEPSREDI 220

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I VHDH+II      S     +I
Sbjct: 221 RITRQLAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 257


>gi|289524079|ref|ZP_06440933.1| DNA repair protein RadC [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502735|gb|EFD23899.1| DNA repair protein RadC [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 309

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N  I +   SRG+++   V  +EIV+     SA+S+ILVHNHPSG   PS  D+
Sbjct: 209 ILLDIKNKPIGNVEISRGSVNTTVVDPKEIVKVASLKSASSVILVHNHPSGETTPSSEDV 268

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK--DAFVSFKGLRII 97
            +T  I    + + + V DHII+GK    + SF    +I
Sbjct: 269 ELTSRITYACDLVGVNVLDHIIVGKNPGDYYSFAREGLI 307


>gi|217978231|ref|YP_002362378.1| DNA repair protein RadC [Methylocella silvestris BL2]
 gi|217503607|gb|ACK51016.1| DNA repair protein RadC [Methylocella silvestris BL2]
          Length = 238

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/97 (61%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY REI++R LELSA ++ILVHNHPSG+P PS  DI
Sbjct: 142 LFLDKKNFLIADEVQGVGTVDHAPVYPREIMRRALELSACALILVHNHPSGDPEPSTEDI 201

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  II    PL I VHDH++IGK    S K +R+I
Sbjct: 202 YLTHQIIAVGKPLKITVHDHLVIGKHGHASLKEMRLI 238


>gi|157373526|ref|YP_001472126.1| DNA repair protein RadC [Shewanella sediminis HAW-EB3]
 gi|189029405|sp|A8FQ75|Y385_SHESH RecName: Full=UPF0758 protein Ssed_0385
 gi|157315900|gb|ABV34998.1| DNA repair protein RadC [Shewanella sediminis HAW-EB3]
          Length = 225

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY R++V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPRDVVCLVLEKKAAAVIVCHNHPSGVAEPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKFALETIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|114330110|ref|YP_746332.1| DNA repair protein RadC [Nitrosomonas eutropha C91]
 gi|114307124|gb|ABI58367.1| DNA repair protein RadC [Nitrosomonas eutropha C91]
          Length = 167

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  + ++A E   +GT+    VY R +VQR LEL+A+++I  H HPSG   PS AD 
Sbjct: 70  VFLNSQHQVLACECLFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADR 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L+ ++I V DH IIGK    SF    ++
Sbjct: 130 AITNRLKFILSMIDIRVVDHFIIGKGEPYSFAESGLL 166


>gi|163857461|ref|YP_001631759.1| DNA repair protein RadC [Bordetella petrii DSM 12804]
 gi|229485545|sp|A9IU27|Y3149_BORPD RecName: Full=UPF0758 protein Bpet3149
 gi|163261189|emb|CAP43491.1| DNA repair protein radC homolog [Bordetella petrii]
          Length = 225

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LI     +RGT+    VY RE+V+  L   A ++IL HNHPSG+  PS AD 
Sbjct: 129 LYLDSQLNLITSGELARGTLARASVYPREVVREALRHHAAALILAHNHPSGSAQPSQADR 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + T+++   L  + I + DH+I+  D  VS   L ++
Sbjct: 189 DFTRHMQQALALVEIRLLDHLIVAGDTVVSMAELGLL 225


>gi|299535631|ref|ZP_07048952.1| DNA repair protein radC-like protein [Lysinibacillus fusiformis
           ZC1]
 gi|298728831|gb|EFI69385.1| DNA repair protein radC-like protein [Lysinibacillus fusiformis
           ZC1]
          Length = 224

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G+++   V+ REI +  ++ SA SII  HNHPSG P PS  DI
Sbjct: 128 LFLNIKNQIIHKQTIFIGSLNASIVHPREIFREAVKRSAASIICAHNHPSGVPTPSSEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ I+     + I + DH+IIG   ++S K    
Sbjct: 188 EVTKRIVEAGYIIGIELIDHVIIGDHQYISLKEKGY 223


>gi|257469304|ref|ZP_05633398.1| DNA repair protein radC [Fusobacterium ulcerans ATCC 49185]
 gi|317063551|ref|ZP_07928036.1| DNA repair protein radC [Fusobacterium ulcerans ATCC 49185]
 gi|313689227|gb|EFS26062.1| DNA repair protein radC [Fusobacterium ulcerans ATCC 49185]
          Length = 229

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N LIA E    GTID   VY REIV+R +   A S++  HNHPSGN +PS  DI
Sbjct: 131 LFLNSANNLIASETLFYGTIDKSAVYPREIVERTIRNGAKSVVFAHNHPSGNISPSKQDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ++  +L  L+I + DHIII K+++ SF    +I
Sbjct: 191 ELTQHMYDSLKTLDIRLIDHIIITKNSYFSFLEEGLI 227


>gi|160880508|ref|YP_001559476.1| DNA repair protein RadC [Clostridium phytofermentans ISDg]
 gi|160429174|gb|ABX42737.1| DNA repair protein RadC [Clostridium phytofermentans ISDg]
          Length = 232

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  D  + L+ +E+ S GT++   +  RE+    ++  A  IIL+HNHPSG+P PS  DI
Sbjct: 135 LMFDTKSKLLREEIISIGTVNASIMSPREVFLLAVKYEAVYIILLHNHPSGDPTPSKEDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L + + DHIIIG + ++S K   II
Sbjct: 195 AVTKRMKEAGELLGVTLMDHIIIGDNRYISLKEQGII 231


>gi|329851338|ref|ZP_08266095.1| DNA repair protein RadC family protein [Asticcacaulis biprosthecum
           C19]
 gi|328840184|gb|EGF89756.1| DNA repair protein RadC family protein [Asticcacaulis biprosthecum
           C19]
          Length = 243

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/97 (54%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK   LIADE+   GT+DH P Y REI++R LELSA+S+ILVHNHPSG+P+ S  DI
Sbjct: 147 LFLDKKYQLIADEIMGYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPSASPGDI 206

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ I+    PL I VHDH+I+G++  +S    R++
Sbjct: 207 DMTRQIVKAGEPLRIKVHDHLIVGREGVLSMSQQRLM 243


>gi|163868311|ref|YP_001609520.1| DNA repair protein RadC [Bartonella tribocorum CIP 105476]
 gi|161017967|emb|CAK01525.1| DNA repair protein RadC [Bartonella tribocorum CIP 105476]
          Length = 270

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/97 (59%), Positives = 70/97 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N L+ADEVQ  GTIDH PVY RE++ R LELSA+ +ILVHNHPSG+  PSDADI
Sbjct: 174 LFLDKKNGLLADEVQQTGTIDHTPVYPREVISRALELSASGLILVHNHPSGDSTPSDADI 233

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +    N L I +HDH+II +    SFK L++I
Sbjct: 234 TMTYRLKDAANALGITIHDHLIIARHNHTSFKALKLI 270


>gi|296157078|ref|ZP_06839914.1| DNA repair protein RadC [Burkholderia sp. Ch1-1]
 gi|295892414|gb|EFG72196.1| DNA repair protein RadC [Burkholderia sp. Ch1-1]
          Length = 164

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  + +IA E    GTID   VY R +VQR L  +A ++IL H HPSG   PS AD 
Sbjct: 68  IFMDSQHQVIAYEPLFHGTIDAAVVYPRVLVQRALAHNAAALILAHQHPSGVAKPSAADK 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++I   L  +++ V DHII+GK    SF    ++
Sbjct: 128 AITRDIKAALAMVDVRVLDHIIVGKGTPYSFSEAGLL 164


>gi|213161115|ref|ZP_03346825.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213428441|ref|ZP_03361191.1| DNA repair protein RadC [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
          Length = 159

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  +    GT++ V V+ RE+V+  L+ +A +++L HNHPSG   PS AD 
Sbjct: 63  LWLDNQHRLIVHDTLFLGTVNAVTVHPREVVKSGLKNNAAAVVLAHNHPSGEAEPSKADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH+IIG     SF     +
Sbjct: 123 LITERLQQALELVDIRLLDHLIIGGMDIASFAERGWL 159


>gi|310778318|ref|YP_003966651.1| DNA repair protein RadC [Ilyobacter polytropus DSM 2926]
 gi|309747641|gb|ADO82303.1| DNA repair protein RadC [Ilyobacter polytropus DSM 2926]
          Length = 225

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N L+ +E   +GTID   VY R IV++ L+  A S+I  HNHPSGN NPS ADI
Sbjct: 129 IFLDTANNLLCEETLFKGTIDRSGVYPRNIVEKVLKHGAKSVIFAHNHPSGNLNPSKADI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + T  I   LN + I V DH+II +D++ SF    +I
Sbjct: 189 DFTDKITKVLNAIEIRVLDHMIITRDSYFSFLEKGLI 225


>gi|145301518|ref|YP_001144357.1| DNA repair protein [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142856400|gb|ABO92609.1| DNA repair protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 296

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + +I     S GTID   VY RE+V+  L+ +A ++IL HNHPSG   PS AD 
Sbjct: 67  ILLDNQHRVINAVDLSHGTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +   L+ ++I V DHI++  +  +SF     
Sbjct: 127 QITERLQAALDLVDIRVLDHIVVAGENSMSFAVRGF 162


>gi|238855285|ref|ZP_04645604.1| DNA repair protein RadC [Lactobacillus jensenii 269-3]
 gi|260664643|ref|ZP_05865495.1| DNA repair protein RadC [Lactobacillus jensenii SJ-7A-US]
 gi|282932422|ref|ZP_06337847.1| RadC-like protein [Lactobacillus jensenii 208-1]
 gi|313471902|ref|ZP_07812394.1| DNA repair protein RadC [Lactobacillus jensenii 1153]
 gi|238832177|gb|EEQ24495.1| DNA repair protein RadC [Lactobacillus jensenii 269-3]
 gi|239529177|gb|EEQ68178.1| DNA repair protein RadC [Lactobacillus jensenii 1153]
 gi|260561708|gb|EEX27680.1| DNA repair protein RadC [Lactobacillus jensenii SJ-7A-US]
 gi|281303371|gb|EFA95548.1| RadC-like protein [Lactobacillus jensenii 208-1]
          Length = 207

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N ++ + +  +GT++   V+ R+I +  +  ++  I++ HNHPSG+ +PS  DI
Sbjct: 111 IYLDNKNKVLGERLLFQGTVNRSVVHPRDIFRWAVFYNSVGILIAHNHPSGDTSPSQKDI 170

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ I    + + I   DHII+   +++SFK  ++I
Sbjct: 171 EFTKQIDKASDLMGINFLDHIIVADRSYLSFKEEQLI 207


>gi|149912934|ref|ZP_01901468.1| DNA repair protein RadC [Roseobacter sp. AzwK-3b]
 gi|149813340|gb|EDM73166.1| DNA repair protein RadC [Roseobacter sp. AzwK-3b]
          Length = 254

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/96 (55%), Positives = 73/96 (76%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD+ NILIADE Q+ GT+DHVPVY RE+V+R L L+A+++ILVHNHPSG+P PS++DI+
Sbjct: 159 YLDRKNILIADEAQANGTVDHVPVYPREVVKRALHLNASALILVHNHPSGDPTPSESDIH 218

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           MT  I T    L + +HDH+IIGK   +SF+    +
Sbjct: 219 MTHQIQTAAQALGLTLHDHLIIGKSCEISFRAQGYL 254


>gi|104784328|ref|YP_610826.1| DNA repair protein RadC [Pseudomonas entomophila L48]
 gi|122401255|sp|Q1I2U3|Y5431_PSEE4 RecName: Full=UPF0758 protein PSEEN5431
 gi|95113315|emb|CAK18043.1| DNA repair protein radC [Pseudomonas entomophila L48]
          Length = 226

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   +Y RE+V+R L  +A ++IL HNHPSGN  PS  D+
Sbjct: 128 LFLDTKHRPLAFEILFRGTIDRASIYPREVVRRALLHNAAALILCHNHPSGNCEPSQDDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +  +L  +++ V DH+I+G    +S      +
Sbjct: 188 HLTLMLKRSLALIDVRVVDHVIVGDGEPLSMIEHGWL 224


>gi|323136973|ref|ZP_08072053.1| DNA repair protein RadC [Methylocystis sp. ATCC 49242]
 gi|322397734|gb|EFY00256.1| DNA repair protein RadC [Methylocystis sp. ATCC 49242]
          Length = 244

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/97 (61%), Positives = 75/97 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GTIDH PVY RE+V+R LEL A+++IL HNHPSG+P PS ADI
Sbjct: 148 LFLDKRNALIADEVQGVGTIDHTPVYPREVVRRALELGASALILAHNHPSGDPTPSAADI 207

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT++II    P  I VHDH+I+G++   SF+GL++I
Sbjct: 208 RMTKDIIAIAQPFGIAVHDHLIVGRNGQASFRGLKLI 244


>gi|223984388|ref|ZP_03634527.1| hypothetical protein HOLDEFILI_01821 [Holdemania filiformis DSM
           12042]
 gi|223963630|gb|EEF68003.1| hypothetical protein HOLDEFILI_01821 [Holdemania filiformis DSM
           12042]
          Length = 228

 Score =  124 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N ++   +  +GT+D   V+ RE+ +  L  SA  +++VHNHPS +  PS AD 
Sbjct: 131 IYLDAKNHILEHRLLFKGTLDASIVHPREVFKEALLASACRVLVVHNHPSQDLTPSLADR 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +  T   + I + DH+I+G   + SF+   ++
Sbjct: 191 IITQRLKETGELIGIELLDHLIVGTTQYFSFRAHGLL 227


>gi|198275573|ref|ZP_03208104.1| hypothetical protein BACPLE_01738 [Bacteroides plebeius DSM 17135]
 gi|198271202|gb|EDY95472.1| hypothetical protein BACPLE_01738 [Bacteroides plebeius DSM 17135]
          Length = 158

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N ++   + S G +      +R I Q  L  ++ ++IL HNHPSGN  PS  DI
Sbjct: 62  LFLNQANQVLGYTLISEGGLTETTADVRLIFQAALLTNSVALILAHNHPSGNLKPSPEDI 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I V DHII+    + SF    ++
Sbjct: 122 RLTKQVRDAAQLMRIKVLDHIILTDAEYYSFADEGML 158


>gi|170293827|gb|ACB12963.1| RadC [Aquabacterium sp. PL1F5]
          Length = 198

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD   +LI  E   RGT+    VY RE+V+  L  +A +++L HNHPSG  +PS AD 
Sbjct: 102 LYLDAQQVLIEAEELFRGTLTQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADE 161

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + ++L  +++ V DH I+G D  +SF    ++
Sbjct: 162 LLTQTLKSSLMMVDVRVLDHFIVGGDRVLSFAEQGLL 198


>gi|221064731|ref|ZP_03540836.1| DNA repair protein RadC [Comamonas testosteroni KF-1]
 gi|319764685|ref|YP_004128622.1| DNA repair protein radc [Alicycliphilus denitrificans BC]
 gi|220709754|gb|EED65122.1| DNA repair protein RadC [Comamonas testosteroni KF-1]
 gi|317119246|gb|ADV01735.1| DNA repair protein RadC [Alicycliphilus denitrificans BC]
          Length = 164

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL+A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSLHQVLAYEPLFRGTINATSVYPRVVVQRVLELNAAAVVFAHQHPSGVSEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHII+G+ A  SF    ++
Sbjct: 128 MLTQQLQAALALIDVRVLDHIIVGQGAPFSFAESGLL 164


>gi|91784617|ref|YP_559823.1| DNA repair protein RadC [Burkholderia xenovorans LB400]
 gi|40019185|emb|CAE92909.1| putative DNA repair protein [Pseudomonas putida]
 gi|91688571|gb|ABE31771.1| DNA repair protein RadC [Burkholderia xenovorans LB400]
          Length = 164

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL A +++  H HPSG+  PS+AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINSTAVYPRVVVQRVLELKAAAVVFAHQHPSGSTEPSNADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ + DHI++G     SF    ++
Sbjct: 128 ALTQRLQAALALIDVRLLDHIVVGLGNPYSFAEHGLL 164


>gi|254441970|ref|ZP_05055456.1| DNA repair protein RadC [Octadecabacter antarcticus 307]
 gi|198250592|gb|EDY74914.1| DNA repair protein RadC [Octadecabacter antarcticus 307]
          Length = 189

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+LIADE Q  GT+DHVPVY RE+V+R LEL+A+S+ILVHNHPSG+P PS+ DI
Sbjct: 93  LFLDRKNVLIADEAQGNGTVDHVPVYPREVVKRALELNASSLILVHNHPSGDPTPSNEDI 152

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      LNI +HDH+IIG+   +SFK   +I
Sbjct: 153 AMTMQIHDAAKALNISLHDHLIIGRSRELSFKSQGLI 189


>gi|121593658|ref|YP_985554.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|121593791|ref|YP_985687.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|120605738|gb|ABM41478.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|120605871|gb|ABM41611.1| DNA repair protein RadC [Acidovorax sp. JS42]
          Length = 164

 Score =  124 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL+A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINSTSVYPRVVVQRVLELNAAAVVFAHQHPSGITEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHIIIG+ A  SF    ++
Sbjct: 128 MLTQQLQAALALIDVRVLDHIIIGQGAPFSFAESGLL 164


>gi|241764305|ref|ZP_04762334.1| DNA repair protein RadC [Acidovorax delafieldii 2AN]
 gi|241366319|gb|EER60856.1| DNA repair protein RadC [Acidovorax delafieldii 2AN]
          Length = 164

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINSTAVYPRVVVQRVLELKAAAVVFAHQHPSGITEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHII+G     SF    ++
Sbjct: 128 ALTQQLQAALALIDVRVLDHIIVGLGNPYSFAEHGLL 164


>gi|207721439|ref|YP_002251880.1| DNA repair protein RadC [Ralstonia solanacearum MolK2]
 gi|207742580|ref|YP_002258972.1| dna repair protein radc homolog [Ralstonia solanacearum IPO1609]
 gi|206586599|emb|CAQ17186.1| dna repair protein radc homolog [Ralstonia solanacearum MolK2]
 gi|206593974|emb|CAQ60901.1| dna repair protein radc homolog [Ralstonia solanacearum IPO1609]
          Length = 224

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 60/95 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   +GT+    VY REI +R L  +A+++IL HNHP+G+  PS++D+
Sbjct: 128 LFLDVRHRLIAWEELFQGTLTEARVYPREIAKRALYHNASALILSHNHPTGHVEPSESDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +   L+ L++ V DH+I+G+    SF    
Sbjct: 188 ILTRELCRALSLLDVRVLDHMIVGRAEVYSFLEHG 222


>gi|330827407|ref|YP_004390645.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
 gi|329312715|gb|AEB87129.1| DNA repair protein RadC [Alicycliphilus denitrificans K601]
          Length = 164

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I      RGT+    VY RE+V+  L L+A ++I  HNHPSG P PS AD 
Sbjct: 68  IFLDAQNRVIEYIELFRGTLTQTSVYPREVVKTSLRLNAAAVIFAHNHPSGVPEPSRADE 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ +   L  +++ V DH+++   A VSF    ++
Sbjct: 128 NLTKVLKDALALVDVRVLDHVVVAGGASVSFAQRGLL 164


>gi|301644226|ref|ZP_07244233.1| DNA repair protein RadC family protein [Escherichia coli MS 146-1]
 gi|301077423|gb|EFK92229.1| DNA repair protein RadC family protein [Escherichia coli MS 146-1]
          Length = 161

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    G++ HV V+ RE+V+  L  +A +++L HNHPSG+P PS  D 
Sbjct: 65  LYLDNQHRLLESETLFAGSVYHVQVHPREVVKSALRFNAAAVVLAHNHPSGDPEPSKVDR 124

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +   L  +++   DH+++G+D  VSF     I
Sbjct: 125 QMTDKLKEVLGLVDVKTLDHLVVGQDGIVSFAERGWI 161


>gi|110598384|ref|ZP_01386657.1| DNA repair protein RadC [Chlorobium ferrooxidans DSM 13031]
 gi|110339993|gb|EAT58495.1| DNA repair protein RadC [Chlorobium ferrooxidans DSM 13031]
          Length = 223

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I  E+ S GT++   ++ RE+ +  +  SA +II+VHNHPSG+  PS+AD 
Sbjct: 126 LHLNTKNQIIKSELVSVGTLNASLIHPREVFKAAIRESAHAIIVVHNHPSGDVEPSNADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      + I + DHIIIG   + SF+   ++
Sbjct: 186 QVTALLKEASALIQIDLLDHIIIGNTGWFSFRENSLL 222


>gi|320160805|ref|YP_004174029.1| DNA repair protein RadC [Anaerolinea thermophila UNI-1]
 gi|319994658|dbj|BAJ63429.1| DNA repair protein RadC [Anaerolinea thermophila UNI-1]
          Length = 235

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 60/96 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N ++  E    G+++   V + EI +  ++ SA S+ILVHNHPSG+P+PS  DI
Sbjct: 137 ILLDTRNRVLKIENLYIGSLNASTVRVAEIFRPAIQASAASLILVHNHPSGDPSPSPEDI 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +I     L+I V DH+IIG++ +VS K   +
Sbjct: 197 TLTRTVIQAGKMLDIGVLDHLIIGQNRWVSLKERGL 232


>gi|315500042|ref|YP_004088845.1| DNA repair protein radc [Asticcacaulis excentricus CB 48]
 gi|315418054|gb|ADU14694.1| DNA repair protein RadC [Asticcacaulis excentricus CB 48]
          Length = 244

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADE+ + GT+DH P Y REI++R LELSA+S+ILVHNHPSG+P PS  DI
Sbjct: 148 LFLDKKNQLIADEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDI 207

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+  I    PL I +HDH+I+G++  +S K +  I
Sbjct: 208 DMTKANIAAGKPLKIAIHDHLIVGREGVLSMKQVGAI 244


>gi|332040187|gb|EGI76568.1| hypothetical protein HGR_10625 [Hylemonella gracilis ATCC 19624]
          Length = 223

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + L+A E   RGT+    VY RE+V R L   A +++L HNHPSG+ +PS AD 
Sbjct: 127 LMLDSQHRLLALEELFRGTLAQTSVYPREVVLRALHHHAAAVVLAHNHPSGSVSPSRADE 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++ + L  +++ V DH+I+     +S     ++
Sbjct: 187 LLTRSLQSALALVDVRVLDHVIVAPGQALSMAERGLL 223


>gi|294142830|ref|YP_003558808.1| DNA repair protein RadC [Shewanella violacea DSS12]
 gi|293329299|dbj|BAJ04030.1| DNA repair protein RadC [Shewanella violacea DSS12]
          Length = 225

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY R++V   LE  A+++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPRDVVCLVLEKKASAVIVCHNHPSGVAEPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKCALATIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|239909102|ref|YP_002955844.1| DNA repair protein RadC [Desulfovibrio magneticus RS-1]
 gi|239798969|dbj|BAH77958.1| DNA repair protein RadC [Desulfovibrio magneticus RS-1]
          Length = 228

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 56/94 (59%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D  N L+  E  S+GT+D   VY RE++   L  +A+ +ILVHNHP  +P PS  D+  T
Sbjct: 135 DTKNRLVGWERVSKGTVDQAAVYPREVIAMALRYNASGVILVHNHPGADPKPSAEDMAFT 194

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + I+     ++I V DH+++ ++ F SF+   +I
Sbjct: 195 RRIVAAAREMDIRVLDHLVVTENRFFSFQAEGMI 228


>gi|163750748|ref|ZP_02157984.1| DNA repair protein RadC [Shewanella benthica KT99]
 gi|161329592|gb|EDQ00584.1| DNA repair protein RadC [Shewanella benthica KT99]
          Length = 225

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY R++V   LE  A ++I+ HNHPSG   PS AD 
Sbjct: 128 LLLDSQHRVIQFVELFRGTIDSASVYPRDVVCLVLEKKAAAVIVCHNHPSGVAEPSLADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G    VSF     I
Sbjct: 188 RITERLKCALATIDVSLLDHMVVGDREIVSFAERGWI 224


>gi|166031835|ref|ZP_02234664.1| hypothetical protein DORFOR_01536 [Dorea formicigenerans ATCC
           27755]
 gi|166028288|gb|EDR47045.1| hypothetical protein DORFOR_01536 [Dorea formicigenerans ATCC
           27755]
          Length = 230

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI +   S+GT++   +  RE+    L+ +A  +I++HNHPSG P PS  D 
Sbjct: 134 LMLNSKSKLIGETNISKGTVNASLITPRELFIEALQKNAVFVIILHNHPSGEPTPSREDR 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I + DHIIIG + +VSF+   ++
Sbjct: 194 LITRRIQDAGALIGIELLDHIIIGNNCYVSFREEGML 230


>gi|237809187|ref|YP_002893627.1| DNA repair protein RadC [Tolumonas auensis DSM 9187]
 gi|237501448|gb|ACQ94041.1| DNA repair protein RadC [Tolumonas auensis DSM 9187]
          Length = 168

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A E   RGTI+   VY R +VQR L  +A ++I  H HPSGN  PS AD 
Sbjct: 72  LFLDTRHQVLAYEPLFRGTINQTSVYPRVVVQRALAANAAAVIFAHQHPSGNSEPSAADR 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L+ ++I V DH IIG+    SF    ++
Sbjct: 132 MITRRLRDALDLIDIRVLDHFIIGQGEPYSFAESGLL 168


>gi|189347307|ref|YP_001943836.1| DNA repair protein RadC [Chlorobium limicola DSM 245]
 gi|189341454|gb|ACD90857.1| DNA repair protein RadC [Chlorobium limicola DSM 245]
          Length = 222

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I  ++ S GT++   ++ RE+ +  +  SA +IILVHNHPSG+  PS+AD 
Sbjct: 126 LHLNTKNRVIRHDIVSVGTLNASLIHPREVFKSAIRESAHAIILVHNHPSGDVEPSNADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I + DH+I+GK+ + SF+   ++
Sbjct: 186 QVTEILKKAGAILQIELLDHVIVGKENWFSFREHSLL 222


>gi|87199332|ref|YP_496589.1| DNA repair protein RadC [Novosphingobium aromaticivorans DSM 12444]
 gi|87135013|gb|ABD25755.1| DNA repair protein RadC [Novosphingobium aromaticivorans DSM 12444]
          Length = 245

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 67/97 (69%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N+LI D + S GT+D  P+Y RE++++ +++ A ++ILVHNHPSG+P PS ADI
Sbjct: 149 LYLNSQNMLILDHLVSEGTLDESPIYTREVIRKAMDVGAAAMILVHNHPSGSPKPSRADI 208

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++     + + VHDHI+IG++   S K   +I
Sbjct: 209 QVTQKVMEAARLMGMTVHDHIVIGREGHTSLKAQGLI 245


>gi|86132165|ref|ZP_01050761.1| DNA repair protein RadC [Dokdonia donghaensis MED134]
 gi|85817499|gb|EAQ38679.1| DNA repair protein RadC [Dokdonia donghaensis MED134]
          Length = 237

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++  E  S+G +    V +R +++  +ELSA  +IL HNHPSG   PS AD 
Sbjct: 141 LFLNNSNKVLRKEQVSKGGLTGTLVDVRMVMKTAIELSAVGMILGHNHPSGTLKPSQADK 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  + T    L+I V DHII+ +  + SF    I+
Sbjct: 201 MLTTKLKTAAQSLDIQVLDHIIVTEKQYFSFADDGIL 237


>gi|120599009|ref|YP_963583.1| DNA repair protein RadC [Shewanella sp. W3-18-1]
 gi|120559102|gb|ABM25029.1| DNA repair protein RadC [Shewanella sp. W3-18-1]
          Length = 160

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LIA E    GTID   VY RE+V+  L  +A + I  HNHPSG P PS AD 
Sbjct: 64  LLLDSQHRLIAYEELFFGTIDAASVYPREVVKLVLHRNAAAAIFAHNHPSGIPEPSQADK 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + + L  +++   DH +IG    VSF     I
Sbjct: 124 RITERLKSALATIDVAALDHFVIGHHEVVSFAERGWI 160


>gi|325290578|ref|YP_004266759.1| DNA replication and repair protein RadC [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965979|gb|ADY56758.1| DNA replication and repair protein RadC [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 230

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+   +L+     S G+++   V+ RE  +  ++ ++ S+IL+HNHPSG+P+PS  D+
Sbjct: 134 MHLNTKKMLLGISEISIGSLNSSLVHPRECFKEAIKRNSHSLILLHNHPSGDPSPSQEDL 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I V DHIIIG   +VS K   +I
Sbjct: 194 EITRRLDECGRILGISVLDHIIIGDGRYVSLKEQGMI 230


>gi|325840362|ref|ZP_08167009.1| putative DNA repair protein RadC [Turicibacter sp. HGF1]
 gi|325490347|gb|EGC92674.1| putative DNA repair protein RadC [Turicibacter sp. HGF1]
          Length = 149

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 48/96 (50%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L+  N      V S GT++   V+ RE+ +  +  +A SI+  HNHPSG+  PS  DI 
Sbjct: 54  CLNTKNEPTNISVVSVGTLNKTIVHPREVFKTAILSNACSIVAFHNHPSGDTKPSQQDIQ 113

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T  +      L I + DH+IIG   F S K    +
Sbjct: 114 LTNRLYEAGELLGIKLLDHLIIGDGTFTSLKEKGYL 149


>gi|255292379|dbj|BAH89498.1| DNA repair protein RadC [uncultured bacterium]
          Length = 146

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/97 (49%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N +IADE+ S GT+DHVPVY RE+++R L L+A+++IL+HNHPSG+P PS+AD+
Sbjct: 50  LYLDRKNRIIADELLSTGTVDHVPVYPREVIKRALMLNASALILIHNHPSGDPTPSEADL 109

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ I      L + +HDHII+G    +S + L  +
Sbjct: 110 SMTKEIQKGCKYLGLTMHDHIIVGAGTELSLRALGKL 146


>gi|171057386|ref|YP_001789735.1| DNA repair protein RadC [Leptothrix cholodnii SP-6]
 gi|238689101|sp|B1Y0I9|Y695_LEPCP RecName: Full=UPF0758 protein Lcho_0695
 gi|170774831|gb|ACB32970.1| DNA repair protein RadC [Leptothrix cholodnii SP-6]
          Length = 222

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 63/97 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGT+    VY RE+++R L L+A ++IL HNHPSG   PS AD 
Sbjct: 126 LFLDAQHRLIAYEPLFRGTLTQTSVYPREVLKRALALNAAALILAHNHPSGVAEPSRADE 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ++ T L  +++ V DH ++G+++ VSF    ++
Sbjct: 186 FLTQSLKTALALIDVRVLDHFVVGRESVVSFAERGLL 222


>gi|307243140|ref|ZP_07525314.1| DNA repair protein RadC [Peptostreptococcus stomatis DSM 17678]
 gi|306493500|gb|EFM65479.1| DNA repair protein RadC [Peptostreptococcus stomatis DSM 17678]
          Length = 228

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I+D   S G+++   V+ RE+    ++  + +IIL+HNHPSGN  PS  DI
Sbjct: 132 ILLNTKNEIISDVDVSIGSLNSSIVHPREVFIEAIKRRSNAIILMHNHPSGNSEPSKEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ +      L I V DHI+IG   + S K  
Sbjct: 192 MITKRLNECGKMLGINVLDHIVIGDGNYYSLKEN 225


>gi|186894518|ref|YP_001871630.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+]
 gi|186697544|gb|ACC88173.1| DNA repair protein RadC [Yersinia pseudotuberculosis PB1/+]
          Length = 156

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + L+  E+   GT+ H  V+ RE+V+  L+ +A ++IL HNHPSG    S  D 
Sbjct: 61  MYLDNQHCLLESEILFTGTLSHTEVHPREVVKLALKHNAAAVILAHNHPSGTTEISQQDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ I+  L  + I V DH+++G +  VSF    ++
Sbjct: 121 HITQRIVKALALMQIRVLDHLVVG-NGVVSFAEQGLL 156


>gi|125973275|ref|YP_001037185.1| DNA repair protein RadC [Clostridium thermocellum ATCC 27405]
 gi|281417478|ref|ZP_06248498.1| DNA repair protein RadC [Clostridium thermocellum JW20]
 gi|125713500|gb|ABN51992.1| DNA repair protein RadC [Clostridium thermocellum ATCC 27405]
 gi|281408880|gb|EFB39138.1| DNA repair protein RadC [Clostridium thermocellum JW20]
          Length = 223

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +   E+   GTI+  PVY R IV+  L   A S+IL HNHP G  NPS ADI
Sbjct: 125 ICLDAQNRVNYAELVHEGTINEAPVYPRIIVETALRHKANSVILAHNHPGGTLNPSKADI 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ I   L  ++I V DHII+    +VSF    ++
Sbjct: 185 EATKRIKAALEAISIKVVDHIIVCGGQYVSFAEKGLL 221


>gi|329119079|ref|ZP_08247771.1| DNA repair protein RadC [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464818|gb|EGF11111.1| DNA repair protein RadC [Neisseria bacilliformis ATCC BAA-1200]
          Length = 224

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N LI     +RGT+    VY+RE+V+  L+  A ++IL HNHP G+P PS+ADI
Sbjct: 128 LLLNSRNRLIDCVELARGTVAENAVYVREVVKLALDRHAAALILAHNHPGGSPEPSEADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  +   L  +++ + DH +I     VSF    ++
Sbjct: 188 AFTGRLKQALELVDVRLLDHFVITAQRAVSFAERGLV 224


>gi|121582506|ref|YP_974038.1| DNA repair protein RadC [Acidovorax sp. JS42]
 gi|120608564|gb|ABM44303.1| DNA repair protein RadC [Acidovorax sp. JS42]
          Length = 164

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I      RGT+    VY RE+V+  L L+A ++I  HNHPSG P PS AD 
Sbjct: 68  IFLDAQNRVIEYIELFRGTLTQTSVYPREVVKTSLRLNAAAVIFAHNHPSGVPEPSRADE 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ +   L  +++ V DH+++   A VSF    ++
Sbjct: 128 NLTRVLKDALALVDVRVLDHVVVAGGASVSFAQRGLL 164


>gi|256003755|ref|ZP_05428743.1| DNA repair protein RadC [Clostridium thermocellum DSM 2360]
 gi|255992316|gb|EEU02410.1| DNA repair protein RadC [Clostridium thermocellum DSM 2360]
 gi|316940493|gb|ADU74527.1| DNA repair protein RadC [Clostridium thermocellum DSM 1313]
          Length = 224

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +   E+   GTI+  PVY R IV+  L   A S+IL HNHP G  NPS ADI
Sbjct: 126 ICLDAQNRVNYAELVHEGTINEAPVYPRIIVETALRHKANSVILAHNHPGGTLNPSKADI 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ I   L  ++I V DHII+    +VSF    ++
Sbjct: 186 EATKRIKAALEAISIKVVDHIIVCGGQYVSFAEKGLL 222


>gi|169829398|ref|YP_001699556.1| DNA repair protein radC-like protein [Lysinibacillus sphaericus
           C3-41]
 gi|168993886|gb|ACA41426.1| DNA repair protein radC-like protein [Lysinibacillus sphaericus
           C3-41]
          Length = 223

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G+++   V+ REI +  ++ SA SII  HNHPSG P PS+ DI
Sbjct: 127 LFLNIKNQIIHRQTIFIGSLNASIVHPREIFREAVKRSAASIICAHNHPSGVPTPSEEDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ I      + I + DH+IIG   F+S K    
Sbjct: 187 EVTKRIEEAGYIMGIELIDHVIIGDHQFISLKEKGY 222


>gi|163851630|ref|YP_001639673.1| DNA repair protein RadC [Methylobacterium extorquens PA1]
 gi|163663235|gb|ABY30602.1| DNA repair protein RadC [Methylobacterium extorquens PA1]
          Length = 248

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 61/97 (62%), Positives = 79/97 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ RGT+DH PVY RE+ +R LEL++T+IIL HNHPSG+P PS ADI
Sbjct: 152 LFLDRRNHLIADEVQGRGTVDHTPVYPREVARRALELASTAIILAHNHPSGDPAPSGADI 211

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I++ L+PL I+VHDH+I+G+D   S KGL++I
Sbjct: 212 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 248


>gi|91201867|emb|CAJ74927.1| similar to DNA repair protein RadC [Candidatus Kuenenia
           stuttgartiensis]
          Length = 232

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 53/94 (56%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD  N +I +   S G++    V+ RE+    ++ SA S++ VHNHPSG+P PS  DI 
Sbjct: 136 LLDNKNRIIKELTISIGSLTLSIVHPREVFSPAIKESAASVVFVHNHPSGDPEPSKEDIQ 195

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           +TQ +    N + I V DHII+G   +VS +   
Sbjct: 196 ITQRLQEVGNIVGIKVLDHIIVGNGCYVSLRDKG 229


>gi|83589400|ref|YP_429409.1| DNA repair protein RadC [Moorella thermoacetica ATCC 39073]
 gi|123524970|sp|Q2RL23|Y536_MOOTA RecName: Full=UPF0758 protein Moth_0536
 gi|83572314|gb|ABC18866.1| DNA replication and repair protein RadC [Moorella thermoacetica
           ATCC 39073]
          Length = 229

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 55/95 (57%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N ++  +  S G+++    + RE+ +  +  SA +IIL HNHPSG+P PS  DI +
Sbjct: 135 LNTKNQVLGIDNVSVGSLNSSLAHPREVFKDPIRRSAAAIILAHNHPSGDPTPSQEDIMV 194

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++   + L I V DH+IIG   F S K   ++
Sbjct: 195 TRRLVEAGHILGIEVLDHLIIGDGRFTSLKERNLL 229


>gi|327439515|dbj|BAK15880.1| DNA repair protein [Solibacillus silvestris StLB046]
          Length = 232

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++  +    G+++   V+ REI +  ++ SA SII  HNHPSG P PS  DI
Sbjct: 136 LFLNVKNQVLHKQTIFVGSLNASIVHPREIFREAVKRSAASIICSHNHPSGIPTPSPEDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T  +      + + + DH+IIG   F+S K    
Sbjct: 196 DVTTRLYEAGKIVGVDLLDHVIIGDHQFISMKEKGY 231


>gi|323141285|ref|ZP_08076181.1| DNA repair protein RadC [Phascolarctobacterium sp. YIT 12067]
 gi|322414242|gb|EFY05065.1| DNA repair protein RadC [Phascolarctobacterium sp. YIT 12067]
          Length = 252

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I  E+ S G++ +  V+ RE+    +   A SI + HNHPSG+P PS  D 
Sbjct: 154 ILLNSKNKVIGTELVSEGSLTNSVVHPREVFLPAILQHAASICVAHNHPSGDPQPSIEDR 213

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++     L I + DH+IIG  A+ SF+    +
Sbjct: 214 QLTAVLLAAGQTLGIPLLDHLIIGDGAYYSFQEDGAL 250


>gi|254561399|ref|YP_003068494.1| DNA repair protein RadC [Methylobacterium extorquens DM4]
 gi|254268677|emb|CAX24636.1| DNA repair protein RadC [Methylobacterium extorquens DM4]
          Length = 248

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 61/97 (62%), Positives = 79/97 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ RGT+DH PVY RE+ +R LEL++T+IIL HNHPSG+P PS ADI
Sbjct: 152 LFLDRRNHLIADEVQGRGTVDHTPVYPREVARRALELASTAIILAHNHPSGDPAPSGADI 211

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I++ L+PL I+VHDH+I+G+D   S KGL++I
Sbjct: 212 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 248


>gi|83648347|ref|YP_436782.1| DNA repair protein [Hahella chejuensis KCTC 2396]
 gi|83636390|gb|ABC32357.1| DNA repair protein [Hahella chejuensis KCTC 2396]
          Length = 183

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 41/96 (42%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA EV  RG ID   +Y RE+V+  L  +A  +I+ HNHPSG+P PS  D 
Sbjct: 75  LFLDTQNRLIAYEVLFRGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQ 134

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T  ++  L  + I + DH ++G D  VS     I
Sbjct: 135 LITYRLLQALMLVEIPLIDHFVVGGDQVVSMAAQGI 170


>gi|160897347|ref|YP_001562929.1| DNA repair protein RadC [Delftia acidovorans SPH-1]
 gi|238687206|sp|A9BYK1|Y1904_DELAS RecName: Full=UPF0758 protein Daci_1904
 gi|160362931|gb|ABX34544.1| DNA repair protein RadC [Delftia acidovorans SPH-1]
          Length = 226

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGT+    VY RE+V R L   A ++IL HNHPSG    S AD 
Sbjct: 130 LFLDGQHRLIALEEMFRGTLTRTSVYPREVVLRALHHHAGAVILAHNHPSGQVQASAADK 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQN+   L  ++I V DH+I+   A +S  G  ++
Sbjct: 190 AVTQNLQAALRLVDIQVLDHVIVAPGASLSMAGQGML 226


>gi|291087662|ref|ZP_06347068.2| DNA repair protein RadC [Clostridium sp. M62/1]
 gi|291074382|gb|EFE11746.1| DNA repair protein RadC [Clostridium sp. M62/1]
          Length = 252

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +  +  N+LI +    RGT++      REI    L   A  + LVHNHPSG+P+PS  DI
Sbjct: 156 MMFNTKNMLIRESCLFRGTVNASVASAREIFIEALRYHAVRLALVHNHPSGDPSPSGEDI 215

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L + + DH+IIG +++ SFK   II
Sbjct: 216 RLTRQVAQAGELLGVTLLDHVIIGDNSYFSFKERGII 252


>gi|114767352|ref|ZP_01446159.1| DNA repair protein RadC [Pelagibaca bermudensis HTCC2601]
 gi|114540556|gb|EAU43631.1| DNA repair protein RadC [Roseovarius sp. HTCC2601]
          Length = 168

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 3/100 (3%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD+ N LI D++ SRG+IDHVPVY+ E+++  L L A+++IL HNHPSG+P PS ADI
Sbjct: 67  LLLDRKNKLIRDKIMSRGSIDHVPVYVSEVMRSALVLDASALILCHNHPSGDPQPSQADI 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAF---VSFKGLRII 97
           +MT+ I+     ++I +HDH+I+G        S +   ++
Sbjct: 127 DMTRKIVDACRVMDITLHDHLIVGFGREQAAFSMRAAGML 166


>gi|326391442|ref|ZP_08212978.1| DNA repair protein RadC [Thermoanaerobacter ethanolicus JW 200]
 gi|325992521|gb|EGD50977.1| DNA repair protein RadC [Thermoanaerobacter ethanolicus JW 200]
          Length = 226

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E S++SIILVHNHPSG+P PS  DI
Sbjct: 127 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSSSSIILVHNHPSGDPTPSREDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ ++   N L I V DH+IIG    +S K    
Sbjct: 187 EVTKRLVEGGNILGIKVLDHVIIGDGRGISLKEKGY 222


>gi|307266691|ref|ZP_07548219.1| DNA repair protein RadC [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918293|gb|EFN48539.1| DNA repair protein RadC [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 226

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E S++SIILVHNHPSG+P PS  DI
Sbjct: 127 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSSSSIILVHNHPSGDPTPSREDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ ++   + L I V DH+IIG    +S K    
Sbjct: 187 EVTKRLVEGGDILGIKVLDHVIIGDGRGISLKEKGY 222


>gi|304439839|ref|ZP_07399733.1| DNA repair protein RadC [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371578|gb|EFM25190.1| DNA repair protein RadC [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 245

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 59/95 (62%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD    LI     S+GT+D   V+ RE+ +  +E++A SII+ HNHPSG+P PS  D ++
Sbjct: 150 LDTKKCLIKSSEISKGTLDATVVHPREVFREAIEVNAHSIIISHNHPSGDPVPSQKDRDI 209

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T  ++   + LNI + DHI+IG+  + SF+   I+
Sbjct: 210 TNILLKAGDILNIELVDHIVIGRGKYFSFREEGIL 244


>gi|150015380|ref|YP_001307634.1| DNA repair protein RadC [Clostridium beijerinckii NCIMB 8052]
 gi|189029392|sp|A6LQP8|Y490_CLOB8 RecName: Full=UPF0758 protein Cbei_0490
 gi|149901845|gb|ABR32678.1| DNA repair protein RadC [Clostridium beijerinckii NCIMB 8052]
          Length = 229

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  NI++  +   +G+++   V+ REI ++ +  ++ SII+ HNHPSG+P PS  DI
Sbjct: 133 VLLNTKNIVVGIKDVFKGSLNTSVVHPREIFKQAISKNSASIIICHNHPSGDPTPSREDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  I    N + I + DHIIIG + FVS K   +I
Sbjct: 193 NITLRIKECGNIIGIQLVDHIIIGNNKFVSLKERGLI 229


>gi|290969098|ref|ZP_06560628.1| putative DNA repair protein RadC [Megasphaera genomosp. type_1 str.
           28L]
 gi|290780858|gb|EFD93456.1| putative DNA repair protein RadC [Megasphaera genomosp. type_1 str.
           28L]
          Length = 229

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 54/95 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL   N LI  +  S GT++      R++ +  ++ +A S++LVHNHPSG+P PS  DI
Sbjct: 133 VFLSVKNRLITVQTLSVGTLNASLARARDVFRLAMQYNAASVVLVHNHPSGDPEPSREDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ I+     + I V DHIIIG   FVS     
Sbjct: 193 LLTKQIVKAGEIMGIPVLDHIIIGDGTFVSLCERG 227


>gi|238750426|ref|ZP_04611927.1| DNA repair protein RadC [Yersinia rohdei ATCC 43380]
 gi|238711357|gb|EEQ03574.1| DNA repair protein RadC [Yersinia rohdei ATCC 43380]
          Length = 156

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + L+  E    GT+ H  V+ RE+V+  L+ +A ++IL HNHPSG    S  D 
Sbjct: 61  MYLDNQHCLLERETLFTGTLCHTEVHPREVVKSALKHNAAAVILAHNHPSGTTEISQQDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ I+  L  + + V DH+++G    VSF    ++
Sbjct: 121 HITQRIVKALALVEVRVLDHLVVG-SEVVSFAERGLL 156


>gi|89052777|ref|YP_508228.1| DNA repair protein RadC [Jannaschia sp. CCS1]
 gi|88862326|gb|ABD53203.1| DNA repair protein RadC [Jannaschia sp. CCS1]
          Length = 257

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 52/97 (53%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+L+ADE Q+ GT+DHVPVY RE+++R LEL+AT++ILVHNHPSG+P PS+AD+
Sbjct: 161 LYLDRKNVLVADEAQADGTVDHVPVYPREVIKRALELNATALILVHNHPSGDPTPSEADV 220

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I    +  NI +HDH++IGK   +SF+    +
Sbjct: 221 QMTMAIRDAADVFNIAIHDHLVIGKARELSFRAEGYL 257


>gi|269137403|ref|YP_003294103.1| DNA repair protein [Edwardsiella tarda EIB202]
 gi|267983063|gb|ACY82892.1| DNA repair protein [Edwardsiella tarda EIB202]
          Length = 147

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++       GT++   VY RE+V+  L+ +A ++ILVHNHPSG+P  SDADI
Sbjct: 51  LLLDNRNRVLLWRELFYGTLNQTAVYPREVVKLALQHNAAAVILVHNHPSGHPEASDADI 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   +  +++ + DH I+  D  VS     ++
Sbjct: 111 ALTRRLQQAMALIDVRIPDHFIVAGDHTVSMAERGLL 147


>gi|237745564|ref|ZP_04576044.1| DNA repair protein radC [Oxalobacter formigenes HOxBLS]
 gi|229376915|gb|EEO27006.1| DNA repair protein radC [Oxalobacter formigenes HOxBLS]
          Length = 224

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LI      RGT+ H  VY RE+V+  L  +A ++I  HNHP G+  PS+AD 
Sbjct: 128 LFLDIKNKLIESSEMFRGTLSHTSVYPREVVKAALGRNAANVIFAHNHPFGSAEPSNADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++   L  ++I V DHII+      SF    I+
Sbjct: 188 TLTRSLKQALGLVDIRVLDHIIVAGKNTYSFAEYGIL 224


>gi|66768348|ref|YP_243110.1| putative DNA repair protein RadC [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188991850|ref|YP_001903860.1| putative RadC family DNA repair protein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|66573680|gb|AAY49090.1| putative DNA repair protein RadC [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733610|emb|CAP51815.1| putative RadC family DNA repair protein [Xanthomonas campestris pv.
           campestris]
          Length = 164

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  + ++A E   RGTI+   V+ R IVQR L L+A ++IL H HPSG   PS+AD 
Sbjct: 68  VFMDNLHQVLACEPMFRGTINSATVHARVIVQRALALNAAAVILSHQHPSGATEPSNADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DHIIIGK    SF    ++
Sbjct: 128 TLTHQLEAALALIDVRVLDHIIIGKGTPFSFAERGLL 164


>gi|313501259|gb|ADR62625.1| RadC [Pseudomonas putida BIRD-1]
          Length = 175

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  +A E+  RGTID   VY RE+V+R L  +A ++IL HNHPSG   PS  D+
Sbjct: 77  LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDV 136

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T ++   L  +++ V DHIIIG    +S      I
Sbjct: 137 HLTLSLKRGLALIDVRVLDHIIIGDGEPLSMVEHGWI 173


>gi|326387170|ref|ZP_08208780.1| DNA repair protein RadC [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208351|gb|EGD59158.1| DNA repair protein RadC [Novosphingobium nitrogenifigens DSM 19370]
          Length = 301

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 48/97 (49%), Positives = 67/97 (69%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N L+ D+V S GT+D   +Y REI+ + + + A S+ILVHNHPSG+P PS ADI
Sbjct: 205 LYLNVQNRLLLDQVVSDGTLDESAIYTREIIGKAMAIGAASLILVHNHPSGSPQPSRADI 264

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +I     LNI+VHDH+IIG++  VS K   +I
Sbjct: 265 QVTQKVIEAGRHLNIVVHDHVIIGREGHVSLKAKGLI 301


>gi|312795310|ref|YP_004028232.1| DNA repair protein radC [Burkholderia rhizoxinica HKI 454]
 gi|312167085|emb|CBW74088.1| DNA repair protein radC [Burkholderia rhizoxinica HKI 454]
          Length = 239

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    +I  E  SRG++ H  VY RE+V+R LE +A ++I+ HNHPSG   PS AD+
Sbjct: 143 LFLDTRLRMIHAEELSRGSLSHAAVYPREVVRRALETNAAALIIAHNHPSGAAQPSAADL 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT+ +   L  ++I + DH I+  D  +S     ++
Sbjct: 203 SMTRTLKNALCLMDIKLLDHFIVTSDTILSLARHGLL 239


>gi|310819987|ref|YP_003952345.1| DNA repair protein RadC [Stigmatella aurantiaca DW4/3-1]
 gi|309393059|gb|ADO70518.1| DNA repair protein RadC [Stigmatella aurantiaca DW4/3-1]
          Length = 249

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  +  N+L+ +   + GT++  PV  RE+    L L AT+++  HNHPSG+P PS  D+
Sbjct: 137 LCFNPRNVLLGNVRVAEGTMNTCPVDPREVYAAALSLRATALVFAHNHPSGDPEPSAQDV 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      L I V DH+++G   +VS     ++
Sbjct: 197 RLTAQLAEAGQLLGIKVLDHLVLGDGTYVSLLERGLL 233


>gi|83648279|ref|YP_436714.1| DNA repair protein [Hahella chejuensis KCTC 2396]
 gi|83636322|gb|ABC32289.1| DNA repair protein [Hahella chejuensis KCTC 2396]
          Length = 183

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 41/96 (42%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA EV  RG ID   +Y RE+V+  L  +A  +I+ HNHPSG+P PS  D 
Sbjct: 75  LFLDTQNRLIAYEVLFRGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQ 134

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T  ++  L  + I + DH ++G D  VS     I
Sbjct: 135 LITYRLLQALMLVEIPLIDHFVVGGDQVVSMAAQGI 170


>gi|194333569|ref|YP_002015429.1| DNA repair protein RadC [Prosthecochloris aestuarii DSM 271]
 gi|229470324|sp|B4S6M7|Y735_PROA2 RecName: Full=UPF0758 protein Paes_0735
 gi|194311387|gb|ACF45782.1| DNA repair protein RadC [Prosthecochloris aestuarii DSM 271]
          Length = 223

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 58/95 (61%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +I  E+ S GT++   ++ REI +  +  SA +II+VHNHPSG+   S+AD  +
Sbjct: 128 LNTKNQIIRHEIISVGTLNASLIHPREIFKEAIRESAHAIIVVHNHPSGDVEASNADKQV 187

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T  +    + L I + DH+IIG++ + SF+   ++
Sbjct: 188 TAVLKKAGSLLQIELLDHVIIGRETYFSFREHSLL 222


>gi|210612724|ref|ZP_03289439.1| hypothetical protein CLONEX_01641 [Clostridium nexile DSM 1787]
 gi|210151417|gb|EEA82425.1| hypothetical protein CLONEX_01641 [Clostridium nexile DSM 1787]
          Length = 232

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI +   S+GT++   V  RE+    LE +A SIIL+HNHPSG+P PS  DI
Sbjct: 136 LMLNTKSKLIGETDISKGTVNASLVSPRELFIEALEKNAVSIILMHNHPSGDPTPSKNDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    N + I + DHIIIG + ++SF   R++
Sbjct: 196 LLTKRVTDAGNLIGIELLDHIIIGNNCYISFAEQRLL 232


>gi|114567158|ref|YP_754312.1| DNA repair protein RadC [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317861|sp|Q0AWG3|Y1642_SYNWW RecName: Full=UPF0758 protein Swol_1642
 gi|114338093|gb|ABI68941.1| DNA repair protein RadC [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 235

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+   LI  +  S G +    V+ RE+ +  ++ SA S+ILVHNHPSG+P PS  DI
Sbjct: 139 LYLDRKGGLITMQDISIGGLHSSIVHPREVFKTAVKKSAASMILVHNHPSGDPTPSQEDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     + I + DH+IIG+  + S K   +I
Sbjct: 199 EITRRLIEAGKIMGIEILDHVIIGEINYCSLKARGLI 235


>gi|300721251|ref|YP_003710521.1| hypothetical protein XNC1_0176 [Xenorhabdus nematophila ATCC 19061]
 gi|297627738|emb|CBJ88264.1| putative associated with replication fork, DNA repair protein
           [Xenorhabdus nematophila ATCC 19061]
          Length = 230

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L   N +I  +   +GTI+ V ++ REIV+  ++++A SIIL HNHPSGNP PS AD 
Sbjct: 134 LCLTNQNKVICHDEMFKGTINKVEIHPREIVKLAVKVNAASIILAHNHPSGNPEPSLADK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II   + + + V DHI+IGK   VSF     I
Sbjct: 194 VVTEKIIEACDLVGVKVLDHIVIGKQYCVSFMERGWI 230


>gi|310639685|ref|YP_003944443.1| DNA repair protein-like protein [Paenibacillus polymyxa SC2]
 gi|309244635|gb|ADO54202.1| DNA repair protein-like protein [Paenibacillus polymyxa SC2]
          Length = 199

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 54/95 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I  E+ S G+++   ++ RE+    +   + SI+ VHNHPSG+P PS+ DI
Sbjct: 103 LLLNTKNRVIHKEIVSIGSLNATVIHPREVFGAAIRHCSASIVCVHNHPSGDPKPSEQDI 162

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
             T+ +    + + I V DH+IIG+  F S K   
Sbjct: 163 MATKRLAKAGDIIGIDVLDHVIIGESTFYSIKEHG 197


>gi|83814790|ref|YP_446439.1| DNA repair protein RadC [Salinibacter ruber DSM 13855]
 gi|123528135|sp|Q2S042|Y2338_SALRD RecName: Full=UPF0758 protein SRU_2338
 gi|83756184|gb|ABC44297.1| DNA repair protein RadC [Salinibacter ruber DSM 13855]
          Length = 233

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N++I D   S G +    V  R + ++ +   A ++I +HNHPSGNP PS  DI
Sbjct: 136 VHLNTANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGNPEPSREDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I VHDH+II      S     +I
Sbjct: 196 RITRQLAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 232


>gi|167037861|ref|YP_001665439.1| DNA repair protein RadC [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040758|ref|YP_001663743.1| DNA repair protein RadC [Thermoanaerobacter sp. X514]
 gi|166854998|gb|ABY93407.1| DNA repair protein RadC [Thermoanaerobacter sp. X514]
 gi|166856695|gb|ABY95103.1| DNA repair protein RadC [Thermoanaerobacter pseudethanolicus ATCC
           33223]
          Length = 236

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E S++SIILVHNHPSG+P PS  DI
Sbjct: 137 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSSSSIILVHNHPSGDPTPSREDI 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ ++   N L I V DH+IIG    +S K    
Sbjct: 197 EVTKRLVEGGNILGIKVLDHVIIGDGRGISLKEKGY 232


>gi|323489982|ref|ZP_08095203.1| DNA repair protein radC-like protein [Planococcus donghaensis
           MPA1U2]
 gi|323396278|gb|EGA89103.1| DNA repair protein radC-like protein [Planococcus donghaensis
           MPA1U2]
          Length = 224

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++  +    G+++   V+ REI +  +  S  SI+  HNHPSGNP PS  DI
Sbjct: 128 LFLNIKNQVMHRQTIFVGSLNASIVHPREIFREAVRRSTASIVCAHNHPSGNPAPSPEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++   + + I + DH+IIG   F+S K    +
Sbjct: 188 EVTKRLVEAGSIIGIELLDHVIIGDHQFISLKEKGFM 224


>gi|158320795|ref|YP_001513302.1| DNA repair protein RadC [Alkaliphilus oremlandii OhILAs]
 gi|172048007|sp|A8MHM4|Y1766_ALKOO RecName: Full=UPF0758 protein Clos_1766
 gi|158140994|gb|ABW19306.1| DNA repair protein RadC [Alkaliphilus oremlandii OhILAs]
          Length = 232

 Score =  123 bits (310), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L   + +IA E  S G+++   V+ RE+  R ++ S+++IIL HNHPSG+PNPS  DI
Sbjct: 136 LLLTTKHDIIAIENISVGSLNASIVHPREVFNRAIKRSSSAIILAHNHPSGDPNPSGEDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ +I   N + I V DHIIIG   + S K  ++I
Sbjct: 196 NITKRLIEAGNIIGISVLDHIIIGDGVYFSMKEHKLI 232


>gi|301060527|ref|ZP_07201367.1| putative DNA repair protein RadC [delta proteobacterium NaphS2]
 gi|300445370|gb|EFK09295.1| putative DNA repair protein RadC [delta proteobacterium NaphS2]
          Length = 243

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 55/96 (57%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FL + N +I D     G++    VY REI+   LE  A  ++ VHNHPSG+P PS  D +
Sbjct: 134 FLTRKNQVITDCDLFEGSLTGSAVYPREIMTLALEHKAAGLVFVHNHPSGDPAPSPEDQH 193

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T++++     + I V DH+IIG + + SF    +I
Sbjct: 194 LTRDLVWAAMLMGIQVLDHLIIGNNRYFSFADQGVI 229


>gi|71277925|ref|YP_269651.1| DNA repair protein, RadC family protein [Colwellia psychrerythraea
           34H]
 gi|71143665|gb|AAZ24138.1| DNA repair protein, RadC family protein [Colwellia psychrerythraea
           34H]
          Length = 158

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + +I      RGTID   VY RE+V+  L  +A ++IL HNHPSG  +PS AD 
Sbjct: 63  MLLDNQHQMIDFVELFRGTIDASAVYPREVVKTVLLENAAAVILTHNHPSGLNSPSIADK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ V DHIIIG+  + SF    ++
Sbjct: 123 DITKRLQEALALIDVRVLDHIIIGEGTY-SFAENGLL 158


>gi|256750969|ref|ZP_05491852.1| DNA repair protein RadC [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914796|ref|ZP_07132112.1| DNA repair protein RadC [Thermoanaerobacter sp. X561]
 gi|307723970|ref|YP_003903721.1| DNA repair protein RadC [Thermoanaerobacter sp. X513]
 gi|320116278|ref|YP_004186437.1| DNA repair protein RadC [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|256750079|gb|EEU63100.1| DNA repair protein RadC [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889731|gb|EFK84877.1| DNA repair protein RadC [Thermoanaerobacter sp. X561]
 gi|307581031|gb|ADN54430.1| DNA repair protein RadC [Thermoanaerobacter sp. X513]
 gi|319929369|gb|ADV80054.1| DNA repair protein RadC [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 226

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E S++SIILVHNHPSG+P PS  DI
Sbjct: 127 IMLNVKNKVIAIETISIGSLNTSIVHPREVFKAAIERSSSSIILVHNHPSGDPTPSREDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ ++   N L I V DH+IIG    +S K    
Sbjct: 187 EVTKRLVEGGNILGIKVLDHVIIGDGRGISLKEKGY 222


>gi|300853909|ref|YP_003778893.1| DNA repair protein, RadC family [Clostridium ljungdahlii DSM 13528]
 gi|300434024|gb|ADK13791.1| DNA repair protein, RadC family [Clostridium ljungdahlii DSM 13528]
          Length = 230

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  NI+I       G+++   V+ RE+    ++ ++ SII+ HNHPSG+P+PS+ DI
Sbjct: 132 IMLNTKNIVIGIRDVFIGSLNSALVHPREVFYYAIKKNSASIIVCHNHPSGDPSPSNEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           N+T  +      L I + DH+IIG + +VS K   I
Sbjct: 192 NITHRLKECGELLGIQLLDHLIIGNEIYVSLKQKGI 227


>gi|170747019|ref|YP_001753279.1| DNA repair protein RadC [Methylobacterium radiotolerans JCM 2831]
 gi|170653541|gb|ACB22596.1| DNA repair protein RadC [Methylobacterium radiotolerans JCM 2831]
          Length = 248

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 62/97 (63%), Positives = 77/97 (79%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ RGT+DH PVY RE+ +R LELSAT+IIL HNHPSG+P PS AD+
Sbjct: 152 LFLDKRNHLIADEVQGRGTVDHTPVYPREVARRALELSATAIILAHNHPSGDPAPSAADV 211

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I+  L PL I+VHDH+I+G++   S KGL++I
Sbjct: 212 AMTREIVAVLAPLKIVVHDHVILGRNGHASLKGLKLI 248


>gi|21673446|ref|NP_661511.1| DNA repair protein RadC [Chlorobium tepidum TLS]
 gi|30580476|sp|Q8KES1|Y611_CHLTE RecName: Full=UPF0758 protein CT0611
 gi|21646548|gb|AAM71853.1| DNA repair protein RadC [Chlorobium tepidum TLS]
          Length = 222

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL   N ++  E  + GT+    ++ REI +  +  SA SIILVHNHPSG+  PS+AD 
Sbjct: 126 LFLSTKNQILRHETITIGTLTASLIHPREIFKAAIRESAHSIILVHNHPSGDVQPSNADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +    + L I + DH+I+G + + SF+   ++
Sbjct: 186 QVTSILKKAGDLLQIELLDHVIVGNNDWFSFRDHALL 222


>gi|300113050|ref|YP_003759625.1| DNA repair protein RadC [Nitrosococcus watsonii C-113]
 gi|299538987|gb|ADJ27304.1| DNA repair protein RadC [Nitrosococcus watsonii C-113]
          Length = 224

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A E   RGTID   V+ RE+++R L  +A + IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVLAFEELFRGTIDGASVHPREVLKRALAHNAAAAILAHNHPSGIAEPSRADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  ++I V DHII+G     SF    +I
Sbjct: 188 CITQRLKEALALVDIRVLDHIIVGDGETFSFAERGLI 224


>gi|310659827|ref|YP_003937548.1| hypothetical protein CLOST_2528 [Clostridium sticklandii DSM 519]
 gi|308826605|emb|CBH22643.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 159

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 36/92 (39%), Positives = 55/92 (59%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N   +  V S+G+++   V+ RE+ +  +  +A +++L HNHPSGNP PS  DI +
Sbjct: 65  LDTKNQPTSVNVCSKGSLNASLVHPREVFKTAVISNAATVLLAHNHPSGNPEPSKEDIKI 124

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           T+ +      L I V DH+IIG D++ SFK  
Sbjct: 125 TKRLNEAGKILGIKVLDHLIIGSDSYYSFKEQ 156


>gi|121602861|ref|YP_989118.1| RadC family DNA repair protein [Bartonella bacilliformis KC583]
 gi|120615038|gb|ABM45639.1| DNA repair protein, RadC family [Bartonella bacilliformis KC583]
          Length = 265

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK + L++DEVQ  GTID  PVY RE+V R LELSA+ IILVHNHPSG+ +PS  DI
Sbjct: 169 LFLDKKHGLLSDEVQQTGTIDRTPVYPREVVSRALELSASGIILVHNHPSGDASPSQEDI 228

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +    N L+I +HDH+II ++ ++SFK L++I
Sbjct: 229 SMTYRLKDVANALDITLHDHLIIARNDYISFKALKLI 265


>gi|157827698|ref|YP_001496762.1| DNA repair protein RadC [Rickettsia bellii OSU 85-389]
 gi|157803002|gb|ABV79725.1| DNA repair protein RadC [Rickettsia bellii OSU 85-389]
          Length = 249

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 56/97 (57%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NILIADEV S+GTID   VY REI++R L   A++IILVHNHPSG+P+PS ADI
Sbjct: 153 LFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKADI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  I+     +NIIVHDH+II  + + SFK   ++
Sbjct: 213 DMTNIIVDMCKTINIIVHDHVIISNNKYFSFKSNMLL 249


>gi|171912382|ref|ZP_02927852.1| DNA repair protein RadC [Verrucomicrobium spinosum DSM 4136]
          Length = 231

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 5/102 (4%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+    L+ DEV  +GT++  P + REI++  L   A + IL HNHPSG+P PS+AD 
Sbjct: 130 LVLNTKLCLVHDEVVFQGTLNESPAHPREIIRAALIHRAHAFILAHNHPSGDPAPSEADR 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA-----FVSFKGLRII 97
             T+ I      + I + DH++IG        + SFK   +I
Sbjct: 190 RFTRRINEAAQLMQIELLDHVVIGAPRPGAKPYFSFKESGMI 231


>gi|77459227|ref|YP_348734.1| DNA repair protein RadC [Pseudomonas fluorescens Pf0-1]
 gi|77383230|gb|ABA74743.1| putative DNA repair protein [Pseudomonas fluorescens Pf0-1]
          Length = 164

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A EV   G+ID   VY R++V+R L  +A + I VHNHPSG   PS AD 
Sbjct: 68  IFLDARHRVLAFEVLFHGSIDGASVYPRQVVKRSLAHNAAATIFVHNHPSGCTEPSQADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  + + V DH I+G+   +S      +
Sbjct: 128 VLTARLKEALALIEVRVLDHFIVGEGRPLSLAEHGWL 164


>gi|304559927|gb|ADM42591.1| DNA repair protein RadC family protein [Edwardsiella tarda FL6-60]
          Length = 161

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    G+++HV V+ RE+V+  L  +A +++L HNHPSG+P PS AD 
Sbjct: 65  LYLDNLHCLLESETLFAGSVNHVQVHPREVVKSALRFNAAAVVLAHNHPSGDPEPSKADR 124

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L  +++   DH+++G+D  VSF     I
Sbjct: 125 QLTDRIKEVLGLVDVKTLDHLVVGQDGIVSFAERGWI 161


>gi|254418550|ref|ZP_05032274.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
 gi|196184727|gb|EDX79703.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
          Length = 205

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 52/97 (53%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+ DE  + GT+DH PVY RE+V+R LELSA+++ILVHNHPSG+P PS ADI
Sbjct: 109 LYLDHRNTLLRDEWVAEGTVDHAPVYPREVVRRALELSASAMILVHNHPSGDPTPSHADI 168

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ ++     L++ VHDH++IG+    SFK L +I
Sbjct: 169 EMTRKVVNAAEALSLKVHDHLVIGRAGTASFKALGLI 205


>gi|224827125|ref|ZP_03700221.1| DNA repair protein RadC [Lutiella nitroferrum 2002]
 gi|224600634|gb|EEG06821.1| DNA repair protein RadC [Lutiella nitroferrum 2002]
          Length = 224

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL   N ++A E    GT+    VY RE+V+R L  +A  +I+ HNHPSG   PS AD 
Sbjct: 128 IFLTAQNRVLAVEEVFSGTLSETRVYPREVVRRALAHNAAGVIVAHNHPSGVAEPSSADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +  TL  +++ + DH +I      SF     +
Sbjct: 188 ALTDTLKATLQLVDVRLLDHFVITGSHAESFAERGWL 224


>gi|323527115|ref|YP_004229268.1| DNA repair protein RadC [Burkholderia sp. CCGE1001]
 gi|323384117|gb|ADX56208.1| DNA repair protein RadC [Burkholderia sp. CCGE1001]
          Length = 254

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  +RGT+  + VY REIV+R L L+A S+I+ HNHPSG   PS +D 
Sbjct: 158 LFLDARHRLIRSEESARGTLTRMAVYPREIVRRALALNAASLIVAHNHPSGAVQPSASDC 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +   L  +++ + DH++IG D+  SF     
Sbjct: 218 RLTRTLREALALIDVQLVDHLVIGADSVYSFARAGW 253


>gi|194336045|ref|YP_002017839.1| DNA repair protein RadC [Pelodictyon phaeoclathratiforme BU-1]
 gi|229470323|sp|B4SF75|Y935_PELPB RecName: Full=UPF0758 protein Ppha_0935
 gi|194308522|gb|ACF43222.1| DNA repair protein RadC [Pelodictyon phaeoclathratiforme BU-1]
          Length = 222

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I  E+ S GT++   ++ RE+ +  ++ S+ +IILVHNHPSG+  PS+AD 
Sbjct: 126 LHLNTKNQIIKTELVSVGTLNAALIHPREVFKSAIKESSHAIILVHNHPSGDVEPSNADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      + I + DHIIIGK    SF+   ++
Sbjct: 186 QVTDLLKQASTVIQIDLLDHIIIGKTGCFSFRESGLL 222


>gi|309791140|ref|ZP_07685673.1| DNA repair protein RadC [Oscillochloris trichoides DG6]
 gi|308226838|gb|EFO80533.1| DNA repair protein RadC [Oscillochloris trichoides DG6]
          Length = 236

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 55/95 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +        G+++   + + E+ +  +  ++T+II+VHNHPSG+P PS  DI
Sbjct: 137 VLLDTKNRVQQISTIYVGSVNTAVIRVGEVFRDAVRKNSTAIIMVHNHPSGDPTPSTEDI 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ I+     L+I V DH+IIG+  +VS +   
Sbjct: 197 LVTRQIVEAGKLLDIDVLDHLIIGRGRYVSMRERG 231


>gi|228475221|ref|ZP_04059947.1| DNA repair protein RadC [Staphylococcus hominis SK119]
 gi|228270832|gb|EEK12234.1| DNA repair protein RadC [Staphylococcus hominis SK119]
          Length = 225

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  NI+I +E    GT++   ++ RE+    +  S  +II++HNHPSG+  PS  DI
Sbjct: 128 LFLNTKNIVIKEETIFIGTLNSSVIHPREVFNAAIRASCNAIIVIHNHPSGDVTPSKEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG   F S      
Sbjct: 188 ATTIRLKECGQILGIELLDHIIIGDQKFTSLVEEGY 223


>gi|222839521|gb|EEE77858.1| predicted protein [Populus trichocarpa]
          Length = 226

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LIA E   RGT+    VY RE+V R L   A ++IL HNHPSG    S AD 
Sbjct: 130 LFLDSQHRLIALEEMFRGTLTRTSVYPREVVLRALHHHAGAVILAHNHPSGQVQASAADK 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ++   L  ++I V DH+I+   A +S  G  ++
Sbjct: 190 AVTQSLQAALGLVDIQVLDHVIVAPGASLSMAGQGML 226


>gi|270307935|ref|YP_003329993.1| DNA repair protein RadC [Dehalococcoides sp. VS]
 gi|270153827|gb|ACZ61665.1| DNA repair protein RadC [Dehalococcoides sp. VS]
          Length = 228

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI     S G++D   V+ RE+ +  L  SA ++IL HNHPSG+  PS  DI
Sbjct: 132 LMLDVKSRLIKVGHISAGSLDESVVHPREVFKEALSASAATVILAHNHPSGDTEPSPDDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            ++  +    + + I V DHIIIG  +F S K   ++
Sbjct: 192 GLSARLREAGSIMGIEVLDHIIIGGQSFTSLKRQGLL 228


>gi|161523974|ref|YP_001578986.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616]
 gi|189351265|ref|YP_001946893.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616]
 gi|160341403|gb|ABX14489.1| DNA repair protein RadC [Burkholderia multivorans ATCC 17616]
 gi|189335287|dbj|BAG44357.1| DNA repair protein [Burkholderia multivorans ATCC 17616]
          Length = 256

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+  + ++A ++I+ HNHPSG   PS  D 
Sbjct: 160 LYLDARHGLIDMEENTRGSLTRMAVYPREIVRSAMRMNAAALIVAHNHPSGAVQPSAEDR 219

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++GK    SF     +
Sbjct: 220 RLTRTLRDALALVDVRLLDHVVVGKADTFSFARAGWL 256


>gi|328954004|ref|YP_004371338.1| DNA repair protein RadC [Desulfobacca acetoxidans DSM 11109]
 gi|328454328|gb|AEB10157.1| DNA repair protein RadC [Desulfobacca acetoxidans DSM 11109]
          Length = 230

 Score =  123 bits (309), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +IA+E    GT+D   VY R++++  L+  AT +ILVHNHPSG   PS AD 
Sbjct: 134 IFLNSQNEVIAEETIQEGTVDQTVVYPRKVLEAALKHKATGLILVHNHPSGRLTPSTADR 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II    PL I VHDH+II K    S     +I
Sbjct: 194 ELTRAIIQAAQPLAITVHDHLIISKQGHYSMAEHHLI 230


>gi|254478306|ref|ZP_05091686.1| DNA repair protein RadC [Carboxydibrachium pacificum DSM 12653]
 gi|214035771|gb|EEB76465.1| DNA repair protein RadC [Carboxydibrachium pacificum DSM 12653]
          Length = 228

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/95 (42%), Positives = 59/95 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA E  S G+++   V+ RE+ +  +E SA+SIILVHNHPSG+P PS  D+
Sbjct: 134 VMLNVKNKIIAIETISIGSLNTSIVHPREVFKAAIERSASSIILVHNHPSGDPTPSRGDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ ++   N L I V DH+IIG    +S K   
Sbjct: 194 EVTKRLVEAGNILGIKVLDHVIIGDGRGISLKEKG 228


>gi|21231072|ref|NP_636989.1| RadC family protein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66768919|ref|YP_243681.1| RadC family protein [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21112702|gb|AAM40913.1| RadC family protein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66574251|gb|AAY49661.1| RadC family protein [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 159

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E    GTID   V+ R + +R L+L+A ++IL HNHPSGNP PS+AD 
Sbjct: 63  VFLDTKHHILATEHLFSGTIDGCDVHPRVVAKRALDLNAVAVILFHNHPSGNPEPSEADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  L+I V DH++IG     S      +
Sbjct: 123 KVTERLKQALALLDIRVLDHLVIGGRQHTSLAARGWV 159


>gi|255262247|ref|ZP_05341589.1| DNA repair protein RadC [Thalassiobium sp. R2A62]
 gi|255104582|gb|EET47256.1| DNA repair protein RadC [Thalassiobium sp. R2A62]
          Length = 190

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/97 (52%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LIADE  ++GT+ HVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS++DI
Sbjct: 94  LYLDRKNTLIADEQLAKGTVVHVPVYPREVVKRALELNASALILVHNHPSGDPTPSESDI 153

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  I      L++ +HDH+II K   +SFK   ++
Sbjct: 154 SMTVQIDQAARALDVTLHDHLIISKSRELSFKSEGLL 190


>gi|147669191|ref|YP_001214009.1| DNA repair protein RadC [Dehalococcoides sp. BAV1]
 gi|146270139|gb|ABQ17131.1| DNA replication and repair protein RadC [Dehalococcoides sp. BAV1]
          Length = 228

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI     S G+++   V+ RE+ +  L  SA S+IL HNHPSG+  PS  DI
Sbjct: 132 LMLDVKSRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDTEPSHDDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            ++  +      + I V DHIIIG  +F S K   ++
Sbjct: 192 GLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228


>gi|255280930|ref|ZP_05345485.1| DNA repair protein RadC [Bryantella formatexigens DSM 14469]
 gi|255268378|gb|EET61583.1| DNA repair protein RadC [Bryantella formatexigens DSM 14469]
          Length = 231

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 1   LFL---DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSD 57
           +FL   D    L++++  S GT++   V  REI    L   A  +IL+HNHPSGNP PS 
Sbjct: 131 VFLLSFDTKGELLSEKTISVGTVNQSCVSPREIFLEALSCRAVYVILLHNHPSGNPQPSP 190

Query: 58  ADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            D  +T  +  +   L I + DHII+G   + SF+    I
Sbjct: 191 EDRLLTMRVHESGKLLEIPLMDHIILGDRRYFSFREEGFI 230


>gi|118580303|ref|YP_901553.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
 gi|118503013|gb|ABK99495.1| DNA repair protein RadC [Pelobacter propionicus DSM 2379]
          Length = 166

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++  +  S G+++   V +RE+++  L  SA +I+LVHNHPSG+P PS  DI
Sbjct: 70  LHLDGKNRIVCLDRVSVGSLNQSIVNVREVLKSALLSSAAAILLVHNHPSGDPTPSGEDI 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +  +   + I V DHIIIG   +VSF    ++
Sbjct: 130 AITRRLKESGELICIPVLDHIIIGDGQYVSFVERGLL 166


>gi|314936234|ref|ZP_07843581.1| DNA repair protein RadC [Staphylococcus hominis subsp. hominis C80]
 gi|313654853|gb|EFS18598.1| DNA repair protein RadC [Staphylococcus hominis subsp. hominis C80]
          Length = 228

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  NI+I +E    GT++   ++ RE+    +  S  +II++HNHPSG+  PS  DI
Sbjct: 131 LFLNTKNIVIKEETIFIGTLNSSVIHPREVFNAAIRASCNAIIVIHNHPSGDVTPSKEDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG   F S      
Sbjct: 191 ATTIRLKECGQILGIELLDHIIIGDQKFTSLVEEGY 226


>gi|257066807|ref|YP_003153063.1| DNA repair protein RadC [Anaerococcus prevotii DSM 20548]
 gi|256798687|gb|ACV29342.1| DNA repair protein RadC [Anaerococcus prevotii DSM 20548]
          Length = 228

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/95 (43%), Positives = 57/95 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N++IA EV S G +    V  RE+ +  ++ SA S+ILVHNHPSGNP PS  D 
Sbjct: 132 ILLDSKNVIIAKEVISIGDLGSTVVNPREVFKPAIKKSAKSMILVHNHPSGNPKPSTEDF 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T  +    + L+I V DHI+IG  ++ SFK   
Sbjct: 192 LITDRLAEAGDILDIKVLDHIVIGNSSYYSFKKEG 226


>gi|206890446|ref|YP_002249007.1| DNA repair protein RadC [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742384|gb|ACI21441.1| DNA repair protein RadC [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 222

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 52/95 (54%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  + LI       GT++H  V+ REI    +   A  II VHNHPSG+  PS  DI +
Sbjct: 125 LDGASNLIQKRTVFIGTLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDSEPSKQDIEI 184

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++     L I V DHIII K+ + SF+   ++
Sbjct: 185 TKRLVEIGKMLGIEVIDHIIISKNGYYSFQAEGML 219


>gi|78048960|ref|YP_365135.1| RadC family DNA repair protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78037390|emb|CAJ25135.1| RadC family DNA repair protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 187

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E    GTID   V+ R + +R L+L+A ++IL HNHPSGNP PS+AD 
Sbjct: 91  VFLDIKHQILATEHLFFGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADR 150

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +   L+ L+I V DH++IG    +S      
Sbjct: 151 KVTERLQKALSLLDIRVLDHLVIGGRQHISLAARGW 186


>gi|253700088|ref|YP_003021277.1| DNA repair protein RadC [Geobacter sp. M21]
 gi|251774938|gb|ACT17519.1| DNA repair protein RadC [Geobacter sp. M21]
          Length = 167

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++  ++ S G+++   V+ RE+ +  L  SA ++IL+HNHP+G+P PS  D+
Sbjct: 72  LHLDGKNRIVCIDMVSTGSLNQSIVHPRELFKTALLSSAAAVILLHNHPTGDPTPSTEDL 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +      + I V DHIIIG + + SF    
Sbjct: 132 TITRRLQEAGELIGIRVLDHIIIGDN-YYSFTERG 165


>gi|221211489|ref|ZP_03584468.1| DNA repair protein RadC [Burkholderia multivorans CGD1]
 gi|221168850|gb|EEE01318.1| DNA repair protein RadC [Burkholderia multivorans CGD1]
          Length = 256

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+  + ++A ++I+ HNHPSG   PS  D 
Sbjct: 160 LYLDARHGLIDMEENTRGSLTRMAVYPREIVRSAMRMNAAALIVAHNHPSGAVQPSAEDR 219

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++GK    SF     +
Sbjct: 220 RLTRTLRDALALVDVRLLDHVVVGKADTFSFARAGWL 256


>gi|322807326|emb|CBZ04900.1| DNA repair protein RadC [Clostridium botulinum H04402 065]
          Length = 228

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+        GT++   V+ REI    ++ +  SII+ HNHPSG+P PS  DI
Sbjct: 132 LILNTKNIVTYTRDVFIGTLNSSIVHPREIFCEAIKKNGASIIICHNHPSGDPTPSKEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      + I + DHIIIG++ +VS K    I
Sbjct: 192 NITLRLKECGKLIGIDLLDHIIIGENKYVSMKEKGTI 228


>gi|222151541|ref|YP_002560697.1| DNA repair protein RadC homolog [Macrococcus caseolyticus JCSC5402]
 gi|222120666|dbj|BAH18001.1| DNA repair protein RadC homolog [Macrococcus caseolyticus JCSC5402]
          Length = 223

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 56/95 (58%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  NI++ +     G+++   V+ RE+ +  ++ SA +II+VHNHPSG+P PS  DI  
Sbjct: 129 LNTKNIVMHESTIFIGSLNASIVHPREVFKEAVKRSAAAIIVVHNHPSGDPEPSYEDIEA 188

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +I       I V DHIIIG   +VS K   I+
Sbjct: 189 TKRLIKCGEIFGIDVLDHIIIGDGYYVSIKEKGIL 223


>gi|298530828|ref|ZP_07018230.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510202|gb|EFI34106.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1]
          Length = 160

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D  N +I  +V ++GT+D +PV+ REI++  +   A+ IIL HNHP G   PS  D 
Sbjct: 64  LFVDNKNRMICKKVVAKGTVDQIPVFPREIIRHAILKQASGIILGHNHPGGASEPSKQDR 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L I V DHIII      SF+    +
Sbjct: 124 ELTSKIKRIAMELGIRVLDHIIICDSGHFSFQENGYL 160


>gi|187778415|ref|ZP_02994888.1| hypothetical protein CLOSPO_02009 [Clostridium sporogenes ATCC
           15579]
 gi|187772040|gb|EDU35842.1| hypothetical protein CLOSPO_02009 [Clostridium sporogenes ATCC
           15579]
          Length = 228

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+        GT++   V+ REI    ++ +  SII+ HNHPSG+P PS  DI
Sbjct: 132 LILNTKNIVTYIRDVFIGTLNSSIVHPREIFCEAIKKNGASIIICHNHPSGDPTPSKEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      + I + DHIIIG++ +VS K    I
Sbjct: 192 NITLRLKECGKLIGIDLLDHIIIGENKYVSMKEKGTI 228


>gi|289550582|ref|YP_003471486.1| DNA repair protein RadC [Staphylococcus lugdunensis HKU09-01]
 gi|315658077|ref|ZP_07910949.1| DNA repair protein RadC [Staphylococcus lugdunensis M23590]
 gi|289180114|gb|ADC87359.1| DNA repair protein RadC [Staphylococcus lugdunensis HKU09-01]
 gi|315496406|gb|EFU84729.1| DNA repair protein RadC [Staphylococcus lugdunensis M23590]
          Length = 225

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  NI+I +     GT++   ++ REI    L  ++ S+I+VHNHPSG+  PS  DI
Sbjct: 128 LFLDTKNIVIKEHTIFVGTLNSTIIHPREIFAAALRYTSNSLIVVHNHPSGDVTPSSEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  +    + L I + DHIIIG + F S      I
Sbjct: 188 ATTIRLKECGDILGISLLDHIIIGNNKFTSLCDEGYI 224


>gi|253991430|ref|YP_003042786.1| hypothetical protein PAU_03957 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782880|emb|CAQ86045.1| similar putative radc-like protein ykfg of escherichia coli
           [Photorhabdus asymbiotica]
          Length = 156

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E+   GT+ H  V+ RE+V+  L+ +A ++IL HNHPSG  + S  D 
Sbjct: 61  LYLDNQHCLLEREILFTGTLSHTEVHPREVVKLALKYNAAAVILAHNHPSGTTDISQQDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ I+  L  + + V DH+++G +  VSF    ++
Sbjct: 121 HITQRIVKALALVEVRVLDHLVVG-NEVVSFAEQGLL 156


>gi|229589475|ref|YP_002871594.1| putative DNA repair protein [Pseudomonas fluorescens SBW25]
 gi|229361341|emb|CAY48211.1| putative DNA repair protein [Pseudomonas fluorescens SBW25]
          Length = 164

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A EV   G+ID   VY R++V+R L  +A + I VHNHPSG   PS AD 
Sbjct: 68  IFLDAQHRVLAFEVLFHGSIDGASVYPRQVVKRSLAHNAAAAIFVHNHPSGCTEPSQADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  + + V DH I+G+   +S      +
Sbjct: 128 VLTARLKEALALIEVRVMDHFIVGEGRPLSLAEYGWL 164


>gi|330818061|ref|YP_004361766.1| DNA repair protein RadC [Burkholderia gladioli BSR3]
 gi|327370454|gb|AEA61810.1| DNA repair protein RadC [Burkholderia gladioli BSR3]
          Length = 282

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E  + G++  + VY REIV+R LE  A ++I+ HNHPSG   PS  D 
Sbjct: 186 LYLDAQHRLLELEESTIGSLTRMAVYPREIVRRALESGAAALIVAHNHPSGVVRPSAEDR 245

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ + DHI++G+    SF    ++
Sbjct: 246 RLTQLLRDALALVDVRLTDHIVVGESETFSFAQAGLL 282


>gi|238790648|ref|ZP_04634412.1| DNA repair protein RadC [Yersinia frederiksenii ATCC 33641]
 gi|238721253|gb|EEQ12929.1| DNA repair protein RadC [Yersinia frederiksenii ATCC 33641]
          Length = 194

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + LI  E  S GT++   VY REIV+  L  +  ++IL HNHPSG P PS+ D 
Sbjct: 98  MHLDNQHRLIHCETASLGTLNQTAVYPREIVKTALYHNTAAVILAHNHPSGIPEPSNYDR 157

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  + T LN +++ V DHI++G+ A VSF     +
Sbjct: 158 QMTDRVRTALNLIDVKVLDHIVLGQGAQVSFAERGWL 194


>gi|293375072|ref|ZP_06621363.1| DNA repair protein RadC family protein [Turicibacter sanguinis
           PC909]
 gi|292646314|gb|EFF64333.1| DNA repair protein RadC family protein [Turicibacter sanguinis
           PC909]
          Length = 149

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 51/96 (53%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L+  N      V S G+++   V+ RE+ +  +  +A S++  HNHPSG+  PSD DI 
Sbjct: 54  CLNTKNEPTNITVVSVGSLNKAIVHPREVFKTAILSNAASVMAFHNHPSGDTTPSDQDIQ 113

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T  ++     L I + DH+IIG  +F S K    +
Sbjct: 114 LTHRLVEAGELLGIKLLDHLIIGDGSFTSLKEKGYL 149


>gi|294670872|ref|ZP_06735728.1| hypothetical protein NEIELOOT_02576 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307359|gb|EFE48602.1| hypothetical protein NEIELOOT_02576 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 224

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LI     SRGT+    VY+RE+V+  L+  A S+I+ HNHP G   PS +DI
Sbjct: 128 LLLNRQNRLINCVELSRGTVAENTVYVREVVKLALDHYADSLIVAHNHPGGAAEPSPSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  +   L  +++ + DH I+     VS     ++
Sbjct: 188 EWTGRLKQALELVDVRLLDHFIVTARQAVSLAEQGLL 224


>gi|24461706|gb|AAN62275.1|AF440524_62 putative DNA repair protein RadC [Pseudomonas aeruginosa]
          Length = 166

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL   + +IA E   RGTID   ++ R +VQR L  +A+++I  H HPSG   PS +D 
Sbjct: 70  VFLTAKHQVIACETLFRGTIDTAQIHPRVVVQRALLHNASALIAAHQHPSGCSEPSSSDE 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + + L  +++ + DH IIGK    SF    ++
Sbjct: 130 RLTQRLKSALEYVDVRLLDHFIIGKGQPFSFAANALL 166


>gi|84500637|ref|ZP_00998886.1| DNA repair protein [Oceanicola batsensis HTCC2597]
 gi|84391590|gb|EAQ03922.1| DNA repair protein [Oceanicola batsensis HTCC2597]
          Length = 251

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/97 (55%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N+L+ADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PS ADI
Sbjct: 155 LFLDRKNVLVADEPQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSPADI 214

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  +    + L I VHDH++IG+    SF+    +
Sbjct: 215 DMTAQVAAAADALGITVHDHLVIGRATEFSFRAQGYL 251


>gi|218530437|ref|YP_002421253.1| DNA repair protein RadC [Methylobacterium chloromethanicum CM4]
 gi|218522740|gb|ACK83325.1| DNA repair protein RadC [Methylobacterium chloromethanicum CM4]
          Length = 248

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/97 (62%), Positives = 79/97 (81%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ N LIADEVQ RGT+DH PVY R + +R LEL++T+IILVHNHPSG+P PS ADI
Sbjct: 152 LFLDRRNHLIADEVQGRGTVDHTPVYPRGVARRALELASTAIILVHNHPSGDPAPSKADI 211

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I++ L+PL I+VHDH+I+G+D   S KGL++I
Sbjct: 212 RMTREIVSVLDPLGIVVHDHVILGRDGHASLKGLKLI 248


>gi|312898568|ref|ZP_07757958.1| putative DNA repair protein RadC [Megasphaera micronuciformis
           F0359]
 gi|310620487|gb|EFQ04057.1| putative DNA repair protein RadC [Megasphaera micronuciformis
           F0359]
          Length = 229

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L++   N LIA    + GT++      R++ +  LE +A ++IL+HNHPSG+P PS  DI
Sbjct: 133 LYVSSKNKLIALRELTSGTLNESLAKARDVFRYALEYNAAAVILIHNHPSGDPTPSKEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             TQ I      + I V DHIIIG   +VS      I
Sbjct: 193 KATQCIAEAGRVMGIPVLDHIIIGDGTYVSLCERGYI 229


>gi|127512189|ref|YP_001093386.1| DNA repair protein RadC [Shewanella loihica PV-4]
 gi|126637484|gb|ABO23127.1| DNA repair protein RadC [Shewanella loihica PV-4]
          Length = 157

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + LI       GTID   VY RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 62  MMLDSQHRLIEFNEMFFGTIDAANVYPREVVKAVLLCNAAAVILAHNHPSGCAEPSAADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I  L+ +++ V DHI++G    VSF     +
Sbjct: 122 RITERLINALSTIDVPVLDHIVVGD-QCVSFAERGWL 157


>gi|157150253|ref|YP_001450516.1| DNA repair protein RadC [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|229485564|sp|A8AXK6|Y1229_STRGC RecName: Full=UPF0758 protein SGO_1229
 gi|157075047|gb|ABV09730.1| DNA repair protein [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 226

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G++       REI+   ++  ATSIILVHNHPSG   PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSLTRSLAEPREILHYAIKHMATSIILVHNHPSGATRPSRDDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ I      +  ++ DH+I+G D++ S++  
Sbjct: 189 QVTEKIKEACEMMGFVLLDHLIVGGDSYYSYREE 222


>gi|317403649|gb|EFV84137.1| hypothetical protein HMPREF0005_02879 [Achromobacter xylosoxidans
           C54]
          Length = 149

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D    L++ E    GT+D  PVY RE+ +R L L+A ++++ HNHPSGN  PS+ADI
Sbjct: 52  LFMDSQLRLLSAEPLFYGTLDQAPVYPREVARRALMLNAAALVIAHNHPSGNHTPSNADI 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT ++   L   +I + DH ++G     SF  L ++
Sbjct: 112 RMTTSLREALGLFDIRLLDHFVVGAGKMTSFAELGLM 148


>gi|326791184|ref|YP_004309005.1| DNA repair protein RadC [Clostridium lentocellum DSM 5427]
 gi|326541948|gb|ADZ83807.1| DNA repair protein RadC [Clostridium lentocellum DSM 5427]
          Length = 234

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 56/96 (58%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD    +I  E  S+G++    V+ RE+ +  ++ SA SII VHNHPSG+P PS+ D+ 
Sbjct: 139 LLDAKCKMIGYETVSKGSLTASIVHPREVYRIAIQKSAHSIIAVHNHPSGDPTPSEEDLQ 198

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           MT+ +    + + I + DHIIIG   + SFK    +
Sbjct: 199 MTKRLQKVGDLVGIPLLDHIIIGDGIYKSFKEESYL 234


>gi|170025352|ref|YP_001721857.1| DNA repair protein RadC [Yersinia pseudotuberculosis YPIII]
 gi|169751886|gb|ACA69404.1| DNA repair protein RadC [Yersinia pseudotuberculosis YPIII]
          Length = 156

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + L+  E    G+I H  V+ RE+V+  L  +A ++IL HNHPSG    S  D 
Sbjct: 61  MYLDNQHCLLGHEALFTGSISHTEVHPRELVKAALRHNAAAVILAHNHPSGTTEISQQDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ I+  L  + + V DH+++G +  VSF    ++
Sbjct: 121 HITQRIVKALALVEVRVLDHLVVG-NEVVSFAEQGLL 156


>gi|148380954|ref|YP_001255495.1| DNA repair protein, RadC family [Clostridium botulinum A str. ATCC
           3502]
 gi|153933543|ref|YP_001385323.1| DNA repair protein RadC [Clostridium botulinum A str. ATCC 19397]
 gi|153937584|ref|YP_001388731.1| DNA repair protein RadC [Clostridium botulinum A str. Hall]
 gi|168181688|ref|ZP_02616352.1| DNA repair protein, RadC family [Clostridium botulinum Bf]
 gi|237796455|ref|YP_002864007.1| DNA repair protein, RadC family [Clostridium botulinum Ba4 str.
           657]
 gi|166218776|sp|A7FXW3|Y3028_CLOB1 RecName: Full=UPF0758 protein CLB_3028
 gi|166218777|sp|A5I683|Y3003_CLOBH RecName: Full=UPF0758 protein CBO3003/CLC_2900
 gi|259551858|sp|C3L3L0|Y3261_CLOB6 RecName: Full=UPF0758 protein CLJ_B3261
 gi|148290438|emb|CAL84565.1| DNA repair protein [Clostridium botulinum A str. ATCC 3502]
 gi|152929587|gb|ABS35087.1| DNA repair protein, RadC family [Clostridium botulinum A str. ATCC
           19397]
 gi|152933498|gb|ABS38997.1| DNA repair protein, RadC family [Clostridium botulinum A str. Hall]
 gi|182675184|gb|EDT87145.1| DNA repair protein, RadC family [Clostridium botulinum Bf]
 gi|229264193|gb|ACQ55226.1| DNA repair protein, RadC family [Clostridium botulinum Ba4 str.
           657]
          Length = 228

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+        GT++   V+ REI    ++ +  SII+ HNHPSG+P PS  DI
Sbjct: 132 LILNTKNIVTYIRDVFIGTLNSSIVHPREIFCEAIKKNGASIIICHNHPSGDPTPSKEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      + I + DHIIIG++ +VS K    I
Sbjct: 192 NITLRLKECGKLIGIDLLDHIIIGENKYVSMKEKGTI 228


>gi|238916926|ref|YP_002930443.1| DNA repair protein RadC [Eubacterium eligens ATCC 27750]
 gi|238872286|gb|ACR71996.1| DNA repair protein RadC [Eubacterium eligens ATCC 27750]
          Length = 230

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    LI D+V S GT     V +REI +  L+  A S++L+HNHPSGNP+PS  D+
Sbjct: 133 VMLDNRCRLIRDKVLSVGTSTGSMVSVREIFKEALDNRAASVVLLHNHPSGNPSPSREDM 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++++     + I + DHI+IG +++ SFK ++ I
Sbjct: 193 KVTRSVMEAGKIIGIELLDHIVIGDNSYFSFKQMQYI 229


>gi|158430296|pdb|2QLC|A Chain A, The Crystal Structure Of Dna Repair Protein Radc From
           Chlorobium Tepidum Tls
 gi|158430297|pdb|2QLC|B Chain B, The Crystal Structure Of Dna Repair Protein Radc From
           Chlorobium Tepidum Tls
 gi|158430298|pdb|2QLC|C Chain C, The Crystal Structure Of Dna Repair Protein Radc From
           Chlorobium Tepidum Tls
 gi|158430299|pdb|2QLC|D Chain D, The Crystal Structure Of Dna Repair Protein Radc From
           Chlorobium Tepidum Tls
 gi|158430300|pdb|2QLC|E Chain E, The Crystal Structure Of Dna Repair Protein Radc From
           Chlorobium Tepidum Tls
 gi|158430301|pdb|2QLC|F Chain F, The Crystal Structure Of Dna Repair Protein Radc From
           Chlorobium Tepidum Tls
 gi|158430302|pdb|2QLC|G Chain G, The Crystal Structure Of Dna Repair Protein Radc From
           Chlorobium Tepidum Tls
 gi|158430303|pdb|2QLC|H Chain H, The Crystal Structure Of Dna Repair Protein Radc From
           Chlorobium Tepidum Tls
          Length = 126

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL   N ++  E  + GT+    ++ REI +  +  SA SIILVHNHPSG+  PS+AD 
Sbjct: 30  LFLSTKNQILRHETITIGTLTASLIHPREIFKAAIRESAHSIILVHNHPSGDVQPSNADK 89

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +    + L I + DH+I+G + + SF+   ++
Sbjct: 90  QVTSILKKAGDLLQIELLDHVIVGNNDWFSFRDHALL 126


>gi|126653704|ref|ZP_01725623.1| DNA repair protein RadC [Bacillus sp. B14905]
 gi|126589741|gb|EAZ83876.1| DNA repair protein RadC [Bacillus sp. B14905]
          Length = 223

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I  +    G+++   V+ REI +  ++ SA SII  HNHPSG P PS  DI
Sbjct: 127 LFLNIKNQIIHRQTIFIGSLNASIVHPREIFREAVKRSAASIICAHNHPSGVPTPSAEDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ I      + I + DH+IIG   F+S K    
Sbjct: 187 DVTKRIEEAGYIMGIELIDHVIIGDHQFISLKEKGY 222


>gi|168179493|ref|ZP_02614157.1| DNA repair protein, RadC family [Clostridium botulinum NCTC 2916]
 gi|170755607|ref|YP_001782636.1| DNA repair protein RadC [Clostridium botulinum B1 str. Okra]
 gi|226950427|ref|YP_002805518.1| DNA repair protein RadC [Clostridium botulinum A2 str. Kyoto]
 gi|229485548|sp|B1IM02|Y1541_CLOBK RecName: Full=UPF0758 protein CLD_1541
 gi|254764432|sp|C1FVY2|Y3399_CLOBJ RecName: Full=UPF0758 protein CLM_3399
 gi|169120819|gb|ACA44655.1| DNA repair protein, RadC family [Clostridium botulinum B1 str.
           Okra]
 gi|182669777|gb|EDT81753.1| DNA repair protein, RadC family [Clostridium botulinum NCTC 2916]
 gi|226842668|gb|ACO85334.1| DNA repair protein, RadC family [Clostridium botulinum A2 str.
           Kyoto]
          Length = 228

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+        GT++   V+ REI    ++ +  SII+ HNHPSG+P PS  DI
Sbjct: 132 LILNTKNIVTYIRDVFIGTLNSSIVHPREIFCEAIKKNGASIIICHNHPSGDPTPSKEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      + I + DHIIIG++ +VS K    I
Sbjct: 192 NITLRLKECGKLIGIDLLDHIIIGENKYVSMKEKGTI 228


>gi|295677432|ref|YP_003605956.1| DNA repair protein RadC [Burkholderia sp. CCGE1002]
 gi|295437275|gb|ADG16445.1| DNA repair protein RadC [Burkholderia sp. CCGE1002]
          Length = 303

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 58/96 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  +RG++  + VY REIV+R L  +A S+I+ HNHPSG   PS +D 
Sbjct: 180 LFLDARHRLIRCEESARGSLTRMAVYPREIVRRALAANAASLIVAHNHPSGAVEPSASDC 239

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +TQ +   L  +++ + DH++IG D+  SF     
Sbjct: 240 RLTQTLRDALALVDVQLIDHLVIGADSVYSFARAGW 275


>gi|24373030|ref|NP_717072.1| RadC family DNA repair protein [Shewanella oneidensis MR-1]
 gi|24347195|gb|AAN54517.1|AE015589_12 DNA repair protein, RadC family [Shewanella oneidensis MR-1]
          Length = 157

 Score =  122 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + LI       GTID   VY RE+V+  L  +A ++I  HNHPSG   PS AD 
Sbjct: 62  MMLDSQHRLIEFNEMFFGTIDSASVYPREVVKAVLLCNAAAVIFAHNHPSGCAEPSSADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I  L  +++ V DHI++     VSF    ++
Sbjct: 122 RITERLIAALATIDVPVLDHIVVAD-TCVSFAERGLL 157


>gi|330428834|gb|AEC20168.1| DNA repair protein RadC [Pusillimonas sp. T7-7]
          Length = 225

 Score =  122 bits (307), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LI  E  SRGT+    VY REI++  L+  A ++IL HNHPSG   PS+AD+
Sbjct: 129 LYLDSQLRLITTEEISRGTLSQTSVYPREIIKSGLKHHAAALILAHNHPSGVAEPSEADL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++   L  ++I + DH+II     VS      I
Sbjct: 189 ALTRHLKHALALVDIRLLDHLIITGTGAVSLAERGQI 225


>gi|163849132|ref|YP_001637176.1| DNA repair protein RadC [Chloroflexus aurantiacus J-10-fl]
 gi|222527106|ref|YP_002571577.1| DNA repair protein RadC [Chloroflexus sp. Y-400-fl]
 gi|189029391|sp|A9WAJ7|Y3603_CHLAA RecName: Full=UPF0758 protein Caur_3603
 gi|254764431|sp|B9LEQ9|Y3887_CHLSY RecName: Full=UPF0758 protein Chy400_3887
 gi|163670421|gb|ABY36787.1| DNA repair protein RadC [Chloroflexus aurantiacus J-10-fl]
 gi|222450985|gb|ACM55251.1| DNA repair protein RadC [Chloroflexus sp. Y-400-fl]
          Length = 229

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +        G+++   V + E+ +  +  ++ +II+VHNHPSG P PS  DI
Sbjct: 131 ILLDTKNRVQQITTVYIGSLNSANVRVGEVFKEAVRRNSAAIIVVHNHPSGEPTPSMEDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +++    L+I V DH+IIG   +VS +   +
Sbjct: 191 EITRQLVSAGRLLDIEVVDHLIIGNGRYVSLRERGL 226


>gi|221135334|ref|ZP_03561637.1| DNA repair protein RadC [Glaciecola sp. HTCC2999]
          Length = 213

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 55/96 (57%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L+  +  +  +    GTI+   VY REIV+  L+ +A ++IL HNHPSG P PS ADI 
Sbjct: 117 LLNNQHEFLHYKELFSGTINAASVYPREIVKYALDYNAANVILAHNHPSGTPEPSQADIA 176

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +TQ I   L+ +++ V DHI++G    VS      +
Sbjct: 177 ITQRIRQALDLIDVQVLDHIVVGAGNAVSLAQRGCL 212


>gi|158929981|gb|ABW82962.1| DNA repair protein [uncultured bacterium pEAF66]
          Length = 224

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N L++ +   RGT+ H  VY RE+V+  L  +A S++L HNHPSG P PS+AD+
Sbjct: 128 LFLDVKNRLLSSQEMFRGTLTHTSVYPREVVKAALARNAASVLLAHNHPSGAPEPSEADL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++++  L  +++ V DH ++      SF     +
Sbjct: 188 ILTRSLVQALALVDVRVLDHFVVAGPHVHSFAEHGQL 224


>gi|88803500|ref|ZP_01119025.1| putative DNA repair protein [Polaribacter irgensii 23-P]
 gi|88780512|gb|EAR11692.1| putative DNA repair protein [Polaribacter irgensii 23-P]
          Length = 228

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N ++A    S+G +    V +R + +R LEL++  II+ HNHPSG   PS AD 
Sbjct: 132 IYLNNSNKVVAKGQISKGGLTATLVDVRLVFKRALELASVGIIVCHNHPSGKLQPSAADK 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L+I + DH+II + A+ SF    ++
Sbjct: 192 QLTLKIKEAGITLDIKLLDHLIITEKAYFSFADEGLL 228


>gi|311277441|ref|YP_003939672.1| DNA repair protein RadC [Enterobacter cloacae SCF1]
 gi|308746636|gb|ADO46388.1| DNA repair protein RadC [Enterobacter cloacae SCF1]
          Length = 221

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++       GT+ HV V+ REIV+  ++ +A ++IL HNHPSG+  PS +D 
Sbjct: 125 IFLDNQNRVLKHTRMFAGTLSHVEVHPREIVREAIKANAAALILAHNHPSGSAAPSRSDR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +I     + I V DH +IG+    SF     I
Sbjct: 185 MVTDKVIKCCQFMEIRVVDHFVIGRGESFSFAEHGWI 221


>gi|289432459|ref|YP_003462332.1| DNA repair protein RadC [Dehalococcoides sp. GT]
 gi|288946179|gb|ADC73876.1| DNA repair protein RadC [Dehalococcoides sp. GT]
          Length = 228

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI     S G+++   V+ RE+ +  L  SA+S+IL HNHPSG+  PS  DI
Sbjct: 132 LMLDVKSRLIRVGHISVGSLEASVVHPREVFKEALSASASSVILAHNHPSGDTEPSHDDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            ++  +      + I V DHIIIG  +F S K   ++
Sbjct: 192 GLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228


>gi|309795803|ref|ZP_07690218.1| DNA repair protein RadC family protein [Escherichia coli MS 145-7]
 gi|308120682|gb|EFO57944.1| DNA repair protein RadC family protein [Escherichia coli MS 145-7]
          Length = 156

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + L+  E+   GT+ H  V+ RE+V+  L+ +A ++IL HNHPSG    S  D 
Sbjct: 61  MYLDNQHCLLEREILFIGTLSHTEVHPREVVKSALKHNAAAVILAHNHPSGTTEISQQDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MTQ I+  L  + + V DH+++G +  +SF  L ++
Sbjct: 121 HMTQRIVKALALVEVRVLDHLVVG-NETISFAELGLL 156


>gi|312961083|ref|ZP_07775588.1| DNA repair protein RadC [Pseudomonas fluorescens WH6]
 gi|311284741|gb|EFQ63317.1| DNA repair protein RadC [Pseudomonas fluorescens WH6]
          Length = 164

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A EV   G+ID   VY R++++R L  +A + I VHNHPSG   PS AD 
Sbjct: 68  IFLDARHRVLAFEVLFHGSIDGASVYPRQVIKRSLVHNAAAAIFVHNHPSGCTEPSQADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  + + V DH I+G+   +S      +
Sbjct: 128 VLTARLKEALALIEVRVLDHFIVGEGRPLSLAEHGWL 164


>gi|254517357|ref|ZP_05129414.1| DNA repair protein RadC [gamma proteobacterium NOR5-3]
 gi|219674195|gb|EED30564.1| DNA repair protein RadC [gamma proteobacterium NOR5-3]
          Length = 177

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL   +  I+ E+Q RG+ID   VY R IV+RCLEL+A ++ILVHNHPSG   PS AD 
Sbjct: 81  LFLTAQHHAISFEIQFRGSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADR 140

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ V DH+I+      SF    ++
Sbjct: 141 QITVRLQRALELIDVRVVDHLIVSAGDATSFAQAGLL 177


>gi|86143951|ref|ZP_01062319.1| putative DNA repair protein [Leeuwenhoekiella blandensis MED217]
 gi|85829658|gb|EAQ48121.1| putative DNA repair protein [Leeuwenhoekiella blandensis MED217]
          Length = 232

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++     S+G +    V +R +++  LE  A S+IL HNHPSG   PS AD 
Sbjct: 136 LYLNNSNKVLHKHQLSKGGMTGTLVDVRLVLKLALERGAVSLILAHNHPSGGLRPSQADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +      L+I V DH+II ++++ SF    ++
Sbjct: 196 DITTKLKVAAASLDIKVLDHLIITENSYFSFADEGLL 232


>gi|307313278|ref|ZP_07592903.1| DNA repair protein RadC [Escherichia coli W]
 gi|306906961|gb|EFN37470.1| DNA repair protein RadC [Escherichia coli W]
 gi|315062961|gb|ADT77288.1| conserved hypothetical protein [Escherichia coli W]
 gi|323376447|gb|ADX48715.1| DNA repair protein RadC [Escherichia coli KO11]
          Length = 156

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + L+  E    GT+ H  V+ RE+V+  L+ +A ++IL HNHPSG    S  D 
Sbjct: 61  MYLDNQHCLLERETLFTGTLSHTEVHPREVVKSALKHNAAAVILAHNHPSGTTEISQQDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I   L  + + V DH+++GK   VSF    ++
Sbjct: 121 YVTQRIAKALALVEVRVLDHLVVGK-EVVSFAECGLL 156


>gi|310658699|ref|YP_003936420.1| DNA repair protein RadC-like protein [Clostridium sticklandii DSM
           519]
 gi|308825477|emb|CBH21515.1| DNA repair protein radC homolog [Clostridium sticklandii]
          Length = 228

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N++I  +  S G+++   V+ RE+    ++ SA  +IL+HNHPSG+P PS  DI
Sbjct: 132 VLLNTKNVIIGSKDISEGSLNASIVHPREVFLEAIKKSANKMILMHNHPSGDPTPSSEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ +I+    + I + DH+IIG   F SFK    I
Sbjct: 192 NITKRLISAGQIVGIEILDHVIIGDGNFYSFKENGQI 228


>gi|46579604|ref|YP_010412.1| DNA repair protein RadC [Desulfovibrio vulgaris str. Hildenborough]
 gi|120602908|ref|YP_967308.1| DNA repair protein RadC [Desulfovibrio vulgaris DP4]
 gi|46449019|gb|AAS95671.1| DNA repair protein RadC [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563137|gb|ABM28881.1| DNA repair protein RadC [Desulfovibrio vulgaris DP4]
 gi|311233408|gb|ADP86262.1| DNA repair protein RadC [Desulfovibrio vulgaris RCH1]
          Length = 225

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 56/96 (58%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD  N LIA E  ++GT++   +Y R++++  L  SA+ IILVHNHP GNP PS  D  
Sbjct: 130 LLDNQNRLIAWERATKGTVNASVIYPRDVLEMALRCSASGIILVHNHPGGNPVPSQPDFE 189

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ +  +   L I + DH+I+  +   S K   ++
Sbjct: 190 VTRQLSRSALTLGIRLLDHVIVTDEDCYSLKEDGLL 225


>gi|332170536|gb|AEE19791.1| DNA repair protein RadC [Krokinobacter diaphorus 4H-3-7-5]
          Length = 237

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N ++  E  S+G +    V +R +++  +ELSA  +IL HNHPSG   PS AD 
Sbjct: 141 LFLNNSNKVLRKEQVSKGGLTGTLVDVRLVMKTAIELSAVGMILGHNHPSGTLKPSQADK 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  + T    L+I V DHII+ +  + SF    I+
Sbjct: 201 LLTAKLKTAAQSLDIQVLDHIIVTEKQYFSFADDGIL 237


>gi|291559003|emb|CBL37803.1| DNA replication and repair protein RadC [butyrate-producing
           bacterium SSC/2]
          Length = 242

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F +  N +I +   S GT++      RE+    L   A S++++HNHPSG+P PS  DI
Sbjct: 146 IFFNGKNKVIKELTVSVGTVNQTVASPRELFLEALRCEAVSVLMIHNHPSGDPTPSRQDI 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +      L I + DHIIIG   ++SF+   ++
Sbjct: 206 LTTKRMKEAGEFLGIPLCDHIIIGDQTYLSFREEHMM 242


>gi|262282816|ref|ZP_06060583.1| DNA repair protein RadC [Streptococcus sp. 2_1_36FAA]
 gi|262261068|gb|EEY79767.1| DNA repair protein RadC [Streptococcus sp. 2_1_36FAA]
          Length = 226

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G++       REI+   ++  ATSIILVHNHPSG   PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSLTRSLAEPREILHYAIKHMATSIILVHNHPSGATRPSRDDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ I      +  ++ DH+I+G D++ S++  
Sbjct: 189 QVTEKIKEACEMMGFVLLDHLIVGGDSYYSYREE 222


>gi|153814880|ref|ZP_01967548.1| hypothetical protein RUMTOR_01095 [Ruminococcus torques ATCC 27756]
 gi|317500393|ref|ZP_07958617.1| DNA repair protein RadC [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089600|ref|ZP_08338499.1| hypothetical protein HMPREF1025_02082 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847911|gb|EDK24829.1| hypothetical protein RUMTOR_01095 [Ruminococcus torques ATCC 27756]
 gi|316898148|gb|EFV20195.1| DNA repair protein RadC [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330404968|gb|EGG84506.1| hypothetical protein HMPREF1025_02082 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 233

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 52/96 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+    LI +   S GTID   V  RE+     + +A  IIL+HNHP G+P PS  D+
Sbjct: 135 IFLNTRCRLIGECNVSEGTIDSALVSPRELFIEAFKRNAYGIILLHNHPGGDPTPSREDV 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ I      L I + DHI+IG + FVS K    
Sbjct: 195 MITRRIYEAGELLGIRLFDHIVIGDNCFVSMKEKGF 230


>gi|311104314|ref|YP_003977167.1| DNA repair protein RadC 1 [Achromobacter xylosoxidans A8]
 gi|310759003|gb|ADP14452.1| DNA repair protein RadC 1 [Achromobacter xylosoxidans A8]
          Length = 164

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R + QR LEL+A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINSTSVYPRVVAQRVLELNAAAVVFSHQHPSGISEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHII+G+ A  SF    ++
Sbjct: 128 MLTQQLQVALALIDVRVLDHIIVGQGAPFSFAESGLL 164


>gi|89098269|ref|ZP_01171154.1| hypothetical protein B14911_10922 [Bacillus sp. NRRL B-14911]
 gi|89087126|gb|EAR66242.1| hypothetical protein B14911_10922 [Bacillus sp. NRRL B-14911]
          Length = 228

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 54/95 (56%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  + LI+ +   +GTID   V+ RE+ +  L  SA  II+ H HPSGN +PS  DI +
Sbjct: 134 LDTKHQLISRKEIYKGTIDAAIVHPREVFRFALNKSAAHIIVAHQHPSGNCSPSRDDIEV 193

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +      + I + DHII+G++ + S K    +
Sbjct: 194 TKRLRKVGEEIGIPLSDHIIVGRNKYFSMKKQGHL 228


>gi|170758657|ref|YP_001788315.1| DNA repair protein RadC [Clostridium botulinum A3 str. Loch Maree]
 gi|229485549|sp|B1KZT0|Y2387_CLOBM RecName: Full=UPF0758 protein CLK_2387
 gi|169405646|gb|ACA54057.1| DNA repair protein, RadC family [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 228

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+        GT++   V+ REI    ++ +  SII+ HNHPSG+P PS  DI
Sbjct: 132 LILNTKNIVTYIRDVFIGTLNSSIVHPREIFCEAIKKNGASIIICHNHPSGDPTPSKEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      + I + DHIIIG++ +VS K    I
Sbjct: 192 NITLRLKKCGKLIGIDLLDHIIIGENKYVSMKEKGTI 228


>gi|257465859|ref|ZP_05630170.1| DNA repair protein radC [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917016|ref|ZP_07913256.1| DNA repair protein radC [Fusobacterium gonidiaformans ATCC 25563]
 gi|313690891|gb|EFS27726.1| DNA repair protein radC [Fusobacterium gonidiaformans ATCC 25563]
          Length = 227

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N L+  E   +G+ID   VY REI+++ L+  A S+I  HNHPSGN  PS  DI
Sbjct: 131 LFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGNTQPSRQDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L   ++++ +HII+ K ++ SF    ++
Sbjct: 191 ALTKEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL 227


>gi|209517442|ref|ZP_03266283.1| DNA repair protein RadC [Burkholderia sp. H160]
 gi|209502096|gb|EEA02111.1| DNA repair protein RadC [Burkholderia sp. H160]
          Length = 283

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  +RG++  + VY REIV+R L  +A S+I+ HNHPSG   PS AD 
Sbjct: 180 LFLDARHRLIRCEESARGSLTRMAVYPREIVRRALAANAASLIVAHNHPSGAVEPSAADC 239

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++TQ +   L  +++ + DH++IG D+  SF     
Sbjct: 240 HLTQTLRDALALVDVQLIDHLVIGADSVYSFARAGW 275


>gi|293374806|ref|ZP_06621110.1| DNA repair protein RadC family protein [Turicibacter sanguinis
           PC909]
 gi|292646564|gb|EFF64570.1| DNA repair protein RadC family protein [Turicibacter sanguinis
           PC909]
          Length = 149

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 47/96 (48%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L+  N      V S GT++   V+ RE+ +  +  +A SI+  HNHPSG   PS  DI 
Sbjct: 54  CLNTKNEPTNISVVSVGTLNKAIVHPREVFKTAILSNAASIMAFHNHPSGETTPSQQDIQ 113

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T  +      L I + DH+IIG   F S K    +
Sbjct: 114 LTNRLYEAGELLGIKLLDHLIIGDGTFTSLKEKGYL 149


>gi|193212294|ref|YP_001998247.1| DNA repair protein RadC [Chlorobaculum parvum NCIB 8327]
 gi|229485546|sp|B3QM94|Y627_CHLP8 RecName: Full=UPF0758 protein Cpar_0627
 gi|193085771|gb|ACF11047.1| DNA repair protein RadC [Chlorobaculum parvum NCIB 8327]
          Length = 222

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +++ E  + GT+    ++ REI +  +  SA SIILVHNHPSG+  PS+AD 
Sbjct: 126 LFLNTKNRILSHESVTVGTLTSSLIHPREIFKAAIRQSAHSIILVHNHPSGDVQPSNADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +  + + L I + DH+I+G D + SF+   ++
Sbjct: 186 QVTSILKKSGDLLQIALLDHVIVGNDDWFSFRDHSLL 222


>gi|257452349|ref|ZP_05617648.1| DNA repair protein radC [Fusobacterium sp. 3_1_5R]
 gi|317058892|ref|ZP_07923377.1| DNA repair protein radC [Fusobacterium sp. 3_1_5R]
 gi|313684568|gb|EFS21403.1| DNA repair protein radC [Fusobacterium sp. 3_1_5R]
          Length = 227

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N L+  E   +G+ID   VY REI+++ L+  A S+I  HNHPSGN  PS  DI
Sbjct: 131 LFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGNTQPSRQDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L   ++++ +HII+ K ++ SF    ++
Sbjct: 191 ALTKEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL 227


>gi|153853159|ref|ZP_01994568.1| hypothetical protein DORLON_00553 [Dorea longicatena DSM 13814]
 gi|149753945|gb|EDM63876.1| hypothetical protein DORLON_00553 [Dorea longicatena DSM 13814]
          Length = 230

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+    L+ +   S+GT++   +  RE+    L+ +A SII++HNHPSG+P PS  D+
Sbjct: 134 LMLNSKAKLLGETNISKGTVNASLITPRELFIEALQKNAVSIIILHNHPSGDPTPSREDM 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ I+     + I + DHIIIG + ++SF+   ++
Sbjct: 194 LTTKRILDAGALIGIDLLDHIIIGNNCYMSFREEGML 230


>gi|78047921|ref|YP_364096.1| RadC family DNA repair protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78036351|emb|CAJ24042.1| RadC family DNA repair protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 164

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  + ++A E   +GTI    V+ R I+QR LEL+A ++I  H HPSG   PS AD 
Sbjct: 68  VFLNNKHEVLAYEPMFKGTIHSATVHARPIMQRALELNAAAVIFSHQHPSGCTEPSSADC 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + T L  +++ V DH+I+G+    SF    ++
Sbjct: 128 AITQTLKTALALIDVRVLDHLIVGQGTPYSFAESDML 164


>gi|15606726|ref|NP_214106.1| DNA repair protein RadC [Aquifex aeolicus VF5]
 gi|6685835|sp|O67541|Y1610_AQUAE RecName: Full=UPF0758 protein aq_1610
 gi|2983952|gb|AAC07500.1| DNA repair protein RadC [Aquifex aeolicus VF5]
          Length = 231

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+  EV + G ++ V    ++I+ + ++LSA  II+ HNHP G P+PS+ D+
Sbjct: 135 LYLDLSNRLLDWEVVAIGNVNTVFSKPKDILFKAVKLSANGIIIAHNHPQGEPSPSNEDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N T+ +      L   + DH+I+ +  + SF+   ++
Sbjct: 195 NFTERLKKACELLGFELLDHLILSEGRYFSFREEGVL 231


>gi|298529740|ref|ZP_07017143.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511176|gb|EFI35079.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1]
          Length = 238

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + +D  N LI  E  SRGT+D  PV+ REI+   LE  A+ +IL+HNHP G+P+PS  D 
Sbjct: 142 IMVDNKNRLIDFEKMSRGTVDQAPVFPREILTVALEKRASGVILLHNHPGGDPHPSFQDR 201

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      L + + DH+II +D+F SF+    +
Sbjct: 202 ELTRKIREVSTALGVRLLDHVIISEDSFFSFQEHGFL 238


>gi|293375077|ref|ZP_06621368.1| DNA repair protein RadC family protein [Turicibacter sanguinis
           PC909]
 gi|292646319|gb|EFF64338.1| DNA repair protein RadC family protein [Turicibacter sanguinis
           PC909]
          Length = 149

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 49/96 (51%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L+  N      + S G+++   V+ RE+ +  +  +A SI+  HNHPSG   PS  DI 
Sbjct: 54  CLNTKNEPTNITLVSVGSLNKAIVHPREVFKTAILSNAASIMAFHNHPSGETTPSQQDIQ 113

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ +      L I + DH+IIG  +F S K    +
Sbjct: 114 LTKRLYEAGELLGIKLLDHLIIGDGSFTSLKEKGYL 149


>gi|257481766|ref|ZP_05635807.1| DNA repair protein RadC [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 219

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/91 (38%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 128 LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ +   L  +++ V DH+I+G    +S 
Sbjct: 188 DLTKRLKEALMLVDVHVLDHVIVGDGEPLSM 218


>gi|242278123|ref|YP_002990252.1| DNA repair protein RadC [Desulfovibrio salexigens DSM 2638]
 gi|242121017|gb|ACS78713.1| DNA repair protein RadC [Desulfovibrio salexigens DSM 2638]
          Length = 225

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 50/94 (53%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           +  N +I  E  S GT+D   VY RE+V   L  +A+ +IL HNHP G+P+PS  D   T
Sbjct: 132 NNRNKVICWERLSEGTVDKTAVYPREVVALALRHNASGVILTHNHPGGDPSPSPEDTERT 191

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             I      + I + DH+I+  D F SFK    +
Sbjct: 192 MEIAALCQDMEIRLLDHVIVTADRFHSFKEAGYL 225


>gi|169335849|ref|ZP_02863042.1| hypothetical protein ANASTE_02275 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258587|gb|EDS72553.1| hypothetical protein ANASTE_02275 [Anaerofustis stercorihominis DSM
           17244]
          Length = 224

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N++I  E+ S GTI+   V++RE+ +  ++ +A SIIL HNHPSG+  PS  D 
Sbjct: 128 ILLNTKNMVIETELISIGTINTSLVHVREVFRNAIKKNANSIILAHNHPSGDSTPSIEDE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I V DH+IIGKD + SF    ++
Sbjct: 188 HLTKRLKDAGELIGIKVIDHVIIGKDNYFSFMEENML 224


>gi|238791279|ref|ZP_04634918.1| DNA repair protein [Yersinia intermedia ATCC 29909]
 gi|238729412|gb|EEQ20927.1| DNA repair protein [Yersinia intermedia ATCC 29909]
          Length = 152

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + ++A E   RGT++ V +Y REIV+  L  +A +IILVHNHPSG P PS AD 
Sbjct: 56  LLLDNQHRILAYEELFRGTLNAVSIYPREIVKLSLRYNAGAIILVHNHPSGEPEPSHADK 115

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  + + L  L++ V DH+I+     VS     ++
Sbjct: 116 EITNKLKSVLGLLDVQVLDHLIVAGTQVVSLAERGLV 152


>gi|298528608|ref|ZP_07016012.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1]
 gi|298512260|gb|EFI36162.1| DNA repair protein RadC [Desulfonatronospira thiodismutans ASO3-1]
          Length = 143

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 2   FL-DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           FL D  N  ++ ++ S+GT+D  PV+ REI++  L   A+ +IL HNHP G+PNPS  D 
Sbjct: 47  FLVDNKNHFLSKKLISKGTVDQAPVFPREILRYALLKQASGLILSHNHPGGDPNPSVQDR 106

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      L I + DH+I+ +    SF+   ++
Sbjct: 107 EMTARIKKAAILLGIRLLDHVIVSRTGHYSFQEHGLL 143


>gi|153940602|ref|YP_001392279.1| DNA repair protein RadC [Clostridium botulinum F str. Langeland]
 gi|166218778|sp|A7GHL9|Y3057_CLOBL RecName: Full=UPF0758 protein CLI_3057
 gi|152936498|gb|ABS41996.1| DNA repair protein, RadC family [Clostridium botulinum F str.
           Langeland]
 gi|295320272|gb|ADG00650.1| DNA repair protein, RadC family [Clostridium botulinum F str.
           230613]
          Length = 228

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+        GT++   V+ REI    ++ +  SII+ HNHPSG+P PS  DI
Sbjct: 132 LILNTKNIVKYIRDVFIGTLNSSIVHPREIFCEAIKKNGASIIICHNHPSGDPTPSKEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      + I + DHIIIG++ +VS K    I
Sbjct: 192 NITLRLKECGKLIGIDLLDHIIIGENKYVSMKEKGTI 228


>gi|28189070|dbj|BAC56220.1| putative DNA repair protein [Streptococcus suis]
          Length = 226

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 56/94 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I+ +    G+++      REI+   ++  ATSII+VHNHPSG+  PS  D+
Sbjct: 129 LYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+N+  +   L +++ DH+I+G   + SF+  
Sbjct: 189 LFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222


>gi|224370717|ref|YP_002604881.1| RadC3 [Desulfobacterium autotrophicum HRM2]
 gi|223693434|gb|ACN16717.1| RadC3 [Desulfobacterium autotrophicum HRM2]
          Length = 279

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++A E+   G++    VY RE++ + LE  A ++I  HNHPSG  +PS  D+
Sbjct: 171 IFLDAKNRVLASEILFEGSLSSSAVYPREVIAKALEHRAAALIFAHNHPSGETSPSPEDL 230

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L    I VH+H+I G + F SF    II
Sbjct: 231 AITRRLFFALAHAGITVHEHLITGGERFYSFADQGII 267


>gi|225011591|ref|ZP_03702029.1| DNA repair protein RadC [Flavobacteria bacterium MS024-2A]
 gi|225004094|gb|EEG42066.1| DNA repair protein RadC [Flavobacteria bacterium MS024-2A]
          Length = 232

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N L+     S+G I    V +R   +R  E+ AT +IL HNHPSG   PS +D 
Sbjct: 136 LYLNQSNRLLEKYRLSKGGITQTTVDLRLAFKRAFEVGATGLILAHNHPSGGLTPSSSDE 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+        +++ + DH+I+ K  + SF    ++
Sbjct: 196 QITRKFKLAAASVDLRILDHLIVSKKGYFSFADEGLL 232


>gi|15644305|ref|NP_229357.1| DNA repair protein RadC [Thermotoga maritima MSB8]
 gi|6685843|sp|Q9X1P3|Y1557_THEMA RecName: Full=UPF0758 protein TM_1557
 gi|4982124|gb|AAD36623.1|AE001801_10 DNA repair protein [Thermotoga maritima MSB8]
          Length = 222

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 52/95 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    +I +   + GT D   ++ R++ +  +  +A+ +I+VHNHPSG+P PS  D 
Sbjct: 126 ICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPTPSKEDR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +      L + + DH+I+ +  + SF+   
Sbjct: 186 LITERLKQAGEILGVSLVDHVIVSRRGYFSFREEG 220


>gi|108804367|ref|YP_644304.1| DNA repair protein RadC [Rubrobacter xylanophilus DSM 9941]
 gi|122975977|sp|Q1AVT6|Y1530_RUBXD RecName: Full=UPF0758 protein Rxyl_1530
 gi|108765610|gb|ABG04492.1| DNA repair protein RadC [Rubrobacter xylanophilus DSM 9941]
          Length = 227

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I     S GT+    V+ RE+ +  +  SA S++L HNHPSG   PS  D 
Sbjct: 132 VLLNTKNEVIEAPTISVGTLSSSLVHPREVFKPAIRASAASVVLAHNHPSGRVEPSREDR 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      + I V DH+I+G + + S K   ++
Sbjct: 192 EVTGRVAEAGGIIGIEVLDHVIVG-EGYFSMKEHGML 227


>gi|229552057|ref|ZP_04440782.1| DNA repair protein RadC [Lactobacillus rhamnosus LMS2-1]
 gi|229314574|gb|EEN80547.1| DNA repair protein RadC [Lactobacillus rhamnosus LMS2-1]
          Length = 236

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/92 (40%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I +++ + GT+D      R + +  L+LSAT++I+VHNHPSG+P+PS AD 
Sbjct: 138 LFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADR 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + T         L + + DH+IIG+ ++ SF 
Sbjct: 198 DTTTRFQLAAALLGMHLLDHLIIGRQSYYSFA 229


>gi|78042658|ref|YP_359204.1| DNA repair protein RadC [Carboxydothermus hydrogenoformans Z-2901]
 gi|123577004|sp|Q3AF80|Y341_CARHZ RecName: Full=UPF0758 protein CHY_0341
 gi|77994773|gb|ABB13672.1| DNA repair protein RadC [Carboxydothermus hydrogenoformans Z-2901]
          Length = 226

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N L  + + + G ++H  V   +I +  +++ A ++I+ HNHPSG+P PS  DI
Sbjct: 130 LYLNTKNQLCGENIVAIGGVNHAGVSPGDIFREAVKIGAYAVIIAHNHPSGDPTPSKEDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           + T  +      L I + DHII+G++ ++S K  R+
Sbjct: 190 DFTGRVKKASEILGIKLLDHIILGENKYISMKAERL 225


>gi|154253862|ref|YP_001414686.1| DNA repair protein RadC [Parvibaculum lavamentivorans DS-1]
 gi|154157812|gb|ABS65029.1| DNA repair protein RadC [Parvibaculum lavamentivorans DS-1]
          Length = 164

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  + ++A E   RGTI+   V+ R IVQR LEL+A ++IL H HPSG   PS AD 
Sbjct: 68  VFMDSLHQVLAYEPMFRGTINSATVHARVIVQRALELNAAAVILSHQHPSGATEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHII+G+    SF    ++
Sbjct: 128 ALTQQLQAALALIDVRVLDHIIVGQGIPYSFAEHGLL 164


>gi|295094836|emb|CBK83927.1| DNA replication and repair protein RadC [Coprococcus sp. ART55/1]
          Length = 242

 Score =  121 bits (305), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  D  + LI D   S GT++   +  RE+    L   A  IILVHNHPSG+P PS  DI
Sbjct: 146 LMFDAKHKLIKDVRISEGTVNSSMLSPREVFVEALRYDAVYIILVHNHPSGDPTPSGQDI 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DHII+G + +VS     I+
Sbjct: 206 DITREMDRAGELIGIELSDHIILGNNCYVSLAERGIL 242


>gi|253751831|ref|YP_003024972.1| DNA repair protein RadC [Streptococcus suis SC84]
 gi|253753654|ref|YP_003026795.1| DNA repair protein RadC [Streptococcus suis P1/7]
 gi|253755465|ref|YP_003028605.1| DNA repair protein RadC [Streptococcus suis BM407]
 gi|18253151|dbj|BAB83962.1| putative DNA repair protein [Streptococcus suis]
 gi|251816120|emb|CAZ51743.1| DNA repair protein RadC [Streptococcus suis SC84]
 gi|251817929|emb|CAZ55707.1| DNA repair protein RadC [Streptococcus suis BM407]
 gi|251819900|emb|CAR45944.1| DNA repair protein RadC [Streptococcus suis P1/7]
 gi|292558401|gb|ADE31402.1| putative DNA repair protein [Streptococcus suis GZ1]
 gi|319758183|gb|ADV70125.1| DNA repair protein RadC [Streptococcus suis JS14]
          Length = 226

 Score =  121 bits (305), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 56/94 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I+ +    G+++      REI+   ++  ATSII+VHNHPSG+  PS  D+
Sbjct: 129 LYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+N+  +   L +++ DH+I+G   + SF+  
Sbjct: 189 LFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222


>gi|148270365|ref|YP_001244825.1| DNA repair protein RadC [Thermotoga petrophila RKU-1]
 gi|281412671|ref|YP_003346750.1| DNA repair protein RadC [Thermotoga naphthophila RKU-10]
 gi|166218798|sp|A5IM26|Y1235_THEP1 RecName: Full=UPF0758 protein Tpet_1235
 gi|147735909|gb|ABQ47249.1| DNA repair protein RadC [Thermotoga petrophila RKU-1]
 gi|281373774|gb|ADA67336.1| DNA repair protein RadC [Thermotoga naphthophila RKU-10]
          Length = 222

 Score =  121 bits (305), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 52/95 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    +I +   + GT D   ++ R++ +  +  +A+ +I+VHNHPSG+P PS  D 
Sbjct: 126 ICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPTPSKEDR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +      L + + DH+I+ +  + SF+   
Sbjct: 186 LITERLKQAGEILGVSLVDHVIVSRRGYFSFREEG 220


>gi|70726267|ref|YP_253181.1| hypothetical protein SH1266 [Staphylococcus haemolyticus JCSC1435]
 gi|123660411|sp|Q4L700|Y1266_STAHJ RecName: Full=UPF0758 protein SH1266
 gi|68446991|dbj|BAE04575.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 228

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 52/96 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+I +E   +GT++   ++ RE+ +  +  S+ +II++HNHPSG+  PS  DI
Sbjct: 128 LLLNSKNIVIKEETIYKGTLNSSVIHPREVFKAAIRASSNAIIVLHNHPSGDVTPSKEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I V DHIIIG   + S      
Sbjct: 188 ETTIRLKECGELLGIQVLDHIIIGDQKYASLVEEGY 223


>gi|28189083|dbj|BAC56230.1| putative DNA repair protein [Streptococcus suis]
          Length = 226

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 56/94 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  E    G+++      REI+   ++  ATS+I+VHNHPSG+ +PS  D+
Sbjct: 129 LYLNTQNQIIKQETIFIGSVNRSIAEPREILHHAIKCMATSVIIVHNHPSGSVHPSKNDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+N+  +   L +++ DH+I+G   + SF+  
Sbjct: 189 LFTENLKQSCEVLGLVLLDHLIVGNKNYYSFREE 222


>gi|260881538|ref|ZP_05404673.2| DNA repair protein RadC [Mitsuokella multacida DSM 20544]
 gi|260848721|gb|EEX68728.1| DNA repair protein RadC [Mitsuokella multacida DSM 20544]
          Length = 226

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N ++     S G++    V+ RE+    +  +A S+ILVHNHPSG+PNPS  D+
Sbjct: 129 LLLNTKNHILGLRDVSIGSLSASVVHPREVFAMAIRYAAASMILVHNHPSGDPNPSREDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++     L+I V DHII+G + F+S K   +I
Sbjct: 189 AITDRLVKAGRILDIPVLDHIILGDNRFLSLKEKGMI 225


>gi|28189075|dbj|BAC56224.1| putative DNA repair protein [Streptococcus suis]
          Length = 226

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 56/94 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  E    G+++      REI+   ++  ATS+I+VHNHPSG+ +PS  D+
Sbjct: 129 LYLNTQNQIIKQETIFIGSVNRSIAEPREILHHAIKCMATSVIIVHNHPSGSVHPSKNDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+N+  +   L +++ DH+I+G   + SF+  
Sbjct: 189 LFTENLKQSCEVLGLVLLDHLIVGNKNYYSFREE 222


>gi|170289009|ref|YP_001739247.1| DNA repair protein RadC [Thermotoga sp. RQ2]
 gi|170176512|gb|ACB09564.1| DNA repair protein RadC [Thermotoga sp. RQ2]
          Length = 215

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 52/95 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    +I +   + GT D   ++ R++ +  +  +A+ +I+VHNHPSG+P PS  D 
Sbjct: 119 ICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPTPSKEDR 178

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +      L + + DH+I+ +  + SF+   
Sbjct: 179 LITERLKQAGEILGVSLVDHVIVSRRGYFSFREEG 213


>gi|28189079|dbj|BAC56227.1| putative DNA repair protein [Streptococcus suis]
          Length = 226

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 56/94 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  E    G+++      REI+   ++  ATS+I+VHNHPSG+ +PS  D+
Sbjct: 129 LYLNTQNQIIKQETIFIGSVNRSIAEPREILHHAIKCMATSVIIVHNHPSGSVHPSKNDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+N+  +   L +++ DH+I+G   + SF+  
Sbjct: 189 LFTENLKQSCEVLGLVLLDHLIVGNKNYYSFREE 222


>gi|297618163|ref|YP_003703322.1| DNA repair protein RadC [Syntrophothermus lipocalidus DSM 12680]
 gi|297146000|gb|ADI02757.1| DNA repair protein RadC [Syntrophothermus lipocalidus DSM 12680]
          Length = 166

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N + A +V S G++    V+ RE+ +  +  S+ S+I +HNHPSG+P PS  DI
Sbjct: 70  LYLNSGNQVTAAQVVSIGSLSSTVVHPREVFKTAILTSSMSVIAIHNHPSGDPEPSSEDI 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L I V DHI+IG   F S +G++ I
Sbjct: 130 AVTKQLVEAGKILGIKVLDHIVIGNKRFWSMRGMKQI 166


>gi|254518121|ref|ZP_05130177.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA]
 gi|226911870|gb|EEH97071.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA]
          Length = 152

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N   +    S G+++   V+ RE+ +  +  ++ +II+ HNHPSG+  PS  DI
Sbjct: 55  VCLDNKNQPTSINTVSVGSLNSSIVHPREVFKVAILSNSANIIVYHNHPSGDVTPSKEDI 114

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKD-AFVSFKGLR 95
           N+T+ +      L I + DHII+G + ++ SFK   
Sbjct: 115 NITERLKEAGKILGIELIDHIIVGSNSSYYSFKEKG 150


>gi|256819754|ref|YP_003141033.1| DNA repair protein RadC [Capnocytophaga ochracea DSM 7271]
 gi|256581337|gb|ACU92472.1| DNA repair protein RadC [Capnocytophaga ochracea DSM 7271]
          Length = 225

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G I H  V +R + +  LE  A ++ILVHNHPSG+  PS  DI
Sbjct: 129 LYLNSTNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGSTTPSKEDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +TQ + T    L+I + DH+I+ +  ++SF   R+
Sbjct: 189 ELTQRVKTAGEMLDIKLLDHVIVTEKEYLSFLDERL 224


>gi|237747755|ref|ZP_04578235.1| DNA repair protein radC [Oxalobacter formigenes OXCC13]
 gi|229379117|gb|EEO29208.1| DNA repair protein radC [Oxalobacter formigenes OXCC13]
          Length = 224

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI      RGT+    VY RE+V+  L  ++ S+I  HNHPSG  +PS+AD 
Sbjct: 128 LHLDIKNKLIECSEMFRGTLSQTSVYPREVVKAALANNSASVIFAHNHPSGKADPSNADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  ++I V DHII+      SF     +
Sbjct: 188 TLTHALKQALGLVDIRVLDHIIVAGKNTYSFAEYGFL 224


>gi|222142629|ref|YP_002559384.1| hypothetical protein MCCL_plsB0053 [Macrococcus caseolyticus
           JCSC5402]
 gi|222121398|dbj|BAH18731.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 150

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 47/94 (50%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +        GTI+  P++ RE+ Q  +  S  SIIL H HPS +P PS  D   
Sbjct: 56  LNTKNEITFVYTVFIGTINMSPIHPREVFQVAILNSCASIILAHCHPSDDPTPSSEDREA 115

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           T+        L I V DHII+ + ++ SF+   +
Sbjct: 116 TKRFEECGELLGIPVLDHIIVTESSYFSFRENNL 149


>gi|107102082|ref|ZP_01366000.1| hypothetical protein PaerPA_01003131 [Pseudomonas aeruginosa PACS2]
 gi|134095214|ref|YP_001100289.1| RadC family DNA repair protein [Herminiimonas arsenicoxydans]
 gi|133739117|emb|CAL62166.1| putative DNA repair protein RadC [Herminiimonas arsenicoxydans]
          Length = 164

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E   RGTI+   VY R +VQR LEL A +++  H HPSG   PS AD 
Sbjct: 68  VFLDSMHQVLAYEPMFRGTINSTAVYPRVVVQRVLELKAAAVVFAHQHPSGVTEPSSADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHII+G+    SF    ++
Sbjct: 128 ALTQQLQAALALIDVRVLDHIIVGQGIPYSFAEHSLL 164


>gi|330971404|gb|EGH71470.1| DNA repair protein RadC [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 162

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  +  ++ E    G+ID   VY REIV R L  +A ++I  HNHPSG   PS AD 
Sbjct: 66  VCLDARHRTLSFEKVFFGSIDSASVYPREIVIRALACNAAAVIFAHNHPSGCAEPSQADR 125

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +   L  + + V DH ++G+   VS   +  +
Sbjct: 126 NLTAQLKNALALVEVRVLDHFVVGEGKPVSLAEMGWL 162


>gi|291546142|emb|CBL19250.1| DNA replication and repair protein RadC [Ruminococcus sp. SR1/5]
          Length = 235

 Score =  121 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 60/96 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD HN L  +++ SRGT++   +  RE+    ++  A ++ILVHNHP G+P+PS AD+
Sbjct: 135 MMLDGHNHLSGEQLLSRGTVNATLITPREVFVEAVKYRAVNLILVHNHPGGDPSPSQADL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ I      L I + DHIIIG   +VSF+   I
Sbjct: 195 DVTERIYHCGELLGIHLLDHIIIGDHRYVSFREKGI 230


>gi|225419747|ref|ZP_03762050.1| hypothetical protein CLOSTASPAR_06085 [Clostridium asparagiforme
           DSM 15981]
 gi|225041614|gb|EEG51860.1| hypothetical protein CLOSTASPAR_06085 [Clostridium asparagiforme
           DSM 15981]
          Length = 231

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    L+ D + SRGT++   +  RE++   L   A +++LVHNHPSG+P PS  DI
Sbjct: 135 MFLDTKQALLKDVLLSRGTVNASVLSPREVLIEALRCRAVTMVLVHNHPSGDPTPSREDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ I      + I + DHI+IG   ++SF+   ++
Sbjct: 195 NLTRRICEAGGLVGIPLIDHIVIGDLRYLSFREQNLL 231


>gi|33152085|ref|NP_873438.1| DNA repair protein [Haemophilus ducreyi 35000HP]
 gi|33148307|gb|AAP95827.1| conserved possible DNA repair protein [Haemophilus ducreyi 35000HP]
          Length = 157

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF D  N LI  E    GTI+   ++ REIV++ LEL+++++IL HNHPSG   PS +D 
Sbjct: 61  LFWDTQNRLIRFEKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  I      +++ V DHII+      SF   +++
Sbjct: 121 QTTAKIKQACQLIDVNVLDHIIVSATDTYSFCMHQLM 157


>gi|119897428|ref|YP_932641.1| DNA repair protein RadC [Azoarcus sp. BH72]
 gi|166218773|sp|A1K4J9|Y1137_AZOSB RecName: Full=UPF0758 protein azo1137
 gi|119669841|emb|CAL93754.1| DNA repair protein radC homolog [Azoarcus sp. BH72]
          Length = 225

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI      RGT+    VY RE+V+  L+ +A ++I  HNHPSG   PS AD 
Sbjct: 128 LLLDARNTLIDAVDLFRGTLTQTSVYPREVVKLALDRNAAAVIFAHNHPSGAAEPSSADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97
            +T+++   L  ++I V DH ++       SF    +I
Sbjct: 188 QLTRHLKDALALVDIRVLDHFVVPAHGKPTSFAERGLI 225


>gi|225010502|ref|ZP_03700973.1| DNA repair protein RadC [Flavobacteria bacterium MS024-3C]
 gi|225005331|gb|EEG43282.1| DNA repair protein RadC [Flavobacteria bacterium MS024-3C]
          Length = 231

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N+LI   +  +G      V IR ++Q+ +   AT++I+ HNHP+GN  PS +D 
Sbjct: 135 LYLDNSNVLIERSLLGKGGFTATVVDIRLVLQQAIRWGATAMIVAHNHPTGNLKPSHSDK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      L+I + DHII+GK+ + SF    ++
Sbjct: 195 ALTQKLKEAAKVLDIKLLDHIIVGKNEYFSFADQNLL 231


>gi|182419744|ref|ZP_02950984.1| DNA repair protein [Clostridium butyricum 5521]
 gi|237666375|ref|ZP_04526360.1| DNA repair protein RadC [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376292|gb|EDT73874.1| DNA repair protein [Clostridium butyricum 5521]
 gi|237657574|gb|EEP55129.1| DNA repair protein RadC [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 229

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 55/95 (57%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L   N +I  +    G++++  V+ REI +R +   + S+I+ HNHPSG+P PS  DIN+
Sbjct: 135 LSTKNTIIDAKDVFIGSLNNSIVHPREIFKRAITSHSASVIICHNHPSGDPTPSREDINI 194

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T  I      + I + DHIIIG + FVS K   +I
Sbjct: 195 TLRIKECGKIIGIPLIDHIIIGNNTFVSLKEKGLI 229


>gi|223932335|ref|ZP_03624338.1| DNA repair protein RadC [Streptococcus suis 89/1591]
 gi|302023854|ref|ZP_07249065.1| DNA repair protein RadC [Streptococcus suis 05HAS68]
 gi|28189065|dbj|BAC56216.1| putative DNA repair protein [Streptococcus suis]
 gi|223899016|gb|EEF65374.1| DNA repair protein RadC [Streptococcus suis 89/1591]
          Length = 226

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 56/94 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I+ +    G+++      REI+   ++  ATSII+VHNHPSG+  PS  D+
Sbjct: 129 LYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+N+  +   L +++ DH+I+G   + SF+  
Sbjct: 189 LFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222


>gi|269926735|ref|YP_003323358.1| DNA repair protein RadC [Thermobaculum terrenum ATCC BAA-798]
 gi|269790395|gb|ACZ42536.1| DNA repair protein RadC [Thermobaculum terrenum ATCC BAA-798]
          Length = 234

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 55/94 (58%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N ++A     +G ++   +   ++ +  +  +A SIIL HNHPSG+P PS  D+  
Sbjct: 138 LNTKNQILAITEVYKGGLNSALIRPADVFKPAVRNNAASIILAHNHPSGDPTPSSEDVRT 197

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           T+++I     L+I V DHII+G++++ S +   +
Sbjct: 198 TESLIEAGKLLDIEVLDHIIVGRNSYTSMRRRHL 231


>gi|254520230|ref|ZP_05132286.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA]
 gi|226913979|gb|EEH99180.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA]
          Length = 229

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +I  +   +G+++   V+ REI +  L+ S++SII+ HNHPSG+P PS  DI
Sbjct: 133 IMLDTKNNIIGIKDVFKGSLNTSIVHPREIFKEALKKSSSSIIICHNHPSGDPTPSKEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      + + + DH+IIGK  FVS K   II
Sbjct: 193 NITLRLKECSKIIGVDLLDHLIIGKGKFVSLKEKGII 229


>gi|119503524|ref|ZP_01625607.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2080]
 gi|119460586|gb|EAW41678.1| DNA repair protein RadC [marine gamma proteobacterium HTCC2080]
          Length = 223

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 56/96 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    L+A      GT++  PVY REIV   L++ A++II+ HNHPSG   PS ADI
Sbjct: 124 LFLDTQRQLLACRDMFFGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCLAPSVADI 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T  +   L  ++I + DH+I+ +  ++S     +
Sbjct: 184 QLTDRLRRALGLIDIDLLDHLIVAQGRYLSMASEGL 219


>gi|73748411|ref|YP_307650.1| RadC family DNA repair protein [Dehalococcoides sp. CBDB1]
 gi|73660127|emb|CAI82734.1| DNA repair protein, RadC family [Dehalococcoides sp. CBDB1]
          Length = 219

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI     S G+++   V+ RE+ +  L  SA  +IL HNHPSG+  PS  DI
Sbjct: 123 LMLDVKSRLIRVGHISVGSLEASVVHPREVFKEALSASAAFVILAHNHPSGDTEPSHDDI 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            ++  +      + I V DHIIIG  +F S K   ++
Sbjct: 183 GLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 219


>gi|239828412|ref|YP_002951036.1| DNA repair protein RadC [Geobacillus sp. WCH70]
 gi|239808705|gb|ACS25770.1| DNA repair protein RadC [Geobacillus sp. WCH70]
          Length = 169

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N   A  +   G+++   V+ RE+ +  +  ++ SII+ HNHPS +P PS  DI
Sbjct: 73  VCLDTKNQPTAINICHIGSLNSSIVHPREVFKSAILSNSASIIVAHNHPSSDPTPSREDI 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I + DH+I+ ++ FVS K    I
Sbjct: 133 EVTKRLVEAGRIVGIELLDHLIVCEEKFVSLKEKGYI 169


>gi|325842730|ref|ZP_08167765.1| putative DNA repair protein RadC [Turicibacter sp. HGF1]
 gi|325489530|gb|EGC91895.1| putative DNA repair protein RadC [Turicibacter sp. HGF1]
          Length = 149

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 51/96 (53%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L+  N      V S G+++   V+ RE+ +  +  +A SII  HNHPSG   PSD DI 
Sbjct: 54  CLNTKNEPTNITVVSVGSLNKAIVHPREVFKTAILSNAASIIAFHNHPSGETTPSDQDIQ 113

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T  ++     L I + DH+IIG  +F+S K    +
Sbjct: 114 LTHRLVEAGELLGIKLLDHLIIGDGSFMSLKEKGYL 149


>gi|167630773|ref|YP_001681272.1| DNA repair protein radc [Heliobacterium modesticaldum Ice1]
 gi|167593513|gb|ABZ85261.1| DNA repair protein radc [Heliobacterium modesticaldum Ice1]
          Length = 223

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 56/95 (58%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +++ E  S G++    V+ RE+ +  +  SA +++L+HNHPSG+P PS  D  +
Sbjct: 129 LNTKNQVLSIEDISVGSLSSSIVHPRELFKVLIRKSAAAVVLIHNHPSGDPTPSREDREI 188

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ I+     L I + DH+IIG + + S K L  +
Sbjct: 189 TRRIVEAGRILGIEILDHVIIGDNRYSSLKELGYV 223


>gi|169825547|ref|YP_001695722.1| DNA repair protein radC-like protein [Lysinibacillus sphaericus
           C3-41]
 gi|168994824|gb|ACA42363.1| DNA repair protein radC-like protein [Lysinibacillus sphaericus
           C3-41]
          Length = 204

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  E    G+++      REI++  L+ SA  II +HNH SG+  PS  D+
Sbjct: 108 LFLDTRSRVIKKETIFIGSLNSSIASPREIMRLALKYSAAGIICLHNHCSGDSEPSMQDL 167

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    + + + + DHI+IG + F S +   ++
Sbjct: 168 EVTRRLFEAGDLMGVELIDHIVIGNNEFTSIRENNLL 204


>gi|304395596|ref|ZP_07377479.1| DNA repair protein RadC [Pantoea sp. aB]
 gi|304356890|gb|EFM21254.1| DNA repair protein RadC [Pantoea sp. aB]
          Length = 155

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N L+A E    G+I    ++ RE+V+  L  +A + I  HNHPSG   PSDAD 
Sbjct: 59  VFLDNQNRLLAHETLFHGSITSTEIHPREVVKAALRHNAAAAIFAHNHPSGYAEPSDADR 118

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  + + V DH+I+G    VSF     +
Sbjct: 119 RITERLKNALALVEVRVLDHLIVGSKEIVSFAERGWL 155


>gi|219847704|ref|YP_002462137.1| DNA repair protein RadC [Chloroflexus aggregans DSM 9485]
 gi|254764430|sp|B8G568|Y777_CHLAD RecName: Full=UPF0758 protein Cagg_0777
 gi|219541963|gb|ACL23701.1| DNA repair protein RadC [Chloroflexus aggregans DSM 9485]
          Length = 229

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + +        G+++   + I E+ +  +  ++ +II+VHNHPSG   PS  DI
Sbjct: 131 VLLDTKHRVQQINTVYIGSLNSATIRIGEVFKEAVRRNSAAIIVVHNHPSGEATPSPEDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ ++     L+I V DH+IIG+  +VS +   I
Sbjct: 191 QVTRQLVAAGRLLDIEVLDHLIIGRGQYVSLRERGI 226


>gi|260061882|ref|YP_003194962.1| putative DNA repair protein [Robiginitalea biformata HTCC2501]
 gi|88786015|gb|EAR17184.1| putative DNA repair protein [Robiginitalea biformata HTCC2501]
          Length = 242

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +++    S+G +    V +R ++++ LEL A S++L HNHPSGN  PS AD 
Sbjct: 146 LYLNNANGVLSRFQLSKGGLTGTLVDVRLLLRKALELHAVSLVLAHNHPSGNLQPSKADR 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      ++I V DH+I+G  A+ SF   +++
Sbjct: 206 QITRKIEKAARSMDIRVLDHLILGGTAYFSFADEQLL 242


>gi|90408646|ref|ZP_01216799.1| DNA repair protein RadC [Psychromonas sp. CNPT3]
 gi|90310253|gb|EAS38385.1| DNA repair protein RadC [Psychromonas sp. CNPT3]
          Length = 157

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 63/97 (64%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  + LI  +    GTID   +Y RE+++  L+L+A+++IL HNHPSG+  PSDADI
Sbjct: 62  MFLNSRHQLIEYKEIFHGTIDSAHIYPREMLKAVLKLNASTVILAHNHPSGSSVPSDADI 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DH+I+G+ A  SF    ++
Sbjct: 122 AITQRLTKALELIDVRVLDHVIVGETA-TSFAEKGLL 157


>gi|146320931|ref|YP_001200642.1| DNA repair protein RadC [Streptococcus suis 98HAH33]
 gi|229485571|sp|A4W1K3|Y1084_STRS2 RecName: Full=UPF0758 protein SSU98_1084
 gi|145691737|gb|ABP92242.1| putative DNA repair protein [Streptococcus suis 98HAH33]
          Length = 246

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 56/94 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I+ +    G+++      REI+   ++  ATSII+VHNHPSG+  PS  D+
Sbjct: 129 LYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+N+  +   L +++ DH+I+G   + SF+  
Sbjct: 189 LFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222


>gi|170693582|ref|ZP_02884740.1| DNA repair protein RadC [Burkholderia graminis C4D1M]
 gi|170141364|gb|EDT09534.1| DNA repair protein RadC [Burkholderia graminis C4D1M]
          Length = 254

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 60/96 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  +RGT+  + VY REIV+R L L+A S+I+ HNHPSG   PS +D 
Sbjct: 158 LFLDARHRLIRSEESARGTLTRMAVYPREIVRRALALNAASLIVAHNHPSGAVQPSASDC 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ +   L  +++ + DH++IG D+  SF     
Sbjct: 218 SLTRTLREALALIDVQLVDHLVIGADSVYSFARAGW 253


>gi|296313679|ref|ZP_06863620.1| DNA repair protein RadC [Neisseria polysaccharea ATCC 43768]
 gi|296839740|gb|EFH23678.1| DNA repair protein RadC [Neisseria polysaccharea ATCC 43768]
          Length = 225

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVTENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSRSVCSFRQLGLM 224


>gi|160871642|ref|ZP_02061774.1| DNA repair protein RadC [Rickettsiella grylli]
 gi|159120441|gb|EDP45779.1| DNA repair protein RadC [Rickettsiella grylli]
          Length = 224

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  I  +    G+I+   VY RE++++  + +A ++IL HNHPSGN  PSDAD 
Sbjct: 128 LFLDNTHRFIFFKELFHGSINEATVYPRELIRQVYQHNAAAVILAHNHPSGNAKPSDADK 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I T L  +++ + DHIIIG     SF    ++
Sbjct: 188 RLTQEIKTILTAIDVRLLDHIIIGSGCITSFAAQGLL 224


>gi|258508259|ref|YP_003171010.1| DNA repair protein radC [Lactobacillus rhamnosus GG]
 gi|258539471|ref|YP_003173970.1| DNA repair protein radC [Lactobacillus rhamnosus Lc 705]
 gi|257148186|emb|CAR87159.1| DNA repair protein radC [Lactobacillus rhamnosus GG]
 gi|257151147|emb|CAR90119.1| DNA repair protein radC [Lactobacillus rhamnosus Lc 705]
 gi|259649577|dbj|BAI41739.1| DNA repair protein [Lactobacillus rhamnosus GG]
          Length = 222

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/92 (40%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I +++ + GT+D      R + +  L+LSAT++I+VHNHPSG+P+PS AD 
Sbjct: 124 LFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + T         L + + DH+IIG+ ++ SF 
Sbjct: 184 DTTTRFQLAAALLGMHLLDHLIIGRQSYYSFA 215


>gi|295397226|ref|ZP_06807325.1| DNA repair protein RadC [Aerococcus viridans ATCC 11563]
 gi|294974535|gb|EFG50263.1| DNA repair protein RadC [Aerococcus viridans ATCC 11563]
          Length = 241

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++ ++    G+++    + REI +  +  SA  II+ HNHPSGNP+PS ADI
Sbjct: 144 LYLNTKNQIVKEKTIFVGSLNASVAHPREIFKEGVRASAARIIVAHNHPSGNPSPSQADI 203

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           N T+ +    + + I + DHII+G DAF+S +   I
Sbjct: 204 NFTRRLAEVGDLIGIEILDHIIVGGDAFLSLQEYGI 239


>gi|260890567|ref|ZP_05901830.1| DNA repair protein RadC [Leptotrichia hofstadii F0254]
 gi|260859809|gb|EEX74309.1| DNA repair protein RadC [Leptotrichia hofstadii F0254]
          Length = 239

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 63/97 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N L+ +E   RGTID   VYIRE++++ LE +A S+ILVHNHP+G+  PSD+DI
Sbjct: 143 LFLNTQNELLKEEELFRGTIDRSTVYIRELIKKILEYNAKSVILVHNHPAGSLRPSDSDI 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I + DH+II +  + SF    I+
Sbjct: 203 RLTKKVKEVFESLEIRLLDHLIISEKGYFSFLEGGIL 239


>gi|325479032|gb|EGC82133.1| DNA repair protein RadC [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 227

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/95 (43%), Positives = 59/95 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N++I+ E  S G +    V  RE+ +  ++ SA S+IL+HNHPSGNP PS  D 
Sbjct: 131 ILLDSKNVIISTETISVGDLSSTIVNPREVFKPAIKKSAKSVILIHNHPSGNPAPSMEDY 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           ++T+ +    + L+I V DHIIIG+D F SFK   
Sbjct: 191 HITKRLKEAGDILDIGVLDHIIIGRDDFYSFKKEG 225


>gi|108763923|ref|YP_630190.1| DNA repair protein RadC [Myxococcus xanthus DK 1622]
 gi|108467803|gb|ABF92988.1| DNA repair protein RadC [Myxococcus xanthus DK 1622]
          Length = 241

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  +  N+L+ D   + GT++  PV  RE+    L   ATSI+L HNHPSG+P PS  D+
Sbjct: 127 LCFNARNVLVHDARVAEGTMNTCPVDPREVFAAALTSRATSIVLAHNHPSGDPEPSVQDL 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++++     LNI V DH+++G   +VS     ++
Sbjct: 187 GLTRHLVAGAQLLNIKVLDHVVMGDGGYVSMLERGLM 223


>gi|145299092|ref|YP_001141933.1| RadC family DNA repair protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851864|gb|ABO90185.1| DNA repair protein, RadC family [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 163

 Score =  120 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + +I       GTID   VY RE+V+  L+ +A ++IL HNHPSG   PS ADI
Sbjct: 67  ILLDNQHRVIDTVDLIHGTIDSAAVYPREVVKTALKYNAAAVILAHNHPSGIAEPSRADI 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L+ + I V DH+++  +  VSF    +I
Sbjct: 127 QITERLQAALDFVEIRVLDHVVVAGEYSVSFAERGLI 163


>gi|196230018|ref|ZP_03128881.1| DNA repair protein RadC [Chthoniobacter flavus Ellin428]
 gi|196225615|gb|EDY20122.1| DNA repair protein RadC [Chthoniobacter flavus Ellin428]
          Length = 231

 Score =  120 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 5/102 (4%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD   +LI  E  S G+++    + RE+ +  L  SA ++ILVHNHPSG+P PS AD 
Sbjct: 130 VLLDTKYLLIRVEEISHGSLNESIAHPREVFRPALIYSAYAVILVHNHPSGDPTPSSADH 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA-----FVSFKGLRII 97
            +T+ ++     L I + DH+I+G        + SFK   II
Sbjct: 190 QLTRRLVQGAELLQIRLLDHVILGTGDNGRLPYFSFKEAGII 231


>gi|331091135|ref|ZP_08339977.1| hypothetical protein HMPREF9477_00620 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405357|gb|EGG84893.1| hypothetical protein HMPREF9477_00620 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 231

 Score =  120 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+    LI +   S+GT++   V  RE+    L+ +A SIIL+HNHPSG+P PS  DI
Sbjct: 135 LMLNTKARLIGETDISKGTVNASLVSPRELFIEALQKNAVSIILLHNHPSGDPTPSKEDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I    + + I + DHIIIG + ++S     ++
Sbjct: 195 LITKRIKEAGSLIGIELLDHIIIGNNCYISLAEKNLV 231


>gi|145219983|ref|YP_001130692.1| DNA repair protein RadC [Prosthecochloris vibrioformis DSM 265]
 gi|238685550|sp|A4SFD1|Y1178_PROVI RecName: Full=UPF0758 protein Cvib_1178
 gi|145206147|gb|ABP37190.1| DNA replication and repair protein RadC [Chlorobium phaeovibrioides
           DSM 265]
          Length = 223

 Score =  120 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +   E  + GT++   ++ RE+ +  +  SA +IILVHNHPSG+  PS+AD 
Sbjct: 126 LHLNTKNQITKCEEVTIGTLNASLIHPREVFKAAIRESANAIILVHNHPSGDTEPSNADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      + I + DH+IIGK  + SF+    +
Sbjct: 186 QVTNLLKQASAVIQIDLLDHVIIGKTGWYSFRENNQL 222


>gi|220932261|ref|YP_002509169.1| DNA repair protein RadC [Halothermothrix orenii H 168]
 gi|219993571|gb|ACL70174.1| DNA repair protein RadC [Halothermothrix orenii H 168]
          Length = 228

 Score =  120 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +  D  N LIA    SRG +    V+ RE+ +  +  S+ ++ILVHNHPSG+P+PSD DI
Sbjct: 132 ILFDIKNQLIAISEISRGGLSSSIVHPREVFKEAIRRSSAAVILVHNHPSGDPSPSDEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ ++ +   L + V DHIIIG   ++S K   +I
Sbjct: 192 NVTRRLVDSGKILGVDVLDHIIIGDGVYLSMKKENLI 228


>gi|218282132|ref|ZP_03488431.1| hypothetical protein EUBIFOR_01006 [Eubacterium biforme DSM 3989]
 gi|218216925|gb|EEC90463.1| hypothetical protein EUBIFOR_01006 [Eubacterium biforme DSM 3989]
          Length = 224

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI+  V  +GT++   V+ RE+ +     +A S+++ HNHPSG+  PS AD 
Sbjct: 127 LYLDTKSKLISHRVLFKGTLNESVVHPREVFKEAFLQNANSVLIAHNHPSGDCTPSKADF 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++     + + + DHII+ K+ + SFK  + +
Sbjct: 187 EVTYKMVHVAMTMGVCLVDHIIVCKNQYYSFKEHKYL 223


>gi|325661600|ref|ZP_08150224.1| hypothetical protein HMPREF0490_00958 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331084842|ref|ZP_08333930.1| hypothetical protein HMPREF0987_00233 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325472127|gb|EGC75341.1| hypothetical protein HMPREF0490_00958 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330410936|gb|EGG90358.1| hypothetical protein HMPREF0987_00233 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 231

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+    L+ +   S+GT++   +  RE+    L+ +A SIIL+HNHPSG+P PS  D+
Sbjct: 135 LMLNTKAKLLGETTISKGTVNASLLTPRELFIEALQKNAVSIILLHNHPSGDPTPSREDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I    + + I + DHIIIG + ++SF    +I
Sbjct: 195 LITKRIKEAGSLIGIELLDHIIIGNNCYISFAEQELI 231


>gi|188992506|ref|YP_001904516.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167734266|emb|CAP52476.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris]
          Length = 159

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/96 (42%), Positives = 58/96 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E    GTID   ++ R + +R LEL+A ++IL HNHPSGNP PS+AD 
Sbjct: 63  VFLDNQHHILAAEHLFSGTIDGCEIHPRVVAKRALELNAAAVILFHNHPSGNPEPSEADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +TQ +   L  L+I V DH++IG    VS      
Sbjct: 123 KVTQRLQEALGLLDIRVLDHLVIGGQKSVSLAARGW 158


>gi|153953499|ref|YP_001394264.1| DNA repair protein RadC [Clostridium kluyveri DSM 555]
 gi|219854121|ref|YP_002471243.1| hypothetical protein CKR_0778 [Clostridium kluyveri NBRC 12016]
 gi|189029393|sp|A5N6I5|Y865_CLOK5 RecName: Full=UPF0758 protein CKL_0865
 gi|254764433|sp|B9E004|Y778_CLOK1 RecName: Full=UPF0758 protein CKR_0778
 gi|146346380|gb|EDK32916.1| DNA repair protein RadC-like protein [Clostridium kluyveri DSM 555]
 gi|219567845|dbj|BAH05829.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 228

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N++I  +    GT++   V+ REI    ++ ++ SIIL HNHPSG+P+PS+ D+
Sbjct: 132 ILLNTKNMVIGIKNVFIGTLNSSIVHPREIFFYAIKKNSASIILCHNHPSGDPSPSNEDV 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      L I + DH+IIG   F+S K   I+
Sbjct: 192 NVTFRLKKCGELLGIQLVDHLIIGNGIFISLKEKGIL 228


>gi|317123022|ref|YP_004103025.1| DNA repair protein RadC [Thermaerobacter marianensis DSM 12885]
 gi|315593002|gb|ADU52298.1| DNA repair protein RadC [Thermaerobacter marianensis DSM 12885]
          Length = 351

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  + ++  ++ S GT++   V+ RE+ +  +   A ++ILVHNHPSG+P PS  D+
Sbjct: 252 VLLNTKHYVLGVDLISIGTLNGSMVHPREVFRAAVRRGAAALILVHNHPSGDPTPSPEDV 311

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I V DH+IIG   ++S +   ++
Sbjct: 312 QVTRRLVEAGRIMGIDVLDHVIIGNQRYISLREAGLV 348


>gi|325849901|ref|ZP_08170940.1| DNA repair protein RadC [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325479925|gb|EGC83008.1| DNA repair protein RadC [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 226

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N++I+ E+ S G ++   V  RE     +  SA +II VHNHPSGN NPS  D 
Sbjct: 130 ILLDTKNVIISKELISTGDLNSSIVNPRECFIAAVRKSANAIIFVHNHPSGNCNPSRNDK 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++     L+I V DHI+IG   + SFK   ++
Sbjct: 190 IITDRLVQAGKILDISVLDHIVIGNGKYFSFKKECLM 226


>gi|323699098|ref|ZP_08111010.1| DNA repair protein RadC [Desulfovibrio sp. ND132]
 gi|323459030|gb|EGB14895.1| DNA repair protein RadC [Desulfovibrio desulfuricans ND132]
          Length = 229

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++A E  S+GT +   ++ REI    L+L AT++ILVHNHP G  +PS ADI
Sbjct: 133 VFLDTKNRVMAWEQMSKGTTNATAIFPREIAAAALKLEATNVILVHNHPGGGSDPSGADI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++     L+I V DHII+    + SF     +
Sbjct: 193 LLTDKVVEACASLDIAVRDHIIVTDHDYYSFNEFGRL 229


>gi|148654928|ref|YP_001275133.1| DNA repair protein RadC [Roseiflexus sp. RS-1]
 gi|166218791|sp|A5URD0|Y767_ROSS1 RecName: Full=UPF0758 protein RoseRS_0767
 gi|148567038|gb|ABQ89183.1| DNA repair protein RadC [Roseiflexus sp. RS-1]
          Length = 233

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +   +    G++    V I EI +  + L++ SII+VHNHPSG+P PS  D+
Sbjct: 133 ICLDTKNRVQKIQTVYIGSLHTSMVRIGEIFKEPIRLNSASIIVVHNHPSGDPTPSPEDV 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ II     L+I V DH++IG   FVS +   +
Sbjct: 193 VVTRQIIEAGRLLDIDVLDHLVIGAGRFVSMRERGL 228


>gi|59714363|ref|YP_207137.1| DNA repair protein RadC [Vibrio fischeri ES114]
 gi|59482640|gb|AAW88249.1| DNA repair protein RadC [Vibrio fischeri ES114]
          Length = 165

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI     S G+I    VY RE+++  L  +A ++I  HNHPSG   PSDAD 
Sbjct: 69  LMLDNQHRLIKFVEHSVGSISSASVYPREVLKSVLHYNAAAVIFAHNHPSGVAEPSDADR 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  + + L  +++ V DH +IG    VSF     I
Sbjct: 129 RITARLSSALELIDVKVLDHFVIGVGETVSFAKRGWI 165


>gi|332188698|ref|ZP_08390412.1| DNA repair RadC family protein [Sphingomonas sp. S17]
 gi|332011262|gb|EGI53353.1| DNA repair RadC family protein [Sphingomonas sp. S17]
          Length = 229

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 66/97 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N+LI DE+   G+ID  PVYIRE+++R ++  + ++ILVHNHPSG+P+PS ADI
Sbjct: 133 LHLNTRNMLIRDELMGEGSIDQAPVYIREVIRRAIDFGSAALILVHNHPSGDPSPSRADI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ I      L I VHDH+IIG    VS +   +I
Sbjct: 193 DVTRAIAEAGKRLGITVHDHLIIGTSGHVSLRAQGLI 229


>gi|293406039|ref|ZP_06650027.1| DNA repair protein [Escherichia coli FVEC1412]
 gi|291426883|gb|EFE99913.1| DNA repair protein [Escherichia coli FVEC1412]
          Length = 155

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 35/89 (39%), Positives = 54/89 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFV 89
            +T+ ++  L  ++I V DH+I+G     
Sbjct: 127 LITERLVQALGLVDIRVPDHLIVGGSQVF 155


>gi|89895926|ref|YP_519413.1| hypothetical protein DSY3180 [Desulfitobacterium hafniense Y51]
 gi|219670358|ref|YP_002460793.1| DNA repair protein RadC [Desulfitobacterium hafniense DCB-2]
 gi|122481851|sp|Q24SM3|Y3180_DESHY RecName: Full=UPF0758 protein DSY3180
 gi|254789647|sp|B8FVF5|Y4352_DESHD RecName: Full=UPF0758 protein Dhaf_4352
 gi|89335374|dbj|BAE84969.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219540618|gb|ACL22357.1| DNA repair protein RadC [Desulfitobacterium hafniense DCB-2]
          Length = 227

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 55/95 (57%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L   N ++     S G+++   V+ RE  +  +  ++ +IIL+HNHPSG+P PS  DI++
Sbjct: 133 LSTKNHVLGISSISVGSLNSSLVHPRECFKEAIRRNSNAIILLHNHPSGDPTPSSEDIDV 192

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +      L I V DH+IIG + ++S K   I+
Sbjct: 193 TRRLSDGGQILGIEVLDHVIIGDNRYISLKERGIL 227


>gi|189184090|ref|YP_001937875.1| DNA repair protein RadC [Orientia tsutsugamushi str. Ikeda]
 gi|189180861|dbj|BAG40641.1| DNA repair protein RadC [Orientia tsutsugamushi str. Ikeda]
          Length = 226

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 52/97 (53%), Positives = 66/97 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NI+IADE+   GT+D  PVY REIV+R L   A++IILVHNHPSG P PS  DI
Sbjct: 130 LFLNKKNIIIADELHGIGTVDQTPVYPREIVKRALFHEASAIILVHNHPSGTPKPSAIDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I+      +IIVHDH+II  + F SFK   ++
Sbjct: 190 EITTKIVEACKTFSIIVHDHVIICSNNFFSFKSNLLL 226


>gi|199597494|ref|ZP_03210923.1| DNA repair protein [Lactobacillus rhamnosus HN001]
 gi|199591517|gb|EDY99594.1| DNA repair protein [Lactobacillus rhamnosus HN001]
          Length = 222

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 37/92 (40%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I +++ + GT+D      R + +  L+LSAT++I+VHNHPSG+P+PS AD 
Sbjct: 124 LFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + T         L + + DH+IIG+  + SF 
Sbjct: 184 DTTTRFQLAAALLGMHLLDHLIIGRQTYYSFA 215


>gi|303241148|ref|ZP_07327656.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2]
 gi|302591275|gb|EFL61015.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2]
          Length = 226

 Score =  120 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +   E+   GTI+  PVY R +V+  +   A S+IL HNHP G+ NPS ADI
Sbjct: 125 ICLDSQNKVNYSELVHEGTINEAPVYPRLLVEAAIRHKANSVILAHNHPGGSLNPSRADI 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ I   L  ++I V DHII+    + SF     +
Sbjct: 185 EATRTICNALESISIKVIDHIIVCGGKYYSFAENGRM 221


>gi|168187572|ref|ZP_02622207.1| DNA repair protein [Clostridium botulinum C str. Eklund]
 gi|169294516|gb|EDS76649.1| DNA repair protein [Clostridium botulinum C str. Eklund]
          Length = 228

 Score =  120 bits (302), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N++I+ +  S G+++   V+ RE+    L+ ++ SI++ HNHPSG+P PS  DI
Sbjct: 132 IMLNTKNVVISCKDVSIGSLNSAIVHPREVFSEALKKNSASIVICHNHPSGDPTPSSEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      L I + DH+IIG   ++S K   I+
Sbjct: 192 HVTKRLKKCGVILGIDLLDHLIIGHSNYISLKEKNIL 228


>gi|269958556|ref|YP_003328343.1| DNA repair protein RadC [Anaplasma centrale str. Israel]
 gi|269848385|gb|ACZ49029.1| DNA repair protein RadC [Anaplasma centrale str. Israel]
          Length = 230

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 65/97 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   +IADE+Q+ GTID  P+Y+RE+V++ L   A+ I++ HNHPSG+P PS ADI
Sbjct: 134 LYLNKKYRVIADEIQNTGTIDETPLYVREVVKKSLLHDASYIVVSHNHPSGDPKPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +      +NI++ DH+II      SFK   ++
Sbjct: 194 HITNRLQEACCSMNIVLVDHVIITPKRHYSFKTNGLL 230


>gi|154248875|ref|YP_001409700.1| DNA repair protein RadC [Fervidobacterium nodosum Rt17-B1]
 gi|154152811|gb|ABS60043.1| DNA repair protein RadC [Fervidobacterium nodosum Rt17-B1]
          Length = 225

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    +I  +  S+GTI+    + R+I +  +  S+T IIL HNHPSG+P PS  DI
Sbjct: 124 IFLDTKLKVIGSKDVSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPSKDDI 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ I      L I +HDH+IIG   F S +  
Sbjct: 184 ELTKKIKKAGELLGINLHDHVIIG-QTFYSLRQK 216


>gi|88606961|ref|YP_504859.1| DNA repair protein RadC [Anaplasma phagocytophilum HZ]
 gi|88598024|gb|ABD43494.1| DNA repair protein RadC [Anaplasma phagocytophilum HZ]
          Length = 232

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 64/97 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   LIADEVQS GT+D  P+YIRE++++ L   A  I++ HNHPSG+P PS ADI
Sbjct: 136 LYLNKRYSLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPSKADI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +    N ++I + DH+I+      SFK   ++
Sbjct: 196 NVTNKLRIACNSMDIELVDHVIVTSKRHYSFKTHGLL 232


>gi|218132457|ref|ZP_03461261.1| hypothetical protein BACPEC_00316 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992567|gb|EEC58569.1| hypothetical protein BACPEC_00316 [Bacteroides pectinophilus ATCC
           43243]
          Length = 246

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    LI DE+ S GT++   V  REI    L   A  I+++HNHPSG+  PS  DI
Sbjct: 146 VMLDTKLRLIKDEIISTGTVNASIVSPREIFVAALRAGAVFIVMLHNHPSGDAEPSSNDI 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I + DHIIIG + FVS K   ++
Sbjct: 206 AITRRVQLAGEMLGISLIDHIIIGDNRFVSLKESGLM 242


>gi|294140110|ref|YP_003556088.1| DNA repair protein, RadC family [Shewanella violacea DSS12]
 gi|293326579|dbj|BAJ01310.1| DNA repair protein, RadC family [Shewanella violacea DSS12]
          Length = 158

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  + LI       GTID   VY RE+V+  LE++A ++I  HNHPSG   PS AD 
Sbjct: 63  MMLNSQHQLIEFRELFFGTIDAASVYPREVVKAVLEVNAAAVIFSHNHPSGESEPSQADK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DHI+IG     SF    ++
Sbjct: 123 LITKKLTDALGLIDVRVLDHIVIGA-TPTSFAEKGLL 158


>gi|187929782|ref|YP_001900269.1| DNA repair protein RadC [Ralstonia pickettii 12J]
 gi|238691809|sp|B2UAP0|Y2712_RALPJ RecName: Full=UPF0758 protein Rpic_2712
 gi|187726672|gb|ACD27837.1| DNA repair protein RadC [Ralstonia pickettii 12J]
          Length = 224

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/94 (41%), Positives = 58/94 (61%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FLD  + LIA E   RGT+    VY REI +R L  +A ++IL HNHP+GN  PS++D+ 
Sbjct: 129 FLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDVI 188

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           +T+ +   L  L++IV DH+I+G++    F    
Sbjct: 189 LTRELCRALAMLDVIVLDHMIVGRNHVYGFLEHG 222


>gi|119357558|ref|YP_912202.1| DNA repair protein RadC [Chlorobium phaeobacteroides DSM 266]
 gi|229485547|sp|A1BHA1|Y1761_CHLPD RecName: Full=UPF0758 protein Cpha266_1761
 gi|119354907|gb|ABL65778.1| DNA replication and repair protein RadC [Chlorobium
           phaeobacteroides DSM 266]
          Length = 223

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I +E  + GT++    + RE+ +  +  SA +IILVHNHPSG+  PS+AD 
Sbjct: 126 LHLNTKNQIIRNEQVTVGTLNASLAHPREVFKSAIRESAHAIILVHNHPSGDVEPSNADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    + L I + DH+IIG D + SF+   ++
Sbjct: 186 QVTEILRQAGSFLQIDLLDHVIIGVDTWFSFREHSLL 222


>gi|256420577|ref|YP_003121230.1| DNA repair protein RadC [Chitinophaga pinensis DSM 2588]
 gi|256035485|gb|ACU59029.1| DNA repair protein RadC [Chitinophaga pinensis DSM 2588]
          Length = 237

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  + ++     S G I    V  + I +  LEL AT +IL HNHPSGN  PS ADI
Sbjct: 140 LYLNHASRVLQHRCISIGGITGTIVDPKVIFREALELGATQVILCHNHPSGNLRPSTADI 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L+I V DHII+ +  + S      I
Sbjct: 200 QITEKLKAAGRLLDISVLDHIIVSEAGYCSMVEEGFI 236


>gi|225572122|ref|ZP_03780986.1| hypothetical protein RUMHYD_00416 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040388|gb|EEG50634.1| hypothetical protein RUMHYD_00416 [Blautia hydrogenotrophica DSM
           10507]
          Length = 228

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N  +A+ V + GT++   +  RE+    L   A +I+L+HNHPSG+P PS  DI
Sbjct: 131 VMLNTKNQYLAERVITTGTVNASLISARELFLEALRNKAVNILLIHNHPSGDPTPSREDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             TQ I      L+I + DHI+IG   +VS +   +I
Sbjct: 191 LATQKIFQVGELLDIRLLDHIVIGDQRYVSMRSEGLI 227


>gi|55823375|ref|YP_141816.1| DNA repair protein RadC [Streptococcus thermophilus CNRZ1066]
 gi|73913743|sp|Q5LYU6|Y1465_STRT1 RecName: Full=UPF0758 protein str1465
 gi|55739360|gb|AAV63001.1| DNA repair protein [Streptococcus thermophilus CNRZ1066]
          Length = 228

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILYYACHLMATSLIVVHNHPSGEAYPSRNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + + L I + DH+I+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCDDLGICLLDHLIVGKSTYYSFREER 223


>gi|329113315|ref|ZP_08242096.1| DNA repair protein RadC [Acetobacter pomorum DM001]
 gi|326697140|gb|EGE48800.1| DNA repair protein RadC [Acetobacter pomorum DM001]
          Length = 254

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 45/97 (46%), Positives = 64/97 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ + L+ D+V  +GT+DH PVY REIV R L+L AT ++LVHNHPSG+P PS  D+
Sbjct: 158 LFLNEKHQLLVDDVMGQGTVDHTPVYPREIVSRALQLKATILVLVHNHPSGDPTPSADDV 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      +NI V DHII+  +  +S +   ++
Sbjct: 218 VMTTQICGAAKIMNIHVWDHIIVAGEKLLSMREAGLL 254


>gi|261400629|ref|ZP_05986754.1| DNA repair protein RadC [Neisseria lactamica ATCC 23970]
 gi|313668384|ref|YP_004048668.1| DNA repair protein [Neisseria lactamica ST-640]
 gi|269209535|gb|EEZ75990.1| DNA repair protein RadC [Neisseria lactamica ATCC 23970]
 gi|313005846|emb|CBN87302.1| putative DNA repair protein [Neisseria lactamica 020-06]
          Length = 225

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LI     SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS ADI
Sbjct: 128 LLLNRQNRLIGVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSHADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+      SF+ L ++
Sbjct: 188 AFTRRLAQAMSLVDVSLLDHFIVTSQTVCSFRQLGLM 224


>gi|38638114|ref|NP_943224.1| hypothetical protein pEL60p25 [Erwinia amylovora]
 gi|37682012|gb|AAQ97899.1| ORF25 [Erwinia amylovora]
          Length = 149

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 57/96 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FL+ HN +IA E   +GTI  V V+ R ++QR L  +A +++L HNHPS N  PS AD  
Sbjct: 54  FLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTTPSQADKL 113

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ +   L  +++ V DH+I+G     SF    +I
Sbjct: 114 ITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGLI 149


>gi|164687854|ref|ZP_02211882.1| hypothetical protein CLOBAR_01498 [Clostridium bartlettii DSM
           16795]
 gi|164603129|gb|EDQ96594.1| hypothetical protein CLOBAR_01498 [Clostridium bartlettii DSM
           16795]
          Length = 235

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I D   S GT++   V+ RE+ +  +  S+  IIL+HNHPSG P PS  D 
Sbjct: 139 VLLNTKNEIITDIDISIGTLNSSLVHPREVFREAIRRSSNKIILIHNHPSGCPTPSAEDK 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++   + + I V DHIIIG   + SFK   +I
Sbjct: 199 VVTNRLVKCGDIIGIEVIDHIIIGDGLYFSFKENMLI 235


>gi|37524159|ref|NP_927503.1| hypothetical protein plu0133 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36783582|emb|CAE12428.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 157

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+  E    GTI H   + REIV+  L  +A ++IL HNHPSG  + S AD 
Sbjct: 61  LYLDNQHRLLEHETLFLGTISHTEAHPREIVKSALRHNAAAVILAHNHPSGITDASKADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I+ TLN + + V  H IIG    +SF  +  +
Sbjct: 121 TITDRIVNTLNLVEVRVLGHFIIGDGNTLSFAEMGWL 157


>gi|297183085|gb|ADI19229.1| DNA repair proteins [uncultured delta proteobacterium HF0200_14D13]
          Length = 619

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + ++ +   ++G ++   V+ RE+  R +E  A +++ VHNHPSG+P PS  D 
Sbjct: 523 VLLDNKHRVLEEVNVTQGLLNKSLVHPREVFARAVEARAAALVCVHNHPSGDPEPSPEDR 582

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++ +   + I V DH++IG+D + SF    ++
Sbjct: 583 RITERLVESGKLIGIQVLDHVVIGRDDYFSFADKGLL 619


>gi|238028403|ref|YP_002912634.1| DNA repair protein RadC [Burkholderia glumae BGR1]
 gi|237877597|gb|ACR29930.1| DNA repair protein RadC [Burkholderia glumae BGR1]
          Length = 266

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + L+ DE  + GT+  + VY REIV+R LEL A ++I+ HNHPSG   PS  D 
Sbjct: 170 LYLDAQHRLVHDEEATHGTLTRMAVYPREIVRRALELKAAALIVAHNHPSGAVRPSAEDR 229

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DHI++G     SF    ++
Sbjct: 230 RLTRVLHDALALVDVRLIDHIVVGASETFSFAQAGLM 266


>gi|212695706|ref|ZP_03303834.1| hypothetical protein ANHYDRO_00226 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677379|gb|EEB36986.1| hypothetical protein ANHYDRO_00226 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 226

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N++I+ E+ S G ++   V  RE     +  SA +II VHNHPSGN NPS  D 
Sbjct: 130 ILLDTKNVIISKELISTGDLNSSIVNPRECFIAAVRKSANAIIFVHNHPSGNCNPSRNDK 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++     L+I V DHI+IG   + SFK   ++
Sbjct: 190 IITDRLVQAGKILDISVLDHIVIGNGKYFSFKKECLM 226


>gi|253699429|ref|YP_003020618.1| DNA repair protein RadC [Geobacter sp. M21]
 gi|251774279|gb|ACT16860.1| DNA repair protein RadC [Geobacter sp. M21]
          Length = 166

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +   +  S G+++   V+ RE+ +  L  SA ++IL+HNHP+G+P PS  DI
Sbjct: 71  VHLDGKNRICCIDEVSVGSLNQSIVHPREVFKTALLSSAAALILLHNHPTGDPTPSREDI 130

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    + + + + DH+IIG   F+SF    ++
Sbjct: 131 EITRRLKEAGDLIGVKILDHVIIGDH-FLSFANAGLL 166


>gi|91204972|ref|YP_537327.1| DNA repair protein RadC [Rickettsia bellii RML369-C]
 gi|91068516|gb|ABE04238.1| DNA repair protein RadC [Rickettsia bellii RML369-C]
          Length = 249

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 55/97 (56%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NILIADEV S+GTID   VY REI++R L   A++IILVHNHPSG+P+PS A I
Sbjct: 153 LFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKAGI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  I+     +NIIVHDH+II  + + SFK   ++
Sbjct: 213 DMTNIIVDMCKTINIIVHDHVIISNNKYFSFKSNMLL 249


>gi|221199269|ref|ZP_03572313.1| DNA repair protein RadC [Burkholderia multivorans CGD2M]
 gi|221205829|ref|ZP_03578844.1| DNA repair protein RadC [Burkholderia multivorans CGD2]
 gi|221174667|gb|EEE07099.1| DNA repair protein RadC [Burkholderia multivorans CGD2]
 gi|221180554|gb|EEE12957.1| DNA repair protein RadC [Burkholderia multivorans CGD2M]
          Length = 214

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+  + L+A ++I+ HNHPSG   PS  D 
Sbjct: 118 LYLDARHGLIDMEENARGSLTRMAVYPREIVRSAMRLNAAALIVAHNHPSGAVQPSAEDR 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++GK    SF     +
Sbjct: 178 RLTRTLRDALALVDVRLLDHVVVGKADTFSFARAGWL 214


>gi|134095055|ref|YP_001100130.1| putative DNA repair protein in putative prophage region (radC-like)
           [Herminiimonas arsenicoxydans]
 gi|133738958|emb|CAL62006.1| Putative DNA repair protein RadC-like [Herminiimonas
           arsenicoxydans]
          Length = 166

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I      RGTID   VY RE+ +  LE +A ++IL HNHPSG P PS ADI
Sbjct: 70  LLLDTQHKIIGFHEMFRGTIDSTSVYPREVAKLALEHNAAAVILTHNHPSGEPTPSQADI 129

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +I +L  + + V DHI++      S     
Sbjct: 130 KLTKVLIESLALIGVRVLDHIVVSSQGCASLAERG 164


>gi|119943849|ref|YP_941529.1| DNA repair protein RadC [Psychromonas ingrahamii 37]
 gi|171704612|sp|A1SR15|Y056_PSYIN RecName: Full=UPF0758 protein Ping_0056
 gi|119862453|gb|ABM01930.1| DNA repair protein RadC [Psychromonas ingrahamii 37]
          Length = 225

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + +I       G+ID   V+ R I Q+ L  +A +IILVHNHPSG+P+ S+AD 
Sbjct: 129 ILLDTQHRIIRFHEFFFGSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSASEADK 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I++ L  +++ V DH+++G     SF     I
Sbjct: 189 MITQKIVSALQLIDVRVLDHLVVGHKKCTSFAENGWI 225


>gi|241663908|ref|YP_002982268.1| DNA repair protein RadC [Ralstonia pickettii 12D]
 gi|240865935|gb|ACS63596.1| DNA repair protein RadC [Ralstonia pickettii 12D]
          Length = 224

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 39/94 (41%), Positives = 58/94 (61%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FLD  + LIA E   RGT+    VY REI +R L  +A ++IL HNHP+GN  PS++D+ 
Sbjct: 129 FLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDVI 188

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           +T+ +   L  L++IV DH+I+G++    F    
Sbjct: 189 LTRELCRALAMLDVIVLDHMIVGRNHVYGFLEHG 222


>gi|55821449|ref|YP_139891.1| DNA repair protein RadC [Streptococcus thermophilus LMG 18311]
 gi|73913744|sp|Q5M3F9|Y1465_STRT2 RecName: Full=UPF0758 protein stu1465
 gi|55737434|gb|AAV61076.1| DNA repair protein [Streptococcus thermophilus LMG 18311]
 gi|312278780|gb|ADQ63437.1| DNA repair protein RadC [Streptococcus thermophilus ND03]
          Length = 228

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILYYACHLMATSLIVVHNHPSGEAYPSRNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + + L I + DH+I+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCDDLGICLLDHLIVGKSTYYSFREER 223


>gi|254523925|ref|ZP_05135980.1| DNA repair protein RadC [Stenotrophomonas sp. SKA14]
 gi|219721516|gb|EED40041.1| DNA repair protein RadC [Stenotrophomonas sp. SKA14]
          Length = 110

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F++  + ++A E    GTI+   VY R ++QR L+L+A ++I  H HPSG   PS+AD 
Sbjct: 14  VFMNSMHDVLAVEPMFHGTINATSVYPRVVLQRALQLNAAAVIFAHQHPSGTTEPSNADR 73

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + T L  +++ V DH +IG+    SF    ++
Sbjct: 74  LLTEQLKTALALIDVRVLDHFVIGQGTPYSFAESGLL 110


>gi|319892706|ref|YP_004149581.1| DNA repair protein RadC [Staphylococcus pseudintermedius HKU10-03]
 gi|317162402|gb|ADV05945.1| DNA repair protein RadC [Staphylococcus pseudintermedius HKU10-03]
          Length = 227

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 32/90 (35%), Positives = 59/90 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N ++ ++    GT++   ++ RE+ +  L+ SA +II++HNHPSG+  PS+ADI
Sbjct: 130 LILNTKNQIVHEQTLFIGTLNSAIIHPREVFKTALKWSANAIIVIHNHPSGDATPSEADI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
             T+ ++     + I + DHI+IG++++VS
Sbjct: 190 ETTKRLVACGEAMGIELLDHIVIGEESYVS 219


>gi|284035456|ref|YP_003385386.1| DNA repair protein RadC [Spirosoma linguale DSM 74]
 gi|283814749|gb|ADB36587.1| DNA repair protein RadC [Spirosoma linguale DSM 74]
          Length = 231

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L +++ N ++     S G +       + I ++ +E  A+S+IL HNHPSGN  PS AD 
Sbjct: 135 LLMNRANEILRPVQISTGGVSGTIADPKLIFKQAIEYLASSMILFHNHPSGNLTPSQADK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      L+I V DH+I    A+ SF    I+
Sbjct: 195 DLTRKLKDAGRLLDIPVLDHLIFTDKAYYSFADEGIL 231


>gi|322516365|ref|ZP_08069290.1| DNA repair protein RadC [Streptococcus vestibularis ATCC 49124]
 gi|322125098|gb|EFX96491.1| DNA repair protein RadC [Streptococcus vestibularis ATCC 49124]
          Length = 228

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSRNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + + L I + DHII+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCDDLGICLLDHIIVGKSTYYSFREER 223


>gi|315651397|ref|ZP_07904422.1| DNA repair protein RadC [Eubacterium saburreum DSM 3986]
 gi|315486356|gb|EFU76713.1| DNA repair protein RadC [Eubacterium saburreum DSM 3986]
          Length = 236

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 45/97 (46%), Positives = 65/97 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD     I+D V S GT++   V +REI+   L+  A ++IL+HNHPSG+P+PS ADI
Sbjct: 140 VFLDTRQRPISDMVISVGTVNSSLVSVREILIESLKHLAVNVILLHNHPSGDPSPSKADI 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+NI   LN + I + DHI+IG + + SFK   II
Sbjct: 200 DITKNINNALNSIGIELIDHIVIGDNCYYSFKEQGII 236


>gi|312863769|ref|ZP_07724007.1| DNA repair protein RadC [Streptococcus vestibularis F0396]
 gi|311101305|gb|EFQ59510.1| DNA repair protein RadC [Streptococcus vestibularis F0396]
          Length = 228

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSRNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + + L I + DHII+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCDDLGICLLDHIIVGKSTYYSFREER 223


>gi|22299250|ref|NP_682497.1| DNA repair protein RadC [Thermosynechococcus elongatus BP-1]
 gi|32699671|sp|Q8DI83|Y1707_THEEB RecName: Full=UPF0758 protein tlr1707
 gi|22295432|dbj|BAC09259.1| DNA repair protein [Thermosynechococcus elongatus BP-1]
          Length = 250

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 32/93 (34%), Positives = 53/93 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + L+   V + GT      + REI +  +  +A+ +I+ HNHPSGN +PS AD+
Sbjct: 143 LLLDVRHRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIAHNHPSGNLSPSQADL 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           ++T+ I+     + I V DH+I+G   + S + 
Sbjct: 203 DLTKQILQAGQLMEIPVLDHLILGNGDYQSLRE 235


>gi|146318725|ref|YP_001198437.1| DNA repair protein [Streptococcus suis 05ZYH33]
 gi|145689531|gb|ABP90037.1| DNA repair protein [Streptococcus suis 05ZYH33]
          Length = 117

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 56/94 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I+ +    G+++      REI+   ++  ATSII+VHNHPSG+  PS  D+
Sbjct: 20  LYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDL 79

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+N+  +   L +++ DH+I+G   + SF+  
Sbjct: 80  LFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 113


>gi|293115593|ref|ZP_05792219.2| DNA repair protein RadC [Butyrivibrio crossotus DSM 2876]
 gi|292808989|gb|EFF68194.1| DNA repair protein RadC [Butyrivibrio crossotus DSM 2876]
          Length = 233

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+    LI +++ S GT+++  +  RE+ +  L   A  II+VHNHPSG+P PS  D 
Sbjct: 137 LLLNTKCELINEKILSMGTVNYTCITSREVYRYALSKGAVYIIVVHNHPSGDPTPSREDS 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +      + I + DHIIIG + ++S K   +I
Sbjct: 197 LCTKKLKEAGELVGIPLIDHIIIGDNRYISLKEQDMI 233


>gi|309378585|emb|CBX22763.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 225

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LI     SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS ADI
Sbjct: 128 LLLNRQNRLIGVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSHADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+      SF+ L ++
Sbjct: 188 AFTRRLAQAMSLVDVSLLDHFIVTSQTVCSFRQLGLM 224


>gi|37523034|ref|NP_926411.1| DNA repair protein RadC [Gloeobacter violaceus PCC 7421]
 gi|35214037|dbj|BAC91406.1| DNA repair protein [Gloeobacter violaceus PCC 7421]
          Length = 242

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 39/94 (41%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LIA  + S GTID    + REI +  +   A  II+ HNHPSG   PS  D+
Sbjct: 143 LLLDVKNRLIAHRIVSVGTIDETLAHPREIFREAIRQGAAGIIVAHNHPSGVTEPSPEDL 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T  +I     L I V DH+I+G+  F S + L
Sbjct: 203 RLTGQLIECGRTLQIPVLDHVILGQGNFTSLRRL 236


>gi|148284968|ref|YP_001249058.1| DNA repair protein [Orientia tsutsugamushi str. Boryong]
 gi|146740407|emb|CAM80876.1| DNA repair protein [Orientia tsutsugamushi str. Boryong]
          Length = 226

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 52/97 (53%), Positives = 66/97 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NI+IADE+   GT+D  PVY REIV+R L   A++IILVHNHPSG P PS  DI
Sbjct: 130 LFLNKKNIIIADELHGIGTVDQTPVYPREIVKRALFHEASAIILVHNHPSGTPKPSAIDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I+      +IIVHDH+II  + F SFK   ++
Sbjct: 190 EITTKIVEACKTFSIIVHDHVIICSNNFFSFKSNLLL 226


>gi|83643512|ref|YP_431947.1| DNA repair protein [Hahella chejuensis KCTC 2396]
 gi|83631555|gb|ABC27522.1| DNA repair protein [Hahella chejuensis KCTC 2396]
          Length = 146

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  +   RGT D   +++REI ++ L L+A ++IL HNHPS N  PS ADI
Sbjct: 50  MFLDNQHRVIEFDAMFRGTFDKATIHVREIAKKALLLNAAAVILSHNHPSQNSTPSQADI 109

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I  +LN   + V DH+IIG     SF    ++
Sbjct: 110 RITEEIKKSLNFFEVRVLDHVIIGGTNKYSFAENGLL 146


>gi|228477172|ref|ZP_04061810.1| DNA repair protein RadC [Streptococcus salivarius SK126]
 gi|228251191|gb|EEK10362.1| DNA repair protein RadC [Streptococcus salivarius SK126]
          Length = 228

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSRNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + + L I + DH+I+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCDDLGICLLDHLIVGKSTYYSFREER 223


>gi|126730724|ref|ZP_01746534.1| DNA repair protein RadC [Sagittula stellata E-37]
 gi|126708890|gb|EBA07946.1| DNA repair protein RadC [Sagittula stellata E-37]
          Length = 146

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 46/96 (47%), Positives = 69/96 (71%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD+ N +I+DE+ S GT+DHVPVY RE+++R L L+A +++L+HNHPSG+P PSDADI+
Sbjct: 51  YLDRKNRIISDELLSIGTVDHVPVYPREVIKRALMLNACALVLIHNHPSGDPTPSDADIS 110

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           M + I      L + +HDHII+G    +S + L  +
Sbjct: 111 MIKEIQKGCRYLGLTLHDHIIVGAGTELSLRALGKL 146


>gi|312865347|ref|ZP_07725575.1| DNA repair protein RadC [Streptococcus downei F0415]
 gi|311099458|gb|EFQ57674.1| DNA repair protein RadC [Streptococcus downei F0415]
          Length = 231

 Score =  119 bits (300), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 37/94 (39%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI  +    G++       REI+       ATS+I+VHNHPSG P+PS  DI
Sbjct: 129 LYLDTQNRLIKQQTIFIGSVQRSIAEPREILHYACRFMATSVIVVHNHPSGQPDPSRYDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ I    + L +   DHII+G D + SF+  
Sbjct: 189 AFTEKIKRCCDDLGLAFLDHIIVGSDNYYSFREE 222


>gi|295698144|ref|YP_003602800.1| DNA repair protein RadC [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295060256|gb|ADF64992.1| DNA repair protein RadC [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 147

 Score =  119 bits (300), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  + LI+ E+   GTI+   +  RE+ +  L L+A ++I  HNHPSG P PS ADI
Sbjct: 51  LYLNNQHQLISFELIHSGTINSCVISPREVARLALMLNAQAVIFAHNHPSGTPEPSRADI 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           NMT  + T L    I   DH I+  +  VS      I
Sbjct: 111 NMTARLKTALELFEISTLDHFIVAGNDVVSMAERGHI 147


>gi|160899615|ref|YP_001565197.1| DNA repair protein RadC [Delftia acidovorans SPH-1]
 gi|163858581|ref|YP_001632879.1| DNA repair protein radC-like protein [Bordetella petrii DSM 12804]
 gi|160365199|gb|ABX36812.1| DNA repair protein RadC [Delftia acidovorans SPH-1]
 gi|163262309|emb|CAP44612.1| DNA repair protein radC homolog [Bordetella petrii]
 gi|327479847|gb|AEA83157.1| DNA repair protein RadC [Pseudomonas stutzeri DSM 4166]
          Length = 164

 Score =  119 bits (300), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F++  + ++A E    GTI+   VY R ++QR L+L+A ++I  H HPSG   PS+AD 
Sbjct: 68  VFMNSMHDVLAVEPMFHGTINATSVYPRVVLQRALQLNAAAVIFAHQHPSGTTEPSNADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + T L  +++ V DH +IG+    SF    ++
Sbjct: 128 LLTEQLKTALALIDVRVLDHFVIGQGTPYSFAESGLL 164


>gi|116628169|ref|YP_820788.1| DNA repair protein RadC [Streptococcus thermophilus LMD-9]
 gi|122267235|sp|Q03JN0|Y1430_STRTD RecName: Full=UPF0758 protein STER_1430
 gi|116101446|gb|ABJ66592.1| DNA repair protein [Streptococcus thermophilus LMD-9]
          Length = 228

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSRNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + + L I + DH+I+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCDDLGICLLDHLIVGKSTYYSFREER 223


>gi|254501417|ref|ZP_05113568.1| DNA repair protein RadC [Labrenzia alexandrii DFL-11]
 gi|222437488|gb|EEE44167.1| DNA repair protein RadC [Labrenzia alexandrii DFL-11]
          Length = 228

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/97 (51%), Positives = 70/97 (72%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K + +IADEV   GT+DH PVY RE+++R L L A+++ILVHNHPSG+P PS  DI
Sbjct: 132 LFLNKKHGVIADEVMQEGTVDHTPVYPRELMRRALILQASALILVHNHPSGDPTPSRPDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  ++    PL I ++DHII+ +   VSFKG+ ++
Sbjct: 192 EMTAQLVDIAKPLGIEINDHIIVARGLAVSFKGMNLL 228


>gi|322373383|ref|ZP_08047919.1| DNA repair protein RadC [Streptococcus sp. C150]
 gi|321278425|gb|EFX55494.1| DNA repair protein RadC [Streptococcus sp. C150]
          Length = 228

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +    G +       REI+     L ATS+I+VHNHPSG   PS  DI
Sbjct: 129 IYLDTQNRIIQQKTVFIGGVRRSIAEPREILHYACHLMATSLIVVHNHPSGEAYPSHNDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ I  + N L I + DH+I+GK  + SF+  R
Sbjct: 189 DFTQKIKRSCNDLGICLLDHLIVGKSTYYSFREER 223


>gi|56417029|ref|YP_154103.1| DNA repair protein [Anaplasma marginale str. St. Maries]
 gi|222475397|ref|YP_002563814.1| DNA repair protein (radC) [Anaplasma marginale str. Florida]
 gi|255003383|ref|ZP_05278347.1| DNA repair protein (radC) [Anaplasma marginale str. Puerto Rico]
 gi|255004504|ref|ZP_05279305.1| DNA repair protein (radC) [Anaplasma marginale str. Virginia]
 gi|56388261|gb|AAV86848.1| DNA repair protein [Anaplasma marginale str. St. Maries]
 gi|222419535|gb|ACM49558.1| DNA repair protein (radC) [Anaplasma marginale str. Florida]
          Length = 230

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 65/97 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   +IADE+Q+ GTID  P+Y+RE+V++ L   A+ I++ HNHPSG+P PS ADI
Sbjct: 134 LYLNKKYRIIADEIQNTGTIDETPLYVREVVKKSLLHDASYIVVSHNHPSGDPKPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +      +NI++ DH+II      SFK   ++
Sbjct: 194 HITNRLQEACCSMNIVLVDHVIITPKRHYSFKTNGLL 230


>gi|67078119|ref|YP_245739.1| DNA repair protein [Bacillus cereus E33L]
 gi|66970425|gb|AAY60401.1| possible DNA repair protein [Bacillus cereus E33L]
          Length = 151

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 53/95 (55%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +I   + S+G+I+   V+ RE  +  +  +A SI+  HNHPSGNP+ S  D  +
Sbjct: 56  LNTKNEIIGCSIVSQGSINSSVVHPRETFRTAILNNAASIVCFHNHPSGNPDASPEDREV 115

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +      L I + DH+IIG+  FVS +    I
Sbjct: 116 TKRLAECGKILGIELLDHVIIGEHRFVSLREKGCI 150


>gi|329889720|ref|ZP_08268063.1| hypothetical protein BDIM_14090 [Brevundimonas diminuta ATCC
          11568]
 gi|328845021|gb|EGF94585.1| hypothetical protein BDIM_14090 [Brevundimonas diminuta ATCC
          11568]
          Length = 98

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/97 (53%), Positives = 75/97 (77%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          L+LDK NIL+ +E ++ GT+DH PVY+RE+V+R LELSA+++ILVHNHPSG+P PS ADI
Sbjct: 2  LYLDKRNILMREEHRADGTVDHAPVYVREVVRRALELSASAMILVHNHPSGDPTPSRADI 61

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           MT+ +I      +I VHDH+++G++   SF+ L +I
Sbjct: 62 EMTRRVIEAARVFDIQVHDHVVVGREGEQSFRALGLI 98


>gi|120437195|ref|YP_862881.1| DNA repair protein RadC [Gramella forsetii KT0803]
 gi|117579345|emb|CAL67814.1| DNA repair protein RadC [Gramella forsetii KT0803]
          Length = 232

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I     S+G I    V +R  +++ LEL A S+IL HNHPSGN   S+AD 
Sbjct: 136 IYLNNSNKVIEQFQISKGGITGTLVDVRITLKKALELGAVSLILAHNHPSGNLKASEADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + T    L+I V DHII+ + +++SF    ++
Sbjct: 196 QLTRKLKTASESLDIKVLDHIIVTEKSYLSFADEGML 232


>gi|311104975|ref|YP_003977828.1| DNA repair protein RadC 2 [Achromobacter xylosoxidans A8]
 gi|310759664|gb|ADP15113.1| DNA repair protein RadC 2 [Achromobacter xylosoxidans A8]
          Length = 225

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 52/95 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LIA    +RGT+    VY RE+V+  L   A ++I+ HNHPSG   PS AD 
Sbjct: 129 LYLDNRLRLIATGELARGTLSQASVYPREVVREALRHHAAALIIAHNHPSGLAEPSAADR 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
             TQ++   L  ++I + DH+I+     +S   L 
Sbjct: 189 GFTQHLKQALALVDIRLVDHLIVAAGTVISMAELG 223


>gi|323700938|gb|ADY00091.1| hypothetical protein [Escherichia coli]
          Length = 149

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 57/96 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FL+ HN +IA E   +GTI  V V+ R ++QR L  +A +++L HNHPS N  PS AD  
Sbjct: 54  FLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTAPSQADKL 113

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ +   L  +++ V DH+I+G     SF    +I
Sbjct: 114 ITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGLI 149


>gi|323157677|gb|EFZ43783.1| DNA repair RadC family protein [Escherichia coli EPECa14]
          Length = 253

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/86 (40%), Positives = 54/86 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKD 86
            +T+ ++  L  ++I V DH+I+G  
Sbjct: 122 LITERLVQALGLVDIRVPDHLIVGGS 147


>gi|296444788|ref|ZP_06886751.1| DNA repair protein RadC [Methylosinus trichosporium OB3b]
 gi|296257736|gb|EFH04800.1| DNA repair protein RadC [Methylosinus trichosporium OB3b]
          Length = 241

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LEL +T++IL HNHPSG+P PS AD+
Sbjct: 145 LFLDKRNALIADEVQGVGTVDHTPVYPREVVRRALELGSTALILAHNHPSGDPTPSTADV 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT +II    P  I VHDH+I+G++   S KGL++I
Sbjct: 205 RMTLDIIAIAQPFGIAVHDHLIVGRNGHSSLKGLKLI 241


>gi|78046671|ref|YP_362846.1| RadC family DNA repair protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78035101|emb|CAJ22746.1| RadC family DNA repair protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 159

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 56/96 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E    GT D   V+ R + +R LEL+A ++IL HNHPSGNP PS+AD 
Sbjct: 63  VFLDTKHHILATEHLFTGTTDACEVHSRVVAKRALELNAVAVILFHNHPSGNPEPSEADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +   L  L+I V DH++IG     S      
Sbjct: 123 KVTKRLEQALGLLDIRVLDHLVIGGRQHTSLAARGW 158


>gi|302333327|gb|ADL23520.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 228

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNVVIKESCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG + F S      
Sbjct: 188 LTTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223


>gi|320539885|ref|ZP_08039544.1| protein associated with replication fork, possible DNA repair
           protein [Serratia symbiotica str. Tucson]
 gi|320030071|gb|EFW12091.1| protein associated with replication fork, possible DNA repair
           protein [Serratia symbiotica str. Tucson]
          Length = 227

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  +    GTI  V V+ REIV+  L+ +A +IIL HNHPSG   PS AD 
Sbjct: 131 LFLDNQHRVIRHQEMFAGTISSVVVHPREIVRAALKANAAAIILAHNHPSGKAEPSHADR 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     L I V DH++IG+   VSF     +
Sbjct: 191 VITEQVINACLLLKIRVLDHLVIGRGECVSFAERGWL 227


>gi|289661519|ref|ZP_06483100.1| DNA repair protein RadC [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 156

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 57/95 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + LI      +GT++   VY+RE+ ++ L+L+A ++I+ HNHPS +P PS  D+
Sbjct: 60  IFLDHRHQLIEYAEMFQGTLNEAQVYMREVARKALQLNAAAVIVSHNHPSADPAPSWPDV 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            MT+ +   L  + + + DHI++G +  VS     
Sbjct: 120 VMTKRLREVLELVEVRLLDHIVVGGNRTVSMAAAG 154


>gi|254805054|ref|YP_003083275.1| DNA repair protein RadC [Neisseria meningitidis alpha14]
 gi|254668596|emb|CBA06141.1| DNA repair protein RadC [Neisseria meningitidis alpha14]
          Length = 225

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQSVCSFRQLGLM 224


>gi|118444603|ref|YP_877766.1| DNA repair protein RadC [Clostridium novyi NT]
 gi|166218779|sp|A0PZG4|Y1687_CLONN RecName: Full=UPF0758 protein NT01CX_1687
 gi|118135059|gb|ABK62103.1| DNA repair protein [Clostridium novyi NT]
          Length = 228

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  NI+I+ +  S G+++   V+ RE+    L+ ++ SI++ HNHPSG+P PS  DI
Sbjct: 132 IMLNTKNIVISCKDVSIGSLNSAIVHPREVFCEALKKNSASIVICHNHPSGDPTPSSEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ +      L I + DH+IIG   ++S K   I+
Sbjct: 192 NVTKRLKQCGIILGINLLDHLIIGHSNYISLKEKNIL 228


>gi|309781502|ref|ZP_07676238.1| DNA repair protein RadC [Ralstonia sp. 5_7_47FAA]
 gi|308919915|gb|EFP65576.1| DNA repair protein RadC [Ralstonia sp. 5_7_47FAA]
          Length = 224

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/94 (41%), Positives = 58/94 (61%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FLD  + LIA E   RGT+    VY REI +R L  +A ++IL HNHP+GN  PS++D+ 
Sbjct: 129 FLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDVI 188

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           +T+ +   L  L++IV DH+I+G++    F    
Sbjct: 189 LTRELRRALAMLDVIVLDHMIVGRNHVYGFLEHG 222


>gi|282916921|ref|ZP_06324679.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus D139]
 gi|283770726|ref|ZP_06343618.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus H19]
 gi|282319408|gb|EFB49760.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus D139]
 gi|283460873|gb|EFC07963.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus H19]
          Length = 228

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNVVIKESCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG + F S      
Sbjct: 188 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223


>gi|27383464|ref|NP_774994.1| hypothetical protein pCTX-M3_035 [Citrobacter freundii]
 gi|27261317|gb|AAN87658.1| putative protein [Citrobacter freundii]
          Length = 149

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 57/96 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FL+ HN +IA E   +GTI  V V+ R ++QR L  +A +++L HNHPS N  PS AD  
Sbjct: 54  FLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTAPSQADKL 113

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ +   L  +++ V DH+I+G     SF    +I
Sbjct: 114 ITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGLI 149


>gi|294054448|ref|YP_003548106.1| DNA repair protein RadC [Coraliomargarita akajimensis DSM 45221]
 gi|293613781|gb|ADE53936.1| DNA repair protein RadC [Coraliomargarita akajimensis DSM 45221]
          Length = 239

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 7/104 (6%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD+ N L+ +   S GT        RE+ +  + L+AT+II  HNHPSG+P PS ADI
Sbjct: 136 LCLDRKNRLLREFEVSSGTATAALASPREVYREAIRLNATAIIAAHNHPSGDPAPSRADI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-------KDAFVSFKGLRII 97
            +T+ +      L + + DH+I+G          + SF    +I
Sbjct: 196 QVTRQLREAGKALQVELLDHVILGQPGKDPQGLGYYSFNDAGLI 239


>gi|225847877|ref|YP_002728040.1| DNA repair protein RadC [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643861|gb|ACN98911.1| DNA repair protein RadC [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 229

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N LIA EV ++G+++ V V  R+I+   L+ +   II+ HNHP+G+  PS+ DI
Sbjct: 133 IYLNSSNELIAKEVIAKGSLNVVRVLPRDILYYGLKHNCNGIIIAHNHPNGSSKPSEEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N T+ +      +   + DHII+GK+ + SF    +I
Sbjct: 193 NFTKKLSQLALEMGFELLDHIIVGKNDYFSFAEKGLI 229


>gi|167745627|ref|ZP_02417754.1| hypothetical protein ANACAC_00319 [Anaerostipes caccae DSM 14662]
 gi|317472772|ref|ZP_07932083.1| DNA repair protein RadC [Anaerostipes sp. 3_2_56FAA]
 gi|167654939|gb|EDR99068.1| hypothetical protein ANACAC_00319 [Anaerostipes caccae DSM 14662]
 gi|316899691|gb|EFV21694.1| DNA repair protein RadC [Anaerostipes sp. 3_2_56FAA]
          Length = 232

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +  +  N +I +   S GT++      RE+    L+  A  +IL+HNHPSG+P PS  D+
Sbjct: 136 ILFNGKNKVIKELKVSVGTVNQTVASPREVFLEALKYEAVYLILLHNHPSGDPTPSRQDV 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ I      L I + DHIIIG  ++VSFK  +++
Sbjct: 196 SVTKRIKEAGELLGIYLSDHIIIGDRSYVSFKEQQLL 232


>gi|216967844|ref|YP_002333352.1| hypothetical protein pCTXM360_p71 [Klebsiella pneumoniae]
 gi|215398016|gb|ACJ65293.1| hypothetical protein [Klebsiella pneumoniae]
          Length = 149

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 57/96 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FL+ HN +IA E   +GTI  V V+ R ++QR L  +A +++L HNHPS N  PS AD  
Sbjct: 54  FLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTAPSQADKL 113

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ +   L  +++ V DH+I+G     SF    +I
Sbjct: 114 ITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGLI 149


>gi|329896524|ref|ZP_08271582.1| DNA repair protein RadC [gamma proteobacterium IMCC3088]
 gi|328921741|gb|EGG29114.1| DNA repair protein RadC [gamma proteobacterium IMCC3088]
          Length = 210

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N ++  +    GT+D   VY REIV   L++ A +II+ HNHPSG+  PSDAD 
Sbjct: 114 LYLDVRNQVLKVDTLFSGTVDAASVYPREIVSTALQVGAVNIIIAHNHPSGSSQPSDADH 173

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH+++G+  F SF     +
Sbjct: 174 RVTEKVRQALGLVDICLLDHLVLGQGEFFSFAKAGFL 210


>gi|227872346|ref|ZP_03990699.1| possible DNA repair protein RadC [Oribacterium sinus F0268]
 gi|227841810|gb|EEJ52087.1| possible DNA repair protein RadC [Oribacterium sinus F0268]
          Length = 229

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    L+ D + S+G+ +   +  REI    L  ++   ILVHNHPSG+P+PS  D 
Sbjct: 133 LFLDTKAQLLKDFLLSKGSSNASILSGREIFMEALRAASVCFILVHNHPSGDPHPSREDE 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ I      L I + DHIIIG + + SFK    I
Sbjct: 193 RATEEIYKAGEYLGIHLMDHIIIGDNQYYSFKEQGKI 229


>gi|206603634|gb|EDZ40114.1| DNA repair protein (RadC) [Leptospirillum sp. Group II '5-way CG']
          Length = 237

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 52/95 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD+ + L      S G++    V+ RE  Q  +  SA +++ VHNHPSG+P PS  D 
Sbjct: 135 LLLDQRHRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDPEPSSDDW 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           ++T+ +      L I V DH+++G  A+VS +   
Sbjct: 195 SLTERLKECGELLGIRVLDHVVLGDHAWVSLEERG 229


>gi|163814086|ref|ZP_02205478.1| hypothetical protein COPEUT_00239 [Coprococcus eutactus ATCC 27759]
 gi|158450535|gb|EDP27530.1| hypothetical protein COPEUT_00239 [Coprococcus eutactus ATCC 27759]
          Length = 264

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  D  + LI D   S GT++   +  RE+  + L+  A  IILVHNHPSG+P PS  DI
Sbjct: 160 LMFDSKHKLIKDVRISEGTVNSSMLSPREVFVQALKYEAVFIILVHNHPSGDPTPSGEDI 219

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T  I    + + I + DHII+G + +VS     I
Sbjct: 220 DITYRISDAGSMIGIDLSDHIILGNNCYVSLAERGI 255


>gi|238020847|ref|ZP_04601273.1| hypothetical protein GCWU000324_00742 [Kingella oralis ATCC 51147]
 gi|237867827|gb|EEP68833.1| hypothetical protein GCWU000324_00742 [Kingella oralis ATCC 51147]
          Length = 230

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD +N L+A E  +RGT+     Y REI +  L+  A ++I  HNHPSG+  PS AD 
Sbjct: 128 LFLDANNHLLAAEEIARGTLSESVAYPREIARFALQHHAAAVIFAHNHPSGSLKPSPADF 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             TQ +   L  L+I++ DHII+   A VSF     +
Sbjct: 188 AFTQRLHAALALLDIVLLDHIIVTAAATVSFTQQGWL 224


>gi|227484623|ref|ZP_03914939.1| DNA repair protein RadC [Anaerococcus lactolyticus ATCC 51172]
 gi|227237343|gb|EEI87358.1| DNA repair protein RadC [Anaerococcus lactolyticus ATCC 51172]
          Length = 226

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I+ E+ S G +    V  RE+ +  ++ SA S+IL HNHPSGNP+PS AD+
Sbjct: 130 ILLNNKNEVISKELISIGDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSGNPSPSKADL 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +I     L+I V DH+IIG   +VS K    I
Sbjct: 190 LITHRLIDAGEILDITVLDHLIIGHGTYVSLKKDNYI 226


>gi|329954884|ref|ZP_08295901.1| DNA repair protein RadC [Bacteroides clarus YIT 12056]
 gi|328526988|gb|EGF53999.1| DNA repair protein RadC [Bacteroides clarus YIT 12056]
          Length = 148

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N ++   + S G I    V +R I+Q  L  ++ +IIL HNHPSGN  PS  D+
Sbjct: 52  LFLNQSNQVLGYTLISEGGITDTTVDVRVILQAALLTNSVAIILAHNHPSGNTKPSRQDM 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I V DH+I+    + SF     +
Sbjct: 112 EITKQVKEAARLMRITVTDHLILTDAGYYSFADEGQL 148


>gi|187736713|ref|YP_001840970.1| hypothetical protein pEspB_p16 [Exiguobacterium arabatum]
 gi|183223746|emb|CAQ35231.1| hypothetical protein [Exiguobacterium arabatum]
          Length = 249

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I       G+++   V+ REI +  +  +A+ II  H HPSG+P+PS  DI
Sbjct: 151 IMLNTKNRVIGVHRAHVGSVNSSVVHPREIFKCAILNNASCIIACHQHPSGDPSPSREDI 210

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
            +++ +    + + I V DH+I+G  +++VS K    +
Sbjct: 211 LVSERLHEAGDLIGIPVLDHLILGADESYVSMKQRGYM 248


>gi|167569090|ref|ZP_02361964.1| DNA repair protein RadC [Burkholderia oklahomensis C6786]
          Length = 221

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 125 LFLDARHRLLRTEETAHGSLTRMAVYPREIVRRALSLNAAALIVAHNHPSGAVRPSAADR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH ++G +   SF     I
Sbjct: 185 RLTRVLRDALALIDVRLMDHFVVGANDTFSFAQAGWI 221


>gi|227535259|ref|ZP_03965308.1| DNA repair protein (RadC) [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227187143|gb|EEI67210.1| DNA repair protein (RadC) [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 229

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/92 (39%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I +++ + GT+D      R + +  L+LSAT++I+VHNHPSG+P+PS AD 
Sbjct: 131 LFLDVKNQIITEQIAAIGTVDSAMADPRIVFREALKLSATNLIMVHNHPSGDPSPSQADR 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + T         L + + DH+I+G + + SF 
Sbjct: 191 DTTTRFQLAAALLGMHLIDHLIVGGERYYSFA 222


>gi|331269058|ref|YP_004395550.1| DNA repair protein [Clostridium botulinum BKT015925]
 gi|329125608|gb|AEB75553.1| DNA repair protein [Clostridium botulinum BKT015925]
          Length = 221

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  NI+IA +  S G+++   V+ REI    ++ ++ SII+ HNHPSG   PS  DI
Sbjct: 125 IMLNTKNIVIACKDISIGSLNSTIVHPREIFSYAIKKNSASIIICHNHPSGVCTPSSEDI 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +      L + + DH+IIG   ++S K   I+
Sbjct: 185 DVTIRLKKCSEILGVNLLDHLIIGHGNYISLKEKNIL 221


>gi|254420570|ref|ZP_05034294.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
 gi|196186747|gb|EDX81723.1| DNA repair protein RadC [Brevundimonas sp. BAL3]
          Length = 192

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/97 (46%), Positives = 72/97 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ NIL+ DE+ + G++DH PVY RE+++R LELSA+++IL+HNHPSG+P PS ADI
Sbjct: 96  LYLDRRNILMRDELVADGSVDHAPVYPREVIRRALELSASALILLHNHPSGDPAPSQADI 155

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++       + VHDH+I+G++   S + L ++
Sbjct: 156 VVTKQVVDAAKLFGLQVHDHLIVGREGTASLRALGLV 192


>gi|15676925|ref|NP_274072.1| DNA repair protein RadC [Neisseria meningitidis MC58]
 gi|304387460|ref|ZP_07369651.1| DNA repair protein RadC [Neisseria meningitidis ATCC 13091]
 gi|13431810|sp|Q9JZI3|Y1038_NEIMB RecName: Full=UPF0758 protein NMB1038
 gi|7226278|gb|AAF41437.1| DNA repair protein RadC [Neisseria meningitidis MC58]
 gi|304338553|gb|EFM04672.1| DNA repair protein RadC [Neisseria meningitidis ATCC 13091]
 gi|308389364|gb|ADO31684.1| putative DNA repair protein [Neisseria meningitidis alpha710]
 gi|325128326|gb|EGC51210.1| DNA repair protein RadC [Neisseria meningitidis N1568]
 gi|325130285|gb|EGC53052.1| DNA repair protein RadC [Neisseria meningitidis OX99.30304]
 gi|325202038|gb|ADY97492.1| DNA repair protein RadC [Neisseria meningitidis M01-240149]
 gi|325204253|gb|ADY99706.1| DNA repair protein RadC [Neisseria meningitidis M01-240355]
 gi|325208209|gb|ADZ03661.1| DNA repair protein RadC [Neisseria meningitidis NZ-05/33]
          Length = 225

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQSVCSFRQLGLM 224


>gi|329733266|gb|EGG69603.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 21193]
          Length = 228

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG + F S      
Sbjct: 188 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223


>gi|21283333|ref|NP_646421.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus MW2]
 gi|49486487|ref|YP_043708.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650533|ref|YP_186546.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus COL]
 gi|151221767|ref|YP_001332589.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|253317195|ref|ZP_04840408.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|258443688|ref|ZP_05692027.1| DNA repair protein RadC [Staphylococcus aureus A8115]
 gi|282893157|ref|ZP_06301391.1| DNA repair protein radC [Staphylococcus aureus A8117]
 gi|282920202|ref|ZP_06327927.1| DNA repair protein radC [Staphylococcus aureus A9765]
 gi|284024710|ref|ZP_06379108.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 132]
 gi|294848683|ref|ZP_06789429.1| DNA repair protein radC [Staphylococcus aureus A9754]
 gi|297207625|ref|ZP_06924060.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300911707|ref|ZP_07129151.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus TCH70]
 gi|25009019|sp|Q8NW77|Y1604_STAAW RecName: Full=UPF0758 protein MW1604
 gi|54036222|sp|Q6G8R5|Y1589_STAAS RecName: Full=UPF0758 protein SAS1589
 gi|81694333|sp|Q5HFB1|Y1707_STAAC RecName: Full=UPF0758 protein SACOL1707
 gi|229485562|sp|A6QHJ5|Y1555_STAAE RecName: Full=UPF0758 protein NWMN_1555
 gi|21204773|dbj|BAB95469.1| MW1604 [Staphylococcus aureus subsp. aureus MW2]
 gi|49244930|emb|CAG43391.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284719|gb|AAW36813.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus COL]
 gi|150374567|dbj|BAF67827.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|257851094|gb|EEV75037.1| DNA repair protein RadC [Staphylococcus aureus A8115]
 gi|282594550|gb|EFB99535.1| DNA repair protein radC [Staphylococcus aureus A9765]
 gi|282764475|gb|EFC04601.1| DNA repair protein radC [Staphylococcus aureus A8117]
 gi|294824709|gb|EFG41132.1| DNA repair protein radC [Staphylococcus aureus A9754]
 gi|296887642|gb|EFH26540.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300887128|gb|EFK82329.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus TCH70]
 gi|312830039|emb|CBX34881.1| DNA repair protein RadC family protein [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315198645|gb|EFU28973.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140460|gb|EFW32314.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143999|gb|EFW35768.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329728423|gb|EGG64860.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 21189]
          Length = 228

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG + F S      
Sbjct: 188 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223


>gi|253732311|ref|ZP_04866476.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253734554|ref|ZP_04868719.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257425777|ref|ZP_05602201.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257433760|ref|ZP_05610118.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus E1410]
 gi|257436676|ref|ZP_05612720.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus M876]
 gi|282914458|ref|ZP_06322244.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus M899]
 gi|282919427|ref|ZP_06327162.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus C427]
 gi|282924804|ref|ZP_06332470.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus C101]
 gi|293510550|ref|ZP_06669255.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus M809]
 gi|253723949|gb|EES92678.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253727495|gb|EES96224.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257271471|gb|EEV03617.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257281853|gb|EEV11990.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus E1410]
 gi|257284027|gb|EEV14150.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus M876]
 gi|282313170|gb|EFB43566.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus C101]
 gi|282317237|gb|EFB47611.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus C427]
 gi|282321639|gb|EFB51964.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus M899]
 gi|283470928|emb|CAQ50139.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ST398]
 gi|291466441|gb|EFF08962.1| DNA repair protein radC [Staphylococcus aureus subsp. aureus M809]
 gi|312437880|gb|ADQ76951.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus TCH60]
          Length = 228

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG + F S      
Sbjct: 188 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223


>gi|146310139|ref|YP_001175213.1| DNA repair protein RadC [Enterobacter sp. 638]
 gi|145317015|gb|ABP59162.1| DNA repair protein RadC [Enterobacter sp. 638]
          Length = 157

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + L+  E    GT++H  V+ RE+V+  L  +A ++I+ HNHPSG  + S AD 
Sbjct: 61  MYLDNQHCLLERETLFAGTLNHTEVHAREVVKSALRHNAAAVIIAHNHPSGTTDISKADR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I   L+ + + + DH+++G    VSF     +
Sbjct: 121 VVTERIADALSLVEVRLLDHLVVGGCDVVSFAECGWL 157


>gi|239623991|ref|ZP_04667022.1| DNA repair protein RadC [Clostridiales bacterium 1_7_47_FAA]
 gi|239522022|gb|EEQ61888.1| DNA repair protein RadC [Clostridiales bacterium 1_7_47FAA]
          Length = 231

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+    LI D + SRGT++   +  REI+   L   A S++LVHNHPSG+P+PS AD+
Sbjct: 135 MFLNTKQGLIKDLLISRGTVNASVMTPREILIEALRCCAVSMVLVHNHPSGDPSPSRADL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I + DHIIIG   ++SF+  +I+
Sbjct: 195 MLTERVKEAGVLIGITLIDHIIIGDRRYLSFREQKIL 231


>gi|162147769|ref|YP_001602230.1| putative DNA repair protein radC [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209542391|ref|YP_002274620.1| DNA repair protein RadC [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786346|emb|CAP55928.1| putative DNA repair protein radC [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209530068|gb|ACI50005.1| DNA repair protein RadC [Gluconacetobacter diazotrophicus PAl 5]
          Length = 221

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 65/97 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+   LIADEV ++GTID  PVY RE+++R ++L A+ +ILVHNHP  NP PS  DI
Sbjct: 125 LFLDRGTRLIADEVLAQGTIDQTPVYPREVMRRAIQLKASELILVHNHPGWNPTPSREDI 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +      L + V DH+I+G  A +SF+   ++
Sbjct: 185 AMTRRLAQIATVLGLTVRDHVIVGNGASISFRQAGLL 221


>gi|229002805|ref|ZP_04160699.1| DNA repair protein [Bacillus mycoides Rock3-17]
 gi|228758442|gb|EEM07595.1| DNA repair protein [Bacillus mycoides Rock3-17]
          Length = 150

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 55/95 (57%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +I   +  RGT+D   V+ RE  +  +  +ATSI+  HNHPSG+   S  DI +
Sbjct: 56  LNTKNEIIGCSIVFRGTVDSSLVHARETFRTAILNNATSILCFHNHPSGSSVESSEDIEV 115

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +    + + I + DH+IIG ++FVS K   II
Sbjct: 116 TKRLKECGDIIGIPLLDHVIIGDNSFVSLKSKGII 150


>gi|312170956|emb|CBX79215.1| DNA repair protein radC homolog [Erwinia amylovora ATCC BAA-2158]
          Length = 107

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + L+  E    GT+ H  V+ RE+V+  L+ +A ++IL HNHPSG    S  D 
Sbjct: 12  MYLDNQHCLLGCETLFTGTLSHTEVHPREVVKLALKHNAAAVILAHNHPSGTREISQQDK 71

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ I+  L  + + V DH+++G +  VSF    ++
Sbjct: 72  HITQRIVKALALVEVRVLDHLVVG-NEVVSFAEQGLL 107


>gi|300811346|ref|ZP_07091843.1| DNA repair protein RadC [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497710|gb|EFK32735.1| DNA repair protein RadC [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 204

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 52/96 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+ D+   L+ +++  +GT+D   V+ REI +  +     SII+ HNHPSG   PSD D+
Sbjct: 108 LYFDQQQNLLGEKMLFQGTLDRSWVHPREIFRWAMVYGCASIIVAHNHPSGALTPSDNDL 167

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +      + I   DH IIG   ++S +   +
Sbjct: 168 ELTKGLKKASKIMKITFLDHFIIGGGEYLSLREREL 203


>gi|68248652|ref|YP_247764.1| putative DNA repair radC-like protein [Haemophilus influenzae
           86-028NP]
 gi|68056851|gb|AAX87104.1| putative DNA repair radC-like protein [Haemophilus influenzae
           86-028NP]
 gi|309750579|gb|ADO80563.1| putative DNA repair protein [Haemophilus influenzae R2866]
          Length = 156

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ + LI  EV  +G++    V IREI+++ L+L+A++II+ HNHP+GN  PSDAD 
Sbjct: 60  LFLDRIHRLIKSEVMFQGSVSETSVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      ++I + DH I+   A   F    +I
Sbjct: 120 YITKRLKEACELMDIKLLDHFIVSGSASFCFTDNHLI 156


>gi|255308168|ref|ZP_05352339.1| DNA repair protein RadC [Clostridium difficile ATCC 43255]
          Length = 153

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 1/95 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N  ++ E+ S GT++   V+ RE+ +  +  +A+ II  HNHPSGN N S  D 
Sbjct: 56  VYLDTKNQPVSIEIVSIGTVNSAMVHPREVFKVAVLSNASKIICFHNHPSGNTNFSKEDE 115

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGL 94
            +T+ +      L I + DHI++G D  + SFK  
Sbjct: 116 VITKRLQKCGEILGIELVDHIVVGDDDKYFSFKEN 150


>gi|325136246|gb|EGC58854.1| DNA repair protein RadC [Neisseria meningitidis M0579]
          Length = 225

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQSVCSFRQLGLM 224


>gi|254995210|ref|ZP_05277400.1| DNA repair protein (radC) [Anaplasma marginale str. Mississippi]
          Length = 230

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 65/97 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   +IADE+Q+ GTID  P+Y+RE+V++ L   A+ I++ HNHPSG+P PS ADI
Sbjct: 134 LYLNKKYRIIADEIQNTGTIDEAPLYVREVVKKSLLHDASYIVVSHNHPSGDPKPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +      +NI++ DH+II      SFK   ++
Sbjct: 194 HITNRLQEACCSMNIVLVDHVIITPKRHYSFKTNGLL 230


>gi|330993528|ref|ZP_08317463.1| UPF0758 protein [Gluconacetobacter sp. SXCC-1]
 gi|329759558|gb|EGG76067.1| UPF0758 protein [Gluconacetobacter sp. SXCC-1]
          Length = 223

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+   L+ADE+   GT++H PVY REI++R L L A  ++L HNHP+G   PS ADI
Sbjct: 126 LFLDEGFHLLADELMGTGTVNHSPVYPREIMRRALRLGAARLVLAHNHPAGRAEPSGADI 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      + + VHDHII+G    +SF+   ++
Sbjct: 186 EMTLRIAQLGRLMRVEVHDHIIVGNGRTLSFRAAGLL 222


>gi|258542143|ref|YP_003187576.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01]
 gi|256633221|dbj|BAH99196.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01]
 gi|256636280|dbj|BAI02249.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-03]
 gi|256639333|dbj|BAI05295.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-07]
 gi|256642389|dbj|BAI08344.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-22]
 gi|256645444|dbj|BAI11392.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-26]
 gi|256648497|dbj|BAI14438.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-32]
 gi|256651550|dbj|BAI17484.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654541|dbj|BAI20468.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-12]
          Length = 249

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 64/97 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + L+AD+V  +GT+DH PVY REIV R L+L+AT ++LVHNHPSG+P PS  D+
Sbjct: 153 LFLNDKHELLADDVMGQGTVDHTPVYPREIVARALQLNATMLVLVHNHPSGDPTPSADDV 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      +NI V DHII+  +  +S +    +
Sbjct: 213 VMTTQICGAAKIMNIHVWDHIIVAGEKLLSMREAGFL 249


>gi|116494746|ref|YP_806480.1| DNA repair protein [Lactobacillus casei ATCC 334]
 gi|116104896|gb|ABJ70038.1| DNA replication and repair protein RadC [Lactobacillus casei ATCC
           334]
          Length = 222

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/92 (39%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I +++ + GT+D      R + +  L+LSAT++I+VHNHPSG+P+PS AD 
Sbjct: 124 LFLDVKNQIITEQIAAIGTVDSAMADPRIVFREALKLSATNLIMVHNHPSGDPSPSQADR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + T         L + + DH+I+G + + SF 
Sbjct: 184 DTTTRFQLAAALLGMHLIDHLIVGGERYYSFA 215


>gi|325684339|gb|EGD26508.1| DNA repair protein RadC [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 206

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 52/96 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+ D+   L+ +++  +GT+D   V+ REI +  +     SII+ HNHPSG   PSD D+
Sbjct: 110 LYFDQQQNLLGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDL 169

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +      + I   DH IIG   ++S +   +
Sbjct: 170 ELTKGLKKASKIMKITFLDHFIIGGGEYLSLREREL 205


>gi|161509879|ref|YP_001575538.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|160368688|gb|ABX29659.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
          Length = 223

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+  PS  DI
Sbjct: 123 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG + F S      
Sbjct: 183 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 218


>gi|319956638|ref|YP_004167901.1| DNA replication and repair protein radc [Nitratifractor salsuginis
           DSM 16511]
 gi|319419042|gb|ADV46152.1| DNA replication and repair protein RadC [Nitratifractor salsuginis
           DSM 16511]
          Length = 219

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 47/95 (49%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  + +I       GT++   V+ RE+    +   A  II+ HNHPSG   PS  DI +
Sbjct: 125 LDGASRVIEVRTVFIGTLNQSLVHPREVFADAIADRAAGIIVAHNHPSGTLTPSRPDIAI 184

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T  +      + I + DH+I+ K+ + SF    ++
Sbjct: 185 TDRLKEVGRLVGIDLLDHVILTKEGYFSFADEGML 219


>gi|167561868|ref|ZP_02354784.1| DNA repair protein RadC [Burkholderia oklahomensis EO147]
          Length = 173

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 77  LFLDARHRLLRMEETAHGSLTRMAVYPREIVRRALSLNAAALIVAHNHPSGAVRPSAADR 136

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH ++G     SF     I
Sbjct: 137 RLTRVLRDALALIDVRLMDHFVVGASDTFSFAQAGWI 173


>gi|255067544|ref|ZP_05319399.1| DNA repair protein RadC [Neisseria sicca ATCC 29256]
 gi|255048165|gb|EET43629.1| DNA repair protein RadC [Neisseria sicca ATCC 29256]
          Length = 226

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+I+ HNHP G+  PS +DI
Sbjct: 128 LLLNRQNRLIAMRELSRGTVAENTVYIREIVKLALDEYADSLIIAHNHPGGSATPSQSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  +   L  +++ + DH I+      S +    +
Sbjct: 188 AFTGRLKQALALVDVSLLDHFIVTAKEVCSMRERGYM 224


>gi|253681762|ref|ZP_04862559.1| DNA repair protein RadC [Clostridium botulinum D str. 1873]
 gi|253561474|gb|EES90926.1| DNA repair protein RadC [Clostridium botulinum D str. 1873]
          Length = 228

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  NI+I     S G+++   V+ RE+    ++ ++ SII+ HNHPSG   PS  DI
Sbjct: 132 IMLNTKNIVIDCRDVSIGSLNSTIVHPREVFSYAIKKNSASIIICHNHPSGVCTPSSEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      L + + DH+IIG   ++S K   I+
Sbjct: 192 DVTKRLKKCSEILGVNLLDHLIIGHGNYISLKEKNIL 228


>gi|28211693|ref|NP_782637.1| DNA repair protein RadC [Clostridium tetani E88]
 gi|54036238|sp|Q892M1|Y2075_CLOTE RecName: Full=UPF0758 protein CTC_02075
 gi|28204135|gb|AAO36574.1| DNA repair protein radC [Clostridium tetani E88]
          Length = 228

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I  +    G+++   V+ REI    ++ ++ SII+ HNHPSG+  PS  DI
Sbjct: 132 ILLNTKNYVIKVKDVFIGSLNSSIVHPREIFLEAIKNNSYSIIICHNHPSGDTTPSKEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N++  I      + I + DHIIIG   ++S K   I+
Sbjct: 192 NVSNRIKECGKLIGIELLDHIIIGNGVYISLKEKDIL 228


>gi|191638257|ref|YP_001987423.1| DNA repair protein (RadC) [Lactobacillus casei BL23]
 gi|239631658|ref|ZP_04674689.1| DNA repair protein [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066305|ref|YP_003788328.1| DNA repair protein [Lactobacillus casei str. Zhang]
 gi|190712559|emb|CAQ66565.1| DNA repair protein (RadC) [Lactobacillus casei BL23]
 gi|239526123|gb|EEQ65124.1| DNA repair protein [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300438712|gb|ADK18478.1| DNA repair protein [Lactobacillus casei str. Zhang]
 gi|327382289|gb|AEA53765.1| DNA repair protein RadC [Lactobacillus casei LC2W]
 gi|327385484|gb|AEA56958.1| DNA repair protein RadC [Lactobacillus casei BD-II]
          Length = 222

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/92 (39%), Positives = 57/92 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N +I +++ + GT+D      R + +  L+LSAT++I+VHNHPSG+P+PS AD 
Sbjct: 124 LFLDVKNQIITEQIAAIGTVDSAMADPRIVFREALKLSATNLIMVHNHPSGDPSPSQADR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           + T         L + + DH+I+G + + SF 
Sbjct: 184 DTTTRFQLAAALLGMHLIDHLIVGGERYYSFA 215


>gi|104773814|ref|YP_618794.1| DNA repair protein RadC [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116513820|ref|YP_812726.1| DNA repair protein [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|103422895|emb|CAI97557.1| DNA repair protein RadC [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116093135|gb|ABJ58288.1| DNA repair protein [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|325125478|gb|ADY84808.1| DNA repair protein [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 204

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 52/96 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+ D+   L+ +++  +GT+D   V+ REI +  +     SII+ HNHPSG   PSD D+
Sbjct: 108 LYFDQQQNLLGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDL 167

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +      + I   DH IIG   ++S +   +
Sbjct: 168 ELTKGLKKASKIMKITFLDHFIIGGGEYLSLREREL 203


>gi|256827872|ref|YP_003156600.1| DNA repair protein RadC [Desulfomicrobium baculatum DSM 4028]
 gi|256577048|gb|ACU88184.1| DNA repair protein RadC [Desulfomicrobium baculatum DSM 4028]
          Length = 226

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + +D  N LI+ E   +GT+D    Y REI++  L   A  +ILVHNHP GNP PS  D 
Sbjct: 130 ILVDNQNRLISFERVFQGTVDQTAAYPREILELALRHHAGGLILVHNHPGGNPVPSSQDK 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I    + L + + DHII+  + + SF+   ++
Sbjct: 190 ALTETIARLADDLGLRLLDHIIVTAETYSSFRAQGLL 226


>gi|225027645|ref|ZP_03716837.1| hypothetical protein EUBHAL_01904 [Eubacterium hallii DSM 3353]
 gi|224954959|gb|EEG36168.1| hypothetical protein EUBHAL_01904 [Eubacterium hallii DSM 3353]
          Length = 242

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + L+ + + S+GT +   V +R I    L   A  +IL+HNHPSG P PS  D+
Sbjct: 146 LLLDGRHRLMKEILLSKGTANSSWVPVRTIFVEALRYEAVYMILIHNHPSGCPEPSREDL 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      L I + DHIIIG   + S +  +++
Sbjct: 206 VITKQIKEAGELLGIPLSDHIIIGDKCYTSLREQQMM 242


>gi|124516759|gb|EAY58267.1| DNA repair protein (RadC) [Leptospirillum rubarum]
          Length = 237

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 52/95 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD+ + L      S G++    V+ RE  Q  +  SA +++ VHNHPSG+P PS  D 
Sbjct: 135 LLLDQRHRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDPEPSSDDW 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           ++T+ +      L I V DH+++G  A+VS +   
Sbjct: 195 SLTERLKECGELLGIRVLDHVVLGDHAWVSLEERG 229


>gi|228931411|ref|ZP_04094336.1| DNA repair protein [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228828217|gb|EEM73927.1| DNA repair protein [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
          Length = 150

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 53/95 (55%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +I   +   GT+D   V+ RE  +  +  +A+SII  HNHPSG+   S  D+ +
Sbjct: 56  LNTKNEIIGCSIVFEGTVDSSLVHPRETFRTAILNNASSIICFHNHPSGHSMESHEDVEV 115

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +    N + I + DH+IIG +++VS     II
Sbjct: 116 TKRLKECGNIIGIPLLDHVIIGDNSYVSLMKKGII 150


>gi|313123429|ref|YP_004033688.1| DNA repair protein [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312279992|gb|ADQ60711.1| DNA repair protein [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 204

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 52/96 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+ D+   L+ +++  +GT+D   V+ REI +  +     SII+ HNHPSG   PSD D+
Sbjct: 108 LYFDQQQNLLGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDL 167

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +      + I   DH IIG   ++S +   +
Sbjct: 168 ELTKGLKKASKIMKITFLDHFIIGGGEYLSLREREL 203


>gi|298694931|gb|ADI98153.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ED133]
          Length = 228

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNVVIKESCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG + F S      
Sbjct: 188 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223


>gi|293604225|ref|ZP_06686633.1| DNA repair protein RadC [Achromobacter piechaudii ATCC 43553]
 gi|292817450|gb|EFF76523.1| DNA repair protein RadC [Achromobacter piechaudii ATCC 43553]
          Length = 225

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 52/95 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    +IA    +RGT+    VY RE+V+  L   A ++I+ HNHPSG   PS AD 
Sbjct: 129 LYLDNQLRVIATGELARGTLSQASVYPREVVREALRHHAAALIVAHNHPSGLAEPSAADR 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
             TQ +   L  +++ + DH+I+   A +S   L 
Sbjct: 189 GFTQQLKQALALVDVKLVDHLIVAGAAVISMAELG 223


>gi|167752470|ref|ZP_02424597.1| hypothetical protein ALIPUT_00721 [Alistipes putredinis DSM 17216]
 gi|167659539|gb|EDS03669.1| hypothetical protein ALIPUT_00721 [Alistipes putredinis DSM 17216]
          Length = 214

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +  S+G +    V  R +++R LEL AT IILVHNHPSG   PS+ D 
Sbjct: 117 LYLNTGNRIVERQRVSQGGVQATVVDHRLVIKRALELLATQIILVHNHPSGAALPSEQDK 176

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I       +I + DH+II +    SF+   ++
Sbjct: 177 ILTKKIAEAAALFDIRLLDHLIIARGGEYSFRQSGLL 213


>gi|222100114|ref|YP_002534682.1| DNA repair protein radC like protein [Thermotoga neapolitana DSM
           4359]
 gi|221572504|gb|ACM23316.1| DNA repair protein radC like protein [Thermotoga neapolitana DSM
           4359]
          Length = 209

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD+   ++++ V + GT D   V+ R++ +  +  +A+ +I+VHNHPSG+P PS  D 
Sbjct: 113 VCLDRRLNVLSESVITVGTSDRSLVHPRDVFRVAIRSNASGVIVVHNHPSGDPTPSKEDR 172

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+N+      L I + DH+II K  + SF+    I
Sbjct: 173 AITKNLKRVGEILGIELVDHVIISKRGYYSFREEGEI 209


>gi|187925122|ref|YP_001896764.1| DNA repair protein RadC [Burkholderia phytofirmans PsJN]
 gi|238689615|sp|B2T6H6|Y3148_BURPP RecName: Full=UPF0758 protein Bphyt_3148
 gi|187716316|gb|ACD17540.1| DNA repair protein RadC [Burkholderia phytofirmans PsJN]
          Length = 259

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 58/96 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  ++GT+  + VY REIV+R L L+A S+I+ HNHPSG   PS +D 
Sbjct: 163 LFLDARHRLIHCEESAQGTLTRMAVYPREIVRRALSLNAASLIVAHNHPSGAVQPSASDC 222

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T  +   L  +++ + DH+++G D+  SF     
Sbjct: 223 RLTHTLRDALTLIDVQLVDHLVVGVDSVYSFARAGW 258


>gi|59801108|ref|YP_207820.1| DNA repair protein RadC [Neisseria gonorrhoeae FA 1090]
 gi|194098788|ref|YP_002001850.1| DNA repair protein RadC [Neisseria gonorrhoeae NCCP11945]
 gi|239999080|ref|ZP_04719004.1| DNA repair protein RadC [Neisseria gonorrhoeae 35/02]
 gi|240014013|ref|ZP_04720926.1| DNA repair protein RadC [Neisseria gonorrhoeae DGI18]
 gi|240016454|ref|ZP_04722994.1| DNA repair protein RadC [Neisseria gonorrhoeae FA6140]
 gi|240080573|ref|ZP_04725116.1| DNA repair protein RadC [Neisseria gonorrhoeae FA19]
 gi|240113058|ref|ZP_04727548.1| DNA repair protein RadC [Neisseria gonorrhoeae MS11]
 gi|240115813|ref|ZP_04729875.1| DNA repair protein RadC [Neisseria gonorrhoeae PID18]
 gi|240118111|ref|ZP_04732173.1| DNA repair protein RadC [Neisseria gonorrhoeae PID1]
 gi|240121579|ref|ZP_04734541.1| DNA repair protein RadC [Neisseria gonorrhoeae PID24-1]
 gi|240123661|ref|ZP_04736617.1| DNA repair protein RadC [Neisseria gonorrhoeae PID332]
 gi|240125851|ref|ZP_04738737.1| DNA repair protein RadC [Neisseria gonorrhoeae SK-92-679]
 gi|240128360|ref|ZP_04741021.1| DNA repair protein RadC [Neisseria gonorrhoeae SK-93-1035]
 gi|254493858|ref|ZP_05107029.1| DNA repair protein [Neisseria gonorrhoeae 1291]
 gi|260440370|ref|ZP_05794186.1| DNA repair protein RadC [Neisseria gonorrhoeae DGI2]
 gi|268594918|ref|ZP_06129085.1| DNA repair protein RadC [Neisseria gonorrhoeae 35/02]
 gi|268596703|ref|ZP_06130870.1| DNA repair protein RadC [Neisseria gonorrhoeae FA19]
 gi|268599142|ref|ZP_06133309.1| DNA repair protein RadC [Neisseria gonorrhoeae MS11]
 gi|268601488|ref|ZP_06135655.1| DNA repair protein RadC [Neisseria gonorrhoeae PID18]
 gi|268603826|ref|ZP_06137993.1| DNA repair protein RadC [Neisseria gonorrhoeae PID1]
 gi|268682290|ref|ZP_06149152.1| DNA repair protein RadC [Neisseria gonorrhoeae PID332]
 gi|268684448|ref|ZP_06151310.1| DNA repair protein [Neisseria gonorrhoeae SK-92-679]
 gi|268686758|ref|ZP_06153620.1| DNA repair protein RadC [Neisseria gonorrhoeae SK-93-1035]
 gi|291043667|ref|ZP_06569383.1| DNA repair protein RadC [Neisseria gonorrhoeae DGI2]
 gi|293398970|ref|ZP_06643135.1| DNA repair protein radC [Neisseria gonorrhoeae F62]
 gi|73913737|sp|Q5F8S9|Y681_NEIG1 RecName: Full=UPF0758 protein NGO0681
 gi|238690211|sp|B4RM65|Y1225_NEIG2 RecName: Full=UPF0758 protein NGK_1225
 gi|59718003|gb|AAW89408.1| putative DNA repair protein [Neisseria gonorrhoeae FA 1090]
 gi|193934078|gb|ACF29902.1| putative DNA repair protein [Neisseria gonorrhoeae NCCP11945]
 gi|226512898|gb|EEH62243.1| DNA repair protein [Neisseria gonorrhoeae 1291]
 gi|268548307|gb|EEZ43725.1| DNA repair protein RadC [Neisseria gonorrhoeae 35/02]
 gi|268550491|gb|EEZ45510.1| DNA repair protein RadC [Neisseria gonorrhoeae FA19]
 gi|268583273|gb|EEZ47949.1| DNA repair protein RadC [Neisseria gonorrhoeae MS11]
 gi|268585619|gb|EEZ50295.1| DNA repair protein RadC [Neisseria gonorrhoeae PID18]
 gi|268587957|gb|EEZ52633.1| DNA repair protein RadC [Neisseria gonorrhoeae PID1]
 gi|268622574|gb|EEZ54974.1| DNA repair protein RadC [Neisseria gonorrhoeae PID332]
 gi|268624732|gb|EEZ57132.1| DNA repair protein [Neisseria gonorrhoeae SK-92-679]
 gi|268627042|gb|EEZ59442.1| DNA repair protein RadC [Neisseria gonorrhoeae SK-93-1035]
 gi|291012130|gb|EFE04119.1| DNA repair protein RadC [Neisseria gonorrhoeae DGI2]
 gi|291610384|gb|EFF39494.1| DNA repair protein radC [Neisseria gonorrhoeae F62]
 gi|317164372|gb|ADV07913.1| DNA repair protein RadC [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 225

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+      SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQTVRSFRQLGLM 224


>gi|87161721|ref|YP_494303.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195464|ref|YP_500268.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|109940132|sp|P31337|Y1763_STAA8 RecName: Full=UPF0758 protein SAOUHSC_01763; AltName: Full=25 kDa
           protein
 gi|123485497|sp|Q2FG75|Y1608_STAA3 RecName: Full=UPF0758 protein SAUSA300_1608
 gi|87127695|gb|ABD22209.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203022|gb|ABD30832.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
          Length = 218

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+  PS  DI
Sbjct: 118 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG + F S      
Sbjct: 178 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 213


>gi|32476078|ref|NP_869072.1| DNA repair protein [Rhodopirellula baltica SH 1]
 gi|32446622|emb|CAD76458.1| DNA repair protein [Rhodopirellula baltica SH 1]
          Length = 319

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 50/91 (54%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  +  I     + GT+D   V+ RE+ +  +  +A +++LVHNHPSG+P PS  D  +
Sbjct: 228 LDTKHKPIRTHRITVGTLDSSLVHPREVFRPAIRDAAAAVLLVHNHPSGDPTPSREDHAV 287

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           T+ +      + I V DHI++ K   +S + 
Sbjct: 288 TERLTEAGKLIGITVLDHIVVAKQRCLSLRE 318


>gi|283769057|ref|ZP_06341963.1| putative DNA repair protein RadC [Bulleidia extructa W1219]
 gi|283104414|gb|EFC05791.1| putative DNA repair protein RadC [Bulleidia extructa W1219]
          Length = 223

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL     +++ ++   GTI+   V+ REI +  L L++ +IILVHNHPSGN +PS  DI
Sbjct: 127 VFLASDQRVLSYKILFVGTINASMVFPREIFKEALLLNSPNIILVHNHPSGNLSPSQEDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ I      + + V DHII+ +  + SF    I
Sbjct: 187 SLTKRIKEAGQLMGVKVLDHIIVTQSDYFSFVQEGI 222


>gi|149371609|ref|ZP_01891025.1| putative DNA repair protein [unidentified eubacterium SCB49]
 gi|149355236|gb|EDM43796.1| putative DNA repair protein [unidentified eubacterium SCB49]
          Length = 232

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N ++     S+G I    V +R   +  LE+ A +IIL HNHPSG   PS AD 
Sbjct: 136 IYLNNSNKILRKMQLSKGGITGTLVDVRLAFKNALEIGAVAIILAHNHPSGTLKPSVADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ I T    L++ V DH+II + A+ SF    +I
Sbjct: 196 NLTEKIKTAGLSLDVKVLDHVIITEQAYFSFADEGLI 232


>gi|73662414|ref|YP_301195.1| putative DNA repair protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123642774|sp|Q49Y92|Y1105_STAS1 RecName: Full=UPF0758 protein SSP1105
 gi|72494929|dbj|BAE18250.1| putative DNA repair protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 226

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  NI+I  +    GT++   V+ REI    ++ ++ +II++HNHPSG+  PS  DI
Sbjct: 128 LFLNSKNIIIKQKTIFMGTLNSAIVHPREIYSEAVKCASNAIIVLHNHPSGDTTPSLEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +    + L I + DH+IIG   ++S      
Sbjct: 188 KTTDRLRECGDILGIQLLDHVIIGDHTYLSMVEEGY 223


>gi|290580506|ref|YP_003484898.1| putative DNA repair protein [Streptococcus mutans NN2025]
 gi|254997405|dbj|BAH88006.1| putative DNA repair protein [Streptococcus mutans NN2025]
          Length = 226

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 55/94 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +V   G++       REI+    +  ATS+I+VHNHPSG+  PS+ D+
Sbjct: 129 IYLDTQNRVIKKQVIFIGSVRRSVAEPREILHYACKSMATSLIIVHNHPSGSTYPSENDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ I  + + L I+  DHII+GK  + SF+  
Sbjct: 189 RFTEKIKRSCDDLGIVFLDHIIVGKKEYYSFREE 222


>gi|116511836|ref|YP_809052.1| DNA repair protein [Lactococcus lactis subsp. cremoris SK11]
 gi|116107490|gb|ABJ72630.1| DNA repair protein [Lactococcus lactis subsp. cremoris SK11]
          Length = 217

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 48/93 (51%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD  N +I  +    G ++H     REI+   ++  +  +++ HNHPSGN  PS AD  
Sbjct: 120 YLDGQNQIIEKKTIFIGAVNHATASPREILYHAIKNLSVGLLVAHNHPSGNLQPSQADKI 179

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            T+ +    + + I   DHII+G   + SF+  
Sbjct: 180 FTKKLKNACDNIGINFIDHIIVGAGNYYSFRER 212


>gi|238762714|ref|ZP_04623683.1| DNA repair protein RadC [Yersinia kristensenii ATCC 33638]
 gi|238699019|gb|EEP91767.1| DNA repair protein RadC [Yersinia kristensenii ATCC 33638]
          Length = 156

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + L+  E    GT+ H+ V+ RE+V+  L+ +A ++IL HNHPSG    S  D 
Sbjct: 61  MYLDNQHCLLERETLFTGTLSHIEVHPREVVKSALKHNAAAVILAHNHPSGTTEISQQDK 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ I+  L  + + V DH+++G +  VSF     +
Sbjct: 121 HITQRIMKALALVEVRVLDHLVVG-NEVVSFAECGWL 156


>gi|57233728|ref|YP_182165.1| RadC family DNA repair protein [Dehalococcoides ethenogenes 195]
 gi|57224176|gb|AAW39233.1| DNA repair protein, RadC family [Dehalococcoides ethenogenes 195]
          Length = 271

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + ++       GT+    V  RE++   +  +A+++I VHNHPSG   PS AD 
Sbjct: 142 IYLDSQHRVLEVADLFSGTVASGCVIPREVIGAAISQNASALIFVHNHPSGKTEPSQADK 201

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ ++     + I   DHIIIG + + SF    ++
Sbjct: 202 DLTRELVYAAMVMKIRALDHIIIGDNCYFSFAAAGLM 238


>gi|258592223|emb|CBE68532.1| DNA repair protein radC homolog [NC10 bacterium 'Dutch sediment']
          Length = 245

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+ +N ++ +   S G++   PVY+R +V       A ++I+ HNHPSGNP PS AD 
Sbjct: 136 LLLNGNNEVLENVTASEGSLTESPVYLRNLVNLANRHQAVALIVAHNHPSGNPRPSQADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ ++     L I V DH+IIG   + SF    +I
Sbjct: 196 SLTEELVVMGRLLKIGVLDHVIIGDGCYYSFADEGLI 232


>gi|270158831|ref|ZP_06187488.1| DNA repair protein RadC [Legionella longbeachae D-4968]
 gi|289166376|ref|YP_003456514.1| DNA repair protein RadC (start is missing) [Legionella longbeachae
           NSW150]
 gi|269990856|gb|EEZ97110.1| DNA repair protein RadC [Legionella longbeachae D-4968]
 gi|288859549|emb|CBJ13514.1| DNA repair protein RadC (start is missing) [Legionella longbeachae
           NSW150]
          Length = 191

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/90 (40%), Positives = 56/90 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA +    GTI+   ++ R I++R L L+A ++IL HNHPSG  +PS  DI
Sbjct: 85  LFLDNQHRIIAYDELFSGTINTATIHPRPIIERVLRLNAAALILAHNHPSGVSDPSPQDI 144

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
            +T+ +   L  +++ + DHIIIG +   S
Sbjct: 145 AVTERMREALELVDVRLLDHIIIGDNEVYS 174


>gi|163786204|ref|ZP_02180652.1| putative DNA repair protein [Flavobacteriales bacterium ALC-1]
 gi|159878064|gb|EDP72120.1| putative DNA repair protein [Flavobacteriales bacterium ALC-1]
          Length = 232

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I     S+G I    V +R +++  LE+ AT+++L HNHPSG   PS AD 
Sbjct: 136 LYLNNSNKIIQKNQLSKGGITGTLVDVRLVLKNALEVGATALVLCHNHPSGTLKPSQADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +      L+I V DH+I+ + A+ SF    II
Sbjct: 196 DITQKLKIAAKSLDIKVLDHLIVTEKAYFSFADEEII 232


>gi|57234651|ref|YP_181315.1| RadC family DNA repair protein [Dehalococcoides ethenogenes 195]
 gi|57225099|gb|AAW40156.1| DNA repair protein, RadC family [Dehalococcoides ethenogenes 195]
          Length = 222

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI     S G++D   V+ RE+ +  L  SA ++IL HNHPSG   PS  DI
Sbjct: 126 LMLDVKSKLIRVGHISAGSLDESVVHPREVFKEALSASAATVILAHNHPSGESEPSPDDI 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            ++  +      + I V DH+IIG   F S K   ++
Sbjct: 186 GLSARLREAGGIMGIEVLDHVIIGGQTFTSLKRQGLL 222


>gi|331683685|ref|ZP_08384281.1| DNA repair protein, RADC family [Escherichia coli H299]
 gi|331078637|gb|EGI49839.1| DNA repair protein, RADC family [Escherichia coli H299]
          Length = 90

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/90 (37%), Positives = 54/90 (60%)

Query: 8  ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNII 67
           LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD  +T+ ++
Sbjct: 1  QLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLV 60

Query: 68 TTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            L  ++I V DH+I+G +   SF    ++
Sbjct: 61 QALGLVDIRVPDHLIVGGNQVFSFAEHGLL 90


>gi|160938816|ref|ZP_02086167.1| hypothetical protein CLOBOL_03710 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437779|gb|EDP15539.1| hypothetical protein CLOBOL_03710 [Clostridium bolteae ATCC
           BAA-613]
          Length = 231

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+    ++ D++ +RGT++   +  RE++   L   A S++LVHNHPSG+P PS ADI
Sbjct: 135 MFLNTKQAMVRDQIMARGTVNASVMTPREVLIEGLRCRAVSMVLVHNHPSGDPTPSRADI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    + + I + DHI+IG   ++SF+   ++
Sbjct: 195 LLTKRLKEAGDLVGITLIDHIVIGDRRYLSFREENLM 231


>gi|24379492|ref|NP_721447.1| DNA repair protein RadC [Streptococcus mutans UA159]
 gi|24377431|gb|AAN58753.1|AE014944_3 putative DNA repair protein RadC [Streptococcus mutans UA159]
          Length = 209

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 55/94 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I  +V   G++       REI+    +  ATS+I+VHNHPSG+  PS+ D+
Sbjct: 112 IYLDTQNRVIKKQVIFIGSVRRSVAEPREILHYACKSMATSLIIVHNHPSGSTYPSENDL 171

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ I  + + L I+  DHII+GK  + SF+  
Sbjct: 172 RFTEKIKRSCDDLGIVFLDHIIVGKKEYYSFREE 205


>gi|291459235|ref|ZP_06598625.1| DNA repair protein RadC [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291418489|gb|EFE92208.1| DNA repair protein RadC [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 232

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/95 (41%), Positives = 51/95 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LI D   SRGT     +  R+I +  L     SII+VHNHPSG P PS+ D 
Sbjct: 136 LYLDNQLQLIRDVQLSRGTCSSSAISPRDIFREALRNGGVSIIMVHNHPSGVPEPSEEDR 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + T  +      L I + DHII+G +A+ SFK   
Sbjct: 196 SFTAELFRLGQCLGIPLIDHIIMGDNAYYSFKEQG 230


>gi|289424005|ref|ZP_06425794.1| DNA repair protein RadC [Peptostreptococcus anaerobius 653-L]
 gi|289155580|gb|EFD04256.1| DNA repair protein RadC [Peptostreptococcus anaerobius 653-L]
          Length = 227

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/94 (42%), Positives = 60/94 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I+D   S G++++  V+ RE+    ++ SA SIIL+HNHPSGNPNPS  DI
Sbjct: 131 VLLNTKNEIISDINISIGSLNYSIVHPREVFTEAIKKSANSIILMHNHPSGNPNPSLEDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           N+T+ +  +   L I V DH+IIG+  + S K  
Sbjct: 191 NVTKRLRESGEILGIEVLDHVIIGEGVYYSLKEE 224


>gi|121634962|ref|YP_975207.1| DNA repair protein RadC [Neisseria meningitidis FAM18]
 gi|166218786|sp|A1KU78|Y1174_NEIMF RecName: Full=UPF0758 protein NMC1174
 gi|120866668|emb|CAM10420.1| putative DNA repair protein [Neisseria meningitidis FAM18]
 gi|325132546|gb|EGC55239.1| DNA repair protein RadC [Neisseria meningitidis M6190]
 gi|325198403|gb|ADY93859.1| DNA repair protein RadC [Neisseria meningitidis G2136]
          Length = 225

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQSVRSFRQLGLM 224


>gi|327541466|gb|EGF28004.1| DNA repair protein RadC [Rhodopirellula baltica WH47]
          Length = 314

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 50/91 (54%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  +  I     + GT+D   V+ RE+ +  +  +A +++LVHNHPSG+P PS  D  +
Sbjct: 223 LDTKHKPIRTHRITVGTLDSSLVHPREVFRPAIRDAAAAVLLVHNHPSGDPTPSREDHAV 282

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           T+ +      + I V DHI++ K   +S + 
Sbjct: 283 TERLTEAGKLIGITVLDHIVVAKQRCLSLRE 313


>gi|313889365|ref|ZP_07823013.1| DNA repair protein RadC [Streptococcus pseudoporcinus SPIN 20026]
 gi|313122197|gb|EFR45288.1| DNA repair protein RadC [Streptococcus pseudoporcinus SPIN 20026]
          Length = 228

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 54/94 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +I ++    G++       REI+       ATS+I+VHNHPSG  NPS+ D 
Sbjct: 129 LYLDTQNKVIEEKTIFIGSVRRSIAEPREILHYACRNMATSMIIVHNHPSGLVNPSENDY 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           + T+NI    + + I   DHII+GK+ + SF+  
Sbjct: 189 HFTKNIKQLCDQIGIACLDHIIVGKNNYYSFREK 222


>gi|188992052|ref|YP_001904062.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris str. B100]
 gi|325915422|ref|ZP_08177736.1| DNA repair protein radc [Xanthomonas vesicatoria ATCC 35937]
 gi|167733812|emb|CAP52018.1| DNA repair protein radC homolog [Xanthomonas campestris pv.
           campestris]
 gi|325538304|gb|EGD09986.1| DNA repair protein radc [Xanthomonas vesicatoria ATCC 35937]
          Length = 159

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  +++I+ E    GTID   V+ R + +  LEL+A ++IL HNHPSGNP PS AD 
Sbjct: 63  VFLDNQHLIISTEHLFSGTIDGCEVHPRVVAKLALELNAVAVILFHNHPSGNPEPSQADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +   L  L+I V DH++IG    VS      
Sbjct: 123 QVTKRLQEALGLLDIRVIDHLVIGGRQHVSLAARGW 158


>gi|331001793|ref|ZP_08325315.1| hypothetical protein HMPREF0491_00177 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412767|gb|EGG92150.1| hypothetical protein HMPREF0491_00177 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 229

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 65/97 (67%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD     I+D V S GT++   V +REI+   L+  A ++IL+HNHPSG+P+PS ADI
Sbjct: 133 IFLDTKQKPISDMVISVGTVNASLVSVREILIESLKHLAVNVILLHNHPSGDPSPSKADI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T++I   L+ + I + DHI+IG + + SFK   II
Sbjct: 193 DITKDINKALDSIGIELVDHIVIGDNCYYSFKEQGII 229


>gi|329117353|ref|ZP_08246070.1| DNA repair protein RadC [Streptococcus parauberis NCFD 2020]
 gi|326907758|gb|EGE54672.1| DNA repair protein RadC [Streptococcus parauberis NCFD 2020]
          Length = 226

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 54/94 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I ++    G++       REI+    +  ATS+I+VHNHPSG  NPS+ D 
Sbjct: 129 IYLDTQNRIIEEKTIFIGSVKRSIAEPREILHYACKNMATSLIVVHNHPSGLTNPSENDF 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           + T+ I  + + + I   DHII+GK  + SF+  
Sbjct: 189 HFTEKIKQSCDQIGITCLDHIIVGKKTYYSFREN 222


>gi|145639535|ref|ZP_01795139.1| putative DNA repair radC-like protein [Haemophilus influenzae
           PittII]
 gi|145271326|gb|EDK11239.1| putative DNA repair radC-like protein [Haemophilus influenzae
           PittII]
          Length = 156

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ + LI  EV  +G++  + V IREI+++ L+L+A++II+ HNHP+GN  PSDAD 
Sbjct: 60  LFLDRTHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I + DH I+   A   F    +I
Sbjct: 120 YVTKRLKEACELMEIKLLDHFIVSGSASFCFTDNHLI 156


>gi|148557370|ref|YP_001264952.1| DNA repair protein RadC [Sphingomonas wittichii RW1]
 gi|148502560|gb|ABQ70814.1| DNA repair protein RadC [Sphingomonas wittichii RW1]
          Length = 230

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 66/97 (68%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N+L+ DE+ S G++D   VY+REI++R LEL + ++I+VHNHPSG+P PS  D+
Sbjct: 134 LHLNSKNVLVRDELVSEGSVDQAAVYVREIIRRALELGSAALIIVHNHPSGDPQPSRQDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I    PL I +HDH+++G     S + L +I
Sbjct: 194 ELTRELIAAAKPLGIAIHDHVVVGTRGQASLRALGLI 230


>gi|262039133|ref|ZP_06012461.1| DNA repair protein RadC [Leptotrichia goodfellowii F0264]
 gi|261746842|gb|EEY34353.1| DNA repair protein RadC [Leptotrichia goodfellowii F0264]
          Length = 224

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N LI +E   +GT+D   +Y+RE++++ L+ +A S+ILVHNHPSG+  PS +DI
Sbjct: 128 LFLNTQNELIREEELFQGTLDRSTIYVRELMKKVLKYNAKSVILVHNHPSGSLKPSQSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I + DHIII +  + SF    I+
Sbjct: 188 ILTKKIKEIFENVEIRLLDHIIISEKGYFSFLEGGIL 224


>gi|288575704|ref|ZP_05977454.2| DNA repair protein RadC [Neisseria mucosa ATCC 25996]
 gi|288567139|gb|EFC88699.1| DNA repair protein RadC [Neisseria mucosa ATCC 25996]
          Length = 232

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+I+ HNHP G+  PS +DI
Sbjct: 134 LLLNRQNRLIAMRELSRGTVAENTVYIREIVKLALDEYADSLIIAHNHPGGSATPSQSDI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  +   L  +++ + DH I+      S +    +
Sbjct: 194 AFTGRLKQALALVDVSLLDHFIVTATEVCSMREQGYM 230


>gi|58040815|ref|YP_192779.1| DNA repair protein RadC [Gluconobacter oxydans 621H]
 gi|58003229|gb|AAW62123.1| DNA repair protein RadC [Gluconobacter oxydans 621H]
          Length = 216

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 68/97 (70%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N LIADE Q+RGT++H PVY RE+ +R +E+ AT+++LVHNHPSG+P PS+AD+
Sbjct: 120 LFLNEKNSLIADEAQARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEADL 179

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  +   L  + + + DH IIG     SF+   ++
Sbjct: 180 QMTMQVQAALEVVGVTIADHFIIGNGRHTSFRRSNLL 216


>gi|325918271|ref|ZP_08180413.1| DNA repair protein radc [Xanthomonas vesicatoria ATCC 35937]
 gi|325535515|gb|EGD07369.1| DNA repair protein radc [Xanthomonas vesicatoria ATCC 35937]
          Length = 159

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 56/96 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E    GTID   V+ R + +R L+L+A ++IL HNHPSGNP PS+AD 
Sbjct: 63  VFLDIKHQILATEHLFFGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADR 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +   L   +I + DH++IG     S      
Sbjct: 123 KVTERLQQALGLFDIRILDHLVIGGRQHTSLAARGW 158


>gi|91784962|ref|YP_560168.1| DNA repair protein RadC [Burkholderia xenovorans LB400]
 gi|123168147|sp|Q13UX3|Y3578_BURXL RecName: Full=UPF0758 protein Bxeno_A3578
 gi|91688916|gb|ABE32116.1| DNA replication and repair protein RadC [Burkholderia xenovorans
           LB400]
          Length = 253

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 58/96 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  ++GT+  + VY REIV+R L L+A S+I+ HNHPSG   PS +D 
Sbjct: 157 LFLDARHRLIRCEESAQGTLTRMAVYPREIVRRALSLNAASLIVAHNHPSGAVQPSASDC 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T  +   L  +++ + DH++IG D+  SF     
Sbjct: 217 RLTHTLRDALTLIDVQLVDHLVIGTDSVYSFARAGW 252


>gi|282904233|ref|ZP_06312121.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus C160]
 gi|282906058|ref|ZP_06313913.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908973|ref|ZP_06316791.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|283958413|ref|ZP_06375864.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|297590804|ref|ZP_06949442.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus MN8]
 gi|282327237|gb|EFB57532.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331350|gb|EFB60864.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595851|gb|EFC00815.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus C160]
 gi|283790562|gb|EFC29379.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|297575690|gb|EFH94406.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus MN8]
          Length = 228

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 49/96 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ RE     +  +A +II VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREFFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG + F S      
Sbjct: 188 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223


>gi|119384282|ref|YP_915338.1| DNA repair protein RadC [Paracoccus denitrificans PD1222]
 gi|119374049|gb|ABL69642.1| DNA repair protein RadC [Paracoccus denitrificans PD1222]
          Length = 162

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/95 (49%), Positives = 66/95 (69%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LI+DE  + GT+DHVPVY RE+++RCL L+A+++I+VHNHP+G+P PS AD 
Sbjct: 66  LYLDRRNRLISDECLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHPAGDPEPSAADF 125

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            MT+ I      L +I+HDHII G     S +   
Sbjct: 126 AMTKEIRNASASLGVILHDHIITGAGRETSLRARG 160


>gi|307730752|ref|YP_003907976.1| DNA repair protein RadC [Burkholderia sp. CCGE1003]
 gi|307585287|gb|ADN58685.1| DNA repair protein RadC [Burkholderia sp. CCGE1003]
          Length = 214

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 60/96 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  +RGT+  + VY REIV+R L L+A S+I+ HNHPSG   PS +D 
Sbjct: 118 LFLDARHRLIRSEESARGTLTRMAVYPREIVRRALALNAASLIVAHNHPSGAVQPSASDC 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+++   L  +++ + DH++IG +   SF     
Sbjct: 178 SLTRSLREALALIDVQLVDHLVIGAEGVYSFARAGW 213


>gi|307294409|ref|ZP_07574253.1| DNA repair protein RadC [Sphingobium chlorophenolicum L-1]
 gi|306880560|gb|EFN11777.1| DNA repair protein RadC [Sphingobium chlorophenolicum L-1]
          Length = 245

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N+LI DE    G+ID   +Y RE+++R ++L + ++ILVHNHPSG+P PS  DI
Sbjct: 149 LHLNSRNMLIRDEHMGDGSIDQAAIYTREVIRRAIDLGSAALILVHNHPSGSPEPSRQDI 208

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      LNI VHDHIIIG     S +   +I
Sbjct: 209 EITRQIAEAGKRLNIAVHDHIIIGAQGHTSLRAKGLI 245


>gi|158520692|ref|YP_001528562.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3]
 gi|158509518|gb|ABW66485.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3]
          Length = 253

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F+D  N +I  E  S G++   PVY RE+V R L   A ++I  HNHPSG P PS  DI
Sbjct: 132 IFMDAKNRVIVVETLSEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPEPSRQDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     + I VH+HII+G+    SF     +
Sbjct: 192 AITRKLVMACKTMGITVHEHIIVGERGHFSFADNGYM 228


>gi|229824746|ref|ZP_04450815.1| hypothetical protein GCWU000182_00094 [Abiotrophia defectiva ATCC
           49176]
 gi|229791075|gb|EEP27189.1| hypothetical protein GCWU000182_00094 [Abiotrophia defectiva ATCC
           49176]
          Length = 240

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 56/96 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    LI +   S GTI+   +  RE+  + L+  A +++L+HNHPSG+P PS ADI
Sbjct: 132 LLLDIKCRLIKELTISIGTINQSFLRPREVFIQALKYEAVNLVLIHNHPSGDPTPSKADI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T  I+     + I + DHIIIG   +VSF+   +
Sbjct: 192 IVTDKILEVSELVGIPLVDHIIIGDCCYVSFREKGL 227


>gi|332042741|gb|EGI78941.1| DNA repair protein RadC [Lacinutrix algicola 5H-3-7-4]
          Length = 232

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I     S+G I    V +R  ++  LE+ A  IIL HNHPSG  NPS AD 
Sbjct: 136 IYLNNSNKVIQKNQLSKGGITGTLVDVRLALKIALEVGAVGIILAHNHPSGTLNPSLADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+TQ + T    L+I V DH+II + A+ SF    I+
Sbjct: 196 NLTQKLKTAAQSLDIKVLDHLIITEKAYFSFADESIL 232


>gi|217969675|ref|YP_002354909.1| DNA repair protein RadC [Thauera sp. MZ1T]
 gi|217507002|gb|ACK54013.1| DNA repair protein RadC [Thauera sp. MZ1T]
          Length = 225

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI      RGT+    VY RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LLLDARHCLIEAVDLFRGTLTQTSVYPREVVKLALARNAAAVILAHNHPSGAAEPSTADE 187

Query: 61  NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97
            +T+ +   L  +++ V DH ++      VSF    ++
Sbjct: 188 LLTRALKDALGLVDVRVLDHFVVPAHGHPVSFAERGLL 225


>gi|78186481|ref|YP_374524.1| DNA repair protein RadC [Chlorobium luteolum DSM 273]
 gi|123583334|sp|Q3B5A0|Y598_PELLD RecName: Full=UPF0758 protein Plut_0598
 gi|78166383|gb|ABB23481.1| DNA replication and repair protein RadC [Chlorobium luteolum DSM
           273]
          Length = 223

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +      + GT++   ++ RE+ +  +  SA +IILVHNHPSG+  PS+AD 
Sbjct: 126 LHLNTKNQVTKCVRVTVGTLNASLIHPREVFKSAIRESAHAIILVHNHPSGDTEPSNADR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      + I + DH+IIGK ++ SF+   ++
Sbjct: 186 QVTTLLKQASAVIQIDLLDHVIIGKTSWFSFRESNLL 222


>gi|296273006|ref|YP_003655637.1| DNA repair protein RadC [Arcobacter nitrofigilis DSM 7299]
 gi|296097180|gb|ADG93130.1| DNA repair protein RadC [Arcobacter nitrofigilis DSM 7299]
          Length = 220

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI  ++ + GT++   V+ RE+    +E    SII+ HNHPSG   PS  DI
Sbjct: 124 LYLDGANNLIETKIITIGTLNQSLVHPREVFSHAIEKRCASIIVAHNHPSGILKPSSEDI 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+TQ +  +   L I + DH+I   + F+S +   ++
Sbjct: 184 NVTQRLKESGKILGIELLDHVIFTNEGFISLQEEGVL 220


>gi|289666330|ref|ZP_06487911.1| DNA repair protein RadC [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 213

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/86 (43%), Positives = 56/86 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  +  IA E    GTID   ++ RE+V+R L  +A ++I+ HNHPSGNP PS+AD 
Sbjct: 128 LFLDNRHRAIAFEELFTGTIDGADIHPREVVRRALLHNAAAVIVGHNHPSGNPEPSEADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKD 86
            +T+ ++ +L  ++I + DH +IG  
Sbjct: 188 AVTKRLLESLELVDIRLLDHFVIGDG 213


>gi|258424078|ref|ZP_05686960.1| DNA repair protein RadC [Staphylococcus aureus A9635]
 gi|257845699|gb|EEV69731.1| DNA repair protein RadC [Staphylococcus aureus A9635]
          Length = 228

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG + F S      
Sbjct: 188 ITTIRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 223


>gi|42741710|gb|AAS45108.1| DNA repair protein [Alcaligenes faecalis]
          Length = 176

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 57/96 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD    LI     S+GTI    VY RE+V+  L L+A+++I+ HNHPSG+P PS ADI 
Sbjct: 81  YLDHQFRLIRYMEISQGTISQASVYPREVVKTGLRLNASAVIMAHNHPSGSPTPSQADIT 140

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T ++   L  +++ + DHII+      S   + +I
Sbjct: 141 LTTHLRKALALIDLRLLDHIIVTGKGTSSMASMGLI 176


>gi|255535538|ref|YP_003095909.1| DNA repair protein RadC [Flavobacteriaceae bacterium 3519-10]
 gi|255341734|gb|ACU07847.1| DNA repair protein RadC [Flavobacteriaceae bacterium 3519-10]
          Length = 225

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+++N +I     S G I+   V +R + +  L+  +T+I++ HNHPSGN  PS  D+
Sbjct: 129 IYLNQNNRVIGKSRLSSGGINQSVVDVRILFKSALDHLSTAIVIAHNHPSGNLKPSAEDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      LNI + DH+II ++++ SF    ++
Sbjct: 189 KITRQITDAGKILNIQLLDHLIISQNSYFSFADENVL 225


>gi|315924133|ref|ZP_07920359.1| DNA repair protein RadC [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622535|gb|EFV02490.1| DNA repair protein RadC [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 256

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +   E  S GT++   V+ RE+    +  SA++IIL HNHPSG+  PS+ D+
Sbjct: 156 LLLDTKHKIFKAEEVSVGTLNSSLVHPREVFYPAIRQSASAIILAHNHPSGDVTPSEEDL 215

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKD---AFVSFKGLRII 97
            +T  ++     + I + DH I+G      + SFK    +
Sbjct: 216 ALTNRLVQVGEIMGIPILDHFIVGGTVSADYFSFKQTGYM 255


>gi|284800095|ref|ZP_05985708.2| DNA repair protein RadC [Neisseria subflava NJ9703]
 gi|284795938|gb|EFC51285.1| DNA repair protein RadC [Neisseria subflava NJ9703]
          Length = 230

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+IL HNHP G+  PS++D+
Sbjct: 134 LLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGGSGRPSESDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   L+ ++I + DH I+      S +    +
Sbjct: 194 QFTERLKQALSLVDITLLDHFIVTAKETCSLREQGYM 230


>gi|325978185|ref|YP_004287901.1| DNA repair protein radC [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325178113|emb|CBZ48157.1| DNA repair protein radC [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 226

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I       G++       REI+    +  ATS+I+VHNHPSG+P PS+ D+
Sbjct: 129 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             TQ +      + II  DHI+IGK  + SF+  
Sbjct: 189 QFTQKMKRACEDIGIICLDHIVIGKYQYYSFREE 222


>gi|319637952|ref|ZP_07992718.1| DNA repair protein radC [Neisseria mucosa C102]
 gi|317401107|gb|EFV81762.1| DNA repair protein radC [Neisseria mucosa C102]
          Length = 224

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+IL HNHP G+  PS++D+
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGGSARPSESDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   L+ ++I + DH I+      S +    +
Sbjct: 188 QFTERLKQALSLVDITLLDHFIVTAKETCSLREQGYM 224


>gi|288905210|ref|YP_003430432.1| Putaitve DNA repair protein (RadC) [Streptococcus gallolyticus
           UCN34]
 gi|288731936|emb|CBI13501.1| Putaitve DNA repair protein (RadC) [Streptococcus gallolyticus
           UCN34]
          Length = 226

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I       G++       REI+    +  ATS+I+VHNHPSG+P PS+ D+
Sbjct: 129 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             TQ +      + II  DHI+IGK  + SF+  
Sbjct: 189 QFTQKMKRACEDIGIICLDHIVIGKYQYYSFREE 222


>gi|319952212|ref|YP_004163479.1| DNA repair protein radc [Cellulophaga algicola DSM 14237]
 gi|319420872|gb|ADV47981.1| DNA repair protein RadC [Cellulophaga algicola DSM 14237]
          Length = 232

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N ++    QS+G+I    V +R I++  LELSA +IIL HNHPSG   PS AD 
Sbjct: 136 VYLNNSNKVLHHSQQSKGSITGTLVDVRLIMKEALELSAVAIILAHNHPSGTLKPSLADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I      L+I V DH+II +  + SF    I+
Sbjct: 196 QITQKIKNAAEGLDIKVLDHLIITQAEYFSFADENIL 232


>gi|294663924|ref|ZP_06729354.1| DNA repair protein radC [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292606302|gb|EFF49523.1| DNA repair protein radC [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 105

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + ++A E    GTID   V+ R + +R L+L+A ++IL HNHPSGNP PS+AD 
Sbjct: 9   VFLDNKHHILATEHLFSGTIDGCDVHPRVVAKRALDLNAVAVILFHNHPSGNPEPSEADR 68

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ++   L  L+I V DH++IG     S      +
Sbjct: 69  KVTQHLQEALGLLDIRVLDHLVIGGRQHTSLAARGWV 105


>gi|169824054|ref|YP_001691665.1| DNA repair protein RadC [Finegoldia magna ATCC 29328]
 gi|254789652|sp|B0S3Y4|Y357_FINM2 RecName: Full=UPF0758 protein FMG_0357
 gi|167830859|dbj|BAG07775.1| DNA repair protein RadC [Finegoldia magna ATCC 29328]
          Length = 223

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/92 (41%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I+ E+ S+GTI+   V+ RE+ +  ++  A SIILVHNHPSG+  PS+ADI
Sbjct: 127 LLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNADI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    + + I V DHII+  +  +S +
Sbjct: 187 EVTKRLDKVGDLVGIQVLDHIIVSSNDSLSMR 218


>gi|161870118|ref|YP_001599288.1| DNA repair protein RadC [Neisseria meningitidis 053442]
 gi|218768270|ref|YP_002342782.1| DNA repair protein RadC [Neisseria meningitidis Z2491]
 gi|13431809|sp|Q9JU84|Y1448_NEIMA RecName: Full=UPF0758 protein NMA1448
 gi|189029398|sp|A9LZF5|Y1157_NEIM0 RecName: Full=UPF0758 protein NMCC_1157
 gi|121052278|emb|CAM08606.1| putative DNA repair protein [Neisseria meningitidis Z2491]
 gi|161595671|gb|ABX73331.1| DNA repair protein [Neisseria meningitidis 053442]
 gi|254671390|emb|CBA08859.1| DNA repair protein RadC [Neisseria meningitidis alpha153]
 gi|254673513|emb|CBA08942.1| DNA repair protein RadC [Neisseria meningitidis alpha275]
 gi|261392467|emb|CAX50016.1| putative DNA repair protein RadC [Neisseria meningitidis 8013]
 gi|316984664|gb|EFV63628.1| DNA repair RadC family protein [Neisseria meningitidis H44/76]
 gi|325134196|gb|EGC56845.1| DNA repair protein RadC [Neisseria meningitidis M13399]
 gi|325140244|gb|EGC62769.1| DNA repair protein RadC [Neisseria meningitidis CU385]
 gi|325144387|gb|EGC66689.1| DNA repair protein RadC [Neisseria meningitidis M01-240013]
 gi|325200279|gb|ADY95734.1| DNA repair protein RadC [Neisseria meningitidis H44/76]
 gi|325206135|gb|ADZ01588.1| DNA repair protein RadC [Neisseria meningitidis M04-240196]
          Length = 225

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+      SF+ L ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTAQTVRSFRQLGLM 224


>gi|163783631|ref|ZP_02178620.1| DNA repair protein RadC [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881124|gb|EDP74639.1| DNA repair protein RadC [Hydrogenivirga sp. 128-5-R1-1]
          Length = 225

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + ++  EV + GT++ V    +++++  +ELSA  +++ HNHP G P PS+ D+
Sbjct: 128 LYLDLSHRVMHLEVVAVGTLNAVNANPKDVLRPAVELSAYGVLIAHNHPQGLPEPSEGDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +      L   + DHI++  + +VSF+   ++
Sbjct: 188 MFTERLKRACEILGFELVDHIVVSPEGYVSFRDRGLL 224


>gi|322385574|ref|ZP_08059218.1| DNA repair protein RadC [Streptococcus cristatus ATCC 51100]
 gi|321270312|gb|EFX53228.1| DNA repair protein RadC [Streptococcus cristatus ATCC 51100]
          Length = 227

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I  +    GT+       REI+   L+  ATSIILVHNHPSG   PS  D 
Sbjct: 130 IYLNSQNQIIHQQTIFVGTVTRSIAEPREILHYALKHLATSIILVHNHPSGVTLPSKNDD 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+++      + +++ DH+I+ K+ + S++  
Sbjct: 190 EVTKHMKEACELMGLVLLDHLIVSKNNYYSYREK 223


>gi|302381094|ref|ZP_07269554.1| putative DNA repair protein RadC [Finegoldia magna ACS-171-V-Col3]
 gi|303235301|ref|ZP_07321919.1| putative DNA repair protein RadC [Finegoldia magna BVS033A4]
 gi|302311141|gb|EFK93162.1| putative DNA repair protein RadC [Finegoldia magna ACS-171-V-Col3]
 gi|302493615|gb|EFL53403.1| putative DNA repair protein RadC [Finegoldia magna BVS033A4]
          Length = 223

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/92 (41%), Positives = 59/92 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I+ E+ S+GTI+   V+ RE+ +  ++  A SIILVHNHPSG+  PS+ADI
Sbjct: 127 LLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNADI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    + + I V DHII+  +  +S +
Sbjct: 187 EVTKRLDKVGDLVGIQVLDHIIVSSNDSLSMR 218


>gi|89053211|ref|YP_508662.1| DNA repair protein RadC [Jannaschia sp. CCS1]
 gi|88862760|gb|ABD53637.1| DNA repair protein RadC [Jannaschia sp. CCS1]
          Length = 273

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/97 (53%), Positives = 74/97 (76%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N+LIADE    GT+DHVPVY RE+ +R LEL+AT+IILVHNHPSG+P PS ADI
Sbjct: 177 LYLNRRNVLIADEAVGTGTVDHVPVYPREVAKRSLELNATAIILVHNHPSGDPTPSQADI 236

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +    + + ++VHDH+IIGK +  SF+   ++
Sbjct: 237 DVTQAVQLACDAIGVVVHDHVIIGKQSETSFRADLLM 273


>gi|296157154|ref|ZP_06839990.1| DNA repair protein RadC [Burkholderia sp. Ch1-1]
 gi|295892490|gb|EFG72272.1| DNA repair protein RadC [Burkholderia sp. Ch1-1]
          Length = 253

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 58/96 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  ++GT+  + VY REIV+R L L+A S+I+ HNHPSG   PS +D 
Sbjct: 157 LFLDARHRLIRCEESAQGTLTRMAVYPREIVRRALSLNAASLIVAHNHPSGAVQPSASDC 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T  +   L  +++ + DH++IG D+  SF     
Sbjct: 217 RLTHTLRDALTLIDVQLVDHLVIGTDSVYSFARAGW 252


>gi|330429000|gb|AEC20334.1| DNA repair protein radC-like protein [Pusillimonas sp. T7-7]
          Length = 177

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+    +I     S GT+    VY REIV+  L L A +II+ HNHPSG P PS+AD+
Sbjct: 81  LYLNSQFKVIRYMEMSHGTLTQASVYPREIVKTALRLDAAAIIMSHNHPSGIPEPSEADL 140

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+++   L  +++ + DHII+      S     
Sbjct: 141 ALTRHLKHALALVDVRLLDHIIVTGQNTTSLAERG 175


>gi|225075521|ref|ZP_03718720.1| hypothetical protein NEIFLAOT_00534 [Neisseria flavescens
           NRL30031/H210]
 gi|224953156|gb|EEG34365.1| hypothetical protein NEIFLAOT_00534 [Neisseria flavescens
           NRL30031/H210]
          Length = 230

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+IL HNHP G+  PS++D+
Sbjct: 134 LLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGGSARPSESDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   L+ ++I + DH I+      S +    +
Sbjct: 194 QFTERLKQALSLVDITLLDHFIVTAKETCSLREQGYM 230


>gi|227824844|ref|ZP_03989676.1| DNA repair protein radC [Acidaminococcus sp. D21]
 gi|226905343|gb|EEH91261.1| DNA repair protein radC [Acidaminococcus sp. D21]
          Length = 229

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L     ++  E    G+     V+ REI +  L   A+++ILVHNHPSG+P PS  DI
Sbjct: 133 LLLSAKGKVLGIEEVFVGSASQATVHPREIFETALHHHASALILVHNHPSGDPMPSRPDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      ++I + DHIIIG   + SFK    +
Sbjct: 193 RLTERLAQVGGLMDIPLADHIIIGDGIYYSFKDADQL 229


>gi|325918019|ref|ZP_08180183.1| DNA repair protein [Xanthomonas vesicatoria ATCC 35937]
 gi|325535783|gb|EGD07615.1| DNA repair protein [Xanthomonas vesicatoria ATCC 35937]
          Length = 169

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 52/96 (54%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FLD  + LI  E    G+++   V+ R +VQR L L+A ++I+ HNHPSG+  PS AD  
Sbjct: 74  FLDNQHRLIGVERLFSGSVEGAEVHPRIVVQRALALNAAAVIVAHNHPSGHTEPSAADRA 133

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T  + T L  + I + DH ++     VS      +
Sbjct: 134 VTVQLKTVLQLVEIRLLDHFVVTAHQAVSMATRGWV 169


>gi|297184191|gb|ADI20310.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 122

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ +  +A     +G +      +R I++R L  +AT+II+ HNHPSG+  PS+ D 
Sbjct: 26  LYLNRAHAPLARHQLFKGGLTGTVTDVRLILKRALHWNATAIIVAHNHPSGSLQPSENDK 85

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +    + L+I + DH+I+    + SF    ++
Sbjct: 86  RMTRKLSAAADTLDIKLIDHLIVAGSGYFSFSDQGLL 122


>gi|152991449|ref|YP_001357171.1| DNA repair protein RadC [Nitratiruptor sp. SB155-2]
 gi|151423310|dbj|BAF70814.1| DNA repair protein RadC [Nitratiruptor sp. SB155-2]
          Length = 220

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 52/96 (54%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD  N +    V + GT++   V+ RE+    +E    SII+ HNHPS N  PS  DI 
Sbjct: 125 YLDGANRICEKRVITIGTLNQSLVHPREVFAPAIESRCASIIVAHNHPSNNLTPSREDIL 184

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +TQ +  +   L I + DHII  K+ FVS +   I+
Sbjct: 185 VTQKLKQSGKILGIELLDHIIFSKEGFVSLQEEGIL 220


>gi|56551559|ref|YP_162398.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761310|ref|ZP_04759398.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|56543133|gb|AAV89287.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241374217|gb|EER63714.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 227

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/97 (48%), Positives = 69/97 (71%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD HN LI DE+ S G++D  PVY+RE+++R +EL +  +ILVHNHPSG+ +PS+ADI
Sbjct: 131 LHLDNHNRLIRDEILSEGSVDQAPVYVREVIRRAIELCSVGLILVHNHPSGDASPSEADI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++I+    PL I +HDH+II      S +GL ++
Sbjct: 191 QLTRSIVAAARPLKIYLHDHVIISSSGACSLRGLGLL 227


>gi|325954476|ref|YP_004238136.1| DNA repair protein RadC [Weeksella virosa DSM 16922]
 gi|323437094|gb|ADX67558.1| DNA repair protein RadC [Weeksella virosa DSM 16922]
          Length = 233

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L++ N ++  E  SRG I    V IR + ++ +E  AT++IL HNHPSG+  PS++D+
Sbjct: 137 MYLNQGNAVLKLEQISRGGISQTLVDIRIVFKKGIEQMATAMILAHNHPSGSLKPSESDL 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      L+I + DH+I+ + ++ SF    ++
Sbjct: 197 SLTRKLQEAAKVLDINILDHLIVTQTSYFSFADEGLL 233


>gi|256842605|ref|ZP_05548106.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|262409592|ref|ZP_06086133.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|265768051|ref|ZP_06095433.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|256735742|gb|EEU49075.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|262352606|gb|EEZ01705.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|263252302|gb|EEZ23838.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 208

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI     S G I+  PV IR I+++ L  +A S I+VHNHPSG   PS AD 
Sbjct: 109 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADD 168

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L+I + DH+I+  + + S+     +
Sbjct: 169 RLTEAVKKAAETLDIRLVDHVIVAGNNYYSYADEGRL 205


>gi|42520237|ref|NP_966152.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42409975|gb|AAS14086.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 224

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 69/97 (71%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++++K   LIA+++Q+ GT+D  P+Y+REI++R L + +TSI++ HNHPSG+  PS++DI
Sbjct: 128 IYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSGDTQPSNSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DHIII   ++ SFK  R++
Sbjct: 188 SLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 224


>gi|255016341|ref|ZP_05288467.1| putative DNA repair protein [Bacteroides sp. 2_1_7]
          Length = 220

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI     S G I+  PV IR I+++ L  +A S I+VHNHPSG   PS AD 
Sbjct: 121 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSGADD 180

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L+I + DH+I+  + + S+     +
Sbjct: 181 RLTEAVKKAAETLDIRLLDHVIVAGNNYYSYADEGRL 217


>gi|260752842|ref|YP_003225735.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552205|gb|ACV75151.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 227

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/97 (48%), Positives = 69/97 (71%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD HN LI DE+ S G++D  PVY+RE+++R +EL +  +ILVHNHPSG+ +PS+ADI
Sbjct: 131 LHLDNHNRLIRDEILSEGSVDQAPVYVREVIRRAIELCSVGLILVHNHPSGDASPSEADI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++I+    PL I +HDH+II      S +GL ++
Sbjct: 191 QLTRSIVAAARPLKIYLHDHVIISSSGACSLRGLGLL 227


>gi|209947531|ref|YP_002291028.1| putative DNA repair-like protein [Haemophilus influenzae]
 gi|51507273|emb|CAF29022.1| putative DNA repair-like protein [Haemophilus influenzae]
          Length = 156

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ + LI  EV  +G++  + V IREI+++ L+L+A++II+ HNHP+GN  PSDAD 
Sbjct: 60  LFLDRMHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I + DH I+   A   F    ++
Sbjct: 120 YITKRLKEACELMEIKLLDHFIVSGSASFCFTDNHLM 156


>gi|291278966|ref|YP_003495801.1| DNA repair protein RadC [Deferribacter desulfuricans SSM1]
 gi|290753668|dbj|BAI80045.1| DNA repair protein RadC [Deferribacter desulfuricans SSM1]
          Length = 232

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    +   +V S G+++      +E+ ++ L   A ++IL HNHPSGN  PS +DI
Sbjct: 136 VFLDSKGRIKEYKVLSSGSVNESYFPPKELAKQALVRDAVAVILAHNHPSGNLKPSQSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+N+   L  ++I + DHII+ K+ F+SFK   ++
Sbjct: 196 RYTKNVKNALELVDIALVDHIIVTKNGFLSFKQEELL 232


>gi|158522926|ref|YP_001530796.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3]
 gi|158511752|gb|ABW68719.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3]
          Length = 167

 Score =  117 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 61/97 (62%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N ++A E    G++    VY REI++R + L ++++++ HNHP+G+P PS  D 
Sbjct: 55  LYLDTKNRILAMEKMFTGSLSSTAVYPREIIKRVIALKSSAVVITHNHPTGDPGPSVEDT 114

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++  L  +N+ +HDHII+G + + SF    +I
Sbjct: 115 RITIRLLVALKSMNVDLHDHIIVG-EGYYSFADAGVI 150


>gi|315225157|ref|ZP_07866974.1| DNA repair protein RadC [Capnocytophaga ochracea F0287]
 gi|314944840|gb|EFS96872.1| DNA repair protein RadC [Capnocytophaga ochracea F0287]
          Length = 225

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I       G I H  V +R + +  LE  A ++ILVHNHPSG+  PS  DI
Sbjct: 129 LYLNSTNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGSITPSKEDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +TQ + T  + L+I + DH+I+ +  ++S    R+
Sbjct: 189 ELTQRVKTAGDMLDIKLLDHVIVTEKEYLSLLDERL 224


>gi|134296674|ref|YP_001120409.1| DNA repair protein RadC [Burkholderia vietnamiensis G4]
 gi|172044368|sp|A4JH21|Y2579_BURVG RecName: Full=UPF0758 protein Bcep1808_2579
 gi|134139831|gb|ABO55574.1| DNA replication and repair protein RadC [Burkholderia vietnamiensis
           G4]
          Length = 258

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+R L L+A S+I+ HNHPSG   PS  D 
Sbjct: 162 LYLDARHGLIEVEESARGSLTRMAVYPREIVRRALMLNAASLIIAHNHPSGAVQPSAEDR 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++  + DH+++G     SF     +
Sbjct: 222 RLTRVLHEALALVDAKLLDHVVVGTADTFSFARAGWL 258


>gi|317407831|gb|EFV87757.1| hypothetical protein HMPREF0005_03171 [Achromobacter xylosoxidans
           C54]
          Length = 165

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    +IA E   RGT+    VY RE+V+  +  +A SI++ HNHPSG+  PS AD+
Sbjct: 69  MFLDAQLRMIAFEEMFRGTLSETSVYPREVVKAAIRHNAHSILIAHNHPSGSSQPSKADV 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   +  +N+ + DH+I+   +  S   +  I
Sbjct: 129 EVTRRLKEAVALVNVTLVDHVIVAAGSGHSMAKMGWI 165


>gi|293537093|ref|ZP_06671773.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus M1015]
 gi|290919938|gb|EFD97006.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus M1015]
          Length = 228

 Score =  117 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 49/96 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIII  + F S      
Sbjct: 188 ITTMRLKECGLILGIDLLDHIIISDNRFTSLVEAGY 223


>gi|82751250|ref|YP_416991.1| DNA repair protein RadC [Staphylococcus aureus RF122]
 gi|123547872|sp|Q2YT78|Y1521_STAAB RecName: Full=UPF0758 protein SAB1521c
 gi|82656781|emb|CAI81210.1| DNA repair protein homolog [Staphylococcus aureus RF122]
          Length = 228

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 51/96 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNVVIKESCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +  +   L I + DHIIIG + F S      
Sbjct: 188 ITTMRLKESGLILGIDLLDHIIIGDNRFTSLVEAGY 223


>gi|225164735|ref|ZP_03726969.1| DNA repair protein-like protein [Opitutaceae bacterium TAV2]
 gi|224800656|gb|EEG19018.1| DNA repair protein-like protein [Opitutaceae bacterium TAV2]
          Length = 246

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 7/104 (6%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+    L+     + GT +    + RE+ +  +  +A+++ILVHNHPSG+P PS AD 
Sbjct: 143 LCLNARMRLLRCVEITSGTANSTLCHAREVFRDAIREAASALILVHNHPSGDPMPSSADT 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-------KDAFVSFKGLRII 97
            +T+ +      L I + DH+I+G          F SF+ + ++
Sbjct: 203 ALTRRLRQASEVLEIKLVDHVIVGSPEADPTGRGFFSFREMGLV 246


>gi|237736936|ref|ZP_04567417.1| DNA repair protein radC [Fusobacterium mortiferum ATCC 9817]
 gi|229420798|gb|EEO35845.1| DNA repair protein radC [Fusobacterium mortiferum ATCC 9817]
          Length = 225

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  NIL+  E    GTID   VY REI+++ ++  A  +I  HNHPSGN  PS  DI
Sbjct: 129 IFLNNFNILVGSETLFVGTIDKSAVYPREILEKVIQYKAKGVIFAHNHPSGNLRPSKQDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++   L  +++ + +HIII KD + SF    +I
Sbjct: 189 QITEHMQEVLEMIDVKLLEHIIITKDGYFSFLQEGLI 225


>gi|189499793|ref|YP_001959263.1| DNA repair protein RadC [Chlorobium phaeobacteroides BS1]
 gi|238692279|sp|B3EP05|Y831_CHLPB RecName: Full=UPF0758 protein Cphamn1_0831
 gi|189495234|gb|ACE03782.1| DNA repair protein RadC [Chlorobium phaeobacteroides BS1]
          Length = 223

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I+  + S GT++   ++ REI +  +  S+ +IILVHNHPSG+  PS+AD 
Sbjct: 126 LHLNTKNQIISHHLISVGTLNASLIHPREIYKSAIRESSHAIILVHNHPSGDVEPSNADK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +    + L I + DHII G+DA+ SF+   ++
Sbjct: 186 QVTSILEHAGSILQINLLDHIITGRDAWFSFREHELL 222


>gi|224540956|ref|ZP_03681495.1| hypothetical protein CATMIT_00107 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526107|gb|EEF95212.1| hypothetical protein CATMIT_00107 [Catenibacterium mitsuokai DSM
           15897]
          Length = 226

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 40/92 (43%), Positives = 58/92 (63%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD HN LIA++    G+++   V  REI +  L  +  SII VHNHPSG+ +PS  DI+M
Sbjct: 128 LDNHNRLIAEKTLFIGSVNMSIVSAREIFREALAFNGVSIICVHNHPSGDAHPSSEDISM 187

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           TQ ++     +N+ + DHIIIG++ + SFK  
Sbjct: 188 TQKLVDLGKMMNVDIVDHIIIGRNQYYSFKAE 219


>gi|298207705|ref|YP_003715884.1| putative DNA repair protein [Croceibacter atlanticus HTCC2559]
 gi|83850342|gb|EAP88210.1| putative DNA repair protein [Croceibacter atlanticus HTCC2559]
          Length = 231

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I     S+G I    V +R + +  L++ A +IILVHNHPSG    S AD 
Sbjct: 135 VYLNNSNKVIQQTQLSKGGITGTLVDVRLLFKMVLQVGAVAIILVHNHPSGTLKASQADK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L+I V DH+I+ + A+ SF    I+
Sbjct: 195 QLTEKLKLAGQSLDIKVLDHVIVTQKAYFSFADNGIL 231


>gi|313903074|ref|ZP_07836468.1| DNA repair protein RadC [Thermaerobacter subterraneus DSM 13965]
 gi|313466576|gb|EFR62096.1| DNA repair protein RadC [Thermaerobacter subterraneus DSM 13965]
          Length = 299

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 56/95 (58%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  + ++  ++ S GT++   V+ RE+ +  +   A +++LVHNHPSG+P PS  D+ +
Sbjct: 202 LNTKHYVLGVDLISIGTLNGSLVHPREVFRAAVRRGAAALVLVHNHPSGDPTPSPEDVQV 261

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++     + I V DH+IIG   + S +   ++
Sbjct: 262 TRRLVEAGRIMGIDVLDHVIIGNQRYASLREAGLV 296


>gi|254283335|ref|ZP_04958303.1| DNA repair protein RadC [gamma proteobacterium NOR51-B]
 gi|219679538|gb|EED35887.1| DNA repair protein RadC [gamma proteobacterium NOR51-B]
          Length = 223

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 54/95 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N LI  E    GTID   V+ RE+V+  L   A S+I+ HNHPSG   PS+ D 
Sbjct: 127 LYLDSRNRLIVAEDLFAGTIDGAAVFPREVVRGALLHDAASVIVAHNHPSGALAPSEQDR 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ + + L+ ++I + DH I+G    VS   L 
Sbjct: 187 QLTRRLSSALSLVDIRLLDHFIVGFGDSVSLASLG 221


>gi|269468964|gb|EEZ80545.1| DNA repair protein RadC [uncultured SUP05 cluster bacterium]
          Length = 226

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 2/97 (2%)

Query: 1   LFLDKHNILIADE-VQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           L LD+ + LI        GT++   ++ RE+V+  LE +A+++IL HNHPSG+P PS AD
Sbjct: 128 LLLDQKHRLIEKVITLFTGTLNQASIHPREVVKTVLEKNASAVILAHNHPSGDPAPSQAD 187

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFV-SFKGLR 95
           I++TQ I   L  +++ V DH+IIG      S     
Sbjct: 188 IDITQRIKEALALIDVRVLDHVIIGDGGRFESLAQSG 224


>gi|15894524|ref|NP_347873.1| DNA repair protein RadC [Clostridium acetobutylicum ATCC 824]
 gi|25009038|sp|Q97JN2|Y1241_CLOAB RecName: Full=UPF0758 protein CA_C1241
 gi|15024167|gb|AAK79213.1|AE007637_3 RadC protein ortholog [Clostridium acetobutylicum ATCC 824]
 gi|325508656|gb|ADZ20292.1| DNA repair protein RadC [Clostridium acetobutylicum EA 2018]
          Length = 229

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  NI+I     S G+++   V+ RE+    +   A SIIL HNHPSG+P PS+ D+
Sbjct: 133 IMLNTKNIVIKISDVSVGSLNSSIVHPREVYVEPILKHAASIILCHNHPSGDPKPSNEDL 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ +      + I + DHIIIG   ++S K   ++
Sbjct: 193 NITKRLYECSKFIGIELLDHIIIGDGIYISLKEEGLL 229


>gi|317402956|gb|EFV83496.1| DNA repair protein radC [Achromobacter xylosoxidans C54]
          Length = 225

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LIA    +RGT+    VY RE+V+  L   A ++I+ HNHPSG   PS AD 
Sbjct: 129 LYLDSRLRLIASGELARGTLSQASVYPREVVREALRHHAAALIVAHNHPSGLAEPSAADQ 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+++   L  +++ + DH+II  D   S   L  I
Sbjct: 189 AFTRHLKQALALVDVALIDHLIIAGDTVTSMAELGRI 225


>gi|297621459|ref|YP_003709596.1| DNA repair protein radC family [Waddlia chondrophila WSU 86-1044]
 gi|297376760|gb|ADI38590.1| DNA repair protein radC family [Waddlia chondrophila WSU 86-1044]
          Length = 231

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    LI  ++ S GT+ H   + RE+    +   A S+++ HNHPSG+P PS  DI
Sbjct: 128 LLLDTKGDLITQKIISIGTLSHTLAHPREVFFDAVRHKAASLVIAHNHPSGDPTPSRHDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            MT  +I     + I + DH+IIG   FVS + + +
Sbjct: 188 EMTAQLIKAGELMGIPLQDHLIIGSRTFVSLREIGL 223


>gi|124514541|gb|EAY56054.1| DNA repair proteins (RadC) [Leptospirillum rubarum]
          Length = 412

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 53/95 (55%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L++ +  I     S G++    V+ RE     +  SA ++I +HNHPSG+P PS  D+N+
Sbjct: 127 LNQRHQPIDLHRISEGSLSMTLVHPREAFSPAIRDSAAAVIFLHNHPSGDPEPSIDDLNL 186

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +  + + L I V DH+++G   FVS     ++
Sbjct: 187 TRRLGESGDILGIRVLDHVVLGDGRFVSLADQGVL 221


>gi|313677180|ref|YP_004055176.1| DNA replication and repair protein radc [Marivirga tractuosa DSM
           4126]
 gi|312943878|gb|ADR23068.1| DNA replication and repair protein RadC [Marivirga tractuosa DSM
           4126]
          Length = 234

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + +++ N +I  +  S G I      ++ I +  ++  A+++IL HNHPSGN NPS+ D+
Sbjct: 138 IMMNRANRVIRMKRISSGGISGTVADVKIIFKEAIDQMASALILAHNHPSGNRNPSEQDV 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +  +   L+I V DHII  +D + SF    ++
Sbjct: 198 RLTRKMKESGQLLDIPVLDHIIFAEDKYYSFADEAML 234


>gi|322389482|ref|ZP_08063034.1| DNA repair protein RadC [Streptococcus parasanguinis ATCC 903]
 gi|321143860|gb|EFX39286.1| DNA repair protein RadC [Streptococcus parasanguinis ATCC 903]
          Length = 227

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    GT++      REI+   L+  ATSIIL HNHPSG   PS  D 
Sbjct: 129 LYLNTQNEIIHQQTIFIGTVNRSIAEPREILHYALKHMATSIILAHNHPSGAVFPSKNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T  +I     + + + DH+I+ ++ + S++  
Sbjct: 189 EVTHRVIEACEVMGLTLLDHLIVSEENYYSYREE 222


>gi|163754488|ref|ZP_02161610.1| putative DNA repair protein [Kordia algicida OT-1]
 gi|161325429|gb|EDP96756.1| putative DNA repair protein [Kordia algicida OT-1]
          Length = 145

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N ++     S+G      V  + +    L+ +A+SII+ HNHPSGN NPS++D 
Sbjct: 48  LLLNRSNQVLGIYPLSKGGTASTVVDAKLVFSVALKCNASSIIIAHNHPSGNLNPSESDK 107

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      L I + DH+I+ KD F SF    ++
Sbjct: 108 SITEKLKKAAKYLEITLLDHLIVTKDDFFSFNDNGLL 144


>gi|326793822|ref|YP_004311642.1| DNA repair protein RadC [Marinomonas mediterranea MMB-1]
 gi|326544586|gb|ADZ89806.1| DNA repair protein RadC [Marinomonas mediterranea MMB-1]
          Length = 224

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +    GTID   VY REIV+  L  +A +II+ HNHPSG   PS +DI
Sbjct: 128 LFLDSQHRLIRYQELFHGTIDSAAVYPREIVKAALINNAAAIIVAHNHPSGVCEPSQSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I   L  +++ + DH I+G+   +S      +
Sbjct: 188 HITSRIKKALALIDVALLDHFIVGEGQPLSLAERGYV 224


>gi|125624319|ref|YP_001032802.1| DNA repair protein radC-like protein [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|229485554|sp|A2RLC4|Y1515_LACLM RecName: Full=UPF0758 protein llmg_1515
 gi|124493127|emb|CAL98091.1| DNA repair protein radC homolog [Lactococcus lactis subsp. cremoris
           MG1363]
          Length = 227

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 47/93 (50%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD  N +I  +    G  +H     REI+   ++  +  +++ HNHPSGN  PS AD  
Sbjct: 130 YLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQPSQADKI 189

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            T+ I    + + I   DHII+G   + SF+  
Sbjct: 190 FTKKIKNACDNIGINFIDHIIVGAGNYYSFRER 222


>gi|291461476|dbj|BAI83358.1| DNA repair protein RadC [Macrococcus caseolyticus]
          Length = 147

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 50/95 (52%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N     E  S G+++   ++ RE+ +  +  +A +IIL HNHPSG+P PS  DI  
Sbjct: 53  LNTKNEPTHIEKVSVGSLNASIIHPREVFKSAILSNAANIILGHNHPSGHPQPSYEDIEA 112

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +      + I V DHII   D+F S K    +
Sbjct: 113 TKRLYEVGKLIGIDVLDHIIFTDDSFYSLKESGHL 147


>gi|206895219|ref|YP_002247779.1| DNA repair protein [Coprothermobacter proteolyticus DSM 5265]
 gi|229485550|sp|B5Y6A0|Y1522_COPPD RecName: Full=UPF0758 protein COPRO5265_1522
 gi|206737836|gb|ACI16914.1| DNA repair protein [Coprothermobacter proteolyticus DSM 5265]
          Length = 235

 Score =  117 bits (293), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD+ N  I     S G+     V  +EI+++    SA ++IL+HNHPSG+P+PS  D+
Sbjct: 139 LLLDRKNRPIKHVEISVGSSIQTTVDPKEILKQVSLTSAQALILIHNHPSGDPSPSREDV 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      +   + DHII+GK+  VS    ++I
Sbjct: 199 AVTKQLKQACELVGAQLLDHIIVGKNQHVSLAREKLI 235


>gi|188996570|ref|YP_001930821.1| DNA repair protein RadC [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931637|gb|ACD66267.1| DNA repair protein RadC [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 229

 Score =  117 bits (293), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA EV ++G+++ V V  R+I+   ++ +   II+ HNHP+ +P PS  DI
Sbjct: 133 LYLNSSNHLIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ + T  N L   + DHII+GK  F SF    +I
Sbjct: 193 EFTKKLQTLANELGFDLLDHIIVGKKDFYSFAKAGLI 229


>gi|149280605|ref|ZP_01886720.1| DNA repair protein [Pedobacter sp. BAL39]
 gi|149228650|gb|EDM34054.1| DNA repair protein [Pedobacter sp. BAL39]
          Length = 232

 Score =  117 bits (293), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N +I +   S+G +       + I +  LE +A +IIL HNHPSGN  PS  D+
Sbjct: 136 LLLNRANHVIGNFQISKGGLSGTVADPKVIFKTALEHNAAAIILSHNHPSGNCKPSADDL 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ I+     L++ V DH+I+      SF    +I
Sbjct: 196 SITKKIVAAGKVLDLPVIDHLIVTNKMCFSFTDEGLI 232


>gi|301163985|emb|CBW23540.1| putative DNA repair protein [Bacteroides fragilis 638R]
          Length = 148

 Score =  117 bits (293), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N ++   + S G I    V +R I+Q  L  ++ +IIL HNHPSGN  PS  D+
Sbjct: 52  LFLNQSNQVLGYTLISEGGITDTTVDVRVILQAALLTNSVAIILAHNHPSGNTKPSRQDM 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + IIV DH+I+    + SF     +
Sbjct: 112 EITKQVKEAARLMRIIVTDHLILTDAGYYSFADEGQL 148


>gi|119357420|ref|YP_912064.1| DNA repair protein RadC [Chlorobium phaeobacteroides DSM 266]
 gi|119354769|gb|ABL65640.1| DNA repair protein RadC [Chlorobium phaeobacteroides DSM 266]
          Length = 166

 Score =  117 bits (293), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 1/96 (1%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FL   N +   ++ SRGT++   ++ RE+ +  +  +A +IILVHNHPSGNP PS+AD  
Sbjct: 69  FLSTKNYITGTQLVSRGTLNASLIHPREVFRGAILANANAIILVHNHPSGNPEPSNADKQ 128

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRI 96
           +T+ I ++ + + I + DH+IIG +    SF+   +
Sbjct: 129 VTKQIRSSADIIGIELLDHVIIGSNGNHFSFRQEGL 164


>gi|163858086|ref|YP_001632384.1| DNA repair protein radC-like protein [Bordetella petrii DSM 12804]
 gi|163261814|emb|CAP44116.1| DNA repair protein radC homolog [Bordetella petrii]
          Length = 177

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+    +I     S GT+    VY REIV+  L L A +II+ HNHPSG P PS+AD+
Sbjct: 81  LYLNSQFKVIRYMEMSHGTLTQASVYPREIVKTALRLDAAAIIMSHNHPSGIPEPSEADL 140

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+++   L  +++ + DHII+      S     
Sbjct: 141 ALTRHLKHALALVDVRLVDHIIVTGQNTTSLAERG 175


>gi|52549653|gb|AAU83502.1| DNA repair proteins [uncultured archaeon GZfos29E12]
          Length = 403

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 40/88 (45%), Positives = 57/88 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LI  ++ S GT+D+  V+ RE+ +  ++ SA  +ILVHNHPSG+P PS+ D+
Sbjct: 308 LLLDSKNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVILVHNHPSGDPEPSENDV 367

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAF 88
            +TQ I    N LNI V DH+II +  +
Sbjct: 368 EITQKIAKAGNILNIKVLDHVIIAEKGW 395


>gi|75906397|ref|YP_320693.1| DNA repair protein RadC [Anabaena variabilis ATCC 29413]
 gi|123610894|sp|Q3MGT8|Y172_ANAVT RecName: Full=UPF0758 protein Ava_0172
 gi|75700122|gb|ABA19798.1| DNA replication and repair protein RadC [Anabaena variabilis ATCC
           29413]
          Length = 243

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 47/93 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+  +V + GT        REI +  +   AT  I+ HNHPSGN  PS  DI
Sbjct: 139 LLLDVKNRLLGTQVITIGTATETLASPREIFREIIRQGATRTIVAHNHPSGNVEPSPEDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T+ ++     L I + DH+I+G     S + 
Sbjct: 199 ELTRQLLAGAQLLGIPLLDHLILGNGNHQSLRE 231


>gi|301168693|emb|CBW28284.1| putative DNA repair radC-like protein [Haemophilus influenzae
           10810]
          Length = 156

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ + LI  EV  +G++  + V IREI+++ L+L+A++II+ HNHP+GN  PSDAD 
Sbjct: 60  LFLDRIHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      ++I + DH I+   A   F    +I
Sbjct: 120 YITKRLKEACELMDIKLLDHFIVSGSASFCFTDNHLI 156


>gi|146296473|ref|YP_001180244.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410049|gb|ABP67053.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 160

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    + A    +RGTI+   V   EI +R L  +  SII+ HNHP G+  PS  DI
Sbjct: 64  ICLDLQLNVTAVFEVARGTINTALVSTHEIFKRVLLTNCNSIIIAHNHPGGSERPSMDDI 123

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N T+ I      L+I ++DHIII ++A+ SF    I+
Sbjct: 124 NTTKRIKEAAQLLDIKLNDHIIITENAYFSFAEAGIL 160


>gi|258645224|ref|ZP_05732693.1| DNA repair protein RadC [Dialister invisus DSM 15470]
 gi|260402574|gb|EEW96121.1| DNA repair protein RadC [Dialister invisus DSM 15470]
          Length = 227

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 55/96 (57%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FL+  N L+  +    G++D  PV I+E ++  L   A  +ILVHNHPSG P PSDADIN
Sbjct: 132 FLNTKNRLLGYKEICVGSLDAAPVDIKEAMRWALRFKAHGMILVHNHPSGYPEPSDADIN 191

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+      +  +I + DH+IIG   F S     ++
Sbjct: 192 LTRQFRRATSFFDIRLLDHVIIGDGEFASLNKNGLV 227


>gi|229115981|ref|ZP_04245376.1| DNA repair protein [Bacillus cereus Rock1-3]
 gi|228667475|gb|EEL22922.1| DNA repair protein [Bacillus cereus Rock1-3]
          Length = 150

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 54/95 (56%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +I   +   GT+D   V+ RE  +  +  +A+SI+  HNHPSG+   S  D+ +
Sbjct: 56  LNTKNEIIGCSIVFEGTVDSSLVHPRETFRTAILNNASSIVCFHNHPSGHSVESHEDVEV 115

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +    N + I + DH+IIG++++VS     II
Sbjct: 116 TKRLKECGNIIGIPLLDHVIIGENSYVSLMKKGII 150


>gi|325689664|gb|EGD31668.1| DNA repair protein RadC [Streptococcus sanguinis SK115]
 gi|327489851|gb|EGF21641.1| DNA repair protein RadC [Streptococcus sanguinis SK1058]
          Length = 227

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N ++  +    GT+       REI+   L+  ATSIILVHNHPSG+  PS  D 
Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +TQ++      + +++ DH+I+ K  + S++  
Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223


>gi|254198406|ref|ZP_04904828.1| DNA repair protein [Burkholderia pseudomallei S13]
 gi|169655147|gb|EDS87840.1| DNA repair protein [Burkholderia pseudomallei S13]
          Length = 165

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD H+ +IA E    G ID   +  R I+ R + L++T+II+ HNHPSG   PS AD 
Sbjct: 69  IFLDTHHRVIAVEPLFYGGIDGAHISSRVILHRAILLNSTAIIVAHNHPSGETQPSPADQ 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ + DH IIG+    SF    ++
Sbjct: 129 RLTAELAALLRLVDMRLLDHFIIGRGEPFSFAQAGLL 165


>gi|270296748|ref|ZP_06202947.1| DNA repair protein [Bacteroides sp. D20]
 gi|270272735|gb|EFA18598.1| DNA repair protein [Bacteroides sp. D20]
          Length = 148

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 50/95 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ + ++   + S G I      +R I+Q  L  ++ +IIL HNHPSGN  PS  D+
Sbjct: 52  LFLNQSSQVLGYTLISEGGITETCADVRVILQAALLTNSVAIILAHNHPSGNLKPSRQDM 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +      + I V DH+I+    + SF    
Sbjct: 112 EITKQVKEAARLMRITVLDHLILTDTGYYSFADEG 146


>gi|325138320|gb|EGC60889.1| DNA repair protein RadC [Neisseria meningitidis ES14902]
 gi|325142461|gb|EGC64865.1| DNA repair protein RadC [Neisseria meningitidis 961-5945]
          Length = 209

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 112 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 171

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 172 MFTRRLAQAMSLVDVSLLDHFIVTSQSVRSFRQLGLM 208


>gi|297587677|ref|ZP_06946321.1| DNA repair protein RadC [Finegoldia magna ATCC 53516]
 gi|297574366|gb|EFH93086.1| DNA repair protein RadC [Finegoldia magna ATCC 53516]
          Length = 223

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 38/92 (41%), Positives = 58/92 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I+ E+ S+GTI+   V+ RE+ +  ++  A SIILVHNHPSG+  PS+ADI
Sbjct: 127 LLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNADI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            +T+ +    + + I V DHII+     +S +
Sbjct: 187 EVTKRLDKVGDLVGIQVLDHIIVSSSDSLSMR 218


>gi|298378018|ref|ZP_06987966.1| DNA repair protein RadC [Bacteroides sp. 3_1_19]
 gi|298265095|gb|EFI06760.1| DNA repair protein RadC [Bacteroides sp. 3_1_19]
          Length = 225

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI     S G I+  PV IR I+++ L  +A S I+VHNHPSG   PS AD 
Sbjct: 126 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMRQALYYNAVSFIMVHNHPSGARKPSGADD 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L+I + DH+I+  +++ S+     +
Sbjct: 186 RLTEAVKKAAETLDIRLLDHVIVAGNSYYSYADEGRL 222


>gi|17229843|ref|NP_486391.1| DNA repair protein RadC [Nostoc sp. PCC 7120]
 gi|25009016|sp|Q8YUJ5|Y2351_ANASP RecName: Full=UPF0758 protein alr2351
 gi|17131443|dbj|BAB74050.1| DNA repair protein [Nostoc sp. PCC 7120]
          Length = 243

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 47/93 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+  +V + GT        REI +  +   AT  I+ HNHPSGN  PS  DI
Sbjct: 139 LLLDVKNRLLGTQVITIGTATETLASPREIFREIIRQGATRTIVAHNHPSGNVEPSPEDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T+ ++     L I + DH+I+G     S + 
Sbjct: 199 ELTRQLLAGAQLLGIPLLDHLILGNGNHQSLRE 231


>gi|89891670|ref|ZP_01203173.1| DNA repair protein, RadC [Flavobacteria bacterium BBFL7]
 gi|89516005|gb|EAS18669.1| DNA  repair protein, RadC [Flavobacteria bacterium BBFL7]
          Length = 232

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+++  + ++A    SRG      V  R + Q+ +E +A ++IL HNHPSG   PS  D 
Sbjct: 136 LYVNNSHKVLAKHQISRGGFTGTMVDTRIVFQKAVEEAAVAMILAHNHPSGKLMPSMDDK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +I     +++ V DHII+ +D+F SF    ++
Sbjct: 196 RLTQKLIEAGRIMDVKVLDHIIVTRDSFYSFADHNLL 232


>gi|332181204|gb|AEE16892.1| DNA repair protein RadC [Treponema brennaborense DSM 12168]
          Length = 221

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 52/95 (54%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+    +I     S GTI+   V+ RE+    ++  A ++IL HNHPSG+  PS+ DI  
Sbjct: 121 LNGAYEIIKIRSVSVGTINRTVVHPREVFTDAVKDMAAAVILCHNHPSGSEAPSETDIET 180

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++     + I + DHII+ +  + SFK   +I
Sbjct: 181 TEKLMIAAEYIGIKILDHIIVTQKTYYSFKEHNLI 215


>gi|229082892|ref|ZP_04215316.1| DNA repair protein [Bacillus cereus Rock4-2]
 gi|228700430|gb|EEL52992.1| DNA repair protein [Bacillus cereus Rock4-2]
          Length = 150

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 52/95 (54%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +I   +   GT+D   V+ RE  +  +  +A+SI+  HNHPSG+   S  D+ +
Sbjct: 56  LNTKNEIIGCSIVFEGTVDSSLVHPRETFRTAILNNASSIVCFHNHPSGHSMESQEDVEV 115

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +      + I + DH+IIG +++VS     II
Sbjct: 116 TKRLKECGIIIGIPLLDHVIIGDNSYVSLLKKGII 150


>gi|229113151|ref|ZP_04242647.1| DNA repair protein [Bacillus cereus Rock1-15]
 gi|228670298|gb|EEL25645.1| DNA repair protein [Bacillus cereus Rock1-15]
          Length = 146

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 54/95 (56%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +I   + S+G+I+   V  RE  +  +  +A SI+  HNHPSG+P+ S  D+ +
Sbjct: 51  LNTKNEIIGCSIVSQGSINSSIVSPRETFRTAILNNAASIVCFHNHPSGSPDASPEDLEV 110

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++     L I + DH+IIG+  FVS +    I
Sbjct: 111 TKRLVECGKILGIELIDHVIIGEHRFVSLREKGCI 145


>gi|324323759|gb|ADY24803.1| DNA repair protein [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 151

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 54/95 (56%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +I   + S+G+I+   V  RE  +  +  +A SI+  HNHPSG+P+ S  D+ +
Sbjct: 56  LNTKNEIIGCSIVSQGSINSSIVSPRETFRTAILNNAASIVCFHNHPSGSPDASPEDLEV 115

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++     L I + DH+IIG+  FVS +    I
Sbjct: 116 TKRLVECGKILGIELIDHVIIGEHRFVSLREKGCI 150


>gi|313896811|ref|ZP_07830358.1| DNA repair protein RadC [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974258|gb|EFR39726.1| DNA repair protein RadC [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 228

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 54/95 (56%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L   N +I +   SRGT+    V+ RE+    +  +A  +ILVHNHPSG+P PS  D  +
Sbjct: 134 LTSKNDIIMEAEVSRGTLTRTLVHPREVFVPAIRCAAARVILVHNHPSGDPMPSAEDHRI 193

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++     L+I V DHI++G + + SF    +I
Sbjct: 194 TRILVEAGRLLSIPVVDHIVLGSEGYYSFAEHGLI 228


>gi|170722464|ref|YP_001750152.1| DNA repair protein RadC [Pseudomonas putida W619]
 gi|169760467|gb|ACA73783.1| DNA repair protein RadC [Pseudomonas putida W619]
          Length = 164

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +++ ++   G+ID   VY R++V + LE +A ++I  HNHPSG   PS AD 
Sbjct: 68  LCLDSRHRVLSFDILFTGSIDGASVYPRQVVIKALERNAAAVIFSHNHPSGCSEPSGADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  + + V DHII+G+   +S      +
Sbjct: 128 VLTTRLTEALALVEVRVLDHIIVGEGTPLSLAEYGWM 164


>gi|189461007|ref|ZP_03009792.1| hypothetical protein BACCOP_01654 [Bacteroides coprocola DSM 17136]
 gi|198277711|ref|ZP_03210242.1| hypothetical protein BACPLE_03934 [Bacteroides plebeius DSM 17135]
 gi|237712962|ref|ZP_04543443.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|237717796|ref|ZP_04548277.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|319643863|ref|ZP_07998456.1| hypothetical protein HMPREF9011_04059 [Bacteroides sp. 3_1_40A]
 gi|189432346|gb|EDV01331.1| hypothetical protein BACCOP_01654 [Bacteroides coprocola DSM 17136]
 gi|198269408|gb|EDY93678.1| hypothetical protein BACPLE_03934 [Bacteroides plebeius DSM 17135]
 gi|229446937|gb|EEO52728.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229452895|gb|EEO58686.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|317384604|gb|EFV65569.1| hypothetical protein HMPREF9011_04059 [Bacteroides sp. 3_1_40A]
          Length = 220

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI     S G I+  PV IR I+++ L  +A S I+VHNHPSG   PS AD 
Sbjct: 121 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADD 180

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L+I + DH+I+  + + S+     +
Sbjct: 181 RLTEAVKKAAETLDIRLVDHVIVAGNNYYSYADEGRL 217


>gi|56459745|ref|YP_155026.1| RadC family protein [Idiomarina loihiensis L2TR]
 gi|56178755|gb|AAV81477.1| RadC family protein [Idiomarina loihiensis L2TR]
          Length = 158

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD+    I       GTI+   VY RE+V+  LE  A+S++L HNHPSG   PS+ADI
Sbjct: 63  IFLDEKGHFIEYRELFYGTINAASVYPREVVRAALETKASSLVLSHNHPSGEAEPSNADI 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DHI++GK   VSF    ++
Sbjct: 123 RLTERLQKALAVIDVEVKDHIVVGK-ECVSFSERGLL 158


>gi|325528992|gb|EGD06011.1| hypothetical protein B1M_03557 [Burkholderia sp. TJI49]
          Length = 230

 Score =  116 bits (292), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REI +R L L+A + I+ HNHPSG   PS  D 
Sbjct: 134 LYLDARHCLIDVEESARGSLTRMAVYPREIARRALTLNAAAAIVAHNHPSGAVRPSAEDR 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++  + DH+++G     SF     +
Sbjct: 194 RLTRVLRDALALIDTRLLDHVVVGVGDTFSFARAGWL 230


>gi|171779331|ref|ZP_02920295.1| hypothetical protein STRINF_01176 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281948|gb|EDT47379.1| hypothetical protein STRINF_01176 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 226

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I       G++       REI+    +  ATS+I++HNHPSG+P PS+ D+
Sbjct: 129 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIIHNHPSGSPAPSENDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ +    + + I+  DHII+GK  + SF+  
Sbjct: 189 RFTEKMKRACDDIGIVCLDHIIVGKYQYYSFREE 222


>gi|259501659|ref|ZP_05744561.1| DNA repair protein RadC [Lactobacillus iners DSM 13335]
 gi|302191133|ref|ZP_07267387.1| DNA repair protein RadC [Lactobacillus iners AB-1]
 gi|309806315|ref|ZP_07700328.1| DNA repair protein RadC family protein [Lactobacillus iners LactinV
           03V1-b]
 gi|312871933|ref|ZP_07732015.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|312873222|ref|ZP_07733278.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF
           2052A-d]
 gi|312874651|ref|ZP_07734675.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF
           2053A-b]
 gi|315653722|ref|ZP_07906642.1| DNA repair protein RadC [Lactobacillus iners ATCC 55195]
 gi|325911720|ref|ZP_08174127.1| DNA repair protein RadC family protein [Lactobacillus iners UPII
           143-D]
 gi|329921048|ref|ZP_08277571.1| DNA repair protein RadC family protein [Lactobacillus iners SPIN
           1401G]
 gi|259166944|gb|EEW51439.1| DNA repair protein RadC [Lactobacillus iners DSM 13335]
 gi|308167299|gb|EFO69465.1| DNA repair protein RadC family protein [Lactobacillus iners LactinV
           03V1-b]
 gi|311089881|gb|EFQ48301.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF
           2053A-b]
 gi|311091233|gb|EFQ49621.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF
           2052A-d]
 gi|311092510|gb|EFQ50872.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|315489084|gb|EFU78726.1| DNA repair protein RadC [Lactobacillus iners ATCC 55195]
 gi|325476486|gb|EGC79645.1| DNA repair protein RadC family protein [Lactobacillus iners UPII
           143-D]
 gi|328934955|gb|EGG31444.1| DNA repair protein RadC family protein [Lactobacillus iners SPIN
           1401G]
          Length = 205

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +++D  N +IA++V  +GT++   ++ R+I +  +  +A    L HNHPS +  PS+ DI
Sbjct: 109 VYVDVKNKIIAEKVIFKGTLNQAIIHPRDIFRWAIIYNAAGFFLAHNHPSEDLTPSEQDI 168

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I +    + I   DH I+    ++SFK + ++
Sbjct: 169 QVTKKISSVSECMGIRFLDHFIVNTGNYLSFKEMELL 205


>gi|159897836|ref|YP_001544083.1| DNA repair protein RadC [Herpetosiphon aurantiacus ATCC 23779]
 gi|159890875|gb|ABX03955.1| DNA repair protein RadC [Herpetosiphon aurantiacus ATCC 23779]
          Length = 231

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 59/94 (62%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N ++  E  + G+++   V I E+ +  + L+A +II+VHNHPSG+P PS  DI +
Sbjct: 135 LNTKNHVLKIENVTIGSLNSASVRIAEVFREPIRLNAAAIIVVHNHPSGDPTPSPDDILV 194

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           T+ +I     L+I V DH++IG+  +VS +  R+
Sbjct: 195 TKQLIQAGQLLDIDVLDHLVIGQARWVSMRERRL 228


>gi|152993869|ref|YP_001359590.1| DNA repair protein RadC [Sulfurovum sp. NBC37-1]
 gi|151425730|dbj|BAF73233.1| DNA repair protein RadC [Sulfurovum sp. NBC37-1]
          Length = 219

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 48/95 (50%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  + +I       GT++   V+ RE+    +   A  II+ HNHPSG    S ADI +
Sbjct: 125 LDGASHIINTRTVFIGTLNQSLVHPREVFSDAISDRAAGIIIAHNHPSGTLESSRADIQI 184

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           TQ +      + I + DH+I+ K+ + SF    ++
Sbjct: 185 TQRLKEVSKLVGIELLDHVILSKNGYYSFSDEGLL 219


>gi|149199804|ref|ZP_01876834.1| DNA repair protein RadC [Lentisphaera araneosa HTCC2155]
 gi|149137092|gb|EDM25515.1| DNA repair protein RadC [Lentisphaera araneosa HTCC2155]
          Length = 235

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 6/103 (5%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+     S G +D   V+ RE+ +  L      IIL HNHPSG+P+PS  DI
Sbjct: 131 LLLDTKNRLMRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPSPSPQDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKD------AFVSFKGLRII 97
             T+N+I     L + V DH+IIG         FVS + L ++
Sbjct: 191 ECTKNLIEAGEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233


>gi|146298177|ref|YP_001192768.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101]
 gi|229485553|sp|A5FMW5|Y413_FLAJ1 RecName: Full=UPF0758 protein Fjoh_0413
 gi|146152595|gb|ABQ03449.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101]
          Length = 229

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I+    S+G I    V +R + +  LE  AT +IL HNHPSG  NPS AD 
Sbjct: 133 LFLNNSNKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHPSGELNPSQADK 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ I T    L++ + DH+II +  + SF    I
Sbjct: 193 QITKKIKTAGEILDVKILDHLIITETKYYSFVDEGI 228


>gi|126662279|ref|ZP_01733278.1| DNA repair protein [Flavobacteria bacterium BAL38]
 gi|126625658|gb|EAZ96347.1| DNA repair protein [Flavobacteria bacterium BAL38]
          Length = 227

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I     S+G I    V IR + +   E +AT +IL HNHPSG    S+AD+
Sbjct: 131 LYLNNSNKVIYKAQLSKGGITGTVVDIRIVFKMAFEQNATGLILSHNHPSGKLIASEADL 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ I      L I V DH+II ++ ++SF+   I
Sbjct: 191 KITKRIKEAGQTLEIQVLDHLIITENGYLSFQDEGI 226


>gi|68171315|ref|ZP_00544714.1| DNA repair protein RadC [Ehrlichia chaffeensis str. Sapulpa]
 gi|88658430|ref|YP_507183.1| DNA repair protein RadC [Ehrlichia chaffeensis str. Arkansas]
 gi|67999266|gb|EAM85917.1| DNA repair protein RadC [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599887|gb|ABD45356.1| DNA repair protein RadC [Ehrlichia chaffeensis str. Arkansas]
          Length = 230

 Score =  116 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 63/97 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+    L+ADE Q  GT++  P+Y+REI+++ L L ATSII+ HNHPSG+  PS ADI
Sbjct: 134 LYLNTKYKLLADETQDVGTVNQTPLYVREIIKKSLFLEATSIIIAHNHPSGDAKPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +    + + I + DH+I+  +A  SFK   ++
Sbjct: 194 EITNQLARACSDVGITLIDHVIVTSNAHYSFKTHNLL 230


>gi|300088789|ref|YP_003759311.1| DNA repair protein RadC [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528522|gb|ADJ26990.1| DNA repair protein RadC [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 263

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++     S+GT++   V++RE+V+R L L A ++I VHNHPSG P PS  D 
Sbjct: 153 LYLNSQNRIMEIAEMSQGTVNASVVWVREVVERALRLGAAAMIFVHNHPSGVPAPSRQDR 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T++++     +NI   DHIIIG + + S     ++
Sbjct: 213 DITRDLVFAAATMNIRALDHIIIGDNCYHSLASEGLL 249


>gi|325287028|ref|YP_004262818.1| DNA repair protein RadC [Cellulophaga lytica DSM 7489]
 gi|324322482|gb|ADY29947.1| DNA repair protein RadC [Cellulophaga lytica DSM 7489]
          Length = 232

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I     S+G I    V +R ++++ LE+ A  +IL HNHPSG   PS AD 
Sbjct: 136 IYLNNSNKVIHQAQLSKGGITGTLVDVRLVLKQALEIGAIGLILAHNHPSGGLKPSTADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L++ V DHIII +  + SF    ++
Sbjct: 196 QITEKLKNAAAALDMKVLDHIIITQREYFSFADDNLL 232


>gi|312871642|ref|ZP_07731734.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF
           3008A-a]
 gi|311092867|gb|EFQ51219.1| DNA repair protein RadC family protein [Lactobacillus iners LEAF
           3008A-a]
          Length = 205

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +++D  N +IA++V  +GT++   ++ R+I +  +  +A    L HNHPS +  PS+ DI
Sbjct: 109 VYVDVKNKIIAEKVIFKGTLNQAIIHPRDIFRWAIIYNAAGFFLAHNHPSEDLTPSEQDI 168

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I +    + I   DH I+    ++SFK + ++
Sbjct: 169 QVTKKISSVSECMGIRFLDHFIVNTGNYLSFKEMELL 205


>gi|225024085|ref|ZP_03713277.1| hypothetical protein EIKCOROL_00953 [Eikenella corrodens ATCC
           23834]
 gi|224943110|gb|EEG24319.1| hypothetical protein EIKCOROL_00953 [Eikenella corrodens ATCC
           23834]
          Length = 233

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L   + LIA +  SRGT+    VYIRE+ +  L   A S+I+ HNHP G+  PS AD+
Sbjct: 128 MLLSSSHKLIAFQELSRGTVAENTVYIREVAKLALRYHAASLIIAHNHPGGSTEPSSADL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   L  L++ + DH I+  +  VSF     +
Sbjct: 188 AFTRRLQQALALLDVRLLDHFIVAGNRAVSFAANGWM 224


>gi|83649174|ref|YP_437609.1| DNA repair protein [Hahella chejuensis KCTC 2396]
 gi|83637217|gb|ABC33184.1| DNA repair protein [Hahella chejuensis KCTC 2396]
          Length = 123

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I  ++  RGT +   V+ REI ++ L L+A ++IL HNHPS N  PS  DI
Sbjct: 27  LFLDNQHRVIEFDLMFRGTYNESTVHTREIAKKALSLNAAAVILAHNHPSQNARPSQRDI 86

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +  TL+ L + V DH+IIG     SF    I+
Sbjct: 87  RLTREVKRTLDLLEVRVLDHVIIGGMEEFSFVENGIL 123


>gi|324992861|gb|EGC24781.1| DNA repair protein RadC [Streptococcus sanguinis SK405]
 gi|325687499|gb|EGD29520.1| DNA repair protein RadC [Streptococcus sanguinis SK72]
 gi|325696545|gb|EGD38435.1| DNA repair protein RadC [Streptococcus sanguinis SK160]
 gi|327460312|gb|EGF06649.1| DNA repair protein RadC [Streptococcus sanguinis SK1057]
 gi|327462168|gb|EGF08495.1| DNA repair protein RadC [Streptococcus sanguinis SK1]
 gi|327474473|gb|EGF19879.1| DNA repair protein RadC [Streptococcus sanguinis SK408]
          Length = 227

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N ++  +    GT+       REI+   L+  ATSIILVHNHPSG+  PS  D 
Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +TQ++      + +++ DH+I+ K  + S++  
Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223


>gi|257126874|ref|YP_003164988.1| DNA repair protein RadC [Leptotrichia buccalis C-1013-b]
 gi|257050813|gb|ACV39997.1| DNA repair protein RadC [Leptotrichia buccalis C-1013-b]
          Length = 240

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N L+ +E    GTID   +YIRE++++ LE +A S+ILVHNHP+G+  PSD+DI
Sbjct: 144 LFLNTQNELMKEEELFYGTIDRSTIYIRELIKKILEYNAKSVILVHNHPAGSLKPSDSDI 203

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I + DH+II +  + SF    I+
Sbjct: 204 LLTKKVKEVFESMEIRLLDHLIISEQGYFSFLEGGIL 240


>gi|326801342|ref|YP_004319161.1| DNA repair protein RadC [Sphingobacterium sp. 21]
 gi|326552106|gb|ADZ80491.1| DNA repair protein RadC [Sphingobacterium sp. 21]
          Length = 233

 Score =  116 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 54/95 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+ +N +IA E+ S+G    V V  + + Q  L+  AT +IL HNHPSG+  PS AD 
Sbjct: 137 LLLNTNNRVIAKELISKGGSGVVAVDAKGVFQAVLQAKATGLILSHNHPSGSLRPSMADK 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ I+     L++ V DH+II  + + SF    
Sbjct: 197 QLTKKIVEGGKLLDVRVLDHLIISDEGYYSFLDHG 231


>gi|323442950|gb|EGB00573.1| DNA repair protein RadC [Staphylococcus aureus O46]
          Length = 223

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 49/96 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNH SG+  PS  DI
Sbjct: 123 LLLNSKNVVIKESCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHSSGDVTPSQEDI 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG + F S      
Sbjct: 183 ITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 218


>gi|71908755|ref|YP_286342.1| DNA repair protein RadC [Dechloromonas aromatica RCB]
 gi|123626759|sp|Q47BA9|Y3142_DECAR RecName: Full=UPF0758 protein Daro_3142
 gi|71848376|gb|AAZ47872.1| DNA replication and repair protein RadC [Dechloromonas aromatica
           RCB]
          Length = 226

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+  E    GT+    VY RE+V+  L  +A ++IL HNHPSG   PS AD 
Sbjct: 129 LWLDAQNQLLKAEELFTGTLTQTSVYPREVVKAALAHNAAAVILAHNHPSGIAEPSRADE 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRII 97
            +T+++   L  +++ V DH I+  +   +SF    ++
Sbjct: 189 MLTRSLKEALAMVDVKVLDHFIVAGNTPPLSFAERGLL 226


>gi|328946264|gb|EGG40408.1| DNA repair protein RadC [Streptococcus sanguinis SK1087]
          Length = 227

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N ++  +    GT+       REI+   L+  ATSIILVHNHPSG+  PS  D 
Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +TQ++      + +++ DH+I+ K  + S++  
Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223


>gi|327469997|gb|EGF15461.1| DNA repair protein RadC [Streptococcus sanguinis SK330]
          Length = 227

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N ++  +    GT+       REI+   L+  ATSIILVHNHPSG+  PS  D 
Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +TQ++      + +++ DH+I+ K  + S++  
Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223


>gi|299147411|ref|ZP_07040476.1| DNA repair protein RadC [Bacteroides sp. 3_1_23]
 gi|298514689|gb|EFI38573.1| DNA repair protein RadC [Bacteroides sp. 3_1_23]
          Length = 148

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N ++     S G I    V +R I+Q  L  ++ S+IL HNHPSGN  PS  DI
Sbjct: 52  LFLNQANQVLGYTQISEGGITETSVDVRMILQAALLTNSVSLILAHNHPSGNLKPSTLDI 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + I V DHII+  +++ SF     +
Sbjct: 112 ELTRCIKEAAKLMRINVLDHIIMTSESYYSFSDEGTL 148


>gi|254520654|ref|ZP_05132710.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA]
 gi|226914403|gb|EEH99604.1| DNA repair protein RadC [Clostridium sp. 7_2_43FAA]
          Length = 142

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 57/96 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            +D  N   +  V S GT++   V+ RE+ +  +  ++ SII+ HNHPSG+P PS+ DIN
Sbjct: 47  CMDIKNQPTSINVVSIGTLNSSLVHPREVFKVAILANSASIIVAHNHPSGDPTPSEEDIN 106

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T  +      + I + DH+IIG++  +SFK   I+
Sbjct: 107 ITIRLKEAGKIIGIDILDHVIIGENKHISFKEKGIL 142


>gi|319947102|ref|ZP_08021336.1| DNA repair protein RadC [Streptococcus australis ATCC 700641]
 gi|319747150|gb|EFV99409.1| DNA repair protein RadC [Streptococcus australis ATCC 700641]
          Length = 227

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 55/94 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +V   GT++      REI+   ++  ATS+ILVHNHPSG  +PS  D 
Sbjct: 129 LYLNTQNQIIHQQVIFIGTVNRSIAEPREILHYAIKHMATSLILVHNHPSGIIHPSKNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +TQ +I   N L I+  DH+I+  D + S++  
Sbjct: 189 GVTQQMIEACNCLGIVFLDHLIVSTDDYYSYREE 222


>gi|125718039|ref|YP_001035172.1| DNA repair protein RadC [Streptococcus sanguinis SK36]
 gi|229485572|sp|A3CN67|Y1218_STRSV RecName: Full=UPF0758 protein SSA_1218
 gi|125497956|gb|ABN44622.1| DNA repair protein radC, putative [Streptococcus sanguinis SK36]
          Length = 227

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N ++  +    GT+       REI+   L+  ATSIILVHNHPSG+  PS  D 
Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +TQ++      + +++ DH+I+ K  + S++  
Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223


>gi|171316763|ref|ZP_02905975.1| DNA repair protein RadC [Burkholderia ambifaria MEX-5]
 gi|171098113|gb|EDT42928.1| DNA repair protein RadC [Burkholderia ambifaria MEX-5]
          Length = 258

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+R L L+A ++I+ HNHPSG   PS  D 
Sbjct: 162 LYLDARHGLIDVEESARGSLTRMAVYPREIVRRALVLNAAALIVAHNHPSGAVQPSAEDR 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++  + DH+++G     SF     +
Sbjct: 222 RLTRVLHEALALIDAKLLDHVVVGTADTFSFARAGWL 258


>gi|73749140|ref|YP_308379.1| RadC family DNA repair protein [Dehalococcoides sp. CBDB1]
 gi|289433114|ref|YP_003462987.1| DNA repair protein RadC [Dehalococcoides sp. GT]
 gi|73660856|emb|CAI83463.1| DNA repair protein, RadC family [Dehalococcoides sp. CBDB1]
 gi|288946834|gb|ADC74531.1| DNA repair protein RadC [Dehalococcoides sp. GT]
          Length = 272

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + ++       GT+    +  RE++   +  +A+++I VHNHPSG   PS AD 
Sbjct: 143 IYLDSQHRVLDVADLFCGTVASGCIVPREVIAAAISKNASALIFVHNHPSGKTEPSQADK 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ ++     + I   DHIIIG + + SF    I+
Sbjct: 203 DVTRELVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 239


>gi|25011219|ref|NP_735614.1| DNA repair protein RadC [Streptococcus agalactiae NEM316]
 gi|76797900|ref|ZP_00780162.1| DNA repair protein radC-like protein [Streptococcus agalactiae
           18RS21]
 gi|77408712|ref|ZP_00785444.1| DNA repair protein RadC [Streptococcus agalactiae COH1]
 gi|77410546|ref|ZP_00786907.1| DNA repair protein RadC [Streptococcus agalactiae CJB111]
 gi|39931967|sp|Q8E564|Y1168_STRA3 RecName: Full=UPF0758 protein gbs1168
 gi|23095643|emb|CAD46827.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76586737|gb|EAO63233.1| DNA repair protein radC-like protein [Streptococcus agalactiae
           18RS21]
 gi|77163494|gb|EAO74444.1| DNA repair protein RadC [Streptococcus agalactiae CJB111]
 gi|77172687|gb|EAO75824.1| DNA repair protein RadC [Streptococcus agalactiae COH1]
          Length = 226

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 58/94 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +++D  N +I       GT+       REI+    +  ATS+I++HNHPSG+PNPS++D+
Sbjct: 129 IYMDTQNRIIEQRTIFIGTVRRSVAEPREILHYACKNMATSLIIIHNHPSGSPNPSESDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           + T+ I  + + L I+  DHII+GK+ + SF+  
Sbjct: 189 SFTKKIKRSCDHLGIVCLDHIIVGKNKYYSFREE 222


>gi|237756348|ref|ZP_04584898.1| DNA repair protein RadC [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691499|gb|EEP60557.1| DNA repair protein RadC [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 152

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA EV ++G+++ V V  R+I+   ++ +   II+ HNHP+ +P PS  DI
Sbjct: 56  LYLNSSNHLIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQEDI 115

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ + T  N L   + DHII+GK  F SF    +I
Sbjct: 116 EFTKKLQTLANELGFDLLDHIIVGKKDFYSFAKEGLI 152


>gi|255994109|ref|ZP_05427244.1| DNA repair protein RadC [Eubacterium saphenum ATCC 49989]
 gi|255993777|gb|EEU03866.1| DNA repair protein RadC [Eubacterium saphenum ATCC 49989]
          Length = 230

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+    +IA E  S G +     + RE+ +  ++ +A+S+ILVHNHPSG   PSD D+
Sbjct: 128 VMLNTAKHVIAKERISIGGLACAYAHPREVFKSAIKKAASSVILVHNHPSGCVTPSDEDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     + I V DHIIIG + ++S K    I
Sbjct: 188 LITKRLINAGRIIGIEVIDHIIIGNENYLSMKKEGYI 224


>gi|269836380|ref|YP_003318608.1| DNA repair protein RadC [Sphaerobacter thermophilus DSM 20745]
 gi|269785643|gb|ACZ37786.1| DNA repair protein RadC [Sphaerobacter thermophilus DSM 20745]
          Length = 240

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 55/94 (58%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N ++      +G+++   V + E+ +  + L+A +I ++HNHPSG+P PS AD+ +
Sbjct: 140 LDTKNRVLRTVTLYQGSVNSAQVRVAEVFRDAVRLNAPAIAILHNHPSGDPTPSAADVAL 199

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           T  ++     L I + DH+I+G + F S + + +
Sbjct: 200 TAQLVQAAQLLGIDLLDHLIVGHNQFRSLRRMGL 233


>gi|298375029|ref|ZP_06984986.1| DNA repair protein RadC [Bacteroides sp. 3_1_19]
 gi|298267529|gb|EFI09185.1| DNA repair protein RadC [Bacteroides sp. 3_1_19]
          Length = 225

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI     S G I+  PV IR I+++ L  +A S I+VHNHPSG   PS AD 
Sbjct: 126 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADD 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L+I + DH+I+  + + S+     +
Sbjct: 186 RLTEAVKKAAETLDIRLLDHVIVAGNIYYSYADEGRL 222


>gi|313891737|ref|ZP_07825342.1| DNA repair protein RadC [Dialister microaerophilus UPII 345-E]
 gi|313119731|gb|EFR42918.1| DNA repair protein RadC [Dialister microaerophilus UPII 345-E]
          Length = 227

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 53/96 (55%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +L+  N L+     +RG +    V I+E ++  L   A +IILVHNHPSG P+PS  DI 
Sbjct: 132 YLNIKNKLLGYREITRGGLQETVVDIKEALKWALRFKAYAIILVHNHPSGVPDPSREDIR 191

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            T+  +     L+I+V DHIIIG   F S   +  +
Sbjct: 192 TTERFVKAGKILDIVVLDHIIIGDGNFKSLAEMGYV 227


>gi|58337108|ref|YP_193693.1| DNA repair protein [Lactobacillus acidophilus NCFM]
 gi|227903680|ref|ZP_04021485.1| DNA repair protein [Lactobacillus acidophilus ATCC 4796]
 gi|58254425|gb|AAV42662.1| DNA repair protein [Lactobacillus acidophilus NCFM]
 gi|227868567|gb|EEJ75988.1| DNA repair protein [Lactobacillus acidophilus ATCC 4796]
          Length = 207

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L++D  N +IA++   +GT++    + REI +  +    + I +VHNHPSG   PS +D 
Sbjct: 111 LYIDNSNHIIAEKKLFQGTLNRSFAHPREIFRWAVIYGCSGIFIVHNHPSGKLTPSSSDF 170

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+++      + I   DH I+G+  ++S +  ++
Sbjct: 171 ELTEDLFEAAKMMKIDFLDHFIVGQGRYLSMREEKL 206


>gi|319410519|emb|CBY90882.1| putative DNA repair protein RadC [Neisseria meningitidis WUE 2594]
          Length = 225

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+P PS  DI
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   ++ +++ + DH I+      SF+   ++
Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTAQTVRSFRQFGLM 224


>gi|325694464|gb|EGD36373.1| DNA repair protein RadC [Streptococcus sanguinis SK150]
          Length = 227

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N ++  +    GT+       REI+   L+  ATSIILVHNHPSG+  PS  D 
Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +TQ++      + +++ DH+I+ K  + S++  
Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223


>gi|269203278|ref|YP_003282547.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ED98]
 gi|296274911|ref|ZP_06857418.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus MR1]
 gi|262075568|gb|ACY11541.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ED98]
          Length = 228

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 49/96 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L   + DHIIIG + F S      
Sbjct: 188 ITTMRLKECGLILGKDLLDHIIIGDNRFTSLVEAGY 223


>gi|320530858|ref|ZP_08031895.1| putative DNA repair protein RadC [Selenomonas artemidis F0399]
 gi|320136892|gb|EFW28837.1| putative DNA repair protein RadC [Selenomonas artemidis F0399]
          Length = 228

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 54/95 (56%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L   N +I +   SRGT+    V+ RE+    +  +A  IILVHNHPSG+P PS  D  +
Sbjct: 134 LTSKNDIIMEAEVSRGTLTRTLVHPREVFVPAIRCAAARIILVHNHPSGDPMPSAEDHRI 193

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++     L+I V DHI++G + + SF    +I
Sbjct: 194 TRILVEAGRLLSIPVVDHIVLGSEGYYSFAEHGLI 228


>gi|300071102|gb|ADJ60502.1| DNA repair protein RadC [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 217

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 47/93 (50%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD  N +I  +    G  +H     REI+   ++  +  +++ HNHPSGN  PS AD  
Sbjct: 120 YLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQPSQADKI 179

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            T+ I    + + I   DHII+G   + SF+  
Sbjct: 180 FTKKIKNACDNIGINFIDHIIVGAGNYYSFRER 212


>gi|253723696|ref|YP_003023982.1| RadC DNA repair protein [Photobacterium damselae subsp. piscicida]
 gi|251752760|dbj|BAH83633.1| RadC DNA repair protein [Photobacterium damselae subsp. piscicida]
          Length = 156

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI      +GTID   VY RE+V+  L+ +  ++IL HNHPSG   PS +D 
Sbjct: 60  LILDNQHRLIEAVELFQGTIDSASVYPREVVKSVLKHNGAAVILAHNHPSGVATPSSSDR 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I   L  +++   DHI++  +   +F    II
Sbjct: 120 RITRRIKDALELVDVRTLDHIVVSVEETYAFSEHGII 156


>gi|147669902|ref|YP_001214720.1| DNA repair protein RadC [Dehalococcoides sp. BAV1]
 gi|146270850|gb|ABQ17842.1| DNA repair protein RadC [Dehalococcoides sp. BAV1]
          Length = 272

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + ++       GT+    +  RE++   +  +A+++I VHNHPSG   PS AD 
Sbjct: 143 IYLDSQHRVLDVADLFCGTVASGCIVPREVIAAAISKNASALIFVHNHPSGKTEPSQADK 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ ++     + I   DHIIIG + + SF    I+
Sbjct: 203 DVTRELVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 239


>gi|314933816|ref|ZP_07841181.1| DNA repair protein RadC [Staphylococcus caprae C87]
 gi|313653966|gb|EFS17723.1| DNA repair protein RadC [Staphylococcus caprae C87]
          Length = 227

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 49/96 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I      +GT++   ++ RE+    +  S+ +II+VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNKVIKQSWIFKGTLNSSIIHPREVFNIAIRESSNAIIIVHNHPSGDVTPSREDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I V DHIIIG + F S      
Sbjct: 188 TTTLRLKECGAILGIDVLDHIIIGDNQFTSLVEAGY 223


>gi|324991114|gb|EGC23048.1| DNA repair protein RadC [Streptococcus sanguinis SK353]
 gi|324994499|gb|EGC26412.1| DNA repair protein RadC [Streptococcus sanguinis SK678]
          Length = 227

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N ++  +    GT+       REI+   L+  ATSIILVHNHPSG+  PS  D 
Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVIPSRNDD 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +TQ++      + +++ DH+I+ K  + S++  
Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKSNYYSYREE 223


>gi|237725031|ref|ZP_04555512.1| DNA repair protein [Bacteroides sp. D4]
 gi|229436769|gb|EEO46846.1| DNA repair protein [Bacteroides dorei 5_1_36/D4]
          Length = 153

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N ++   + S G I    V +R I+Q  L  ++ ++IL HNHPSGN  PS  D+
Sbjct: 57  LFLNQSNKVLGYTLISEGGITDTTVDVRVILQAALLTNSIALILAHNHPSGNLKPSRQDM 116

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I V DH+I+    + SF     +
Sbjct: 117 EITKQVKEAARLMRITVTDHLILTDAGYYSFADEGQL 153


>gi|270308617|ref|YP_003330675.1| DNA repair protein [Dehalococcoides sp. VS]
 gi|270154509|gb|ACZ62347.1| DNA repair protein [Dehalococcoides sp. VS]
          Length = 275

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + ++       GT+    +  RE++   +  +A+++I VHNHPSG   PS AD 
Sbjct: 146 IYLDSQHRVLELADLFTGTVASGSIVPREVIAAAISQNASALIFVHNHPSGKIEPSQADK 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ ++     + I   DHIIIG + + SF    I+
Sbjct: 206 DVTRELVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 242


>gi|239625122|ref|ZP_04668153.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519352|gb|EEQ59218.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 159

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 51/95 (53%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L      +A E+ + G ++   V +R+I +  L  +A  +I  HNHPSG+P P  AD  +
Sbjct: 56  LSTKLEPLALEIAAVGGLNTCSVDVRDIFKHSLLNNAAYVICFHNHPSGDPEPGLADKQI 115

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ I      L I + DHII+G+  F SF+   +I
Sbjct: 116 TRKIEDGGQLLGIPLIDHIIVGETGFYSFRENGLI 150


>gi|170697688|ref|ZP_02888776.1| DNA repair protein RadC [Burkholderia ambifaria IOP40-10]
 gi|170137436|gb|EDT05676.1| DNA repair protein RadC [Burkholderia ambifaria IOP40-10]
          Length = 258

 Score =  115 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+R L L+A ++I+ HNHPSG   PS  D 
Sbjct: 162 LYLDARHGLIDVEESARGSLTRLAVYPREIVRRALVLNAAALIIAHNHPSGAVQPSAEDR 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++  + DH+++G     SF     +
Sbjct: 222 RLTRVLHEALALVDAKLLDHVVVGTADTFSFARAGWL 258


>gi|325294835|ref|YP_004281349.1| DNA repair protein RadC [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065283|gb|ADY73290.1| DNA repair protein RadC [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 226

 Score =  115 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 54/95 (56%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+    LI+    ++G ++   +  +E+    ++  A ++IL HNHPSG+P PS  DI +
Sbjct: 132 LNTKGKLISIHEITKGGMNFTSISPKEVFHPAVKDMAAAVILFHNHPSGDPTPSKEDIEV 191

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ I+     L I V DHI++  +++ SFK   ++
Sbjct: 192 TKRILEGAYLLEIEVLDHIVLSSNSYFSFKKEGLL 226


>gi|269123054|ref|YP_003305631.1| DNA repair protein RadC [Streptobacillus moniliformis DSM 12112]
 gi|268314380|gb|ACZ00754.1| DNA repair protein RadC [Streptobacillus moniliformis DSM 12112]
          Length = 211

 Score =  115 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+ +  N+LI DE    GTID   VY+REIV+  L+ +A SII+VHNHPSGN  PS+ D 
Sbjct: 115 LYFNTKNVLIKDENIFYGTIDKSVVYVREIVKNILKYNAKSIIIVHNHPSGNLEPSNDDR 174

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II  L  +++ + DHIII    + SF     I
Sbjct: 175 CLTKKIIDVLKLIDVRLSDHIIISNKGYYSFLENGQI 211


>gi|188585153|ref|YP_001916698.1| DNA repair protein RadC [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349840|gb|ACB84110.1| DNA repair protein RadC [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 241

 Score =  115 bits (290), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  + L+  ++ S G+++   V+ RE+  R +  SA  +ILVHNHPSG+P PS  DI
Sbjct: 145 VMLNTKSYLLKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPEPSQDDI 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF-KGLRI 96
            +T  ++   + L I + DH+IIG   F SF +   +
Sbjct: 205 KLTNRLVAAGDLLGIPIMDHVIIGHQKFYSFSRENHL 241


>gi|255530732|ref|YP_003091104.1| DNA repair protein RadC [Pedobacter heparinus DSM 2366]
 gi|255343716|gb|ACU03042.1| DNA repair protein RadC [Pedobacter heparinus DSM 2366]
          Length = 232

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N +I  ++ S+G +       + I +  LE +ATSIIL HNHPSGN  PS  D+
Sbjct: 136 LILNQANYIIGKQLISKGGMAGTVADPKVIFKTALEHNATSIILAHNHPSGNLKPSAQDL 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ ++     L++ V DH+I+    F SF    +I
Sbjct: 196 SITKKMVEAGKMLDLPVLDHLIVTNKLFFSFGDEGLI 232


>gi|46447399|ref|YP_008764.1| putative DNA repair protein radC [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|81697594|sp|Q6MAB0|Y1765_PARUW RecName: Full=UPF0758 protein pc1765
 gi|46401040|emb|CAF24489.1| putative DNA repair protein radC [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 231

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F D    LI  EV S G++    V+ RE+    +   A S+I+VHNHPSG+P PS+ D+
Sbjct: 133 IFQDTKGYLITYEVISIGSLSQTLVHPREVFYSAIRHKAASLIVVHNHPSGDPMPSNQDL 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ ++     L I + DH+IIGK+++VSFK   ++
Sbjct: 193 KLTQILLEGSRLLGIPLRDHLIIGKNSYVSFKDQNLL 229


>gi|145631180|ref|ZP_01786954.1| putative DNA repair radC-like protein [Haemophilus influenzae
           R3021]
 gi|144983278|gb|EDJ90769.1| putative DNA repair radC-like protein [Haemophilus influenzae
           R3021]
          Length = 156

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ + LI  EV  +G++  + V IREI+++ L+L+A++II+ HNHP+GN  PSDAD 
Sbjct: 60  LFLDRIHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I + DH I+   A   F    +I
Sbjct: 120 YITKRLKEACELMEIKLLDHFIVSGSASFCFTDNHLI 156


>gi|222152997|ref|YP_002562174.1| DNA repair protein RadC [Streptococcus uberis 0140J]
 gi|254789663|sp|B9DS19|Y843_STRU0 RecName: Full=UPF0758 protein SUB0843
 gi|222113810|emb|CAR41883.1| DNA repair protein RadC [Streptococcus uberis 0140J]
          Length = 226

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I ++    G++       REI+       ATS+I+VHNHPSG  NPS+ D+
Sbjct: 129 IYLDTQNRIIEEKTIFIGSVRRSIAEPREILHFACRNMATSLIVVHNHPSGLTNPSENDV 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ I  + + L I   DHII+GK  + SF+  
Sbjct: 189 AFTKKIKRSCDHLGINCLDHIIVGKKQYYSFREK 222


>gi|294012255|ref|YP_003545715.1| DNA repair protein RadC [Sphingobium japonicum UT26S]
 gi|292675585|dbj|BAI97103.1| DNA repair protein RadC [Sphingobium japonicum UT26S]
          Length = 231

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N+LI DE    G+ID   +Y RE+++R ++L + ++ILVHNHPSG+P PS  DI
Sbjct: 135 LHLNSRNMLIRDEHMGDGSIDQAAIYAREVIRRAIDLGSAALILVHNHPSGSPEPSRQDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      LNI VHDHIIIG     S +   +I
Sbjct: 195 EITRQIAEAGKRLNIAVHDHIIIGTQGHSSLRAKGLI 231


>gi|253577906|ref|ZP_04855178.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850224|gb|EES78182.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 239

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/93 (37%), Positives = 49/93 (52%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D     + D++ +RGT     V  REI    L   A S+IL+HNHPSG+P PS  D+ +T
Sbjct: 141 DVKGHFLGDKILTRGTATGSLVTPREIFMEALRRHAVSLILIHNHPSGDPTPSPDDLQIT 200

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             I      L I + DHI+IG   + SF+   +
Sbjct: 201 ARIYQAGELLGIHLLDHIVIGDQRYCSFREEGL 233


>gi|329121132|ref|ZP_08249763.1| DNA repair protein RadC [Dialister micraerophilus DSM 19965]
 gi|327471294|gb|EGF16748.1| DNA repair protein RadC [Dialister micraerophilus DSM 19965]
          Length = 246

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 53/96 (55%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +L+  N L+     +RG +    V I+E ++  L   A +IILVHNHPSG P+PS  DI 
Sbjct: 151 YLNIKNKLLGYREITRGGLQETVVDIKEALKWALRFKAYAIILVHNHPSGVPDPSREDIR 210

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            T+  +     L+I+V DHIIIG   F S   +  +
Sbjct: 211 TTERFVKAGKILDIVVLDHIIIGDGNFKSLAEMGYV 246


>gi|254423586|ref|ZP_05037304.1| DNA repair protein RadC [Synechococcus sp. PCC 7335]
 gi|196191075|gb|EDX86039.1| DNA repair protein RadC [Synechococcus sp. PCC 7335]
          Length = 260

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/94 (35%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +I  +V S GT      + R+I +  ++  AT II+ HNHPSGN  PS  DI
Sbjct: 158 LLLDVKHRIIGSKVISVGTATETIAHPRDIFREVIKRGATRIIVAHNHPSGNLEPSSEDI 217

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ ++     L I + DH+I+G   + S +  
Sbjct: 218 VLTRQLLDGAKLLGIPLLDHLILGNGDWSSIRQN 251


>gi|224369167|ref|YP_002603331.1| RadC2 [Desulfobacterium autotrophicum HRM2]
 gi|223691884|gb|ACN15167.1| RadC2 [Desulfobacterium autotrophicum HRM2]
          Length = 187

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I   + S G++    V+ RE+++  +  +++++IL HNHPSG   PS  DI
Sbjct: 81  LMLNAKNKIIGLNIVSTGSLSSATVHPREVLKPAILANSSAMILCHNHPSGTLTPSPEDI 140

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG--KDAFVSFKGLRII 97
            +T+ II   + + I VH+H+II    D+F SF    +I
Sbjct: 141 AITKRIIQASDIMGITVHEHLIINMDDDSFYSFSENGLI 179


>gi|312890208|ref|ZP_07749749.1| DNA repair protein RadC [Mucilaginibacter paludis DSM 18603]
 gi|311297320|gb|EFQ74448.1| DNA repair protein RadC [Mucilaginibacter paludis DSM 18603]
          Length = 156

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD +N +I     S G         R I    L+ +A  IIL HNHPSG+  PS  D 
Sbjct: 60  LLLDTNNNVIGIFEVSSGGTSTTTADPRLIFAAALKANAKGIILAHNHPSGDWMPSHNDK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ ++     L I V DH+I+ ++ + SF    ++
Sbjct: 120 AMTRLLVEAGALLMIPVLDHVIVTREGYYSFANEGLL 156


>gi|298368845|ref|ZP_06980163.1| DNA repair protein RadC [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282848|gb|EFI24335.1| DNA repair protein RadC [Neisseria sp. oral taxon 014 str. F0314]
          Length = 225

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+I+ HNHP G+  PS+ADI
Sbjct: 128 LLLNRQNQLIAMRELSRGTVAENTVYIREIVKLALDEYADSLIIAHNHPGGSARPSEADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   L+ +++ + DH I+      S +    +
Sbjct: 188 GFTKRLAQALDLVDVSLLDHFIVTAKEVCSLRETGYM 224


>gi|312867735|ref|ZP_07727941.1| DNA repair protein RadC [Streptococcus parasanguinis F0405]
 gi|311096798|gb|EFQ55036.1| DNA repair protein RadC [Streptococcus parasanguinis F0405]
          Length = 227

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  ++   GT++      REI+   L+  ATSIIL HNHPSG   PS  D 
Sbjct: 129 LYLNTQNEIIHQQIIFIGTVNRSIAEPREILHYALKHMATSIILAHNHPSGAVFPSKNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T  ++     + + + DH+I+ ++ + S++  
Sbjct: 189 EVTHRVLEACEVMGLTLLDHLIVSEENYYSYREE 222


>gi|213963331|ref|ZP_03391587.1| DNA repair protein RadC [Capnocytophaga sputigena Capno]
 gi|213953999|gb|EEB65325.1| DNA repair protein RadC [Capnocytophaga sputigena Capno]
          Length = 221

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/90 (38%), Positives = 52/90 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I     S G I H  V IR + +  LE  A S+ILVHNHPSG+  PS  D+
Sbjct: 129 LYLNSANRVIHKCRLSSGGITHTTVDIRLLFKNALEQGAVSLILVHNHPSGSTTPSKEDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
            +T+ +    + L+I + DHII+ +  + S
Sbjct: 189 ELTERVRNAGDTLDIKLLDHIIVTEKEYYS 218


>gi|206975625|ref|ZP_03236537.1| RadC [Bacillus cereus H3081.97]
 gi|206746087|gb|EDZ57482.1| RadC [Bacillus cereus H3081.97]
          Length = 168

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N      V   G+++   V+ RE+++  +  +A SII+ HNHPS +P PS  D+
Sbjct: 72  LCLDIKNQPTTINVCHIGSLNSSIVHPREVLKPAIISNAASIIVAHNHPSNDPTPSSEDL 131

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +I     + I V DH+I+ +++FVS K    +
Sbjct: 132 EVTKRLIEAGKVVGIEVLDHLIVCEESFVSLKEKGYM 168


>gi|168334673|ref|ZP_02692813.1| DNA repair protein RadC [Epulopiscium sp. 'N.t. morphotype B']
          Length = 225

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LI     S GT++   V+ R++ +  +E+ A S+I+VHNHPSG+P PS  DI
Sbjct: 122 LYLDSKLGLIKKHCISIGTLNMTIVHARDVFRPAIEVCANSLIVVHNHPSGDPEPSKQDI 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++      + I + DH+I+G   F S + + I+
Sbjct: 182 TITRDLQFVGEVIKIPLLDHVIVGDGDFRSLRQMGIL 218


>gi|307611348|emb|CBX01009.1| DNA repair protein RadC [Legionella pneumophila 130b]
          Length = 227

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E    GTI+   VY R IV+R L+L+A ++IL HNHPSG  + S  D+
Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS-FKGLRII 97
            +T+ I   L+ ++  + DHI+IG +   S F   + +
Sbjct: 188 AITKRIRDALDLVDARLLDHIVIGDNEVYSIFAENKWV 225


>gi|302391343|ref|YP_003827163.1| DNA replication and repair protein RadC [Acetohalobium arabaticum
           DSM 5501]
 gi|302203420|gb|ADL12098.1| DNA replication and repair protein RadC [Acetohalobium arabaticum
           DSM 5501]
          Length = 229

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 56/96 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I+ E  S G++ +  V+ RE+ +  +  S+ ++IL HNHPSGNP PS  DI
Sbjct: 132 LLLNTKNEIISIEDISIGSLSNSIVHPREVFKPAIRRSSAAVILAHNHPSGNPEPSKEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++TQ I      L I V DH++IG   ++S K    
Sbjct: 192 DITQRIKKAGKILGIEVLDHLVIGNKDYISLKEKGY 227


>gi|330895709|gb|EGH27999.1| hypothetical protein PSYJA_02849 [Pseudomonas syringae pv.
          japonica str. M301072PT]
          Length = 111

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/87 (39%), Positives = 56/87 (64%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          LFLD  + ++  E+  RGTI+   V+ R++V+R +  +A S+IL HNHPSG   PS +DI
Sbjct: 8  LFLDNKHRVMTFEILFRGTINASYVHPRQVVKRAMAHNAASLILCHNHPSGITTPSRSDI 67

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDA 87
          ++T+ +   L  +++ V DH+I+G   
Sbjct: 68 DLTKRLKEALMLVDVHVLDHVIVGDGG 94


>gi|330684041|gb|EGG95798.1| DNA repair protein RadC [Staphylococcus epidermidis VCU121]
          Length = 227

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 52/96 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+I  +    GT++   ++ REI    ++ S  S+I+VHNHPSG+  PS+ DI
Sbjct: 128 LLLNSKNIVIKQKCIFVGTLNSSIIHPREIFNVAIKESCNSMIVVHNHPSGDVTPSEEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           N T  +      L I V DHIIIG + F S      
Sbjct: 188 NTTIRLRDCGMILGINVLDHIIIGDNQFTSLVECGY 223


>gi|42520150|ref|NP_966065.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of
          Drosophila melanogaster]
 gi|42409887|gb|AAS13999.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of
          Drosophila melanogaster]
          Length = 99

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
          ++ D+   L   E    GT+D VP YIRE+ ++ L   ATSII+ HNHP G   PSD D 
Sbjct: 4  IYFDQKCRLKG-EEVFTGTVDKVPFYIREVTRKALIRKATSIIISHNHPEGRLKPSDEDE 62

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+++      + I + DHIII    + SFK   ++
Sbjct: 63 AVTKDLAKACQTIGIRLLDHIIITSVGYFSFKEQGLL 99


>gi|314937357|ref|ZP_07844695.1| DNA repair protein RadC family protein [Enterococcus faecium
           TX0133a04]
 gi|314942737|ref|ZP_07849561.1| DNA repair protein RadC family protein [Enterococcus faecium
           TX0133C]
 gi|314952586|ref|ZP_07855581.1| DNA repair protein RadC family protein [Enterococcus faecium
           TX0133A]
 gi|314992398|ref|ZP_07857825.1| DNA repair protein RadC family protein [Enterococcus faecium
           TX0133B]
 gi|314997273|ref|ZP_07862247.1| DNA repair protein RadC family protein [Enterococcus faecium
           TX0133a01]
 gi|313588636|gb|EFR67481.1| DNA repair protein RadC family protein [Enterococcus faecium
           TX0133a01]
 gi|313593066|gb|EFR71911.1| DNA repair protein RadC family protein [Enterococcus faecium
           TX0133B]
 gi|313595310|gb|EFR74155.1| DNA repair protein RadC family protein [Enterococcus faecium
           TX0133A]
 gi|313598517|gb|EFR77362.1| DNA repair protein RadC family protein [Enterococcus faecium
           TX0133C]
 gi|313643261|gb|EFS07841.1| DNA repair protein RadC family protein [Enterococcus faecium
           TX0133a04]
          Length = 255

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 2/97 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA     +G I+      REI Q  L  ++  I + HNHPSG   PS+ D 
Sbjct: 157 MCLNTKNEVIAYSEVFKGGINQSVAIPREIFQLALLNNSAKIAVSHNHPSGYEFPSENDK 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG--KDAFVSFKGLR 95
           + T N+      + I + DHII+     ++ SF+   
Sbjct: 217 SFTTNLKNAGKTIGIELLDHIIVTSKNTSYYSFQENG 253


>gi|91202086|emb|CAJ75146.1| similar to DNA repair protein RadC [Candidatus Kuenenia
           stuttgartiensis]
          Length = 137

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 57/95 (60%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N++   E+ S GT+    +  RE+ +  +  +  +I+LVHNHP+G+P PS  D+++
Sbjct: 42  LNNKNVIQYIELVSLGTLTSAVLGPREVFRLAVHKAIANILLVHNHPAGDPEPSKEDVSV 101

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           TQ +I+    L I V DH+IIG   + SFK   II
Sbjct: 102 TQRLISAGQILGIQVLDHVIIGNPEYYSFKERGII 136


>gi|313889050|ref|ZP_07822708.1| DNA repair protein RadC family protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312844923|gb|EFR32326.1| DNA repair protein RadC family protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 148

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 57/95 (60%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD    +I   V S+GTI+  PV  RE+ Q+    +A SII+ HNHPSG+P PS  DI  
Sbjct: 54  LDVKKKVIGTFVISQGTINMTPVSPREVFQKAFLANAHSIIVAHNHPSGDPEPSKQDIAF 113

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T++++     ++I + D II+G +++ SF    +I
Sbjct: 114 TRDLMEAGKIMDIQICDSIILGHNSYYSFLEDGLI 148


>gi|301155839|emb|CBW15307.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 156

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD+ + LI  EV  +G++  + V IREI+++ L+L+A++II+ HNHP+GN  PSDAD 
Sbjct: 60  LFLDRIHRLIKSEVMFQGSVSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADK 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I + DH I+   A   F    ++
Sbjct: 120 YITKRLKEACELMEIKLLDHFIVSGSASFCFTDNHLM 156


>gi|149277410|ref|ZP_01883551.1| putative DNA repair protein [Pedobacter sp. BAL39]
 gi|149231643|gb|EDM37021.1| putative DNA repair protein [Pedobacter sp. BAL39]
          Length = 190

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N +I  +  S G +    +  + +    L+   T IIL HNHPSG   PS+AD+
Sbjct: 93  LLLNRSNRVIGIKEVSSGGMTGTVIDPKLVFSVALKSLCTGIILCHNHPSGRLKPSEADL 152

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKD-AFVSFKGLRII 97
            +T+ ++     L++ + DHII+ K   F SF    II
Sbjct: 153 MLTRRLVEVGKLLDLQLLDHIILTKHCGFYSFADEGII 190


>gi|254498591|ref|ZP_05111311.1| DNA repair protein RadC [Legionella drancourtii LLAP12]
 gi|254352182|gb|EET10997.1| DNA repair protein RadC [Legionella drancourtii LLAP12]
          Length = 227

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/90 (40%), Positives = 55/90 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E    GTI+   ++ R I++R L+L+A ++IL HNHPSG  + S  DI
Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATIHPRPIIERVLQLNAAALILAHNHPSGISDASHQDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
            +T+ I   L  ++  + DHI+IG +   S
Sbjct: 188 MVTERIRDALELVDARLLDHIVIGDNEVYS 217


>gi|254444140|ref|ZP_05057616.1| DNA repair protein RadC [Verrucomicrobiae bacterium DG1235]
 gi|198258448|gb|EDY82756.1| DNA repair protein RadC [Verrucomicrobiae bacterium DG1235]
          Length = 239

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 7/102 (6%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L++ N LI     + GT  +  V+ RE+ +  +   A+++I VHNHPSG+P PS ADI +
Sbjct: 138 LNRKNRLIKKVEITSGTASNSLVHPREVYRDAIRQGASAVICVHNHPSGDPAPSAADIKV 197

Query: 63  TQNIITTLNPLNIIVHDHIIIG-------KDAFVSFKGLRII 97
           T+ +  +   L I + DHI++G          + SF+   ++
Sbjct: 198 TRQLRESSKVLGIDLLDHIVVGSVEHDPRSRGYYSFQESGLL 239


>gi|29349103|ref|NP_812606.1| putative DNA repair protein [Bacteroides thetaiotaomicron VPI-5482]
 gi|253571267|ref|ZP_04848674.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|29341010|gb|AAO78800.1| putative DNA repair protein [Bacteroides thetaiotaomicron VPI-5482]
 gi|251839220|gb|EES67304.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 231

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   LI     S G ID     +R I++  L   AT I +VHNHPSGN  PS  D 
Sbjct: 135 LLLNQATRLIDKVRISTGGIDGTYTDVRTILREALLQRATQIAVVHNHPSGNIQPSQPDR 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++I    + +NI + DH+I+ +D F SF    ++
Sbjct: 195 TLTEHIRRAADTMNIRLIDHVIVCEDKFYSFADEGLL 231


>gi|58617393|ref|YP_196592.1| DNA repair protein radC-like protein [Ehrlichia ruminantium str.
           Gardel]
 gi|58417005|emb|CAI28118.1| DNA repair protein radC homolog [Ehrlichia ruminantium str. Gardel]
          Length = 230

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 63/97 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+    L+ADE+Q  GT++  P+YIRE++++ L L ATSII+ HNHPSG+  PS ADI
Sbjct: 134 LYLNTKFKLLADEIQDVGTVNQTPLYIREVIKKSLLLGATSIIIAHNHPSGDATPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +    N + I + DH+I+  +   SFK   ++
Sbjct: 194 EVTNQLAIACNNMGITLIDHVIVTSNTHYSFKSHDLL 230


>gi|77405495|ref|ZP_00782587.1| DNA repair protein RadC [Streptococcus agalactiae H36B]
 gi|77175892|gb|EAO78669.1| DNA repair protein RadC [Streptococcus agalactiae H36B]
          Length = 141

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 58/94 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +++D  N +I       GT+       REI+    +  ATS+I++HNHPSG+PNPS++D+
Sbjct: 44  IYMDTQNRIIEQRTIFIGTVRRSVAEPREILHYACKNMATSLIIIHNHPSGSPNPSESDL 103

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           + T+ I  + + L I+  DHII+GK+ + SF+  
Sbjct: 104 SFTKKIKRSCDHLGIVCLDHIIVGKNKYYSFREE 137


>gi|306831281|ref|ZP_07464441.1| DNA repair protein RadC [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426517|gb|EFM29629.1| DNA repair protein RadC [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 232

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I       G++       REI+    +  ATS+I+VHNHPSG+P PS+ D+
Sbjct: 135 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             TQ +  +   + II  DHI+IGK  + SF+  
Sbjct: 195 QFTQKMKRSCEDIGIICLDHIVIGKYQYYSFREE 228


>gi|224369042|ref|YP_002603206.1| RadC1 [Desulfobacterium autotrophicum HRM2]
 gi|223691759|gb|ACN15042.1| RadC1 [Desulfobacterium autotrophicum HRM2]
          Length = 187

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 2/99 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +I   + S G++    V+ RE+++  +  +++++IL HNHPSG   PS  DI
Sbjct: 81  LMLNAKNKIIGLNIVSTGSLSSATVHPREVLKPAILANSSAMILCHNHPSGTLTPSPEDI 140

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG--KDAFVSFKGLRII 97
            +T+ II   N + I VH+H+II    D+F SF    +I
Sbjct: 141 AITERIIKASNIMGITVHEHLIISMDDDSFYSFSEHGLI 179


>gi|306833394|ref|ZP_07466521.1| DNA repair protein RadC [Streptococcus bovis ATCC 700338]
 gi|304424164|gb|EFM27303.1| DNA repair protein RadC [Streptococcus bovis ATCC 700338]
          Length = 232

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I       G++       REI+    +  ATS+I+VHNHPSG+P PS+ D+
Sbjct: 135 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             TQ I  +   + II  DH++IGK  + SF+  
Sbjct: 195 RFTQKIKRSCEDIGIICLDHLVIGKYQYYSFREE 228


>gi|22537259|ref|NP_688110.1| DNA repair protein RadC [Streptococcus agalactiae 2603V/R]
 gi|76788041|ref|YP_329807.1| DNA repair protein RadC [Streptococcus agalactiae A909]
 gi|77413024|ref|ZP_00789226.1| DNA repair protein RadC [Streptococcus agalactiae 515]
 gi|39931963|sp|Q8DZK0|Y1101_STRA5 RecName: Full=UPF0758 protein SAG1101
 gi|123601762|sp|Q3K0Z6|Y1186_STRA1 RecName: Full=UPF0758 protein SAK_1186
 gi|22534127|gb|AAM99982.1|AE014242_11 DNA repair protein RadC [Streptococcus agalactiae 2603V/R]
 gi|76563098|gb|ABA45682.1| DNA repair protein RadC [Streptococcus agalactiae A909]
 gi|77160922|gb|EAO72031.1| DNA repair protein RadC [Streptococcus agalactiae 515]
 gi|319745114|gb|EFV97439.1| DNA repair protein RadC [Streptococcus agalactiae ATCC 13813]
          Length = 226

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 57/94 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +++D  N +I       GT+       REI+    +  ATS+I++HNHPSG+P PS++D+
Sbjct: 129 IYMDTQNRIIEQRTIFIGTVRRSVAEPREILHYACKNMATSLIIIHNHPSGSPKPSESDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           + T+ I  + + L I+  DHII+GK+ + SF+  
Sbjct: 189 SFTKKIKRSCDHLGIVCLDHIIVGKNKYYSFREE 222


>gi|15675098|ref|NP_269272.1| DNA repair protein RadC [Streptococcus pyogenes M1 GAS]
 gi|19746067|ref|NP_607203.1| DNA repair protein RadC [Streptococcus pyogenes MGAS8232]
 gi|56808362|ref|ZP_00366118.1| COG2003: DNA repair proteins [Streptococcus pyogenes M49 591]
 gi|71910653|ref|YP_282203.1| DNA repair protein RadC [Streptococcus pyogenes MGAS5005]
 gi|94988589|ref|YP_596690.1| DNA repair protein RadC [Streptococcus pyogenes MGAS9429]
 gi|94990465|ref|YP_598565.1| DNA repair protein RadC [Streptococcus pyogenes MGAS10270]
 gi|94992412|ref|YP_600511.1| DNA repair protein RadC [Streptococcus pyogenes MGAS2096]
 gi|94994387|ref|YP_602485.1| DNA repair protein RadC [Streptococcus pyogenes MGAS10750]
 gi|139473789|ref|YP_001128505.1| DNA repair protein RadC [Streptococcus pyogenes str. Manfredo]
 gi|209559401|ref|YP_002285873.1| DNA repair protein RadC [Streptococcus pyogenes NZ131]
 gi|306827376|ref|ZP_07460663.1| DNA repair protein RadC [Streptococcus pyogenes ATCC 10782]
 gi|54039004|sp|P65963|Y1079_STRP8 RecName: Full=UPF0758 protein spyM18_1079
 gi|54041785|sp|P65962|Y1118_STRP1 RecName: Full=UPF0758 protein SPy_1118/M5005_Spy0840
 gi|229485566|sp|Q1JBU1|Y915_STRPB RecName: Full=UPF0758 protein MGAS2096_Spy0915
 gi|229485567|sp|Q1JLS3|Y959_STRPC RecName: Full=UPF0758 protein MGAS9429_Spy0959
 gi|229485568|sp|Q1JGX3|Y956_STRPD RecName: Full=UPF0758 protein MGAS10270_Spy0956
 gi|229485569|sp|Q1J6P2|Y991_STRPF RecName: Full=UPF0758 protein MGAS10750_Spy0991
 gi|229485570|sp|A2REK0|Y948_STRPG RecName: Full=UPF0758 protein SpyM50948
 gi|238054491|sp|B5XLG6|Y870_STRPZ RecName: Full=UPF0758 protein Spy49_0870
 gi|13622255|gb|AAK33993.1| putative DNA repair protein [Streptococcus pyogenes M1 GAS]
 gi|19748237|gb|AAL97702.1| putative DNA repair protein [Streptococcus pyogenes MGAS8232]
 gi|71853435|gb|AAZ51458.1| DNA repair protein [Streptococcus pyogenes MGAS5005]
 gi|94542097|gb|ABF32146.1| DNA repair protein [Streptococcus pyogenes MGAS9429]
 gi|94543973|gb|ABF34021.1| DNA repair protein radC [Streptococcus pyogenes MGAS10270]
 gi|94545920|gb|ABF35967.1| DNA repair protein radC [Streptococcus pyogenes MGAS2096]
 gi|94547895|gb|ABF37941.1| DNA repair protein radC [Streptococcus pyogenes MGAS10750]
 gi|134272036|emb|CAM30275.1| DNA repair protein RadC [Streptococcus pyogenes str. Manfredo]
 gi|209540602|gb|ACI61178.1| RadC-like DNA repair protein [Streptococcus pyogenes NZ131]
 gi|304430523|gb|EFM33545.1| DNA repair protein RadC [Streptococcus pyogenes ATCC 10782]
          Length = 226

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 50/94 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +I ++    GT+       REI+    +  ATS+I++HNHPSGN  PS  D 
Sbjct: 129 LYLDNQNRIIEEKTIFIGTVRRSLAEPREILYYACKNMATSLIVIHNHPSGNIEPSSNDY 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ I  +   L II  DHII+    + SF+  
Sbjct: 189 CFTEKIKRSCEDLGIICLDHIIVSYKDYYSFREK 222


>gi|300778380|ref|ZP_07088238.1| DNA repair protein RadC [Chryseobacterium gleum ATCC 35910]
 gi|300503890|gb|EFK35030.1| DNA repair protein RadC [Chryseobacterium gleum ATCC 35910]
          Length = 225

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+ +N +I     ++G I    V +R + +  L+  +T II+ HNHPSG+  PS  DI
Sbjct: 129 IFLNNNNKVIHISQLTQGGISQSIVDVRTLYKGALDHFSTGIIIAHNHPSGSLKPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+TQ I    N L+I + DHII+ ++++ SF    ++
Sbjct: 189 NITQKIKEAGNTLSIQLLDHIIVTQESYFSFSDSGLL 225


>gi|54295324|ref|YP_127739.1| DNA repair protein RadC [Legionella pneumophila str. Lens]
 gi|81368019|sp|Q5WTW4|Y2409_LEGPL RecName: Full=UPF0758 protein lpl2409
 gi|53755156|emb|CAH16649.1| DNA repair protein RadC [Legionella pneumophila str. Lens]
          Length = 227

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E    GTI+   VY R IV+R L+L+A ++IL HNHPSG  + S  D+
Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS-FKGLRI 96
            +T+ I   L+ ++  + DHI+IG +   S F   + 
Sbjct: 188 AITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKW 224


>gi|299822789|ref|ZP_07054675.1| DNA repair protein RadC [Listeria grayi DSM 20601]
 gi|299816318|gb|EFI83556.1| DNA repair protein RadC [Listeria grayi DSM 20601]
          Length = 226

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N ++  +    G+++   V+ RE+    +  SA  I+  HNHPSG+P PS  DI
Sbjct: 130 VLLNTRNQIVHRQTIFIGSLNASIVHPREVYGLAVRKSAAQIMCFHNHPSGDPTPSPEDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+N+    + + I + DHIIIGK +F S K    
Sbjct: 190 QVTKNLAKAGDIIGIPLIDHIIIGKGSFTSLKEQGY 225


>gi|148548137|ref|YP_001268239.1| DNA repair protein RadC [Pseudomonas putida F1]
 gi|148512195|gb|ABQ79055.1| DNA repair protein RadC [Pseudomonas putida F1]
          Length = 164

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + +++ ++   G+ID   VY R++V + LE +A ++I  HNHPSG   PS AD 
Sbjct: 68  LCLDSRHRVLSFDILFTGSIDGASVYPRQVVIKALEHNAAAVIFSHNHPSGCSEPSGADR 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  + + V DHII+G+   +S      I
Sbjct: 128 VLTNRLTEALALVEVCVLDHIIVGEGTPLSLAEYGWI 164


>gi|253571565|ref|ZP_04848971.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251838773|gb|EES66858.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 150

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N  +   + S+G +    + ++ I+Q  L++ A+ IIL HNHPSGN  PS+ D 
Sbjct: 54  MFLNRANKALGVSLISKGGMAETVMDVKIILQTALKVHASGIILSHNHPSGNLRPSEPDK 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L++ + DHII+ ++++ SF    +I
Sbjct: 114 QITSKIKEACKVLDLHLLDHIILTEESYYSFADEGLI 150


>gi|323351534|ref|ZP_08087188.1| DNA repair protein RadC [Streptococcus sanguinis VMC66]
 gi|322122020|gb|EFX93746.1| DNA repair protein RadC [Streptococcus sanguinis VMC66]
          Length = 227

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N ++  +    GT+       REI+   L+  ATSIILVHNHPSG+  PS  D 
Sbjct: 130 IYLNSQNQILHQQTIFMGTVSRSIAEPREILHYALKHLATSIILVHNHPSGSVVPSRNDD 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +TQ++      + +++ DH+I+ K  + S++  
Sbjct: 190 EVTQHMKEACEMMGLVLLDHLIVSKCNYYSYREE 223


>gi|320355157|ref|YP_004196496.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032]
 gi|320123659|gb|ADW19205.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032]
          Length = 159

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A     RG+I+   V+ RE+V+  L L+A S+I+ HNHPSG   PS  D+
Sbjct: 62  LFLDSRHQVLAWREMFRGSINRNSVHPREVVKEALTLNAASVIIAHNHPSGGIQPSKEDL 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +   L  +++ V DH+I+G +  +S     
Sbjct: 122 ELTRTLTEILKVIDVRVLDHLIVG-EEVLSLSETG 155


>gi|312129966|ref|YP_003997306.1| DNA replication and repair protein radc [Leadbetterella byssophila
           DSM 17132]
 gi|311906512|gb|ADQ16953.1| DNA replication and repair protein RadC [Leadbetterella byssophila
           DSM 17132]
          Length = 225

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   ++     S+G ++   V IR + +  LE  +TSI+L HNHPSG  +PS  DI
Sbjct: 129 LCLNRQLQILQTIQISKGGLNATMVDIRLLFKAALENFSTSILLCHNHPSGQLHPSKQDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I +    L+I V DH+I   + + SF    ++
Sbjct: 189 QLTQKIKSAAVYLDIEVADHLIFTDNGYYSFVENGLL 225


>gi|281491501|ref|YP_003353481.1| DNA repair protein RadC [Lactococcus lactis subsp. lactis KF147]
 gi|281375219|gb|ADA64732.1| DNA repair protein RadC [Lactococcus lactis subsp. lactis KF147]
          Length = 226

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 46/93 (49%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD  N +I  +    G ++      REI+   ++  +  +++ HNHPSGN  PS AD  
Sbjct: 130 YLDGQNRIIGKKTIFIGAVNQATASPREILYHAIKNLSVGLLVAHNHPSGNLRPSQADKI 189

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            T  I  +   + I   DHII+G   + SF+  
Sbjct: 190 FTDKIKKSCEDVGINFIDHIIVGAGNYFSFREE 222


>gi|52842697|ref|YP_096496.1| DNA repair protein RadC [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|81376830|sp|Q5ZSM8|Y2489_LEGPH RecName: Full=UPF0758 protein lpg2489
 gi|52629808|gb|AAU28549.1| DNA repair protein RadC [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 227

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E    GTI+   VY R IV+R L+L+A ++IL HNHPSG  + S  D+
Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS-FKGLRII 97
            +T+ I   L+ ++  + DHI+IG +   S F   + +
Sbjct: 188 AITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKWV 225


>gi|325971670|ref|YP_004247861.1| DNA repair protein RadC [Spirochaeta sp. Buddy]
 gi|324026908|gb|ADY13667.1| DNA repair protein RadC [Spirochaeta sp. Buddy]
          Length = 156

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 52/94 (55%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  + +I   V S+G ++   V+ RE+ +  +  ++T+I++ HNHPSGN  PS  D ++
Sbjct: 62  LNGAHQIIDAHVISKGLVNRTLVHPREVFRPAILDNSTAIVIAHNHPSGNLEPSAEDKDV 121

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           T  I    + + I V DH+I  ++ + S     +
Sbjct: 122 TFRIRQAGDLIGIRVLDHLIFSQNGYFSMLESGM 155


>gi|153808951|ref|ZP_01961619.1| hypothetical protein BACCAC_03252 [Bacteroides caccae ATCC 43185]
 gi|149128284|gb|EDM19503.1| hypothetical protein BACCAC_03252 [Bacteroides caccae ATCC 43185]
          Length = 231

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   LI     S G ID     +R I++  L   AT I +VHNHPSGN  PS  D 
Sbjct: 135 LLLNQATKLIDKIRISSGGIDGTYADVRSILREALMQRATQIAVVHNHPSGNIQPSQPDR 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++I    + +NI + DH+I+ +D F SF    ++
Sbjct: 195 TLTEHIRKAADTMNIRLIDHVIVCEDGFYSFADEGLL 231


>gi|270290994|ref|ZP_06197217.1| DNA repair protein [Pediococcus acidilactici 7_4]
 gi|270280390|gb|EFA26225.1| DNA repair protein [Pediococcus acidilactici 7_4]
          Length = 225

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +  + V  +G ++   V+ REI+   L  S+   ILVHNHPSGN  PS  D+
Sbjct: 126 LCLDTKNQIKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVEPSMNDV 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +    + + I + DH+I+G   + S    R++
Sbjct: 186 AFTKKMKKIGDLMGIRLIDHLIVGDQTYWSAAENRVL 222


>gi|315222705|ref|ZP_07864594.1| DNA repair protein RadC [Streptococcus anginosus F0211]
 gi|319938952|ref|ZP_08013316.1| hypothetical protein HMPREF9459_00303 [Streptococcus anginosus
           1_2_62CV]
 gi|315188391|gb|EFU22117.1| DNA repair protein RadC [Streptococcus anginosus F0211]
 gi|319812002|gb|EFW08268.1| hypothetical protein HMPREF9459_00303 [Streptococcus anginosus
           1_2_62CV]
          Length = 226

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G++       REI+   ++  ATSIILVHNHPSG   PS  D 
Sbjct: 129 LYLNTQNKIIHQQTIFIGSVSRSIAEPREILHYAVKHMATSIILVHNHPSGAVLPSKNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+++      +  I+ DH+I+ +  + S++  
Sbjct: 189 EVTKHVKEACELMGFILLDHLIVAEKDYYSYREE 222


>gi|258590906|emb|CBE67201.1| DNA repair protein radC homolog [NC10 bacterium 'Dutch sediment']
          Length = 236

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 57/96 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           F++  N + A E   RGT+D   VY+R++++R L   A+  +L HNHPSG+P PS  D  
Sbjct: 141 FVNSKNAVTATECLQRGTVDQSVVYVRKVIERALVHKASGFLLAHNHPSGDPTPSPQDRE 200

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +TQ + T    + +   DH++IG  A  SFK + ++
Sbjct: 201 ITQALKTAAATVGVRFLDHLVIGDGAPFSFKAVGLL 236


>gi|304385266|ref|ZP_07367611.1| DNA repair protein RadC [Pediococcus acidilactici DSM 20284]
 gi|304328473|gb|EFL95694.1| DNA repair protein RadC [Pediococcus acidilactici DSM 20284]
          Length = 222

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +  + V  +G ++   V+ REI+   L  S+   ILVHNHPSGN  PS  D+
Sbjct: 123 LCLDTKNQIKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVEPSMNDV 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +    + + I + DH+I+G   + S    R++
Sbjct: 183 AFTKKMKKIGDLMGIRLIDHLIVGDQTYWSAAENRVL 219


>gi|150025420|ref|YP_001296246.1| DNA repair protein RadC [Flavobacterium psychrophilum JIP02/86]
 gi|149771961|emb|CAL43435.1| DNA repair protein RadC [Flavobacterium psychrophilum JIP02/86]
          Length = 231

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 56/96 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N +I     S+G I    V +R + +  LE +ATSIIL HNHPSG    SDAD 
Sbjct: 135 LFLNNANKVIYKSQISKGGITGTVVDVRVVFKMALEQNATSIILTHNHPSGKLEASDADK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           N+T+ +      L+I + DHIII +  ++SF+   I
Sbjct: 195 NITKQLKLAGQQLSIPILDHIIITEKGYLSFQDENI 230


>gi|188994910|ref|YP_001929162.1| putative DNA repair protein [Porphyromonas gingivalis ATCC 33277]
 gi|188594590|dbj|BAG33565.1| putative DNA repair protein [Porphyromonas gingivalis ATCC 33277]
          Length = 230

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   +I+ E  SRG +      +R I+ + +   A++IIL HNHPSG   PS+ DI
Sbjct: 133 LLLNQSGKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGTVRPSEQDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRII 97
            +TQ +      L   ++DH+IIG D  + SF    ++
Sbjct: 193 QLTQRVQKAATLLGFRLNDHLIIGDDGVYFSFADEGLL 230


>gi|320546653|ref|ZP_08040965.1| DNA repair protein RadC [Streptococcus equinus ATCC 9812]
 gi|320448708|gb|EFW89439.1| DNA repair protein RadC [Streptococcus equinus ATCC 9812]
          Length = 226

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I       G++       REI+    +  ATS+I+VHNHPSG+P PS+ D+
Sbjct: 129 IYLDTQNRIIEQRTIFIGSVRRSIAEPREILYYACKNMATSVIIVHNHPSGSPEPSENDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ I  +   + +I  DHII+GK  + SF+  
Sbjct: 189 RFTEKIKRSCEDIGLICLDHIIVGKYQYYSFREE 222


>gi|313887968|ref|ZP_07821646.1| DNA repair protein RadC [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845923|gb|EFR33306.1| DNA repair protein RadC [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 239

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 57/95 (60%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+    +      S+GTI+   V+ RE+ +  +  +A SIIL+HNHP+G+P+PS  DI +
Sbjct: 145 LNTKKEINFIREISKGTINMTIVHSREVFRAAISDNAHSIILLHNHPTGDPSPSKEDIKL 204

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+N++     + I + DHIIIG + + SF    ++
Sbjct: 205 TKNLLEASKIIGIDILDHIIIGDNKYFSFLEEGLL 239


>gi|304407257|ref|ZP_07388910.1| DNA repair protein RadC [Paenibacillus curdlanolyticus YK9]
 gi|304343698|gb|EFM09539.1| DNA repair protein RadC [Paenibacillus curdlanolyticus YK9]
          Length = 165

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N   A    S GT++   V+ RE  +  +  +A SII  HNHPSG P+PS  DI
Sbjct: 68  LCLNTKNEPTALHTVSIGTLNASLVHPRETFKLAILANAASIIACHNHPSGQPDPSSEDI 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKD-AFVSFKGLRII 97
            +T+ +  +   L I + DH+++G     VS K   ++
Sbjct: 128 AITERLRDSGTLLGIELLDHLVLGDGITLVSMKERGLM 165


>gi|302346939|ref|YP_003815237.1| DNA repair protein RadC domain protein [Prevotella melaninogenica
           ATCC 25845]
 gi|302151141|gb|ADK97402.1| DNA repair protein RadC domain protein [Prevotella melaninogenica
           ATCC 25845]
          Length = 149

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ N +IA    S G +    V +R I+Q  L  +AT II  HNHP+GN  PS  D 
Sbjct: 52  LYLNQANEVIAYNTISEGGLTETAVDVRIILQGALLTNATQIIFAHNHPTGNLKPSPQDD 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I   DHII+  D++ S++    I
Sbjct: 112 MLTRELQKACQIMRIRFTDHIIMSVDSYYSYREEGRI 148


>gi|296876566|ref|ZP_06900617.1| DNA repair protein RadC [Streptococcus parasanguinis ATCC 15912]
 gi|296432559|gb|EFH18355.1| DNA repair protein RadC [Streptococcus parasanguinis ATCC 15912]
          Length = 227

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  NI+I  +    GT++      REI+   L+  ATSIIL HNHPSG   PS  D 
Sbjct: 129 LYLNTQNIIIHQQTIFIGTVNRSIAEPREILHYALKHMATSIILAHNHPSGAVFPSKNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T  ++     + + + DH+I+ ++ + S++  
Sbjct: 189 EVTHRVLEACEVMGLTLLDHLIVSEENYYSYREE 222


>gi|54298489|ref|YP_124858.1| DNA repair protein RadC [Legionella pneumophila str. Paris]
 gi|81369883|sp|Q5X240|Y2553_LEGPA RecName: Full=UPF0758 protein lpp2553
 gi|53752274|emb|CAH13706.1| DNA repair protein RadC [Legionella pneumophila str. Paris]
          Length = 227

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E    GTI+   VY R IV+R L+L+A ++IL HNHPSG  + S  D+
Sbjct: 128 LFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS-FKGLRII 97
            +T+ I   L+ ++  + DHI+IG +   S F   + +
Sbjct: 188 AITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKWV 225


>gi|50914184|ref|YP_060156.1| DNA repair protein RadC [Streptococcus pyogenes MGAS10394]
 gi|73913742|sp|Q5XC90|Y838_STRP6 RecName: Full=UPF0758 protein M6_Spy0838
 gi|50903258|gb|AAT86973.1| DNA repair protein radC [Streptococcus pyogenes MGAS10394]
          Length = 226

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 50/94 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +I ++    GT+       REI+    +  ATS+I++HNHPSGN  PS  D 
Sbjct: 129 LYLDNQNRIIEEKTIFIGTVRRSLAEPREILYYACKNMATSLIVIHNHPSGNIEPSSNDY 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ I  +   L II  DHII+    + SF+  
Sbjct: 189 CFTEKIKRSCEDLGIICLDHIIVSYKDYYSFREK 222


>gi|307354756|ref|YP_003895807.1| DNA repair protein RadC [Methanoplanus petrolearius DSM 11571]
 gi|307157989|gb|ADN37369.1| DNA repair protein RadC [Methanoplanus petrolearius DSM 11571]
          Length = 219

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 54/95 (56%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+    LI   + + G ++H PV+ RE+    +   A S++ VHNHPSG+P PS  D+++
Sbjct: 125 LNGAGELIEQRIVTVGLLNHSPVHPREVFADAITDRAASVLFVHNHPSGSPEPSVQDVDI 184

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +      L I V DHII  K  +VSFK   ++
Sbjct: 185 TKRLYEAAEILGIGVLDHIITAKRGYVSFKERGLL 219


>gi|213019779|ref|ZP_03335582.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212994609|gb|EEB55254.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 221

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++ D+   L   E    GT+D VP YIRE+ ++ L   ATSII+ HNHP G   PSD D 
Sbjct: 126 IYFDQKCHLKG-EEVFTGTVDKVPFYIREVTRKALIRKATSIIISHNHPEGRLKPSDEDE 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++      + I + DHIII    + SFK   ++
Sbjct: 185 AVTKDLAKACQTIGIRLLDHIIITSVGYFSFKEQGLL 221


>gi|34540659|ref|NP_905138.1| DNA repair protein RadC [Porphyromonas gingivalis W83]
 gi|81417483|sp|Q7MVX9|Y894_PORGI RecName: Full=UPF0758 protein PG_0894
 gi|34396973|gb|AAQ66037.1| DNA repair protein RadC [Porphyromonas gingivalis W83]
          Length = 227

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   +I+ E  SRG +      +R I+ + +   A++IIL HNHPSG   PS+ DI
Sbjct: 130 LLLNQSGKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGTVRPSEQDI 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRII 97
            +TQ +      L   ++DH+IIG D  + SF    ++
Sbjct: 190 QLTQRVQKAATLLGFRLNDHLIIGDDGAYFSFADEGLL 227


>gi|241759982|ref|ZP_04758080.1| DNA repair protein RadC [Neisseria flavescens SK114]
 gi|241319436|gb|EER55866.1| DNA repair protein RadC [Neisseria flavescens SK114]
          Length = 224

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LIA    SRGT+    VYIREIV+  L+  A S+IL HNHP  +  PS++D+
Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGSSARPSESDV 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   L+ ++I + DH I+      S +    +
Sbjct: 188 QFTERLKQALSLVDITLLDHFIVTAKETCSLREQGYM 224


>gi|320527463|ref|ZP_08028644.1| putative DNA repair protein RadC [Solobacterium moorei F0204]
 gi|320132176|gb|EFW24725.1| putative DNA repair protein RadC [Solobacterium moorei F0204]
          Length = 239

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 55/96 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  + +I+ +    GTI+   VY REI +  L + +T I+L HNHPSG   PS  D+
Sbjct: 128 VYLNTAHRIISAKTLFVGTINASAVYPREIFKEALLIGSTDILLAHNHPSGVLTPSTQDL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T  ++     + + V DH+I+ + +F+SF    +
Sbjct: 188 VVTGKLMECGKLMGVRVLDHLIVSQTSFLSFAREEL 223


>gi|190570883|ref|YP_001975241.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190571715|ref|YP_001976073.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019311|ref|ZP_03335118.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|213019396|ref|ZP_03335202.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357155|emb|CAQ54567.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190357987|emb|CAQ55450.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212994818|gb|EEB55460.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995420|gb|EEB56061.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 222

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LDK N LI DEV   GTID V +  R++V++ L + A SIIL HNHP G+  PS+ D 
Sbjct: 127 IYLDKQNRLIRDEVYF-GTIDEVHLSERKVVKKALSMEAASIILSHNHPGGSLEPSEDDK 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ +++    + I + DHII+    + SFK   ++
Sbjct: 186 VMTRELVSACQGVGIELEDHIIMTDKGYCSFKERELL 222


>gi|288801042|ref|ZP_06406498.1| DNA repair protein RadC [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331976|gb|EFC70458.1| DNA repair protein RadC [Prevotella sp. oral taxon 299 str. F0039]
          Length = 229

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++   LI     S+G I    V +R +V+  L  +AT ++  HNHPS N  PS AD 
Sbjct: 133 LYLNQGYKLIKAVQLSKGGITETAVDVRLVVKEALLCNATVVVFCHNHPSNNIQPSRADD 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    + L +   DHII+G   F S++    +
Sbjct: 193 QLTRQLKEGCDFLRLFFLDHIIVGDGKFFSYREEGRL 229


>gi|321272297|gb|ADW80182.1| putative DNA repair protein RadC [Wolbachia endosymbiont wVitA of
           Nasonia vitripennis phage WOVitA1]
 gi|321272349|gb|ADW80230.1| putative DNA repair protein RadC [Wolbachia endosymbiont wVitB of
           Nasonia vitripennis phage WOVitB]
          Length = 221

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++ D+   L   E    GT+D VP YIRE+ ++ L   ATSII+ HNHP G   PSD D 
Sbjct: 126 IYFDQKCRLKG-EEVFTGTVDKVPFYIREVTRKALIRKATSIIISHNHPEGRLKPSDEDE 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++      + I + DHIII    + SFK   ++
Sbjct: 185 AVTKDLAKACQTIGIRLMDHIIITSVGYFSFKEQGLL 221


>gi|15672989|ref|NP_267163.1| DNA repair protein RadC [Lactococcus lactis subsp. lactis Il1403]
 gi|13878681|sp|Q9CGT5|Y1007_LACLA RecName: Full=UPF0758 protein LL1007
 gi|12723955|gb|AAK05105.1|AE006335_1 DNA repair protein RadC [Lactococcus lactis subsp. lactis Il1403]
 gi|326406552|gb|ADZ63623.1| DNA repair protein RadC [Lactococcus lactis subsp. lactis CV56]
          Length = 226

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 46/93 (49%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD  N +I  +    G ++      REI+   ++  +  +++ HNHPSGN  PS AD  
Sbjct: 130 YLDGQNRIIEKKTIFIGAVNQATASPREILYHAIKNLSVGLLVAHNHPSGNLKPSQADKI 189

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            T  I  +   + I   DHII+G   + SF+  
Sbjct: 190 FTTKIKKSCEDVGINFIDHIIVGAGNYFSFREE 222


>gi|150005007|ref|YP_001299751.1| putative DNA repair protein [Bacteroides vulgatus ATCC 8482]
 gi|294776369|ref|ZP_06741848.1| DNA repair protein [Bacteroides vulgatus PC510]
 gi|149933431|gb|ABR40129.1| putative DNA repair protein [Bacteroides vulgatus ATCC 8482]
 gi|294449785|gb|EFG18306.1| DNA repair protein [Bacteroides vulgatus PC510]
          Length = 150

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N  +   + S+G +    + ++ I+Q  L++ A+ IIL HNHPSGN  PS+ D 
Sbjct: 54  MFLNRANKALGVSLISKGGMAETVMDVKIILQTALKVHASGIILSHNHPSGNLRPSEPDK 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L++ + DHII+ ++++ SF    +I
Sbjct: 114 QITSKIKEACKVLDLHLLDHIILTEESYYSFADEGLI 150


>gi|261378701|ref|ZP_05983274.1| DNA repair protein RadC [Neisseria cinerea ATCC 14685]
 gi|269144853|gb|EEZ71271.1| DNA repair protein RadC [Neisseria cinerea ATCC 14685]
          Length = 225

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N LI+    SRGT+    +YIREIV+  L+  A S+I+ HNHP G+  PS  DI
Sbjct: 128 LLLNRQNQLISVRELSRGTVAENTLYIREIVKLALDEYADSLIIAHNHPGGSAEPSHEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  +   ++ +++ + DH I+   +  SF+ L ++
Sbjct: 188 AFTGRLAQAMSLVDVSLLDHFIVTSRSVCSFRQLGLM 224


>gi|58697136|ref|ZP_00372568.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|225630223|ref|YP_002727014.1| DNA repair protein RadC [Wolbachia sp. wRi]
 gi|58536565|gb|EAL59914.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|225592204|gb|ACN95223.1| DNA repair protein RadC [Wolbachia sp. wRi]
          Length = 224

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 68/97 (70%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++++K   LIA+++Q+ GT+D  P+Y+REI++R L + +TSI++ HNHPS +  PS++DI
Sbjct: 128 IYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPSNSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DHIII   ++ SFK  R++
Sbjct: 188 SLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 224


>gi|58698852|ref|ZP_00373725.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534631|gb|EAL58757.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 225

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 68/97 (70%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++++K   LIA+++Q+ GT+D  P+Y+REI++R L + +TSI++ HNHPS +  PS++DI
Sbjct: 129 IYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPSNSDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DHIII   ++ SFK  R++
Sbjct: 189 SLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 225


>gi|47093527|ref|ZP_00231288.1| DNA repair protein C [Listeria monocytogenes str. 4b H7858]
 gi|47018087|gb|EAL08859.1| DNA repair protein RadC [Listeria monocytogenes str. 4b H7858]
 gi|328468072|gb|EGF39078.1| putative DNA repair protein RadC [Listeria monocytogenes 1816]
          Length = 147

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N ++A      G+++   V+ RE+ +  +  +  S+IL H HPSG+  PS  DI
Sbjct: 50  MCLNTKNNVVAVHRCHVGSLNSSIVHPREVFKSAILNNVASVILAHQHPSGDIKPSMEDI 109

Query: 61  NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97
           N+T+ ++     L I V DH+I+   ++F S K    I
Sbjct: 110 NVTKRLVEAGKLLGIEVLDHLIVNSDNSFTSLKERGYI 147


>gi|317473887|ref|ZP_07933167.1| DNA repair protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316909964|gb|EFV31638.1| DNA repair protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 153

 Score =  114 bits (287), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ + ++   + S G I    V +R I+Q  L  ++ +IIL HNHPSGN  PS  D+
Sbjct: 57  LFLNQASQVLGYTLISEGGITDTTVDVRVILQAALLTNSVAIILAHNHPSGNLKPSRQDM 116

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I V DH+I+    + SF     +
Sbjct: 117 EITKQVKEAARLMRITVTDHLILTDTGYYSFADEGQL 153


>gi|119510185|ref|ZP_01629323.1| DNA repair protein RadC [Nodularia spumigena CCY9414]
 gi|119465135|gb|EAW46034.1| DNA repair protein RadC [Nodularia spumigena CCY9414]
          Length = 243

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+  +V + GT        R+I +  +   AT  I+ HNHPSG+  PS  DI
Sbjct: 139 LLLDVKNRLLGTQVITIGTATETLASPRDIFREIIRQGATRAIIAHNHPSGSVEPSPEDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L I + DH+I+G     S +   I+
Sbjct: 199 ELTRQLLAGAQLLGIPLLDHLILGNGNHQSLRENTIL 235


>gi|148360058|ref|YP_001251265.1| DNA repair protein RadC [Legionella pneumophila str. Corby]
 gi|296108121|ref|YP_003619822.1| DNA repair protein RadC [Legionella pneumophila 2300/99 Alcoy]
 gi|229485555|sp|A5IEW9|Y1989_LEGPC RecName: Full=UPF0758 protein LPC_1989
 gi|148281831|gb|ABQ55919.1| DNA repair protein RadC [Legionella pneumophila str. Corby]
 gi|295650023|gb|ADG25870.1| DNA repair protein RadC [Legionella pneumophila 2300/99 Alcoy]
          Length = 227

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +IA E    GTI+   VY R IV+R L+L+A ++IL HNHPSG  + S  D 
Sbjct: 128 LFLDSQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDF 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS-FKGLRII 97
            +T+ I   L+ ++  + DHI+IG +   S F   + +
Sbjct: 188 AITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKWV 225


>gi|15900956|ref|NP_345560.1| DNA repair protein RadC [Streptococcus pneumoniae TIGR4]
 gi|111657603|ref|ZP_01408339.1| hypothetical protein SpneT_02001213 [Streptococcus pneumoniae
           TIGR4]
 gi|148985060|ref|ZP_01818303.1| DNA repair protein RadC [Streptococcus pneumoniae SP3-BS71]
 gi|148989131|ref|ZP_01820521.1| DNA repair protein RadC [Streptococcus pneumoniae SP6-BS73]
 gi|148994162|ref|ZP_01823477.1| DNA repair protein RadC [Streptococcus pneumoniae SP9-BS68]
 gi|148998354|ref|ZP_01825796.1| DNA repair protein RadC [Streptococcus pneumoniae SP11-BS70]
 gi|149003796|ref|ZP_01828628.1| DNA repair protein RadC [Streptococcus pneumoniae SP14-BS69]
 gi|149012918|ref|ZP_01833831.1| DNA repair protein RadC [Streptococcus pneumoniae SP19-BS75]
 gi|149024890|ref|ZP_01836291.1| DNA repair protein RadC [Streptococcus pneumoniae SP23-BS72]
 gi|168483163|ref|ZP_02708115.1| DNA repair protein RadC [Streptococcus pneumoniae CDC1873-00]
 gi|168486495|ref|ZP_02711003.1| DNA repair protein RadC [Streptococcus pneumoniae CDC1087-00]
 gi|168488931|ref|ZP_02713130.1| DNA repair protein RadC [Streptococcus pneumoniae SP195]
 gi|168576187|ref|ZP_02722081.1| DNA repair protein RadC [Streptococcus pneumoniae MLV-016]
 gi|169834408|ref|YP_001694513.1| DNA repair protein RadC [Streptococcus pneumoniae Hungary19A-6]
 gi|194397499|ref|YP_002037719.1| DNA repair protein RadC [Streptococcus pneumoniae G54]
 gi|221231830|ref|YP_002510982.1| DNA repair protein RadC [Streptococcus pneumoniae ATCC 700669]
 gi|225856732|ref|YP_002738243.1| DNA repair protein RadC [Streptococcus pneumoniae P1031]
 gi|225858901|ref|YP_002740411.1| DNA repair protein RadC [Streptococcus pneumoniae 70585]
 gi|225861054|ref|YP_002742563.1| DNA repair protein RadC [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650761|ref|ZP_04525013.1| DNA repair protein RadC [Streptococcus pneumoniae CCRI 1974]
 gi|237822348|ref|ZP_04598193.1| DNA repair protein RadC [Streptococcus pneumoniae CCRI 1974M2]
 gi|298230847|ref|ZP_06964528.1| DNA repair protein RadC [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298255794|ref|ZP_06979380.1| DNA repair protein RadC [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502896|ref|YP_003724836.1| DNA repair protein RadC [Streptococcus pneumoniae TCH8431/19A]
 gi|303254201|ref|ZP_07340313.1| DNA repair protein RadC [Streptococcus pneumoniae BS455]
 gi|303259751|ref|ZP_07345726.1| DNA repair protein RadC [Streptococcus pneumoniae SP-BS293]
 gi|303262926|ref|ZP_07348861.1| DNA repair protein RadC [Streptococcus pneumoniae SP14-BS292]
 gi|303264889|ref|ZP_07350805.1| DNA repair protein RadC [Streptococcus pneumoniae BS397]
 gi|303266869|ref|ZP_07352747.1| DNA repair protein RadC [Streptococcus pneumoniae BS457]
 gi|303268906|ref|ZP_07354691.1| DNA repair protein RadC [Streptococcus pneumoniae BS458]
 gi|307067729|ref|YP_003876695.1| DNA repair protein [Streptococcus pneumoniae AP200]
 gi|25009039|sp|Q97QW0|Y1088_STRPN RecName: Full=UPF0758 protein SP_1088
 gi|238688293|sp|B1IBM8|Y1181_STRPI RecName: Full=UPF0758 protein SPH_1181
 gi|238690819|sp|B5E4K3|Y1010_STRP4 RecName: Full=UPF0758 protein SPG_1010
 gi|254789661|sp|C1C785|Y1163_STRP7 RecName: Full=UPF0758 protein SP70585_1163
 gi|254789662|sp|B8ZPT5|Y1009_STRPJ RecName: Full=UPF0758 protein SPN23F10090
 gi|254789665|sp|C1CKF5|Y1095_STRZP RecName: Full=UPF0758 protein SPP_1095
 gi|254789666|sp|C1CRJ1|Y1135_STRZT RecName: Full=UPF0758 protein SPT_1135
 gi|14972563|gb|AAK75200.1| DNA repair protein RadC [Streptococcus pneumoniae TIGR4]
 gi|147755751|gb|EDK62796.1| DNA repair protein RadC [Streptococcus pneumoniae SP11-BS70]
 gi|147758242|gb|EDK65244.1| DNA repair protein RadC [Streptococcus pneumoniae SP14-BS69]
 gi|147763207|gb|EDK70147.1| DNA repair protein RadC [Streptococcus pneumoniae SP19-BS75]
 gi|147922758|gb|EDK73875.1| DNA repair protein RadC [Streptococcus pneumoniae SP3-BS71]
 gi|147925354|gb|EDK76432.1| DNA repair protein RadC [Streptococcus pneumoniae SP6-BS73]
 gi|147927405|gb|EDK78435.1| DNA repair protein RadC [Streptococcus pneumoniae SP9-BS68]
 gi|147929513|gb|EDK80507.1| DNA repair protein RadC [Streptococcus pneumoniae SP23-BS72]
 gi|168996910|gb|ACA37522.1| DNA repair protein RadC [Streptococcus pneumoniae Hungary19A-6]
 gi|172043536|gb|EDT51582.1| DNA repair protein RadC [Streptococcus pneumoniae CDC1873-00]
 gi|183570483|gb|EDT91011.1| DNA repair protein RadC [Streptococcus pneumoniae CDC1087-00]
 gi|183572425|gb|EDT92953.1| DNA repair protein RadC [Streptococcus pneumoniae SP195]
 gi|183577950|gb|EDT98478.1| DNA repair protein RadC [Streptococcus pneumoniae MLV-016]
 gi|194357166|gb|ACF55614.1| DNA repair protein RadC [Streptococcus pneumoniae G54]
 gi|220674290|emb|CAR68832.1| DNA repair protein RadC [Streptococcus pneumoniae ATCC 700669]
 gi|225720674|gb|ACO16528.1| DNA repair protein RadC [Streptococcus pneumoniae 70585]
 gi|225724639|gb|ACO20491.1| DNA repair protein RadC [Streptococcus pneumoniae P1031]
 gi|225728037|gb|ACO23888.1| DNA repair protein RadC [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238491|gb|ADI69622.1| DNA repair protein RadC [Streptococcus pneumoniae TCH8431/19A]
 gi|301794205|emb|CBW36624.1| DNA repair protein RadC [Streptococcus pneumoniae INV104]
 gi|301800059|emb|CBW32654.1| DNA repair protein RadC [Streptococcus pneumoniae OXC141]
 gi|301802020|emb|CBW34749.1| DNA repair protein RadC [Streptococcus pneumoniae INV200]
 gi|302598872|gb|EFL65906.1| DNA repair protein RadC [Streptococcus pneumoniae BS455]
 gi|302635903|gb|EFL66403.1| DNA repair protein RadC [Streptococcus pneumoniae SP14-BS292]
 gi|302638956|gb|EFL69416.1| DNA repair protein RadC [Streptococcus pneumoniae SP-BS293]
 gi|302641524|gb|EFL71886.1| DNA repair protein RadC [Streptococcus pneumoniae BS458]
 gi|302643567|gb|EFL73836.1| DNA repair protein RadC [Streptococcus pneumoniae BS457]
 gi|302645577|gb|EFL75808.1| DNA repair protein RadC [Streptococcus pneumoniae BS397]
 gi|306409266|gb|ADM84693.1| DNA repair protein [Streptococcus pneumoniae AP200]
 gi|327389354|gb|EGE87699.1| hypothetical protein SPAR5_1040 [Streptococcus pneumoniae GA04375]
 gi|332073448|gb|EGI83927.1| RadC, DNA repair family protein [Streptococcus pneumoniae GA17570]
 gi|332075422|gb|EGI85891.1| hypothetical protein SPAR68_1132 [Streptococcus pneumoniae GA41301]
          Length = 226

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G++       REI+   ++  ATS+ILVHNHPSG   PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSQNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + I++ DH+I+    + S++  
Sbjct: 189 HVTKLVKEACELMGIVLLDHLIVSHSNYFSYREK 222


>gi|284049159|ref|YP_003399498.1| DNA repair protein RadC [Acidaminococcus fermentans DSM 20731]
 gi|283953380|gb|ADB48183.1| DNA repair protein RadC [Acidaminococcus fermentans DSM 20731]
          Length = 220

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+    +I  E  S G+++   V+ RE     L   A +I+ VHNHPSG+P PS  D 
Sbjct: 124 VLLNSKGKVIGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTPSREDR 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +  T   + I + DH+IIG   + SFK   ++
Sbjct: 184 ELTRTLWDTGKVMGIPLVDHLIIGDGVYYSFKEHGLL 220


>gi|154483531|ref|ZP_02025979.1| hypothetical protein EUBVEN_01235 [Eubacterium ventriosum ATCC
           27560]
 gi|149735441|gb|EDM51327.1| hypothetical protein EUBVEN_01235 [Eubacterium ventriosum ATCC
           27560]
          Length = 231

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    LI D   ++GT++   +  REI    L   A +IIL+HNHPSG+  PS  D+
Sbjct: 134 MFLDTKCHLIKDMTITKGTVNQSLISSREIFVEALRCDAVNIILIHNHPSGDCTPSRDDM 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  I      + I V DHIIIG  ++ S + L+++
Sbjct: 194 ASTLAISKAGKIIGINVLDHIIIGDRSYSSLRELKLM 230


>gi|298386802|ref|ZP_06996357.1| DNA repair protein RadC [Bacteroides sp. 1_1_14]
 gi|298260476|gb|EFI03345.1| DNA repair protein RadC [Bacteroides sp. 1_1_14]
          Length = 231

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   LI     S G ID     +R I++  L   AT I +VHNHPSGN  PS  D 
Sbjct: 135 LLLNQATRLIDKVRISAGGIDGTYTDVRTILREALLQRATQIAVVHNHPSGNIQPSQPDR 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++I    + +NI + DH+I+ +D F SF    ++
Sbjct: 195 TLTEHIRRAADTMNIRLIDHVIVCEDKFYSFADEGLL 231


>gi|296115179|ref|ZP_06833820.1| DNA repair protein RadC [Gluconacetobacter hansenii ATCC 23769]
 gi|295978280|gb|EFG85017.1| DNA repair protein RadC [Gluconacetobacter hansenii ATCC 23769]
          Length = 230

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    LI D V   GT+D  PVY RE+++R L+L A  +IL HNHPSG+P PS  DI
Sbjct: 129 LFLDAEYRLIEDRVMGVGTVDQAPVYPREVMRRALDLDARILILAHNHPSGDPMPSATDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT +I    + + I +HDH ++G    +SF+ + +I
Sbjct: 189 QMTLHIQQVASVMGIHLHDHFVVGNGRSISFRRMGLI 225


>gi|172061461|ref|YP_001809113.1| DNA repair protein RadC [Burkholderia ambifaria MC40-6]
 gi|238692852|sp|B1YV93|Y2419_BURA4 RecName: Full=UPF0758 protein BamMC406_2419
 gi|171993978|gb|ACB64897.1| DNA repair protein RadC [Burkholderia ambifaria MC40-6]
          Length = 258

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+R L L+A ++I+ HNHPSG   PS  D 
Sbjct: 162 LYLDARHGLIDVEESARGSLTRMAVYPREIVRRALVLNAAALIIAHNHPSGAVQPSAEDR 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++  + DH+++G     SF     +
Sbjct: 222 RLTRVLHEALALIDAKLLDHVVVGTADTFSFARAGWL 258


>gi|115352599|ref|YP_774438.1| DNA repair protein RadC [Burkholderia ambifaria AMMD]
 gi|122322429|sp|Q0BCL9|Y2548_BURCM RecName: Full=UPF0758 protein Bamb_2548
 gi|115282587|gb|ABI88104.1| DNA replication and repair protein RadC [Burkholderia ambifaria
           AMMD]
          Length = 258

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E  +RG++  + VY REIV+R L L+A ++I+ HNHPSG   PS  D 
Sbjct: 162 LYLDARHGLIDVEESARGSLTRMAVYPREIVRRALVLNAAALIIAHNHPSGAVQPSAEDR 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++  + DH+++G     SF     +
Sbjct: 222 RLTRVLHEALALIDAKLLDHVVVGTADTFSFARAGWL 258


>gi|113476272|ref|YP_722333.1| DNA repair protein RadC [Trichodesmium erythraeum IMS101]
 gi|123160702|sp|Q111G4|Y2667_TRIEI RecName: Full=UPF0758 protein Tery_2667
 gi|110167320|gb|ABG51860.1| DNA repair protein RadC [Trichodesmium erythraeum IMS101]
          Length = 243

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/93 (37%), Positives = 50/93 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+  +V + GT      + REI    +   A+ +I+ HNHPSGN  PS  DI
Sbjct: 139 LLLDVKNRLLGTQVITIGTATETLAHPREIFGEVIRQGASRVIISHNHPSGNVEPSPEDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           N+T+ ++     L+I + DHIIIG     S + 
Sbjct: 199 NLTKQLLAGAQILDIPLLDHIIIGNGEHSSLRQ 231


>gi|319902231|ref|YP_004161959.1| DNA repair protein RadC [Bacteroides helcogenes P 36-108]
 gi|319417262|gb|ADV44373.1| DNA repair protein RadC [Bacteroides helcogenes P 36-108]
          Length = 196

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 50/95 (52%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  + LI     S G I      +R I++  +E SAT  I+VHNHPSGN  PS  D ++
Sbjct: 102 LNNASRLIKKVRVSVGGISQTAADVRLIMRILVEASATQFIVVHNHPSGNKQPSRDDKHI 161

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +       +I + DHIII  D + SF    ++
Sbjct: 162 TERVKKAGELFDIRLIDHIIIAGDTYYSFGDEGLL 196


>gi|315122683|ref|YP_004063172.1| DNA repair protein RadC [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496085|gb|ADR52684.1| DNA repair protein RadC [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 237

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 84/97 (86%), Positives = 92/97 (94%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+KH++LIADE+QSRGTIDHVPVY+REIV RCLELSA+SIILVHNHPSGNPNPS+ADI
Sbjct: 141 LFLNKHDVLIADEIQSRGTIDHVPVYLREIVYRCLELSASSIILVHNHPSGNPNPSNADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MTQNII+TL PLNI VHDHIIIGKD FVSFKGLRII
Sbjct: 201 GMTQNIISTLTPLNITVHDHIIIGKDEFVSFKGLRII 237


>gi|242373953|ref|ZP_04819527.1| DNA repair protein RadC [Staphylococcus epidermidis M23864:W1]
 gi|242348307|gb|EES39909.1| DNA repair protein RadC [Staphylococcus epidermidis M23864:W1]
          Length = 229

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+I      +GT++   ++ RE+    +  S+ ++I+VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNIVIKQSWIYKGTLNSSIIHPREVFNIAIRESSNAMIVVHNHPSGDVTPSREDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I + DHIIIG + F S      
Sbjct: 188 TTTLRLKECGAILGIELLDHIIIGDNKFTSLVEAGY 223


>gi|322375315|ref|ZP_08049828.1| DNA repair protein RadC [Streptococcus sp. C300]
 gi|321279578|gb|EFX56618.1| DNA repair protein RadC [Streptococcus sp. C300]
          Length = 226

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 50/94 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   L+  ATS+ILVHNHPSG  +PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVSPSRNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + I+  DH+I+    + S++  
Sbjct: 189 HVTKLVKEACELMGIVFLDHLIVSHSDYFSYREK 222


>gi|293365525|ref|ZP_06612234.1| DNA repair protein RadC [Streptococcus oralis ATCC 35037]
 gi|307703484|ref|ZP_07640426.1| DNA repair protein radC [Streptococcus oralis ATCC 35037]
 gi|291315893|gb|EFE56337.1| DNA repair protein RadC [Streptococcus oralis ATCC 35037]
 gi|307622891|gb|EFO01886.1| DNA repair protein radC [Streptococcus oralis ATCC 35037]
          Length = 226

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 50/94 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   L+  ATS+ILVHNHPSG  +PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVSPSRNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + I+  DH+I+    + S++  
Sbjct: 189 HVTKLVKEACELMGIVFLDHLIVSHSDYFSYREK 222


>gi|215778383|ref|YP_002261523.1| DNA repair protein RadC [Aliivibrio salmonicida LFI1238]
 gi|208011428|emb|CAQ81892.1| DNA repair protein RadC [Aliivibrio salmonicida LFI1238]
          Length = 154

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI     S GTID   VY RE+V+  L  +A ++I  HNHPSG   PS +D 
Sbjct: 58  LLLDNQHRLIEFVEHSVGTIDSASVYPREVVKLALHYNAAAVIFTHNHPSGIAEPSQSDR 117

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++  L  +++ V DH +IG    V+F     I
Sbjct: 118 KITARLLDALALIDVRVLDHFVIGCGETVAFSKRGWI 154


>gi|149006239|ref|ZP_01829951.1| DNA repair protein RadC [Streptococcus pneumoniae SP18-BS74]
 gi|168491982|ref|ZP_02716125.1| DNA repair protein RadC [Streptococcus pneumoniae CDC0288-04]
 gi|168494522|ref|ZP_02718665.1| DNA repair protein RadC [Streptococcus pneumoniae CDC3059-06]
 gi|225854584|ref|YP_002736096.1| DNA repair protein RadC [Streptococcus pneumoniae JJA]
 gi|307127380|ref|YP_003879411.1| DNA repair protein RadC [Streptococcus pneumoniae 670-6B]
 gi|254789664|sp|C1CE75|Y1027_STRZJ RecName: Full=UPF0758 protein SPJ_1027
 gi|147762016|gb|EDK68978.1| DNA repair protein RadC [Streptococcus pneumoniae SP18-BS74]
 gi|183573793|gb|EDT94321.1| DNA repair protein RadC [Streptococcus pneumoniae CDC0288-04]
 gi|183575616|gb|EDT96144.1| DNA repair protein RadC [Streptococcus pneumoniae CDC3059-06]
 gi|225722254|gb|ACO18107.1| DNA repair protein RadC [Streptococcus pneumoniae JJA]
 gi|306484442|gb|ADM91311.1| DNA repair protein RadC [Streptococcus pneumoniae 670-6B]
 gi|332075043|gb|EGI85514.1| hypothetical protein SPAR148_1048 [Streptococcus pneumoniae
           GA17545]
          Length = 226

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G++       REI+   ++  ATS+ILVHNHPSG   PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSQNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + I++ DH+I+    + S++  
Sbjct: 189 HVTKLVKEACELMGIVLLDHLIVSHSNYFSYREK 222


>gi|186475352|ref|YP_001856822.1| DNA repair protein RadC [Burkholderia phymatum STM815]
 gi|184191811|gb|ACC69776.1| DNA repair protein RadC [Burkholderia phymatum STM815]
          Length = 242

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  E  SRG++  + VY REIV+R L ++A S+I+ HNHPSG   PS +D 
Sbjct: 146 LFLDTRHRLIRSEENSRGSLTRMAVYPREIVRRALSVNAASLIVAHNHPSGAVKPSASDR 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T  +  TL  +++ + DH++IG     SF     
Sbjct: 206 QLTHVLRDTLALIDVQLIDHLVIGAHDTFSFARAGW 241


>gi|116048641|ref|YP_792559.1| hypothetical protein PA14_54860 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115583862|gb|ABJ09877.1| hypothetical protein PA14_54860 [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 202

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 5/97 (5%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD            RGT++  P+Y R +V+R L  +A  +++ HNHPSG   PS ADI
Sbjct: 111 VFLDAQ-----WRALFRGTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATPSQADI 165

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   LN ++I + DH +IG+    SF   +++
Sbjct: 166 AATRQLKAALNLVDIELLDHFVIGRGEPFSFFDAQLL 202


>gi|57239372|ref|YP_180508.1| DNA repair protein radC-like protein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579339|ref|YP_197551.1| DNA repair protein radC-like protein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161451|emb|CAH58376.1| DNA repair protein RadC [Ehrlichia ruminantium str. Welgevonden]
 gi|58417965|emb|CAI27169.1| DNA repair protein radC homolog [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 230

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 63/97 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+    L+ADE+Q  GT++  P+YIRE++++ L L ATSII+ HNHPSG+  PS ADI
Sbjct: 134 LYLNTKFKLLADEIQDVGTVNQTPLYIREVIKKSLLLGATSIIIAHNHPSGDATPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +    + + I + DH+I+  +   SFK   ++
Sbjct: 194 EVTNQLAIACHNMGITLIDHVIVTSNTHYSFKSHDLL 230


>gi|254479635|ref|ZP_05092939.1| DNA repair protein RadC [Carboxydibrachium pacificum DSM 12653]
 gi|214034431|gb|EEB75201.1| DNA repair protein RadC [Carboxydibrachium pacificum DSM 12653]
          Length = 208

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/87 (43%), Positives = 54/87 (62%)

Query: 10  IADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITT 69
           IA E  S G+++   V+ RE+ +  +E SA+SIILVHNHPSG+P PS  D+ +T+ ++  
Sbjct: 118 IAIETISIGSLNTSIVHPREVFKAAIERSASSIILVHNHPSGDPTPSREDVEVTKRLVEA 177

Query: 70  LNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            N L I V DH+IIG    +S K    
Sbjct: 178 GNILGIKVLDHVIIGDGRGISLKEKGY 204


>gi|293378952|ref|ZP_06625107.1| putative DNA repair protein RadC [Enterococcus faecium PC4.1]
 gi|292642493|gb|EFF60648.1| putative DNA repair protein RadC [Enterococcus faecium PC4.1]
          Length = 147

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N ++A      G+++   V+ RE+ +  +  +A S+IL H HPSG+  PS  DI
Sbjct: 50  MCLNTRNNVVAVHRCHVGSLNASLVHPREVFKSAILNNAASVILAHQHPSGDITPSMEDI 109

Query: 61  NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97
           N+T+ +      L I V DH+++   ++F S K    I
Sbjct: 110 NVTKRLAEAGKLLGIEVLDHLVVNSDNSFTSLKERGYI 147


>gi|160892638|ref|ZP_02073428.1| hypothetical protein CLOL250_00168 [Clostridium sp. L2-50]
 gi|156865679|gb|EDO59110.1| hypothetical protein CLOL250_00168 [Clostridium sp. L2-50]
          Length = 232

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  D  + L+ +   S GT+DH  V  R+I    L+  A  I+L+HNHPSGNP PS+ DI
Sbjct: 135 LMFDSSHHLLKECRLSEGTVDHAVVSPRDIFIDALKYQAVYIVLLHNHPSGNPEPSNPDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I + DHII+G + FVS     II
Sbjct: 195 LLTKRVEEAGKTLGIRLSDHIILGNNCFVSLAERGII 231


>gi|160935804|ref|ZP_02083179.1| hypothetical protein CLOBOL_00694 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441548|gb|EDP19258.1| hypothetical protein CLOBOL_00694 [Clostridium bolteae ATCC
           BAA-613]
          Length = 178

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+      A E+ + G ++   +  R+I +  +  +A  II  HNHPSG+P PS  D  +
Sbjct: 75  LNTKLEPQALEIAAVGGLNACSIDCRDIFKHAVLNNAAFIICFHNHPSGDPKPSMEDRKL 134

Query: 63  TQNIITTLNPLNIIVHDHIIIGKD-AFVSFKGLRII 97
           T+ +      L I + DHII+G+     SFK   ++
Sbjct: 135 TKRLEECGKILGIPLIDHIIVGEGPCCYSFKEQGML 170


>gi|220907196|ref|YP_002482507.1| DNA repair protein RadC [Cyanothece sp. PCC 7425]
 gi|254789645|sp|B8HRF8|Y1778_CYAP4 RecName: Full=UPF0758 protein Cyan7425_1778
 gi|219863807|gb|ACL44146.1| DNA repair protein RadC [Cyanothece sp. PCC 7425]
          Length = 243

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 52/93 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI  +V + GT      + R+I +  +   AT +I+ HNHPSGN  PS  D+
Sbjct: 139 LLLDVRHRLIGTQVITIGTATETIAHPRDIFREVIRQGATRVIVAHNHPSGNVEPSPEDL 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +TQ +++    L+I + DH+I+G   F S + 
Sbjct: 199 ALTQQLLSGAKFLDIPLLDHLILGNGNFRSLRQ 231


>gi|293371990|ref|ZP_06618389.1| DNA repair protein [Bacteroides ovatus SD CMC 3f]
 gi|292633001|gb|EFF51583.1| DNA repair protein [Bacteroides ovatus SD CMC 3f]
          Length = 148

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 49/95 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++   ++   + S G I      +R I+Q  L  ++ +IIL HNHPSGN  PS  D+
Sbjct: 52  LFLNQAKQVLGYTLISEGGITETCADVRVILQAALLTNSVAIILAHNHPSGNLKPSRQDM 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +      + I V DH+I+    + SF    
Sbjct: 112 EITKQVKNAAQLMRITVLDHLILTDAGYYSFSDEG 146


>gi|227877311|ref|ZP_03995384.1| DNA repair protein [Lactobacillus crispatus JV-V01]
 gi|256842873|ref|ZP_05548361.1| DNA repair protein [Lactobacillus crispatus 125-2-CHN]
 gi|256848753|ref|ZP_05554187.1| DNA repair protein [Lactobacillus crispatus MV-1A-US]
 gi|262045839|ref|ZP_06018803.1| DNA repair protein [Lactobacillus crispatus MV-3A-US]
 gi|293381707|ref|ZP_06627688.1| DNA repair protein RadC [Lactobacillus crispatus 214-1]
 gi|312977608|ref|ZP_07789355.1| DNA repair protein RadC [Lactobacillus crispatus CTV-05]
 gi|227863167|gb|EEJ70613.1| DNA repair protein [Lactobacillus crispatus JV-V01]
 gi|256614293|gb|EEU19494.1| DNA repair protein [Lactobacillus crispatus 125-2-CHN]
 gi|256714292|gb|EEU29279.1| DNA repair protein [Lactobacillus crispatus MV-1A-US]
 gi|260573798|gb|EEX30354.1| DNA repair protein [Lactobacillus crispatus MV-3A-US]
 gi|290921754|gb|EFD98775.1| DNA repair protein RadC [Lactobacillus crispatus 214-1]
 gi|310895347|gb|EFQ44414.1| DNA repair protein RadC [Lactobacillus crispatus CTV-05]
          Length = 210

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L++D  N +IA++   +GT++    + REI +  +    + I + HNHPSG   PS +D+
Sbjct: 111 LYIDNSNHIIAEKKLFQGTLNRSIAHPREIFRWAVIYGCSGIFIAHNHPSGKLTPSASDL 170

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+++      + I   DH I+G+  ++S +  
Sbjct: 171 ELTESLRQAAKMMKIDFLDHFIVGEGQYLSLREK 204


>gi|226227362|ref|YP_002761468.1| DNA repair protein RadC [Gemmatimonas aurantiaca T-27]
 gi|226090553|dbj|BAH38998.1| DNA repair protein RadC [Gemmatimonas aurantiaca T-27]
          Length = 244

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 58/95 (61%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  + L  D + +RG ++   V+ RE+ +  +   A ++ILVHNHPSG+P PS  D  +
Sbjct: 150 LDAQHRLERDVLITRGLLNSSLVHPREVFREAIAERAAAVILVHNHPSGDPTPSAEDRAV 209

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++     L+I VHDHII+G+  +VSF    ++
Sbjct: 210 TEQLVAAGRLLDIPVHDHIIVGRGRYVSFAEAGLL 244


>gi|304437696|ref|ZP_07397648.1| DNA repair protein RadC [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304369329|gb|EFM23002.1| DNA repair protein RadC [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 225

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 51/95 (53%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L   N L+     S GT+ +  V+ RE+ +  +   A  +I+ HNHPSG+P PS  D  +
Sbjct: 131 LSAKNELLMLADVSTGTLTNALVHPREVFEPAIRCGAAHVIVAHNHPSGDPTPSAEDHRL 190

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+++      L I V DH+++ +D F SF    ++
Sbjct: 191 TRSLYEAGKLLGIPVTDHVVVARDGFFSFAEEGLL 225


>gi|154491063|ref|ZP_02031004.1| hypothetical protein PARMER_00982 [Parabacteroides merdae ATCC
           43184]
 gi|154088811|gb|EDN87855.1| hypothetical protein PARMER_00982 [Parabacteroides merdae ATCC
           43184]
          Length = 208

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + +++ N ++     S G ++     IR I+Q  +  +A++IIL HNHPSGN  PS  D 
Sbjct: 112 ILMNRANKVLGVCHISEGGLNETSADIRIIMQAAILGNASAIILAHNHPSGNIQPSMQDD 171

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I + DH+II  + + S+     I
Sbjct: 172 QVTKRVKEIAKLIGINLLDHLIITDETYYSYSENGRI 208


>gi|150005694|ref|YP_001300438.1| DNA repair protein [Bacteroides vulgatus ATCC 8482]
 gi|149934118|gb|ABR40816.1| DNA repair protein [Bacteroides vulgatus ATCC 8482]
          Length = 153

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ + ++   + S G I    V +R I+Q  L  ++ ++IL HNHPSGN  PS  D+
Sbjct: 57  LFLNQSSQVLGYTLISEGGITDTTVDVRVILQAALLTNSVALILAHNHPSGNLKPSRQDM 116

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I V DH+I+    + SF     +
Sbjct: 117 EITKQVKNAAQLMRITVIDHLILTDAGYYSFADEGQL 153


>gi|295692678|ref|YP_003601288.1| DNA repair protein radc [Lactobacillus crispatus ST1]
 gi|295030784|emb|CBL50263.1| DNA repair protein RadC [Lactobacillus crispatus ST1]
          Length = 210

 Score =  113 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L++D  N +IA++   +GT++    + REI +  +    + I + HNHPSG   PS +D+
Sbjct: 111 LYIDNSNHIIAEKKLFQGTLNRSIAHPREIFRWAVIYGCSGIFIAHNHPSGKLTPSASDL 170

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+++      + I   DH I+G+  ++S +  
Sbjct: 171 ELTESLRQAAKMMKIDFLDHFIVGEGQYLSLREK 204


>gi|163752940|ref|ZP_02160064.1| putative DNA repair protein [Kordia algicida OT-1]
 gi|161326672|gb|EDP97997.1| putative DNA repair protein [Kordia algicida OT-1]
          Length = 231

 Score =  113 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N ++     S+G I    V IR +++  LE+ A +IIL HNHPSG    S AD 
Sbjct: 135 IYLNNSNKVLKKTRLSKGGITGTLVDIRLVLKTALEVGAVAIILAHNHPSGTLKASAADK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      ++I V DH+II +  + SF    ++
Sbjct: 195 AITKKLKLGAENIDIKVLDHLIITEKEYFSFADENLL 231


>gi|270292791|ref|ZP_06199002.1| DNA repair protein RadC [Streptococcus sp. M143]
 gi|270278770|gb|EFA24616.1| DNA repair protein RadC [Streptococcus sp. M143]
          Length = 231

 Score =  113 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 50/94 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   L+  ATS+ILVHNHPSG  +PS  D 
Sbjct: 134 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVSPSRNDD 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + I+  DH+I+    + S++  
Sbjct: 194 HVTKLVKEACELMGIVFLDHLIVSHSDYFSYREK 227


>gi|146297589|ref|YP_001181360.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145411165|gb|ABP68169.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 163

 Score =  113 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    L A    SRGT+D  P   REI +R L  +  SII+ HNHP G+  PS  DI
Sbjct: 67  LCLDVQLNLNAIFEVSRGTLDMAPANTREIFKRVLLTNCHSIIIAHNHPGGSAKPSMDDI 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ I      L+I ++DHII+ ++ + SF    I+
Sbjct: 127 KTTEKIKEAAQLLDIRLNDHIIVTEEDYYSFSQAGIL 163


>gi|60680744|ref|YP_210888.1| putative DNA repair protein [Bacteroides fragilis NCTC 9343]
 gi|60492178|emb|CAH06941.1| putative DNA repair protein [Bacteroides fragilis NCTC 9343]
          Length = 150

 Score =  113 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N  +   + S+G +    + ++ I+Q  L++ A+ IIL HNHPSGN  PS+ D 
Sbjct: 54  MFLNRANKALGVSLISKGGMAETVMDVKIILQTALKVHASGIILSHNHPSGNLRPSEPDK 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L++ + DHII+ ++++ SF    +I
Sbjct: 114 QITSKIKEACKVLDLHLLDHIILTEESYYSFADEGLI 150


>gi|223044114|ref|ZP_03614153.1| DNA repair protein RadC [Staphylococcus capitis SK14]
 gi|222442508|gb|EEE48614.1| DNA repair protein RadC [Staphylococcus capitis SK14]
          Length = 227

 Score =  113 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+I      +GT++   ++ RE+    +  S+ +II+VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNIVIKQSWIFKGTLNSSIIHPREVFNIAIRESSNAIIIVHNHPSGDVTPSREDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +      L I V DHIIIG + F S      
Sbjct: 188 TTTLRLKECGAILGIDVLDHIIIGDNQFTSLVEAGY 223


>gi|331266304|ref|YP_004325934.1| DNA repair protein RadC [Streptococcus oralis Uo5]
 gi|326682976|emb|CBZ00593.1| DNA repair protein RadC [Streptococcus oralis Uo5]
          Length = 226

 Score =  113 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 50/94 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   L+  ATS+ILVHNHPSG  +PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVSPSRNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + I+  DH+I+    + S++  
Sbjct: 189 HVTKLVKEACELMGIVFLDHLIVSHSDYFSYREK 222


>gi|182684160|ref|YP_001835907.1| DNA repair protein RadC [Streptococcus pneumoniae CGSP14]
 gi|182629494|gb|ACB90442.1| DNA repair protein RadC [Streptococcus pneumoniae CGSP14]
          Length = 231

 Score =  113 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G++       REI+   ++  ATS+ILVHNHPSG   PS  D 
Sbjct: 134 LYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSQNDD 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + I++ DH+I+    + S++  
Sbjct: 194 HVTKLVKEACELMGIVLLDHLIVSHSNYFSYREK 227


>gi|251782289|ref|YP_002996591.1| DNA repair protein RadC [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390918|dbj|BAH81377.1| DNA repair protein RadC [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323127188|gb|ADX24485.1| DNA repair protein RadC [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 226

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +I ++    GT+       REI+    +  ATS+I+VHNHPSG+ +PS  D 
Sbjct: 129 LYLDSQNRVIEEKTIFIGTVRRSIAEPREILYYACKNMATSLIVVHNHPSGSIDPSPNDY 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ I  +   L II  DHII+   ++ SF+  
Sbjct: 189 AFTEKIKRSCEDLGIICLDHIIVSYQSYYSFREK 222


>gi|221633793|ref|YP_002523019.1| DNA repair protein RadC-like protein [Thermomicrobium roseum DSM
           5159]
 gi|221156245|gb|ACM05372.1| DNA repair protein radC homolog [Thermomicrobium roseum DSM 5159]
          Length = 261

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N ++     ++G ++   V I E+ +  +  +  +++L+HNHPSG+P PS  DI
Sbjct: 161 VLLDTRNRVVRTVTVAQGHVNGAQVRIAELFREAIRANTPALVLLHNHPSGDPTPSRQDI 220

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T++ +     L I V DH++IG   F S + L +
Sbjct: 221 ELTESAVEAGTLLGIEVVDHLVIGHGRFCSLRRLGL 256


>gi|254520497|ref|ZP_05132553.1| DNA repair protein [Clostridium sp. 7_2_43FAA]
 gi|226914246|gb|EEH99447.1| DNA repair protein [Clostridium sp. 7_2_43FAA]
          Length = 151

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 1/97 (1%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L+  N      + S G+++   V+ RE+ +  +  ++ SIIL HNHPSG+  PS  DIN
Sbjct: 55  CLNTKNEPTNLNIVSIGSLNSSIVHPREVFKLAILGNSASIILFHNHPSGDTTPSKEDIN 114

Query: 62  MTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97
           +T+ I      + I + DHII+G  + + S K   II
Sbjct: 115 ITERIKEAGKIIGIELIDHIILGDENKYTSLKEKGII 151


>gi|322387839|ref|ZP_08061447.1| DNA repair protein RadC [Streptococcus infantis ATCC 700779]
 gi|321141341|gb|EFX36838.1| DNA repair protein RadC [Streptococcus infantis ATCC 700779]
          Length = 226

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 50/94 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   L+  ATS+ILVHNHPSG   PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVVPSPNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + +++ DH+I+    + S++  
Sbjct: 189 HVTKLVKEACELMGLVLLDHLIVSHSDYFSYREK 222


>gi|291563258|emb|CBL42074.1| DNA replication and repair protein RadC [butyrate-producing
           bacterium SS3/4]
          Length = 235

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 34/88 (38%), Positives = 48/88 (54%)

Query: 9   LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68
           L+ D   SRGT++      REI    L   A  IIL+HNHPSG+P PS  D   T+ +  
Sbjct: 145 LLRDITVSRGTVNASCATPREIYIEALRFRACGIILLHNHPSGDPAPSREDCLFTERVRE 204

Query: 69  TLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
               + + + DHIIIG +++VS +   I
Sbjct: 205 AGRLVGVPLLDHIIIGDNSYVSLRERGI 232


>gi|218778342|ref|YP_002429660.1| DNA repair protein RadC [Desulfatibacillum alkenivorans AK-01]
 gi|218759726|gb|ACL02192.1| DNA repair protein RadC [Desulfatibacillum alkenivorans AK-01]
          Length = 265

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N ++  E    G+++   VY RE++ + L+  A++++L HNHPSGN  PS  DI
Sbjct: 153 VYLDVQNRILNMETPFEGSLNASHVYTRELIDKALKTGASAVLLAHNHPSGNTKPSKNDI 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97
            +T  + T    + I + +H+IIGK   + SF     +
Sbjct: 213 QLTYTLFTAFRSVEIHLLEHLIIGKQGEYYSFADHGYL 250


>gi|237723850|ref|ZP_04554331.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229437865|gb|EEO47942.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 217

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI     S G I+  PV IR I+++ L  +A S I+VHNHPSG   PS AD 
Sbjct: 121 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSGADD 180

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L+I + DH+I+  + + S+     +
Sbjct: 181 RLTEAVKKAAGTLDIHLLDHVIVAGNNYYSYADEGKL 217


>gi|218263372|ref|ZP_03477499.1| hypothetical protein PRABACTJOHN_03185 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222780|gb|EEC95430.1| hypothetical protein PRABACTJOHN_03185 [Parabacteroides johnsonii
           DSM 18315]
          Length = 190

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + ++K N ++     S G ++     IR I+Q  +  +A++IIL HNHPSGN  PS  D 
Sbjct: 94  ILMNKANKVLGICPISEGGLNETSADIRIIMQAAILGNASAIILAHNHPSGNIQPSMQDD 153

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +  T   + I + DH+II  + + S+     I
Sbjct: 154 QVTKRVKETAKLIGINLLDHLIITDETYYSYSENGRI 190


>gi|309800342|ref|ZP_07694510.1| DNA repair protein RadC [Streptococcus infantis SK1302]
 gi|308116029|gb|EFO53537.1| DNA repair protein RadC [Streptococcus infantis SK1302]
          Length = 175

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 50/94 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   L+  ATS+ILVHNHPSG   PS  D 
Sbjct: 78  LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVMPSRNDD 137

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + +++ DH+I+    + S++  
Sbjct: 138 HVTKLVKEACELMGLVLLDHLIVSHSDYFSYREK 171


>gi|315613236|ref|ZP_07888146.1| DNA repair protein RadC [Streptococcus sanguinis ATCC 49296]
 gi|315314798|gb|EFU62840.1| DNA repair protein RadC [Streptococcus sanguinis ATCC 49296]
          Length = 226

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 50/94 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   L+  ATS+ILVHNHPSG  +PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVSPSRNDN 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + I+  DH+I+    + S++  
Sbjct: 189 HVTKLVKEACELMGIVFLDHLIVSHSDYFSYREK 222


>gi|116516612|ref|YP_816450.1| DNA repair protein RadC [Streptococcus pneumoniae D39]
 gi|39931955|sp|Q8DPU7|Y996_STRR6 RecName: Full=UPF0758 protein spr0996
 gi|122278664|sp|Q04KJ8|Y975_STRP2 RecName: Full=UPF0758 protein SPD_0975
 gi|116077188|gb|ABJ54908.1| DNA repair protein RadC [Streptococcus pneumoniae D39]
          Length = 226

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G++       REI+   ++  ATS++LVHNHPSG   PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLVLVHNHPSGAVAPSQNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + I++ DH+I+    + S++  
Sbjct: 189 HVTKLVKEACELMGIVLLDHLIVSHSNYFSYREK 222


>gi|302875597|ref|YP_003844230.1| DNA repair protein RadC [Clostridium cellulovorans 743B]
 gi|307690127|ref|ZP_07632573.1| DNA repair protein RadC [Clostridium cellulovorans 743B]
 gi|302578454|gb|ADL52466.1| DNA repair protein RadC [Clostridium cellulovorans 743B]
          Length = 228

 Score =  113 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N ++  +  S G+++   V+ RE+    ++  + SII+ HNHPSG+P PS  DI
Sbjct: 132 IMLNVKNFVVKIKDVSMGSLNSSIVHPREVFVDAIKEGSASIIICHNHPSGDPTPSKEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      + I + DHII+G   +VS K   ++
Sbjct: 192 NITLRLKEASKIIGIDLLDHIIVGNGTYVSLKEKDVL 228


>gi|238927763|ref|ZP_04659523.1| DNA repair protein RadC [Selenomonas flueggei ATCC 43531]
 gi|238884479|gb|EEQ48117.1| DNA repair protein RadC [Selenomonas flueggei ATCC 43531]
          Length = 225

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 52/95 (54%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L   N ++     S GT+ +  V+ RE+ +  +  SA  II+ HNHPSG+P PS  D  +
Sbjct: 131 LSAKNEVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDPAPSAEDHRL 190

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+++      L I V DH+I+ +D F SF    ++
Sbjct: 191 TRSLHEAGALLGIPVADHVIVARDGFFSFAEAGLL 225


>gi|189467426|ref|ZP_03016211.1| hypothetical protein BACINT_03814 [Bacteroides intestinalis DSM
           17393]
 gi|189435690|gb|EDV04675.1| hypothetical protein BACINT_03814 [Bacteroides intestinalis DSM
           17393]
          Length = 150

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N  +   + S+G +    + ++ I+Q  L++ A+ IIL HNHPSGN  PS+ D 
Sbjct: 54  MFLNRANKALGVSLISKGGMAETVMDVKIILQTALKVHASGIILSHNHPSGNLRPSEPDK 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L++ + DHII+ ++++ SF    ++
Sbjct: 114 QITSKIKEACKVLDLHLLDHIILTEESYYSFADEGLL 150


>gi|322411656|gb|EFY02564.1| DNA repair protein RadC [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 226

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +I ++    GT+       REI+    +  ATS+I+VHNHPSG+ +PS  D 
Sbjct: 129 LYLDSQNRVIEEKTIFIGTVRRSIAEPREILYYACKNMATSLIVVHNHPSGSIDPSPNDY 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ I  +   + II  DHII+   ++ SF+  
Sbjct: 189 AFTEKIKRSCEDIGIICLDHIIVSYQSYYSFREK 222


>gi|255015601|ref|ZP_05287727.1| putative DNA repair protein [Bacteroides sp. 2_1_7]
          Length = 220

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  + LI     S G I+  PV IR I+++ L  +A S I+VHNHPSG   PS AD 
Sbjct: 121 LLLNSSSKLIRKVRISCGEINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADD 180

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L+I + DH+I+  + + S+     +
Sbjct: 181 RLTEAVKKAAETLDIRLLDHVIVAGNIYYSYADEGRL 217


>gi|161507304|ref|YP_001577258.1| DNA repair protein RadC [Lactobacillus helveticus DPC 4571]
 gi|260102644|ref|ZP_05752881.1| DNA repair protein [Lactobacillus helveticus DSM 20075]
 gi|160348293|gb|ABX26967.1| DNA repair protein RadC [Lactobacillus helveticus DPC 4571]
 gi|260083549|gb|EEW67669.1| DNA repair protein [Lactobacillus helveticus DSM 20075]
 gi|323466816|gb|ADX70503.1| DNA repair protein RadC [Lactobacillus helveticus H10]
          Length = 207

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 52/96 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L++D  N ++A++   +GT++    + REI +  +    + I + HNHPSG   PS  D 
Sbjct: 111 LYVDNGNRIVAEKKIFQGTLNKSVAHPREIFRWAVIYDCSGIFIAHNHPSGKLIPSSNDF 170

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+++      + I + DH I+G+  ++S +   +
Sbjct: 171 ELTKDLYRAAKMMKIDLLDHFIVGQGQYLSMREKEL 206


>gi|147678792|ref|YP_001213007.1| DNA repair protein [Pelotomaculum thermopropionicum SI]
 gi|146274889|dbj|BAF60638.1| hypothetical DNA repair proteins [Pelotomaculum thermopropionicum
           SI]
          Length = 140

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N   A    + GT++   V+ RE+ +  L  ++  IIL HNHPSG+P PS  DI
Sbjct: 43  ICLNTRNEPTAVHTVAVGTLNSSQVHPREVFKVALLANSAGIILAHNHPSGDPAPSREDI 102

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
            +T+ +    + L I V DHI+IG    + S     +I
Sbjct: 103 EITRRLKECGDLLGISVLDHIVIGSGGQYTSLLQKLLI 140


>gi|322391926|ref|ZP_08065390.1| DNA repair protein RadC [Streptococcus peroris ATCC 700780]
 gi|321145152|gb|EFX40549.1| DNA repair protein RadC [Streptococcus peroris ATCC 700780]
          Length = 226

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   L+  ATS+ILVHNHPSG  +PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKHMATSVILVHNHPSGAVSPSPNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + +++ DH+I+    + S++  
Sbjct: 189 HVTKLVKEACELMGLVLLDHLIVSHSDYFSYREK 222


>gi|268323410|emb|CBH36998.1| probable DNA repair protein radC homolog [uncultured archaeon]
 gi|268324046|emb|CBH37634.1| putative DNA repair protein radC [uncultured archaeon]
          Length = 152

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 55/95 (57%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +I + V + G ++   V+ RE+    +   A SIILVHNHPSG+  PS  D+ +
Sbjct: 58  LNGANEVIGNRVVTVGLLNSNQVHPREVFSNPIVDRAASIILVHNHPSGDTEPSPEDVAI 117

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++     L I +HDH+I+ K+ + S K   +I
Sbjct: 118 TKRLVEAGELLGIKIHDHVIVSKNGYTSMKERGVI 152


>gi|186686420|ref|YP_001869616.1| DNA repair protein RadC [Nostoc punctiforme PCC 73102]
 gi|229470321|sp|B2IY74|Y6401_NOSP7 RecName: Full=UPF0758 protein Npun_R6401
 gi|186468872|gb|ACC84673.1| DNA repair protein RadC [Nostoc punctiforme PCC 73102]
          Length = 243

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 32/93 (34%), Positives = 47/93 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+  +V + GT        R+I +  +   AT  I+ HNHPSGN  PS  DI
Sbjct: 139 VLLDVKNRLLGTQVITIGTATETLASPRDIFREVIRQGATRAIVAHNHPSGNLEPSQEDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T+ ++     L I V DH+I+G     S + 
Sbjct: 199 ELTRQLLAGAQLLGIPVLDHLILGNGNHQSLRE 231


>gi|224024589|ref|ZP_03642955.1| hypothetical protein BACCOPRO_01315 [Bacteroides coprophilus DSM
           18228]
 gi|224017811|gb|EEF75823.1| hypothetical protein BACCOPRO_01315 [Bacteroides coprophilus DSM
           18228]
          Length = 230

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++ + LI     S+G +    V +R I++  L   AT+++L HNHPSGN  PS  D 
Sbjct: 134 MLLNQASRLIDALRISQGGLASTQVDVRCILREALLKRATALVLCHNHPSGNTRPSTDDD 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      +NI + DH+I+    + S+     +
Sbjct: 194 RLTQALSQAAKVMNIRMLDHLIVSDGGYYSYADEGRL 230


>gi|138898342|ref|YP_001127527.1| DNA repair protein RadC [Geobacillus thermodenitrificans NG80-2]
 gi|134268588|gb|ABO68782.1| DNA repair protein RadC [Geobacillus thermodenitrificans NG80-2]
          Length = 126

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N ++A      G+++   V+ RE+ +  +  +A SII+ H HPSG+  PS  D+
Sbjct: 28  MCLNTKNEVVAVHRCHIGSLNASIVHPREVFKAAILNNAASIIVAHQHPSGDVTPSKEDV 87

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRI 96
            MT+ +      L I V DH++I  K  + S K    
Sbjct: 88  EMTKRLAEAGRILGIEVLDHLVINYKAEYTSLKERGF 124


>gi|29348394|ref|NP_811897.1| DNA repair protein [Bacteroides thetaiotaomicron VPI-5482]
 gi|29340298|gb|AAO78091.1| DNA repair protein [Bacteroides thetaiotaomicron VPI-5482]
          Length = 148

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 51/95 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ + ++   + S G I    V +R I+Q  L  ++ +IIL HNHPSG+  PS  D+
Sbjct: 52  LFLNQASQVLGYTLISEGGITDTTVDVRVILQAALLTNSVAIILAHNHPSGSMKPSRQDM 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +      + I V DH+I+    + SF    
Sbjct: 112 EITKQVKEAARLMRITVTDHLILTDAGYYSFADEG 146


>gi|284036885|ref|YP_003386815.1| DNA repair protein RadC [Spirosoma linguale DSM 74]
 gi|283816178|gb|ADB38016.1| DNA repair protein RadC [Spirosoma linguale DSM 74]
          Length = 157

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD+ N  +A    + G         + I    L+  AT IIL HNHPSGN  PS+AD 
Sbjct: 59  LLLDQQNNCLAVSEIATGGTSACLADPKVIFATALKTRATGIILAHNHPSGNLAPSEADK 118

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      L+I V DH+I+    + SF    ++
Sbjct: 119 SLTRKLKDGGKLLDIAVLDHLIVTSHNYRSFADDGLM 155


>gi|15903040|ref|NP_358590.1| DNA repair protein RadC [Streptococcus pneumoniae R6]
 gi|15458611|gb|AAK99800.1| DNA repair protein [Streptococcus pneumoniae R6]
          Length = 231

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G++       REI+   ++  ATS++LVHNHPSG   PS  D 
Sbjct: 134 LYLNTQNQIIHQQTIFIGSVTRSIAEPREILHYAIKHMATSLVLVHNHPSGAVAPSQNDD 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + I++ DH+I+    + S++  
Sbjct: 194 HVTKLVKEACELMGIVLLDHLIVSHSNYFSYREK 227


>gi|189467519|ref|ZP_03016304.1| hypothetical protein BACINT_03909 [Bacteroides intestinalis DSM
           17393]
 gi|189435783|gb|EDV04768.1| hypothetical protein BACINT_03909 [Bacteroides intestinalis DSM
           17393]
          Length = 148

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 50/95 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ + ++   + S G I      +R I+Q  L  ++ +IIL HNHPSG+  PS  DI
Sbjct: 52  LFLNQASQILGYTLISEGGITETCADVRVILQAALLTNSVAIILAHNHPSGSMKPSRQDI 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +      + I V DH+I+    + SF    
Sbjct: 112 EITKQVKDAARLMRITVTDHLILTDAGYYSFADEG 146


>gi|312621801|ref|YP_004023414.1| DNA repair protein radc [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202268|gb|ADQ45595.1| DNA repair protein RadC [Caldicellulosiruptor kronotskyensis 2002]
          Length = 163

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    L A    SRGT++  P   REI +R L  +  SII+ HNHP G+  PS  DI
Sbjct: 67  LCLDVQLNLNAIFEVSRGTLNFAPANTREIFKRVLLTNCHSIIIAHNHPGGSAKPSMDDI 126

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + T+ I      L+I ++DHIII +D++ SF    I+
Sbjct: 127 DTTKKIKEAAQLLDIRLNDHIIIAEDSYYSFSQAGIL 163


>gi|237722358|ref|ZP_04552839.1| DNA repair protein [Bacteroides sp. 2_2_4]
 gi|229448168|gb|EEO53959.1| DNA repair protein [Bacteroides sp. 2_2_4]
          Length = 151

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 49/95 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++   ++   + S G I      IR I+Q  L  ++ +IIL HNHPSGN  PS  D+
Sbjct: 55  LFLNQAKQVLGYTLISEGGITETCADIRVILQAALLTNSVAIILAHNHPSGNLKPSRQDM 114

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +      + I V DH+I+    + SF    
Sbjct: 115 EITKQVKNAAQLMRITVLDHLILTDAGYYSFSDEG 149


>gi|325106478|ref|YP_004276132.1| DNA replication and repair protein RadC [Pedobacter saltans DSM
           12145]
 gi|324975326|gb|ADY54310.1| DNA replication and repair protein RadC [Pedobacter saltans DSM
           12145]
          Length = 234

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++ N +++  + S+G         + I +  LE +A+SI+L HNHPSGN  PS AD+
Sbjct: 138 VLLNRTNRVLSKVLISKGGQSATVSDPKIIFKSALEHNASSIVLAHNHPSGNLKPSSADL 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L+I V DH+I  +  + SF    ++
Sbjct: 198 QLTKKMVEGGKILDIGVLDHLIFAERKYFSFADEGLM 234


>gi|257413989|ref|ZP_04744897.2| DNA repair protein RadC [Roseburia intestinalis L1-82]
 gi|257201600|gb|EEU99884.1| DNA repair protein RadC [Roseburia intestinalis L1-82]
 gi|291536173|emb|CBL09285.1| DNA replication and repair protein RadC [Roseburia intestinalis
           M50/1]
 gi|291538964|emb|CBL12075.1| DNA replication and repair protein RadC [Roseburia intestinalis
           XB6B4]
          Length = 243

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 51/96 (53%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
             D    +  D++ S G+ +   V  RE+ +  +   A  +ILVHNHPSG P PS AD  
Sbjct: 146 MFDNKCHMKGDKLLSVGSANETIVSPREVFETAINCHAAHLILVHNHPSGIPEPSHADDV 205

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ I+     + I + DH+IIG  ++ S++    I
Sbjct: 206 VTKRILNCGQLMGIPLSDHVIIGDHSYFSYRENNRI 241


>gi|6958313|gb|AAF32528.1|AF135191_1 RadC [Bacillus sp. NEB-606]
          Length = 119

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N   A  +   G+++   V+ RE+++  +  ++ S+I+ HNHPS +P PS  DI
Sbjct: 23  ICLDTKNQPTAINICHVGSLNASLVHPREVMKPAILSNSASVIVAHNHPSLDPTPSKEDI 82

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ +I     + I + DHI++G + +VS K  R I
Sbjct: 83  NVTKRLIEAGRIMGIDILDHIVVGGNKYVSLKEKRYI 119


>gi|309385827|gb|ADO66756.1| putative DNA repair protein RadC [Enterococcus faecium]
          Length = 147

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N ++A      G+++   V+ RE+ +  +  +A S+I+ H HPS +  PS  DI
Sbjct: 50  MCLNTRNNVVAVHRCHVGSLNASLVHPREVFKSAILNNAASVIVAHQHPSDDITPSKEDI 109

Query: 61  NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97
           N+T+ ++     L I V DH+++   + F S K    I
Sbjct: 110 NVTKRLVEAGKLLGIEVLDHLVVNSDNGFTSLKERGYI 147


>gi|218245274|ref|YP_002370645.1| DNA repair protein RadC [Cyanothece sp. PCC 8801]
 gi|257058307|ref|YP_003136195.1| DNA repair protein RadC [Cyanothece sp. PCC 8802]
 gi|218165752|gb|ACK64489.1| DNA repair protein RadC [Cyanothece sp. PCC 8801]
 gi|256588473|gb|ACU99359.1| DNA repair protein RadC [Cyanothece sp. PCC 8802]
          Length = 243

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 57/93 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N LI  ++ + GT     V+ R+I +  L+  AT +I+ HNHPSG+ +PS  D+
Sbjct: 139 VFLDVKNRLIGTKIITIGTATETLVHPRDIFRETLKQGATRLIVAHNHPSGSLDPSSEDL 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           ++T+ ++   N L I + DH+I+G+  + S + 
Sbjct: 199 DLTEQLLEGANYLGIPLLDHLILGEGDYQSLRQ 231


>gi|308272571|emb|CBX29175.1| DNA repair protein radC homolog [uncultured Desulfobacterium sp.]
          Length = 233

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  + +I     + GT++H    +REI+   L+   TSII +HNHPS N  PS  D 
Sbjct: 136 VYLNSDSRIIDISDAAIGTVNHAIPIVREIIHAALQKFTTSIICIHNHPSANLTPSHEDK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
                +      ++I V DHIIIG D++ SF    ++
Sbjct: 196 KFAAKLTDAGKLMDIKVLDHIIIGDDSYYSFAEHGLM 232


>gi|160885503|ref|ZP_02066506.1| hypothetical protein BACOVA_03503 [Bacteroides ovatus ATCC 8483]
 gi|260172176|ref|ZP_05758588.1| putative DNA repair protein [Bacteroides sp. D2]
 gi|293371841|ref|ZP_06618250.1| DNA repair protein RadC [Bacteroides ovatus SD CMC 3f]
 gi|299147358|ref|ZP_07040423.1| DNA repair protein RadC [Bacteroides sp. 3_1_23]
 gi|315920484|ref|ZP_07916724.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156109125|gb|EDO10870.1| hypothetical protein BACOVA_03503 [Bacteroides ovatus ATCC 8483]
 gi|292633185|gb|EFF51757.1| DNA repair protein RadC [Bacteroides ovatus SD CMC 3f]
 gi|298514636|gb|EFI38520.1| DNA repair protein RadC [Bacteroides sp. 3_1_23]
 gi|313694359|gb|EFS31194.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 231

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   LI     S G ID     +R I++  L   AT I +VHNHPSGN +PS  D 
Sbjct: 135 LLLNQATKLIDKVRISTGGIDGTYTDVRTILREALLQRATQIAVVHNHPSGNIHPSQPDR 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T++I      +NI + DH+I+ +D F SF    ++
Sbjct: 195 SLTEHIHKAAETMNIRLIDHVIVCEDGFFSFADEGLL 231


>gi|327405127|ref|YP_004345965.1| DNA repair protein RadC [Fluviicola taffensis DSM 16823]
 gi|327320635|gb|AEA45127.1| DNA repair protein RadC [Fluviicola taffensis DSM 16823]
          Length = 230

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +  S G I    V  + I +  ++LSA  IIL HNHPSG   PSD D 
Sbjct: 134 LYLNNSNEILQVKQLSIGGITGTFVDPKIIFKHGIDLSACGIILAHNHPSGILIPSDQDK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      + + V DH+II  + + SF    ++
Sbjct: 194 RLTKRIQQFGMLIEMNVIDHLIITDNGYFSFADQNLL 230


>gi|167764281|ref|ZP_02436408.1| hypothetical protein BACSTE_02666 [Bacteroides stercoris ATCC
           43183]
 gi|167698397|gb|EDS14976.1| hypothetical protein BACSTE_02666 [Bacteroides stercoris ATCC
           43183]
          Length = 237

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ + +I     SRG ID     +R I++  L   AT I L+HNHPSGNP PS  D 
Sbjct: 141 LLLNQASRVIDKVRISRGGIDQTSADVRSILREALLQRATQIALIHNHPSGNPQPSTNDR 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I+     +NI + DH+I+    + SF    ++
Sbjct: 201 QLTQLILKGAQTMNIRLIDHVIVTDGRYYSFTDEGVL 237


>gi|116493037|ref|YP_804772.1| DNA repair protein [Pediococcus pentosaceus ATCC 25745]
 gi|116103187|gb|ABJ68330.1| DNA replication and repair protein RadC [Pediococcus pentosaceus
           ATCC 25745]
          Length = 219

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +  + V  +G ++   V+ REI+   L +SA S +L+HNHPSGN  PS  D+
Sbjct: 123 LCLDTKNQIKREIVVFKGGLNSAEVHPREIMVEVLRVSANSFVLIHNHPSGNIEPSTNDL 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +    + + I + DH+I+G  ++ S    R I
Sbjct: 183 AFTKKMKKVGDLMGIRLIDHLIVGDQSYWSAAEKRFI 219


>gi|305665155|ref|YP_003861442.1| putative DNA repair protein [Maribacter sp. HTCC2170]
 gi|88709907|gb|EAR02139.1| putative DNA repair protein [Maribacter sp. HTCC2170]
          Length = 232

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I     S+G I    V +R ++++ LEL A  ++L HNHPSG   PS+AD 
Sbjct: 136 VYLNNSNKVIHTSQLSKGGITGTLVDVRLVMKKALELGAIGLVLAHNHPSGGLKPSNADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      L++ V DH+II ++ + SF    I+
Sbjct: 196 QITSKLKNAALALDLKVLDHLIITQNDYFSFADESIL 232


>gi|146302122|ref|YP_001196713.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101]
 gi|146156540|gb|ABQ07394.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101]
          Length = 156

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L + N ++     S G I    V +R +    L+ +A  II+ HNHPSG  +PS+AD 
Sbjct: 60  LLLSQSNRVLGIYEVSSGGISGTLVDMRMLFAAALKAAAVGIIITHNHPSGKTSPSEADR 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           NMT+ I      L+I + DH+I+  + + SF     +
Sbjct: 120 NMTRKIREAGKLLDIPLLDHLIVTPETYYSFADEGAL 156


>gi|239637541|ref|ZP_04678513.1| DNA repair protein RadC [Staphylococcus warneri L37603]
 gi|239596759|gb|EEQ79284.1| DNA repair protein RadC [Staphylococcus warneri L37603]
          Length = 227

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+I  +    GT++   ++ REI    ++ S  S+I+VHNHPSG+  PS+ DI
Sbjct: 128 LLLNSKNIVIKQQCVFVGTLNSSIIHPREIFNVAIKESCNSMIVVHNHPSGDVTPSEEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           N T  +   +  L I V DHIIIG + F S      
Sbjct: 188 NTTIRLRDCVMILGINVLDHIIIGDNQFTSLVECGY 223


>gi|295135718|ref|YP_003586394.1| DNA repair protein RadC [Zunongwangia profunda SM-A87]
 gi|294983733|gb|ADF54198.1| DNA repair protein RadC [Zunongwangia profunda SM-A87]
          Length = 232

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+  N +I     S+G I    V +R  +++ LEL A +IIL HNHPSG   PS AD 
Sbjct: 136 IYLNNSNKVIDKLQLSKGGITGTLVDVRLTMKKALELGAVAIILAHNHPSGTLKPSIADK 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+TQ +      L+I V DHII+ + ++ SF    I+
Sbjct: 196 NLTQKLKIASESLDIKVLDHIIVTEMSYFSFADEAIL 232


>gi|255319392|ref|ZP_05360608.1| DNA repair protein RadC [Acinetobacter radioresistens SK82]
 gi|262380856|ref|ZP_06074007.1| DNA repair protein radC [Acinetobacter radioresistens SH164]
 gi|255303528|gb|EET82729.1| DNA repair protein RadC [Acinetobacter radioresistens SK82]
 gi|262297491|gb|EEY85409.1| DNA repair protein radC [Acinetobacter radioresistens SH164]
          Length = 241

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 49/96 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     ++ +    G+++H  V I +I++  L+  A  +++ HNHP G   PS AD+
Sbjct: 131 LCLDNDLRKLSFKKLFFGSLNHCAVSINQILRYALKQHACHLVIAHNHPFGQAQPSPADL 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +      + I++ DH II  +   SF    +
Sbjct: 191 ELTRQLSQACKLVEIVLLDHFIISPECSFSFAEQGL 226


>gi|94498367|ref|ZP_01304925.1| hypothetical protein SKA58_11765 [Sphingomonas sp. SKA58]
 gi|94422122|gb|EAT07165.1| hypothetical protein SKA58_11765 [Sphingomonas sp. SKA58]
          Length = 231

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 64/97 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N+LI D+    G+ID   +Y RE+++R ++L + ++ILVHNHPSG+P+PS  DI
Sbjct: 135 LHLNSRNMLIRDDHMGDGSIDQAAIYTREVIRRAIDLGSAALILVHNHPSGDPSPSRQDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ II     LNI VHDH+II     VS +   ++
Sbjct: 195 DVTRQIIDAGKRLNISVHDHVIIAGQGHVSLRAKGLL 231


>gi|160902910|ref|YP_001568491.1| DNA repair protein RadC [Petrotoga mobilis SJ95]
 gi|160360554|gb|ABX32168.1| DNA repair protein RadC [Petrotoga mobilis SJ95]
          Length = 222

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/91 (41%), Positives = 58/91 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    +I  +  S GT++    + R+I +  +  +A S ILVHNHPSG+P PS  D 
Sbjct: 123 IFLDSKLHIITIKDISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNHPSGDPTPSMHDR 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ I+ +   L I ++DHIIIGKD++ SF
Sbjct: 183 DITKKIMDSGEILGINMNDHIIIGKDSYFSF 213


>gi|260171158|ref|ZP_05757570.1| putative DNA repair protein [Bacteroides sp. D2]
 gi|315919475|ref|ZP_07915715.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693350|gb|EFS30185.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 150

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N  +   + S+G +    + ++ I+Q  L++ A+ IIL HNHPSGN  PS+ D 
Sbjct: 54  MFLNRANKALGVSLISKGGMAETVMDVKIILQTALKVHASGIILSHNHPSGNLRPSEPDK 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L++ + DHII+ ++++ SF    +I
Sbjct: 114 QITSKIKEACKVLDLHLFDHIILTEESYYSFADEGLI 150


>gi|99034812|ref|ZP_01314730.1| hypothetical protein Wendoof_01000450 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 116

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 69/97 (71%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++++K   LIA+++++ GT+D  P+Y+REI++R L + +TSI++ HNHPSG+  PS++DI
Sbjct: 20  IYMNKKYRLIAEDLENIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSGDTQPSNSDI 79

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I + DHIII   ++ SFK  R++
Sbjct: 80  SLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 116


>gi|157363305|ref|YP_001470072.1| DNA repair protein RadC [Thermotoga lettingae TMO]
 gi|157313909|gb|ABV33008.1| DNA repair protein RadC [Thermotoga lettingae TMO]
          Length = 225

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD     +  +  ++GT +    + REI +  +  +ATSII+VHNHPSG+P+PS  D 
Sbjct: 119 ILLDSKLFSVFHKDITQGTNNQTIFHPREIFRIAIRSNATSIIVVHNHPSGDPSPSAEDK 178

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +I+  + L I + DH+I+G++ + SF+  R++
Sbjct: 179 KATEMLISAGDILGIEIIDHLIVGRERYYSFRENRLL 215


>gi|322376781|ref|ZP_08051274.1| DNA repair protein RadC [Streptococcus sp. M334]
 gi|321282588|gb|EFX59595.1| DNA repair protein RadC [Streptococcus sp. M334]
          Length = 226

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   ++  ATS+ILVHNHPSG   PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSRNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +    + + I++ DH+I+   ++ S++  
Sbjct: 189 HVTKLVKEACDLMGIVLLDHLIVSHSSYFSYREK 222


>gi|258647040|ref|ZP_05734509.1| DNA repair protein RadC [Prevotella tannerae ATCC 51259]
 gi|260853150|gb|EEX73019.1| DNA repair protein RadC [Prevotella tannerae ATCC 51259]
          Length = 228

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++   L+++ +  RG +    V +R +  + LE  AT++ + HNHPSGNP PS AD 
Sbjct: 131 MFLNRRLQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPRPSQADD 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      L+I + DHII+    + S++    +
Sbjct: 191 RLTQKVAQAARLLDIRLVDHIIVADKCYYSYQEEGKL 227


>gi|307704752|ref|ZP_07641648.1| DNA repair protein radC [Streptococcus mitis SK597]
 gi|307708771|ref|ZP_07645233.1| DNA repair protein RadC [Streptococcus mitis NCTC 12261]
 gi|307615137|gb|EFN94348.1| DNA repair protein RadC [Streptococcus mitis NCTC 12261]
 gi|307621661|gb|EFO00702.1| DNA repair protein radC [Streptococcus mitis SK597]
          Length = 226

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   ++  ATS+ILVHNHPSG   PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSRNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +    + + I++ DH+I+   ++ S++  
Sbjct: 189 HVTKLVKEACDLMGIVLLDHLIVSHSSYFSYREK 222


>gi|329954654|ref|ZP_08295714.1| DNA repair protein RadC [Bacteroides clarus YIT 12056]
 gi|328527195|gb|EGF54199.1| DNA repair protein RadC [Bacteroides clarus YIT 12056]
          Length = 148

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++   ++     S G +      +R I+Q  L  +AT+IIL HNHPSG   PS  DI
Sbjct: 52  VLLNQAQEVLGYTQISEGGLTETSADVRIILQAALLTNATAIILAHNHPSGKLRPSQQDI 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I V DHII+  D++ SF     +
Sbjct: 112 ALTEQVKKAAEIMRITVIDHIILTDDSYYSFADEGQL 148


>gi|260427275|ref|ZP_05781254.1| DNA repair protein RadC [Citreicella sp. SE45]
 gi|260421767|gb|EEX15018.1| DNA repair protein RadC [Citreicella sp. SE45]
          Length = 139

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/95 (47%), Positives = 66/95 (69%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N LI+DE  + GT+DHVPVY RE+++RCL L+A+++I+VHNH +G+P PS AD+
Sbjct: 43  LYLDRRNRLISDECLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHSAGDPEPSAADL 102

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            MT+ +      L +I+HDHII G     S +   
Sbjct: 103 EMTKEVQIACASLGVILHDHIITGAGRETSLRARG 137


>gi|110637561|ref|YP_677768.1| DNA repair protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110280242|gb|ABG58428.1| DNA replication and repair protein RadC [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 233

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N +      S G +       + I +  LE  A+SIILVHNHPSGN  PS+AD 
Sbjct: 137 LLLNRANRIEKKIRISTGGVSGTVADPKLIYKYALENLASSIILVHNHPSGNTKPSEADY 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      L   V DH+II    + SF     I
Sbjct: 197 SLTKKLCEAGTFLETPVLDHVIICNHTWYSFADEGKI 233


>gi|213019650|ref|ZP_03335455.1| DNA repair protein RadC [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212994691|gb|EEB55334.1| DNA repair protein RadC [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 118

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 67/97 (69%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++++K   LIA+++Q+ GT+D  P+Y+REI++R L + +TSI++ HNHPSG+  PS +D+
Sbjct: 20  IYMNKRYRLIAEDLQNFGTVDQTPIYVREIIRRALLIGSTSIVISHNHPSGDIQPSSSDM 79

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I + DHIII   ++ SFK  R++
Sbjct: 80  FLTRQLAEACKSIGIELIDHIIITFSSYFSFKENRLL 116


>gi|206972327|ref|ZP_03233273.1| DNA repair protein radc [Bacillus cereus AH1134]
 gi|206732652|gb|EDZ49828.1| DNA repair protein radc [Bacillus cereus AH1134]
          Length = 146

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA      G I+   V+ RE  + CL  +A S+I  HNHPS +  PSD D+
Sbjct: 50  ICLNTKNEVIAVHRIHVGAINASIVHPREAYKVCLLYNACSVIFFHNHPSYDTTPSDEDL 109

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I + DHII+    F S K    +
Sbjct: 110 EVTRRLKEAGQILGIEMLDHIIVSPKGFTSLKVKGKL 146


>gi|312128297|ref|YP_003993171.1| DNA repair protein radc [Caldicellulosiruptor hydrothermalis 108]
 gi|311778316|gb|ADQ07802.1| DNA repair protein RadC [Caldicellulosiruptor hydrothermalis 108]
          Length = 230

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    +I       GT+    VY R++V+  +  +A+S+IL HNHP G+  PS  DI
Sbjct: 129 ICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECAIRYNASSVILAHNHPGGSVRPSMDDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             TQ I+  L+ + + V+DH I+ KD + SF    ++
Sbjct: 189 KTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 225


>gi|53711774|ref|YP_097766.1| putative DNA repair protein [Bacteroides fragilis YCH46]
 gi|52214639|dbj|BAD47232.1| putative DNA repair protein [Bacteroides fragilis YCH46]
          Length = 230

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   +I     S G ID     +R I++  L   AT I L+HNHPSGN  PS  D 
Sbjct: 134 LLLNQACKVINKLRISTGGIDGTYADVRTILREALIGRATQIALIHNHPSGNAKPSQEDK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      +NI + DH+I+    F SF    +I
Sbjct: 194 RLTGAIQKASQTMNITLVDHVIVCDGCFYSFADEGLI 230


>gi|330427436|gb|AEC18770.1| DNA repair protein RadC [Pusillimonas sp. T7-7]
          Length = 180

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 54/96 (56%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L+    LI      RGT+    VY RE+V+  L  +A ++I+ HNHPSG   PS+AD  
Sbjct: 85  MLNAQYELIEYAEPFRGTLTQASVYPREVVKMALHANAAAVIIGHNHPSGALQPSEADKA 144

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T ++  +L  +++ + DHI++  +  +SF    ++
Sbjct: 145 LTAHLRQSLQLVDVSLLDHILVANNQTLSFAERGLL 180


>gi|255009935|ref|ZP_05282061.1| putative DNA repair protein [Bacteroides fragilis 3_1_12]
 gi|313147722|ref|ZP_07809915.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136489|gb|EFR53849.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 231

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   +I+    S G ID     +R I++  L   AT I L+HNHPSGN  PS  D 
Sbjct: 135 LLLNQACKVISKLRISTGGIDGTYADVRTILREALIGRATQIALIHNHPSGNAKPSQEDK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      +NI + DHII+    F SF    +I
Sbjct: 195 RLTAAIQKASQTMNITLTDHIIVCDGCFYSFADEGLI 231


>gi|302670846|ref|YP_003830806.1| DNA repair protein RadC [Butyrivibrio proteoclasticus B316]
 gi|302395319|gb|ADL34224.1| DNA repair protein RadC [Butyrivibrio proteoclasticus B316]
          Length = 237

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    LI + + S GT++   +  R++  R L+  A++IIL+HNHP+G+P+PS AD+
Sbjct: 139 LCLDNKLNLIEECLLSIGTVNSASLSPRDVFMRALKCGASNIILLHNHPTGDPSPSKADV 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I  +   L+I + DHIIIG  ++ S +   ++
Sbjct: 199 IVTNKISESGIMLDIRLQDHIIIGDRSYCSLREKDLL 235


>gi|29345488|ref|NP_808991.1| putative DNA repair protein [Bacteroides thetaiotaomicron VPI-5482]
 gi|29337380|gb|AAO75185.1| putative DNA repair protein [Bacteroides thetaiotaomicron VPI-5482]
 gi|295087240|emb|CBK68763.1| DNA repair proteins [Bacteroides xylanisolvens XB1A]
          Length = 150

 Score =  112 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N  +   + S+G +    + ++ I+Q  L++ A+ I+L HNHPSGN  PS+ D 
Sbjct: 54  MFLNRANKALGISLISKGGMAETVMDVKIILQTALKVHASGIVLSHNHPSGNLRPSEPDK 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L++ + DHII+ ++++ SF    ++
Sbjct: 114 KITTKINEACKVLDLHLLDHIILTEESYYSFADEGLL 150


>gi|317474392|ref|ZP_07933666.1| DNA repair protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316909073|gb|EFV30753.1| DNA repair protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 148

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++   ++     S G I      +R I+Q  L  +AT+IIL HNHPSG   PS  DI
Sbjct: 52  VLLNQAQEVLGYTQISEGGITETSADVRIILQAALLTNATAIILAHNHPSGKLRPSRQDI 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I V DHII+  D++ SF     +
Sbjct: 112 ALTEQVKKAAEIMRITVIDHIILTDDSYYSFADEGQL 148


>gi|257880671|ref|ZP_05660324.1| DNA repair protein RadC [Enterococcus faecium 1,230,933]
 gi|257814899|gb|EEV43657.1| DNA repair protein RadC [Enterococcus faecium 1,230,933]
          Length = 147

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 1/96 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N ++A      G+++   V+ RE+ +  +  +A SII+ H HPSG+  PS  DI
Sbjct: 50  MCLNTKNHVVAVHRCHVGSLNASIVHPREVFKSAILNNAASIIVAHQHPSGDITPSMEDI 109

Query: 61  NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLR 95
           N+T+ ++     L I V DH+++ G   F S K   
Sbjct: 110 NVTKRLVEAGKLLGIEVFDHLVVNGDSKFTSLKEKG 145


>gi|307709460|ref|ZP_07645917.1| DNA repair protein radC [Streptococcus mitis SK564]
 gi|307619774|gb|EFN98893.1| DNA repair protein radC [Streptococcus mitis SK564]
          Length = 226

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   ++  ATSIILVHNHPSG   PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSIILVHNHPSGAVAPSRNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +    + + I++ DH+I+   ++ S++  
Sbjct: 189 HVTKLVKEACDLMGIVLLDHLIVSYSSYFSYREK 222


>gi|291514569|emb|CBK63779.1| DNA repair protein radc [Alistipes shahii WAL 8301]
          Length = 212

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I     S+G +    V  R IV+R LEL AT +ILVHNHPSG P  S  D 
Sbjct: 114 VYLTSSNRVIERYRISQGGVTGTVVDHRLIVKRALELLATQLILVHNHPSGTPEASGQDK 173

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +       +I + DHIII +D   SF    ++
Sbjct: 174 TLTERVARAAALFDIRLLDHIIIARDGDFSFLREGLM 210


>gi|298481711|ref|ZP_06999902.1| DNA repair protein RadC [Bacteroides sp. D22]
 gi|298272252|gb|EFI13822.1| DNA repair protein RadC [Bacteroides sp. D22]
          Length = 231

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   LI     S G ID     +R I++  L   AT I +VHNHPSGN  PS  D 
Sbjct: 135 LLLNQATKLIDKVRISTGGIDGTYTDVRTILREALLQRATQIAVVHNHPSGNIRPSQPDK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++I    + +NI + DH+++ +D F SF    ++
Sbjct: 195 TLTEHIRKAADTMNIHLIDHVVVCEDGFFSFADEGLL 231


>gi|306825148|ref|ZP_07458490.1| DNA repair protein RadC [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432584|gb|EFM35558.1| DNA repair protein RadC [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 197

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 50/94 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   L+  ATS+ILVHNHPSG  +PS  D 
Sbjct: 100 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYALKNMATSVILVHNHPSGAVSPSRNDD 159

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + I+  DH+I+    + S++  
Sbjct: 160 HVTKLVKEACELMGIVFLDHLIVSHSDYFSYREK 193


>gi|281357981|ref|ZP_06244466.1| DNA repair protein RadC [Victivallis vadensis ATCC BAA-548]
 gi|281315639|gb|EFA99667.1| DNA repair protein RadC [Victivallis vadensis ATCC BAA-548]
          Length = 227

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N L+  +V   GT+D   VY RE++++ +   AT++IL HNHP+G   PS ADI
Sbjct: 132 LFLNAQNHLLCFDVIP-GTVDRATVYAREVLEKAINTKATAVILAHNHPTGICEPSPADI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L P+ I++HDHII+    + SF   R++
Sbjct: 191 KLTNTIRQVLQPVGILLHDHIIVAPSCYFSFASRRML 227


>gi|289168032|ref|YP_003446301.1| DNA repair protein RadC [Streptococcus mitis B6]
 gi|288907599|emb|CBJ22436.1| DNA repair protein RadC [Streptococcus mitis B6]
          Length = 226

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   ++  ATS+ILVHNHPSG   PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSRNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +    + + I++ DH+I+    + S++  
Sbjct: 189 HVTKLVKEACDLMGIVLLDHLIVSHSNYFSYREK 222


>gi|255692445|ref|ZP_05416120.1| DNA repair protein RadC [Bacteroides finegoldii DSM 17565]
 gi|260621913|gb|EEX44784.1| DNA repair protein RadC [Bacteroides finegoldii DSM 17565]
          Length = 231

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   LI     S G ID     +R I++  L   AT I +VHNHPSGN +PS  D 
Sbjct: 135 LLLNQATKLIDKVRISTGGIDGTYTDVRMILREALLQRATQIAVVHNHPSGNIHPSQPDK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++I    + +NI + DH+I+ +  F SF    ++
Sbjct: 195 ILTEHIRKAADTMNIRLIDHVIVCESQFYSFADEGLL 231


>gi|196250833|ref|ZP_03149519.1| DNA repair protein RadC [Geobacillus sp. G11MC16]
 gi|196209671|gb|EDY04444.1| DNA repair protein RadC [Geobacillus sp. G11MC16]
          Length = 146

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N ++A      G+++   V+ RE+ +  +  ++ SII+ H HPSG+  PS  D+
Sbjct: 48  MCLNTKNEVVAVHRCHIGSLNASIVHPREVFKAAILNNSASIIVAHQHPSGDVTPSREDV 107

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRI 96
            MT+ +      L I V DH++I  K  + S K    
Sbjct: 108 EMTKRLAEAGRILGIEVLDHLVINYKAEYTSLKERGF 144


>gi|302338979|ref|YP_003804185.1| DNA repair protein RadC [Spirochaeta smaragdinae DSM 11293]
 gi|301636164|gb|ADK81591.1| DNA repair protein RadC [Spirochaeta smaragdinae DSM 11293]
          Length = 127

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 31/93 (33%), Positives = 45/93 (48%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  + +    + + G  +   V+ RE+    +  +A +II+ HNHPSG   PS  D  +
Sbjct: 33  LDGAHQVNGQHIVTIGLANRTLVHPREVFYPAIVDNAVAIIVAHNHPSGQILPSPEDEQI 92

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           TQ +      L I V DHIIIG   + SF    
Sbjct: 93  TQRLHDAGEILGIPVLDHIIIGNGRYYSFAEAG 125


>gi|213157928|ref|YP_002320726.1| DNA repair protein RadC [Acinetobacter baumannii AB0057]
 gi|215482288|ref|YP_002324470.1| DNA repair protein radC [Acinetobacter baumannii AB307-0294]
 gi|294839343|ref|ZP_06784026.1| DNA repair protein RadC [Acinetobacter sp. 6013113]
 gi|294857023|ref|ZP_06794792.1| DNA repair protein RadC [Acinetobacter sp. 6013150]
 gi|301347242|ref|ZP_07227983.1| DNA repair protein RadC [Acinetobacter baumannii AB056]
 gi|301511792|ref|ZP_07237029.1| DNA repair protein RadC [Acinetobacter baumannii AB058]
 gi|301595294|ref|ZP_07240302.1| DNA repair protein RadC [Acinetobacter baumannii AB059]
 gi|172044077|sp|A3M8S9|Y2918_ACIBT RecName: Full=UPF0758 protein A1S_2918
 gi|226736613|sp|B7GWK9|Y545_ACIB3 RecName: Full=UPF0758 protein ABBFA_000545
 gi|226736614|sp|B7I981|Y3420_ACIB5 RecName: Full=UPF0758 protein AB57_3420
 gi|193078350|gb|ABO13323.2| DNA repair protein [Acinetobacter baumannii ATCC 17978]
 gi|213057088|gb|ACJ41990.1| DNA repair protein RadC [Acinetobacter baumannii AB0057]
 gi|213987913|gb|ACJ58212.1| DNA repair protein radC [Acinetobacter baumannii AB307-0294]
          Length = 235

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G++ H  V + + ++  L+  A  +++ HNHP G+P PS  DI
Sbjct: 131 LCLDAELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSPQPSPEDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I + DH II  +   SF   +++
Sbjct: 191 KLTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 227


>gi|308270537|emb|CBX27149.1| DNA repair protein radC homolog [uncultured Desulfobacterium sp.]
          Length = 192

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I   + S GT+    V+ RE+++  +  ++ ++IL HNHPS +P PS  D+
Sbjct: 86  ILLNAKNGIIGLNIVSTGTLSSATVHPREVLKPAIIANSAAMILCHNHPSNDPTPSQEDL 145

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG--KDAFVSFKGLRII 97
            +T+ I+     + I VH+H+II    D + SF    +I
Sbjct: 146 AITRIIVQAAKIIGIHVHEHLIINMENDRYYSFADNGLI 184


>gi|315038037|ref|YP_004031605.1| DNA repair protein RadC [Lactobacillus amylovorus GRL 1112]
 gi|312276170|gb|ADQ58810.1| DNA repair protein RadC [Lactobacillus amylovorus GRL 1112]
          Length = 207

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L++D  + +IA++   +GT++    + REI +  +    + I + HNHPSG   PS +D 
Sbjct: 111 LYIDNASHIIAEKKLFQGTLNRSVAHPREIFRWAVIYGCSGIFIAHNHPSGKLMPSSSDF 170

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++      + I   DH I+G+  ++S +  +++
Sbjct: 171 ELTEDLCQVAKMMKIDFLDHFIVGQGHYLSMREEKLV 207


>gi|195978173|ref|YP_002123417.1| DNA repair protein RadC [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|229485563|sp|B4U337|Y1052_STREM RecName: Full=UPF0758 protein Sez_1052
 gi|195974878|gb|ACG62404.1| DNA repair protein RadC-like [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 225

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I ++    GT+       REI+    +  ATS+I+VHNHPSG   PS  D 
Sbjct: 128 IYLDSQNKIIEEKTIFIGTVRKSIAEPREILYYACKNMATSLIVVHNHPSGLTKPSANDY 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           + T+ I  + + L +I  DHII+ K  + SF+  
Sbjct: 188 HFTEKIKRSCDYLGLICLDHIIVSKHGYYSFREK 221


>gi|224536395|ref|ZP_03676934.1| hypothetical protein BACCELL_01269 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521987|gb|EEF91092.1| hypothetical protein BACCELL_01269 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 228

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ + +I     SRG ID     +R I++  L   AT I L+HNHPSG+P PS  D 
Sbjct: 132 LLLNQASRVIDKSRISRGGIDQTTADVRSILREALIQRATQIALIHNHPSGSPRPSTDDQ 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      +NI + DH+I+    + SF    +I
Sbjct: 192 RLTQLVQKGAQTMNIRLIDHVIVTDGKYYSFNDEGMI 228


>gi|282901217|ref|ZP_06309146.1| DNA repair protein RadC [Cylindrospermopsis raciborskii CS-505]
 gi|281193917|gb|EFA68885.1| DNA repair protein RadC [Cylindrospermopsis raciborskii CS-505]
          Length = 243

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/93 (34%), Positives = 51/93 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N  +  ++ + GT        R+I +  +   AT +I+ HNHPSGN  PS ADI
Sbjct: 139 LLLDVKNRFLGTKIITIGTATETLASPRDIFREVIRHGATRMIIAHNHPSGNLEPSQADI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           ++T+ +++    LNI + DH+I+G     S + 
Sbjct: 199 DLTRQLLSGAQLLNIPILDHLILGNGNHQSLRE 231


>gi|71903481|ref|YP_280284.1| DNA repair protein RadC [Streptococcus pyogenes MGAS6180]
 gi|123639877|sp|Q48TN1|Y816_STRPM RecName: Full=UPF0758 protein M28_Spy0816
 gi|71802576|gb|AAX71929.1| DNA repair protein [Streptococcus pyogenes MGAS6180]
          Length = 226

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 49/94 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +  ++    GT+       REI+    +  ATS+I++HNHPSGN  PS  D 
Sbjct: 129 LYLDNQNRIFEEKTIFIGTVRRSLAEPREILYYACKNMATSLIVIHNHPSGNIEPSSNDY 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ I  +   L II  DHII+    + SF+  
Sbjct: 189 CFTEKIKRSCEDLGIICLDHIIVSYKDYYSFREK 222


>gi|260557106|ref|ZP_05829322.1| DNA repair protein radC [Acinetobacter baumannii ATCC 19606]
 gi|260409212|gb|EEX02514.1| DNA repair protein radC [Acinetobacter baumannii ATCC 19606]
          Length = 235

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G++ H  V + + ++  L+  A  +++ HNHP G+P PS  DI
Sbjct: 131 LCLDAELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSPQPSPEDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I + DH II  +   SF   +++
Sbjct: 191 KLTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 227


>gi|126642941|ref|YP_001085925.1| DNA repair protein [Acinetobacter baumannii ATCC 17978]
 gi|169794701|ref|YP_001712494.1| DNA repair protein, associated with replication forks
           [Acinetobacter baumannii AYE]
 gi|169147628|emb|CAM85491.1| DNA repair protein, associated with replication forks
           [Acinetobacter baumannii AYE]
          Length = 250

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G++ H  V + + ++  L+  A  +++ HNHP G+P PS  DI
Sbjct: 146 LCLDAELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSPQPSPEDI 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I + DH II  +   SF   +++
Sbjct: 206 KLTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 242


>gi|225868493|ref|YP_002744441.1| DNA repair protein RadC [Streptococcus equi subsp. zooepidemicus]
 gi|259551902|sp|C0MEY7|Y914_STRS7 RecName: Full=UPF0758 protein SZO_09140
 gi|225701769|emb|CAW99162.1| DNA repair protein RadC [Streptococcus equi subsp. zooepidemicus]
          Length = 225

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I ++    GT+       REI+    +  ATS+I+VHNHPSG   PS  D 
Sbjct: 128 IYLDSQNKIIEEKTIFIGTVRKSIAEPREILYYACKNMATSLIVVHNHPSGLTKPSANDY 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           + T+ I  + + L +I  DHII+ K  + SF+  
Sbjct: 188 HFTEKIKRSCDYLGLICLDHIIVSKHGYYSFREK 221


>gi|220916229|ref|YP_002491533.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954083|gb|ACL64467.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 223

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 47/95 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    LI     S G++   PV  R++++  L + A  +I  HNHPSG+ +PS  D 
Sbjct: 125 VLLDVRCRLIKTAKISEGSLTQCPVAPRDVLREALRVGAHGVIFAHNHPSGSADPSPEDH 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           ++T+ +      + +   DH+I+    + SF    
Sbjct: 185 DLTERLRAASELVGLTARDHLILASGGYYSFVEAG 219


>gi|187251767|ref|YP_001876249.1| DNA repair protein RadC [Elusimicrobium minutum Pei191]
 gi|186971927|gb|ACC98912.1| DNA repair protein RadC [Elusimicrobium minutum Pei191]
          Length = 228

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  EV S G ID   +  R++V+  L+  A  I+LVHNHPSG+P+PS  DI
Sbjct: 132 IYLTVRNTVIGTEVLSVGAIDRASISPRKVVEGALKAKAVGIVLVHNHPSGDPSPSMEDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + T+ +      L I+VHDHII+ +  + S +    I
Sbjct: 192 SFTKEVAQAARILGIMVHDHIIVVRGGYYSMRAKSQI 228


>gi|329956074|ref|ZP_08296845.1| putative DNA repair protein RadC [Bacteroides clarus YIT 12056]
 gi|328524833|gb|EGF51887.1| putative DNA repair protein RadC [Bacteroides clarus YIT 12056]
          Length = 239

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ + +I     SRG ID     +R I++  L   AT I L+HNHPSGNP+PS  D 
Sbjct: 143 LLLNQASRVIDKVRISRGGIDQTSADVRSILREALLQRATQIALIHNHPSGNPHPSMNDR 202

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I      +NI + DH+I+    + SF     +
Sbjct: 203 RLTQFIQKGAQTMNIRLIDHVIVTDGRYYSFNDEGAL 239


>gi|311748301|ref|ZP_07722086.1| DNA repair protein RadC [Algoriphagus sp. PR1]
 gi|126576798|gb|EAZ81046.1| DNA repair protein RadC [Algoriphagus sp. PR1]
          Length = 231

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L + N +I   + S+G      V  + I +  L+  A S+ILVHNHPSGN  PS+ D 
Sbjct: 135 VLLSRSNQVIKKHLISKGGTAGTVVDSKLIFKSALDYLAQSMILVHNHPSGNLKPSEQDK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L++ V DH+I     + SF    +I
Sbjct: 195 RLTERLVKIGRELDLPVLDHVIFTDLGYFSFADEGLI 231


>gi|307706681|ref|ZP_07643487.1| DNA repair protein radC [Streptococcus mitis SK321]
 gi|307617925|gb|EFN97086.1| DNA repair protein radC [Streptococcus mitis SK321]
          Length = 226

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   ++  ATS+ILVHNHPSG   PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSLILVHNHPSGAVAPSRNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +    + + I++ DH+I+   ++ S++  
Sbjct: 189 HVTKLVKEACDLMGIVLLDHLIVSHSSYFSYREK 222


>gi|113868987|ref|YP_727476.1| DNA repair protein RadC [Ralstonia eutropha H16]
 gi|123133661|sp|Q0K7B3|Y3033_RALEH RecName: Full=UPF0758 protein H16_A3033
 gi|113527763|emb|CAJ94108.1| DNA repair protein [Ralstonia eutropha H16]
          Length = 228

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/93 (36%), Positives = 51/93 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N ++A E   RGT+    VY RE+ ++ L  +A  II+ HNHP G   PS +DI
Sbjct: 128 LFLDPRNRMVASEEMFRGTLTRTAVYPREVARQALVHNAAGIIVAHNHPRGTTAPSQSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T  +  TL+ +++ + DH I+      S   
Sbjct: 188 RLTHELARTLDLIDVRLLDHFIVAGQEIRSLAD 220


>gi|237722533|ref|ZP_04553014.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229448343|gb|EEO54134.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 150

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N  +   + S+G +    + ++ I+Q  L++ A+ IIL HNHPSGN  PS+ D 
Sbjct: 54  MFLNRANKALGVSLISKGGMAETVMDVKIILQTALKVHASGIILSHNHPSGNLKPSEPDK 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L++++ DHII+  + + SF    +I
Sbjct: 114 QITSKIKEACKCLDLVLLDHIILTDEHYYSFTDEGLI 150


>gi|73667265|ref|YP_303281.1| DNA repair protein RadC [Ehrlichia canis str. Jake]
 gi|72394406|gb|AAZ68683.1| DNA repair protein RadC [Ehrlichia canis str. Jake]
          Length = 230

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 63/97 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+    L+ADE Q  GT++  P+YIRE++++ L L ATSII+ HNHPSG+  PS ADI
Sbjct: 134 LYLNTKYKLLADETQDVGTVNQTPLYIREVIKKSLSLGATSIIIAHNHPSGDARPSKADI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +  T N + I + DH+I+  +   SFK   ++
Sbjct: 194 EITNQLAITCNNIGITLIDHVIVTSNDHYSFKTHNLL 230


>gi|297569910|ref|YP_003691254.1| DNA repair protein RadC [Desulfurivibrio alkaliphilus AHT2]
 gi|296925825|gb|ADH86635.1| DNA repair protein RadC [Desulfurivibrio alkaliphilus AHT2]
          Length = 246

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    ++A E  + GT+    V+ RE+V+  +  +A ++IL HNHPSGN NPS+ D 
Sbjct: 134 ILLDASYGILALEEIATGTLTAASVHPRELVKTAMAHNAAAVILAHNHPSGNTNPSEQDR 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
            +T+++   L    I + DH ++G      SF    ++
Sbjct: 194 RLTRHLYLALALCEIQLLDHCVVGADQRPYSFADHGLM 231


>gi|237715339|ref|ZP_04545820.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|237719692|ref|ZP_04550173.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|262405180|ref|ZP_06081730.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294645172|ref|ZP_06722895.1| DNA repair protein RadC [Bacteroides ovatus SD CC 2a]
 gi|294807027|ref|ZP_06765846.1| DNA repair protein RadC [Bacteroides xylanisolvens SD CC 1b]
 gi|229444648|gb|EEO50439.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229450961|gb|EEO56752.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|262356055|gb|EEZ05145.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292639503|gb|EFF57798.1| DNA repair protein RadC [Bacteroides ovatus SD CC 2a]
 gi|294445726|gb|EFG14374.1| DNA repair protein RadC [Bacteroides xylanisolvens SD CC 1b]
 gi|295086480|emb|CBK68003.1| DNA repair protein radc [Bacteroides xylanisolvens XB1A]
          Length = 231

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   LI     S G ID     +R I++  L   AT I +VHNHPSGN  PS  D 
Sbjct: 135 LLLNQATKLIDKVRISTGGIDGTYTDVRTILREALLQRATQIAVVHNHPSGNIRPSQPDK 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T++I    + +NI + DH+++ +D F SF    ++
Sbjct: 195 TLTEHIRKAADTMNIHLIDHVVVCEDGFFSFADEGLL 231


>gi|325956489|ref|YP_004291901.1| DNA repair protein RadC [Lactobacillus acidophilus 30SC]
 gi|325333054|gb|ADZ06962.1| DNA repair protein RadC [Lactobacillus acidophilus 30SC]
 gi|327183317|gb|AEA31764.1| DNA repair protein RadC [Lactobacillus amylovorus GRL 1118]
          Length = 207

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L++D  + +IA++   +GT++    + REI +  +    + I + HNHPSG   PS +D 
Sbjct: 111 LYIDNASHIIAEKKLFQGTLNRSVAHPREIFRWAVIYGCSGIFIAHNHPSGKLMPSSSDF 170

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++      + I   DH I+G+  ++S +  +++
Sbjct: 171 ELTEDLCQVAKMMKIDFLDHFIVGQGHYLSMREEKLV 207


>gi|194290593|ref|YP_002006500.1| DNA repair protein radc [Cupriavidus taiwanensis LMG 19424]
 gi|238692771|sp|B3R6F7|Y2508_CUPTR RecName: Full=UPF0758 protein RALTA_A2508
 gi|193224428|emb|CAQ70439.1| DNA repair protein radC homolog, associated with replication fork
           [Cupriavidus taiwanensis LMG 19424]
          Length = 228

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/93 (36%), Positives = 53/93 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N ++A E   RGT+    VY RE+ ++ L  +A  II+ HNHP G   PS +DI
Sbjct: 128 LFLDPGNRMVASEELFRGTLTRTSVYPREVARQALAHNAAGIIVAHNHPRGTTAPSQSDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           ++T+ +  TL+ +++ + DH I+      S   
Sbjct: 188 HLTRELARTLDLIDVRLLDHFIVAGHEIRSLAE 220


>gi|146301404|ref|YP_001195995.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101]
 gi|146155822|gb|ABQ06676.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101]
          Length = 154

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+     +     S G I    V +R I    L+ +AT+I++ HNHPSGN +PS+AD 
Sbjct: 58  LFLNHSFKALGLYEMSSGGITGTIVDLRMIFSAALKANATNIMITHNHPSGNTSPSEADK 117

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +MT  I      L+I + DH+II  + + SF     +
Sbjct: 118 HMTAKIRQAGELLDIKLLDHLIITSETYYSFADEGAL 154


>gi|306829577|ref|ZP_07462767.1| DNA repair protein RadC [Streptococcus mitis ATCC 6249]
 gi|304428663|gb|EFM31753.1| DNA repair protein RadC [Streptococcus mitis ATCC 6249]
          Length = 226

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 49/94 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+        REI+   ++  ATS+ILVHNHPSG   PS  D 
Sbjct: 129 LYLNTQNQIIHQQTIFIGSATRSIAEPREILHYAIKHMATSVILVHNHPSGAVAPSRNDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ++T+ +      + ++  DH+I+    + S++  
Sbjct: 189 HVTKLVKEACELMGLVFLDHLIVSHSDYFSYREK 222


>gi|15081501|ref|NP_150014.1| DNA repair protein RadC [Clostridium perfringens str. 13]
 gi|15076734|dbj|BAB62459.1| DNA repair protein RadC [Clostridium perfringens str. 13]
          Length = 145

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N + +  V S GT++   V+ RE+ +  +  +  SIIL HNHPSG+ +PS  DI
Sbjct: 49  IVLDVKNKINSISVASVGTLNSSIVHPREVFKTAILANGASIILAHNHPSGDTSPSKDDI 108

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  I      + I + DH+I+G + F+S K   II
Sbjct: 109 NITTRIKECGVLMGIELLDHVILGDEKFISLKNEGII 145


>gi|319900227|ref|YP_004159955.1| DNA repair protein RadC [Bacteroides helcogenes P 36-108]
 gi|319415258|gb|ADV42369.1| DNA repair protein RadC [Bacteroides helcogenes P 36-108]
          Length = 228

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L +++ + LI     SRG ID     +R I++  L   AT I L+HNHPSG+P+PS  D 
Sbjct: 132 LLMNQASKLIDKVRISRGGIDQTTADVRTILREALLQRATQIALIHNHPSGSPHPSMEDK 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ I    + +NI + DH+II    + SF    ++
Sbjct: 192 HLTELIKKAAHTMNIRLTDHVIITDGRYYSFCDEGLL 228


>gi|330995877|ref|ZP_08319773.1| DNA repair protein RadC [Paraprevotella xylaniphila YIT 11841]
 gi|329574408|gb|EGG55979.1| DNA repair protein RadC [Paraprevotella xylaniphila YIT 11841]
          Length = 248

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 47/97 (48%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L +++   ++   + S+G +    V IR I++  L   A  I L HNHPSG   PS  D 
Sbjct: 151 LLMNQACRILDKILVSKGGLTETAVDIRLILREALLHRAPVIALCHNHPSGQVRPSMEDD 210

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      +NI + DHII+ +  F S+     +
Sbjct: 211 RLTDRLQKACRMMNIRLLDHIIVAEGGFYSYCEEGKL 247


>gi|28895890|ref|NP_802240.1| DNA repair protein RadC [Streptococcus pyogenes SSI-1]
 gi|73913741|sp|Q8K7J5|Y777_STRP3 RecName: Full=UPF0758 protein SpyM3_0777/SPs0978
 gi|28811140|dbj|BAC64073.1| putative DNA repair protein [Streptococcus pyogenes SSI-1]
          Length = 226

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 49/94 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +  ++    GT+       REI+    +  ATS+I++HNHPSGN  PS  D 
Sbjct: 129 LYLDNQNRIFEEKTIFIGTVRRSLAEPREILYYACKNMATSLIVIHNHPSGNIEPSSNDY 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ I  +   L II  DHII+    + SF+  
Sbjct: 189 CFTEKIKRSCEDLGIICLDHIIVSYKDYYSFREK 222


>gi|146295826|ref|YP_001179597.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145409402|gb|ABP66406.1| DNA repair protein RadC [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 230

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    +I       GT+    VY R++V+  L  +A+S+IL HNHP G+  PS  DI
Sbjct: 129 ICLDTQLNVIHSVPLFEGTVKEAVVYPRKVVECVLRYNASSVILAHNHPGGSVKPSMDDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             TQ I+  L+ + + V+DH I+ K  + SF    ++
Sbjct: 189 KTTQKIVNALSTIGVAVNDHFIVAKGEYYSFAQNGML 225


>gi|146294605|ref|YP_001185029.1| DNA repair protein RadC [Shewanella putrefaciens CN-32]
 gi|145566295|gb|ABP77230.1| DNA repair protein RadC [Shewanella putrefaciens CN-32]
          Length = 168

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + L+  +    GT+D   VY RE+V+  L ++A ++I  HNHPSG   PS AD 
Sbjct: 73  MLLDNQHQLLEFKELFFGTLDAASVYPREVVKAVLAVNAAAVIFAHNHPSGESEPSAADK 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +   L  +++ V DHI++G+   VSF    ++
Sbjct: 133 HITQRLTDALALIDVRVLDHIVVGR-TPVSFAERGLL 168


>gi|284050050|ref|ZP_06380260.1| DNA repair protein RadC [Arthrospira platensis str. Paraca]
 gi|291565709|dbj|BAI87981.1| DNA repair protein RadC [Arthrospira platensis NIES-39]
          Length = 243

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 54/94 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L +D  N L+  ++ + GT      + REI +  L+ +AT +I+ HNHPSGN  PS  DI
Sbjct: 139 LLMDVKNRLLGTKLLTIGTATETLAHPREIFREVLKHNATRLIIAHNHPSGNVEPSHQDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ ++     L++ + DH+I+G   + S + +
Sbjct: 199 ELTRQLLEGGQFLSLPILDHLILGNGDYGSIRQM 232


>gi|60680007|ref|YP_210151.1| putative DNA repair protein [Bacteroides fragilis NCTC 9343]
 gi|265765155|ref|ZP_06093430.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|60491441|emb|CAH06191.1| putative DNA repair protein [Bacteroides fragilis NCTC 9343]
 gi|263254539|gb|EEZ25973.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 230

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   +I     S G ID     +R I++  L   AT I L+HNHPSG+  PS  D 
Sbjct: 134 LLLNQACKVINKLRISTGGIDGTYADVRTILREALIGRATQIALIHNHPSGHAKPSQEDK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      +NI + DH+I+    F SF    +I
Sbjct: 194 RLTGAIQKASQTMNITLVDHVIVCDGCFYSFADEGLI 230


>gi|189464342|ref|ZP_03013127.1| hypothetical protein BACINT_00683 [Bacteroides intestinalis DSM
           17393]
 gi|189438132|gb|EDV07117.1| hypothetical protein BACINT_00683 [Bacteroides intestinalis DSM
           17393]
          Length = 228

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ + +I     SRG ID     +R I++  L   AT I L+HNHPSG+P PS  D 
Sbjct: 132 LLLNQASRVIDKSRISRGGIDQTTADVRSILREALMQRATQIALIHNHPSGSPRPSTDDQ 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      +NI + DH+I+    + SF    +I
Sbjct: 192 RLTQLVQKGAQTMNIRLIDHVIVTDGVYYSFNDEGMI 228


>gi|291288346|ref|YP_003505162.1| DNA repair protein RadC [Denitrovibrio acetiphilus DSM 12809]
 gi|290885506|gb|ADD69206.1| DNA repair protein RadC [Denitrovibrio acetiphilus DSM 12809]
          Length = 221

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD +  L+  E   +GT+D + VY REI +R +   AT +I+ HNHPSGN +PS+ DI
Sbjct: 125 LFLDVNKKLLGFENLFKGTVDRLAVYPREIAERAITSKATHVIVAHNHPSGNMSPSETDI 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +I  L  L+I + DHIII    F SFK  ++I
Sbjct: 185 TLTDKLIKALAALDINLADHIIITTKGFYSFKREQVI 221


>gi|227538101|ref|ZP_03968150.1| DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242177|gb|EEI92192.1| DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33300]
          Length = 229

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ +++++ ++  RG  D  PV +R I++  L   A+S+ILVHNHPSG+  PS+ D+
Sbjct: 132 LYLNRASVILSQQLIGRGGNDFTPVDVRIILKHALNCQASSMILVHNHPSGSLKPSNQDL 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+     ++I V DH+I     + SF+   ++
Sbjct: 192 QLTKKIVDASKIMDIRVMDHVIFTNSKYFSFQDEGLM 228


>gi|71907853|ref|YP_285440.1| DNA repair protein RadC [Dechloromonas aromatica RCB]
 gi|71847474|gb|AAZ46970.1| DNA repair protein RadC [Dechloromonas aromatica RCB]
          Length = 193

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + LI  E   RGT+    VY RE+V+  L  +A ++ + HNHPSG   PS AD 
Sbjct: 97  LYLDAQHRLIEVEELFRGTLTQTSVYPRELVKGALARNAAALAVAHNHPSGEAEPSRADE 156

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ++   L+ +++ V DH ++  D  VSF    ++
Sbjct: 157 LLTQSLKQALSLVDVRVIDHFVVAGDTVVSFAERGLV 193


>gi|282878989|ref|ZP_06287753.1| DNA repair protein [Prevotella buccalis ATCC 35310]
 gi|281298988|gb|EFA91393.1| DNA repair protein [Prevotella buccalis ATCC 35310]
          Length = 148

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ + +IA    S G I    V +R I+Q  L  +A+ I+L HNHPSGN +PS  D 
Sbjct: 52  LYLNQASEVIAYNTISEGGISETAVDVRMILQGALLTNASQILLCHNHPSGNLHPSTQDD 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      L     DH+II  + + S++    I
Sbjct: 112 MLTRRIKEACEILRYHFTDHLIISNNGYYSYRDEGRI 148


>gi|169636491|ref|YP_001716032.1| putative DNA repair protein RadC [Geobacillus stearothermophilus]
 gi|169403031|emb|CAP08244.1| putative DNA repair protein RadC [Geobacillus stearothermophilus]
          Length = 146

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N ++A      G+++   V+ RE+ +  +  ++ SII+ H HPSG+  PS  D+
Sbjct: 48  MCLNTKNEVVAVHRCHIGSLNSSIVHPREVFKAAILNNSASIIVAHQHPSGDVTPSKEDV 107

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRI 96
            MT+ +      L I V DH++I  K  + S K    
Sbjct: 108 EMTRRLAEAGRILGIEVLDHLVINYKAEYTSLKERGF 144


>gi|329964659|ref|ZP_08301713.1| putative DNA repair protein RadC [Bacteroides fluxus YIT 12057]
 gi|328525059|gb|EGF52111.1| putative DNA repair protein RadC [Bacteroides fluxus YIT 12057]
          Length = 258

 Score =  111 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L +++ + +I     SRG ID     +R I++  L   AT I L+HNHPSGNP+PS  D 
Sbjct: 162 LLMNQASRVIDKVRISRGGIDQTTADVRSILREALLQRATQIALIHNHPSGNPHPSRDDQ 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      +NI + DH+II    + SF    ++
Sbjct: 222 RLTELVQKGAQTMNIRLTDHVIITDGRYYSFCDEGML 258


>gi|256963297|ref|ZP_05567468.1| DNA repair protein RadC [Enterococcus faecalis HIP11704]
 gi|257080170|ref|ZP_05574531.1| DNA repair protein RadC [Enterococcus faecalis JH1]
 gi|307270181|ref|ZP_07551496.1| DNA repair protein RadC domain protein [Enterococcus faecalis
           TX4248]
 gi|307282664|ref|ZP_07562867.1| DNA repair protein RadC domain protein [Enterococcus faecalis
           TX0860]
 gi|256953793|gb|EEU70425.1| DNA repair protein RadC [Enterococcus faecalis HIP11704]
 gi|256988200|gb|EEU75502.1| DNA repair protein RadC [Enterococcus faecalis JH1]
 gi|306503720|gb|EFM72949.1| DNA repair protein RadC domain protein [Enterococcus faecalis
           TX0860]
 gi|306513472|gb|EFM82089.1| DNA repair protein RadC domain protein [Enterococcus faecalis
           TX4248]
          Length = 117

 Score =  111 bits (278), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N ++A      G+++   V+ RE+ +  +  +A S+I+ H HPS +  PS  DI
Sbjct: 20  MCLNTRNNVVAVLRCHVGSLNASLVHPREVFKSAILNNAASVIVAHQHPSDDITPSKEDI 79

Query: 61  NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97
           N+T+ ++     L+I V DH+++   + F S K    I
Sbjct: 80  NVTKRLVEAGKLLDIEVLDHLVVNSDNGFTSLKERGYI 117


>gi|189462975|ref|ZP_03011760.1| hypothetical protein BACCOP_03677 [Bacteroides coprocola DSM 17136]
 gi|189430257|gb|EDU99241.1| hypothetical protein BACCOP_03677 [Bacteroides coprocola DSM 17136]
          Length = 230

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ + +I     SRG +    V +R I++  L   A S++L HNHPSGN +PS  D 
Sbjct: 134 LLLNQSSKIIDRICISRGGLASTQVDVRCILREALLKRAVSMVLCHNHPSGNTSPSRDDD 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      +NI + DH++I    + S+     I
Sbjct: 194 RLTEALRRAAEVMNIRLLDHLVITDGGYYSYCDEGRI 230


>gi|21910313|ref|NP_664581.1| DNA repair protein RadC [Streptococcus pyogenes MGAS315]
 gi|21904509|gb|AAM79384.1| putative DNA repair protein [Streptococcus pyogenes MGAS315]
          Length = 209

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 49/94 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N +  ++    GT+       REI+    +  ATS+I++HNHPSGN  PS  D 
Sbjct: 112 LYLDNQNRIFEEKTIFIGTVRRSLAEPREILYYACKNMATSLIVIHNHPSGNIEPSSNDY 171

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ I  +   L II  DHII+    + SF+  
Sbjct: 172 CFTEKIKRSCEDLGIICLDHIIVSYKDYYSFREK 205


>gi|78486256|ref|YP_392181.1| DNA repair protein RadC [Thiomicrospira crunogena XCL-2]
 gi|78364542|gb|ABB42507.1| DNA repair protein radC homolog [Thiomicrospira crunogena XCL-2]
          Length = 237

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD+ N  I       GTI+   V+IRE+++  L+  A ++IL HNHPSG+P PS +D 
Sbjct: 140 VLLDQQNQFIQFVPLFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTPSQSDR 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97
           ++T  I   L  +     DHII+G    + SF    I+
Sbjct: 200 DLTHQIQQGLQLIETRCLDHIILGDHGRWYSFTQQGIL 237


>gi|78357485|ref|YP_388934.1| DNA repair protein RadC [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219890|gb|ABB39239.1| DNA repair protein RadC [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 225

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 57/95 (60%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           ++D+ N L+A E  +RGT++   +Y R++++  L   A+ +ILVHNHP G+  PS  D+ 
Sbjct: 130 YMDRQNRLLAWERATRGTVNASAIYPRDLMEAALRYKASGLILVHNHPGGSARPSAPDVE 189

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           +T+ +  +   L + + DH+I+ ++   S K   +
Sbjct: 190 VTKLVARSAASLGMTLVDHVIVTEEGHYSLKEDGL 224


>gi|254251634|ref|ZP_04944952.1| DNA repair protein RadC [Burkholderia dolosa AUO158]
 gi|124894243|gb|EAY68123.1| DNA repair protein RadC [Burkholderia dolosa AUO158]
          Length = 258

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  + +I  E  +RG++  + VY REIV+R L L+A ++I+ HNHPSG   PS  D 
Sbjct: 162 LYLDARHGVIDVEESARGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVQPSAEDR 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH+++G     SF     +
Sbjct: 222 RLTRVLREALALVDVRLLDHVVVGTAETFSFARAGWL 258


>gi|253564158|ref|ZP_04841615.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251947934|gb|EES88216.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301161548|emb|CBW21088.1| putative DNA repair protein [Bacteroides fragilis 638R]
          Length = 230

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   +I     S G ID     +R I++  L   AT I L+HNHPSG+  PS  D 
Sbjct: 134 LLLNQACKVINRLRISTGGIDGTYADVRTILREALIGRATQIALIHNHPSGHAKPSQEDK 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      +NI + DH+I+    F SF    +I
Sbjct: 194 RLTGAIQKASQTMNITLVDHVIVCDGCFYSFADEGLI 230


>gi|325103293|ref|YP_004272947.1| DNA repair protein RadC [Pedobacter saltans DSM 12145]
 gi|324972141|gb|ADY51125.1| DNA repair protein RadC [Pedobacter saltans DSM 12145]
          Length = 152

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+K N ++     S G +    V ++ +    L+  A S+IL HNHPSGN  PSDAD 
Sbjct: 56  MLLNKSNKVLGISHISTGGMSGTIVDVKVLFGIALKGGACSLILAHNHPSGNITPSDADK 115

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  II     L+I V DHII+  + F SF  + +I
Sbjct: 116 KLTNKIIEASKYLDIEVFDHIIVTPEKFYSFAEMGLI 152


>gi|317484766|ref|ZP_07943665.1| DNA repair protein RadC [Bilophila wadsworthia 3_1_6]
 gi|316923973|gb|EFV45160.1| DNA repair protein RadC [Bilophila wadsworthia 3_1_6]
          Length = 226

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 53/94 (56%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D  N L+  E  +RGT+  VP Y R+I++R L+  A+   LVHNHP G P  S  DI MT
Sbjct: 133 DAQNRLLTWERLARGTVGMVPCYPRDILERVLQRKASGFFLVHNHPGGTPKASPEDIEMT 192

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +NI      + + + DH+I+G  A  S +   ++
Sbjct: 193 RNIQRIATSMGLRLLDHLIVGDGACYSIREDGLL 226


>gi|282889987|ref|ZP_06298522.1| hypothetical protein pah_c008o090 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500180|gb|EFB42464.1| hypothetical protein pah_c008o090 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 238

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +  D    +I     + GT+    V+ RE+    +   A S+ILVHNHPSG+P PS  D+
Sbjct: 135 ILQDVKGYVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPTPSKEDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ ++     + I V+DHIIIG+D +VS +    
Sbjct: 195 DVTKTLVAVGRLVGICVNDHIIIGRDRYVSLREEGF 230


>gi|172046616|sp|Q31EB6|Y1917_THICR RecName: Full=UPF0758 protein Tcr_1917
          Length = 225

 Score =  110 bits (277), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD+ N  I       GTI+   V+IRE+++  L+  A ++IL HNHPSG+P PS +D 
Sbjct: 128 VLLDQQNQFIQFVPLFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTPSQSDR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97
           ++T  I   L  +     DHII+G    + SF    I+
Sbjct: 188 DLTHQIQQGLQLIETRCLDHIILGDHGRWYSFTQQGIL 225


>gi|167755855|ref|ZP_02427982.1| hypothetical protein CLORAM_01372 [Clostridium ramosum DSM 1402]
 gi|167704794|gb|EDS19373.1| hypothetical protein CLORAM_01372 [Clostridium ramosum DSM 1402]
          Length = 225

 Score =  110 bits (277), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+    +I ++    G  +   +  RE+ +  L   +  +++VHNHPSGNP PS  DI
Sbjct: 127 LCLNSRLEVIKEKTVFIGGNNISIISGRELFKEALICGSNRVMVVHNHPSGNPEPSIEDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ + +    L+I V DH+IIG+  F SF   +II
Sbjct: 187 EATERLYSMAKELDIDVVDHLIIGRSRFYSFASNKII 223


>gi|256004185|ref|ZP_05429168.1| DNA repair protein RadC [Clostridium thermocellum DSM 2360]
 gi|281419441|ref|ZP_06250455.1| DNA repair protein RadC [Clostridium thermocellum JW20]
 gi|255991775|gb|EEU01874.1| DNA repair protein RadC [Clostridium thermocellum DSM 2360]
 gi|281406847|gb|EFB37111.1| DNA repair protein RadC [Clostridium thermocellum JW20]
 gi|316939647|gb|ADU73681.1| DNA repair protein RadC [Clostridium thermocellum DSM 1313]
          Length = 221

 Score =  110 bits (277), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 53/95 (55%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  + +IA  V S G +++V V+ RE+    +   AT++I+ HNHPSG+  PS  DI +
Sbjct: 125 LNGASEVIATRVVSVGLVNNVQVHPREVFADPITDRATAVIVAHNHPSGSVAPSQEDIEV 184

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +    N L I + DHII  +  + SF     +
Sbjct: 185 TKRLKDAGNTLGIKLIDHIIFSRKGYFSFLENGQM 219


>gi|300772729|ref|ZP_07082599.1| DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761032|gb|EFK57858.1| DNA repair protein RadC [Sphingobacterium spiritivorum ATCC 33861]
          Length = 229

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++ ++++  ++  +G  D  PV +R I++  L   A+S+ILVHNHPSG+  PS+ D+
Sbjct: 132 LYLNRASVILNQQLIGKGGNDFTPVDVRIILKHALNCQASSMILVHNHPSGSLKPSNQDL 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+     ++I V DH+I     + SF+   ++
Sbjct: 192 QLTKKIVDASKIMDIRVMDHVIFTNSKYFSFQDEGLM 228


>gi|239501672|ref|ZP_04660982.1| DNA repair protein, associated with replication forks
           [Acinetobacter baumannii AB900]
          Length = 235

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G++ H  V + + ++  L+  A  +++ HNHP G+P PS  DI
Sbjct: 131 LCLDAELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSPQPSLEDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I + DH II  +   SF   +++
Sbjct: 191 KLTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 227


>gi|113970038|ref|YP_733831.1| DNA repair protein RadC [Shewanella sp. MR-4]
 gi|113884722|gb|ABI38774.1| DNA repair protein RadC [Shewanella sp. MR-4]
          Length = 164

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + L+  +    GT+D   VY RE+V+  L ++A ++I  HNHPSG   PS AD 
Sbjct: 69  MLLDNQHQLLEFKELFFGTLDAASVYPREVVKAVLAVNAAAVIFAHNHPSGESEPSAADK 128

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ V DHI++G+   VSF    ++
Sbjct: 129 YITQRLTDALALIDVRVLDHIVVGR-TPVSFAERGLL 164


>gi|301310981|ref|ZP_07216910.1| DNA repair protein RadC [Bacteroides sp. 20_3]
 gi|300831044|gb|EFK61685.1| DNA repair protein RadC [Bacteroides sp. 20_3]
          Length = 235

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 28/91 (30%), Positives = 47/91 (51%)

Query: 7   NILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNI 66
           N +I     S+G ++   V IR +++  +   A+ IIL HNHPSG+  PS  D  +T+ I
Sbjct: 143 NKVIQKVKISQGGVNQTSVDIRLVLKAAINALASGIILCHNHPSGSLRPSTHDDALTERI 202

Query: 67  ITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
                 ++I + DHII+    + S+     +
Sbjct: 203 QKAAKLMDIRILDHIILSDSGYYSYADEGRL 233


>gi|329724695|gb|EGG61201.1| DNA repair protein RadC [Staphylococcus epidermidis VCU144]
          Length = 226

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+       +GT++   ++ RE+    +  S+ SII+VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNIVTKQAWVYKGTLNSSIIHPREVFNIAIRESSNSIIVVHNHPSGDVTPSKEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +    + L I + DHIIIG + F S      
Sbjct: 188 TTTYRLKECGDILGINLLDHIIIGDNKFTSLVEAGY 223


>gi|293611113|ref|ZP_06693412.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826765|gb|EFF85131.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 235

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G++ H PV + + ++  L+  A  +++ HNHP G+  PS  DI
Sbjct: 131 LCLDPELRKLHFKKLFFGSVQHCPVSVNQTLRYALQQHACQLVIAHNHPFGSAQPSSQDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I + DH II  +   SF   +++
Sbjct: 191 ALTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 227


>gi|114776910|ref|ZP_01451953.1| DNA repair protein RadC [Mariprofundus ferrooxydans PV-1]
 gi|114552996|gb|EAU55427.1| DNA repair protein RadC [Mariprofundus ferrooxydans PV-1]
          Length = 261

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F D+ + L+  ++   GT+D   VY R +++R LEL A  +IL HNHP G P+ S+ DI
Sbjct: 165 MFTDQQHRLLTTQILFEGTVDRTAVYPRNLMKRALELDARGMILFHNHPGGTPHASNEDI 224

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +     PL + + DH +I     +SF+    
Sbjct: 225 ELTRRMAEACAPLELKILDHFLIADKEVLSFREHGW 260


>gi|298242247|ref|ZP_06966054.1| DNA repair protein RadC [Ktedonobacter racemifer DSM 44963]
 gi|297555301|gb|EFH89165.1| DNA repair protein RadC [Ktedonobacter racemifer DSM 44963]
          Length = 244

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N ++ +  +  GT++   +   EI +  +  +   IIL HNHPSG+P PS  DI
Sbjct: 147 LLLDTKNQVVENISRYHGTVNSSVMRAAEIFRPAVIRNCPGIILCHNHPSGDPTPSPEDI 206

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             T+ ++     LNI + DHIIIG   FVS K  
Sbjct: 207 ESTKQLVVAGRILNIELVDHIIIGNLRFVSLKEH 240


>gi|27468254|ref|NP_764891.1| DNA repair protein RadC-like protein [Staphylococcus epidermidis
           ATCC 12228]
 gi|251811058|ref|ZP_04825531.1| DNA repair protein RadC [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875922|ref|ZP_06284789.1| DNA repair protein RadC [Staphylococcus epidermidis SK135]
 gi|293366390|ref|ZP_06613069.1| DNA repair protein RadC [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|38372483|sp|Q8CNZ4|Y1336_STAES RecName: Full=UPF0758 protein SE_1336
 gi|27315800|gb|AAO04935.1|AE016748_169 DNA repair protein RadC-like protein [Staphylococcus epidermidis
           ATCC 12228]
 gi|251805434|gb|EES58091.1| DNA repair protein RadC [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294947|gb|EFA87474.1| DNA repair protein RadC [Staphylococcus epidermidis SK135]
 gi|291319515|gb|EFE59882.1| DNA repair protein RadC [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329733795|gb|EGG70121.1| DNA repair protein RadC [Staphylococcus epidermidis VCU045]
 gi|329737143|gb|EGG73397.1| DNA repair protein RadC [Staphylococcus epidermidis VCU028]
          Length = 226

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+       +GT++   ++ RE+    +  S+ SII+VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNIVTKQAWVYKGTLNSSIIHPREVFNIAIRESSNSIIVVHNHPSGDVTPSKEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +    + L I + DHIIIG + F S      
Sbjct: 188 TTTYRLKECGDILGINLLDHIIIGDNKFTSLVEAGY 223


>gi|223940790|ref|ZP_03632624.1| DNA repair protein RadC [bacterium Ellin514]
 gi|223890547|gb|EEF57074.1| DNA repair protein RadC [bacterium Ellin514]
          Length = 244

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 6/102 (5%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+    LI  E  ++GT+D + ++ RE+ +  +  +A++I+L HNHPSG+P PS+ADI
Sbjct: 141 VLLNTRRKLIRVENITQGTLDTLLIHPREVFKSAISANASAIVLAHNHPSGDPTPSEADI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK------DAFVSFKGLRI 96
            +T+++I     L I + DHII+G+        + S + L  
Sbjct: 201 KVTRDLIRAGQLLKIEILDHIILGRRTNERPKDYASLRELGY 242


>gi|242242925|ref|ZP_04797370.1| DNA repair protein RadC [Staphylococcus epidermidis W23144]
 gi|242233640|gb|EES35952.1| DNA repair protein RadC [Staphylococcus epidermidis W23144]
          Length = 226

 Score =  110 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  NI+       +GT++   ++ RE+    +  S+ SII+VHNHPSG+  PS  DI
Sbjct: 128 LLLNSKNIVTKQAWVYKGTLNSSIIHPREVFNIAIRESSNSIIVVHNHPSGDVTPSKEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             T  +    + L I + DHIIIG + F S      
Sbjct: 188 TTTYRLKECGDILGINLLDHIIIGDNKFTSLVEAGY 223


>gi|237734823|ref|ZP_04565304.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|229382151|gb|EEO32242.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 225

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+    +I ++    G  +   +  RE+ +  L   +  +++VHNHPSGNP PS  DI
Sbjct: 127 LCLNSRLEVIKEKTVFIGGNNISIISGRELFKEALICGSNRVMVVHNHPSGNPEPSIEDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ + +    L+I V DH+IIG+  F SF   +II
Sbjct: 187 EATERLYSMAKELDIDVVDHLIIGRSRFYSFASNKII 223


>gi|150009187|ref|YP_001303930.1| putative DNA repair protein [Parabacteroides distasonis ATCC 8503]
 gi|256841743|ref|ZP_05547249.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|298377073|ref|ZP_06987027.1| DNA repair protein RadC [Bacteroides sp. 3_1_19]
 gi|149937611|gb|ABR44308.1| putative DNA repair protein [Parabacteroides distasonis ATCC 8503]
 gi|256736637|gb|EEU49965.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|298266057|gb|EFI07716.1| DNA repair protein RadC [Bacteroides sp. 3_1_19]
          Length = 235

 Score =  110 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 28/91 (30%), Positives = 47/91 (51%)

Query: 7   NILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNI 66
           N +I     S+G ++   V IR +++  +   A+ IIL HNHPSG+  PS  D  +T+ I
Sbjct: 143 NKVIQKVKISQGGVNQTSVDIRLVLKAAINALASGIILCHNHPSGSLRPSTHDDALTERI 202

Query: 67  ITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
                 ++I + DHII+    + S+     +
Sbjct: 203 QKAAKLMDIRILDHIILSDSGYYSYADEGRL 233


>gi|125975527|ref|YP_001039437.1| DNA repair protein RadC [Clostridium thermocellum ATCC 27405]
 gi|125715752|gb|ABN54244.1| DNA repair protein RadC [Clostridium thermocellum ATCC 27405]
          Length = 221

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 53/95 (55%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  + +IA  V S G +++V V+ RE+    +   AT++I+ HNHPSG+  PS  DI +
Sbjct: 125 LNGASEVIATRVVSVGLVNNVQVHPREVFADPITDRATAVIVAHNHPSGSVAPSQEDIEV 184

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +    N L I + DHII  +  + SF     +
Sbjct: 185 TKRLKDAGNTLGIKLIDHIIFSRKGYFSFLENGQM 219


>gi|300869667|ref|YP_003784538.1| putative DNA repair protein RadC [Brachyspira pilosicoli 95/1000]
 gi|300687366|gb|ADK30037.1| putative DNA repair protein, RadC [Brachyspira pilosicoli 95/1000]
          Length = 230

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD +  LI+ E   RGTID   +Y R++V++ L L ++ +IL HNHPSG   PS ADI
Sbjct: 123 ICLDINKRLISIEQIFRGTIDSATIYPRDLVEKALSLGSSYVILSHNHPSGIAKPSKADI 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      +NI V DHIII  +   SF+   I+
Sbjct: 183 EITEIIYKAFFMVNIKVLDHIIIAGNIHYSFRENGIL 219


>gi|167747626|ref|ZP_02419753.1| hypothetical protein ANACAC_02347 [Anaerostipes caccae DSM 14662]
 gi|239625062|ref|ZP_04668093.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|167652988|gb|EDR97117.1| hypothetical protein ANACAC_02347 [Anaerostipes caccae DSM 14662]
 gi|239521448|gb|EEQ61314.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 282

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 56/95 (58%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L  +  +I   + S GT++   +  REI +  +  +A S+IL+HNHPSG+  PS  D+ M
Sbjct: 45  LKTNGQVINVNIASMGTLNSCILSPREIFKASILSNAASVILMHNHPSGDCTPSKQDVLM 104

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++     + I V DH+I+GK+ ++S K   ++
Sbjct: 105 TKRLVACGELIGITVLDHVILGKETYLSMKEANMM 139


>gi|258405551|ref|YP_003198293.1| DNA repair protein RadC [Desulfohalobium retbaense DSM 5692]
 gi|257797778|gb|ACV68715.1| DNA repair protein RadC [Desulfohalobium retbaense DSM 5692]
          Length = 228

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 33/94 (35%), Positives = 53/94 (56%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D  N L        GT+D   VY RE+++  L   A+ +ILVHNHP G+P PS  D ++T
Sbjct: 135 DNKNRLCDFCRLFTGTVDQTAVYPREVLRLALTKQASGLILVHNHPGGDPTPSPQDKDLT 194

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             +++    L   + DH+I+ ++AF SF+   ++
Sbjct: 195 NRLLSASRELGFRILDHVIVCEEAFFSFQSSHML 228


>gi|217967270|ref|YP_002352776.1| DNA repair protein RadC [Dictyoglomus turgidum DSM 6724]
 gi|217336369|gb|ACK42162.1| DNA repair protein RadC [Dictyoglomus turgidum DSM 6724]
          Length = 228

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +++D  N  +   + ++G ++ V    REI +  L+ +++ +IL HNHPSG+  PS+ DI
Sbjct: 132 IYMDVKNKCLNKRLIAKGDLNIVYASPREIFKYALQENSSKLILAHNHPSGDLTPSEDDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +I     L + + DH+II  + +VS K  ++I
Sbjct: 192 IFTKRLIEAGKILGLEILDHLIIYNEDYVSLKEKKLI 228


>gi|225870498|ref|YP_002746445.1| DNA repair protein RadC [Streptococcus equi subsp. equi 4047]
 gi|254789660|sp|C0MA71|Y1136_STRE4 RecName: Full=UPF0758 protein SEQ_1136
 gi|225699902|emb|CAW93813.1| DNA repair protein RadC [Streptococcus equi subsp. equi 4047]
          Length = 225

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  N +I ++    GT+       REI+    +  ATS+I+VHNHPSG   PS  D 
Sbjct: 128 IYLDSQNKIIEEKTIFIGTVRKSIAEPREILYYACKNMATSLIVVHNHPSGLTKPSANDY 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           + T+ I  + + L +I  DHII+ K  + SF+  
Sbjct: 188 HFTEKIKRSCDYLGLICLDHIIVSKYDYYSFREK 221


>gi|218131967|ref|ZP_03460771.1| hypothetical protein BACEGG_03590 [Bacteroides eggerthii DSM 20697]
 gi|217985843|gb|EEC52183.1| hypothetical protein BACEGG_03590 [Bacteroides eggerthii DSM 20697]
          Length = 241

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   +I     SRG ID     +R +++  L   AT I LVHNHPSGNP+PSD D 
Sbjct: 145 LLLNQATHVIDKVRISRGGIDQTSADVRSVLREALLQRATQIALVHNHPSGNPHPSDDDR 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I      +NI + DH+II    + SF    ++
Sbjct: 205 RLTQLIQKGAQTMNIRMIDHVIITDGLYYSFNDEGML 241


>gi|237739010|ref|ZP_04569491.1| DNA repair protein radC [Fusobacterium sp. 2_1_31]
 gi|229423610|gb|EEO38657.1| DNA repair protein radC [Fusobacterium sp. 2_1_31]
          Length = 242

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +IA E  S GT+D   +Y REI +R +  +A SII+ HNHPSGN  PS  DI
Sbjct: 146 IYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNTCPSKCDI 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I   L     ++ +HIII +D++ SF    +I
Sbjct: 206 DITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI 242


>gi|312794199|ref|YP_004027122.1| DNA repair protein radc [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181339|gb|ADQ41509.1| DNA repair protein RadC [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 232

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    +I       GT+    VY R++V+  +  +A+S+IL HNHP G+  PS  DI
Sbjct: 131 ICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             TQ I+  L+ + + V+DH I+ KD + SF    ++
Sbjct: 191 KTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227


>gi|294783990|ref|ZP_06749312.1| DNA repair protein RadC [Fusobacterium sp. 1_1_41FAA]
 gi|294479802|gb|EFG27581.1| DNA repair protein RadC [Fusobacterium sp. 1_1_41FAA]
          Length = 236

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +IA E  S GT+D   +Y REI +R +  +A SII+ HNHPSGN  PS  DI
Sbjct: 140 IYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNTCPSKCDI 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I   L     ++ +HIII +D++ SF    +I
Sbjct: 200 DITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI 236


>gi|317051923|ref|YP_004113039.1| DNA repair protein RadC [Desulfurispirillum indicum S5]
 gi|316947007|gb|ADU66483.1| DNA repair protein RadC [Desulfurispirillum indicum S5]
          Length = 216

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 50/95 (52%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD    ++   + + GT++   V+ RE+    L   A SII+ HNHPSG+  PS  D N+
Sbjct: 122 LDGAGCVLQRRIVTIGTLNASLVHPREVFSDALTDRAASIIVAHNHPSGSVEPSQEDHNI 181

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +  +   L I + DHIII     VSFK    +
Sbjct: 182 TRRLRQSGELLGIPLLDHIIISPKGEVSFKECNYL 216


>gi|325123441|gb|ADY82964.1| DNA repair protein, associated with replication forks
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 239

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G++ H  V + + ++  L+  A  +++ HNHP G+P PS  DI
Sbjct: 135 LCLDPELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSPQPSSEDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I + DH II  +   SF   +++
Sbjct: 195 ALTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 231


>gi|303236161|ref|ZP_07322762.1| putative DNA repair protein RadC [Prevotella disiens FB035-09AN]
 gi|302483667|gb|EFL46661.1| putative DNA repair protein RadC [Prevotella disiens FB035-09AN]
          Length = 229

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L ++++  LI  +  SRG +    V +R I++  L  +AT + + HNHPS N +PS  D 
Sbjct: 133 LLMNQNYKLIESKPISRGGLTETSVDVRVILKSALLKNATVVAICHNHPSNNAHPSREDD 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + +   DH+II   A+ S++    I
Sbjct: 193 IITKRVKEACEIMRLYFLDHLIITDGAYYSYREEGRI 229


>gi|312878119|ref|ZP_07738052.1| DNA repair protein RadC [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795101|gb|EFR11497.1| DNA repair protein RadC [Caldicellulosiruptor lactoaceticus 6A]
          Length = 232

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    +I       GT+    VY R++V+  +  +A+S+IL HNHP G+  PS  DI
Sbjct: 131 ICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             TQ I+  L+ + + V+DH I+ KD + SF    ++
Sbjct: 191 KTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227


>gi|117920251|ref|YP_869443.1| DNA repair protein RadC [Shewanella sp. ANA-3]
 gi|117612583|gb|ABK48037.1| DNA repair protein RadC [Shewanella sp. ANA-3]
          Length = 168

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + L+  +    GT+D   VY RE+V+  L ++A ++I  HNHPSG   PS AD 
Sbjct: 73  MLLDNQHQLLEFKELFFGTLDAASVYPREVVKVVLAVNAAAVIFAHNHPSGESEPSVADK 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +   L  +++ V DHI++G+   VSF    ++
Sbjct: 133 HITQRLTDALALIDVRVLDHIVVGR-TPVSFAERGLL 168


>gi|294842541|ref|ZP_06787224.1| DNA repair protein RadC [Acinetobacter sp. 6014059]
 gi|322509402|gb|ADX04856.1| DNA repair protein radC-like protein [Acinetobacter baumannii
           1656-2]
 gi|323519423|gb|ADX93804.1| DNA repair protein, associated with replication forks
           [Acinetobacter baumannii TCDC-AB0715]
          Length = 235

 Score =  110 bits (275), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 47/97 (48%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G++ H  V + + ++  L+  A  +++ HNHP G+  PS  DI
Sbjct: 131 LCLDAELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSAQPSLEDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I + DH II  +   SF   +++
Sbjct: 191 KLTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 227


>gi|126178013|ref|YP_001045978.1| DNA repair protein RadC [Methanoculleus marisnigri JR1]
 gi|125860807|gb|ABN55996.1| DNA replication and repair protein RadC [Methanoculleus marisnigri
           JR1]
          Length = 223

 Score =  110 bits (275), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 51/95 (53%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+    +I   + + G ++   V+ RE+    +   A S+ILVHNHPSG   PS  D+ +
Sbjct: 129 LNGAGAVIERRIVTVGILNQSLVHPREVFSDAITDRAASVILVHNHPSGTLEPSAQDLAI 188

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++   + L I V DHII+ K+   S K L  +
Sbjct: 189 TRQLVEAGSILGIRVLDHIIVTKNGCASLKELGHL 223


>gi|222528576|ref|YP_002572458.1| DNA repair protein RadC [Caldicellulosiruptor bescii DSM 6725]
 gi|312623124|ref|YP_004024737.1| DNA repair protein radc [Caldicellulosiruptor kronotskyensis 2002]
 gi|222455423|gb|ACM59685.1| DNA repair protein RadC [Caldicellulosiruptor bescii DSM 6725]
 gi|312203591|gb|ADQ46918.1| DNA repair protein RadC [Caldicellulosiruptor kronotskyensis 2002]
          Length = 232

 Score =  110 bits (275), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    +I       GT+    VY R++V+  +  +A+S+IL HNHP G+  PS  DI
Sbjct: 131 ICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             TQ I+  L+ + + V+DH I+ KD + SF    ++
Sbjct: 191 KTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227


>gi|317474431|ref|ZP_07933705.1| DNA repair protein RadC [Bacteroides eggerthii 1_2_48FAA]
 gi|316909112|gb|EFV30792.1| DNA repair protein RadC [Bacteroides eggerthii 1_2_48FAA]
          Length = 241

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   +I     SRG ID     +R +++  L   AT I LVHNHPSGNP+PSD D 
Sbjct: 145 LLLNQATHVIDKVRISRGGIDQTSADVRSVLREALLQRATQIALVHNHPSGNPHPSDDDR 204

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I      +NI + DH+II    + SF    ++
Sbjct: 205 RLTQLIQKGAQTMNIRMIDHVIITDGLYYSFNDEGML 241


>gi|288817942|ref|YP_003432289.1| DNA repair protein [Hydrogenobacter thermophilus TK-6]
 gi|288787341|dbj|BAI69088.1| DNA repair protein [Hydrogenobacter thermophilus TK-6]
 gi|308751539|gb|ADO45022.1| DNA repair protein RadC [Hydrogenobacter thermophilus TK-6]
          Length = 225

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 47/95 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L   N LI  ++ + G ++ V    ++I+   +     SIIL H HP G P PS ADI
Sbjct: 128 LYLTPSNTLIEYDLVAVGRLNSVFADPKDILYGAVRSVCHSIILAHTHPGGEPKPSKADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + TQ +      L   + DHIII K  + S +   
Sbjct: 188 DFTQRVKKACEILGFELLDHIIITKKGYFSMREGG 222


>gi|301046939|ref|ZP_07194052.1| DNA repair protein RadC domain protein [Escherichia coli MS 185-1]
 gi|300301126|gb|EFJ57511.1| DNA repair protein RadC domain protein [Escherichia coli MS 185-1]
          Length = 142

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 33/81 (40%), Positives = 51/81 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADR 121

Query: 61  NMTQNIITTLNPLNIIVHDHI 81
            +T+ ++  L  ++I V DH+
Sbjct: 122 LITERLVQALALVDIRVPDHL 142


>gi|119487791|ref|ZP_01621300.1| DNA repair protein RadC [Lyngbya sp. PCC 8106]
 gi|119455624|gb|EAW36761.1| DNA repair protein RadC [Lyngbya sp. PCC 8106]
          Length = 243

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 34/93 (36%), Positives = 53/93 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+  +V + GT      + REI +  ++  AT +I+ HNHPSGN  PS  DI
Sbjct: 139 LLLDVKNRLLGTKVITIGTATETLAHPREIFREVIKYGATRMIISHNHPSGNVEPSPEDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T+ ++     L+I + DH+I+G+  F S + 
Sbjct: 199 TLTRQLLAGAQVLSIPILDHLILGQGEFQSLRQ 231


>gi|184159489|ref|YP_001847828.1| DNA repair protein [Acinetobacter baumannii ACICU]
 gi|183211083|gb|ACC58481.1| DNA repair protein [Acinetobacter baumannii ACICU]
          Length = 239

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 47/97 (48%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G++ H  V + + ++  L+  A  +++ HNHP G+  PS  DI
Sbjct: 135 LCLDAELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSAQPSLEDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I + DH II  +   SF   +++
Sbjct: 195 KLTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLL 231


>gi|289547849|ref|YP_003472837.1| DNA repair protein RadC [Thermocrinis albus DSM 14484]
 gi|289181466|gb|ADC88710.1| DNA repair protein RadC [Thermocrinis albus DSM 14484]
          Length = 224

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L  +N +I  EV + G ++ +    ++I+ R +  +  SI++VHNHP G+  PS  DI
Sbjct: 128 VYLGPNNKVIDYEVVAIGRMNSLYAEPKDILYRAVHTACYSIVVVHNHPKGDLKPSQEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +      L   + DH+II K  +VS     ++
Sbjct: 188 EFTKRLKKACELLGFQLLDHLIINKKGYVSLLQTGLM 224


>gi|114047276|ref|YP_737826.1| DNA repair protein RadC [Shewanella sp. MR-7]
 gi|113888718|gb|ABI42769.1| DNA repair protein RadC [Shewanella sp. MR-7]
          Length = 168

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + L+  +    GT+D   VY RE+V+  L ++A ++I  HNHPSG   PS AD 
Sbjct: 73  MLLDNQHQLLEFKELFFGTLDAASVYPREVVKAVLAVNAAAVIFAHNHPSGESEPSAADK 132

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++TQ +   L  +++ V DHI++G+   VSF    ++
Sbjct: 133 HITQRLTDALALIDVRVLDHIVVGR-TPVSFAERGLL 168


>gi|227892639|ref|ZP_04010444.1| DNA repair protein RadC [Lactobacillus ultunensis DSM 16047]
 gi|227865510|gb|EEJ72931.1| DNA repair protein RadC [Lactobacillus ultunensis DSM 16047]
          Length = 212

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 52/96 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L++D  + +IA++   +GT++    + REI +  +    + I + HNHPSG   PS  D 
Sbjct: 116 LYIDNGSHVIAEKKLFQGTLNRSVAHPREIFRWAVIYGCSGIFIAHNHPSGKLMPSSNDF 175

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+++      + I   DH I+G+  ++S +  ++
Sbjct: 176 ELTEDLNEVAKMMKIDFLDHFIVGQGHYLSMREEKL 211


>gi|170076851|ref|YP_001733489.1| DNA repair protein RadC [Synechococcus sp. PCC 7002]
 gi|229485573|sp|B1XM86|Y220_SYNP2 RecName: Full=UPF0758 protein SYNPCC7002_A0220
 gi|169884520|gb|ACA98233.1| DNA repair protein RadC [Synechococcus sp. PCC 7002]
          Length = 243

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 54/94 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N LIA  V + G       + REI +  ++  AT +I+ HNHPSGN +PS  D+
Sbjct: 139 LCLDVKNTLIATRVVTIGLATETLAHPREIFREVIKHGATRLIIAHNHPSGNVDPSPEDL 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ ++ +   L I + DH+I+G+D F S +  
Sbjct: 199 QLTERLLQSAQILGIPLLDHLILGRDNFGSLRQK 232


>gi|163858876|ref|YP_001633174.1| putative DNA repair protein [Bordetella petrii DSM 12804]
 gi|163262604|emb|CAP44907.1| putative DNA repair protein [Bordetella petrii]
          Length = 174

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    LI      RGT+   PVY REI++  L  +A  +++ HNHPSG    S AD 
Sbjct: 78  MLLDVQLRLITYLEPFRGTLSQAPVYPREILKLALRHNAAGLMMAHNHPSGLAEASQADR 137

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +   L  +++ + DH I+     VS      +
Sbjct: 138 QLTQAVQQALALIDVRLLDHFIVAGTTVVSMAQRGQL 174


>gi|149199132|ref|ZP_01876171.1| DNA repair protein RadC [Lentisphaera araneosa HTCC2155]
 gi|149137729|gb|EDM26143.1| DNA repair protein RadC [Lentisphaera araneosa HTCC2155]
          Length = 169

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 6/103 (5%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +      SRG +D   V  RE+ +  L   A+ II+VHNHPSG   PS  D 
Sbjct: 59  LVLNTKNFITGYCEVSRGLVDRTHVACREVFRPALINGASKIIVVHNHPSGVLTPSHQDR 118

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG------KDAFVSFKGLRII 97
            +T N+      L + V DH+I+G      K  F+SF+    +
Sbjct: 119 TITNNLQEAGELLGVEVIDHLIVGYCLNKQKHHFLSFRQEGFM 161


>gi|313204670|ref|YP_004043327.1| DNA repair protein radc [Paludibacter propionicigenes WB4]
 gi|312443986|gb|ADQ80342.1| DNA repair protein RadC [Paludibacter propionicigenes WB4]
          Length = 233

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 47/94 (50%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L+  N +I  +  ++G      V I  +++  LE SA ++++ HNHPSG   PS  D  
Sbjct: 138 LLNGANKVIEIKRLTQGGSRQTVVDIPMLLKMALEKSALAVVVAHNHPSGQNRPSHEDEQ 197

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           +T+ I      + I + DHIII K  + SF    
Sbjct: 198 ITRKIKVGCEAIGITLLDHIIIAKGQYYSFADEG 231


>gi|255038888|ref|YP_003089509.1| DNA repair protein RadC [Dyadobacter fermentans DSM 18053]
 gi|254951644|gb|ACT96344.1| DNA repair protein RadC [Dyadobacter fermentans DSM 18053]
          Length = 234

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 48/95 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N ++     S G I      I+ I +  L+  A+S+ILVHNHPSG   PS AD 
Sbjct: 138 LLLNRGNCVMRAVQVSVGGISGTATDIKMIFKIALDHMASSVILVHNHPSGQLVPSMADR 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T  I      L++ V DH+I   D + SF    
Sbjct: 198 LLTSQIKEAGRLLDLPVLDHMIFTDDGYYSFLDSG 232


>gi|206901273|ref|YP_002250597.1| DNA repair protein [Dictyoglomus thermophilum H-6-12]
 gi|206740376|gb|ACI19434.1| DNA repair protein [Dictyoglomus thermophilum H-6-12]
          Length = 228

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +++D  N  ++  + ++G ++ V    R+I +  L+ ++  IIL HNHPSG+  PS+ D+
Sbjct: 132 IYMDIKNKCLSKRLIAKGDLNIVYASPRDIFKYALQENSAKIILAHNHPSGDLTPSEDDV 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +I     L I V DH+II  + ++S K    I
Sbjct: 192 IFTKRLIEAGKILGIEVLDHLIIHNEDYLSLKEKNFI 228


>gi|260548778|ref|ZP_05823000.1| DNA repair protein [Acinetobacter sp. RUH2624]
 gi|260407946|gb|EEX01417.1| DNA repair protein [Acinetobacter sp. RUH2624]
          Length = 235

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 46/97 (47%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     I  +    G++ H  V + + ++  L+  A  +++ HNH  G+  PS  DI
Sbjct: 131 LCLDAELRKIHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHTFGSAQPSREDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I + DH II  +   SF   +++
Sbjct: 191 KLTKQLEQACQLLEIRLLDHFIISPEGSFSFAEQQLL 227


>gi|319789619|ref|YP_004151252.1| DNA repair protein RadC [Thermovibrio ammonificans HB-1]
 gi|317114121|gb|ADU96611.1| DNA repair protein RadC [Thermovibrio ammonificans HB-1]
          Length = 222

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 53/89 (59%)

Query: 9   LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68
           L+     ++G ++   +  +E+ +  +   A ++IL HNHP+G+P+PS  D+ +T+ +I 
Sbjct: 134 LLGIHEVAKGAVNAAAITPKEVFRPAVRDLAEAVILFHNHPNGDPSPSAQDLKVTERLIE 193

Query: 69  TLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
               L I V DH+I+ ++ F SFKG  ++
Sbjct: 194 AGKVLGIEVLDHLIVTEETFFSFKGEGLV 222


>gi|225851003|ref|YP_002731237.1| DNA repair protein RadC [Persephonella marina EX-H1]
 gi|225646279|gb|ACO04465.1| DNA repair protein RadC [Persephonella marina EX-H1]
          Length = 229

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+ +  N L+ +E+ + G+++ V +  R+I    L  +A  IILVHNHP G+P PS  DI
Sbjct: 133 LYTNTMNQLLGEEIVAVGSLNIVNIKPRDIFIPALRYNAYGIILVHNHPEGSPEPSKEDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  I      +   + DHII+GK  + SF    +I
Sbjct: 193 KFTGLIKDLSIKMGFELLDHIIVGKKGYFSFSSEGLI 229


>gi|325970526|ref|YP_004246717.1| DNA repair protein RadC [Spirochaeta sp. Buddy]
 gi|324025764|gb|ADY12523.1| DNA repair protein RadC [Spirochaeta sp. Buddy]
          Length = 227

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  + +++  V S G ++   V+ RE+    +   AT+I++ HNHPSGN  PS  D 
Sbjct: 131 ICLNGAHEVLSVNVCSVGLVNRTLVHPREVFTEAVRQRATAIVVAHNHPSGNLQPSMEDK 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ +    + L I + DH+I G++ ++S     +
Sbjct: 191 DVTRRLRQAGDILGIKILDHLIFGEEGYLSMLEGSL 226


>gi|313157187|gb|EFR56617.1| DNA repair protein RadC [Alistipes sp. HGB5]
          Length = 211

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  +  S+G +    V  R I++R LEL AT +IL+HNHPSG    S  D 
Sbjct: 114 VYLTSSNRIIERQRVSQGGVQGTVVDHRLIIKRALELLATQLILIHNHPSGAAEASPQDK 173

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I       +I + DHIII ++   SF    +I
Sbjct: 174 VLTERIAQAAALFDIRLLDHIIIAREGDFSFLREGLI 210


>gi|71908171|ref|YP_285758.1| DNA repair protein RadC [Dechloromonas aromatica RCB]
 gi|71847792|gb|AAZ47288.1| DNA repair protein RadC [Dechloromonas aromatica RCB]
          Length = 193

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD H+ LI  E   RGT+    VY RE+V+  L  +A ++ L HNHPSG   PS AD 
Sbjct: 97  IYLDAHHRLIEAEELFRGTLTQTSVYPREVVKGALTRNAAALALAHNHPSGEAEPSRADE 156

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + + L+ +++ + DH I+  D  VSF  L +I
Sbjct: 157 LLTQTLKSALSLVDVRIIDHFIVAGDKVVSFAELGLI 193


>gi|299536250|ref|ZP_07049563.1| DNA repair protein RadC [Lysinibacillus fusiformis ZC1]
 gi|298728236|gb|EFI68798.1| DNA repair protein RadC [Lysinibacillus fusiformis ZC1]
          Length = 174

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N     +V   G+++   V+ RE+++  L  +A S I+ HNHPS   +PS  DI
Sbjct: 78  LCLDTKNQPTCLQVVHIGSLNASIVHPREVLKPALLSNAASAIVAHNHPSNVSDPSPEDI 137

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++     L I + DH+I+  D F S K    +
Sbjct: 138 EVTKRLVHAGEILGIDILDHLILCTDTFRSLKESGCM 174


>gi|294674886|ref|YP_003575502.1| DNA repair protein RadC [Prevotella ruminicola 23]
 gi|294471906|gb|ADE81295.1| DNA repair protein RadC [Prevotella ruminicola 23]
          Length = 229

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 47/95 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++   LI     +RG I    V IR I++  +  +AT ++  HNHPSG   PS  D 
Sbjct: 133 LLLNQQYRLIKKLRIARGGITATTVDIRLIIREAVLCNATQLVACHNHPSGGITPSKQDD 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T +I+     ++I   DH+I+    + S+    
Sbjct: 193 ELTISIMNACKLMDIHFADHVIVTDGHYYSYHEQG 227


>gi|320352278|ref|YP_004193617.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032]
 gi|320120780|gb|ADW16326.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032]
          Length = 159

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/86 (38%), Positives = 55/86 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++A      G+++   V+ REIV+  L L+A ++IL HNHPSG+  PS  DI
Sbjct: 62  LFLDGRHQVLAWRELFHGSVNRTTVHPREIVKEALRLNAAAVILAHNHPSGSTLPSSEDI 121

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKD 86
            +T+ +   L  +++ V DH+I+G++
Sbjct: 122 ELTKALTEILAIIDVRVLDHLIVGEE 147


>gi|70608421|gb|AAZ04485.1| DNA repair protein RadC [Acetobacter aceti]
          Length = 147

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 62/97 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  + L+AD++  +GT+DH PVY REIV R L+L AT ++LVHNHPSG+P PS  D+
Sbjct: 51  LFLNDQHQLLADDIMGQGTVDHTPVYPREIVARALQLKATLLVLVHNHPSGDPTPSADDV 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT  I      +NI V DHII+  +  +  +    +
Sbjct: 111 VMTNQICGAAKIMNIHVWDHIIVAGEKLLCMREAGFL 147


>gi|312142482|ref|YP_003993928.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus']
 gi|311903133|gb|ADQ13574.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus']
          Length = 149

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 1/96 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N L      S G++    V  RE+ +R L  +A +++L HNHPSG+ + S  DIN+
Sbjct: 54  LDAKNKLTGVFEVSIGSLTSSLVSPREVFKRALLQNAAAVVLGHNHPSGSIDFSSDDINI 113

Query: 63  TQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
           T+ ++ + N L I V DHI+IG ++ + S K   II
Sbjct: 114 TKKLVKSGNILGIKVVDHIVIGSREDYESMKERGII 149


>gi|169350149|ref|ZP_02867087.1| hypothetical protein CLOSPI_00891 [Clostridium spiroforme DSM 1552]
 gi|169292932|gb|EDS75065.1| hypothetical protein CLOSPI_00891 [Clostridium spiroforme DSM 1552]
          Length = 225

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+    ++ ++    G+ +   +  REI +  L   ++ I+++HNHPSGNP PS  DI
Sbjct: 127 LCLNSKLEVMKEKTVFIGSNNISIISGREIFKEALICGSSRIMVIHNHPSGNPKPSFEDI 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I + DH+IIG++ F SF    II
Sbjct: 187 EITKRLYRMAEELEIEIVDHLIIGRNKFYSFASKEII 223


>gi|295425103|ref|ZP_06817808.1| DNA repair protein RadC [Lactobacillus amylolyticus DSM 11664]
 gi|295065162|gb|EFG56065.1| DNA repair protein RadC [Lactobacillus amylolyticus DSM 11664]
          Length = 207

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L++D  N ++A++  S+GT+D   V+ R++ +  +  +  SII+ HNHPSG   PS +D+
Sbjct: 111 LYIDNGNHIVAEKKISQGTLDRSLVHPRDVFRWAVLFNCASIIVAHNHPSGKLMPSQSDL 170

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T ++I     + I   DH I+GK  ++S K   +
Sbjct: 171 KLTDDLIKIAGLMKINFLDHFILGKGHYLSMKENEL 206


>gi|282881095|ref|ZP_06289782.1| putative DNA repair protein RadC [Prevotella timonensis CRIS 5C-B1]
 gi|281304899|gb|EFA96972.1| putative DNA repair protein RadC [Prevotella timonensis CRIS 5C-B1]
          Length = 259

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 44/95 (46%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L +++   LI     S G I    V +R I++  +  +AT + L HNHPS    PS  D 
Sbjct: 162 LLMNQRYKLIKAMRISHGGISETAVDVRVIMREAVLSNATVLALCHNHPSNQAFPSTEDD 221

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ I      + I   DHII+    + S++   
Sbjct: 222 RLTKRIHEASQLMRIYFLDHIIVTDGRYYSYREEG 256


>gi|302344315|ref|YP_003808844.1| DNA repair protein RadC [Desulfarculus baarsii DSM 2075]
 gi|301640928|gb|ADK86250.1| DNA repair protein RadC [Desulfarculus baarsii DSM 2075]
          Length = 241

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 46/97 (47%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    LIA E    GTID   VY RE+    L   AT++   HNHPSG+  PS  D 
Sbjct: 131 MLLDGRRRLIAIEDVFSGTIDRAVVYPREVAALALARGATALACAHNHPSGDATPSTDDR 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + + + DHII+      SF     +
Sbjct: 191 AITRRLYYACQGVGLELVDHIIVAGRQLHSFAQSGFL 227


>gi|300867663|ref|ZP_07112308.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300334246|emb|CBN57480.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 243

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 49/93 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+  +V + GT      + R+I +  +   AT  I+ HNHPSGN  PS  DI
Sbjct: 139 LLLDVKNRLLGTQVLTIGTATETLAHPRDIFREVIRQGATRAIVSHNHPSGNLEPSPEDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T+ ++     L I + DH+I+G   F S + 
Sbjct: 199 ALTKQLLAGAQFLAIPLLDHLILGNGDFRSLRQ 231


>gi|160878328|ref|YP_001557296.1| DNA repair protein RadC [Clostridium phytofermentans ISDg]
 gi|160426994|gb|ABX40557.1| DNA repair protein RadC [Clostridium phytofermentans ISDg]
          Length = 156

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 50/95 (52%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD     +     S GT++   +  REI  R L   A  II+VHNHPS +  PS  D+ +
Sbjct: 62  LDMKCNPLGIFELSHGTVNSSLIMPREIFIRALLSGAVGIIIVHNHPSSDITPSKQDLLV 121

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ I    N + + + DHIIIG + + S K + ++
Sbjct: 122 TEKIAQAGNMIGVELLDHIIIGGNEYCSLKEMGVL 156


>gi|32472906|ref|NP_865900.1| hypothetical protein RB4105 [Rhodopirellula baltica SH 1]
 gi|32444143|emb|CAD73586.1| RadC [Rhodopirellula baltica SH 1]
          Length = 208

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 49/92 (53%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  + +I     + GT+D   V+ RE+ +  +  + + ++L HNHPSG+P PS  D  +
Sbjct: 115 LDTKHRMIDSHRITVGTLDASLVHPREVFRPAIRDACSCVLLAHNHPSGDPTPSREDFKV 174

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           TQ +      + I   DHI++ ++  +S +  
Sbjct: 175 TQQLTEVGKVIGITALDHIVLARENCLSLREQ 206


>gi|51244567|ref|YP_064451.1| DNA repair protein RadC [Desulfotalea psychrophila LSv54]
 gi|50875604|emb|CAG35444.1| related to DNA repair protein RadC [Desulfotalea psychrophila
           LSv54]
          Length = 249

 Score =  109 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I  E+ + G++    V+ RE++ + LE  A ++I+ HNHPSG   PS  DI
Sbjct: 137 VFLDSSHGIICSEIIAEGSLTVNTVHPRELLVKALEHHAAALIISHNHPSGALLPSPQDI 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    + + I + DHIIIG  A+ SF    ++
Sbjct: 197 QLTRLLYFLCSSMQIQLLDHIIIGDGAY-SFADHGLM 232


>gi|255015794|ref|ZP_05287920.1| putative DNA repair protein [Bacteroides sp. 2_1_7]
 gi|262384073|ref|ZP_06077209.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262294971|gb|EEY82903.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 235

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/91 (30%), Positives = 48/91 (52%)

Query: 7   NILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNI 66
           N +I     S+G ++   V IR +++  + + A+ IIL HNHPSG+  PS  D  +T+ I
Sbjct: 143 NKVIQKIKISQGGVNQTSVDIRLVLKAAINVLASGIILCHNHPSGSLRPSTHDDALTERI 202

Query: 67  ITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
                 ++I + DHII+    + S+     +
Sbjct: 203 QKAAKLMDIRILDHIILSDSGYYSYADEGRL 233


>gi|262374189|ref|ZP_06067465.1| DNA repair protein [Acinetobacter junii SH205]
 gi|262310747|gb|EEY91835.1| DNA repair protein [Acinetobacter junii SH205]
          Length = 246

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 45/97 (46%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G+     V + + ++  ++  A  I++ HNHP G   PS+ DI
Sbjct: 135 LCLDAELRKLHFKKLFYGSQHSCSVSLNQTLRYAIQQQACQIVVAHNHPYGIAQPSNEDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             TQ +      + I + DH II  D + SF   +++
Sbjct: 195 YFTQQLKQACKLVEIHLIDHFIISPDGYFSFTEQQLL 231


>gi|218439039|ref|YP_002377368.1| DNA repair protein RadC [Cyanothece sp. PCC 7424]
 gi|226736619|sp|B7KF44|Y2073_CYAP7 RecName: Full=UPF0758 protein PCC7424_2073
 gi|218171767|gb|ACK70500.1| DNA repair protein RadC [Cyanothece sp. PCC 7424]
          Length = 243

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/92 (35%), Positives = 52/92 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I  ++ S GT     V+ REI +  L+  AT +I+ HNHPSGN  PS  DI
Sbjct: 139 VLLNVKNQIIGTKLISIGTATETLVHPREIFREVLKQGATKLIIGHNHPSGNVAPSQEDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T+ ++     LN  + DH+I+G     S +
Sbjct: 199 DLTEQLLKAATFLNFPLLDHLILGNGNHQSLR 230


>gi|149924122|ref|ZP_01912501.1| DNA repair protein RadC [Plesiocystis pacifica SIR-1]
 gi|149815019|gb|EDM74577.1| DNA repair protein RadC [Plesiocystis pacifica SIR-1]
          Length = 260

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 52/95 (54%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD    ++     + G++  V V+ RE+ +  +   A + +LVHNHPSG+  PS+ADI +
Sbjct: 150 LDARQRVLLVRTIAVGSLTRVEVHPREVFRPLVRAGAHTCLLVHNHPSGDARPSEADIEL 209

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T  +      L I V DH+++  + FVS   L ++
Sbjct: 210 TARMTDIGRFLGIPVLDHVVVSANGFVSLAELGLV 244


>gi|16331325|ref|NP_442053.1| DNA repair protein RadC [Synechocystis sp. PCC 6803]
 gi|1710004|sp|P52601|Y766_SYNY3 RecName: Full=UPF0758 protein sll0766
 gi|1001498|dbj|BAA10123.1| RadC protein [Synechocystis sp. PCC 6803]
          Length = 243

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 51/93 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N L+A +V + GT     ++ REI +  ++  AT +I+ HNHPSG   PS  DI
Sbjct: 139 VMLDVKNRLLATKVITIGTATETLIHPREIFREVIKQGATRLIVAHNHPSGGLEPSPEDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T+ ++     L I V DH+I+G     S + 
Sbjct: 199 RLTEFLLQGAQYLQIPVLDHLILGHGKHQSLRQ 231


>gi|312892247|ref|ZP_07751743.1| DNA replication and repair protein RadC [Mucilaginibacter paludis
           DSM 18603]
 gi|311295222|gb|EFQ72395.1| DNA replication and repair protein RadC [Mucilaginibacter paludis
           DSM 18603]
          Length = 232

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + ++K N +I   + S+G +       + I Q  LE  A S+IL HNHPSGN  PS  D+
Sbjct: 136 MLMNKGNKIIGTHLISKGGLATTIADPKIIFQISLEHHAASVILAHNHPSGNLKPSAEDL 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ II     L+I + DHIII   A+ SF    ++
Sbjct: 196 SLTKKIIAGGKLLDITIFDHIIITDQAYYSFADEGVL 232


>gi|325298868|ref|YP_004258785.1| DNA repair protein RadC [Bacteroides salanitronis DSM 18170]
 gi|324318421|gb|ADY36312.1| DNA repair protein RadC [Bacteroides salanitronis DSM 18170]
          Length = 229

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ + +I     S+G +    V +R I++  L   A S+++ HNHPSG+  PS  D 
Sbjct: 133 LLLNQSSKVIDRMRISQGGLAATQVDVRCILREALLKRAVSLVVCHNHPSGSTVPSSDDD 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      +NI + DH+I+   A+ S+     +
Sbjct: 193 RLTQAVRQAAATMNIRLLDHLIVTDGAYYSYSDEGKL 229


>gi|198274552|ref|ZP_03207084.1| hypothetical protein BACPLE_00704 [Bacteroides plebeius DSM 17135]
 gi|198272606|gb|EDY96875.1| hypothetical protein BACPLE_00704 [Bacteroides plebeius DSM 17135]
          Length = 229

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++   +I     SRG +    V +R I++  L   ATS+IL HNHPSGN  PS  D 
Sbjct: 133 MLLNQAAKVIDTVKISRGGLASTQVDVRCILREALLKRATSMILCHNHPSGNIRPSQDDD 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  ++     +NI + DH+++    + S+     +
Sbjct: 193 RLTHALLEAARTMNIRLLDHVVVSDGDYYSYGDEGRL 229


>gi|88603975|ref|YP_504153.1| DNA repair protein RadC [Methanospirillum hungatei JF-1]
 gi|121721483|sp|Q2FT43|Y2739_METHJ RecName: Full=UPF0758 protein Mhun_2739
 gi|88189437|gb|ABD42434.1| DNA replication and repair protein RadC [Methanospirillum hungatei
           JF-1]
          Length = 225

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 49/95 (51%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  + +I     + G ++H  V+ RE+    +   A +II +HNHPSGNP PS  DI +
Sbjct: 131 LNGASEVICTRTITMGLLNHSLVHPREVFADAITDRAAAIICIHNHPSGNPEPSSEDITV 190

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +      L I + DH+I  K    S + L  +
Sbjct: 191 TRQLSEAGKILGISLLDHLIYTKGKVTSLRSLGYL 225


>gi|303241410|ref|ZP_07327913.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2]
 gi|302591019|gb|EFL60764.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2]
          Length = 178

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/96 (37%), Positives = 57/96 (59%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FLDK N +I  +V S G+I    VY R +++  L+    S+I+ HNHP G+  PS  D  
Sbjct: 30  FLDKGNNVIETKVLSEGSIGEAVVYPRAVLKAALDCDCKSMIVAHNHPGGSMVPSLQDKE 89

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +TQ +++   PL I V DHII+  ++++S +   +I
Sbjct: 90  ITQILVSIFTPLQINVLDHIIVANNSYLSMEERGMI 125


>gi|295135957|ref|YP_003586633.1| DNA repair protein [Zunongwangia profunda SM-A87]
 gi|294983972|gb|ADF54437.1| putative DNA repair protein [Zunongwangia profunda SM-A87]
          Length = 149

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +      S G I    V +R +    L+   T++IL+HNHPSG   PS+AD 
Sbjct: 52  LLLNNANKVKGIYEVSNGGITGTLVDVRILFAVLLKSLTTAVILLHNHPSGTLKPSEADK 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
            +TQ I       +I V DH+I+  +  + SF    I+
Sbjct: 112 RLTQKIKKAGELFDIKVLDHLILSPEGDYYSFADNGIL 149


>gi|217971586|ref|YP_002356337.1| DNA repair protein RadC [Shewanella baltica OS223]
 gi|217496721|gb|ACK44914.1| DNA repair protein RadC [Shewanella baltica OS223]
          Length = 163

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + L+  +    GT+D   VY RE+V+  L ++A ++I  HNHPSG   PS AD 
Sbjct: 68  MLLDNQHQLLEFKELFFGTLDAASVYPREVVKAVLAVNAAAVIFAHNHPSGESEPSTADK 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ +   L  +++ V DHI++G+   VSF    ++
Sbjct: 128 NITKRLTDALGLIDVRVLDHIVVGR-TPVSFAERGLL 163


>gi|112789947|gb|ABI21617.1| Smu18B [uncultured organism]
          Length = 154

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 57/95 (60%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  + +IA +  +RG  +   V+ RE+ +  + + A +II+ HNHPSG+P PS  D  +
Sbjct: 60  LNAQHRMIALQEVTRGIQNCSLVHPREVFRIAIAIGAAAIIVAHNHPSGDPAPSADDRAV 119

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++     L++ VHDHII+G  ++ SF    ++
Sbjct: 120 TEQLVAAGRLLDLPVHDHIIVGAGSYTSFAEAGLL 154


>gi|224024775|ref|ZP_03643141.1| hypothetical protein BACCOPRO_01503 [Bacteroides coprophilus DSM
           18228]
 gi|224017997|gb|EEF76009.1| hypothetical protein BACCOPRO_01503 [Bacteroides coprophilus DSM
           18228]
          Length = 147

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N L+     S+  I    V +R I+Q  L   A+ IIL HNHPSGN   S  D 
Sbjct: 51  MFLNQANRLLGLSCISKCGISQTVVDVRIILQTALLAHASGIILSHNHPSGNMVASSNDN 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      L+I + DHII+    ++S+    ++
Sbjct: 111 AITSKLKKACELLDITLLDHIILSDTGYLSYADEGML 147


>gi|296389000|ref|ZP_06878475.1| DNA repair protein RadC [Pseudomonas aeruginosa PAb1]
          Length = 82

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/82 (43%), Positives = 50/82 (60%)

Query: 2  FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
          FLD  + LI       GTID   V+ RE+V++ L L+A ++I+ HNHPSGNP PS AD  
Sbjct: 1  FLDTRHRLIDYVEMFHGTIDAAEVHPREVVKQALRLNAAAVIVSHNHPSGNPEPSAADKA 60

Query: 62 MTQNIITTLNPLNIIVHDHIII 83
          MT  +   L  +++   DHII+
Sbjct: 61 MTSQLRQALALVDVRTLDHIIV 82


>gi|319937413|ref|ZP_08011820.1| hypothetical protein HMPREF9488_02656 [Coprobacillus sp. 29_1]
 gi|319807779|gb|EFW04372.1| hypothetical protein HMPREF9488_02656 [Coprobacillus sp. 29_1]
          Length = 226

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 54/96 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N +I  +    G+++   V  RE+ +  + +S+  +IL+HNHPSG+  PS  D+
Sbjct: 125 LCLDIRNRVIKKKTIFIGSLNMSIVTPREVFKEAIGVSSAKMILLHNHPSGDALPSQEDL 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+  +     + I + DHIIIG + F S K  ++
Sbjct: 185 YLTEQFVKLGEMMAIEIMDHIIIGWNQFYSIKAKQL 220


>gi|260363782|ref|ZP_05776542.1| DNA repair protein RadC [Vibrio parahaemolyticus K5030]
 gi|308113336|gb|EFO50876.1| DNA repair protein RadC [Vibrio parahaemolyticus K5030]
          Length = 203

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/76 (44%), Positives = 48/76 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + +I DE+   GT+D   VY RE+V+R L  +A ++IL HNHPSG   PS AD 
Sbjct: 128 LFLDNQHRVIKDEILFEGTLDAASVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADR 187

Query: 61  NMTQNIITTLNPLNII 76
            +T+ +I  L  ++I 
Sbjct: 188 RITRRLIDALALVDIR 203


>gi|158337489|ref|YP_001518664.1| DNA repair protein RadC [Acaryochloris marina MBIC11017]
 gi|229485543|sp|B0CEV0|Y4368_ACAM1 RecName: Full=UPF0758 protein AM1_4368
 gi|158307730|gb|ABW29347.1| DNA repair protein RadC [Acaryochloris marina MBIC11017]
          Length = 243

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/93 (33%), Positives = 50/93 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + L+  +V S GT      + R+I +  +   AT  I+ HNHPSG  +PS  D+
Sbjct: 139 LLLDVKHRLLGTQVVSIGTATETLAHPRDIFREIIRKGATRAIVAHNHPSGQTDPSPEDL 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +TQ +++    L + + DH+I+G   F S + 
Sbjct: 199 ELTQQLLSGAQILGLPLLDHLILGNGDFTSLRQ 231


>gi|302871177|ref|YP_003839813.1| DNA repair protein RadC [Caldicellulosiruptor obsidiansis OB47]
 gi|302574036|gb|ADL41827.1| DNA repair protein RadC [Caldicellulosiruptor obsidiansis OB47]
          Length = 230

 Score =  108 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    +I       GT+    VY R++V+  +  +A+S+IL HNHP G+  PS  DI
Sbjct: 129 ICLDTQLNVIYSAPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N TQ I+  L+ + + V+DH I+  D + SF    I+
Sbjct: 189 NTTQKIVNALSTIGVTVNDHFIVAGDKYYSFAQNGIL 225


>gi|189501561|ref|YP_001957278.1| DNA repair protein RadC [Candidatus Amoebophilus asiaticus 5a2]
 gi|189497002|gb|ACE05549.1| DNA repair protein RadC [Candidatus Amoebophilus asiaticus 5a2]
          Length = 243

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/92 (36%), Positives = 51/92 (55%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L + N +I   + S G    + V  + I +  ++  A SIILVHNHPS NP PS+ DI +
Sbjct: 148 LTRANYVIKKHLISSGGTAQLAVDPKVIFKTAIDHHAASIILVHNHPSNNPKPSELDIQL 207

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           T+ ++     L+I + DHII  +D + SF   
Sbjct: 208 TERLVKGGKILDIPILDHIIFTEDTYFSFADE 239


>gi|157961087|ref|YP_001501121.1| DNA repair protein RadC [Shewanella pealeana ATCC 700345]
 gi|157846087|gb|ABV86586.1| DNA repair protein RadC [Shewanella pealeana ATCC 700345]
          Length = 158

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  + LI       GT+D   VY RE+V+  L ++A ++IL HNHPSG   PS AD 
Sbjct: 63  MMLDNQHRLIEFNELFFGTVDAASVYPREVVKAVLAVNAAAVILAHNHPSGEAEPSQADK 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ V DHI++GK   VSF    ++
Sbjct: 123 LITKRLTDALALIDVRVLDHIVVGK-TPVSFTERGLL 158


>gi|145308125|gb|ABP57311.1| hypothetical protein bst038 [Bacteroides uniformis]
          Length = 147

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N L+     S+  I    V +R I+Q  L   A+ IIL HNHPSGN   S +D 
Sbjct: 51  MFLNQANRLLGLSCISKCGISQTVVDVRIILQTALLAHASGIILSHNHPSGNMVASSSDN 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      L+I + DHII+    ++S+    ++
Sbjct: 111 ALTSKLKKACEILDITLLDHIILSDTGYLSYADEGML 147


>gi|319641253|ref|ZP_07995952.1| hypothetical protein HMPREF9011_01549 [Bacteroides sp. 3_1_40A]
 gi|317387126|gb|EFV68006.1| hypothetical protein HMPREF9011_01549 [Bacteroides sp. 3_1_40A]
          Length = 147

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N L+     S+  I    V +R I+Q  L   A+ IIL HNHPSGN   S +D 
Sbjct: 51  MFLNQANRLLGLSCISKCGISQTVVDVRIILQTALLAHASGIILSHNHPSGNMVASSSDN 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      L+I + DHII+    ++S+    ++
Sbjct: 111 AITSKLKKACEILDITLLDHIILSDTGYLSYADEGML 147


>gi|301027702|ref|ZP_07191015.1| DNA repair protein RadC domain protein [Escherichia coli MS
          196-1]
 gi|299879172|gb|EFI87383.1| DNA repair protein RadC domain protein [Escherichia coli MS
          196-1]
          Length = 80

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 30/80 (37%), Positives = 50/80 (62%)

Query: 18 GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
          GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD  +T+ ++  L  ++I V
Sbjct: 1  GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALALVDIRV 60

Query: 78 HDHIIIGKDAFVSFKGLRII 97
           DH+I+G +   SF    ++
Sbjct: 61 PDHLIVGGNQVFSFAEHGLL 80


>gi|262371119|ref|ZP_06064441.1| DNA repair protein [Acinetobacter johnsonii SH046]
 gi|262314005|gb|EEY95050.1| DNA repair protein [Acinetobacter johnsonii SH046]
          Length = 235

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD H   I  +    G ++   + I ++++ C+   AT +++ HNHP G   PS ADI
Sbjct: 131 LCLDAHLRKINFKKLFFGAVNSCEISINQLLRYCIAQHATFMVIAHNHPLGKAQPSTADI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+     ++I + DH I+  +   SF    +I
Sbjct: 191 ELTERILQASQLVDIQLIDHFILSPEGAFSFAEHGLI 227


>gi|227499946|ref|ZP_03930039.1| DNA repair protein RadC [Anaerococcus tetradius ATCC 35098]
 gi|227218055|gb|EEI83328.1| DNA repair protein RadC [Anaerococcus tetradius ATCC 35098]
          Length = 228

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/95 (45%), Positives = 60/95 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N++IA +  S G +    V  RE+ ++ ++ SA S+I+VHNHPSGNPNPS  D 
Sbjct: 132 ILLDTKNVIIAKDFVSMGDLSSTIVNPREVFKKAIKKSAKSMIIVHNHPSGNPNPSREDF 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ +  +   L+I V DHIIIGKD F SFK   
Sbjct: 192 AITKRLADSGELLDIEVLDHIIIGKDCFYSFKKEG 226


>gi|313672322|ref|YP_004050433.1| DNA repair protein radc [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939078|gb|ADR18270.1| DNA repair protein RadC [Calditerrivibrio nitroreducens DSM 19672]
          Length = 222

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+    +I  EV   GT++   V++RE+ +  L+  A  +I+ HNHPSG   PS  D 
Sbjct: 126 ILLNSAGNVIDWEVLFNGTVNCSQVHVREVAEYALKNKAVGVIVAHNHPSGKLEPSKDDR 185

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T  I   L+  +I + DH+++    ++SFK  
Sbjct: 186 EITIKIKKALDLFDINLLDHVLVTPYGYLSFKER 219


>gi|282879368|ref|ZP_06288111.1| putative DNA repair protein RadC [Prevotella buccalis ATCC 35310]
 gi|281298481|gb|EFA90907.1| putative DNA repair protein RadC [Prevotella buccalis ATCC 35310]
          Length = 249

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 47/97 (48%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L ++++  LI     S G I    V +R I++  +  +AT + L HNHPS N  PS  D 
Sbjct: 153 LLMNQNFKLIKSVRISHGGISETAVDVRVIMREAVLCNATVLALCHNHPSNNTTPSSDDD 212

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      + I   DHIII    + S++    +
Sbjct: 213 RLTKRVKQAAETMRIYFLDHIIITDGRYYSYREEGRL 249


>gi|325280908|ref|YP_004253450.1| DNA repair protein RadC [Odoribacter splanchnicus DSM 20712]
 gi|324312717|gb|ADY33270.1| DNA repair protein RadC [Odoribacter splanchnicus DSM 20712]
          Length = 238

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +   E  S G +D   + +R + +  L++ AT I++ HNHP G+  PS  D 
Sbjct: 135 IYLTHSNQVKGCECLSSGGMDGTVIDVRLLFRGALDMKATYIVIAHNHPGGSLVPSTYDE 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      L+I ++DHII+G++A+ SF     +
Sbjct: 195 LITRKIYEGGQLLDIKLYDHIIVGENAYYSFADEGKL 231


>gi|227529675|ref|ZP_03959724.1| DNA repair protein RadC [Lactobacillus vaginalis ATCC 49540]
 gi|227350465|gb|EEJ40756.1| DNA repair protein RadC [Lactobacillus vaginalis ATCC 49540]
          Length = 212

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 1   LFL---DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSD 57
           L+L   D HN +I  +    G +    VY   + +R L  SA  I +VHNHPSGN  PS 
Sbjct: 105 LYLVGTDVHNDIIDIKKMFVGGLSECSVYPDRVFRRALLQSANGIAVVHNHPSGNVEPSS 164

Query: 58  ADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           ADI M + +      L I   D +I+G++++ S++  
Sbjct: 165 ADIAMIKRLEKGSRILGITFLDFLIVGRNSYYSWREN 201


>gi|225378107|ref|ZP_03755328.1| hypothetical protein ROSEINA2194_03767 [Roseburia inulinivorans DSM
           16841]
 gi|225210108|gb|EEG92462.1| hypothetical protein ROSEINA2194_03767 [Roseburia inulinivorans DSM
           16841]
          Length = 230

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 45/96 (46%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
             D     + D V + G++    V  REI    LE  A  I++VHNHPSG   PS  D  
Sbjct: 134 MFDSKCKWLGDSVVTTGSVSSSIVPPREIFICALEKKAVHIVMVHNHPSGRAVPSGEDNT 193

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T  I      L I + DHIIIG   + S++    +
Sbjct: 194 VTARIAEAGKLLGIALSDHIIIGDRTYFSYREAGYL 229


>gi|50086129|ref|YP_047639.1| DNA repair protein, associated with replication forks
           [Acinetobacter sp. ADP1]
 gi|54036221|sp|Q6F7Z8|Y3126_ACIAD RecName: Full=UPF0758 protein ACIAD3126
 gi|49532105|emb|CAG69817.1| DNA repair protein, associated with replication forks
           [Acinetobacter sp. ADP1]
          Length = 271

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 46/97 (47%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G+++   + I   ++  L+  A  I++ HNHP G   PS AD+
Sbjct: 146 LCLDSELRKLNFKKLFYGSLNACNISINHTLRYALQQHACHIVIAHNHPFGKAEPSAADL 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +      + I + DH II KD   SF    ++
Sbjct: 206 DLTHQLYQACQLVEIKLLDHFIIAKDGTFSFAERALL 242


>gi|301061025|ref|ZP_07201822.1| DNA repair protein RadC domain protein [delta proteobacterium
           NaphS2]
 gi|300444819|gb|EFK08787.1| DNA repair protein RadC domain protein [delta proteobacterium
           NaphS2]
          Length = 169

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N ++  E    GT+    VY REI++R L L A +++LVHNHPS +  PS  D 
Sbjct: 61  IFLDIRNHILGIEKMFTGTLSSSAVYPREIIKRLLALKAGAVVLVHNHPSRHTEPSGEDR 120

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++ ++HDHII+G D + SF    I+
Sbjct: 121 VLTRKVALALTAVDALLHDHIIVGDD-YYSFSEKGIM 156


>gi|303241972|ref|ZP_07328465.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2]
 gi|302590527|gb|EFL60282.1| DNA repair protein RadC [Acetivibrio cellulolyticus CD2]
          Length = 142

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 53/95 (55%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L  +N++   +  S GT+   PV+ RE+ +  +  ++ +II+ HNHP G  NPS ADI +
Sbjct: 48  LGTNNVINCVQTVSIGTLSEAPVHPREVFKIAILSNSLNIIIAHNHPGGTLNPSKADIEL 107

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ I      L+I V DHII+    + SF    ++
Sbjct: 108 TEEIKKAGELLHIPVIDHIIVTDTNYYSFAENGLL 142


>gi|117923573|ref|YP_864190.1| DNA repair protein RadC [Magnetococcus sp. MC-1]
 gi|117607329|gb|ABK42784.1| DNA repair protein RadC [Magnetococcus sp. MC-1]
          Length = 241

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    L+   + + GTI    V+ R++V+  +   A  +IL HNHPSGNP  S  DI
Sbjct: 139 LCLDAQCRLLFPALVTEGTIRQAHVHPRQVVELVIRHKAAHVILAHNHPSGNPKASQDDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T +++  LNP+++ V DH+II  +   SF    ++
Sbjct: 199 LLTSHLMQALNPIDVQVLDHLIIAGEKVFSFASAGMM 235


>gi|302339965|ref|YP_003805171.1| DNA repair protein RadC [Spirochaeta smaragdinae DSM 11293]
 gi|301637150|gb|ADK82577.1| DNA repair protein RadC [Spirochaeta smaragdinae DSM 11293]
          Length = 227

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 30/92 (32%), Positives = 49/92 (53%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  + +I   + S G ++   V+ REI   C++  A ++I  HNHPSGN  PS  D  +
Sbjct: 131 LNGAHEVIKLRIISVGLVNRTLVHPREIFAGCVKDRAAALICAHNHPSGNLQPSAEDHEV 190

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           T+ +  +   L I + DHII  ++ + SF   
Sbjct: 191 TRRLTASGEILGIPLIDHIIFTQEGYYSFLEH 222


>gi|197105875|ref|YP_002131252.1| DNA repair protein RadC [Phenylobacterium zucineum HLK1]
 gi|196479295|gb|ACG78823.1| DNA repair protein RadC [Phenylobacterium zucineum HLK1]
          Length = 256

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 61/97 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD      +DE   RGT+DH PVY+RE+++  L   A +++LVHNHPSG+P PS AD+
Sbjct: 159 IFLDASGAWSSDEELGRGTVDHAPVYVREVMREALRRDAAALVLVHNHPSGDPTPSAADV 218

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I    + L + V DH+++G     SF+ L ++
Sbjct: 219 QVTSEIAAAASALGMSVKDHLVVGSHGVASFQALGLL 255


>gi|312134462|ref|YP_004001800.1| DNA repair protein radc [Caldicellulosiruptor owensensis OL]
 gi|311774513|gb|ADQ04000.1| DNA repair protein RadC [Caldicellulosiruptor owensensis OL]
          Length = 230

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    +I       GT+    VY R++V+  +  +A+S+IL HNHP G+  PS  DI
Sbjct: 129 ICLDTQLNVIYSAPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSIRPSMDDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             TQ I+  L+ + + V+DH I+  D + SF    I+
Sbjct: 189 KTTQKIVNALSTIGVAVNDHFIVAGDKYYSFAQNGIL 225


>gi|262281059|ref|ZP_06058841.1| DNA repair protein [Acinetobacter calcoaceticus RUH2202]
 gi|262257290|gb|EEY76026.1| DNA repair protein [Acinetobacter calcoaceticus RUH2202]
          Length = 239

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 47/97 (48%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G++ H  V + + ++  L+  A  +++ HNHP G+  PS  DI
Sbjct: 135 LCLDPELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSAQPSAEDI 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I + DH II  +   SF   +++
Sbjct: 195 ALTQQLEHACQLVEIRLLDHFIISPEGSFSFAEQQLL 231


>gi|220919048|ref|YP_002494352.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956902|gb|ACL67286.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 235

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 48/95 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    L+     + G++   PV  R+ ++  +   A  ++ VHNHPSG+P PS  D+
Sbjct: 137 VLLDVRGRLLRAVQVAEGSLSQCPVSPRDALRPAVREGAHGVVFVHNHPSGDPTPSPDDV 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           ++T  +    + + ++  DH+I+    + SF    
Sbjct: 197 DLTARLRAAADLVGVLARDHVIVAAGGYYSFVEAG 231


>gi|254196814|ref|ZP_04903238.1| DNA repair protein RadC [Burkholderia pseudomallei S13]
 gi|169653557|gb|EDS86250.1| DNA repair protein RadC [Burkholderia pseudomallei S13]
          Length = 283

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 187 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 246

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G     SF     I
Sbjct: 247 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 283


>gi|301029681|ref|ZP_07192738.1| DNA repair protein RadC domain protein [Escherichia coli MS
          196-1]
 gi|299877451|gb|EFI85662.1| DNA repair protein RadC domain protein [Escherichia coli MS
          196-1]
          Length = 80

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 30/80 (37%), Positives = 50/80 (62%)

Query: 18 GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
          GTI+   V+ RE+++R L  +A +++L HNHPSG   PS AD  +T+ ++  L  ++I V
Sbjct: 1  GTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRV 60

Query: 78 HDHIIIGKDAFVSFKGLRII 97
           DH+I+G +   SF    ++
Sbjct: 61 PDHLIVGGNQVFSFAEHGLL 80


>gi|86159682|ref|YP_466467.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776193|gb|ABC83030.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 203

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 49/95 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    LI  E  ++G++   PV  R+ ++  +   A  ++ VHNHPSG+P+ S  D 
Sbjct: 106 VLLDVRGRLIRTERVAQGSVSQCPVSPRDTLRVAVREGAHGVVFVHNHPSGDPSASVEDA 165

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           ++T+ +      + ++  DH+I+    + SF    
Sbjct: 166 DLTERLTAAAELVGVVARDHVIVATGGYFSFVQAG 200


>gi|56750332|ref|YP_171033.1| DNA repair protein RadC [Synechococcus elongatus PCC 6301]
 gi|81300036|ref|YP_400244.1| DNA repair protein RadC [Synechococcus elongatus PCC 7942]
 gi|56685291|dbj|BAD78513.1| DNA repair protein RadC [Synechococcus elongatus PCC 6301]
 gi|81168917|gb|ABB57257.1| DNA repair protein RadC [Synechococcus elongatus PCC 7942]
          Length = 244

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/93 (36%), Positives = 52/93 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + L+A  V + GT        REI +  L L AT +I+ HNHPSG  +PS AD+
Sbjct: 140 LLLDVRHNLLAQRVLTIGTATETLANPREIFREALRLGATRLIVAHNHPSGQVDPSSADL 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           ++T+ ++     L + V DH+I+G+    S + 
Sbjct: 200 SLTEQLLQLGQALELPVLDHLILGQGHHRSLRD 232


>gi|110637898|ref|YP_678105.1| DNA repair protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110280579|gb|ABG58765.1| DNA replication and repair protein RadC [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 233

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 47/97 (48%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N +      S G +    V  + I +  LE  A+ IIL+HNHPSGN  PS +D 
Sbjct: 137 LLLNCDNRIEKKIRISTGGVSATIVDPKLIYKYALENLASYIILIHNHPSGNTKPSQSDY 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ +      L   V DH+II    + SF     I
Sbjct: 197 NLTKKLCEAGAFLETPVLDHVIICNHTWYSFADEGKI 233


>gi|325280673|ref|YP_004253215.1| DNA repair protein RadC [Odoribacter splanchnicus DSM 20712]
 gi|324312482|gb|ADY33035.1| DNA repair protein RadC [Odoribacter splanchnicus DSM 20712]
          Length = 165

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+    +I     S+G ++H  V +R I Q  L   AT  ILVHNHP+G  +PS  D 
Sbjct: 68  ILLNSCMQIIGSSQVSKGGLEHAFVDVRIIYQTALMAHATGFILVHNHPTGVLHPSKPDE 127

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I+     L+I + DH+II +D + SF    II
Sbjct: 128 ELTKKIVGAGKILDIRLLDHLIISEDTYFSFADEGII 164


>gi|307718970|ref|YP_003874502.1| DNA repair protein RadC [Spirochaeta thermophila DSM 6192]
 gi|306532695|gb|ADN02229.1| DNA repair protein RadC [Spirochaeta thermophila DSM 6192]
 gi|315186457|gb|EFU20217.1| DNA repair protein RadC [Spirochaeta thermophila DSM 6578]
          Length = 218

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 47/95 (49%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+    LIA  V S G ++    + RE+    +   A SII+ HNHPSG+  PS  D  +
Sbjct: 124 LNGAQELIALRVVSVGLVNRALTHPREVFADPIADRAASIIVAHNHPSGSLTPSVEDQEV 183

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +      L I + DHI+  +  ++S K    +
Sbjct: 184 TRRLKEAGEILGIPLLDHIVFSQKGYLSLKQAGYL 218


>gi|262377394|ref|ZP_06070617.1| DNA repair protein [Acinetobacter lwoffii SH145]
 gi|262307624|gb|EEY88764.1| DNA repair protein [Acinetobacter lwoffii SH145]
          Length = 232

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     IA +    G+I+   + I ++++  +   ATSI++ HNHP G P+PS AD+
Sbjct: 130 LCLDASLRKIAFKKLFYGSINACDISINQLLRYAISQQATSIVIAHNHPLGRPSPSKADL 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ I      ++I + DH II  +   SF   ++I
Sbjct: 190 VLTRQIQQACQLVDIHLIDHCIIALEGSFSFAEQQLI 226


>gi|53718558|ref|YP_107544.1| DNA repair protein RadC [Burkholderia pseudomallei K96243]
 gi|251766710|ref|ZP_04819773.1| DNA repair protein RadC [Burkholderia mallei PRL-20]
 gi|52208972|emb|CAH34911.1| putative DNA repair protein [Burkholderia pseudomallei K96243]
 gi|243064993|gb|EES47179.1| DNA repair protein RadC [Burkholderia mallei PRL-20]
          Length = 236

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 140 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G     SF     I
Sbjct: 200 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 236


>gi|197124274|ref|YP_002136225.1| DNA repair protein RadC [Anaeromyxobacter sp. K]
 gi|196174123|gb|ACG75096.1| DNA repair protein RadC [Anaeromyxobacter sp. K]
          Length = 235

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 49/95 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    L+     + G++   PV  R+ ++  +   A  ++ VHNHPSG+P+PS  D+
Sbjct: 137 VLLDVRGRLLRAVQVAEGSLSQCPVSPRDALRPAVREGAHGVVFVHNHPSGDPSPSPDDM 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           ++T  +    + + ++  DH+I+    + SF    
Sbjct: 197 DLTARLRAAADLVGVLARDHVIVAAGGYYSFVEAG 231


>gi|288925176|ref|ZP_06419111.1| DNA repair protein RadC [Prevotella buccae D17]
 gi|315607385|ref|ZP_07882384.1| DNA repair protein RadC [Prevotella buccae ATCC 33574]
 gi|288337941|gb|EFC76292.1| DNA repair protein RadC [Prevotella buccae D17]
 gi|315250942|gb|EFU30932.1| DNA repair protein RadC [Prevotella buccae ATCC 33574]
          Length = 255

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L ++++  LI  +  S G I    + +R IV+  L  +AT +   HNHPS N  PS  D 
Sbjct: 159 LLMNQNYKLIKAQRISHGGISETAIDVRIIVKEALLCNATILAFCHNHPSNNTTPSRQDD 218

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQN+    + + I + DH+I+   A+ S++    I
Sbjct: 219 QLTQNVKKACDFMRIYLIDHVIVTDGAYYSYREQGRI 255


>gi|53726241|ref|YP_103794.1| DNA repair protein RadC [Burkholderia mallei ATCC 23344]
 gi|76809094|ref|YP_332551.1| DNA repair protein RadC [Burkholderia pseudomallei 1710b]
 gi|121598892|ref|YP_993943.1| DNA repair protein RadC [Burkholderia mallei SAVP1]
 gi|124383479|ref|YP_001027007.1| DNA repair protein RadC [Burkholderia mallei NCTC 10229]
 gi|126449373|ref|YP_001081630.1| DNA repair protein RadC [Burkholderia mallei NCTC 10247]
 gi|126455030|ref|YP_001065265.1| DNA repair protein RadC [Burkholderia pseudomallei 1106a]
 gi|134281216|ref|ZP_01767925.1| DNA repair protein RadC [Burkholderia pseudomallei 305]
 gi|217419932|ref|ZP_03451438.1| DNA repair protein RadC [Burkholderia pseudomallei 576]
 gi|226194411|ref|ZP_03790009.1| DNA repair protein RadC [Burkholderia pseudomallei Pakistan 9]
 gi|238562657|ref|ZP_00440036.2| DNA repair protein RadC [Burkholderia mallei GB8 horse 4]
 gi|242316183|ref|ZP_04815199.1| DNA repair protein RadC [Burkholderia pseudomallei 1106b]
 gi|254175496|ref|ZP_04882156.1| DNA repair protein RadC [Burkholderia mallei ATCC 10399]
 gi|254190872|ref|ZP_04897379.1| DNA repair protein RadC [Burkholderia pseudomallei Pasteur 52237]
 gi|254202496|ref|ZP_04908859.1| DNA repair protein RadC [Burkholderia mallei FMH]
 gi|254207831|ref|ZP_04914181.1| DNA repair protein RadC [Burkholderia mallei JHU]
 gi|254356274|ref|ZP_04972550.1| DNA repair protein RadC [Burkholderia mallei 2002721280]
 gi|81604404|sp|Q62HM6|Y2230_BURMA RecName: Full=UPF0758 protein BMA2230
 gi|123599994|sp|Q3JV52|Y1139_BURP1 RecName: Full=UPF0758 protein BURPS1710b_1139
 gi|171769294|sp|A1V6U0|Y4446_BURMS RecName: Full=UPF0758 protein BMASAVP1_A2646
 gi|171769824|sp|A2S4Y8|Y3320_BURM9 RecName: Full=UPF0758 protein BMA10229_A1020
 gi|171855041|sp|A3MMZ4|Y4599_BURM7 RecName: Full=UPF0758 protein BMA10247_2099
 gi|171855119|sp|A3NSE4|Y984_BURP0 RecName: Full=UPF0758 protein BURPS1106A_0984
 gi|52429664|gb|AAU50257.1| DNA repair protein RadC [Burkholderia mallei ATCC 23344]
 gi|76578547|gb|ABA48022.1| DNA repair protein RadC [Burkholderia pseudomallei 1710b]
 gi|121227702|gb|ABM50220.1| DNA repair protein RadC [Burkholderia mallei SAVP1]
 gi|124291499|gb|ABN00768.1| DNA repair protein RadC [Burkholderia mallei NCTC 10229]
 gi|126228672|gb|ABN92212.1| DNA repair protein RadC [Burkholderia pseudomallei 1106a]
 gi|126242243|gb|ABO05336.1| DNA repair protein RadC [Burkholderia mallei NCTC 10247]
 gi|134247522|gb|EBA47607.1| DNA repair protein RadC [Burkholderia pseudomallei 305]
 gi|147746743|gb|EDK53820.1| DNA repair protein RadC [Burkholderia mallei FMH]
 gi|147751725|gb|EDK58792.1| DNA repair protein RadC [Burkholderia mallei JHU]
 gi|148025271|gb|EDK83425.1| DNA repair protein RadC [Burkholderia mallei 2002721280]
 gi|157938547|gb|EDO94217.1| DNA repair protein RadC [Burkholderia pseudomallei Pasteur 52237]
 gi|160696540|gb|EDP86510.1| DNA repair protein RadC [Burkholderia mallei ATCC 10399]
 gi|217397236|gb|EEC37252.1| DNA repair protein RadC [Burkholderia pseudomallei 576]
 gi|225933496|gb|EEH29485.1| DNA repair protein RadC [Burkholderia pseudomallei Pakistan 9]
 gi|238522151|gb|EEP85597.1| DNA repair protein RadC [Burkholderia mallei GB8 horse 4]
 gi|242139422|gb|EES25824.1| DNA repair protein RadC [Burkholderia pseudomallei 1106b]
          Length = 278

 Score =  107 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 182 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 241

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G     SF     I
Sbjct: 242 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 278


>gi|257139989|ref|ZP_05588251.1| DNA repair protein RadC [Burkholderia thailandensis E264]
          Length = 267

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 171 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 230

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ + DH ++G +   SF     I
Sbjct: 231 HLTRVLRDALALVDVQLIDHFVVGANDTFSFAQAGWI 267


>gi|83719104|ref|YP_441337.1| DNA repair protein RadC [Burkholderia thailandensis E264]
 gi|123537846|sp|Q2T0G2|Y781_BURTA RecName: Full=UPF0758 protein BTH_I0781
 gi|83652929|gb|ABC36992.1| DNA repair protein RadC [Burkholderia thailandensis E264]
          Length = 262

 Score =  107 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 166 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 225

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ + DH ++G +   SF     I
Sbjct: 226 HLTRVLRDALALVDVQLIDHFVVGANDTFSFAQAGWI 262


>gi|86160242|ref|YP_467027.1| DNA repair protein RadC [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776753|gb|ABC83590.1| DNA replication and repair protein RadC [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 235

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 48/95 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    L+     + G++   PV  R+ ++  +   A  ++ VHNHPSG+P PS  D+
Sbjct: 137 VLLDVRGRLLRAVQVAEGSLSQCPVSPRDALRPAVREGAHGVVFVHNHPSGDPTPSPDDV 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           ++T  +    + + ++  DH+I+    + SF    
Sbjct: 197 DLTARLRAAADLVGVLARDHVIVAAGGYYSFVEAG 231


>gi|167893197|ref|ZP_02480599.1| DNA repair protein RadC [Burkholderia pseudomallei 7894]
          Length = 172

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 76  LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 135

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G     SF     I
Sbjct: 136 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 172


>gi|237811181|ref|YP_002895632.1| DNA repair protein RadC [Burkholderia pseudomallei MSHR346]
 gi|254181484|ref|ZP_04888081.1| DNA repair protein RadC [Burkholderia pseudomallei 1655]
 gi|184212022|gb|EDU09065.1| DNA repair protein RadC [Burkholderia pseudomallei 1655]
 gi|237504391|gb|ACQ96709.1| DNA repair protein RadC [Burkholderia pseudomallei MSHR346]
          Length = 280

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 184 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 243

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G     SF     I
Sbjct: 244 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 280


>gi|228969931|ref|ZP_04130654.1| DNA repair protein RadC [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228789792|gb|EEM37651.1| DNA repair protein RadC [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 154

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N ++A      G+++   V+ R++ +  +  ++ SI++ H HPSG   PSDAD 
Sbjct: 56  MCLNTQNEVVAVHRCHVGSLNSSVVHPRDVFKSAILNNSFSIVVAHQHPSGMVLPSDADK 115

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97
           ++++ +      + I V D +I+     F S +    +
Sbjct: 116 DVSKRLYDAGKLIGIEVLDSLIVNDAGRFYSLREKGYL 153


>gi|126441393|ref|YP_001058030.1| DNA repair protein RadC [Burkholderia pseudomallei 668]
 gi|171855114|sp|A3N6Q9|Y979_BURP6 RecName: Full=UPF0758 protein BURPS668_0979
 gi|126220886|gb|ABN84392.1| DNA repair protein RadC [Burkholderia pseudomallei 668]
          Length = 278

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 182 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 241

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G     SF     I
Sbjct: 242 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 278


>gi|262065984|ref|ZP_06025596.1| DNA repair protein RadC [Fusobacterium periodonticum ATCC 33693]
 gi|291380341|gb|EFE87859.1| DNA repair protein RadC [Fusobacterium periodonticum ATCC 33693]
          Length = 237

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N ++A E  S GT+D   +Y REI +R +  +A SII+ HNHPSGN +PS  DI
Sbjct: 141 IYLSSSNEVLAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNISPSKCDI 200

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I   L     ++ +HIII +D++ SF    +I
Sbjct: 201 DITNEIAKGLKNFGALLIEHIIITRDSYFSFLEEGLI 237


>gi|159901512|ref|YP_001547758.1| DNA repair protein RadC [Herpetosiphon aurantiacus ATCC 23779]
 gi|159894551|gb|ABX07630.1| DNA repair protein RadC [Herpetosiphon aurantiacus ATCC 23779]
          Length = 204

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 46/94 (48%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L     +I       GT++     + ++ +  L  +A S+IL HNHPSG    S  DI +
Sbjct: 107 LSTQAHIIGMHTVVVGTLNTAYCRMADLFREPLRRNAASVILAHNHPSGMVWASPEDILL 166

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           T+  I     L I + DH+IIGK  + S +  R+
Sbjct: 167 TKQAIQAGQLLEIELLDHLIIGKGGYTSMRERRL 200


>gi|319779280|ref|YP_004130193.1| DNA repair protein RadC [Taylorella equigenitalis MCE9]
 gi|317109304|gb|ADU92050.1| DNA repair protein RadC [Taylorella equigenitalis MCE9]
          Length = 227

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 38/97 (39%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+    L   E+  +GTIDH P+Y REIV+  L   A  I++ HNHPSG   PS ADI
Sbjct: 129 LYLNYSFKLTHSEILIKGTIDHAPIYPREIVKSALRHHAAYIVMAHNHPSGRSEPSKADI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ + + L  +N+ + DHI+  +    S   L +I
Sbjct: 189 EITKKLKSALELVNVKLIDHIVCTRVEATSMAELGLI 225


>gi|282895499|ref|ZP_06303636.1| DNA repair protein RadC [Raphidiopsis brookii D9]
 gi|281199532|gb|EFA74395.1| DNA repair protein RadC [Raphidiopsis brookii D9]
          Length = 115

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 31/93 (33%), Positives = 52/93 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N  +  ++ + GT        R+I +  +   AT +I+ HNHPSGN +PS AD+
Sbjct: 11  LLLDVKNRFLGTKIITIGTATETLASPRDIFREVIRHGATRMIIAHNHPSGNLDPSQADL 70

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           ++T+ +++    LNI + DH+I+G     S + 
Sbjct: 71  DLTRQLLSGAQLLNIPILDHLILGNGNHQSLRE 103


>gi|167909900|ref|ZP_02496991.1| DNA repair protein RadC [Burkholderia pseudomallei 112]
          Length = 218

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 122 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G     SF     I
Sbjct: 182 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 218


>gi|167823105|ref|ZP_02454576.1| DNA repair protein RadC [Burkholderia pseudomallei 9]
          Length = 217

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 121 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 180

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G     SF     I
Sbjct: 181 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 217


>gi|167901650|ref|ZP_02488855.1| DNA repair protein RadC [Burkholderia pseudomallei NCTC 13177]
          Length = 216

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 120 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 179

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G     SF     I
Sbjct: 180 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 216


>gi|167814637|ref|ZP_02446317.1| DNA repair protein RadC [Burkholderia pseudomallei 91]
          Length = 215

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 119 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 178

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G     SF     I
Sbjct: 179 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 215


>gi|167844668|ref|ZP_02470176.1| DNA repair protein RadC [Burkholderia pseudomallei B7210]
          Length = 208

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 112 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 171

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G     SF     I
Sbjct: 172 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 208


>gi|154149630|ref|YP_001403248.1| DNA repair protein RadC [Candidatus Methanoregula boonei 6A8]
 gi|153998182|gb|ABS54605.1| DNA repair protein RadC [Methanoregula boonei 6A8]
          Length = 220

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 48/95 (50%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L     +I   V + G ++H  V+ RE+    +   A S++ VHNHPSG+   S  DI +
Sbjct: 126 LSGAGEVITSRVITIGILNHSLVHPREVFAGAITDRAASVVCVHNHPSGSLEASPQDIAI 185

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ +      L I + DHII+ +  F S K   +I
Sbjct: 186 TRQLQEAGALLGIQLLDHIIVTRTGFSSLKEKGLI 220


>gi|293373275|ref|ZP_06619634.1| DNA repair protein RadC [Bacteroides ovatus SD CMC 3f]
 gi|292631760|gb|EFF50379.1| DNA repair protein RadC [Bacteroides ovatus SD CMC 3f]
          Length = 202

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +F++    +I     S G ++   + IR +++  +   ATS IL HNHPSGN  PS  D 
Sbjct: 106 IFMNSSARVIKRIRISSGGLNTCLIDIRVLLKEAILCEATSFILSHNHPSGNTKPSIEDD 165

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ+  T    LNI + DH+II  D++ S+     I
Sbjct: 166 KLTQSAATAAKTLNIRMLDHVIICNDSYYSYADEGRI 202


>gi|299768777|ref|YP_003730803.1| DNA repair protein RadC [Acinetobacter sp. DR1]
 gi|298698865|gb|ADI89430.1| DNA repair protein RadC [Acinetobacter sp. DR1]
          Length = 235

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 47/97 (48%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G++ H  V + + ++  L+  A  +++ HNHP G+  PS  DI
Sbjct: 131 LCLDPELRKLHFKKLFFGSMQHCAVSVNQTLRYALQQHACQLVIAHNHPFGSAQPSAEDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I + DH II  +   SF   +++
Sbjct: 191 ALTQQLENACKLVEIHLLDHFIISPEGSFSFAEQQLL 227


>gi|296125781|ref|YP_003633033.1| DNA repair protein RadC [Brachyspira murdochii DSM 12563]
 gi|296017597|gb|ADG70834.1| DNA repair protein RadC [Brachyspira murdochii DSM 12563]
          Length = 227

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD +   I+ E   RGTID   +Y R++V++ L L ++ +I+ HNHPSG   PS  DI
Sbjct: 122 VCLDVNKKFISMEHIFRGTIDSATIYPRDLVEKSLSLGSSYVIVSHNHPSGIAKPSKEDI 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           N+T  +      ++I + DHIII  +++ SF+   +
Sbjct: 182 NITNVLYKAFKMVDIKMLDHIIIAANSYYSFREDGM 217


>gi|209526662|ref|ZP_03275186.1| DNA repair protein RadC [Arthrospira maxima CS-328]
 gi|209492898|gb|EDZ93229.1| DNA repair protein RadC [Arthrospira maxima CS-328]
          Length = 243

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L +D  N L+  ++ + GT      + R+I +  L+ +AT +I+ HNHPSGN  PS  D+
Sbjct: 139 LLMDVKNRLLGTKLLTIGTATETLAHPRDIFREVLKHNATRLIIAHNHPSGNVEPSYQDL 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ ++     L++ + DH+I+G   + S +  
Sbjct: 199 ELTRLLLEGGQLLSLPILDHLILGNGNYGSIRQK 232


>gi|167957117|ref|ZP_02544191.1| DNA repair protein RadC [candidate division TM7 single-cell isolate
           TM7c]
 gi|169836908|ref|ZP_02870096.1| DNA repair protein RadC [candidate division TM7 single-cell isolate
           TM7a]
          Length = 214

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 37/88 (42%), Positives = 49/88 (55%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N LIA  V + GT+    V+ RE+    +   A SII+ HNHPSG+   S AD ++
Sbjct: 125 LDGANRLIAKRVVTIGTLTASLVHPREVFADAIADRAASIIVAHNHPSGSLEASQADKDV 184

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVS 90
           T  +      L I ++DHIII K  FVS
Sbjct: 185 TSRLAEAGRLLGITLNDHIIITKTDFVS 212


>gi|328948862|ref|YP_004366199.1| DNA repair protein RadC [Treponema succinifaciens DSM 2489]
 gi|328449186|gb|AEB14902.1| DNA repair protein RadC [Treponema succinifaciens DSM 2489]
          Length = 223

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 50/94 (53%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           +    +++  V S GTI+   ++ RE+    +   A+ II  HNHP G   PS+ADI+ T
Sbjct: 130 NGAKEILSTRVVSVGTINKALIHPREVFANAVSEYASGIICCHNHPCGQCYPSNADIDST 189

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + +      L I+  DHIII K+ + SF    ++
Sbjct: 190 KILQKAAKILGIVFMDHIIITKEDYFSFLEHGML 223


>gi|302037820|ref|YP_003798142.1| DNA repair protein RadC-like protein [Candidatus Nitrospira
           defluvii]
 gi|300605884|emb|CBK42217.1| DNA repair protein RadC homolog [Candidatus Nitrospira defluvii]
          Length = 220

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 33/94 (35%), Positives = 51/94 (54%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           +  N ++   V + G ID  PV+ RE+    +   A++II+ HNHP+G+  PS ADI +T
Sbjct: 127 NGANEILNIRVVTIGLIDQTPVHPREVFAEAVSDRASAIIVAHNHPAGSLQPSTADIEIT 186

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           Q I      L I + DHII  + ++ SF     +
Sbjct: 187 QKIKNAGLTLGIELLDHIIFNRQSYYSFLEDGKL 220


>gi|42520476|ref|NP_966391.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58697545|ref|ZP_00372786.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58698969|ref|ZP_00373824.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58699197|ref|ZP_00374008.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630364|ref|YP_002727155.1| DNA repair protein RadC, putative [Wolbachia sp. wRi]
 gi|225630758|ref|YP_002727549.1| DNA repair protein RadC, putative [Wolbachia sp. wRi]
 gi|42410215|gb|AAS14325.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58534284|gb|EAL58472.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534509|gb|EAL58653.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58535974|gb|EAL59696.1| DNA repair protein RadC, truncation [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225592345|gb|ACN95364.1| DNA repair protein RadC, putative [Wolbachia sp. wRi]
 gi|225592739|gb|ACN95758.1| DNA repair protein RadC, putative [Wolbachia sp. wRi]
          Length = 218

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   LI +E    G ++  PVYI+EI ++ L  +ATSII+ HNHP G+  PS+ D 
Sbjct: 123 LYLNKRRQLIGEES-YIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSEEDQ 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++    + +++ + DHIII    + SF+   ++
Sbjct: 182 AVTKSLAAACSTVSVKLFDHIIITSGGYFSFRENGLL 218


>gi|27262222|gb|AAN87392.1| DNA repair protein RadC [Heliobacillus mobilis]
          Length = 216

 Score =  106 bits (266), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 49/81 (60%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +++ E  S G++    V+ RE+ +  +  SA +++L+HNHPSG+P PS  D  +
Sbjct: 135 LNTKNQVLSIEDISVGSLSSSIVHPRELFKALIRKSAAAVVLLHNHPSGDPTPSREDREI 194

Query: 63  TQNIITTLNPLNIIVHDHIII 83
           T+ I+     L I V DH+I+
Sbjct: 195 TRRIVEAGRILGIEVLDHVIV 215


>gi|256847982|ref|ZP_05553426.1| DNA repair protein RadC [Lactobacillus coleohominis 101-4-CHN]
 gi|256715042|gb|EEU30019.1| DNA repair protein RadC [Lactobacillus coleohominis 101-4-CHN]
          Length = 112

 Score =  106 bits (266), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 31/93 (33%), Positives = 49/93 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  D HN +IA +    G      +Y  +I +  L+  A  +I+VHNHP+G   PSD D+
Sbjct: 15  LCTDVHNEIIARQQLFIGGRSQCSLYPDQIFRYALKNCAAGVIIVHNHPTGYSEPSDNDL 74

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            M Q +    N + I + D +IIG + + S++ 
Sbjct: 75  MMCQRLERAGNLIGIQLIDFLIIGHNKYYSWRE 107


>gi|160888055|ref|ZP_02069058.1| hypothetical protein BACUNI_00463 [Bacteroides uniformis ATCC 8492]
 gi|270295580|ref|ZP_06201781.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317478564|ref|ZP_07937721.1| DNA repair protein RadC [Bacteroides sp. 4_1_36]
 gi|156862554|gb|EDO55985.1| hypothetical protein BACUNI_00463 [Bacteroides uniformis ATCC 8492]
 gi|270274827|gb|EFA20688.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905205|gb|EFV27002.1| DNA repair protein RadC [Bacteroides sp. 4_1_36]
          Length = 228

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L ++    +I     SRG ID     +R I++  L   AT I L+HNHPSGNP+PS+ D 
Sbjct: 132 LLMNHAAKVIDKVRISRGGIDQTTADVRSILREALLQRATQIALIHNHPSGNPHPSNDDQ 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      +NI + DH+I+   +  SF    ++
Sbjct: 192 RLTELVRKAAQTMNIHLTDHVIVTDGSHYSFNDEGLL 228


>gi|167718469|ref|ZP_02401705.1| DNA repair protein RadC [Burkholderia pseudomallei DM98]
          Length = 203

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 107 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 166

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G     SF     I
Sbjct: 167 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 203


>gi|167737518|ref|ZP_02410292.1| DNA repair protein RadC [Burkholderia pseudomallei 14]
          Length = 199

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 103 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 162

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  ++I + DH ++G     SF     I
Sbjct: 163 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 199


>gi|19704244|ref|NP_603806.1| DNA repair protein radC [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|25009025|sp|Q8RF15|Y909_FUSNN RecName: Full=UPF0758 protein FN0909
 gi|19714474|gb|AAL95105.1| DNA repair protein radC [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 232

 Score =  106 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI ++ + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L     ++ +HIII K+++ SF    +I
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232


>gi|237744553|ref|ZP_04575034.1| DNA repair protein radC [Fusobacterium sp. 7_1]
 gi|229431782|gb|EEO41994.1| DNA repair protein radC [Fusobacterium sp. 7_1]
          Length = 232

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI +R + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSTGTLDRSSVYPREIYKRVINLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L     ++ +HIII K+++ SF    +I
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232


>gi|260494432|ref|ZP_05814562.1| DNA repair protein radC [Fusobacterium sp. 3_1_33]
 gi|260197594|gb|EEW95111.1| DNA repair protein radC [Fusobacterium sp. 3_1_33]
          Length = 232

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI +R + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSTGTLDRSSVYPREIYKRVINLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L     ++ +HIII K+++ SF    +I
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232


>gi|167917922|ref|ZP_02505013.1| DNA repair protein RadC [Burkholderia pseudomallei BCC215]
          Length = 214

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 118 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  ++I + DH ++G     SF     I
Sbjct: 178 HLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 214


>gi|317504084|ref|ZP_07962086.1| DNA repair protein RadC [Prevotella salivae DSM 15606]
 gi|315664756|gb|EFV04421.1| DNA repair protein RadC [Prevotella salivae DSM 15606]
          Length = 234

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++H  LI     S G I    V +R I++  L  +AT ++L HNHPS +  PS +D 
Sbjct: 138 MLLNQHYKLIKAMAISHGGITETAVDVRVILKEALLCNATVLVLAHNHPSNHIQPSKSDD 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I   DH+I+    + S+     +
Sbjct: 198 QLTQRVKKACEAVRIYFLDHVIVTDGTYYSYHDSGRL 234


>gi|291522255|emb|CBK80548.1| DNA replication and repair protein RadC [Coprococcus catus GD/7]
          Length = 234

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/91 (36%), Positives = 53/91 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    +I++ + ++GT++   +  REI  + L+  A SI+LVHNHPSG+  PS  D+
Sbjct: 138 MMLDTKQHMISECLLTKGTVNASLIAPREIFIQALKAGAVSIVLVHNHPSGDDTPSREDL 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
             T+ + +    + I + DHIIIG   F S 
Sbjct: 198 AATEKVRSAGELIGIRLIDHIIIGSGHFTSL 228


>gi|296328881|ref|ZP_06871392.1| DNA repair protein RadC [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296154002|gb|EFG94809.1| DNA repair protein RadC [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 232

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI ++ + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L     ++ +HIII K+++ SF    +I
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232


>gi|167580122|ref|ZP_02372996.1| DNA repair protein RadC [Burkholderia thailandensis TXDOH]
          Length = 212

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 116 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 175

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +   L  +++ + DH ++G +   SF     I
Sbjct: 176 RLTRVLRDALALVDVQLIDHFVVGANDTFSFAQAGWI 212


>gi|294012615|ref|YP_003546075.1| DNA repair protein RadC [Sphingobium japonicum UT26S]
 gi|292675945|dbj|BAI97463.1| DNA repair protein RadC [Sphingobium japonicum UT26S]
          Length = 275

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF +     IADE    GT  HV + + E+V+  +   +  ++  HNHPSG P PS AD+
Sbjct: 179 LFFNDACDAIADERIWPGTSTHVELPLGELVRHAIACGSPRLLFAHNHPSGAPQPSRADV 238

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ ++     L I VHDHII+ +    SF+    +
Sbjct: 239 EFTRRLVRICKDLQIRVHDHIIVSRHGSFSFRDRGYM 275


>gi|160890249|ref|ZP_02071252.1| hypothetical protein BACUNI_02689 [Bacteroides uniformis ATCC 8492]
 gi|317480225|ref|ZP_07939332.1| DNA repair protein RadC [Bacteroides sp. 4_1_36]
 gi|156859981|gb|EDO53412.1| hypothetical protein BACUNI_02689 [Bacteroides uniformis ATCC 8492]
 gi|316903607|gb|EFV25454.1| DNA repair protein RadC [Bacteroides sp. 4_1_36]
          Length = 196

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 45/94 (47%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           ++   +I     S G ID     IR I++  ++  A     VHNHPSGN  PS+ D  +T
Sbjct: 103 NQAGRIIKKVRISVGGIDQTSADIRLIMRVLIDTGAVQFAAVHNHPSGNSRPSNEDKRLT 162

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + +       NI + DH+II    + SF    +I
Sbjct: 163 EQLKKAAGLFNIRMIDHVIITNGGYYSFGDEGLI 196


>gi|299143817|ref|ZP_07036897.1| DNA repair protein RadC [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518302|gb|EFI42041.1| DNA repair protein RadC [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 240

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 51/95 (53%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+    +   +  S+G I+   V+ RE+ +  ++  A +IIL+HNHPSG+P PS  D  +
Sbjct: 146 LNTKKEIENIKCISKGIINATLVHPREVFKTAIDERAHTIILLHNHPSGDPTPSREDFEL 205

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T  +  T   + I V DHIIIG   + SF     I
Sbjct: 206 TDKLSGTGKVIGIEVIDHIIIGNKKYYSFLEHGKI 240


>gi|159028578|emb|CAO90580.1| radC [Microcystis aeruginosa PCC 7806]
          Length = 243

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/93 (37%), Positives = 54/93 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N LIA +V + GT     V+ REI +  ++ SAT +I+ HNHP+G+  PS  DI
Sbjct: 139 ILLDVKNQLIALKVITIGTATETLVHPREIFREVVKQSATKLIIAHNHPTGSLVPSQDDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T+ ++     L I + DH+I+G   F S + 
Sbjct: 199 LLTEQLLQGATYLAIPLLDHLILGNGNFQSLRQ 231


>gi|329911397|ref|ZP_08275501.1| DNA repair protein RadC [Oxalobacteraceae bacterium IMCC9480]
 gi|327545922|gb|EGF31022.1| DNA repair protein RadC [Oxalobacteraceae bacterium IMCC9480]
          Length = 181

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D  N LIA E   RGT+ H  VY REIV+  L  +A +++L HNHPSG   PS +D 
Sbjct: 85  LFVDVANRLIASEEMFRGTLTHASVYPREIVKAALLHNAAALLLAHNHPSGIAEPSSSDR 144

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ + + L  +++ V DH+I+  +   SF    ++
Sbjct: 145 ALTQTLKSALAMIDVKVIDHLIVAGNQVYSFAEHGML 181


>gi|324323789|gb|ADY24833.1| putative DNA repair protein RadC [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 147

 Score =  105 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N ++A      G+++   V+ R++ +  +  ++ SI++ H HPSG   PSDAD 
Sbjct: 49  MCLNTQNEVVAVHRCHVGSLNSSVVHPRDVFKGAILNNSFSIVVAHQHPSGMILPSDADK 108

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97
           ++++ +      + I V D +I+     F S +    +
Sbjct: 109 DVSKRLYDAGKLIGIEVLDSLIVNDAGRFYSLREKGYL 146


>gi|153854527|ref|ZP_01995797.1| hypothetical protein DORLON_01792 [Dorea longicatena DSM 13814]
 gi|149752836|gb|EDM62767.1| hypothetical protein DORLON_01792 [Dorea longicatena DSM 13814]
          Length = 157

 Score =  105 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%)

Query: 3   LDKHN--ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+  N   +I   + S GTI+   V  RE+ +  +  +A++II +HNHPSGN  PS  D+
Sbjct: 49  LNMKNNGQVINMNLVSVGTINASLVIPREVFKSSILANASAIIGLHNHPSGNVKPSKEDM 108

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK--DAFVSFKGLRII 97
            +T+ +      L I + DHII+G      +SF+  +++
Sbjct: 109 IVTRKLQKCGQLLGIELLDHIIVGGTNGKMLSFREEKML 147


>gi|327484356|gb|AEA78763.1| DNA repair protein RadC [Vibrio cholerae LMA3894-4]
          Length = 138

 Score =  105 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/75 (42%), Positives = 48/75 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + LI  +   RGT+D   VY RE+++  L ++A ++I  HNHPSG+P PS AD 
Sbjct: 63  LFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADR 122

Query: 61  NMTQNIITTLNPLNI 75
            +TQ +   L+ ++I
Sbjct: 123 RITQRLKDALSLVDI 137


>gi|306821365|ref|ZP_07454973.1| DNA repair protein RadC [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550583|gb|EFM38566.1| DNA repair protein RadC [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 229

 Score =  105 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD    +I D+  S G  +   +  RE+ +  +   A S+I++HNHPS NP PSD DI
Sbjct: 132 ICLDTKKHIIFDKNLSVGVANATAITAREVFKEAVLRHAVSVIVMHNHPSKNPLPSDQDI 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97
            +T+ ++     L+I + DHII G  + + SF+    I
Sbjct: 192 ALTRKLVDAGRCLDIDLTDHIIYGSVENYYSFRENNRI 229


>gi|187735725|ref|YP_001877837.1| DNA repair protein RadC [Akkermansia muciniphila ATCC BAA-835]
 gi|187425777|gb|ACD05056.1| DNA repair protein RadC [Akkermansia muciniphila ATCC BAA-835]
          Length = 246

 Score =  105 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    LI     S GT++    + R+I++  +  +A   IL HNHPSGNP PS  D 
Sbjct: 131 LLLDTKCRLIKPVEISSGTLNESIAHPRDILRPTVIHNAYGFILAHNHPSGNPAPSRTDD 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK------DAFVSF 91
            +T+ +      L +   DH+IIGK        + S+
Sbjct: 191 LLTERVRECSKLLGVRFLDHVIIGKPTETTNKNYYSY 227


>gi|300779059|ref|ZP_07088917.1| DNA repair protein RadC [Chryseobacterium gleum ATCC 35910]
 gi|300504569|gb|EFK35709.1| DNA repair protein RadC [Chryseobacterium gleum ATCC 35910]
          Length = 147

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +++++ N ++  +  S   I    V IR I+Q  L  +A S I+ HNHPSGN  PS  DI
Sbjct: 51  MYMNQANKVLGIQKISESGITSSLVDIRIIMQGALLCNAVSFIIAHNHPSGNLTPSREDI 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+TQ I      LNI + DH II      SF    I+
Sbjct: 111 NITQKIKEAAQLLNINMLDHCIITSTDSFSFSNEGIL 147


>gi|190570723|ref|YP_001975081.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019846|ref|ZP_03335648.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190356995|emb|CAQ54384.1| Putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212994594|gb|EEB55240.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 218

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   LI +E    G ++  PVYI+EI ++ L  +AT +I+ HNHP G+  PS+ D 
Sbjct: 123 LYLNKRRQLIGEES-YIGEMEKAPVYIKEITRKALIKNATLVIMSHNHPGGSLEPSEEDQ 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++    + +++ + DHIII    + SF+   ++
Sbjct: 182 EVTKSLAAACSTVSVRLFDHIIITSGGYFSFRENGLL 218


>gi|317503618|ref|ZP_07961638.1| DNA repair protein RadC [Prevotella salivae DSM 15606]
 gi|315665279|gb|EFV04926.1| DNA repair protein RadC [Prevotella salivae DSM 15606]
          Length = 228

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+ H  LI     S G +    + +R I++  L  +AT + L HNHPSG+  PS  D 
Sbjct: 132 LFLNHHYKLIKSIKLSEGGLTETAIDVRVILKEALLCNATVVALAHNHPSGSITPSLPDD 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +      + I   DHII+    + S++    +
Sbjct: 192 SITKRVQKACEAVRIYFLDHIIVTDGRYYSYRDSGRL 228


>gi|219850975|ref|YP_002465407.1| DNA repair protein RadC [Methanosphaerula palustris E1-9c]
 gi|219545234|gb|ACL15684.1| DNA repair protein RadC [Methanosphaerula palustris E1-9c]
          Length = 225

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 49/95 (51%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           ++    ++     + G ++   ++ RE     +   A S+I VHNHPSG+  PS+ D  +
Sbjct: 131 MNGAGEMVKVRTITVGLLNQSQIHPREAFADAITDRAASVIFVHNHPSGSLLPSEQDRAV 190

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ ++     L I V DH+II K  F+S K   +I
Sbjct: 191 TRQLVEAGKILGIAVLDHLIISKKGFLSMKEQGLI 225


>gi|307297496|ref|ZP_07577302.1| DNA repair protein RadC [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916756|gb|EFN47138.1| DNA repair protein RadC [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 226

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/90 (37%), Positives = 46/90 (51%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD           S G +D   ++ RE+ +  +   A +IILVHNHPSG+P+PS  D  +
Sbjct: 125 LDSKLNYRGLNTVSVGLLDSSLLHPREVYKPAISRMAAAIILVHNHPSGDPSPSKEDEGV 184

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           T  I      L I + DH+IIG   F SF 
Sbjct: 185 TSKIREAGETLGIKMLDHVIIGSGTFYSFA 214


>gi|282883116|ref|ZP_06291715.1| DNA repair protein RadC-like protein [Peptoniphilus lacrimalis
           315-B]
 gi|281296928|gb|EFA89425.1| DNA repair protein RadC-like protein [Peptoniphilus lacrimalis
           315-B]
          Length = 236

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+    +      S G I+   V+ RE+ ++ +   A SIIL+HNHP+G+P+PS  D 
Sbjct: 139 IILNTKKEIKYIREISHGIINMTVVHPREVFRQAISDGAHSIILLHNHPTGDPSPSQEDR 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T+ ++     + I + DHIIIG + F SF    I+
Sbjct: 199 NLTRRLVEVSKIVGIDICDHIIIGDNTFFSFLKEGIL 235


>gi|150003115|ref|YP_001297859.1| putative DNA repair protein [Bacteroides vulgatus ATCC 8482]
 gi|149931539|gb|ABR38237.1| putative DNA repair protein [Bacteroides vulgatus ATCC 8482]
          Length = 229

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ + +I     S G +    V +R +++  L   A ++ L HNHPSG+  PS  D 
Sbjct: 133 LLLNQASKVIDCIKISSGGLVSTAVDVRCVLREALLKRAVAMALCHNHPSGSMRPSTEDD 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++      +NI + DH+I+    F S+     I
Sbjct: 193 RLTEHLDKAAKVMNIRLIDHVILTDGKFYSYADEGKI 229


>gi|169823524|ref|YP_001691027.1| putative DNA repair protein [Finegoldia magna ATCC 29328]
 gi|167832144|dbj|BAG09059.1| putative DNA repair protein [Finegoldia magna ATCC 29328]
          Length = 166

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 7/101 (6%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +I  ++ S GT++   V+ RE+ ++ +   A SII+ HNHPS +  PS ADI
Sbjct: 63  ILLDTKNKIIGIDLVSIGTLNSSLVHPRELFRKAILAGANSIIIAHNHPSNSTEPSSADI 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-------KDAFVSFKGL 94
            M + +    + L I + D +II        K   +S +  
Sbjct: 123 AMAKRLEKCGDILGIPLLDSLIIAFDSTPEKKGRLLSMRQN 163


>gi|256845195|ref|ZP_05550653.1| DNA repair protein radC [Fusobacterium sp. 3_1_36A2]
 gi|294785500|ref|ZP_06750788.1| DNA repair protein RadC [Fusobacterium sp. 3_1_27]
 gi|256718754|gb|EEU32309.1| DNA repair protein radC [Fusobacterium sp. 3_1_36A2]
 gi|294487214|gb|EFG34576.1| DNA repair protein RadC [Fusobacterium sp. 3_1_27]
          Length = 232

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI ++ + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L     ++ +HIII K+++ SF    +I
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232


>gi|197302494|ref|ZP_03167549.1| hypothetical protein RUMLAC_01222 [Ruminococcus lactaris ATCC
           29176]
 gi|197298392|gb|EDY32937.1| hypothetical protein RUMLAC_01222 [Ruminococcus lactaris ATCC
           29176]
          Length = 168

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%)

Query: 3   LDKHN--ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+  N   +I   + S GTI+   V  RE+ +  +  +A++II +HNHPSGN  PS  D+
Sbjct: 59  LNMKNNGQVINMNLVSVGTINASLVIPREVFKSSILANASAIIGLHNHPSGNVKPSKEDM 118

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK--DAFVSFKGLRII 97
            +T+ +      L I + DHII+G      +SF+  +++
Sbjct: 119 IVTRKLQKCGQLLGIELLDHIIVGGTNGKMLSFREEKML 157


>gi|166367176|ref|YP_001659449.1| DNA repair protein RadC [Microcystis aeruginosa NIES-843]
 gi|229470320|sp|B0JTF4|Y4435_MICAN RecName: Full=UPF0758 protein MAE_44350
 gi|166089549|dbj|BAG04257.1| DNA repair protein [Microcystis aeruginosa NIES-843]
          Length = 243

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/93 (37%), Positives = 54/93 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N LIA +V + GT     V+ REI +  ++ SAT +I+ HNHP+G+  PS  DI
Sbjct: 139 ILLDVKNQLIALKVITIGTATETLVHPREIFREVVKQSATKLIIAHNHPTGSLVPSQDDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            +T+ ++     L I + DH+I+G   F S + 
Sbjct: 199 LLTEQLLQGATYLAIPLLDHLILGNGNFQSLRQ 231


>gi|212691747|ref|ZP_03299875.1| hypothetical protein BACDOR_01242 [Bacteroides dorei DSM 17855]
 gi|237708658|ref|ZP_04539139.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237724073|ref|ZP_04554554.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265755314|ref|ZP_06090084.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212665648|gb|EEB26220.1| hypothetical protein BACDOR_01242 [Bacteroides dorei DSM 17855]
 gi|229437533|gb|EEO47610.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229457358|gb|EEO63079.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263234456|gb|EEZ20046.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 229

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ + +I     S G +    V +R +++  L   A ++ L HNHPSG+  PS  D 
Sbjct: 133 LLLNQASKVIDRIKISSGGLASTAVDVRCVLREALLKRAVAMALCHNHPSGSMRPSTEDD 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++      +NI + DH+I+    F S+     +
Sbjct: 193 RLTEHLDKAAKVMNIRLIDHVILTDGKFYSYADEGRM 229


>gi|150020120|ref|YP_001305474.1| DNA repair protein RadC [Thermosipho melanesiensis BI429]
 gi|149792641|gb|ABR30089.1| DNA repair protein RadC [Thermosipho melanesiensis BI429]
          Length = 213

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+    +I+    + G ID    + RE+ +  ++ SA  I+LVHNHPSG+  PS  D 
Sbjct: 118 IMLNSKLSVISSRDITIGLIDTSLAHPREVFREAIKNSAVYIVLVHNHPSGDVTPSKNDK 177

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  +      + I + DH+IIG + F SFK  R+I
Sbjct: 178 DLTYKVKEAGEIIGIKLLDHVIIG-NGFYSFKHNRLI 213


>gi|167618186|ref|ZP_02386817.1| DNA repair protein RadC [Burkholderia thailandensis Bt4]
          Length = 209

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 113 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 172

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +   L  +++ + DH ++G +   SF     I
Sbjct: 173 HLTRVLRDALALVDVQLIDHFVVGANDTFSFAQAGWI 209


>gi|254303275|ref|ZP_04970633.1| DNA repair protein RadC [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323467|gb|EDK88717.1| DNA repair protein RadC [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 232

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 56/97 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L   N +I  E  S GT+D   VY REI ++ + L+A SIIL HNHPS N  PS  DI
Sbjct: 136 LYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKIINLNAKSIILAHNHPSDNITPSKCDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L     ++ +HIII K+++ SF    +I
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232


>gi|126657586|ref|ZP_01728741.1| DNA repair protein RadC [Cyanothece sp. CCY0110]
 gi|126621042|gb|EAZ91756.1| DNA repair protein RadC [Cyanothece sp. CCY0110]
          Length = 242

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 51/91 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    L+  +V + GT     V   EI +  L+  A ++I+ HNHPSGN  PS  D+
Sbjct: 139 VFLDSKYRLLGTKVITIGTATETLVDPAEIFRETLKQGANALIVAHNHPSGNVEPSQQDL 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ ++  +  + I + DH+I+G+    S 
Sbjct: 199 DLTEQLLQGMQLIRIPLIDHLILGEGNHCSL 229


>gi|172037408|ref|YP_001803909.1| DNA repair protein RadC [Cyanothece sp. ATCC 51142]
 gi|226713857|sp|B1WRJ4|Y2495_CYAA5 RecName: Full=UPF0758 protein cce_2495
 gi|171698862|gb|ACB51843.1| DNA repair protein radC [Cyanothece sp. ATCC 51142]
          Length = 242

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 51/91 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    L+  +V + GT     V   EI +  L+  A ++I+ HNHPSGN  PS  D+
Sbjct: 139 VFLDSKYRLLGTKVITIGTATETLVDPAEIFRETLKQGANALIVAHNHPSGNVEPSQQDL 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ ++  +  + I + DH+I+G+    S 
Sbjct: 199 DLTEQLLKGMQLIRIPLIDHLILGEGNHCSL 229


>gi|225619798|ref|YP_002721055.1| putative DNA repair protein RadC [Brachyspira hyodysenteriae WA1]
 gi|225214617|gb|ACN83351.1| putative DNA repair protein RadC [Brachyspira hyodysenteriae WA1]
          Length = 233

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD +   I+ +   RGTID   +Y R++V++ L L A+ +I+ HNHPSG   PS  DI
Sbjct: 128 ICLDVNKRFISMDHIFRGTIDSATIYPRDLVEKSLSLGASYVIISHNHPSGISKPSKEDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T+ +      ++I + DHII+  ++F SF+   +
Sbjct: 188 EITKVLYKAFLMVDIKILDHIIVAGNSFYSFREDGM 223


>gi|256027337|ref|ZP_05441171.1| DNA repair protein radC [Fusobacterium sp. D11]
 gi|289765306|ref|ZP_06524684.1| DNA repair protein radC [Fusobacterium sp. D11]
 gi|289716861|gb|EFD80873.1| DNA repair protein radC [Fusobacterium sp. D11]
          Length = 232

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/97 (42%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI +R + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSAGTLDRSSVYPREIYKRVISLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L     ++ +HIII K+++ SF    +I
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232


>gi|289449440|ref|YP_003475202.1| DNA repair protein RadC [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289183987|gb|ADC90412.1| DNA repair protein RadC [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 239

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/93 (36%), Positives = 50/93 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL+  N +I  +  + G +D   +  R+I    L  ++ SIIL HNHPSGN  PS AD+
Sbjct: 137 VFLNTANRVIKVQHLATGGLDKCMLTPRDIYHYALACNSASIILAHNHPSGNLEPSKADL 196

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
             TQ      N L + + DH+II    +VS + 
Sbjct: 197 VATQKYCNLGNELCLPLVDHLIIAGHNYVSLRS 229


>gi|34762350|ref|ZP_00143353.1| DNA repair protein radC [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27888004|gb|EAA25068.1| DNA repair protein radC [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 232

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI ++ + L+A S+IL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSIGTLDRSSVYPREIYKKIINLNAKSVILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L     ++ +HIII K+++ SF    +I
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232


>gi|167835745|ref|ZP_02462628.1| DNA repair protein RadC [Burkholderia thailandensis MSMB43]
          Length = 203

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 55/97 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 107 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 166

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  +++ + DH ++G     SF     I
Sbjct: 167 RLTSVLRDALALVDVKLIDHFVVGASDTFSFAQAGWI 203


>gi|254882396|ref|ZP_05255106.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319640551|ref|ZP_07995271.1| DNA repair protein [Bacteroides sp. 3_1_40A]
 gi|254835189|gb|EET15498.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317387828|gb|EFV68687.1| DNA repair protein [Bacteroides sp. 3_1_40A]
          Length = 229

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ + +I     S G +    V +R I++  L   A ++ L HNHPSG+  PS  D 
Sbjct: 133 LLLNQASKVIDRIKISSGGLVSTAVDVRCILREALLKRAVAMALCHNHPSGSMRPSTEDD 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++      +NI + DH+I+    F S+     I
Sbjct: 193 RLTEHLDKAAKVMNIRLIDHVILTDGKFYSYADEGKI 229


>gi|296450811|ref|ZP_06892562.1| DNA repair protein RadC [Clostridium difficile NAP08]
 gi|296260372|gb|EFH07216.1| DNA repair protein RadC [Clostridium difficile NAP08]
          Length = 213

 Score =  105 bits (262), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L   N+ I   + S GT++   V+ RE+++     +A SI+L HNHPSG+  PS  DI
Sbjct: 51  VHLRSDNVPINMTIISMGTLNQSLVHPREVLKAAFLSNAASILLFHNHPSGSLKPSKEDI 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKD-AFVSFKGLRII 97
            +T  +        I V DH+I+G D ++ SF+  +I+
Sbjct: 111 ALTGRMQQLCMLAGIPVIDHVILGNDQSYFSFREKQIL 148


>gi|184154975|ref|YP_001843315.1| hypothetical protein LAF_0499 [Lactobacillus fermentum IFO 3956]
 gi|227514513|ref|ZP_03944562.1| DNA repair protein RadC [Lactobacillus fermentum ATCC 14931]
 gi|260663370|ref|ZP_05864261.1| DNA repair protein RadC [Lactobacillus fermentum 28-3-CHN]
 gi|183226319|dbj|BAG26835.1| hypothetical protein [Lactobacillus fermentum IFO 3956]
 gi|227087070|gb|EEI22382.1| DNA repair protein RadC [Lactobacillus fermentum ATCC 14931]
 gi|260552222|gb|EEX25274.1| DNA repair protein RadC [Lactobacillus fermentum 28-3-CHN]
          Length = 208

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 48/95 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +  D HN +IA +    G       Y  ++ +  ++  A  +IL HNHPSG+P PS AD+
Sbjct: 106 MCTDVHNKIIATKRLFIGGTSECSTYPNQVFRFAIKTGAHGVILAHNHPSGSPAPSTADM 165

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
              + +      + I + D +++G+  + S++  R
Sbjct: 166 IFIKRMEEAGKLIGIALIDALVVGRRDYYSWREAR 200


>gi|299142824|ref|ZP_07035952.1| DNA repair protein RadC [Prevotella oris C735]
 gi|298575692|gb|EFI47570.1| DNA repair protein RadC [Prevotella oris C735]
          Length = 228

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+ H  LI     S G +    + +R I++  L  +AT + L HNHPSG+  PS  D 
Sbjct: 132 LFLNHHYKLIKSIKLSEGGLTETAIDVRVILKEALLCNATVVALAHNHPSGSITPSLPDD 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ +    + + I   DHII+    + S++    +
Sbjct: 192 SITKRVQKACDAVRIYFLDHIIVTDGRYYSYRDSGRL 228


>gi|291522955|emb|CBK81248.1| DNA repair proteins [Coprococcus catus GD/7]
          Length = 860

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 10  IADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITT 69
           I   + S G+++   +  REI +  +  +A S++L+HNHPSGN  PS +DI  T  +   
Sbjct: 58  INMNIVSVGSLNEALINPREIFKSAILSNAHSMMLIHNHPSGNLTPSTSDIQTTARMQEL 117

Query: 70  LNPLNIIVHDHIIIGKDA-FVSFKGLR 95
              + I + DHII G++  + SF+   
Sbjct: 118 GELMGISLVDHIITGRNGNYYSFRDKG 144


>gi|166032960|ref|ZP_02235789.1| hypothetical protein DORFOR_02681 [Dorea formicigenerans ATCC
           27755]
 gi|166027317|gb|EDR46074.1| hypothetical protein DORFOR_02681 [Dorea formicigenerans ATCC
           27755]
          Length = 860

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 10  IADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITT 69
           I   + S G+++   +  REI +  +  +A S++L+HNHPSGN  PS +DI  T  +   
Sbjct: 58  INMNIVSVGSLNEALINPREIFKSAILSNAHSMMLIHNHPSGNLTPSTSDIQTTARMQEL 117

Query: 70  LNPLNIIVHDHIIIGKDA-FVSFKGLR 95
              + I + DHII G++  + SF+   
Sbjct: 118 GELMGISLVDHIITGRNGNYYSFRDKG 144


>gi|153811729|ref|ZP_01964397.1| hypothetical protein RUMOBE_02122 [Ruminococcus obeum ATCC 29174]
 gi|149832132|gb|EDM87217.1| hypothetical protein RUMOBE_02122 [Ruminococcus obeum ATCC 29174]
          Length = 447

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 10  IADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITT 69
           I   + S G+++   +  REI +  +  +A S++L+HNHPSGN  PS +DI  T  +   
Sbjct: 58  INMNIVSVGSLNEALINPREIFKSAILSNAHSMMLIHNHPSGNLTPSTSDIQTTARMQEL 117

Query: 70  LNPLNIIVHDHIIIGKDA-FVSFKGLR 95
              + I + DHII G++  + SF+   
Sbjct: 118 GELMGISLVDHIITGRNGNYYSFRDKG 144


>gi|294775858|ref|ZP_06741357.1| DNA repair protein RadC [Bacteroides vulgatus PC510]
 gi|294450227|gb|EFG18728.1| DNA repair protein RadC [Bacteroides vulgatus PC510]
          Length = 229

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ + +I     S G +    V +R +++  L   A ++ L HNHPSG+  PS  D 
Sbjct: 133 LLLNQASKVIDRIKISSGGLVSTAVDVRCVLREALLKRAVAMALCHNHPSGSMRPSTEDD 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++      +NI + DH+I+    F S+     I
Sbjct: 193 RLTEHLDKAAKVMNIRLIDHVILTDGKFYSYADEGKI 229


>gi|237741852|ref|ZP_04572333.1| DNA repair protein radC [Fusobacterium sp. 4_1_13]
 gi|229429500|gb|EEO39712.1| DNA repair protein radC [Fusobacterium sp. 4_1_13]
          Length = 232

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L   N +I  E  S GT+D   VY REI ++ + L+A SIIL HNHPS N  PS +DI
Sbjct: 136 IYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKIINLNAKSIILAHNHPSDNITPSKSDI 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L     ++ +HIII K+++ SF    +I
Sbjct: 196 ELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232


>gi|260775892|ref|ZP_05884788.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608308|gb|EEX34477.1| DNA repair protein RadC [Vibrio coralliilyticus ATCC BAA-450]
          Length = 224

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 53/96 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD     +       G+++H  V+ RE+++  L L+A ++I  HNHPSG+P+PS AD 
Sbjct: 128 LWLDNGLRALGTVDLFAGSLNHAAVHTREVLRSGLRLNAAAVIFYHNHPSGDPSPSQADR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T ++   L  + I V DH+++     VSF     
Sbjct: 188 QLTNHLKDVLGQIEIRVLDHMVVSLSGVVSFAERGW 223


>gi|299142146|ref|ZP_07035279.1| DNA repair protein RadC [Prevotella oris C735]
 gi|298576235|gb|EFI48108.1| DNA repair protein RadC [Prevotella oris C735]
          Length = 230

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 46/97 (47%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++H  LI     S G I    V +R I++  L  +AT + L HNHPS +  PS  D 
Sbjct: 134 MLLNQHYKLIKALRISHGGISETAVDVRIILKEALLCNATVLALAHNHPSNHAQPSGPDD 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      L I   DH+II    + S+     +
Sbjct: 194 QLTQRVKKACEALRIYFLDHVIITDGTYYSYHDSGRL 230


>gi|281425091|ref|ZP_06256004.1| DNA repair protein RadC [Prevotella oris F0302]
 gi|281400935|gb|EFB31766.1| DNA repair protein RadC [Prevotella oris F0302]
          Length = 234

 Score =  104 bits (261), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 46/97 (47%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++H  LI     S G I    V +R I++  L  +AT + L HNHPS +  PS  D 
Sbjct: 138 MLLNQHYKLIKALRISHGGISETAVDVRIILKEALLCNATVLALAHNHPSNHAQPSGPDD 197

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      L I   DH+II    + S+     +
Sbjct: 198 QLTQRVKKACEALRIYFLDHVIITDGTYYSYHDSGRL 234


>gi|332175969|gb|AEE25222.1| DNA repair protein RadC [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 149

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+ HN ++  E    GT+ H  VY REI ++ L+  A S+IL HNHPSG+   S +D 
Sbjct: 53  IYLNVHNEMLNYEEVFLGTVSHASVYPREIAKKALDCGAESVILAHNHPSGSLQVSASDE 112

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+NI + L  L+I V DHII+      SF  L ++
Sbjct: 113 CVTENIQSALRTLDIGVQDHIIVSHSGTTSFVDLNLL 149


>gi|309390282|gb|ADO78162.1| DNA repair protein RadC [Halanaerobium praevalens DSM 2228]
          Length = 149

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 1/96 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD    +      S GT+    V  RE+ +R +  +A++I++ HNHPS  P PS  DI +
Sbjct: 54  LDSKAQITGVFEVSIGTLSSSLVSPREVFKRAILQNASAILVGHNHPSFVPEPSSDDIKI 113

Query: 63  TQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
           T+ ++     + I V DHII+G KD +VS +    I
Sbjct: 114 TKILVKAGKIIGIKVIDHIIVGSKDNYVSMQERGFI 149


>gi|212213199|ref|YP_002304135.1| DNA repair protein [Coxiella burnetii CbuG_Q212]
 gi|212011609|gb|ACJ18990.1| DNA repair protein [Coxiella burnetii CbuG_Q212]
          Length = 158

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 27/79 (34%), Positives = 46/79 (58%)

Query: 19  TIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVH 78
           + +   V+ REI++R L  ++ ++I+ HNHPSG  +PS AD   T ++   L  +++ + 
Sbjct: 80  SFNQASVHPREIIKRALYHNSAALIVAHNHPSGVLDPSQADRAATTHLKEALALIDVRLL 139

Query: 79  DHIIIGKDAFVSFKGLRII 97
           DHIIIG     SF    ++
Sbjct: 140 DHIIIGDRNSFSFAESGLL 158


>gi|313886466|ref|ZP_07820182.1| DNA repair protein RadC [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924012|gb|EFR34805.1| DNA repair protein RadC [Porphyromonas asaccharolytica PR426713P-I]
          Length = 267

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 11/108 (10%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    +I DE+ S G + H    +R I+   +   A++IIL HNHP+G+  PS  DI
Sbjct: 157 LYLDASGRVIKDELVSSGGVSHAVADLRLILAPAITHYASAIILAHNHPTGHLQPSAEDI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-----------KDAFVSFKGLRII 97
           ++T+ +    +  NI ++DH+I+G           +  F+SF    ++
Sbjct: 217 DLTKRVKQIASVCNIRLNDHLILGRYHASVTSDGERSHFLSFADNGLL 264


>gi|228470139|ref|ZP_04055048.1| DNA repair protein RadC [Porphyromonas uenonis 60-3]
 gi|228308277|gb|EEK17132.1| DNA repair protein RadC [Porphyromonas uenonis 60-3]
          Length = 267

 Score =  104 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 11/108 (10%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    +I DE+ S G + H    +R I+   +   A++IIL HNHP+G+  PS  D+
Sbjct: 157 LYLDASGRVIKDELVSSGGVSHAVADLRLILAPAITHYASAIILAHNHPTGHLQPSAEDM 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-----------KDAFVSFKGLRII 97
           ++T+ +    +  NI ++DH+I+G           +  ++SF    ++
Sbjct: 217 DLTKRVKQVASVCNIRLNDHLILGRYHASVTSDGERSHYLSFADNGLL 264


>gi|94986594|ref|YP_594527.1| DNA repair proteins [Lawsonia intracellularis PHE/MN1-00]
 gi|94730843|emb|CAJ54205.1| DNA repair proteins [Lawsonia intracellularis PHE/MN1-00]
          Length = 226

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 33/94 (35%), Positives = 54/94 (57%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D  N LI+ E  S+GTI   P+Y R+ ++  L+  A+  ILVHNHP G+ N S  DI +T
Sbjct: 133 DTQNRLISWERLSKGTIGSSPLYPRDTIEIVLKRKASGFILVHNHPGGSSNASSFDIEIT 192

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +++      +N+ + DHII+ +    S +   ++
Sbjct: 193 RHLEHIAQSINLRLIDHIIVTEKNCYSIRNDGLL 226


>gi|332177387|gb|AEE13077.1| DNA repair protein RadC [Porphyromonas asaccharolytica DSM 20707]
          Length = 267

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 11/108 (10%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    +I DE+ S G + H    +R I+   +   A++IIL HNHP+G+  PS  DI
Sbjct: 157 LYLDASGRVIKDELVSSGGVSHAVADLRLILAPAITHYASAIILAHNHPTGHLQPSAEDI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-----------KDAFVSFKGLRII 97
           ++T+ +    +  NI ++DH+I+G           +  F+SF    ++
Sbjct: 217 DLTKRVKQIASVCNIRLNDHLILGRYHASVTSDGERSHFLSFADNGLL 264


>gi|325972177|ref|YP_004248368.1| DNA repair protein RadC [Spirochaeta sp. Buddy]
 gi|324027415|gb|ADY14174.1| DNA repair protein RadC [Spirochaeta sp. Buddy]
          Length = 156

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 26/92 (28%), Positives = 49/92 (53%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  + ++     ++G ++   V+ RE+ +  +  +AT+I++ HNHPSGN  PS  D ++
Sbjct: 62  LNGAHQVVDVHAITKGLVNRTLVHPREVFRPVILDNATAIVIAHNHPSGNLEPSMEDKDI 121

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           T  +    + L I V DH+I   + + S    
Sbjct: 122 TMRLRQAGDILGIKVLDHLIFSPNGYHSMLEN 153


>gi|146301324|ref|YP_001195915.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101]
 gi|146155742|gb|ABQ06596.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101]
          Length = 156

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L + + ++     S G I    V IR +    L+ +A ++IL+HNHPSGN  PSDAD 
Sbjct: 60  MLLSQSHKVLGIYEMSSGGIAGTVVDIRLLFTAALKAAAVNVILIHNHPSGNTAPSDADR 119

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T   +     L++ + DH+II  +++ SF     +
Sbjct: 120 QITSKAVKAGQFLDVKILDHLIISSESYYSFADDGAL 156


>gi|288929818|ref|ZP_06423661.1| DNA repair protein RadC [Prevotella sp. oral taxon 317 str. F0108]
 gi|288328919|gb|EFC67507.1| DNA repair protein RadC [Prevotella sp. oral taxon 317 str. F0108]
          Length = 226

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 47/97 (48%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L ++++  LI     S G I    V +R I++  L  + T + L HNHPS N +PS AD 
Sbjct: 129 LLMNQNYKLIKAFRISHGGISETAVDVRVIMREALLNNTTILALCHNHPSNNTSPSTADD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I   DHII+    + S+     +
Sbjct: 189 RLTQTVKKACETMRIHFLDHIIVTDGRYYSYHEEGRL 225


>gi|320537630|ref|ZP_08037565.1| putative DNA repair protein RadC [Treponema phagedenis F0421]
 gi|320145509|gb|EFW37190.1| putative DNA repair protein RadC [Treponema phagedenis F0421]
          Length = 228

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  + +IA  V S G ++   V+ RE+    L   A SII+ HNHPSG+  PS+ DI +
Sbjct: 121 LNGAHEIIAIRVVSVGILNRTIVHPREVFADPLSDRAASIIIAHNHPSGSLQPSEEDIAI 180

Query: 63  TQNIITTLNPLNIIVHDHII-IGKDAFVSFKGLRI 96
           T+ +  + + L I V DHII +    + SF   ++
Sbjct: 181 TERLYESGSLLGIQVLDHIILVPNGDYYSFVENKM 215


>gi|304316582|ref|YP_003851727.1| DNA repair protein RadC [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778084|gb|ADL68643.1| DNA repair protein RadC [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 234

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 58/96 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA +  S G+++   V+ RE+ +  +E SA+SII+VHNHPSG+P PS  DI
Sbjct: 134 VMLNVKNKVIAVDTVSIGSLNTSIVHPREVFKAAIERSASSIIMVHNHPSGDPTPSREDI 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            ++  I  + N L I V DHIIIG    +S K    
Sbjct: 194 EVSDRIFKSGNLLGIKVLDHIIIGDGIGISLKEKGY 229


>gi|257454075|ref|ZP_05619349.1| DNA repair protein RadC [Enhydrobacter aerosaccus SK60]
 gi|257448553|gb|EEV23522.1| DNA repair protein RadC [Enhydrobacter aerosaccus SK60]
          Length = 225

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 53/95 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL     LI  EV   G I    V +RE+++  L+  A+ +I+ HNHPS +   S AD+
Sbjct: 128 LFLTNQLTLIQYEVLFTGGISSCSVCVREVLRCALKYGASQLIIAHNHPSTSATASQADL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+++      +++ + DHII+G+D  +S +   
Sbjct: 188 EITRSLAKACQLVDMTLIDHIIVGQDGTLSLQETG 222


>gi|329767471|ref|ZP_08258995.1| hypothetical protein HMPREF0428_00692 [Gemella haemolysans M341]
 gi|328835919|gb|EGF85635.1| hypothetical protein HMPREF0428_00692 [Gemella haemolysans M341]
          Length = 257

 Score =  103 bits (259), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 50/89 (56%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D    +I      +G++    V+ RE+ +  ++ SA+SI+ VHNHPSG+  PS  DI  T
Sbjct: 133 DTKGKIIEKREVFKGSLSMSVVHPREVFKLAIKNSASSIVCVHNHPSGDATPSIEDIKTT 192

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            N++     + I + DHI++ K  +VS +
Sbjct: 193 INLMEVGEVVGIEMLDHIVVAKKGYVSIR 221


>gi|226952864|ref|ZP_03823328.1| DNA repair protein [Acinetobacter sp. ATCC 27244]
 gi|226836375|gb|EEH68758.1| DNA repair protein [Acinetobacter sp. ATCC 27244]
          Length = 244

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 47/97 (48%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G+     V + + ++  L+  A  I++ HNHP G  +PS  D+
Sbjct: 135 LCLDAELRKLHFKKLFFGSHHSCSVSLNQTLRYVLQQQACQIVVAHNHPYGIAHPSTEDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      L I + DH II  +++ SF   +++
Sbjct: 195 YLTQQLKQACKLLEIHLIDHFIISPESYFSFSEQQLL 231


>gi|294649267|ref|ZP_06726702.1| DNA repair protein RadC [Acinetobacter haemolyticus ATCC 19194]
 gi|292824820|gb|EFF83588.1| DNA repair protein RadC [Acinetobacter haemolyticus ATCC 19194]
          Length = 244

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 47/97 (48%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD     +  +    G+     V + + ++  L+  A  I++ HNHP G  +PS  D+
Sbjct: 135 LCLDAELRKLHFKKLFFGSHHSCSVSLNQTLRYVLQQQACQIVVAHNHPYGIAHPSTEDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      L I + DH II  +++ SF   +++
Sbjct: 195 YLTQQLKQACKLLEIHLIDHFIISPESYFSFSEQQLL 231


>gi|241889686|ref|ZP_04776984.1| DNA repair protein RadC homolog [Gemella haemolysans ATCC 10379]
 gi|241863308|gb|EER67692.1| DNA repair protein RadC homolog [Gemella haemolysans ATCC 10379]
          Length = 257

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 50/89 (56%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D    +I      +G++    V+ RE+ +  ++ SA+SI+ VHNHPSG+  PS  DI  T
Sbjct: 133 DTKGKIIEKREVFKGSLSMSVVHPREVFKLAIKNSASSIVCVHNHPSGDATPSIEDIKTT 192

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            N++     + I + DHI++ K  +VS +
Sbjct: 193 INLMEVGEIVGIEMLDHIVVAKKGYVSIR 221


>gi|254463516|ref|ZP_05076932.1| DNA repair protein RadC [Rhodobacterales bacterium HTCC2083]
 gi|206680105|gb|EDZ44592.1| DNA repair protein RadC [Rhodobacteraceae bacterium HTCC2083]
          Length = 253

 Score =  103 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 51/97 (52%), Positives = 71/97 (73%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N+LIADE    GT+DHVPVY RE+++R LEL++ +IILVHNHPSG+P+PS +DI
Sbjct: 157 LFLNRRNMLIADETLGVGTVDHVPVYPREVLKRALELNSCAIILVHNHPSGDPSPSSSDI 216

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I    + L+I +HDH+IIG     SF    ++
Sbjct: 217 EMTKLIKQAADSLSITLHDHLIIGATGETSFVSEGLL 253


>gi|312794225|ref|YP_004027148.1| DNA repair protein radc [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181365|gb|ADQ41535.1| DNA repair protein RadC [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 159

 Score =  103 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 48/94 (51%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D     +A    +RGT+    + +RE+ +R +  +  S I+ HNHP G+  PS  D+  T
Sbjct: 64  DPQLNPVAVFEVARGTLTEAQISMRELFKRLIISNCNSFIVAHNHPGGSERPSLDDVRTT 123

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             I  T   L I  +DHII+ ++ + SF    ++
Sbjct: 124 DRIRETAKLLGITFNDHIIVTEEGYYSFAENNML 157


>gi|300173737|ref|YP_003772903.1| DNA repair protein [Leuconostoc gasicomitatum LMG 18811]
 gi|299888116|emb|CBL92084.1| DNA repair protein [Leuconostoc gasicomitatum LMG 18811]
          Length = 203

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/93 (34%), Positives = 48/93 (51%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD    +I  E    G++ HV    REI QR L  +A   ++VHNHPSGN  PSDAD+ 
Sbjct: 104 LLDAQLSVIGWETIFVGSLTHVQASPREIFQRALHANALGFMIVHNHPSGNLKPSDADVQ 163

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +Q +      + + + D  I+ +D++ S    
Sbjct: 164 FSQRLKLLGEQMTVPMLDSFIVTRDSYWSMSEN 196


>gi|153006772|ref|YP_001381097.1| DNA repair protein RadC [Anaeromyxobacter sp. Fw109-5]
 gi|152030345|gb|ABS28113.1| DNA repair protein RadC [Anaeromyxobacter sp. Fw109-5]
          Length = 222

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 1/96 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS-GNPNPSDAD 59
           + LD    LI     + G++   PV  R+ ++  +   A  ++ VHNHPS G+P+PS  D
Sbjct: 123 VLLDVRGRLIKTVKIAEGSLTQCPVSPRDALREPVRSGAHGVVFVHNHPSGGDPSPSADD 182

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            ++T+ +      + ++  DH+I+    + SF    
Sbjct: 183 ADLTERLRAAAELVGVLARDHVIVAAGGYYSFVEAG 218


>gi|116617575|ref|YP_817946.1| DNA repair protein [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
 gi|116096422|gb|ABJ61573.1| DNA repair protein [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 202

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 52/96 (54%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD    +I  EV   GT+  V    REI QR L+ +A   ++ HNHPSGN  PS+ADI 
Sbjct: 103 LLDTQLNVIGWEVVFVGTLSQVQASPREIFQRVLKANAFGFMIAHNHPSGNIMPSNADIT 162

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +Q + T  + +++ + D  I+ ++ + S    + +
Sbjct: 163 FSQRLATIGHQMDLRLFDSFIVTQNEYWSMSENQQL 198


>gi|307154341|ref|YP_003889725.1| DNA repair protein RadC [Cyanothece sp. PCC 7822]
 gi|306984569|gb|ADN16450.1| DNA repair protein RadC [Cyanothece sp. PCC 7822]
          Length = 243

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/93 (34%), Positives = 53/93 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  +  +A +V + GT     V+ REI +  ++  AT +I+ HNHPSGN  PS  DI
Sbjct: 139 VLLNVKSQFLATKVITIGTATETLVHPREIFREVIKQGATKLIIGHNHPSGNVEPSQEDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           ++T+ ++     LNI + DH+I+G     S + 
Sbjct: 199 DLTEQLLQGATFLNIPILDHLILGNGNHQSLRQ 231


>gi|187478895|ref|YP_786919.1| DNA repair protein RadC [Bordetella avium 197N]
 gi|123514372|sp|Q2KXW4|Y2405_BORA1 RecName: Full=UPF0758 protein BAV2405
 gi|115423481|emb|CAJ50015.1| DNA repair protein [Bordetella avium 197N]
          Length = 225

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 36/84 (42%), Positives = 49/84 (58%)

Query: 14  VQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPL 73
              RGT+    V+ RE+V+  L L A +IIL HNHPSGNP PS AD   TQ +   L  +
Sbjct: 142 ELERGTLGRASVFPREVVREALRLHAGAIILAHNHPSGNPQPSAADCAFTQQLSQALALV 201

Query: 74  NIIVHDHIIIGKDAFVSFKGLRII 97
           +I + DHII+ +D  +S     +I
Sbjct: 202 DIRLVDHIIVARDQALSMAERGLI 225


>gi|257792997|ref|YP_003186396.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479689|gb|ACV60007.1| DNA repair protein RadC [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 147

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L   +I+ A    S G +D   V+ RE+ +  +  +A S+I+ HNHPSG+P PS  D+ +
Sbjct: 52  LSAKHIVNAINTVSLGILDSSIVHPREVFKPAILSNAASVIVGHNHPSGDPEPSPEDVAV 111

Query: 63  TQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97
           T+ ++     L I V DHI+IG    FVS K   ++
Sbjct: 112 TRRLVDAGKILGIDVLDHIVIGDEGRFVSLKARELL 147


>gi|312977321|ref|ZP_07789069.1| DNA repair protein, RadC family protein [Lactobacillus crispatus
           CTV-05]
 gi|310895752|gb|EFQ44818.1| DNA repair protein, RadC family protein [Lactobacillus crispatus
           CTV-05]
          Length = 201

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 51/95 (53%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L     +I+D++   GT+++  + +  IV+      A + I+VHNHPSG+  PS AD+ M
Sbjct: 105 LSNQGQIISDDLVGSGTVENSAISVPLIVKTLCLNGAANFIVVHNHPSGSMKPSKADLKM 164

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T +I      + + + DH I+G   + SF    ++
Sbjct: 165 TDSIKNLSELIKVRMLDHFIVGNGNYFSFAEHGLL 199


>gi|282859078|ref|ZP_06268210.1| DNA repair protein RadC [Prevotella bivia JCVIHMP010]
 gi|282588158|gb|EFB93331.1| DNA repair protein RadC [Prevotella bivia JCVIHMP010]
          Length = 225

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L ++++  LI  +  S G I    V +R I++  L  +AT I   HNHPS N  PS  D 
Sbjct: 129 LLMNQNYKLIEAKRISCGGITETAVDVRLILKEALLKNATVIAFCHNHPSNNIKPSSQDD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +      L I + DH+II   A+ S+     +
Sbjct: 189 RLTEQLKKGAELLRIHLVDHVIITDGAYYSYCEDGRL 225


>gi|255029557|ref|ZP_05301508.1| DNA repair protein RadC [Listeria monocytogenes LO28]
          Length = 80

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query: 18 GTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIV 77
          G ++   V+ RE+ +  L  SA SI+  HNHPSG+P PS  D+ +T+ +    N + I +
Sbjct: 1  GGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDPTPSSEDLLVTKRLAEAGNIVGITL 60

Query: 78 HDHIIIGKDAFVSFKGLRI 96
           DHIIIGK+ ++S K    
Sbjct: 61 LDHIIIGKNKYISLKEKGY 79


>gi|238924108|ref|YP_002937624.1| DNA repair protein RadC [Eubacterium rectale ATCC 33656]
 gi|238875783|gb|ACR75490.1| DNA repair protein RadC [Eubacterium rectale ATCC 33656]
          Length = 229

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 56/96 (58%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           + D  +  + D+  S+G++    V I  I++  L+ +A+ ++L+HNHPSG+  PS  DI 
Sbjct: 134 YFDVKSRFLGDKFISKGSLSSSVVDIGSIIRTALDKNASKLVLLHNHPSGDCTPSRNDIA 193

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T  +I      +I + DHIIIG + + SF   ++I
Sbjct: 194 VTDRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229


>gi|291524848|emb|CBK90435.1| DNA replication and repair protein RadC [Eubacterium rectale DSM
           17629]
          Length = 229

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 56/96 (58%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           + D  +  + D+  S+G++    V +  I++  L+ +A+ ++L+HNHPSG+  PS  DI 
Sbjct: 134 YFDVKSRFLGDKFISKGSLSSSVVDVGSIIRTALDKNASKLVLLHNHPSGDCTPSRNDIA 193

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T  +I      +I + DHIIIG + + SF   ++I
Sbjct: 194 VTDRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229


>gi|295090558|emb|CBK76665.1| DNA repair proteins [Clostridium cf. saccharolyticum K10]
          Length = 172

 Score =  103 bits (257), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD     +A E+ + G +    V ++ I +  +  +A+ +I  HNHPSG   PS+ D+  
Sbjct: 70  LDSKLEPMAMEIAAVGGVSSCLVDMKSIFRHAILNNASYVICFHNHPSGECEPSNEDLKT 129

Query: 63  TQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
            Q +      L + + DHIIIG +  F+S   +  +
Sbjct: 130 AQRMEEAGKLLGLPLVDHIIIGAEGRFLSLAEMGAL 165


>gi|291528989|emb|CBK94575.1| DNA replication and repair protein RadC [Eubacterium rectale
           M104/1]
          Length = 229

 Score =  103 bits (257), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 56/96 (58%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           + D  +  + D+  S+G++    V I  I++  L+ +A+ ++L+HNHPSG+  PS  DI 
Sbjct: 134 YFDVKSRFLGDKFISKGSLSSSVVDIGSIIRTALDKNASKLVLLHNHPSGDCTPSRNDIA 193

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T  +I      +I + DHIIIG + + SF   ++I
Sbjct: 194 VTDRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229


>gi|148652303|ref|YP_001279396.1| DNA repair protein RadC [Psychrobacter sp. PRwf-1]
 gi|172048495|sp|A5WCQ5|Y491_PSYWF RecName: Full=UPF0758 protein PsycPRwf_0491
 gi|148571387|gb|ABQ93446.1| DNA repair protein RadC [Psychrobacter sp. PRwf-1]
          Length = 226

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 54/93 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    L+  +V   G +    V ++++++  LE  A+ II+ HNHP+ +  PS ADI
Sbjct: 128 LCLDNGLNLLDYKVLFVGGLSSCSVCVKQVLRHALEQGASQIIIAHNHPNQDATPSAADI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           ++TQ +      +++ + DHII+G++  +SF  
Sbjct: 188 HLTQTLKLACEAIDLRLTDHIIVGRNQTLSFAE 220


>gi|269121533|ref|YP_003309710.1| DNA repair protein RadC [Sebaldella termitidis ATCC 33386]
 gi|268615411|gb|ACZ09779.1| DNA repair protein RadC [Sebaldella termitidis ATCC 33386]
          Length = 227

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/97 (43%), Positives = 58/97 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+  N LI DE    GT+D   V+ RE +++ LE  A S+ILVHNHPSG   PS++DI
Sbjct: 131 LFLNTQNELIKDENLFYGTLDKSAVHPREFIKKVLENDAKSVILVHNHPSGALKPSESDI 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +   L  L I + DHII+  + + SF    I+
Sbjct: 191 LITSKLKHLLEKLEIKLLDHIIVSPNGYFSFLEGGIL 227


>gi|260880942|ref|ZP_05403206.2| DNA repair protein RadC [Mitsuokella multacida DSM 20544]
 gi|260849987|gb|EEX69994.1| DNA repair protein RadC [Mitsuokella multacida DSM 20544]
          Length = 158

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D  +  +   V ++GT++   V+ RE+ Q CL  +A +  + HNHPSG+  PS  D  +T
Sbjct: 59  DSKSKPLCVTVVTKGTLNCSLVHPREVFQPCLLANAAACFVFHNHPSGDVTPSREDKAIT 118

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           + ++   + L++ V DHII+G + F SF+   
Sbjct: 119 ERLVKAGHILDVPVLDHIIVGDN-FYSFRTDG 149


>gi|169403143|emb|CAP17743.1| hypothetical protein [Staphylococcus pseudintermedius]
          Length = 294

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/90 (36%), Positives = 50/90 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N     E  S GTI+   ++ REI +  +  +AT +I+ HNHPSG+  PS  DI
Sbjct: 51  ICLNSKNEPTHIETVSIGTINFAVIHPREIFKTAILSNATGMIIGHNHPSGDITPSPGDI 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
            +TQ I      + II++DHII  ++   S
Sbjct: 111 KITQRIKEISEMMGIILYDHIIFSENDHHS 140


>gi|67923800|ref|ZP_00517262.1| DNA repair protein RadC [Crocosphaera watsonii WH 8501]
 gi|67854343|gb|EAM49640.1| DNA repair protein RadC [Crocosphaera watsonii WH 8501]
          Length = 242

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 52/91 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD    L+  +V + GT     V   EI +  L+  A ++I+ HNHPSGN  PS  D+
Sbjct: 139 VFLDSKYRLLGTKVINIGTATESLVDATEIFRETLKQGANALIVAHNHPSGNVEPSQEDL 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           ++T+ ++  +  L+I + DH+I+G+    S 
Sbjct: 199 DLTEQLLKGMQLLHIPLIDHLILGEGNHCSL 229


>gi|167933132|ref|ZP_02520219.1| DNA repair protein RadC [candidate division TM7 single-cell
          isolate TM7b]
          Length = 92

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/88 (42%), Positives = 49/88 (55%)

Query: 3  LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
          LD  N LIA  V + GT+    V+ RE+    +   A SII+ HNHPSG+   S AD ++
Sbjct: 3  LDGANRLIAKRVVTIGTLTASLVHPREVFADAIADRAASIIVAHNHPSGSLEASQADKDV 62

Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVS 90
          T  +      L I ++DHIII K  FVS
Sbjct: 63 TSRLAEAGRLLGITLNDHIIITKTDFVS 90


>gi|323342146|ref|ZP_08082379.1| DNA repair protein RadC [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464571|gb|EFY09764.1| DNA repair protein RadC [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 235

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 53/94 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL   N LI      +GT D   V+ R++ +  +  +A+ I+LVHNHP G+ + S+AD+
Sbjct: 135 LFLSTQNNLIRYLDLFKGTADKSLVHPRDVFREAVRCNASRIVLVHNHPGGSLSASEADV 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ +I     + I V DHII+     VS + L
Sbjct: 195 EVTRALIEVGMMIGIEVVDHIIVTSTNSVSLRNL 228


>gi|257456116|ref|ZP_05621317.1| DNA repair protein RadC [Treponema vincentii ATCC 35580]
 gi|257446502|gb|EEV21544.1| DNA repair protein RadC [Treponema vincentii ATCC 35580]
          Length = 222

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  + + A  V S GT+ H  V+ RE+    L   A ++I+ HNHPSG+  PS  D+ +
Sbjct: 125 LNGAHEISAIRVVSVGTLTHTLVHPREVFADPLADRAAAVIIAHNHPSGSLEPSVEDLTL 184

Query: 63  TQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRI 96
           T+ +    N L I V DHII+     ++SF     
Sbjct: 185 TRRLYQAGNLLGIEVLDHIILSPNGEYLSFIESGF 219


>gi|145589913|ref|YP_001156510.1| DNA repair protein RadC [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048319|gb|ABP34946.1| DNA replication and repair protein RadC [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 239

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/83 (42%), Positives = 53/83 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LI  +   RG+I    VY REI++  L  +A+++I+ HNHPSGNP PS AD 
Sbjct: 139 LYLDPRLHLIECQELFRGSITQTAVYPREILKEALSRNASALIVAHNHPSGNPLPSQADQ 198

Query: 61  NMTQNIITTLNPLNIIVHDHIII 83
           ++TQ ++  L  ++I + DH I+
Sbjct: 199 DLTQTLLKALQWVDISLLDHCIV 221


>gi|163753959|ref|ZP_02161082.1| putative DNA repair protein [Kordia algicida OT-1]
 gi|161326173|gb|EDP97499.1| putative DNA repair protein [Kordia algicida OT-1]
          Length = 144

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 59/97 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++ N+++     S+G +    V ++ I+   L+  A+SI+L+HNHPSG   PS+ D 
Sbjct: 48  MLLNRANVILGIYDLSKGGVASCSVDLKIILSIALKGHASSIVLLHNHPSGKLEPSNNDK 107

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ +    + L++++ DH+II K++F SF    I+
Sbjct: 108 IITKKLKKACSYLDLVLLDHLIITKNSFYSFNDNNIL 144


>gi|302327620|gb|ADL26821.1| DNA repair protein RadC [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 228

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/89 (39%), Positives = 50/89 (56%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +I     + G ++  PV+ RE     +E  A S+I VHNHPSG+  PS  D+++
Sbjct: 126 LNSANYIIRVHELTTGLVNQTPVHPREAFALAIEDRAVSVIFVHNHPSGSLEPSPEDMSI 185

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           T+ +  +   L I V DHIIIGK  F S 
Sbjct: 186 TRVLCASGKILQIPVLDHIIIGKSGFTSL 214


>gi|261416893|ref|YP_003250576.1| DNA repair protein RadC [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373349|gb|ACX76094.1| DNA repair protein RadC [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 233

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/89 (39%), Positives = 50/89 (56%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +I     + G ++  PV+ RE     +E  A S+I VHNHPSG+  PS  D+++
Sbjct: 131 LNSANYIIRVHELTTGLVNQTPVHPREAFALAIEDRAVSVIFVHNHPSGSLEPSPEDMSI 190

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
           T+ +  +   L I V DHIIIGK  F S 
Sbjct: 191 TRVLCASGKILQIPVLDHIIIGKSGFTSL 219


>gi|259502841|ref|ZP_05745743.1| DNA repair protein RadC [Lactobacillus antri DSM 16041]
 gi|259169208|gb|EEW53703.1| DNA repair protein RadC [Lactobacillus antri DSM 16041]
          Length = 212

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 47/92 (51%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
             D HN +I  +   +G      +Y  +I    L  SAT I +VHNHPSG+  PSD D+ 
Sbjct: 113 CTDVHNDVIDYKTVFKGGHSECLLYPDQIFAYALRQSATGIAMVHNHPSGDVKPSDQDLR 172

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
             + +      L I + D +I+G++ + S++ 
Sbjct: 173 FAKRLERGSRILGIQLLDFLIVGQERYFSWRE 204


>gi|88801917|ref|ZP_01117445.1| putative DNA repair protein [Polaribacter irgensii 23-P]
 gi|88782575|gb|EAR13752.1| putative DNA repair protein [Polaribacter irgensii 23-P]
          Length = 149

 Score =  102 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 51/94 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+  N ++     S+G+     V ++ +    L+ +AT II+ HNHPS N  PS +D+
Sbjct: 53  LLLNNANEVLGIHALSKGSTRGTVVDLKLLFVIALKSNATGIIIAHNHPSSNLKPSRSDL 112

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ I  +   L+I + DH+II KD F S    
Sbjct: 113 ELTKRIKKSGELLDIKLLDHLIITKDEFYSLSDN 146


>gi|329769004|ref|ZP_08260427.1| hypothetical protein HMPREF0433_00191 [Gemella sanguinis M325]
 gi|328835811|gb|EGF85534.1| hypothetical protein HMPREF0433_00191 [Gemella sanguinis M325]
          Length = 258

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 51/89 (57%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           +    +I      +G++    V+ RE+ +  ++ SA SI+ +HNHPSG+  PS  DI  T
Sbjct: 134 NTKGKIIQQREVFKGSLSTSIVHSREVFKMAIKNSAASIVCIHNHPSGDATPSVEDIRTT 193

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            N++   + + I + DHIII K+ +VS +
Sbjct: 194 INLMEVGDIIGIEMLDHIIIAKEGYVSIR 222


>gi|327441404|dbj|BAK17769.1| DNA repair protein [Solibacillus silvestris StLB046]
          Length = 154

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/93 (29%), Positives = 50/93 (53%)

Query: 5   KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQ 64
             N     +V   G+I+   V+ R++++  +  +  S ++ HNHPS +  PS  DI++T+
Sbjct: 62  TKNEPQVIQVVHTGSINASIVHPRDVMKALILANCASCVVGHNHPSNDVTPSPEDIDVTE 121

Query: 65  NIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            ++     L I V DH+I+  + F+SFK    +
Sbjct: 122 RLVEAGKILGIDVLDHVILSSNTFLSFKEKGYM 154


>gi|325953769|ref|YP_004237429.1| DNA repair protein RadC [Weeksella virosa DSM 16922]
 gi|323436387|gb|ADX66851.1| DNA repair protein RadC [Weeksella virosa DSM 16922]
          Length = 153

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL++ N ++   V + G      V    ++   L   A S+I+ HNHPSGN  PS AD 
Sbjct: 57  IFLNQANHVLGFRVLNTGMRSTSLVDKPLLISLALGCRAASVIIAHNHPSGNLQPSIADR 116

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ+I       +I + DH II  D   SF    I+
Sbjct: 117 ELTQDIKRKCEFFDIKLLDHFIITSDGHYSFAINNIL 153


>gi|189485402|ref|YP_001956343.1| DNA repair protein RadC [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287361|dbj|BAG13882.1| DNA repair protein RadC [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 229

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +        GT++   +  R+I +  L+  A S+++ HNHP G   PS  DI
Sbjct: 133 ILLNSGNRVTDCLEIESGTVNKSLLIPRKIAEIALKCRAASVVIAHNHPGGTLKPSQNDI 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N T  +   L  + I + DHIII  + + SFK   +I
Sbjct: 193 NATVAVKKALESIEISLLDHIIISNNNYFSFKEYSLI 229


>gi|323704266|ref|ZP_08115845.1| DNA repair protein RadC [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323536332|gb|EGB26104.1| DNA repair protein RadC [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 234

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 57/96 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +IA +  S G+++   V+ RE+ +  +E SA+SII+VHNHPSG+P PS  D+
Sbjct: 134 VLLNVKNKVIAVDTVSIGSLNTSIVHPREVFKAAIERSASSIIMVHNHPSGDPTPSREDV 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            ++  I    N + I V DHIIIG    +S K    
Sbjct: 194 EVSDRIYKGGNLIGIKVLDHIIIGDGIGISLKEKGY 229


>gi|93006943|ref|YP_581380.1| DNA repair protein RadC [Psychrobacter cryohalolentis K5]
 gi|123386568|sp|Q1Q8V7|Y2119_PSYCK RecName: Full=UPF0758 protein Pcryo_2119
 gi|92394621|gb|ABE75896.1| DNA repair protein RadC [Psychrobacter cryohalolentis K5]
          Length = 227

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 51/96 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    LI  E+   G I    V I+ +++  L  +A+ +I+ HNHP  +  PS AD 
Sbjct: 128 LCLDNALNLINFEILFTGGISSCSVCIKHVLRHALSHAASQLIIAHNHPHTDAKPSTADN 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T  +    + +++ + DH+I+G++  +S+    +
Sbjct: 188 LLTYELKKACDLIDLSLIDHVIVGRNETLSYAENSL 223


>gi|220904890|ref|YP_002480202.1| DNA repair protein RadC [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869189|gb|ACL49524.1| DNA repair protein RadC [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 229

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/94 (35%), Positives = 49/94 (52%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D+ N L A E   +G +  VPV  R++ +  L   A+ II+VHNHP GNP PS+AD   T
Sbjct: 136 DQRNRLTAWERLRQGGVAEVPVQPRDVFEAALLRKASGIIVVHNHPGGNPAPSEADKTFT 195

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             +      L +   DH+I+ +    S   ++ I
Sbjct: 196 AELQRLAPQLGLRFLDHVIVTEGDCYSITQMQTI 229


>gi|158522103|ref|YP_001529973.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3]
 gi|158510929|gb|ABW67896.1| DNA repair protein RadC [Desulfococcus oleovorans Hxd3]
          Length = 223

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/91 (30%), Positives = 45/91 (49%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           +  N +++  V S G I+   V+ RE+    L   A+++I+ HNHP G+  PS  DI +T
Sbjct: 130 NGANEVMSVRVVSIGLINKTQVHPREVFADVLAERASAVIVAHNHPHGDLAPSREDIQVT 189

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           + +      L +   DHII     + SF   
Sbjct: 190 RQLKDAAQTLGLTFLDHIIFNTTGYYSFAEQ 220


>gi|94264365|ref|ZP_01288156.1| DNA repair protein RadC [delta proteobacterium MLMS-1]
 gi|93455194|gb|EAT05410.1| DNA repair protein RadC [delta proteobacterium MLMS-1]
          Length = 243

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD    ++A E  + GT+    V+ RE+V   L   A ++IL HNHPSGN  PS  D 
Sbjct: 134 IYLDASYGILALEELAVGTLTAATVHPREVVAAALRHKAAAVILAHNHPSGNLQPSTQDR 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97
            +T+ +   L    I + DH +IG  +   SF    ++
Sbjct: 194 QLTRRLFLALAFCEIQLLDHCVIGGEERPYSFADHGLM 231


>gi|94268846|ref|ZP_01291300.1| DNA repair protein RadC [delta proteobacterium MLMS-1]
 gi|94270555|ref|ZP_01291766.1| DNA repair protein RadC [delta proteobacterium MLMS-1]
 gi|93450762|gb|EAT01820.1| DNA repair protein RadC [delta proteobacterium MLMS-1]
 gi|93451446|gb|EAT02288.1| DNA repair protein RadC [delta proteobacterium MLMS-1]
          Length = 243

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD    ++A E  + GT+    V+ RE+V   L   A ++IL HNHPSGN  PS  D 
Sbjct: 134 IYLDASYGILALEELAVGTLTAATVHPREVVAAALRHKAAAVILAHNHPSGNLQPSTQDR 193

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97
            +T+ +   L    I + DH +IG  +   SF    ++
Sbjct: 194 QLTRRLFLALAFCEIQLLDHCVIGGEERPYSFADHGLM 231


>gi|260911031|ref|ZP_05917667.1| DNA repair protein RadC [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634835|gb|EEX52889.1| DNA repair protein RadC [Prevotella sp. oral taxon 472 str. F0295]
          Length = 230

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L ++++  LI     S G I    V +R I++  L  + T + L HNHPS N +PS AD 
Sbjct: 129 LLMNQNYKLIKAFRVSHGGISETAVDVRVIMREALLNNTTILALCHNHPSNNASPSAADD 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +      + I   DHII+   ++ S+     +
Sbjct: 189 RLTQIVKNACETMRIHFLDHIIVTDGSYYSYHEAGRL 225


>gi|330837363|ref|YP_004412004.1| DNA repair protein RadC [Spirochaeta coccoides DSM 17374]
 gi|329749266|gb|AEC02622.1| DNA repair protein RadC [Spirochaeta coccoides DSM 17374]
          Length = 228

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 52/93 (55%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  + +I+ +V S G ++   V+ RE+    ++  A ++I+ HNHPSGN  PS  D+++
Sbjct: 134 LNGAHEVISVDVVSIGLVNRTLVHPREVFALPMKNRAVAVIVAHNHPSGNLTPSPEDLDV 193

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           T  +    + + I V DH+I  +++F S     
Sbjct: 194 THRLKIAGDVVGINVLDHLIFSEESFYSLLEGG 226


>gi|146301504|ref|YP_001196095.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101]
 gi|146155922|gb|ABQ06776.1| DNA repair protein RadC [Flavobacterium johnsoniae UW101]
          Length = 155

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L++ N ++     S G I    V +R +    L+  A  +I+ HNHPSGN  PS+ D 
Sbjct: 59  LLLNQSNKVLGIYEVSSGGITSTVVDVRLLFAAALKAGAAGLIIAHNHPSGNVLPSEPDK 118

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ I      L+I + DH+I+  + + SF     +
Sbjct: 119 HITKKISMAGEVLDIKLLDHLIVTSEHYYSFADQGAL 155


>gi|325267779|ref|ZP_08134429.1| DNA repair protein RadC [Kingella denitrificans ATCC 33394]
 gi|324980660|gb|EGC16322.1| DNA repair protein RadC [Kingella denitrificans ATCC 33394]
          Length = 237

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 54/97 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    LIA E  SRGT+    +Y+RE+ +R L   A S++L HNHPSG+  PS  D 
Sbjct: 140 LFLDAQQRLIACEELSRGTVAENALYVREVAKRALHHHAVSVLLAHNHPSGDVQPSAEDC 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +   L  L+I + DHII+      SF    ++
Sbjct: 200 AATERLQAALQLLDIQLLDHIIVAAQDTFSFAQHGLL 236


>gi|88608186|ref|YP_506123.1| DNA repair protein RadC [Neorickettsia sennetsu str. Miyayama]
 gi|88600355|gb|ABD45823.1| DNA repair protein RadC [Neorickettsia sennetsu str. Miyayama]
          Length = 236

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 57/97 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K   LI + VQ  G  DH P+ +REI+++CL   A+++++ HNHPSGNP PS  D+
Sbjct: 140 LFLNKKYTLIREYVQELGAADHTPLCMREIIKKCLTCGASAMVIAHNHPSGNPLPSQEDL 199

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  +      +++ + DH I+      SF    ++
Sbjct: 200 LITGKLKKICQKVDVQLVDHFIVTPHDHFSFVVNGLL 236


>gi|42521845|ref|NP_967225.1| putative DNA repair protein [Bdellovibrio bacteriovorus HD100]
 gi|39574376|emb|CAE77880.1| putative DNA repair protein [Bdellovibrio bacteriovorus HD100]
          Length = 170

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 52/94 (55%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD    L+  E+  RGT+D   ++ R+I +  ++ +A+S IL HNHPS N  PS+ D+ +
Sbjct: 62  LDSQMNLVLKEMLFRGTVDFCMIHPRDIFRCLVQANASSFILAHNHPSQNVLPSEQDLIL 121

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           T+ I        I ++DH+++ ++ + S      
Sbjct: 122 TRRIHQLAQMFEIPLNDHLVVCENNYFSMADHGY 155


>gi|225378256|ref|ZP_03755477.1| hypothetical protein ROSEINA2194_03917 [Roseburia inulinivorans DSM
           16841]
 gi|260438678|ref|ZP_05792494.1| DNA repair protein RadC [Butyrivibrio crossotus DSM 2876]
 gi|225209919|gb|EEG92273.1| hypothetical protein ROSEINA2194_03917 [Roseburia inulinivorans DSM
           16841]
 gi|292808879|gb|EFF68084.1| DNA repair protein RadC [Butyrivibrio crossotus DSM 2876]
          Length = 179

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L      I     S G+++    + RE+ +  +  +A S++L+H HPSGN  PS AD  M
Sbjct: 55  LSSDLKPINVHFASVGSLNEAMAHPRELFKSSILSNAASMMLIHCHPSGNIFPSKADTMM 114

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDA--FVSFKGLRII 97
           T  +      + I + DHII+G D   F SFK   +I
Sbjct: 115 TDRMNKLCELIGIPLLDHIIVGGDNRAFFSFKEKGMI 151


>gi|99035915|ref|ZP_01314963.1| hypothetical protein Wendoof_01000193 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 218

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   L+ +E    G ++  PVYI+EI+++ L  +AT II+ HNHP G+  PS+ D 
Sbjct: 123 LYLNKRRQLVGEES-YIGEMEKAPVYIKEIIRKALIKNATLIIMSHNHPGGSLEPSEEDQ 181

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++    + +++ + DHIII    + SFK   ++
Sbjct: 182 AVTKSLAAACSTVSVKLFDHIIITSGGYFSFKESGLL 218


>gi|28189060|dbj|BAC56212.1| putative DNA repair protein [Streptococcus suis]
          Length = 215

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 51/83 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I+ +    G+++      REI+   ++  ATSII+VHNHPSG+  PS  D+
Sbjct: 129 LYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRNDL 188

Query: 61  NMTQNIITTLNPLNIIVHDHIII 83
             T+N+  +   L +++ DH+I+
Sbjct: 189 LFTENLKESCEKLGLVLLDHLIV 211


>gi|320352527|ref|YP_004193866.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032]
 gi|320121029|gb|ADW16575.1| DNA repair protein RadC [Desulfobulbus propionicus DSM 2032]
          Length = 245

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  + +I   V + GT+    VY RE+V+  L  +A+++++ HNHPSG+  PS  D 
Sbjct: 133 VFLDAAHGIIDAAVVAEGTVTVNTVYPRELVKAALARNASALVIAHNHPSGSLTPSRQDE 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
            +T+++    + ++I + DH+IIG  D   SF    I+
Sbjct: 193 ELTRSLHLICSFMHINLLDHLIIGASDQVYSFADQGIM 230


>gi|288561648|ref|YP_003429054.1| DNA repair protein radC-like protein [Bacillus pseudofirmus OF4]
 gi|288548280|gb|ADC52162.1| DNA repair protein radC-like protein [Bacillus pseudofirmus OF4]
          Length = 206

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 49/94 (52%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FL+  N +I  +  S G +D   V  R I++  L +SA  I+ VHNHPSG    S  D+ 
Sbjct: 110 FLNVKNHVILKKTISIGGLDSTLVDTRIILREALRVSAAKIVAVHNHPSGIALFSTNDLV 169

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           +T+ + +  + ++I   DH+IIG   F S     
Sbjct: 170 VTKKLKSACDAVDIEFFDHVIIGDGTFSSLINEG 203


>gi|300726257|ref|ZP_07059710.1| DNA repair protein RadC [Prevotella bryantii B14]
 gi|299776454|gb|EFI73011.1| DNA repair protein RadC [Prevotella bryantii B14]
          Length = 230

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + ++++  LI     S G I    V IR I++  +  +AT + L+HNHPS NPNPS  D 
Sbjct: 133 ILMNQNYKLIKAIRISHGGISETAVDIRIIMKEAILSNATVLALIHNHPSNNPNPSRQDD 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ ++   + + I   DH+I+    + S++    I
Sbjct: 193 RLTERVMKACDIMRIYFLDHVIVTDGVYYSYREAHHI 229


>gi|218134697|ref|ZP_03463501.1| hypothetical protein BACPEC_02600 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990082|gb|EEC56093.1| hypothetical protein BACPEC_02600 [Bacteroides pectinophilus ATCC
           43243]
          Length = 179

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L      I     S G+++    + RE+ +  +  +A S++L+H HPSGN  PS AD  M
Sbjct: 55  LSSDLKPINVHFASVGSLNEAMAHPRELFKASILSNAASMMLIHCHPSGNIFPSKADTMM 114

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDA--FVSFKGLRII 97
           T  +      + I + DHII+G D   F SFK   +I
Sbjct: 115 TDRMNKLCELIGIPLLDHIIVGGDNRAFFSFKEKGMI 151


>gi|317495680|ref|ZP_07954045.1| DNA repair protein RadC [Gemella moribillum M424]
 gi|316914133|gb|EFV35614.1| DNA repair protein RadC [Gemella moribillum M424]
          Length = 258

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 52/89 (58%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D    ++      +G++    V+ RE+ +  ++ SA SI+ VHNHPSG+P PS  D+  T
Sbjct: 134 DTKGKILEKREVFKGSLAMSVVHPREVFKNAIKNSAASIVCVHNHPSGDPTPSIEDLLTT 193

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
            N+I   + + I + DHI++ K+ +VS +
Sbjct: 194 INLIEVGDVVGIEMLDHIVVAKEGYVSIR 222


>gi|319425169|gb|ADV53243.1| DNA repair protein RadC [Shewanella putrefaciens 200]
          Length = 147

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/91 (36%), Positives = 55/91 (60%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L   + +   EV + G+++ + +   E+++  + L+  S+ILVHNHPSG+P PS +DI  
Sbjct: 51  LTNQHTINCVEVVATGSVNGISMRPVEVLRTAVILNMPSVILVHNHPSGDPTPSTSDIQF 110

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           T+ +I     L+I V DH+IIG + F S + 
Sbjct: 111 TRKVIECAKVLDINVLDHVIIGLNRFTSLRE 141


>gi|229093550|ref|ZP_04224652.1| DNA repair protein radC [Bacillus cereus Rock3-42]
 gi|228689880|gb|EEL43685.1| DNA repair protein radC [Bacillus cereus Rock3-42]
          Length = 208

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 44/78 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVH 78
            +T+ ++     + I + 
Sbjct: 189 EVTKRLVECGRIIGIEML 206


>gi|227432969|ref|ZP_03914908.1| possible DNA repair protein [Leuconostoc mesenteroides subsp.
          cremoris ATCC 19254]
 gi|227351270|gb|EEJ41557.1| possible DNA repair protein [Leuconostoc mesenteroides subsp.
          cremoris ATCC 19254]
          Length = 98

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 51/96 (53%)

Query: 2  FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           LD    +I  EV   GT+  V    REI QR L+ +A   ++ HNHPSGN  PS+ADI 
Sbjct: 1  MLDTQLNVIGWEVVFVGTLSQVQTSPREIFQRVLKANAFGFMIAHNHPSGNIMPSNADIT 60

Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +Q +    + +++ + D  I+ ++ + S    + +
Sbjct: 61 FSQRLAIIGHQMDLRLFDSFIVTQNEYWSMSENQQL 96


>gi|196039378|ref|ZP_03106684.1| DNA repair protein [Bacillus cereus NVH0597-99]
 gi|196030005|gb|EDX68606.1| DNA repair protein [Bacillus cereus NVH0597-99]
          Length = 208

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 44/78 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVH 78
            +T+ ++     + I + 
Sbjct: 189 EVTKRLVECGRIIGIEML 206


>gi|304383349|ref|ZP_07365815.1| DNA repair protein RadC [Prevotella marshii DSM 16973]
 gi|304335517|gb|EFM01781.1| DNA repair protein RadC [Prevotella marshii DSM 16973]
          Length = 232

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L ++++  LI     S G +    + +R +++  L  +AT++ LVHNHPS +P PS  D 
Sbjct: 136 LLMNQNYRLIRPFRISHGGLSDTFIDVRIVIREALLCNATTLALVHNHPSNHPQPSHQDD 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T+ I    + +++   DHIII    + S+     +
Sbjct: 196 SITRQIKAACDTMHLHFLDHIIIVDGRYYSYCEEGRL 232


>gi|149278589|ref|ZP_01884725.1| DNA repair protein [Pedobacter sp. BAL39]
 gi|149230584|gb|EDM35967.1| DNA repair protein [Pedobacter sp. BAL39]
          Length = 155

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L +DK   ++       G +D V V  + +    +   A++I+L HNHPSG   PS ADI
Sbjct: 57  LLIDKRMSVLGIVTIGSGGLDGVYVDPKMVFAPAIISGASAIVLAHNHPSGEVTPSPADI 116

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T +++T    L++ V DH+I+ +  + SF   ++I
Sbjct: 117 KLTNDLVTLGEILHVKVLDHLIVTRGHYFSFIDNQLI 153


>gi|312870434|ref|ZP_07730554.1| DNA repair protein RadC [Lactobacillus oris PB013-T2-3]
 gi|311093991|gb|EFQ52315.1| DNA repair protein RadC [Lactobacillus oris PB013-T2-3]
          Length = 205

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 50/95 (52%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
             D HN +I  +   +G      +Y  +I    L  SAT I++VHNHPSG+  PS+ D+ 
Sbjct: 110 CTDVHNDVIDYKTVFKGGQSECLLYPDQIFAYALRQSATGIVMVHNHPSGDVKPSEQDLR 169

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
             + +      L + + D +I+G++ + S++  ++
Sbjct: 170 FAKRLERGSRILGLQMLDFLIVGQEQYFSWRESQL 204


>gi|296111237|ref|YP_003621619.1| DNA repair protein [Leuconostoc kimchii IMSNU 11154]
 gi|295832769|gb|ADG40650.1| DNA repair protein [Leuconostoc kimchii IMSNU 11154]
          Length = 203

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 49/96 (51%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD    +I  E    GT+ HV    REI QR L+ +A   ++VHNHPSGN  PSDADI 
Sbjct: 104 LLDAQLNVIGWETVFVGTLTHVQASPREIFQRVLQANALGFMIVHNHPSGNLKPSDADIQ 163

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +Q +      +   + D  I+ +D++ S      +
Sbjct: 164 FSQRLKVLGEQMASPMFDSFIVTRDSYWSMSENNQL 199


>gi|315641661|ref|ZP_07896724.1| DNA repair protein RadC [Enterococcus italicus DSM 15952]
 gi|315482589|gb|EFU73121.1| DNA repair protein RadC [Enterococcus italicus DSM 15952]
          Length = 153

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L+    ++       G+++      REIV+  L  +A +II+ HNHPS +  PS  D  
Sbjct: 53  CLNTKGEVVNISTVHIGSVNQSLAVPREIVKTALLCNAVNIIVAHNHPSNSTEPSREDRR 112

Query: 62  MTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLR 95
            T+N++     L I + DHIII    ++ S +   
Sbjct: 113 FTKNLLDACQLLQIGLRDHIIIAADGSYSSMRRDG 147


>gi|126175757|ref|YP_001051906.1| DNA repair protein RadC [Shewanella baltica OS155]
 gi|125998962|gb|ABN63037.1| DNA repair protein RadC [Shewanella baltica OS155]
          Length = 147

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/91 (36%), Positives = 55/91 (60%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L   + +   EV + G+++ + +   E+++  + L+  S+ILVHNHPSG+P PS +DI  
Sbjct: 51  LTTQHTINCVEVVATGSVNGISMRPVEVLRTAVILNMPSVILVHNHPSGDPTPSTSDIQF 110

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           T+ +I     L+I V DH+IIG + F S + 
Sbjct: 111 TRKVIECAKVLDINVLDHVIIGLNRFTSLRE 141


>gi|292670113|ref|ZP_06603539.1| DNA repair protein RadC [Selenomonas noxia ATCC 43541]
 gi|292648301|gb|EFF66273.1| DNA repair protein RadC [Selenomonas noxia ATCC 43541]
          Length = 85

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/81 (37%), Positives = 43/81 (53%)

Query: 15 QSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLN 74
           S GT+ +  V+ RE+ +  +   A  II  HNHPSG+P PS  D  +T+ +      L 
Sbjct: 3  VSAGTLTNTLVHPREVFEPAIRCGAAHIIAAHNHPSGDPAPSAEDHRLTRVLCEAGKVLG 62

Query: 75 IIVHDHIIIGKDAFVSFKGLR 95
          I V DH+I+  D+F SF    
Sbjct: 63 IPVTDHVIVAGDSFFSFAEAG 83


>gi|162447226|ref|YP_001620358.1| DNA repair protein [Acholeplasma laidlawii PG-8A]
 gi|161985333|gb|ABX80982.1| DNA repair protein [Acholeplasma laidlawii PG-8A]
          Length = 217

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 55/95 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    L+ +E    GT   + V ++++ +  + + A  II+VHNHPSG+  PS AD 
Sbjct: 119 LCLDIKGNLLKNETIYMGTTSSIQVSVKDLFKSAVRIGAFGIIVVHNHPSGDSTPSQADD 178

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T+ I      L+I + DHIIIG++ F S++  R
Sbjct: 179 KLTKLIKNAGEVLSIELIDHIIIGRNEFFSYRRQR 213


>gi|298479820|ref|ZP_06998020.1| DNA repair protein RadC [Bacteroides sp. D22]
 gi|298274210|gb|EFI15771.1| DNA repair protein RadC [Bacteroides sp. D22]
          Length = 154

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++ N ++     S G I    V +R I+Q  L  +AT +IL HNHPSG+  PS  D 
Sbjct: 57  VLLNQSNRVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 116

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
            +T+ +      + I V DH+I+  +  + S+     +
Sbjct: 117 ALTEKVKKAAELMEIHVADHVILSPEKEYYSYYDEGKL 154


>gi|210610373|ref|ZP_03288378.1| hypothetical protein CLONEX_00568 [Clostridium nexile DSM 1787]
 gi|240147637|ref|ZP_04746238.1| DNA repair protein RadC [Roseburia intestinalis L1-82]
 gi|283795835|ref|ZP_06344988.1| DNA repair protein RadC [Clostridium sp. M62/1]
 gi|210152523|gb|EEA83529.1| hypothetical protein CLONEX_00568 [Clostridium nexile DSM 1787]
 gi|257200164|gb|EEU98448.1| DNA repair protein RadC [Roseburia intestinalis L1-82]
 gi|291076466|gb|EFE13830.1| DNA repair protein RadC [Clostridium sp. M62/1]
 gi|291525593|emb|CBK91180.1| DNA repair proteins [Eubacterium rectale DSM 17629]
 gi|291526642|emb|CBK92228.1| DNA repair proteins [Eubacterium rectale M104/1]
 gi|291536727|emb|CBL09839.1| DNA repair proteins [Roseburia intestinalis M50/1]
 gi|291540190|emb|CBL13301.1| DNA repair proteins [Roseburia intestinalis XB6B4]
          Length = 179

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 8   ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNII 67
             I     S G+++    + RE+ +  +  +A S++L+H HPSGN  PS AD  MT  + 
Sbjct: 60  KPINVHFASVGSLNEAMAHPRELFKSSILSNAASMMLIHCHPSGNVFPSKADTMMTDRMN 119

Query: 68  TTLNPLNIIVHDHIIIGKD--AFVSFKGLRII 97
                + I + DHII+G D   F SF+   +I
Sbjct: 120 KLCELMGIPLIDHIIVGGDNREFFSFREKGMI 151


>gi|229175136|ref|ZP_04302652.1| DNA repair protein radC [Bacillus cereus MM3]
 gi|228608272|gb|EEK65578.1| DNA repair protein radC [Bacillus cereus MM3]
          Length = 223

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 44/78 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 144 LYLNTKNQVIHRQTVFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 203

Query: 61  NMTQNIITTLNPLNIIVH 78
            +T+ ++     + I + 
Sbjct: 204 EVTKRLVECGQIIGIELI 221


>gi|118479620|ref|YP_896771.1| DNA repair protein RadC [Bacillus thuringiensis str. Al Hakam]
 gi|118418845|gb|ABK87264.1| DNA replication and repair protein RadC [Bacillus thuringiensis
           str. Al Hakam]
          Length = 208

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 44/78 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDI 188

Query: 61  NMTQNIITTLNPLNIIVH 78
            +T+ ++     + I + 
Sbjct: 189 EVTKRLVECGRIIGIEIL 206


>gi|326693277|ref|ZP_08230282.1| DNA repair protein [Leuconostoc argentinum KCTC 3773]
          Length = 212

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 50/96 (52%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD    +I  E    G++ HV    REI QR L+ +A   +++HNHPSGN  PSD+D+ 
Sbjct: 106 LLDAQLNVIGWETIFVGSLTHVQASPREIFQRVLKANALGFMMIHNHPSGNVTPSDSDLQ 165

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +Q +      L + + D  I+  D++ S    + +
Sbjct: 166 FSQQLQNLGTQLGMPMFDSFIVTGDSYWSMSENQQL 201


>gi|240145831|ref|ZP_04744432.1| DNA repair protein RadC [Roseburia intestinalis L1-82]
 gi|257202052|gb|EEV00337.1| DNA repair protein RadC [Roseburia intestinalis L1-82]
          Length = 158

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L      I     S G+++    + RE+ +  +  +A S++L+H HPSGN  PS AD  M
Sbjct: 55  LSSDLKPINVHFASVGSLNEAMAHPRELFKSSILSNAASMMLIHCHPSGNIFPSKADTMM 114

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDA--FVSFKGLRII 97
           T  +      + I + DHII+G D   F SFK   +I
Sbjct: 115 TDRMNKLCELIGIPLLDHIIVGGDNRAFFSFKEKGMI 151


>gi|149276842|ref|ZP_01882985.1| DNA repair protein [Pedobacter sp. BAL39]
 gi|149232511|gb|EDM37887.1| DNA repair protein [Pedobacter sp. BAL39]
          Length = 155

 Score =  100 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L +DK   ++       G +D V V  + +    +   A++I+L HNHPSG   PS ADI
Sbjct: 57  LLIDKRMSVLGIVTIGSGGLDGVYVDPKMVFAPAIISGASAIVLAHNHPSGEVTPSPADI 116

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T +++T    L++ V DH+I+ +  + SF    +I
Sbjct: 117 KLTNDLVTLGEILHVKVLDHLIVTRGHYYSFIDNHLI 153


>gi|33596472|ref|NP_884115.1| DNA repair protein RadC [Bordetella parapertussis 12822]
 gi|39931840|sp|Q7W9B6|Y1850_BORPA RecName: Full=UPF0758 protein BPP1850
 gi|33566241|emb|CAE37151.1| DNA repair protein [Bordetella parapertussis]
          Length = 225

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LI     +RGT+    +Y REIV+  L   A ++IL HNHP G    S ADI
Sbjct: 129 LYLDARLKLIICAEVARGTLTQAQIYPREIVREALRHHAAALILAHNHPGGTAAASAADI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I   L  +++ + DH+I+   A VS      +
Sbjct: 189 AMTRQIRQALALVDVRLIDHVIVAGAATVSMAAQGHL 225


>gi|82523883|emb|CAI78606.1| DNA repair protein [uncultured delta proteobacterium]
          Length = 219

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 45/92 (48%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N ++   V + G ++   V+ RE+    +   A+SII+ HNHPSG+  PS  D   
Sbjct: 125 LNGANEVLNVRVITIGLVNKSQVHPREVFADVIVERASSIIIAHNHPSGSLTPSSEDRET 184

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
           T  I    N L I + DHII     + SF   
Sbjct: 185 TIRIKDAGNILGINLLDHIIFNNKGYYSFLEN 216


>gi|330997965|ref|ZP_08321799.1| DNA repair protein RadC [Paraprevotella xylaniphila YIT 11841]
 gi|329569569|gb|EGG51339.1| DNA repair protein RadC [Paraprevotella xylaniphila YIT 11841]
          Length = 147

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L++   L+     SR  ID   V IR ++Q  L   A+ IIL HNHPSG+   S  D 
Sbjct: 51  MYLNRAGKLLGVSCISRSGIDCTVVDIRIVLQTALVSHASGIILSHNHPSGSTVASTQDN 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      + I + DHII+ +D ++S+    ++
Sbjct: 111 NLTSQLKKGCEAIGIRLLDHIILTEDTYLSYTDEGML 147


>gi|261881165|ref|ZP_06007592.1| DNA repair protein RadC [Prevotella bergensis DSM 17361]
 gi|270332033|gb|EFA42819.1| DNA repair protein RadC [Prevotella bergensis DSM 17361]
          Length = 228

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 45/97 (46%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L +++   LI     S G +    V IR I++  L  + T + + HNHPSGN  PS  D 
Sbjct: 132 LLMNQAFKLIKAIPISHGGMTETAVDIRVIMKHALLNNTTVMAVCHNHPSGNTCPSMHDD 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I      + I   DH+II    + S+     +
Sbjct: 192 RLTQQIKRACETMRICFLDHVIITDGQYYSYHEEGKL 228


>gi|160890734|ref|ZP_02071737.1| hypothetical protein BACUNI_03179 [Bacteroides uniformis ATCC 8492]
 gi|237708245|ref|ZP_04538726.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|156859733|gb|EDO53164.1| hypothetical protein BACUNI_03179 [Bacteroides uniformis ATCC 8492]
 gi|229457798|gb|EEO63519.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 147

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L++   L+     SR  ID   V IR ++Q  L   A+ IIL HNHPSG+   S  D 
Sbjct: 51  MYLNRAGKLLGVSCISRSGIDCTVVDIRIVLQTALVSHASGIILSHNHPSGSTVASTQDN 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      + I + DHII+ +D ++S+    ++
Sbjct: 111 NLTSQLKKGCEAIGIRLLDHIILTEDTYLSYTDEGML 147


>gi|330719369|ref|ZP_08313969.1| DNA repair protein [Leuconostoc fallax KCTC 3537]
          Length = 218

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 51/95 (53%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD    +I  EV   GT+ HV    REI QR L  +A   ++VHNHPSGN  PS ADI  
Sbjct: 115 LDAQLNIINWEVVFVGTLTHVQASPREIFQRLLRTNAYGFMIVHNHPSGNLKPSKADIQF 174

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +Q ++T    ++I + D  I+  D + S    + +
Sbjct: 175 SQKLVTLGQQMDIHMFDSFIVSCDGYWSMSENQQL 209


>gi|33602234|ref|NP_889794.1| DNA repair protein RadC [Bordetella bronchiseptica RB50]
 gi|39931851|sp|Q7WHF0|Y3258_BORBR RecName: Full=UPF0758 protein BB3258
 gi|33576673|emb|CAE33750.1| DNA repair protein [Bordetella bronchiseptica RB50]
          Length = 225

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LI     +RGT+    +Y REIV+  L   A ++IL HNHP G    S ADI
Sbjct: 129 LYLDARLKLIICAEVARGTLTQAQIYPREIVREALRHHAAALILAHNHPGGTAAASAADI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I   L  +++ + DH+I+   A VS      +
Sbjct: 189 AMTRQIRQALALIDVRLIDHVIVAGAATVSMAAQGHL 225


>gi|154482876|ref|ZP_02025324.1| hypothetical protein EUBVEN_00572 [Eubacterium ventriosum ATCC
           27560]
 gi|149736304|gb|EDM52190.1| hypothetical protein EUBVEN_00572 [Eubacterium ventriosum ATCC
           27560]
          Length = 180

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 2/97 (2%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L   N  I   + S G+++   V  REI +  +  +A  ++L+HNHPSG+  PS  DI +
Sbjct: 55  LKSDNTPINCTMASMGSLNQSIVSPREIFKASILSNAAHMLLIHNHPSGSLKPSKEDIEI 114

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDA--FVSFKGLRII 97
           T  +I   + + I + DHII+G D   + S +   I+
Sbjct: 115 TDRLIKLTDLMEIPLLDHIIVGGDEAQYFSMREKGIM 151


>gi|154483970|ref|ZP_02026418.1| hypothetical protein EUBVEN_01678 [Eubacterium ventriosum ATCC
           27560]
 gi|149735012|gb|EDM50898.1| hypothetical protein EUBVEN_01678 [Eubacterium ventriosum ATCC
           27560]
          Length = 178

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           +     +   + S G ID      REI++  +  +A +++++HNHPS    PS  DI  T
Sbjct: 51  NSKLQPLNFNLVSIGAIDTTIASPREILKSAILSNAANMMILHNHPSNILEPSKEDIRTT 110

Query: 64  QNIITTLNPLNIIVHDHIIIG--KDAFVSFKGLRII 97
             ++   N + I + DHII+G  K  + S +  +++
Sbjct: 111 AKLVDICNLVGIPLLDHIIVGPDKGRYFSLRDKQLV 146


>gi|103487967|ref|YP_617528.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256]
 gi|98978044|gb|ABF54195.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256]
          Length = 354

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 41/88 (46%), Positives = 54/88 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    LIADE   +GTI HV +Y R I +R +EL A +IILVHNHPSG+P PS+AD+
Sbjct: 124 LFLDPARRLIADEQLQQGTIGHVAIYPRTIFRRAVELDAAAIILVHNHPSGDPTPSEADV 183

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAF 88
             T  +      L I + +HI++     
Sbjct: 184 ATTARLAAIGRALEIQLLEHIVVALRGH 211


>gi|258544459|ref|ZP_05704693.1| DNA repair protein RadC [Cardiobacterium hominis ATCC 15826]
 gi|258520300|gb|EEV89159.1| DNA repair protein RadC [Cardiobacterium hominis ATCC 15826]
          Length = 224

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 54/95 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ +  IA E  + G    VPV +R+++   L   A ++IL HNHP+G+  PS  D 
Sbjct: 128 LFLNQQHGFIAFERLAAGAAAKVPVPVRQLIASALHHHAAAVILAHNHPAGSGAPSAEDR 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           ++T+++   L  ++I + DH I+  +  VS +   
Sbjct: 188 DVTRHLDDALALMDIRLLDHFIVAGNEMVSMRERG 222


>gi|217076565|ref|YP_002334281.1| DNA repair protein [Thermosipho africanus TCF52B]
 gi|217036418|gb|ACJ74940.1| DNA repair protein [Thermosipho africanus TCF52B]
          Length = 213

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+     I+ +  + G  D    + REI +  ++ SA+ +++VHNHPSG+  PS  D  +
Sbjct: 120 LNSKLYEISTKDITIGLTDTSLAHPREIYREAIKNSASYVVVVHNHPSGDVRPSKEDREV 179

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T  I      + I + DH+IIG + F SFK  +++
Sbjct: 180 TLKIKKAGEIIGIKLLDHVIIG-NGFYSFKHNKLL 213


>gi|295136238|ref|YP_003586914.1| DNA repair protein RadC [Zunongwangia profunda SM-A87]
 gi|294984253|gb|ADF54718.1| DNA repair protein RadC [Zunongwangia profunda SM-A87]
          Length = 147

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  NI+      S G I+   V IR +    L+  +T+II+ HNHPSG    S  D 
Sbjct: 50  MLLNNSNIVKGICQISTGGINATLVDIRIMFALILKSLSTAIIVCHNHPSGKLQASQVDK 109

Query: 61  NMTQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97
            +T  I    + L+I + DH+II  +  ++SF    I+
Sbjct: 110 KLTSKIQKACDFLDIKLLDHLIINSEGNYLSFADEGIL 147


>gi|291529737|emb|CBK95323.1| DNA repair proteins [Eubacterium rectale M104/1]
          Length = 158

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 41/95 (43%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L      I       G+     +  REI  R     A S I+ HNHPS +  PS  DI  
Sbjct: 61  LTTKCKPIGVFDVFHGSAQTCLMNTREIFVRLCICGAVSFIVAHNHPSDDCTPSADDIRS 120

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T  + +  N ++I + DHIII      SFK   ++
Sbjct: 121 TSKLASAANMMSIPLLDHIIISPKEMFSFKEHNML 155


>gi|291166284|gb|EFE28330.1| DNA repair protein RadC [Filifactor alocis ATCC 35896]
          Length = 176

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 28/77 (36%), Positives = 40/77 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD  N +I  E  S GTI+   V+ REI +  +   A +IIL HNHPSG+  PS  D 
Sbjct: 97  VFLDTKNRVIDYEEVSLGTINSSIVHPREIFRGAVINKANAIILCHNHPSGDLTPSGEDK 156

Query: 61  NMTQNIITTLNPLNIIV 77
            +T  +      + +  
Sbjct: 157 TITLRLKEAGKLMGLRF 173


>gi|303327272|ref|ZP_07357714.1| DNA repair protein RadC [Desulfovibrio sp. 3_1_syn3]
 gi|302863260|gb|EFL86192.1| DNA repair protein RadC [Desulfovibrio sp. 3_1_syn3]
          Length = 230

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/87 (36%), Positives = 48/87 (55%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D  N LIA E   RG I+ VPV  R++++  L   A+ IIL HNHP G+P PS  D+ +T
Sbjct: 137 DAQNGLIAWERLRRGGINAVPVQPRDVLETALTHKASGIILAHNHPGGSPGPSKPDLMLT 196

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVS 90
           + +      + +   DH+I+ +    S
Sbjct: 197 EELQRLAPRMGLRFLDHVIVTEGICYS 223


>gi|225630427|ref|YP_002727218.1| DNA repair protein RadC [Wolbachia sp. wRi]
 gi|225592408|gb|ACN95427.1| DNA repair protein RadC [Wolbachia sp. wRi]
          Length = 219

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD+   LI + +Q  GTID VP+Y+REI+++ L + A+SI + HNHPSG+  PS  D 
Sbjct: 123 IYLDRSGHLIYEYIQDCGTIDRVPLYVREIIKQGLLIDASSIAISHNHPSGDTEPSKEDE 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + T  +  T   + + + DHII+ + +  SF    ++
Sbjct: 183 DNTLTLAATCENVGMKLIDHIIVTQKSHFSFYDSGLL 219


>gi|33592363|ref|NP_880007.1| DNA repair protein RadC [Bordetella pertussis Tohama I]
 gi|39931828|sp|Q7VYS4|Y1235_BORPE RecName: Full=UPF0758 protein BP1235
 gi|33572008|emb|CAE41531.1| DNA repair protein [Bordetella pertussis Tohama I]
          Length = 225

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD    LI     +RGT+    +Y REIV+  L   A ++IL HNHP G    S ADI
Sbjct: 129 LYLDARLKLIICAEVARGTLTQAQIYPREIVREALRHHAAALILTHNHPGGTAAASAADI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+ I   L  +++ + DH+I+   A VS      +
Sbjct: 189 AMTRQIRQALALIDVRLIDHVIVAGAATVSMAAQGHL 225


>gi|153006774|ref|YP_001381099.1| DNA repair protein RadC [Anaeromyxobacter sp. Fw109-5]
 gi|152030347|gb|ABS28115.1| DNA repair protein RadC [Anaeromyxobacter sp. Fw109-5]
          Length = 222

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS-GNPNPSDAD 59
           + LD    LI     + G++   PV  R+ ++  + + A  ++ VHNHPS G+P+PS  D
Sbjct: 123 VLLDVRGRLIKTVKIAEGSLTQCPVSPRDALREPVRIGAHGVVFVHNHPSSGDPSPSADD 182

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            ++T  +    + + ++  DH+I+    + SF    
Sbjct: 183 ADLTDRLRAAADLVGVLARDHVIVAASGYYSFVEAG 218


>gi|260593482|ref|ZP_05858940.1| DNA repair protein RadC [Prevotella veroralis F0319]
 gi|260534598|gb|EEX17215.1| DNA repair protein RadC [Prevotella veroralis F0319]
          Length = 228

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L + ++  LI  +  S G +   P+ IR +++  L  + T +   HNHPSGN +PS  D 
Sbjct: 132 LMMKQNFRLIEAKRISIGGLTMAPIDIRLMMKEALMKNTTILAFCHNHPSGNTSPSHEDD 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I      L+I   DH+++    + S++    +
Sbjct: 192 LLTTRIRKACELLSIHFADHVVLTDGNYYSYREEGRL 228


>gi|60681272|ref|YP_211416.1| putative DNA repair protein [Bacteroides fragilis NCTC 9343]
 gi|60492706|emb|CAH07479.1| putative DNA repair protein [Bacteroides fragilis NCTC 9343]
          Length = 147

 Score = 99.7 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+    L+     SR  ++   V IR ++Q  L   A+ IIL HNHPSG+   S  D 
Sbjct: 51  MYLNGAGRLLGVSCVSRSGMNSTVVDIRIVLQTALVSHASGIILSHNHPSGSTVASTPDN 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      + I + DHII+  D ++S+    ++
Sbjct: 111 NLTSQLKKGCEAIGIQLLDHIILTGDTYLSYMDEGML 147


>gi|323343922|ref|ZP_08084149.1| DNA repair protein RadC [Prevotella oralis ATCC 33269]
 gi|323095741|gb|EFZ38315.1| DNA repair protein RadC [Prevotella oralis ATCC 33269]
          Length = 242

 Score = 99.4 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L ++++  LI     S G I    V +R I++  +  +AT + L HNHPS N   S  D 
Sbjct: 146 LLMNQNFKLIKSMKLSHGGISETVVDVRVIIREAVLANATVLALCHNHPSNNALSSAEDD 205

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ +    + + I   DH+II   +F S++    +
Sbjct: 206 RLTQRVKKACDIMRIYFLDHLIITDGSFYSYRERGRL 242


>gi|331085143|ref|ZP_08334229.1| hypothetical protein HMPREF0987_00532 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407926|gb|EGG87416.1| hypothetical protein HMPREF0987_00532 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 168

 Score = 99.4 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/92 (32%), Positives = 53/92 (57%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD  +  ++ EV + G ++   V +RE+ +  +  +A SII+ HNHPSG+ +PS +D+ 
Sbjct: 63  CLDGKSQPVSMEVVAVGMVNQCLVGMREVFKNAILSNAVSIIVFHNHPSGDSHPSSSDLE 122

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           +++ +      + I V DHI++G D F S   
Sbjct: 123 ISKKLRQAGILIGIEVLDHIVLGDDEFHSIAN 154


>gi|260173537|ref|ZP_05759949.1| DNA repair protein [Bacteroides sp. D2]
          Length = 151

 Score = 99.4 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++ N ++     S G I    V +R I+Q  L  +AT +IL HNHPSG+  PS  D 
Sbjct: 54  VLLNQSNRVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
            +T+ +      + I + DH+I+  +  + S+     +
Sbjct: 114 ALTEKVKKAAELMEIHIADHVILSPEKEYYSYNDEGKL 151


>gi|222825167|dbj|BAH22324.1| DNA repair protein RadC [Wolbachia endosymbiont of Cadra cautella]
          Length = 219

 Score = 99.4 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD+   LI + +Q  GTID VP+Y+REI+++ L + A+SI + HNHPSG+  PS  D 
Sbjct: 123 VYLDRSGHLIYEYIQDCGTIDRVPLYVREIIKQGLLIDASSIAISHNHPSGDTEPSKEDE 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + T  +  T   + + + DHII+ + +  SF    ++
Sbjct: 183 DNTLTLAATCENVGMKLIDHIIVTQKSHFSFYDSGLL 219


>gi|71066389|ref|YP_265116.1| DNA repair protein RadC [Psychrobacter arcticus 273-4]
 gi|123748093|sp|Q4FQM6|Y1834_PSYA2 RecName: Full=UPF0758 protein Psyc_1834
 gi|71039374|gb|AAZ19682.1| probable DNA repair protein RadC [Psychrobacter arcticus 273-4]
          Length = 227

 Score = 99.4 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 50/96 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    LI  E+   G I    V I+ +++  L  + + +I+ HNHP  +  PS AD 
Sbjct: 128 LCLDNALNLINFEILFTGGISSCSVCIKHVLRHALSHATSQLIIAHNHPHTDATPSTADN 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +T  +    + +++ + DH+I+G++  +S+    +
Sbjct: 188 LLTYELKKACDLIDLSLIDHVIVGRNETLSYAENCL 223


>gi|325860385|ref|ZP_08173497.1| DNA repair protein RadC [Prevotella denticola CRIS 18C-A]
 gi|327312589|ref|YP_004328026.1| DNA repair protein RadC [Prevotella denticola F0289]
 gi|325482043|gb|EGC85064.1| DNA repair protein RadC [Prevotella denticola CRIS 18C-A]
 gi|326945677|gb|AEA21562.1| DNA repair protein RadC [Prevotella denticola F0289]
          Length = 232

 Score = 99.4 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L + ++  LI  +  S G +   PV IR +++  L  + T +   HNHPSG+ NPS  D 
Sbjct: 136 LMMKQNFRLIEAKRISTGGLTMAPVDIRLMMKEALLKNTTILAFCHNHPSGSTNPSREDD 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T +I    N L I   DH+I+   ++ S++    +
Sbjct: 196 KLTTSIQKACNLLCIHFADHVILADGSYFSYREEGKL 232


>gi|256840461|ref|ZP_05545969.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256737733|gb|EEU51059.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 147

 Score = 99.0 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+    L+     SR  ++   V IR ++Q  L   A+ IIL HNHPSG+   S  D 
Sbjct: 51  MYLNGAGRLLGVSCVSRSGMNSTVVDIRIVLQTALVSHASGIILSHNHPSGSTVASTPDN 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      + I + DHII+  D ++S+    ++
Sbjct: 111 NLTSQLKKGCEAIGIQLLDHIILTGDTYLSYMDEGML 147


>gi|154494083|ref|ZP_02033403.1| hypothetical protein PARMER_03428 [Parabacteroides merdae ATCC
           43184]
 gi|154086343|gb|EDN85388.1| hypothetical protein PARMER_03428 [Parabacteroides merdae ATCC
           43184]
          Length = 226

 Score = 99.0 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 49/94 (52%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           ++ +++I     S+G I      +R I++  +   A  IIL HNHPSGNP PS  D  +T
Sbjct: 133 NRSSLVIEKVKISQGGISETSADLRIILKAAINALAVGIILCHNHPSGNPRPSRQDDLLT 192

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           Q++      L I + DHI++   ++ S+     +
Sbjct: 193 QHLRDAARLLEIQLLDHIVLADGSYYSYSDEGTL 226


>gi|227544227|ref|ZP_03974276.1| DNA repair protein RadC [Lactobacillus reuteri CF48-3A]
 gi|300908222|ref|ZP_07125688.1| DNA repair protein RadC [Lactobacillus reuteri SD2112]
 gi|227185798|gb|EEI65869.1| DNA repair protein RadC [Lactobacillus reuteri CF48-3A]
 gi|300894649|gb|EFK88005.1| DNA repair protein RadC [Lactobacillus reuteri SD2112]
          Length = 210

 Score = 99.0 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 51/96 (53%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
             D HN +I  ++   G      +Y  +I Q  L  SA  II++HNHP+G+ +PS  D +
Sbjct: 110 CTDIHNEIIDWKILFVGGGCECILYPDKIFQYALRCSAQGIIMIHNHPTGDIHPSKQDES 169

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            T+ +      + + + D +I+G+D + S++   ++
Sbjct: 170 FTRRLERGCEIIGLHLVDFMIVGRDTYHSWREASLV 205


>gi|330429692|gb|AEC21026.1| DNA repair protein radC-like protein [Pusillimonas sp. T7-7]
          Length = 83

 Score = 99.0 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/81 (39%), Positives = 47/81 (58%)

Query: 15 QSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLN 74
           S GT+    VY REIV+  L L A +II+ HNHPSG P PS+AD+ +T+++   L  ++
Sbjct: 1  MSHGTLTQASVYPREIVKTALRLDAAAIIMSHNHPSGIPKPSEADLALTRHLKHALTLVD 60

Query: 75 IIVHDHIIIGKDAFVSFKGLR 95
          + + DHII+      S     
Sbjct: 61 VRLLDHIIVTGQNTTSLAERG 81


>gi|304311413|ref|YP_003811011.1| DNA repair protein similar to radC-family [gamma proteobacterium
           HdN1]
 gi|304313154|ref|YP_003812752.1| DNA repair protein similar to RadC-family [gamma proteobacterium
           HdN1]
 gi|301797146|emb|CBL45362.1| DNA repair protein similar to radC-family [gamma proteobacterium
           HdN1]
 gi|301798887|emb|CBL47123.1| DNA repair protein similar to RadC-family [gamma proteobacterium
           HdN1]
          Length = 166

 Score = 99.0 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD  + +I       GT+D   V+ R I+Q+ LE++A ++I  HNHPSG   PS +D 
Sbjct: 71  IYLDAGHCVIEMVKHFHGTVDSSHVHARPIMQKALEINAVAVIFCHNHPSGRAEPSASDK 130

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T ++IT L  +++ V DH+++G +   S  GL ++
Sbjct: 131 AITNHLITVLKYVDVRVLDHLVVG-ETVASMAGLGMM 166


>gi|266619862|ref|ZP_06112797.1| DNA repair protein RadC [Clostridium hathewayi DSM 13479]
 gi|288868571|gb|EFD00870.1| DNA repair protein RadC [Clostridium hathewayi DSM 13479]
          Length = 215

 Score = 99.0 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 54/96 (56%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +LD    +I+ E  + GT+D  P + RE+++R L+L A  ++L HNHP  +   S+ DI 
Sbjct: 95  YLDSGCGVISCEKVAEGTVDRSPFFTRELLKRVLQLDAVGVVLAHNHPGNSLKASEQDIA 154

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T  +   L  L I V DHII+G D  VS     II
Sbjct: 155 ITNQLRDALGALAIKVFDHIIVGADRAVSLYQEGII 190


>gi|315921807|ref|ZP_07918047.1| DNA repair protein [Bacteroides sp. D2]
 gi|313695682|gb|EFS32517.1| DNA repair protein [Bacteroides sp. D2]
          Length = 154

 Score = 98.6 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++ N ++     S G I    V +R I+Q  L  +AT +IL HNHPSG+  PS  D 
Sbjct: 57  VLLNQSNRVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 116

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
            +T+ +      + I + DH+I+  +  + S+     +
Sbjct: 117 ALTEKVKKAAELMEIHIADHVILSPEKEYYSYNDEGKL 154


>gi|281420983|ref|ZP_06251982.1| DNA repair protein RadC [Prevotella copri DSM 18205]
 gi|281404901|gb|EFB35581.1| DNA repair protein RadC [Prevotella copri DSM 18205]
          Length = 229

 Score = 98.6 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L ++++  LI     S+G I      IR I++  +  +AT I   HNHPS NP PS AD 
Sbjct: 133 LMMNQNFKLIKASCISKGGITETATDIRLIIKEAVLNNATIIAFCHNHPSNNPQPSKADD 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +TQ I      + +   DH+II   AF S+     +
Sbjct: 193 VLTQKIAKACEIMRLFFMDHVIITDGAFYSYHDKGKL 229


>gi|281422132|ref|ZP_06253131.1| DNA repair protein RadC [Prevotella copri DSM 18205]
 gi|281403921|gb|EFB34601.1| DNA repair protein RadC [Prevotella copri DSM 18205]
          Length = 218

 Score = 98.6 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L ++++  LI     S G I    V +R I++  +  +AT + + HNHPS +P+PS AD 
Sbjct: 120 LLMNQNFRLIKHVPMSHGGITETAVDVRRIMREAVLNNATILAIAHNHPSNSPHPSKADD 179

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+++    + + I   DH+II    + S+     +
Sbjct: 180 MLTKSVKEACSIMRIFFMDHVIIADGCYFSYHDKGRL 216


>gi|257453116|ref|ZP_05618415.1| DNA primase TraC3 [Fusobacterium sp. 3_1_5R]
 gi|317059651|ref|ZP_07924136.1| DNA repair protein RadC [Fusobacterium sp. 3_1_5R]
 gi|313685327|gb|EFS22162.1| DNA repair protein RadC [Fusobacterium sp. 3_1_5R]
          Length = 1296

 Score = 98.6 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 54/94 (57%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           DK+N +   E   +GT++  PV ++ ++   L+ +   I ++HNHPSG P PS  DI +T
Sbjct: 426 DKNNKITNYETLFKGTVNSAPVDLKVLIPYLLDENIKGIQILHNHPSGIPKPSRKDIELT 485

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++I +     N  + DH I+GK+   SF+   ++
Sbjct: 486 RDIESLCKKFNKELLDHTIVGKEDIFSFQREGML 519


>gi|148543746|ref|YP_001271116.1| DNA repair protein RadC [Lactobacillus reuteri DSM 20016]
 gi|184153152|ref|YP_001841493.1| putative DNA repair protein [Lactobacillus reuteri JCM 1112]
 gi|227363274|ref|ZP_03847406.1| DNA repair protein RadC [Lactobacillus reuteri MM2-3]
 gi|325682118|ref|ZP_08161636.1| DNA repair protein RadC [Lactobacillus reuteri MM4-1A]
 gi|148530780|gb|ABQ82779.1| DNA repair protein RadC [Lactobacillus reuteri DSM 20016]
 gi|183224496|dbj|BAG25013.1| putative DNA repair protein [Lactobacillus reuteri JCM 1112]
 gi|227071730|gb|EEI10021.1| DNA repair protein RadC [Lactobacillus reuteri MM2-3]
 gi|324978762|gb|EGC15711.1| DNA repair protein RadC [Lactobacillus reuteri MM4-1A]
          Length = 210

 Score = 98.6 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 51/96 (53%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
             D HN +I  ++   G      +Y  +I Q  L  SA  II++HNHP+G+ +PS  D +
Sbjct: 110 CTDIHNEIIDWKILFVGGGCECILYPDKIFQYALRCSAQGIIMIHNHPTGDIHPSKQDES 169

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            T+ +      + + + D +I+G+D + S++   ++
Sbjct: 170 FTRRLERGCEIIGLHLVDFMIVGRDTYHSWREASLV 205


>gi|194468308|ref|ZP_03074294.1| DNA repair protein RadC [Lactobacillus reuteri 100-23]
 gi|194453161|gb|EDX42059.1| DNA repair protein RadC [Lactobacillus reuteri 100-23]
          Length = 210

 Score = 98.2 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 51/96 (53%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
             D HN +I  ++   G      +Y  +I Q  L  SA  II++HNHP+G+ +PS  D +
Sbjct: 110 CTDIHNEIIDWKILFVGGGCECILYPDKIFQYALRCSAQGIIMIHNHPTGDIHPSKQDES 169

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            T+ +      + + + D +I+G+D + S++   ++
Sbjct: 170 FTRRLERGCEIIGLHLVDFMIVGRDTYHSWREASLV 205


>gi|298484383|ref|ZP_07002542.1| DNA repair protein [Bacteroides sp. D22]
 gi|298269447|gb|EFI11049.1| DNA repair protein [Bacteroides sp. D22]
 gi|301165227|emb|CBW24798.1| putative DNA repair protein [Bacteroides fragilis 638R]
          Length = 147

 Score = 98.2 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 52/97 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L+    L+     SR  ++   V IR ++Q  L   A+ IIL HNHPSG+   S  D 
Sbjct: 51  MYLNGAGRLLGVSCVSRSGMNSTVVDIRIVLQTALVSHASGIILSHNHPSGSTVASTPDN 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           N+T  +      + I + DHII+ +DA++S+    ++
Sbjct: 111 NLTSQLKKGCEAIGIQLLDHIILTEDAYLSYMDEGML 147


>gi|210623724|ref|ZP_03294008.1| hypothetical protein CLOHIR_01959 [Clostridium hiranonis DSM 13275]
 gi|210153412|gb|EEA84418.1| hypothetical protein CLOHIR_01959 [Clostridium hiranonis DSM 13275]
          Length = 225

 Score = 98.2 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/93 (41%), Positives = 57/93 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I D   S GT++   V+ RE+ ++ ++ SA  IIL+HNHPSGN  PS+ DI
Sbjct: 129 VLLNTKNEIITDIDVSHGTLNSSLVHPREVFKQAIKKSANKIILIHNHPSGNVEPSNEDI 188

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           ++T  +I     + I V DHIIIG   + SFK 
Sbjct: 189 HITDRLIECGKIIGIEVIDHIIIGDGIYYSFKE 221


>gi|300957786|ref|ZP_07169970.1| DNA repair protein RadC domain protein [Escherichia coli MS
          175-1]
 gi|300315513|gb|EFJ65297.1| DNA repair protein RadC domain protein [Escherichia coli MS
          175-1]
          Length = 74

 Score = 98.2 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 46/73 (63%)

Query: 25 VYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIG 84
          V+ RE+++R L  +A +++L HNHPSG   PS AD  +T+ ++  L  ++I V DH+I+G
Sbjct: 2  VHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG 61

Query: 85 KDAFVSFKGLRII 97
           +   SF    ++
Sbjct: 62 GNQVFSFAEHGLL 74


>gi|86606346|ref|YP_475109.1| DNA repair protein RadC [Synechococcus sp. JA-3-3Ab]
 gi|86554888|gb|ABC99846.1| DNA repair protein RadC [Synechococcus sp. JA-3-3Ab]
          Length = 243

 Score = 97.8 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 52/94 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI  ++ +RGT      + RE  +  +   A+ I++ HNHPSG+ +PS  D+
Sbjct: 139 LHLDIKHRLIGQQIVTRGTATETLTHPRETFRSAIRQGASRILVAHNHPSGSLDPSPEDL 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ ++     L I V DH+I+G   F+S +  
Sbjct: 199 ALTRQLLQAGQLLQIPVLDHLILGGGQFLSLRQH 232


>gi|300957303|ref|ZP_07169528.1| DNA repair protein RadC domain protein [Escherichia coli MS
          175-1]
 gi|300315941|gb|EFJ65725.1| DNA repair protein RadC domain protein [Escherichia coli MS
          175-1]
          Length = 74

 Score = 97.8 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 45/73 (61%)

Query: 25 VYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIG 84
          V+ RE+++R L  +A ++IL HNHPSG   PS AD  +T+ ++  L  ++I V DH+I+G
Sbjct: 2  VHPREVIKRALYHNAAAVILAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVG 61

Query: 85 KDAFVSFKGLRII 97
               SF    ++
Sbjct: 62 GSQVFSFAEHGLL 74


>gi|58699615|ref|ZP_00374308.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533866|gb|EAL58172.1| DNA repair protein RadC [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 100

 Score = 97.8 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 60/97 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD+   LI + +Q  GTID VP+Y+REI+++ L + A+SI + HNHPSG+  PS  D 
Sbjct: 4   IYLDRSGHLIYEYIQDCGTIDRVPLYVREIIKQGLLIDASSIAISHNHPSGDTEPSKEDE 63

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + T  +  T   + + + DHII+ + +  SF    ++
Sbjct: 64  DNTLTLAATCENVGMKLIDHIIVTQKSHFSFYDSGLL 100


>gi|260173548|ref|ZP_05759960.1| DNA repair protein [Bacteroides sp. D2]
          Length = 151

 Score = 97.8 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++ N ++     S G I    V +R I+Q  L  +AT +IL HNHPSG+  PS  D 
Sbjct: 54  VLLNQSNRVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGL 94
            +T+ +      + I + DH+I+  ++ + S+   
Sbjct: 114 TLTERVKKAAELMEIHIADHVILSPENEYYSYYDE 148


>gi|163752783|ref|ZP_02159907.1| DNA repair protein [Kordia algicida OT-1]
 gi|161326515|gb|EDP97840.1| DNA repair protein [Kordia algicida OT-1]
          Length = 206

 Score = 97.8 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 49/91 (53%)

Query: 7   NILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNI 66
           N ++  E+ + G  + V     ++ +  +   A  +ILVHNHPSGN  PS  D ++T  +
Sbjct: 49  NTILFVELIAIGAQNRVNANPPDVFRMGIYKLAVRVILVHNHPSGNLKPSAQDKDITDRL 108

Query: 67  ITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +     +NI V DH+II +  F SFK   I+
Sbjct: 109 LKVGKLINIDVIDHLIITESGFTSFKDKGIM 139


>gi|149280713|ref|ZP_01886823.1| DNA repair protein [Pedobacter sp. BAL39]
 gi|149228537|gb|EDM33946.1| DNA repair protein [Pedobacter sp. BAL39]
          Length = 164

 Score = 97.4 bits (242), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +  +  ++++     + G I HV V  + I    +   AT I+L HNHPSG+  PS  D 
Sbjct: 55  VLFNCQSVVLGVMTVATGGITHVMVDPKLIFAAAVTSGATGILLAHNHPSGDLTPSIPDK 114

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T+ II       I V DH+I+  + + SF    +I
Sbjct: 115 QLTKRIIKLAELHQITVLDHLIVNSEDYFSFVEANLI 151


>gi|295135838|ref|YP_003586514.1| DNA repair protein RadC [Zunongwangia profunda SM-A87]
 gi|294983853|gb|ADF54318.1| DNA repair protein RadC [Zunongwangia profunda SM-A87]
          Length = 149

 Score = 97.0 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)

Query: 8   ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNII 67
            +      SRG I +  V +R I    L+  +T++IL HNHPSG   PS+ D ++T+ I 
Sbjct: 59  RVKGIFEVSRGGITYTLVDLRLIFGVILKSLSTAVILCHNHPSGTLLPSNPDKDLTRKIK 118

Query: 68  TTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
                 +I V DH+I+     + SF    ++
Sbjct: 119 NAAGLFDIKVLDHLILTPGGDYYSFADNGML 149


>gi|551992|gb|AAA26680.1| 25 kD protein (putative); putative [Staphylococcus aureus]
          Length = 82

 Score = 97.0 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/82 (37%), Positives = 43/82 (52%)

Query: 16 SRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNI 75
           +GT++   V+ REI    +  +A +II VHNHPSG+  PS  DI  T  +      L I
Sbjct: 1  FKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDIITTMRLKECGLILGI 60

Query: 76 IVHDHIIIGKDAFVSFKGLRII 97
           + DHIIIG + F S      +
Sbjct: 61 DLLDHIIIGDNRFTSLVEAGTL 82


>gi|325300758|ref|YP_004260674.1| DNA repair protein RadC [Bacteroides salanitronis DSM 18170]
 gi|324320311|gb|ADY38201.1| DNA repair protein RadC [Bacteroides salanitronis DSM 18170]
          Length = 146

 Score = 97.0 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + ++     I     S+GTI+   + +R + +  +E  AT +IL+HNHPSGN  PS  D 
Sbjct: 49  ILINSAGNTIGYAKISQGTINSTLIDVRLVAKYAIEALATGVILIHNHPSGNTRPSVDDS 108

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGLRII 97
           NM   +   L+ LNI + D III   + + SF     I
Sbjct: 109 NMATRLKKALDLLNIRLLDSIIITDTENYYSFSDEGFI 146


>gi|303231365|ref|ZP_07318099.1| putative DNA repair protein RadC [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513961|gb|EFL55969.1| putative DNA repair protein RadC [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 232

 Score = 97.0 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 51/96 (53%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L   N LI  E  S G +    V  R + ++ +  +A +IIL+HNHPSG+  PSD DI 
Sbjct: 136 MLTSRNKLIHIETISNGGLTSSLVEQRAVFRKAIACNAAAIILIHNHPSGDSRPSDDDIR 195

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+  ++    + I V DHI+IG   F S   +  +
Sbjct: 196 VTKLFVSAGQFMGIPVLDHIVIGDGEFTSLSEIGKL 231


>gi|218258236|ref|ZP_03474638.1| hypothetical protein PRABACTJOHN_00292 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225579|gb|EEC98229.1| hypothetical protein PRABACTJOHN_00292 [Parabacteroides johnsonii
           DSM 18315]
          Length = 248

 Score = 97.0 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 49/94 (52%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           ++ + +I     S+G        +R I++  +   AT IIL HNHPSGN  PS  D ++T
Sbjct: 155 NRSSFVIEKVKISQGGTSETSADLRIILKAAINALATGIILCHNHPSGNIRPSQQDDHLT 214

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           Q++      L++ + DHI++   ++ S+     +
Sbjct: 215 QHLRDAARLLDMQLLDHIVLTDGSYYSYSDEGTL 248


>gi|205825358|dbj|BAG71449.1| DNA repair protein RadC [Staphylococcus aureus]
          Length = 148

 Score = 97.0 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 51/96 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + ++  N     +  S G+I+   ++ REI +  +  +A SI+L HNHPSG+  PS  DI
Sbjct: 49  ICMNSKNEPTHIQTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDITPSPEDI 108

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           N+T+ ++     + I+ +DHII       S +   +
Sbjct: 109 NVTKRLMLISEMMGILFYDHIIFSDSNTYSIRQHDL 144


>gi|315921816|ref|ZP_07918056.1| DNA repair protein [Bacteroides sp. D2]
 gi|313695691|gb|EFS32526.1| DNA repair protein [Bacteroides sp. D2]
          Length = 154

 Score = 97.0 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++ N ++     S G I    V +R I+Q  L  +AT +IL HNHPSG+  PS  D 
Sbjct: 57  VLLNQSNRVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 116

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGL 94
            +T+ +      + I + DH+I+  ++ + S+   
Sbjct: 117 TLTERVKKAAELMEIHIADHVILSPENEYYSYYDE 151


>gi|167765535|ref|ZP_02437599.1| hypothetical protein CLOSS21_00029 [Clostridium sp. SS2/1]
 gi|317498487|ref|ZP_07956781.1| DNA repair protein RadC [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167712720|gb|EDS23299.1| hypothetical protein CLOSS21_00029 [Clostridium sp. SS2/1]
 gi|316894180|gb|EFV16368.1| DNA repair protein RadC [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 78

 Score = 97.0 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 42/77 (54%)

Query: 21 DHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDH 80
          +      RE+    L   A S++++HNHPSG+P PS  DI  T+ +      L I + DH
Sbjct: 2  NQTVASPRELFLEALRCEAVSVLMIHNHPSGDPTPSRQDILTTKRMKEAGEFLGIPLCDH 61

Query: 81 IIIGKDAFVSFKGLRII 97
          IIIG   ++SF+   ++
Sbjct: 62 IIIGDQTYLSFREEHMM 78


>gi|257080701|ref|ZP_05575062.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|256988731|gb|EEU76033.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
          Length = 99

 Score = 96.7 bits (240), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 40/74 (54%)

Query: 23 VPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHII 82
             + REI +  ++ S+  I+L HNHPSGNP PS  DI  T+ +      + I + DHII
Sbjct: 22 SIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDIQFTKRMEECGEMMGIQLLDHII 81

Query: 83 IGKDAFVSFKGLRI 96
          +G   ++S +    
Sbjct: 82 VGDSGYISLREENF 95


>gi|303229339|ref|ZP_07316129.1| putative DNA repair protein RadC [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302515875|gb|EFL57827.1| putative DNA repair protein RadC [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 232

 Score = 96.7 bits (240), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 51/96 (53%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L   N LI  E  S G +    V  R + ++ +  +A +IIL+HNHPSG+  PSD DI 
Sbjct: 136 MLTSRNKLIHIETISNGGLTSSLVEQRAVFRKAIACNAAAIILIHNHPSGDSRPSDDDIR 195

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+  ++    + I V DHI+IG   F S   +  +
Sbjct: 196 VTKLFVSAGQFMGIPVLDHIVIGDGEFTSLSEIGKL 231


>gi|86609443|ref|YP_478205.1| DNA repair protein RadC [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557985|gb|ABD02942.1| DNA repair protein RadC [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 239

 Score = 96.7 bits (240), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 54/94 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + L++ ++ +RGT      + RE  +  ++  A+ I++ HNHPSG+ +PS  D+
Sbjct: 135 LHLDVKHRLLSQQIVTRGTATETLSHPRETFRSAIKQGASRILVAHNHPSGSLDPSPEDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +T+ ++     L I V DH+I+G   F+S +  
Sbjct: 195 ALTRQLLQAGQLLQIPVLDHLILGGGQFLSLRQR 228


>gi|315296398|gb|EFU55698.1| DNA repair protein RadC domain protein [Escherichia coli MS 16-3]
          Length = 72

 Score = 96.7 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 45/72 (62%)

Query: 26 YIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGK 85
          + RE+++R L  +A +++L HNHPSG   PS AD  +T+ ++  L  ++I V DH+I+G 
Sbjct: 1  HPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALALVDIRVPDHLIVGG 60

Query: 86 DAFVSFKGLRII 97
          +   SF    ++
Sbjct: 61 NQVFSFAEHGLL 72


>gi|325268666|ref|ZP_08135296.1| DNA repair protein RadC [Prevotella multiformis DSM 16608]
 gi|324989194|gb|EGC21147.1| DNA repair protein RadC [Prevotella multiformis DSM 16608]
          Length = 232

 Score = 96.7 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 50/95 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L + ++  LI  +  S G +   PV IR +++  L  + T +   HNHPSG+ NPS  D 
Sbjct: 136 LMMKQNFRLIEAKRISIGGLTMAPVDIRLMMKEALLKNTTILAFCHNHPSGSTNPSREDD 195

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            +T +I    + L+I   DH+I+   ++ S++   
Sbjct: 196 KLTTSIQKACSVLHIHFADHVILADGSYFSYREEG 230


>gi|302345924|ref|YP_003814277.1| DNA repair protein RadC [Prevotella melaninogenica ATCC 25845]
 gi|302149303|gb|ADK95565.1| DNA repair protein RadC [Prevotella melaninogenica ATCC 25845]
          Length = 228

 Score = 96.7 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L + ++  LI  +  S G +   PV +R +++  L  + T +   HNHPSG+ NPS  D 
Sbjct: 132 LMMKQNFRLIEAKRISVGGLTMAPVDLRLMMKEVLLKNTTVLAFCHNHPSGSTNPSRDDD 191

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T +I      L+I   DH+I+    + S++    +
Sbjct: 192 ILTSHIHKACELLHIHFADHVILTDGGYFSYREEGKL 228


>gi|237723203|ref|ZP_04553684.1| DNA repair protein [Bacteroides sp. 2_2_4]
 gi|229447725|gb|EEO53516.1| DNA repair protein [Bacteroides sp. 2_2_4]
          Length = 154

 Score = 96.3 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++ N ++     S G I    V +R I+Q  L  +AT +IL HNHPSG+  PS  D 
Sbjct: 57  VLLNQSNRVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 116

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
            +T+ +      + I + DHII+  +  + S+     +
Sbjct: 117 TLTEKVRKVAELMEIHIADHIILSPEKEYYSYHDEGKL 154


>gi|288803968|ref|ZP_06409390.1| DNA repair protein RadC [Prevotella melaninogenica D18]
 gi|288333538|gb|EFC71991.1| DNA repair protein RadC [Prevotella melaninogenica D18]
          Length = 179

 Score = 96.3 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L + ++  LI  +  S G +   PV IR +++  L  + T +   HNHPSG+ NPS  D 
Sbjct: 83  LMMKQNFRLIEAKRISVGGLTMAPVDIRLMMKEVLLKNTTVLAFCHNHPSGSTNPSRDDD 142

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T +I      L+I   DH+I+    + S++    +
Sbjct: 143 ILTSHIHKACELLHIHFADHVILTDGGYFSYREEGKL 179


>gi|291544071|emb|CBL17180.1| DNA repair protein radc [Ruminococcus sp. 18P13]
          Length = 233

 Score = 96.3 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 49/94 (52%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD    L++  V S G    VPV++R +V+  L+  +  ++L HNHP+G   PS  DI 
Sbjct: 134 CLDDRLRLMSCGVVSEGAPSSVPVHMRRLVEYALQQKSELVVLAHNHPNGTAMPSPEDIA 193

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
            TQ I   L  + I + DHII+  +  VS K   
Sbjct: 194 ATQKIFNVLKSVGIRLVDHIIVAGEQAVSLKEYG 227


>gi|312900402|ref|ZP_07759712.1| DNA repair protein RadC domain protein [Enterococcus faecalis
          TX0470]
 gi|311292492|gb|EFQ71048.1| DNA repair protein RadC domain protein [Enterococcus faecalis
          TX0470]
          Length = 83

 Score = 95.9 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 40/74 (54%)

Query: 23 VPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHII 82
             + REI +  ++ S+  I+L HNHPSGNP PS  DI  T+ +      + I + DHII
Sbjct: 6  SIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDIQFTKRMEECGEMMGIQLLDHII 65

Query: 83 IGKDAFVSFKGLRI 96
          +G   ++S +    
Sbjct: 66 VGDSGYISLREENF 79


>gi|124484938|ref|YP_001029554.1| hypothetical protein Mlab_0110 [Methanocorpusculum labreanum Z]
 gi|124362479|gb|ABN06287.1| DNA repair protein RadC [Methanocorpusculum labreanum Z]
          Length = 247

 Score = 95.9 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L   + ++   + ++G ++   ++ RE+    +   A ++IL+HNHPSGN +PS  D+ +
Sbjct: 154 LSGAHEVLKVRLITKGLVNESQIHPREVFAGAILDRAAAMILIHNHPSGNLHPSKQDLKI 213

Query: 63  TQNIITTLNPLNIIVHDHIIIGK-DAFVSFKGL 94
           T+ +      L I + DH+IIG  D F S    
Sbjct: 214 TKEMQAAGELLGIKLLDHLIIGPTDGFYSIVDE 246


>gi|260437636|ref|ZP_05791452.1| DNA repair protein RadC [Butyrivibrio crossotus DSM 2876]
 gi|292809989|gb|EFF69194.1| DNA repair protein RadC [Butyrivibrio crossotus DSM 2876]
          Length = 717

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)

Query: 8   ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNII 67
             I   + S G +D    + REI++  +  +A +IILVHNHPSG   PS  DI +T  + 
Sbjct: 80  RPININIASIGALDQSIAHPREILKSTILSNAAAIILVHNHPSGRLAPSVEDIGLTDRMN 139

Query: 68  TTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
              + + + + DHII+G  + F SF+    +
Sbjct: 140 KICDLIGVKLVDHIIVGPGNEFYSFQEKNQM 170


>gi|307268851|ref|ZP_07550218.1| DNA repair protein RadC domain protein [Enterococcus faecalis
          TX4248]
 gi|306514855|gb|EFM83403.1| DNA repair protein RadC domain protein [Enterococcus faecalis
          TX4248]
          Length = 81

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 41/74 (55%)

Query: 23 VPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHII 82
             + REI +  ++ S+  I+L HNHPSGNP PS  DI  T+ +      + I + DHII
Sbjct: 4  SIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDIQFTKRMEECGEMMGIQLLDHII 63

Query: 83 IGKDAFVSFKGLRI 96
          +G  A++S +    
Sbjct: 64 VGDSAYISLREENF 77


>gi|227539169|ref|ZP_03969218.1| DNA repair protein [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240851|gb|EEI90866.1| DNA repair protein [Sphingobacterium spiritivorum ATCC 33300]
          Length = 162

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 48/97 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL++ N ++   +   G      V  + +V    +  A ++I+ HNHPSGN  PS +D 
Sbjct: 54  LFLNQANNVLCWRLIGTGNGKSCIVDNKLLVAIACKTLAQNVIVAHNHPSGNLKPSKSDK 113

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +T  I   L   +  + DH+II  + + SF    +I
Sbjct: 114 QLTNGIQEILYMPDTKLLDHLIISHNGYFSFVDNDMI 150


>gi|313892501|ref|ZP_07826090.1| DNA repair protein RadC family protein [Dialister microaerophilus
           UPII 345-E]
 gi|313119080|gb|EFR42283.1| DNA repair protein RadC family protein [Dialister microaerophilus
           UPII 345-E]
          Length = 151

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD    +I     +RG I      I+ I+QR L  +ATSIIL+HNHPSG+  PS  D++ 
Sbjct: 56  LDIKLNVIGIFEVARGDISQCITPIKSILQRALLTNATSIILIHNHPSGDTTPSSHDVHT 115

Query: 63  TQNIITTLNPLNIIVHDHIII-GKDAFVSFKGLRII 97
           T+ I      L+I + DH++I  K+ + S K    I
Sbjct: 116 TRKIDDACRLLDINLQDHLVIYNKNTYTSLKEKGYI 151


>gi|299148786|ref|ZP_07041848.1| DNA repair protein RadC [Bacteroides sp. 3_1_23]
 gi|298513547|gb|EFI37434.1| DNA repair protein RadC [Bacteroides sp. 3_1_23]
          Length = 154

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L++ N ++     S G I    V +R I+Q  L  +AT +IL HNHPSG+  PS  D 
Sbjct: 57  VLLNQSNKVLGIVPISEGGISATYVDVRLILQAALLANATQVILAHNHPSGSMKPSTLDD 116

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
            +T+ +      + I + DH+I+  +  + S+     +
Sbjct: 117 ALTEKVRKVAELMEIHIADHVILSPEKEYYSYYDEGKL 154


>gi|229829061|ref|ZP_04455130.1| hypothetical protein GCWU000342_01146 [Shuttleworthia satelles DSM
           14600]
 gi|229792224|gb|EEP28338.1| hypothetical protein GCWU000342_01146 [Shuttleworthia satelles DSM
           14600]
          Length = 241

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 51/96 (53%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           + +  + L+ + V S G+ D     IR+I    L   A+ ++L+HNHPSG+P PS AD  
Sbjct: 146 YFNVRDELVFESVISLGSSDRTDFPIRKIFSLALTHQASQLVLLHNHPSGDPTPSQADYL 205

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            TQ        L I + DHIIIG   + SF+   +I
Sbjct: 206 ATQEAKMAGQYLEIALRDHIIIGDHQYYSFRQGELI 241


>gi|315288691|gb|EFU48089.1| DNA repair protein RadC domain protein [Escherichia coli MS
          110-3]
 gi|315291428|gb|EFU50788.1| DNA repair protein RadC domain protein [Escherichia coli MS
          153-1]
          Length = 72

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 44/72 (61%)

Query: 26 YIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGK 85
          + RE+++R L  +A +++L HNHPSG   PS AD  +T+ ++  L  ++I V DH+I+G 
Sbjct: 1  HPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGG 60

Query: 86 DAFVSFKGLRII 97
              SF    ++
Sbjct: 61 SQVFSFAEHGLL 72


>gi|42526485|ref|NP_971583.1| DNA repair protein RadC [Treponema denticola ATCC 35405]
 gi|41816678|gb|AAS11464.1| DNA repair protein RadC [Treponema denticola ATCC 35405]
          Length = 225

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +IA  V S GTI+   V+ RE+    L+  A +II  HNHPSGN  PS  D+ +
Sbjct: 127 LNGANEIIATRVVSVGTINRTIVHPREVYSDPLKDRAAAIIAAHNHPSGNLEPSSEDMEL 186

Query: 63  TQNIITTLNPLNIIVHDHII-IGKDAFVSFKGLR 95
           T+ I      L I + DHII +    F SF    
Sbjct: 187 TKRIYEAGKILGIKLLDHIILVPNGNFFSFVQSG 220


>gi|313897956|ref|ZP_07831496.1| DNA repair protein RadC family protein [Clostridium sp. HGF2]
 gi|312957228|gb|EFR38856.1| DNA repair protein RadC family protein [Clostridium sp. HGF2]
          Length = 190

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 6/100 (6%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N  I   V + G++DH  + I+ + +  L  +   +I+ HNHPSG   PS  DI  
Sbjct: 57  LNTKNQPINMSVVAVGSLDHASIDIKSVFKTALLSNTAKMIVFHNHPSGCNTPSLEDIRF 116

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAF------VSFKGLRI 96
           T  + T  N + + + DHII+ KD         SF    +
Sbjct: 117 TDLLYTASNLMGLQLLDHIIVAKDCMSNELKLFSFNEHHL 156


>gi|254409756|ref|ZP_05023537.1| DNA repair protein RadC [Microcoleus chthonoplastes PCC 7420]
 gi|196183753|gb|EDX78736.1| DNA repair protein RadC [Microcoleus chthonoplastes PCC 7420]
          Length = 243

 Score = 95.5 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 47/91 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  N L+  ++ S GT        REI+Q  L   AT  I+ H+HP+G+  PS+ DI
Sbjct: 139 LLLDVKNHLLGIKLISVGTATETLACPREILQAVLRHGATRFIVGHSHPTGSVEPSEKDI 198

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
            +T+ ++     +   + DH+I+G     S 
Sbjct: 199 YLTKQLLQGALLIETPLVDHLILGNGNHRSL 229


>gi|282850526|ref|ZP_06259905.1| putative DNA repair protein RadC [Veillonella parvula ATCC 17745]
 gi|282580019|gb|EFB85423.1| putative DNA repair protein RadC [Veillonella parvula ATCC 17745]
          Length = 232

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 52/96 (54%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L   N LI  E  S G +    V  R + ++ +  +A +IIL+HNHPSG+  PSD DI 
Sbjct: 136 MLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDSRPSDEDIR 195

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+  ++    + I V DHI+IG + F S   +  +
Sbjct: 196 LTKMFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKL 231


>gi|255532045|ref|YP_003092417.1| DNA repair protein RadC [Pedobacter heparinus DSM 2366]
 gi|255345029|gb|ACU04355.1| DNA repair protein RadC [Pedobacter heparinus DSM 2366]
          Length = 152

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 46/97 (47%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L + N ++     S   I       + I    L+ +A+ IIL HNHPSG   P   +I
Sbjct: 56  MLLSRSNRVLGIVDISTDGISKTVADPKVIFGIALKAAASGIILCHNHPSGALEPGSDNI 115

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            + + +      L I + D++II K++F S+    ++
Sbjct: 116 KVAEKLCWGAKILEIEIVDYLIISKNSFYSYSDEGLL 152


>gi|160934210|ref|ZP_02081597.1| hypothetical protein CLOLEP_03081 [Clostridium leptum DSM 753]
 gi|156866883|gb|EDO60255.1| hypothetical protein CLOLEP_03081 [Clostridium leptum DSM 753]
          Length = 251

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 44/92 (47%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD    ++   V + GT +   VY+R IV       AT  IL HNHPSG   PS  D+ 
Sbjct: 129 LLDGKGKVLYCGVVTEGTANSCDVYLRRIVGLAASYDATQAILAHNHPSGFALPSRTDLQ 188

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            T  +   L  +N+ + DH+I+    +VS   
Sbjct: 189 TTVRVKEALALVNVTLIDHMIVADGDYVSMAQ 220


>gi|149278501|ref|ZP_01884638.1| DNA repair protein [Pedobacter sp. BAL39]
 gi|149230871|gb|EDM36253.1| DNA repair protein [Pedobacter sp. BAL39]
          Length = 168

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 53/97 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+   I++     + G I  V V IR I+   +   A+ I+L HNHPS N  PS ADI
Sbjct: 55  ILLNTSGIVLGLLPVASGGIGGVLVDIRIILVAAINSGASGIVLAHNHPSMNLAPSKADI 114

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++T  I      LNI + DH+II  D ++SF   +++
Sbjct: 115 DITNQIKQGAALLNIKLIDHLIISNDGYLSFADQQML 151


>gi|170016727|ref|YP_001727646.1| DNA repair protein [Leuconostoc citreum KM20]
 gi|169803584|gb|ACA82202.1| DNA repair protein [Leuconostoc citreum KM20]
          Length = 203

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 46/93 (49%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            LD    +I  E    G++  V    REI QR L  +A   +++HNHPSGN  PSD DI 
Sbjct: 104 LLDAQLNVIGWETVFIGSLTSVQASPREIFQRVLIANALGFMIIHNHPSGNVMPSDTDIA 163

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
            +Q +    + + + + D  ++  D++ S    
Sbjct: 164 FSQRLKQLGDQMAVPMFDSFVVTYDSYWSLSEN 196


>gi|294792153|ref|ZP_06757301.1| DNA repair protein RadC [Veillonella sp. 6_1_27]
 gi|294457383|gb|EFG25745.1| DNA repair protein RadC [Veillonella sp. 6_1_27]
          Length = 232

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 52/96 (54%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L   N LI  E  S G +    V  R + ++ +  +A +IIL+HNHPSG+  PSD DI 
Sbjct: 136 MLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDSRPSDEDIR 195

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+  ++    + I V DHI+IG + F S   +  +
Sbjct: 196 LTKMFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKL 231


>gi|237742746|ref|ZP_04573227.1| predicted protein [Fusobacterium sp. 4_1_13]
 gi|229430394|gb|EEO40606.1| predicted protein [Fusobacterium sp. 4_1_13]
          Length = 553

 Score = 94.7 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/94 (36%), Positives = 49/94 (52%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           DK+  +I+ E   RG +D   V I+ ++ + L+   T I + HNHPSGN NPS ADI +T
Sbjct: 230 DKNYNVISCESIFRGGLDRSTVDIKTLIPKILDKRVTGISVSHNHPSGNSNPSRADIELT 289

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             I       N  + DH ++ K    SF    +I
Sbjct: 290 NAIEKMCKKFNKNLLDHYVVSKSEVFSFLNKGLI 323


>gi|269798288|ref|YP_003312188.1| DNA repair protein RadC [Veillonella parvula DSM 2008]
 gi|294794018|ref|ZP_06759155.1| DNA repair protein RadC [Veillonella sp. 3_1_44]
 gi|269094917|gb|ACZ24908.1| DNA repair protein RadC [Veillonella parvula DSM 2008]
 gi|294455588|gb|EFG23960.1| DNA repair protein RadC [Veillonella sp. 3_1_44]
          Length = 232

 Score = 94.7 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 52/96 (54%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L   N LI  E  S G +    V  R + ++ +  +A +IIL+HNHPSG+  PSD DI 
Sbjct: 136 MLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDSRPSDEDIR 195

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+  ++    + I V DHI+IG + F S   +  +
Sbjct: 196 LTKMFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKL 231


>gi|238018938|ref|ZP_04599364.1| hypothetical protein VEIDISOL_00798 [Veillonella dispar ATCC 17748]
 gi|237864422|gb|EEP65712.1| hypothetical protein VEIDISOL_00798 [Veillonella dispar ATCC 17748]
          Length = 232

 Score = 94.7 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 52/96 (54%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L   N LI  E  S G +    V  R + ++ +  +A +IIL+HNHPSG+  PSD DI 
Sbjct: 136 MLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDSRPSDEDIR 195

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+  ++    + I V DHI+IG + F S   +  +
Sbjct: 196 LTKLFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKL 231


>gi|15893201|ref|NP_360915.1| putative DNA repair protein (RadC) [Rickettsia conorii str. Malish
           7]
 gi|15620416|gb|AAL03816.1| DNA repair protein (RadC)-like protein [Rickettsia conorii str.
           Malish 7]
          Length = 122

 Score = 94.7 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/78 (58%), Positives = 58/78 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NILIADEV S+GTID   VY REI++R L   A+S+ILVH+HPSG+P PS A+I
Sbjct: 36  LFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASSLILVHHHPSGSPEPSKANI 95

Query: 61  NMTQNIITTLNPLNIIVH 78
           +MT  I+     +NIIV 
Sbjct: 96  HMTNKIVEKCQTINIIVL 113


>gi|169826083|ref|YP_001696241.1| DNA repair protein [Lysinibacillus sphaericus C3-41]
 gi|168990571|gb|ACA38111.1| DNA repair protein [Lysinibacillus sphaericus C3-41]
          Length = 83

 Score = 94.7 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 47/83 (56%)

Query: 15 QSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLN 74
             G ++   V+ RE+++  +  ++ SII+ HNHPS N  PS  DI +T+ +I     + 
Sbjct: 1  MHIGNLNASIVHPREVLKSAILSNSASIIVAHNHPSNNCEPSPEDIEVTKRLIKAAEIIG 60

Query: 75 IIVHDHIIIGKDAFVSFKGLRII 97
          I + DH+I+  D+F S K L  I
Sbjct: 61 ITLMDHLILSTDSFKSLKELGYI 83


>gi|212702189|ref|ZP_03310317.1| hypothetical protein DESPIG_00200 [Desulfovibrio piger ATCC 29098]
 gi|212674394|gb|EEB34877.1| hypothetical protein DESPIG_00200 [Desulfovibrio piger ATCC 29098]
          Length = 136

 Score = 94.3 bits (234), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 45/87 (51%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           +  N L+A E   +G ++ VP+  R++++  L   A+ IILVHNHP G   PS  DI  T
Sbjct: 43  NAGNRLMAWERLRQGNVESVPLLPRDVLEPALRYKASGIILVHNHPGGQTRPSQPDIIFT 102

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVS 90
             +      + +   DH+I+  +   S
Sbjct: 103 NTVRELAVNMGLRFLDHVIVTDNGCYS 129


>gi|313893130|ref|ZP_07826707.1| DNA repair protein RadC [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442483|gb|EFR60898.1| DNA repair protein RadC [Veillonella sp. oral taxon 158 str. F0412]
          Length = 279

 Score = 94.3 bits (234), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 52/96 (54%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            L   N LI  E  S G +    V  R + ++ +  +A +IIL+HNHPSG+  PSD DI 
Sbjct: 183 MLTSRNKLIQLEHISNGGLVSSLVEQRAVFKKAIACNAAAIILIHNHPSGDSRPSDEDIR 242

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+  ++    + I V DHI+IG + F S   +  +
Sbjct: 243 LTKLFVSAGQFMGIPVLDHIVIGDNEFTSLSEIGKL 278


>gi|325473429|gb|EGC76624.1| DNA repair protein RadC [Treponema denticola F0402]
          Length = 225

 Score = 94.3 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N +IA  V S GTI+   V+ RE+    L+  A +II  HNHPSGN  PS  D+ +
Sbjct: 127 LNGANEIIATRVVSVGTINRTIVHPREVYSDPLKDRAAAIIAAHNHPSGNLEPSSEDMEL 186

Query: 63  TQNIITTLNPLNIIVHDHII-IGKDAFVSFKGLR 95
           T+ I      L + + DHII +    F SF    
Sbjct: 187 TRRIYEAGKILGVKLLDHIILVPNGNFFSFVQSG 220


>gi|167771605|ref|ZP_02443658.1| hypothetical protein ANACOL_02977 [Anaerotruncus colihominis DSM
           17241]
 gi|167666245|gb|EDS10375.1| hypothetical protein ANACOL_02977 [Anaerotruncus colihominis DSM
           17241]
          Length = 230

 Score = 94.3 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L L+    L   +  + GTID  P+Y R I++  +   A S+IL HNHP G   PS+AD+
Sbjct: 128 LCLNNKGGLTYGDFIAEGTIDSAPMYSRTILEAAMRSRAVSVILAHNHPHGLAVPSNADL 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+++   L    I + DH I     ++S +    I
Sbjct: 188 AATESVCHALAAAKIRLLDHFIFAGQDYISLRDSGFI 224


>gi|229135279|ref|ZP_04264075.1| DNA repair protein radC [Bacillus cereus BDRD-ST196]
 gi|228648204|gb|EEL04243.1| DNA repair protein radC [Bacillus cereus BDRD-ST196]
          Length = 73

 Score = 94.0 bits (233), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/73 (42%), Positives = 43/73 (58%)

Query: 25 VYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIG 84
          ++ RE+ +     +A SII +HNHPSG+P PS  DI +T+ ++     + I V DHIIIG
Sbjct: 1  MHPREVFKEAFRRAAASIICLHNHPSGDPAPSREDIEVTKRLVECGRIIGIEVLDHIIIG 60

Query: 85 KDAFVSFKGLRII 97
             FVS K    I
Sbjct: 61 DHKFVSLKEKGHI 73


>gi|229827154|ref|ZP_04453223.1| hypothetical protein GCWU000182_02539 [Abiotrophia defectiva ATCC
           49176]
 gi|229788772|gb|EEP24886.1| hypothetical protein GCWU000182_02539 [Abiotrophia defectiva ATCC
           49176]
          Length = 314

 Score = 94.0 bits (233), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 1/93 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L  +   I   + S GT+D      REI++  +  +A +++L HNHPSGN NPS  D  +
Sbjct: 66  LRTNGQPINMNIVSIGTLDSSLTNPREILKSMVLSNAFAVMLFHNHPSGNLNPSREDFII 125

Query: 63  TQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGL 94
           T  +    N + I + DHIIIG  D F SF   
Sbjct: 126 TNKMNDICNLIGIKLWDHIIIGPGDEFYSFHAE 158


>gi|157829113|ref|YP_001495355.1| hypothetical protein A1G_07030 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933837|ref|YP_001650626.1| DNA repair protein [Rickettsia rickettsii str. Iowa]
 gi|157801594|gb|ABV76847.1| hypothetical protein A1G_07030 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908924|gb|ABY73220.1| DNA repair protein [Rickettsia rickettsii str. Iowa]
          Length = 122

 Score = 93.6 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 46/78 (58%), Positives = 58/78 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NILIADEV S+GTID   VY REI++R L   A+S+ILVH+HPSG+P PS  +I
Sbjct: 36  LFLNKKNILIADEVLSQGTIDQATVYPREIIKRALFNEASSLILVHHHPSGSPEPSKTNI 95

Query: 61  NMTQNIITTLNPLNIIVH 78
           +MT  I+ T   +NIIV 
Sbjct: 96  HMTNKIVETCQTVNIIVL 113


>gi|75759952|ref|ZP_00740021.1| DNA repair protein radC [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74492549|gb|EAO55696.1| DNA repair protein radC [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 205

 Score = 93.2 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 41/72 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+  N ++  +    G+++   V+ RE+ +     +A SII +HNHPSG+P PS  DI
Sbjct: 129 LYLNTKNQVLHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDI 188

Query: 61  NMTQNIITTLNP 72
            +T+ ++     
Sbjct: 189 EVTKRLVECGQI 200


>gi|317132479|ref|YP_004091793.1| DNA repair protein RadC [Ethanoligenens harbinense YUAN-3]
 gi|315470458|gb|ADU27062.1| DNA repair protein RadC [Ethanoligenens harbinense YUAN-3]
          Length = 242

 Score = 92.8 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 49/92 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + +D    ++       G+++   V +R IV+  +  +AT +IL HNHP G   PS+ D+
Sbjct: 133 MCIDGKGKVLFCGQVFEGSVNAASVSVRRIVEIVVRYAATDVILAHNHPGGLAIPSEEDV 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           ++T  +   L  ++I + DH+II    +VS  
Sbjct: 193 HVTAQVADALRTVDIRLLDHLIIAGKDWVSLA 224


>gi|309389493|gb|ADO77373.1| DNA replication and repair protein RadC [Halanaerobium praevalens
           DSM 2228]
          Length = 231

 Score = 92.0 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 59/96 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD  N +I+    SRG +    V+ RE+ +  +  S+ +IILVHNHPSG+P PS  D+
Sbjct: 135 ILLDVKNKVISVPEISRGGLSSSIVHPREVFKEAIRRSSAAIILVHNHPSGDPTPSADDL 194

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++T+ ++ T   + I + DHIII  D ++SFK   +
Sbjct: 195 SITKKLVKTGKIIGIEIIDHIIIAGDKYLSFKEKGL 230


>gi|34581128|ref|ZP_00142608.1| hypothetical DNA repair protein (RadC) [Rickettsia sibirica 246]
 gi|28262513|gb|EAA26017.1| hypothetical DNA repair protein (RadC) [Rickettsia sibirica 246]
          Length = 122

 Score = 91.7 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/78 (58%), Positives = 58/78 (74%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFL+K NILIADEV S+ TID   VY REI++R L   A+S+ILVH+HPSG+P PS A+I
Sbjct: 36  LFLNKKNILIADEVLSQETIDQAAVYPREIIKRALFNEASSLILVHHHPSGSPEPSKANI 95

Query: 61  NMTQNIITTLNPLNIIVH 78
           +MT  I+ T   +NIIV 
Sbjct: 96  HMTNKIVETCQTVNIIVL 113


>gi|313113935|ref|ZP_07799492.1| DNA repair protein RadC [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310623730|gb|EFQ07128.1| DNA repair protein RadC [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 247

 Score = 91.7 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 46/95 (48%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD    + A      GT D V + I+++V   ++    +++L HNHP+G   PS  D+  
Sbjct: 140 LDSRKRVRAAVWLREGTTDRVSLDIKDVVSAAIKGGTDTVVLSHNHPNGAALPSMEDLEA 199

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T NI   L  +NI + DH I+    + S +    +
Sbjct: 200 TGNIARALGLVNIHLLDHFILTDTEYFSMRDANRL 234


>gi|169823539|ref|YP_001691042.1| DNA repair protein [Finegoldia magna ATCC 29328]
 gi|167832159|dbj|BAG09074.1| DNA repair protein [Finegoldia magna ATCC 29328]
          Length = 102

 Score = 91.3 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 4/95 (4%)

Query: 2  FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
            D    LI  ++ S GTI+    + RE+ ++ +   A  +++ HNHPSG+  PS  DI 
Sbjct: 1  MFDSKLKLIGIDLISVGTINQSLAHPREVFRKAVISGAAFVMIAHNHPSGDTTPSAEDIK 60

Query: 62 MTQNIITTLNPLNIIVHDHIIIG----KDAFVSFK 92
          + +N+      LNI + D  I+     +++ +S +
Sbjct: 61 VYRNLSECSEILNIKLLDSFIVSLKPEQESVLSMR 95


>gi|262193472|ref|YP_003264681.1| DNA repair protein RadC [Haliangium ochraceum DSM 14365]
 gi|262076819|gb|ACY12788.1| DNA repair protein RadC [Haliangium ochraceum DSM 14365]
          Length = 226

 Score = 91.3 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 50/88 (56%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N++I +   +RG +  V V+ RE+ +  +   A + ++ HNHPSG+P PS  DI +
Sbjct: 131 LDPRNVIIEEIEVARGCLTGVDVHPREVFRPLIRRGAAAAVVAHNHPSGDPAPSAEDIAL 190

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVS 90
           T+ +    + L I + DH+++G     S
Sbjct: 191 TRRLCEAGDLLGIPLLDHLVLGACNCAS 218


>gi|218458578|ref|ZP_03498669.1| DNA repair protein RadC [Rhizobium etli Kim 5]
          Length = 261

 Score = 91.3 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 49/63 (77%), Positives = 56/63 (88%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLDK N+LIADEVQ RGT+DH PVY RE+V+R LELSAT+IILVHNHPSG+P PS ADI
Sbjct: 199 LFLDKRNVLIADEVQGRGTVDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADI 258

Query: 61  NMT 63
           +MT
Sbjct: 259 DMT 261


>gi|126463593|ref|YP_001044707.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17029]
 gi|126105257|gb|ABN77935.1| DNA repair protein RadC [Rhodobacter sphaeroides ATCC 17029]
          Length = 223

 Score = 90.5 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/66 (66%), Positives = 57/66 (86%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD+ N+LIADE Q+RGT+DHVPVY RE+V+R LEL+A+++ILVHNHPSG+P PSD D+
Sbjct: 158 LYLDRKNVLIADEEQARGTVDHVPVYPREVVKRALELNASALILVHNHPSGDPTPSDQDV 217

Query: 61  NMTQNI 66
            MT  I
Sbjct: 218 AMTAQI 223


>gi|237743672|ref|ZP_04574153.1| predicted protein [Fusobacterium sp. 7_1]
 gi|229432703|gb|EEO42915.1| predicted protein [Fusobacterium sp. 7_1]
          Length = 533

 Score = 90.5 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 44/89 (49%)

Query: 9   LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68
           +I  E  ++G +D   V ++ ++ + L+     I + HNHPSGN NPS ADI +T  I  
Sbjct: 235 VINCESIAKGGLDKATVDLKILIPKILDKRVAGISVSHNHPSGNSNPSRADIELTNAIEK 294

Query: 69  TLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
                N  + DH ++      SF    +I
Sbjct: 295 MCKKFNKNLLDHYVVSSSKVFSFLNEGLI 323


>gi|146329081|ref|YP_001209721.1| response regulator receiver domain-containing protein
           [Dichelobacter nodosus VCS1703A]
 gi|146232551|gb|ABQ13529.1| response regulator receiver domain protein-DNA repair protein RadC
           [Dichelobacter nodosus VCS1703A]
          Length = 401

 Score = 90.1 bits (223), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 3/98 (3%)

Query: 1   LFLDKHNILIADEVQ--SRGT-IDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSD 57
           L L++ N  +A E    + G+ +  V V  R++V+  L+  A +++LVHNHP+ +   S+
Sbjct: 302 LLLNQKNQYLAYERIGQAFGSEVSQVNVSCRKLVKSVLDSDAAAVVLVHNHPAQSTELSE 361

Query: 58  ADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           +D+  T+ I   L PL + + DH ++  +  +S +   
Sbjct: 362 SDLQTTKFIENFLKPLGVRLLDHFVVAGNQVISLRETG 399


>gi|293402942|ref|ZP_06647039.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|291429857|gb|EFF02871.1| conserved hypothetical protein [Escherichia coli FVEC1412]
          Length = 68

 Score = 90.1 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 41/68 (60%)

Query: 30 IVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFV 89
          +++R L  +A +++L HNHPSG   PS AD  +T+ ++  L  ++I V DH+I+G     
Sbjct: 1  MIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGSQVF 60

Query: 90 SFKGLRII 97
          SF    ++
Sbjct: 61 SFAEYGLL 68


>gi|183014127|dbj|BAG24384.1| hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus]
          Length = 139

 Score = 90.1 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 51/89 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + ++  N     +  S G+I+   ++ REI +  +  +A SI++ HNHPSG+  PS  DI
Sbjct: 49  ICMNSKNEPTHIQSLSIGSINQTMIHPREIFKTAILSNANSIMIGHNHPSGDVTPSPEDI 108

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFV 89
           N+T+ ++     + I+ +DHII    +++
Sbjct: 109 NVTERLMLISEMMGILFYDHIIFSDSSYL 137


>gi|85374857|ref|YP_458919.1| DNA repair protein RadC [Erythrobacter litoralis HTCC2594]
 gi|84787940|gb|ABC64122.1| DNA repair protein RadC [Erythrobacter litoralis HTCC2594]
          Length = 149

 Score = 89.7 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 46/97 (47%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++ D     + DE  + G  + + +  R +V R L + A  +IL HNH SGN  PS+ DI
Sbjct: 52  VYCDDRQRYLHDETLTIGGENSLVLRARPLVHRALTIGAGGLILAHNHLSGNCQPSEKDI 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  +      L + + DH+I  +D F S      +
Sbjct: 112 VATHRLQKLGAELELTLIDHMIFTRDRFFSMAAGGFL 148


>gi|160943191|ref|ZP_02090427.1| hypothetical protein FAEPRAM212_00677 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445430|gb|EDP22433.1| hypothetical protein FAEPRAM212_00677 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105228|emb|CBL02772.1| DNA repair proteins [Faecalibacterium prausnitzii SL3/3]
          Length = 239

 Score = 89.3 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 46/95 (48%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD    + A      GT D V + I+ +V   ++    +++L HNHP+G   PS  D++ 
Sbjct: 132 LDSRKRVRAAVWLREGTSDRVSLDIKNVVAAAIKGGTDAVVLCHNHPNGVALPSLEDMDA 191

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T +I   L  +N+ + DH I+    + S +    +
Sbjct: 192 TGSIARALGLVNVHLLDHFILTDTEYFSMRDANRL 226


>gi|226326898|ref|ZP_03802416.1| hypothetical protein PROPEN_00758 [Proteus penneri ATCC 35198]
 gi|225204735|gb|EEG87089.1| hypothetical protein PROPEN_00758 [Proteus penneri ATCC 35198]
          Length = 198

 Score = 89.0 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/65 (53%), Positives = 45/65 (69%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  N LIA E   +GTI+ V V+ REIV++ ++ +ATSIIL HNHPSG   PS AD 
Sbjct: 127 LFLDNQNQLIAFEEMFKGTINRVEVHPREIVRQSIKKNATSIILAHNHPSGVCEPSLADK 186

Query: 61  NMTQN 65
            +T+ 
Sbjct: 187 EITEK 191


>gi|225019208|ref|ZP_03708400.1| hypothetical protein CLOSTMETH_03161 [Clostridium methylpentosum
           DSM 5476]
 gi|224948060|gb|EEG29269.1| hypothetical protein CLOSTMETH_03161 [Clostridium methylpentosum
           DSM 5476]
          Length = 226

 Score = 89.0 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
             D  + LIA ++ ++GT D V   ++EIVQ     +A ++ + HNHP G  NPS +D+ 
Sbjct: 130 CFDNASKLIACQMLAKGTADTVLFPVKEIVQFACNRNAANVAIAHNHPMGLCNPSSSDVT 189

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDA-FVSFKGLRII 97
            + ++  TL  + I + DHII+GK+   +S     ++
Sbjct: 190 NSTDLKETLRKIQIRLVDHIIVGKNGDALSLVEYGVL 226


>gi|322366576|gb|ADW95362.1| hypothetical protein [Staphylococcus cohnii]
          Length = 162

 Score = 89.0 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 50/90 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + ++  N     +  S G+I+   ++ REI +  +  +A SI++ HNHPSG+  PS  DI
Sbjct: 63  ICMNSKNEPTHIQTLSIGSINQSIIHPREIFKTAILSNANSIMIGHNHPSGDVTPSPEDI 122

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
           N+T+ ++     + I+ +DHI+  +    S
Sbjct: 123 NITERLMLISEMMGILFYDHIVFSESHTHS 152


>gi|312880415|ref|ZP_07740215.1| DNA repair protein RadC [Aminomonas paucivorans DSM 12260]
 gi|310783706|gb|EFQ24104.1| DNA repair protein RadC [Aminomonas paucivorans DSM 12260]
          Length = 222

 Score = 88.2 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/89 (32%), Positives = 47/89 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD     + ++V S G +D   V +R + +R + L A  ++L HNHP G+P  S+ D 
Sbjct: 125 LFLDPKERCLDEQVVSYGGLDGAFVDLRFLWRRAVRLDAARVVLWHNHPCGDPRLSEEDR 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFV 89
            +T++    L  L I +  H ++   AF 
Sbjct: 185 ALTKHCRECLRFLGIELAGHYVLAGGAFW 213


>gi|85709335|ref|ZP_01040400.1| putative DNA repair protein [Erythrobacter sp. NAP1]
 gi|85688045|gb|EAQ28049.1| putative DNA repair protein [Erythrobacter sp. NAP1]
          Length = 140

 Score = 88.2 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 45/97 (46%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LF+D     + D     G    + + IRE+ Q  L + A  IIL HNHPSG   PS  D+
Sbjct: 44  LFVDNTRSYLGDTPIGSGAAGSLSMRIRELFQAALSVDAHGIILAHNHPSGLCRPSAYDV 103

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T+ +      L+I + DH+I    A  S +    +
Sbjct: 104 EATRKLKAIAQTLDIELLDHLIFTTSAVYSMRAGGQL 140


>gi|291530928|emb|CBK96513.1| DNA repair proteins [Eubacterium siraeum 70/3]
          Length = 228

 Score = 88.2 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD     ++ E+ S G ++ V   I  ++++ ++     +++ HNHP G+  PS  D 
Sbjct: 125 IFLDSEYCFMSQEIISTGALEQVRPDIMRLLEKAVQKRCPIVVMTHNHPRGSEMPSTEDK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+N+   L    I + DH+I+G    +S +   I+
Sbjct: 185 IMTRNLFNLLEKAGIYLADHVIVGMHGSLSMRENGIL 221


>gi|291557560|emb|CBL34677.1| DNA repair proteins [Eubacterium siraeum V10Sc8a]
          Length = 228

 Score = 88.2 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD     ++ E+ S G ++ V   I  ++++ ++     +++ HNHP G+  PS  D 
Sbjct: 125 IFLDSEYCFMSQEIISTGALEQVRPDIMRLLEKAVQKRCPIVVMTHNHPRGSEMPSTEDK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+N+   L    I + DH+I+G    +S +   I+
Sbjct: 185 IMTRNLFNLLEKAGIYLADHVIVGMHGSLSMRENGIL 221


>gi|167750401|ref|ZP_02422528.1| hypothetical protein EUBSIR_01375 [Eubacterium siraeum DSM 15702]
 gi|167656552|gb|EDS00682.1| hypothetical protein EUBSIR_01375 [Eubacterium siraeum DSM 15702]
          Length = 228

 Score = 88.2 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 51/97 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FLD     ++ E+ S G ++ V   I  ++++ ++     +++ HNHP G+  PS  D 
Sbjct: 125 IFLDSEYCFMSQEIISTGALEQVRPDIMRLLEKAVQKRCPIVVMTHNHPRGSEMPSTEDK 184

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            MT+N+   L    I + DH+I+G    +S +   I+
Sbjct: 185 IMTRNLFNLLEKAGIYLADHVIVGMHGSLSMRENGIL 221


>gi|218135236|ref|ZP_03464040.1| hypothetical protein BACPEC_03141 [Bacteroides pectinophilus ATCC
          43243]
 gi|217990621|gb|EEC56632.1| hypothetical protein BACPEC_03141 [Bacteroides pectinophilus ATCC
          43243]
          Length = 104

 Score = 88.2 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 24 PVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIII 83
            + RE+ +  +  +A S++L+H HPSGN  PS AD  MT  +      + I + DHII+
Sbjct: 1  MAHPRELFKSSILSNAASMMLIHCHPSGNVFPSKADTMMTDRMNKLCELMGIPLIDHIIV 60

Query: 84 GKD--AFVSFKGLRII 97
          G D   F SF+   +I
Sbjct: 61 GGDNREFFSFREKGMI 76


>gi|158320354|ref|YP_001512861.1| DNA repair protein RadC [Alkaliphilus oremlandii OhILAs]
 gi|158140553|gb|ABW18865.1| DNA repair protein RadC [Alkaliphilus oremlandii OhILAs]
          Length = 156

 Score = 87.8 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 1/95 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L +D  N  I   + + G   +V V   EI +  L  +ATSII+ HNHPSG   PS  DI
Sbjct: 51  LCIDSSNYAINVAILNIGNNKNVEVVPSEIFKIALLSNATSIIICHNHPSGLLEPSQYDI 110

Query: 61  NMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGL 94
            +T+ I      L I + D +I+G    + S +  
Sbjct: 111 EVTKKIGRIGYLLGIKLIDSMIMGYNGEYFSMRNE 145


>gi|295101804|emb|CBK99349.1| DNA repair protein radc [Faecalibacterium prausnitzii L2-6]
          Length = 244

 Score = 87.8 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 49/95 (51%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  + + +      G    V + ++++V   L     S++L HNHP+G P PS  D+  
Sbjct: 133 LDSRSRVKSVYWLKEGNSRMVSLEVKDVVSAALRGGTESVVLCHNHPNGVPLPSREDLAA 192

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+NI+  L  + I + DHII+ ++ + S +    +
Sbjct: 193 TENIVRALGLVKIRLRDHIILAENDYFSMRESNRL 227


>gi|291542539|emb|CBL15649.1| DNA repair proteins [Ruminococcus bromii L2-63]
          Length = 235

 Score = 87.4 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 1   LFL-DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           L L D    +I  ++ S+G+++   + +R+IV   L  +A +  + HNHPSG   PS +D
Sbjct: 130 LMLGDAKGKMIYFDIISKGSLNSSDMPVRKIVDLSLRHNAKTAFIAHNHPSGTALPSGSD 189

Query: 60  INMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           ++ T  + +TL  + + + DH II  D +VS +  R+
Sbjct: 190 LDTTIVLKSTLATVGVELIDHFIITDDDYVSLRESRL 226


>gi|296392681|ref|YP_003657565.1| DNA repair protein RadC [Segniliparus rotundus DSM 44985]
 gi|296179828|gb|ADG96734.1| DNA repair protein RadC [Segniliparus rotundus DSM 44985]
          Length = 216

 Score = 87.4 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 41/87 (47%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D    L   E+ + G+    PV +REI+   L     +  L HNHPSG+P PS AD  +T
Sbjct: 127 DARLRLRRTEIVAMGSATACPVPVREILATVLRHDGVAFALAHNHPSGDPTPSAADRALT 186

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVS 90
             +        +   DHI++  + + S
Sbjct: 187 DMLHNAAWATGLRFLDHIVVAGERWRS 213


>gi|257451830|ref|ZP_05617129.1| DNA repair protein radC-like protein [Fusobacterium sp. 3_1_5R]
          Length = 366

 Score = 86.6 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 2/94 (2%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D    + + E    G ++   V I+ ++   L   +  I L+HNHPSGN +PS  D+ +T
Sbjct: 241 DDKYRITSMETVFVGGLNRSIVDIKTLIPYFLN-ESKGICLLHNHPSGNNSPSRQDLELT 299

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++I    N     ++DH I+G     SF+   +I
Sbjct: 300 RDISEIANQFKKQMYDHFIVG-SKVFSFREESLI 332


>gi|240146799|ref|ZP_04745400.1| DNA repair protein RadC [Roseburia intestinalis L1-82]
 gi|257201037|gb|EEU99321.1| DNA repair protein RadC [Roseburia intestinalis L1-82]
          Length = 102

 Score = 86.3 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 26 YIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGK 85
          + RE+ +  +  +A S++L+H HPSGN  PS AD  MT  +      + I + DHII+G 
Sbjct: 1  HPRELFKSSILSNAASMMLIHCHPSGNIFPSKADTMMTDRMNKLCELIGIPLLDHIIVGG 60

Query: 86 DA--FVSFKGLRII 97
          D   F SFK   +I
Sbjct: 61 DNRAFFSFKEKGMI 74


>gi|317058385|ref|ZP_07922870.1| DNA repair protein [Fusobacterium sp. 3_1_5R]
 gi|313684061|gb|EFS20896.1| DNA repair protein [Fusobacterium sp. 3_1_5R]
          Length = 325

 Score = 86.3 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 2/94 (2%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D    + + E    G ++   V I+ ++   L   +  I L+HNHPSGN +PS  D+ +T
Sbjct: 200 DDKYRITSMETVFVGGLNRSIVDIKTLIPYFLN-ESKGICLLHNHPSGNNSPSRQDLELT 258

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++I    N     ++DH I+G     SF+   +I
Sbjct: 259 RDISEIANQFKKQMYDHFIVG-SKVFSFREESLI 291


>gi|162454769|ref|YP_001617136.1| DNA repair protein [Sorangium cellulosum 'So ce 56']
 gi|161165351|emb|CAN96656.1| DNA repair protein [Sorangium cellulosum 'So ce 56']
          Length = 259

 Score = 86.3 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 1/96 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +      ++G +    V  R+I++  L  +A++++LVHNHPSG+  PS  D+ M
Sbjct: 149 LDGRNGMRGARRVAQGGLHGCSVTARDILRAALSDAASALVLVHNHPSGDSAPSPEDVAM 208

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFV-SFKGLRII 97
           T  +      + + + DH+I+  D    S   L +I
Sbjct: 209 TNAVAAAGEVIGVPLVDHVILAPDGHYSSLLDLGMI 244


>gi|48243599|gb|AAT40757.1| putative DNA repair protein [Haemophilus influenzae]
          Length = 78

 Score = 85.9 bits (212), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/78 (37%), Positives = 47/78 (60%)

Query: 20 IDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHD 79
          +  + V IREI+++ L+L+A++II+ HNHP+GN  PSDAD  +T+ +      + I + D
Sbjct: 1  VSEISVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADKYVTKRLKEACELMEIKLLD 60

Query: 80 HIIIGKDAFVSFKGLRII 97
          H I+   A   F    +I
Sbjct: 61 HFIVSGSASFCFTDNHLI 78


>gi|257438385|ref|ZP_05614140.1| putative DNA repair protein RadC [Faecalibacterium prausnitzii
           A2-165]
 gi|257199216|gb|EEU97500.1| putative DNA repair protein RadC [Faecalibacterium prausnitzii
           A2-165]
          Length = 241

 Score = 85.9 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 49/95 (51%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  + +        GT D V + I+++V   L+    S++L HNHP+G   PS  D+  
Sbjct: 133 LDGRSRIKGLFWLRDGTSDRVSLEIKDVVAAALKGGTDSVVLCHNHPNGVALPSREDLMA 192

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+NI+  L  + + + DHII+ +  + S +    +
Sbjct: 193 TENIVRALGLVKVHLRDHIILTESEYFSMREANRL 227


>gi|210611806|ref|ZP_03289040.1| hypothetical protein CLONEX_01239 [Clostridium nexile DSM 1787]
 gi|210151856|gb|EEA82863.1| hypothetical protein CLONEX_01239 [Clostridium nexile DSM 1787]
          Length = 184

 Score = 85.9 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L +   +I   + S G++D   V+   IV+  +   A+S+IL+HNHPSGNP  S AD ++
Sbjct: 74  LARSGEVINASICSVGSVDCAYVFAGGIVRTAVMSGASSVILIHNHPSGNPRASKADWDV 133

Query: 63  TQNIITTLNPLNIIVHDHIIIG-KDAFVSFKG 93
           T+ +       N+ + DHIIIG  +  +S K 
Sbjct: 134 TKRLAIACKIFNLELLDHIIIGANNQKISLKE 165


>gi|261367039|ref|ZP_05979922.1| DNA repair protein RadC [Subdoligranulum variabile DSM 15176]
 gi|282571158|gb|EFB76693.1| DNA repair protein RadC [Subdoligranulum variabile DSM 15176]
          Length = 244

 Score = 85.9 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 50/97 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + LD     + D   + G  + V +  R++++      AT  IL HNHP+G P PS+AD+
Sbjct: 133 ILLDDKCCPVRDLRIAEGVPNRVHIDTRKLLRDVARTDATCGILAHNHPTGLPLPSEADV 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  I+  L+PL + V DHII+  +   S +    +
Sbjct: 193 IATVGIMKALDPLGVSVIDHIIVAGEDSCSMRARGCL 229


>gi|319937990|ref|ZP_08012390.1| hypothetical protein HMPREF9488_03226 [Coprobacillus sp. 29_1]
 gi|319806896|gb|EFW03535.1| hypothetical protein HMPREF9488_03226 [Coprobacillus sp. 29_1]
          Length = 146

 Score = 85.5 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 43/95 (45%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD  N +I       G  D   V  R++ +  +  +A   I VHNH +G+  PS  D  +
Sbjct: 52  LDTRNRIIEVFEVFGGESDIKIVTPRKMFKSLVLCNAYRFICVHNHLNGDTCPSAEDKQL 111

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            + +      L I + D  I+G +  +SF+   ++
Sbjct: 112 AKELQKYGEMLQIELLDFCIVGDNNILSFQNKSLL 146


>gi|154499911|ref|ZP_02037949.1| hypothetical protein BACCAP_03568 [Bacteroides capillosus ATCC
           29799]
 gi|150271509|gb|EDM98766.1| hypothetical protein BACCAP_03568 [Bacteroides capillosus ATCC
           29799]
          Length = 233

 Score = 85.5 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 43/97 (44%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L +D     +       G ++   +  R IV+  L  +A+ +IL HNH SG   PSD D 
Sbjct: 133 LCMDGKGKYLGCPKVGEGNVNAAEINARVIVEAALNHNASRVILAHNHVSGLALPSDEDK 192

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
             T  +   L  + +I+ DH+I   D  VS      +
Sbjct: 193 QTTLYLRELLRQVGVILVDHLIFVDDDMVSMGDSGFL 229


>gi|317507551|ref|ZP_07965270.1| DNA repair protein RadC [Segniliparus rugosus ATCC BAA-974]
 gi|316254152|gb|EFV13503.1| DNA repair protein RadC [Segniliparus rugosus ATCC BAA-974]
          Length = 216

 Score = 85.1 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 41/87 (47%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D    L   E+ +RG+    P+ +REI+   L     S  + HNHP G+P PS AD  +T
Sbjct: 127 DGKLRLRRTEIVARGSAKSCPMPVREILATVLRHDGVSFAVAHNHPGGDPTPSAADRALT 186

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVS 90
             +        +   DHI++  + + S
Sbjct: 187 DTLHNAAWTTGLRFLDHIVVAGEQWRS 213


>gi|294101601|ref|YP_003553459.1| DNA repair protein RadC [Aminobacterium colombiense DSM 12261]
 gi|293616581|gb|ADE56735.1| DNA repair protein RadC [Aminobacterium colombiense DSM 12261]
          Length = 224

 Score = 85.1 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 50/89 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD    +I+ E  S G I+   + ++ + ++ + L A  ++L+HNHP+G   PS  DI
Sbjct: 128 LFLDGKGGVISKERVSYGGIEGAFLDVKYLFRKAVRLDARGMVLIHNHPNGTLRPSREDI 187

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFV 89
            +T+ +  +L+ L+I    H I  +  +V
Sbjct: 188 MLTEFVERSLSVLDISFVGHFIAARGEWV 216


>gi|254304164|ref|ZP_04971522.1| possible primase/helicase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148324356|gb|EDK89606.1| possible primase/helicase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 922

 Score = 84.7 bits (209), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 45/94 (47%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D    +      S+G  D+  V  + I    L+     IIL HNHPSG  NPS AD ++T
Sbjct: 714 DGGYNISEVVTISQGGADYAKVDPKHIYPHLLDEKLKGIILCHNHPSGVANPSRADNDLT 773

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +N+       N  V DHII+GK+    +    +I
Sbjct: 774 ENLTKRAAFFNKEVLDHIIVGKEGVYKYSENDLI 807


>gi|296269060|ref|YP_003651692.1| DNA repair protein RadC [Thermobispora bispora DSM 43833]
 gi|296091847|gb|ADG87799.1| DNA repair protein RadC [Thermobispora bispora DSM 43833]
          Length = 224

 Score = 84.7 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D    ++   V S G  DH    +R+I+   L     +  L HNHP G+  PS AD+ +T
Sbjct: 129 DTRGTVLRRAVVSEGGSDHTSAPVRDIITTVLVSGGAAFGLAHNHPGGSLEPSPADVEVT 188

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAF 88
             +      + +   DH+I+   A+
Sbjct: 189 VRLRAAAETVGLRFLDHLIVTDTAW 213


>gi|319937866|ref|ZP_08012266.1| hypothetical protein HMPREF9488_03102 [Coprobacillus sp. 29_1]
 gi|319806772|gb|EFW03411.1| hypothetical protein HMPREF9488_03102 [Coprobacillus sp. 29_1]
          Length = 124

 Score = 84.7 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 48/94 (51%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD    +      SRG+I+      R++ +R L  +A++ ++ HNHPS NP PS  DIN 
Sbjct: 30  LDTQLNMTGFFEVSRGSIEESLCVPRDVFKRLLLANASAFVIAHNHPSENPEPSLEDINN 89

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            + +      + I + D++I   D  +SFK   I
Sbjct: 90  ARALREASEIMGIKMVDYLIAAGDNIISFKKENI 123


>gi|324015349|gb|EGB84568.1| DNA repair protein [Escherichia coli MS 60-1]
          Length = 63

 Score = 84.3 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 37/63 (58%)

Query: 35 LELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
          +  +A +++L HNHPSG   PS AD  +T+ ++  L  ++I V DH+I+G     SF   
Sbjct: 1  MYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALALVDIRVPDHLIVGGSQVFSFAEH 60

Query: 95 RII 97
           ++
Sbjct: 61 GLL 63


>gi|220931910|ref|YP_002508818.1| DNA repair protein RadC [Halothermothrix orenii H 168]
 gi|219993220|gb|ACL69823.1| DNA repair protein RadC [Halothermothrix orenii H 168]
          Length = 240

 Score = 83.9 bits (207), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 1/96 (1%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRC-LELSATSIILVHNHPSGNPNPSDADIN 61
           LD+ N LI  E    GT   + +  + I     L    TS+I+  N       PS  D+ 
Sbjct: 145 LDEDNYLITWEFLGEGTNKPIKLDPKTIFHTSFLLEEKTSVIIAENMNDNFTRPSQKDVL 204

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ ++     L I   DHI+I  D + S+  L +I
Sbjct: 205 VTKRLVKAGKILGIDFLDHIVIEADGYHSYDQLNLI 240


>gi|227537790|ref|ZP_03967839.1| possible DNA repair protein RadC [Sphingobacterium spiritivorum
          ATCC 33300]
 gi|227242404|gb|EEI92419.1| possible DNA repair protein RadC [Sphingobacterium spiritivorum
          ATCC 33300]
          Length = 74

 Score = 83.6 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 41/72 (56%)

Query: 24 PVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIII 83
           V +R I+   L  +AT I++ HNHPSG   PS AD  +T  II     L+I + DHI++
Sbjct: 1  MVDMRLIMSLALLCNATRIVVAHNHPSGTMTPSLADHALTNKIIEAGKVLDIQLLDHIVL 60

Query: 84 GKDAFVSFKGLR 95
            +++ SFK   
Sbjct: 61 TSNSYYSFKDQG 72


>gi|288917999|ref|ZP_06412358.1| DNA repair protein RadC [Frankia sp. EUN1f]
 gi|288350654|gb|EFC84872.1| DNA repair protein RadC [Frankia sp. EUN1f]
          Length = 223

 Score = 83.2 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 43/85 (50%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D +  ++   + S+GT     + +RE++ + L    ++  L HNHP G+P PS AD  +T
Sbjct: 130 DGNGAVLRASLLSQGTSTASTLSVRELLTQVLRCGGSAFGLAHNHPGGDPEPSLADRQVT 189

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAF 88
             I      L +   DH+I+  + +
Sbjct: 190 HRIQEAAEVLGLRFLDHVIVTDETW 214


>gi|323951754|gb|EGB47628.1| RadC family protein DNA repair protein [Escherichia coli H252]
          Length = 61

 Score = 83.2 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 37 LSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           +A +++L HNHPSG   PS AD  +T+ ++  L  ++I V DH+I+G +   SF    +
Sbjct: 1  HNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGL 60

Query: 97 I 97
          +
Sbjct: 61 L 61


>gi|54022910|ref|YP_117152.1| putative DNA repair protein [Nocardia farcinica IFM 10152]
 gi|54014418|dbj|BAD55788.1| putative DNA repair protein [Nocardia farcinica IFM 10152]
          Length = 230

 Score = 82.8 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 42/88 (47%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L  D  + L      + G +D V V +REI+   L     S  +VHNHPSG+P+PS  D 
Sbjct: 131 LICDTQHRLRRHVFVAEGAVDRVAVPVREILNTVLRHDGRSFAVVHNHPSGDPHPSPDDR 190

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAF 88
             T  +      + +   DHI++  + +
Sbjct: 191 RATTLLHAAATTVGLRFLDHIVLAGEHW 218


>gi|332185574|ref|ZP_08387322.1| hypothetical protein SUS17_531 [Sphingomonas sp. S17]
 gi|332014552|gb|EGI56609.1| hypothetical protein SUS17_531 [Sphingomonas sp. S17]
          Length = 130

 Score = 82.8 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 1/96 (1%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           +L     L+       G  D   V +  IV+  +  SA  +++ HNHP G+P PS AD+ 
Sbjct: 36  YLGSERSLLGLRHV-MGHADSARVPLTHIVRDAILFSARGVLIAHNHPGGDPRPSAADLA 94

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +T+ +   L+ L + + DH+I G     S + L ++
Sbjct: 95  LTRRLAQGLDLLEVRLFDHLIFGSGQVTSLRALGML 130


>gi|126698739|ref|YP_001087636.1| DNA repair protein [Clostridium difficile 630]
 gi|122974104|sp|Q18B06|Y1144_CLOD6 RecName: Full=UPF0758 protein CD1144
 gi|115250176|emb|CAJ67997.1| DNA repair protein RadC homolog [Clostridium difficile]
          Length = 235

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 41/69 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I+D   S GT+    V+ RE+ +  +  SA+ II++HNHPSG+  PS  D 
Sbjct: 139 VLLNTKNEIISDVDVSIGTLSSSLVHPREVFKEAIRRSASKIIVMHNHPSGSVEPSREDK 198

Query: 61  NMTQNIITT 69
           N+T  +I  
Sbjct: 199 NITSRLIKC 207


>gi|296451131|ref|ZP_06892872.1| DNA repair protein RadC [Clostridium difficile NAP08]
 gi|296880517|ref|ZP_06904479.1| DNA repair protein RadC [Clostridium difficile NAP07]
 gi|296259952|gb|EFH06806.1| DNA repair protein RadC [Clostridium difficile NAP08]
 gi|296428471|gb|EFH14356.1| DNA repair protein RadC [Clostridium difficile NAP07]
          Length = 235

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 41/69 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I+D   S GT+    V+ RE+ +  +  SA+ II++HNHPSG+  PS  D 
Sbjct: 139 VLLNTKNEIISDVDVSVGTLSSSLVHPREVFKEAIRRSASKIIVMHNHPSGSVEPSREDK 198

Query: 61  NMTQNIITT 69
           N+T  +I  
Sbjct: 199 NITSRLIKC 207


>gi|254974678|ref|ZP_05271150.1| DNA repair protein [Clostridium difficile QCD-66c26]
 gi|255092066|ref|ZP_05321544.1| DNA repair protein [Clostridium difficile CIP 107932]
 gi|255100158|ref|ZP_05329135.1| DNA repair protein [Clostridium difficile QCD-63q42]
 gi|255306048|ref|ZP_05350220.1| DNA repair protein [Clostridium difficile ATCC 43255]
 gi|255313803|ref|ZP_05355386.1| DNA repair protein [Clostridium difficile QCD-76w55]
 gi|255516484|ref|ZP_05384160.1| DNA repair protein [Clostridium difficile QCD-97b34]
 gi|255649584|ref|ZP_05396486.1| DNA repair protein [Clostridium difficile QCD-37x79]
 gi|260682749|ref|YP_003214034.1| DNA repair protein [Clostridium difficile CD196]
 gi|260686347|ref|YP_003217480.1| DNA repair protein [Clostridium difficile R20291]
 gi|306519710|ref|ZP_07406057.1| DNA repair protein [Clostridium difficile QCD-32g58]
 gi|260208912|emb|CBA61903.1| DNA repair protein [Clostridium difficile CD196]
 gi|260212363|emb|CBE03177.1| DNA repair protein [Clostridium difficile R20291]
          Length = 219

 Score = 82.4 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 41/69 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I+D   S GT+    V+ RE+ +  +  SA+ II++HNHPSG+  PS  D 
Sbjct: 123 VLLNTKNEIISDVDVSIGTLSSSLVHPREVFKEAIRRSASKIIVMHNHPSGSVEPSREDK 182

Query: 61  NMTQNIITT 69
           N+T  +I  
Sbjct: 183 NITSRLIKC 191


>gi|241895713|ref|ZP_04783009.1| possible DNA repair protein RadC [Weissella paramesenteroides ATCC
           33313]
 gi|241871080|gb|EER74831.1| possible DNA repair protein RadC [Weissella paramesenteroides ATCC
           33313]
          Length = 144

 Score = 82.0 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 43/93 (46%)

Query: 5   KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQ 64
               +I     + GT+D V ++ R++ +  +  +A   IL H HPSGN N S AD +   
Sbjct: 34  TQMTIIEIYQVALGTLDSVSIHPRDVFRHLVATNAYGFILCHYHPSGNLNASSADKSAMS 93

Query: 65  NIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            +      + +   D +II    + S++   ++
Sbjct: 94  QMAMCSQIMQVHFLDFMIISTKGYRSYRTEHLL 126


>gi|282857436|ref|ZP_06266669.1| DNA repair protein RadC [Pyramidobacter piscolens W5455]
 gi|282584721|gb|EFB90056.1| DNA repair protein RadC [Pyramidobacter piscolens W5455]
          Length = 239

 Score = 82.0 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 50/88 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++LD+ ++ IADE  S G +D   +    +++R + L+  ++ LVHNHP G+  PSD D+
Sbjct: 130 IYLDRKDVPIADERLSYGGVDGAMLDAPYLMRRAVRLNCAALALVHNHPDGDLTPSDDDL 189

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAF 88
            +++++   L  L I  + H I G    
Sbjct: 190 FLSRSVARMLQVLQIGYYGHYIAGGGRI 217


>gi|255655143|ref|ZP_05400552.1| DNA repair protein [Clostridium difficile QCD-23m63]
          Length = 219

 Score = 82.0 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 41/69 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L+  N +I+D   S GT+    V+ RE+ +  +  SA+ II++HNHPSG+  PS  D 
Sbjct: 123 VLLNTKNEIISDVDVSVGTLSSSLVHPREVFKEAIRRSASKIIVMHNHPSGSVEPSREDK 182

Query: 61  NMTQNIITT 69
           N+T  +I  
Sbjct: 183 NITSRLIKC 191


>gi|116750704|ref|YP_847391.1| DNA repair protein RadC [Syntrophobacter fumaroxidans MPOB]
 gi|116699768|gb|ABK18956.1| DNA repair protein RadC [Syntrophobacter fumaroxidans MPOB]
          Length = 225

 Score = 82.0 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/93 (44%), Positives = 57/93 (61%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N LI  E   RG+++   V+ R +V+  L+  AT++IL HNHP G+PNPS AD  +
Sbjct: 130 LNSTNDLIQMEEIQRGSVNRTAVFPRLVVEASLKHRATAVILAHNHPGGDPNPSAADQQL 189

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLR 95
           T+ +   LN L+IIVHDHIII    + SF    
Sbjct: 190 TRRLKRILNDLDIIVHDHIIIAGPRYYSFAEHG 222


>gi|260655709|ref|ZP_05861182.1| DNA repair protein RadC [Jonquetella anthropi E3_33 E1]
 gi|260629626|gb|EEX47820.1| DNA repair protein RadC [Jonquetella anthropi E3_33 E1]
          Length = 229

 Score = 81.3 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 2/91 (2%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           F D  + L+ DE  S G  D   + +  +++R + L    + L+HNHP     PS  D  
Sbjct: 131 FFDDQDRLLGDERLSYGGPDGAALDMPYLLRRAVRLDCRGVALLHNHPDRVSEPSMEDRK 190

Query: 62  MTQNIITTLNPLNIIVHDH-IIIGKD-AFVS 90
           +T  +   L  LNI    H +I+G   + VS
Sbjct: 191 LTDYLACRLELLNIRFIGHFLIVGGRVSVVS 221


>gi|189346988|ref|YP_001943517.1| DNA repair protein RadC [Chlorobium limicola DSM 245]
 gi|189341135|gb|ACD90538.1| DNA repair protein RadC [Chlorobium limicola DSM 245]
          Length = 77

 Score = 80.5 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 1/60 (1%)

Query: 38 SATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRI 96
          +A ++ILVHNHPSGNP PS+AD  +T+ I ++ N + I + DH+IIG    + SF+   +
Sbjct: 16 NAYTLILVHNHPSGNPEPSNADKQVTKQIRSSANIIGIELLDHVIIGTNGNYFSFRQEGL 75


>gi|254258430|ref|ZP_04949484.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1710a]
 gi|254217119|gb|EET06503.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1710a]
          Length = 454

 Score = 80.5 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/76 (40%), Positives = 47/76 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + L+  E  + G++  + VY REIV+R L L+A ++I+ HNHPSG   PS AD 
Sbjct: 182 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 241

Query: 61  NMTQNIITTLNPLNII 76
            +T+ +   L  ++I 
Sbjct: 242 RLTRVLRDALALVDIK 257


>gi|103486819|ref|YP_616380.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256]
 gi|98976896|gb|ABF53047.1| DNA repair protein RadC [Sphingopyxis alaskensis RB2256]
          Length = 181

 Score = 80.5 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 4/100 (4%)

Query: 1   LFL---DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSD 57
           L L   D +  L+  E     T     +      +  L   A ++++ HNHPSG   PSD
Sbjct: 83  LLLAGFDTYQRLVRLERIDGETPRRCII-PPRCWRALLGGGAATVVMAHNHPSGIAWPSD 141

Query: 58  ADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           AD+  T++    L  + + + DH+I   D   SF+   ++
Sbjct: 142 ADMAATRDAARFLRTIGVDLVDHLIFVADGHFSFRTAGML 181


>gi|162448723|ref|YP_001611090.1| DNA repair protein [Sorangium cellulosum 'So ce 56']
 gi|161159305|emb|CAN90610.1| DNA repair protein [Sorangium cellulosum 'So ce 56']
          Length = 208

 Score = 78.6 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 43/87 (49%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD H  +    + +RG  D V      I++  L+++A   +L HNHPSG+P P+  D  M
Sbjct: 117 LDSHGRVRETRMLARGVDDAVHAGRSTILRTALDMAAVGFVLAHNHPSGDPTPTAEDHAM 176

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFV 89
           T+ +      LN+ +  H+I+      
Sbjct: 177 TEELRDLSYALNVPLRAHVIVTPSGRY 203


>gi|257893433|ref|ZP_05673086.1| predicted protein [Enterococcus faecium 1,231,408]
 gi|289566512|ref|ZP_06446935.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|257829812|gb|EEV56419.1| predicted protein [Enterococcus faecium 1,231,408]
 gi|289161666|gb|EFD09543.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
          Length = 68

 Score = 78.6 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 28/51 (54%)

Query: 47 NHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +PSGN  PS  D+N T+ I      + I V DH+IIG+  + S +   ++
Sbjct: 15 YYPSGNVIPSQQDMNFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 65


>gi|257879581|ref|ZP_05659234.1| DNA repair protein RadC [Enterococcus faecium 1,230,933]
 gi|257882600|ref|ZP_05662253.1| DNA repair protein RadC [Enterococcus faecium 1,231,502]
 gi|257813809|gb|EEV42567.1| DNA repair protein RadC [Enterococcus faecium 1,230,933]
 gi|257818258|gb|EEV45586.1| DNA repair protein RadC [Enterococcus faecium 1,231,502]
          Length = 72

 Score = 78.6 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 28/51 (54%)

Query: 47 NHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           +PSGN  PS  D+N T+ I      + I V DH+IIG+  + S +   ++
Sbjct: 19 YYPSGNVIPSQQDMNFTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 69


>gi|320528575|ref|ZP_08029731.1| DNA repair protein [Solobacterium moorei F0204]
 gi|320131029|gb|EFW23603.1| DNA repair protein [Solobacterium moorei F0204]
          Length = 682

 Score = 78.6 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L+  N  I   V +   IDH  + IR + +  +  +A+ ++++HNHP+ +   SD+D   
Sbjct: 65  LNSANEPINFSVATMKAIDHAGMDIRNLFKSTVSSNASKVMVLHNHPNEHVVISDSDKIF 124

Query: 63  TQNIITTLNPLNIIVHDHIII--GKDAFVSFKGLRII 97
           T NI      LN+   DH+++  G +   SF+   ++
Sbjct: 125 TANIYAATQQLNLEFVDHVVVSKGAEEIYSFRENGLL 161


>gi|300919527|ref|ZP_07136025.1| DNA repair protein [Escherichia coli MS 115-1]
 gi|300413421|gb|EFJ96731.1| DNA repair protein [Escherichia coli MS 115-1]
          Length = 56

 Score = 78.2 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 42 IILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          +IL HNHPSG   PS AD  +TQ ++  L  ++I V DH+I+G     SF    ++
Sbjct: 1  MILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 56


>gi|271963692|ref|YP_003337888.1| DNA repair protein RadC [Streptosporangium roseum DSM 43021]
 gi|270506867|gb|ACZ85145.1| DNA repair protein RadC [Streptosporangium roseum DSM 43021]
          Length = 218

 Score = 78.2 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 42/80 (52%)

Query: 9   LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68
           +    + S G  DH P  +REI+   L    +S  L HNHPSG+ +PS AD+ +T  +  
Sbjct: 134 VTRKTIVSEGGSDHAPAPVREIITTVLTSGGSSFGLAHNHPSGSLDPSPADLEVTARLSE 193

Query: 69  TLNPLNIIVHDHIIIGKDAF 88
               + + + DH+I+   A+
Sbjct: 194 AAETVGLRLLDHVIVTDTAW 213


>gi|307693174|ref|ZP_07635411.1| DNA repair protein RadC [Ruminococcaceae bacterium D16]
          Length = 229

 Score = 78.2 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 40/93 (43%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD    ++     + G+I+   +  R I +  + L A  + + HNH S    PS AD 
Sbjct: 127 LCLDGKRQVLGVRKVAEGSIEMAEMNARRIAEEAMGLRAARVYVAHNHVSNLAIPSQADW 186

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
             T  +   L P+ I + DH++      VS   
Sbjct: 187 LTTDTLRAILAPIGITLEDHLVFVDGDMVSLNE 219


>gi|325677919|ref|ZP_08157561.1| DNA repair protein RadC [Ruminococcus albus 8]
 gi|324110473|gb|EGC04647.1| DNA repair protein RadC [Ruminococcus albus 8]
          Length = 229

 Score = 77.4 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 1/94 (1%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           +K   +    V S G  D V   + E+ +  L   A +++L HNHP G  +PSD DI MT
Sbjct: 133 NKSGRISGCSVLSVGISDKVCFNVEELERFLLYNHADALVLSHNHPFGRGDPSDEDIMMT 192

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           + I   L    I + DH+I+G D   S + + I+
Sbjct: 193 RQIQAMLAG-RISLMDHVIVGADKVCSMRMMGIL 225


>gi|301327414|ref|ZP_07220657.1| DNA repair protein [Escherichia coli MS 78-1]
 gi|300846002|gb|EFK73762.1| DNA repair protein [Escherichia coli MS 78-1]
          Length = 56

 Score = 77.4 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 34/56 (60%)

Query: 42 IILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          ++L HNHPSG   PS AD  +T+ ++  L  ++I V DH+I+G +   SF    ++
Sbjct: 1  MVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL 56


>gi|30022528|ref|NP_834159.1| DNA repair protein radC [Bacillus cereus ATCC 14579]
 gi|29898086|gb|AAP11360.1| DNA repair protein radC [Bacillus cereus ATCC 14579]
          Length = 61

 Score = 77.4 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/55 (47%), Positives = 33/55 (60%)

Query: 43 ILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          I +HNHPSG+P PS  DI +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 7  ICLHNHPSGDPTPSREDIAVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI 61


>gi|256962743|ref|ZP_05566914.1| predicted protein [Enterococcus faecalis HIP11704]
 gi|256953239|gb|EEU69871.1| predicted protein [Enterococcus faecalis HIP11704]
 gi|315578918|gb|EFU91109.1| DNA repair protein [Enterococcus faecalis TX0630]
          Length = 66

 Score = 77.0 bits (189), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 29/62 (46%)

Query: 35 LELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
          +   A  +     HPSGNP PS  DI  T+ +      + I + DHII+G   ++S +  
Sbjct: 1  MGSRAFFVCTKIYHPSGNPTPSPQDIQFTKRMEECGEMMGIQLLDHIIVGDSGYISLREE 60

Query: 95 RI 96
            
Sbjct: 61 NF 62


>gi|163785136|ref|ZP_02179835.1| DNA repair protein RadC [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879597|gb|EDP73402.1| DNA repair protein RadC [Hydrogenivirga sp. 128-5-R1-1]
          Length = 212

 Score = 77.0 bits (189), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 40/79 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++ +  N L+  EV + G+++ +    R+I    ++ +A  IILVHNHP G+  PS  DI
Sbjct: 133 IYTNTLNELLGKEVVAVGSLNVLNARPRDIFYYAIKYNAYGIILVHNHPEGSCEPSKEDI 192

Query: 61  NMTQNIITTLNPLNIIVHD 79
             T  +      +   + D
Sbjct: 193 EFTNLLKKLSLEMGFEILD 211


>gi|331683582|ref|ZP_08384180.1| putative DNA repair protein [Escherichia coli H299]
 gi|331079195|gb|EGI50395.1| putative DNA repair protein [Escherichia coli H299]
          Length = 118

 Score = 77.0 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 34/51 (66%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L HNHPSG
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSG 117


>gi|330503745|ref|YP_004380614.1| DNA repair protein RadC [Pseudomonas mendocina NK-01]
 gi|328918031|gb|AEB58862.1| DNA repair protein RadC [Pseudomonas mendocina NK-01]
          Length = 126

 Score = 76.6 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/59 (44%), Positives = 35/59 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDAD 59
           LFLD  + L+      RGTID   VY RE+V+  L ++A ++I  HNHPSGN +    D
Sbjct: 47  LFLDSQHRLLEYVELFRGTIDAAAVYPREVVKEALRVNAAAVIFSHNHPSGNVHSQSRD 105


>gi|162455784|ref|YP_001618151.1| DNA repair protein RadC [Sorangium cellulosum 'So ce 56']
 gi|161166366|emb|CAN97671.1| DNA repair protein RadC [Sorangium cellulosum 'So ce 56']
          Length = 211

 Score = 76.6 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 44/87 (50%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD H  +    + +RG+ D + V    +++  L+++A S +L HNHPSG+P P+  D  M
Sbjct: 120 LDTHGRVRETRLLARGSDDALHVGRATVLRTALDMAAHSFVLAHNHPSGDPTPTREDEAM 179

Query: 63  TQNIITTLNPLNIIVHDHIIIGKDAFV 89
           T  +      L + +  H+I+      
Sbjct: 180 TLELRHLSAELLVPLTAHVIVTPSGRY 206


>gi|325264187|ref|ZP_08130919.1| DNA repair protein RadC [Clostridium sp. D5]
 gi|324030671|gb|EGB91954.1| DNA repair protein RadC [Clostridium sp. D5]
          Length = 171

 Score = 76.2 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           L  +  +I   +   GT+D   V  RE+ +  +  +A SIIL+HNHPSG+ NPS+ D  +
Sbjct: 50  LKANGQIINMNIVCMGTLDQAIVSPREVFKSSILSNARSIILMHNHPSGSLNPSNEDKRI 109

Query: 63  TQNIITTLNPLNIIVHDHIII--GKDAFVSFKGLRII 97
           T+ +      L I + DHIII        SFK    +
Sbjct: 110 TRRLWECGRLLGIDIADHIIIAGTSGEMFSFKERGYL 146


>gi|149276080|ref|ZP_01882225.1| putative DNA repair protein [Pedobacter sp. BAL39]
 gi|149233508|gb|EDM38882.1| putative DNA repair protein [Pedobacter sp. BAL39]
          Length = 83

 Score = 75.9 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query: 34 CLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
           +   A+ I+L HNHPS N  PS ADI++T  I      LNI + DH+I+  D ++SF  
Sbjct: 4  AINSGASGIVLAHNHPSMNLAPSKADIDITNQIKQGAALLNIKLIDHLIVTSDGYLSFAD 63

Query: 94 LRII 97
           +++
Sbjct: 64 RQML 67


>gi|147677151|ref|YP_001211366.1| DNA repair proteins [Pelotomaculum thermopropionicum SI]
 gi|146273248|dbj|BAF58997.1| DNA repair proteins [Pelotomaculum thermopropionicum SI]
          Length = 196

 Score = 75.9 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDA 58
           L L+  N +I  +  S GT++   V+ RE+ +  ++ SA +IILVHNHPSG+P P   
Sbjct: 135 LLLNTKNQVIGVDKVSVGTLNSSTVHPRELFRNAIKRSAAAIILVHNHPSGDPTPLKE 192


>gi|312902907|ref|ZP_07762104.1| DNA repair protein [Enterococcus faecalis TX0635]
 gi|310633679|gb|EFQ16962.1| DNA repair protein [Enterococcus faecalis TX0635]
          Length = 66

 Score = 75.9 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 30/62 (48%)

Query: 35 LELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
          +   A  I    +HPSGNP PS  DI  T+ +      + I + DHII+G   ++S +  
Sbjct: 1  MGSRAFFICTKIHHPSGNPTPSPQDIQFTKRMEECGEMMGIQLLDHIIVGDSGYISLREE 60

Query: 95 RI 96
            
Sbjct: 61 NF 62


>gi|288574635|ref|ZP_06392992.1| DNA repair protein RadC [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570376|gb|EFC91933.1| DNA repair protein RadC [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 214

 Score = 75.9 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 43/85 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +FL      ++ E+ S G  D   + IR  ++  + L A  ++LVHNHP G+   S  D 
Sbjct: 123 IFLGDRERFLSKEMISFGGPDGASLDIRHFMRVAVRLDAYGVVLVHNHPDGSLESSAEDR 182

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGK 85
            +T+ +   L+ L I  H H I+ +
Sbjct: 183 TLTRIVRERLDALGIRFHGHYIVSR 207


>gi|154246894|ref|YP_001417852.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2]
 gi|154160979|gb|ABS68195.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2]
          Length = 106

 Score = 75.9 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/64 (54%), Positives = 43/64 (67%)

Query: 34  CLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
             +    S  ++HNHPSG+P PS ADI+MT+ II    PL I VHDHII+GKD   S KG
Sbjct: 43  AFQYDKASRRMMHNHPSGDPTPSRADIDMTRKIIDVAKPLGIEVHDHIIVGKDGHASLKG 102

Query: 94  LRII 97
           LR+I
Sbjct: 103 LRLI 106


>gi|158312692|ref|YP_001505200.1| DNA repair protein RadC [Frankia sp. EAN1pec]
 gi|158108097|gb|ABW10294.1| DNA repair protein RadC [Frankia sp. EAN1pec]
          Length = 220

 Score = 75.5 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 41/80 (51%)

Query: 9   LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68
           ++   + ++G   H P+ +R+++   L    ++  + HNHP GNP PS  D  +T  +  
Sbjct: 135 ILRARLLTQGASGHSPLSMRDLLGYVLRCGGSAFGVAHNHPDGNPEPSADDRRVTTRLRE 194

Query: 69  TLNPLNIIVHDHIIIGKDAF 88
           +   L +   DH++I  + +
Sbjct: 195 SAALLGLRFLDHVVITDETW 214


>gi|254777459|ref|ZP_05218975.1| DNA repair protein RadC [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 196

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D  N +      S G +    V +REI+   L     +  + HNHPSG    SDAD  +T
Sbjct: 108 DSANHVKKVVTVSEGALARSIVPVREILNAVLRHDGRAFAIAHNHPSGAAEASDADRQVT 167

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAF 88
            ++      + +    H+++  D +
Sbjct: 168 ASVRAAATTVGLRFLGHVVVANDRW 192


>gi|329296438|ref|ZP_08253774.1| hypothetical protein Pstas_07243 [Plautia stali symbiont]
          Length = 195

 Score = 75.1 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDA 58
           LFLD  + ++  +    G+I  V V+ REIV+  L+L+A ++IL  NHPSG   P+ A
Sbjct: 122 LFLDNQHRVLQAQKMFSGSIASVEVHPREIVREALKLNAAAVILARNHPSGMAEPNRA 179


>gi|313891748|ref|ZP_07825353.1| putative DNA repair protein RadC [Dialister microaerophilus UPII
           345-E]
 gi|313119742|gb|EFR42929.1| putative DNA repair protein RadC [Dialister microaerophilus UPII
           345-E]
          Length = 176

 Score = 74.7 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D H   I     SRGT++   ++ R+I QR + ++A +I L HNHPSG+  PSD D  + 
Sbjct: 54  DCHMKPIGVFELSRGTLNQGIMHARDIFQRAIMVNAYAIFLAHNHPSGDSTPSDMDDILY 113

Query: 64  QNIITTLNPLNIIVHD-HIIIGKDAFVSFKGL 94
             +      + I + D ++I+ ++ + S    
Sbjct: 114 LQLKEDGIRMGIPIKDSYVIVDENNYTSIPEH 145


>gi|221235766|ref|YP_002518203.1| DNA repair protein RadC [Caulobacter crescentus NA1000]
 gi|220964939|gb|ACL96295.1| DNA repair protein radC [Caulobacter crescentus NA1000]
          Length = 56

 Score = 74.7 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/56 (46%), Positives = 39/56 (69%)

Query: 42 IILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          ++ +HNHPSG+P PS  DI+MT+ I+     L I VHDH+++G+D   SFK L ++
Sbjct: 1  MLFMHNHPSGDPTPSRPDIDMTKQIVEAGKALKIAVHDHLVVGRDGVASFKALGLM 56


>gi|329121118|ref|ZP_08249749.1| DNA repair protein RadC [Dialister micraerophilus DSM 19965]
 gi|327471280|gb|EGF16734.1| DNA repair protein RadC [Dialister micraerophilus DSM 19965]
          Length = 176

 Score = 73.9 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D H   I     SRGT++   ++ R+I QR + ++A +I L HNHP G+  PSD D  + 
Sbjct: 54  DCHMKPIGVFELSRGTLNQGIMHARDIFQRAIMVNAYAIFLAHNHPGGDSTPSDMDDILY 113

Query: 64  QNIITTLNPLNIIVHD-HIIIGKDAFVSFKGL 94
             +      + I + D ++I+ ++ + S    
Sbjct: 114 LQLKEDGIRMGIPIKDSYVIVDRNNYTSIPEH 145


>gi|171464047|ref|YP_001798160.1| DNA repair protein RadC [Polynucleobacter necessarius subsp.
          necessarius STIR1]
 gi|171193585|gb|ACB44546.1| DNA repair protein RadC [Polynucleobacter necessarius subsp.
          necessarius STIR1]
          Length = 59

 Score = 73.5 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 33/54 (61%)

Query: 44 LVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          + HNHPSGNP PSDAD  +T+ ++  L  ++I + DH I+    F SF    ++
Sbjct: 1  MAHNHPSGNPLPSDADQELTKVLVNALQLVDIQLLDHCIVSGSGFFSFSDSGLM 54


>gi|56552322|ref|YP_163161.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761621|ref|ZP_04759708.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260753987|ref|YP_003226880.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|56543896|gb|AAV90050.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373929|gb|EER63462.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258553350|gb|ACV76296.1| DNA repair protein RadC [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 141

 Score = 73.5 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 40/76 (52%)

Query: 22  HVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHI 81
              + IR I++  + LSA S+IL HNHPSG+P PS  D + T+ +        I + DH+
Sbjct: 66  ASYLDIRNILRHAIILSADSLILAHNHPSGDPTPSYMDRDTTKRLALVTRMAGIKLLDHL 125

Query: 82  IIGKDAFVSFKGLRII 97
           I       SF  + ++
Sbjct: 126 IFANKKCQSFHSIGLL 141


>gi|167647805|ref|YP_001685468.1| DNA repair protein RadC [Caulobacter sp. K31]
 gi|167350235|gb|ABZ72970.1| DNA repair protein RadC [Caulobacter sp. K31]
          Length = 53

 Score = 72.8 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/52 (48%), Positives = 36/52 (69%)

Query: 45 VHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
          +HNHPSG+P PS  DI+MT+ I+     L I VHDH+++G++   SFK L +
Sbjct: 1  MHNHPSGDPTPSRPDIDMTKQIVEAGKALKINVHDHLVVGREGVASFKALGL 52


>gi|13471142|ref|NP_102711.1| DNA repair protein [Mesorhizobium loti MAFF303099]
 gi|14021886|dbj|BAB48497.1| probable DNA repair protein [Mesorhizobium loti MAFF303099]
          Length = 66

 Score = 72.4 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/54 (59%), Positives = 38/54 (70%)

Query: 44 LVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          L+HNHPSG+P PS ADI MT+ II     L I VHDHIIIG+  + S KGL +I
Sbjct: 13 LMHNHPSGDPTPSRADIEMTKEIIEAGKRLGIAVHDHIIIGRKGYASMKGLLLI 66


>gi|218905656|ref|YP_002453490.1| DNA repair protein [Bacillus cereus AH820]
 gi|218538266|gb|ACK90664.1| DNA repair protein [Bacillus cereus AH820]
          Length = 186

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 32/53 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNHPSG+P
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNHPSGDP 181


>gi|209886704|ref|YP_002290561.1| DNA repair protein RadC [Oligotropha carboxidovorans OM5]
 gi|209874900|gb|ACI94696.1| DNA repair protein RadC [Oligotropha carboxidovorans OM5]
          Length = 205

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/52 (71%), Positives = 44/52 (84%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52
           LFLDK N LIADE+Q  GT+DH PVY RE+V+R LELSAT+IILVHNHP+ +
Sbjct: 143 LFLDKRNQLIADELQQVGTVDHTPVYPREVVKRALELSATAIILVHNHPTSS 194


>gi|148975028|ref|ZP_01812008.1| DNA repair protein RadC [Vibrionales bacterium SWAT-3]
 gi|145965537|gb|EDK30786.1| DNA repair protein RadC [Vibrionales bacterium SWAT-3]
          Length = 128

 Score = 71.6 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           LFLD  + ++  +    GT++   VY RE+V+  L  +A+++IL HNHPSG   P  A +
Sbjct: 65  LFLDNQHRVLRTQEMFYGTVNAASVYPREVVKASLVTNASAVILYHNHPSGA--PRSAYV 122

Query: 61  NM 62
             
Sbjct: 123 KR 124


>gi|23099511|ref|NP_692977.1| DNA repair protein [Oceanobacillus iheyensis HTE831]
 gi|22777740|dbj|BAC14012.1| DNA repair protein (RadC family) [Oceanobacillus iheyensis HTE831]
          Length = 191

 Score = 71.2 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 32/51 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51
           LFL+  N +I  +    G+++   V+ RE+ +  ++ SA S+I+ HNHPSG
Sbjct: 133 LFLNTKNQIIHYQTVFIGSLNASIVHPREVFKEAVKRSAASLIVAHNHPSG 183


>gi|154246981|ref|YP_001417939.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2]
 gi|154161066|gb|ABS68282.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2]
          Length = 209

 Score = 71.2 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/50 (66%), Positives = 42/50 (84%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLDK N LIADEV   GT+DH PVY RE+V+R LE+SA+++IL+HNHP+
Sbjct: 138 LFLDKRNQLIADEVLQTGTVDHAPVYPREVVKRALEVSASAVILLHNHPT 187


>gi|299132649|ref|ZP_07025844.1| DNA repair protein RadC [Afipia sp. 1NLS2]
 gi|298592786|gb|EFI52986.1| DNA repair protein RadC [Afipia sp. 1NLS2]
          Length = 205

 Score = 71.2 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/50 (74%), Positives = 43/50 (86%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLDK N LIADE+Q  GT+DH PVY RE+V+R LELSAT+IILVHNHP+
Sbjct: 143 LFLDKRNQLIADELQQVGTVDHTPVYPREVVKRALELSATAIILVHNHPT 192


>gi|148258571|ref|YP_001243156.1| DNA repair protein RadC [Bradyrhizobium sp. BTAi1]
 gi|146410744|gb|ABQ39250.1| DNA repair protein RadC [Bradyrhizobium sp. BTAi1]
          Length = 203

 Score = 70.9 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/50 (74%), Positives = 43/50 (86%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLDK N LIADEVQ  GT+DH PVY RE+++R LELSAT+IILVHNHP+
Sbjct: 141 LFLDKRNQLIADEVQQTGTVDHTPVYPREVIKRALELSATAIILVHNHPT 190


>gi|205374326|ref|ZP_03227124.1| DNA repair protein RadC [Bacillus coahuilensis m4-4]
          Length = 59

 Score = 70.5 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 43 ILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          I +   P  +P PS  DI +T+ ++     + I V DH+IIG+  +VS K    I
Sbjct: 6  IFLAFLP-NDPTPSREDIEVTKRLVECGKIIGIEVLDHLIIGEKKYVSLKEKGYI 59


>gi|5825428|gb|AAD53243.1|AF124649_1 DNA repair protein RadC [Enterococcus faecalis]
          Length = 103

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 34/55 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNP 55
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSGNP P
Sbjct: 49  IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTP 103


>gi|56459747|ref|YP_155028.1| RadC family protein [Idiomarina loihiensis L2TR]
 gi|56178757|gb|AAV81479.1| RadC family protein [Idiomarina loihiensis L2TR]
          Length = 152

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L LD  + LI +     G      +    + +  L+++A ++I+ +  PS   N SD + 
Sbjct: 62  LLLDSQHRLIDNVEFEEGE----ELAASMVYREVLKVNAAAVIVSYFSPSKELNHSDKEH 117

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            ++  + + LN +++ + D +++     VS     ++
Sbjct: 118 ELS-TLKSALNLIDVSLLDCMLVTD-EVVSLAERGLL 152


>gi|67459702|ref|YP_247326.1| DNA repair protein RadC [Rickettsia felis URRWXCal2]
 gi|67005235|gb|AAY62161.1| DNA repair protein RadC [Rickettsia felis URRWXCal2]
          Length = 155

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/54 (66%), Positives = 42/54 (77%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPN 54
           LFL+K NILIADEV S+GTID   VY REI++R L   A+S+ILVHNHPSG  N
Sbjct: 95  LFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASSLILVHNHPSGALN 148


>gi|26989216|ref|NP_744641.1| RadC family protein [Pseudomonas putida KT2440]
 gi|24984058|gb|AAN68105.1|AE016442_6 RadC family protein [Pseudomonas putida KT2440]
          Length = 182

 Score = 70.5 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 32/51 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51
           L LD  + +I      RGT+D   VY RE+V+  LE +A + +LVHNHPSG
Sbjct: 69  LLLDSRHRVIVFHELFRGTLDSASVYPREVVKTALEHNAAATVLVHNHPSG 119


>gi|27383284|ref|NP_774813.1| DNA repair protein [Bradyrhizobium japonicum USDA 110]
 gi|27356458|dbj|BAC53438.1| radC [Bradyrhizobium japonicum USDA 110]
          Length = 206

 Score = 70.1 bits (171), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/56 (66%), Positives = 46/56 (82%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPS 56
           LFLDK N LIADEVQ  GT+DH PVY RE+++R LELSAT++ILVHNHP+ +P  +
Sbjct: 144 LFLDKRNQLIADEVQQTGTVDHTPVYPREVIKRALELSATALILVHNHPTTHPMIT 199


>gi|298292919|ref|YP_003694858.1| DNA repair protein RadC [Starkeya novella DSM 506]
 gi|296929430|gb|ADH90239.1| DNA repair protein RadC [Starkeya novella DSM 506]
          Length = 217

 Score = 70.1 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/50 (68%), Positives = 43/50 (86%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLDK N LI DEVQ RGT+DH PVY RE+V+R LE++A+++ILVHNHP+
Sbjct: 155 LFLDKRNQLILDEVQQRGTVDHTPVYPREVVKRALEVAASAVILVHNHPT 204


>gi|209883200|ref|YP_002287057.1| hypothetical protein OCAR_4040 [Oligotropha carboxidovorans OM5]
 gi|209871396|gb|ACI91192.1| conserved domain protein [Oligotropha carboxidovorans OM5]
          Length = 65

 Score = 70.1 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/63 (49%), Positives = 43/63 (68%)

Query: 35 LELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
              + +  L+HNHPSG+P PS ADI MT++I+    PL I VHDHII+GK+   S KG+
Sbjct: 3  YLCFSMASKLMHNHPSGDPTPSQADIQMTKSIVAISAPLGISVHDHIIVGKNGHSSLKGM 62

Query: 95 RII 97
          R++
Sbjct: 63 RLM 65


>gi|325278816|ref|YP_004251358.1| DNA repair protein RadC [Odoribacter splanchnicus DSM 20712]
 gi|324310625|gb|ADY31178.1| DNA repair protein RadC [Odoribacter splanchnicus DSM 20712]
          Length = 148

 Score = 70.1 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 49/97 (50%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           + L  ++ ++     S     +  V  + I+Q  +  +A SII+V N PSG+  P+DA+ 
Sbjct: 52  ILLSGNSTVLGVMTVSESAHTYDIVETKFILQAAILANAKSIIVVSNSPSGDLEPNDAEK 111

Query: 61  NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++   I       +I + D+++I  + + SF   +++
Sbjct: 112 DLKNQIKLAAYLFDIELADYLLINNEDYYSFADNKVL 148


>gi|254931489|ref|ZP_05264848.1| DNA repair protein RadC [Listeria monocytogenes HPB2262]
 gi|293583041|gb|EFF95073.1| DNA repair protein RadC [Listeria monocytogenes HPB2262]
          Length = 185

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53
           LFL+  N +I  +    G ++   V+ RE+ +  L  SA SI+  HNHPSG+P
Sbjct: 128 LFLNTKNQVIYRQTIFVGGLNASIVHPREVFRLALRKSAASIMCFHNHPSGDP 180


>gi|162455783|ref|YP_001618150.1| DNA repair protein [Sorangium cellulosum 'So ce 56']
 gi|161166365|emb|CAN97670.1| DNA repair protein [Sorangium cellulosum 'So ce 56']
          Length = 156

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 42/79 (53%)

Query: 11  ADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTL 70
           A  + +RG+ D + V    +++  L+++A S +L HNHPSG+P P+  D  MT  +    
Sbjct: 73  ARRLLARGSDDALHVGRSTVLRTALDMAAHSFVLAHNHPSGDPTPTREDEAMTLELRHLS 132

Query: 71  NPLNIIVHDHIIIGKDAFV 89
             L++ +  H+I+      
Sbjct: 133 AELHVPLTAHVIVTPSGRY 151


>gi|116328705|ref|YP_798425.1| DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116330637|ref|YP_800355.1| DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|116121449|gb|ABJ79492.1| DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116124326|gb|ABJ75597.1| DNA repair protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 232

 Score = 69.7 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 47/84 (55%)

Query: 9   LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68
           ++  E+ + G+++ V V  R++++  L  +A+S+I+ HNHP  +  PS  D+ + +N   
Sbjct: 138 VLRAEIVAVGSLEEVGVQTRDLLKIILNDAASSVIIAHNHPESSSKPSKEDLWIFENFGR 197

Query: 69  TLNPLNIIVHDHIIIGKDAFVSFK 92
            L+ + + + D  I G D   S K
Sbjct: 198 LLDMIGLELLDQWIFGIDGIYSCK 221


>gi|167647755|ref|YP_001685418.1| DNA repair protein RadC [Caulobacter sp. K31]
 gi|167350185|gb|ABZ72920.1| DNA repair protein RadC [Caulobacter sp. K31]
          Length = 196

 Score = 69.3 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/50 (64%), Positives = 42/50 (84%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLD  N LIADEV + GT+DH PVY RE+++R LELS+++IIL+HNHP+
Sbjct: 134 LFLDNKNQLIADEVMNHGTVDHAPVYPREVMRRALELSSSNIILLHNHPT 183


>gi|120435587|ref|YP_861273.1| DNA repair protein RadC domain-containing protein [Gramella
          forsetii KT0803]
 gi|117577737|emb|CAL66206.1| protein containing domain of DNA repair protein RadC [Gramella
          forsetii KT0803]
          Length = 57

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 45 VHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIG-KDAFVSFKGLRII 97
           HNHPSG   PS+ D  +T+ I      L+I + DH+I+     + SF    I+
Sbjct: 4  AHNHPSGTLKPSETDKRLTEKIRKAGELLDIKILDHLILTPDGDYFSFADSGIL 57


>gi|154244743|ref|YP_001415701.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2]
 gi|154158828|gb|ABS66044.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2]
          Length = 128

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 42/50 (84%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           L+LD+ N LI+DE  + GTIDHVPVY RE+++R L L+A+++I+VHNHP+
Sbjct: 66  LYLDRKNRLISDECLAIGTIDHVPVYPREVLRRSLALNASALIIVHNHPT 115


>gi|221235698|ref|YP_002518135.1| DNA repair protein RadC [Caulobacter crescentus NA1000]
 gi|220964871|gb|ACL96227.1| DNA repair protein radC [Caulobacter crescentus NA1000]
          Length = 221

 Score = 68.9 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/50 (66%), Positives = 44/50 (88%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLDK N LIADEV +RGT+DH PVY RE+++R LELS+++II++HNHP+
Sbjct: 161 LFLDKKNQLIADEVLNRGTVDHAPVYPREVMRRALELSSSNIIILHNHPT 210


>gi|13471076|ref|NP_102645.1| DNA repair protein RadC [Mesorhizobium loti MAFF303099]
 gi|14021820|dbj|BAB48431.1| DNA repair protein; RadC [Mesorhizobium loti MAFF303099]
          Length = 179

 Score = 68.5 bits (167), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/50 (76%), Positives = 43/50 (86%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLDK N LIADEVQ  GT+DH PVY RE+V+R LELSAT+IILVHNHP+
Sbjct: 117 LFLDKKNALIADEVQQTGTVDHTPVYPREVVKRALELSATAIILVHNHPT 166


>gi|205374328|ref|ZP_03227126.1| DNA repair protein RadC [Bacillus coahuilensis m4-4]
          Length = 190

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 30/51 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51
           L+L+  N +I  +    G+++   V+ RE+ +     SA SII +HNHPSG
Sbjct: 132 LYLNTKNQVIHKQTIFIGSLNASIVHPREVYKEAFRRSAASIICIHNHPSG 182


>gi|27375189|ref|NP_766718.1| hypothetical protein bsr0078 [Bradyrhizobium japonicum USDA 110]
 gi|27348325|dbj|BAC45343.1| bsr0078 [Bradyrhizobium japonicum USDA 110]
          Length = 53

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/53 (58%), Positives = 40/53 (75%)

Query: 45 VHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          +HNHPSG+P+PS ADI MT+ II    PL I VHDHII+GK+   S KG+++I
Sbjct: 1  MHNHPSGDPSPSQADIQMTKAIIDIARPLGIAVHDHIIVGKNGHSSLKGMKLI 53


>gi|152976871|ref|YP_001376388.1| DNA repair protein RadC [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025623|gb|ABS23393.1| DNA repair protein RadC [Bacillus cytotoxicus NVH 391-98]
          Length = 185

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 30/51 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51
           L+L+  N ++  +    G+++   V+ RE+ +     +A SII +HNHPSG
Sbjct: 129 LYLNTKNQVMHRQTVFIGSLNASIVHPREVFKEAFRRAAASIICLHNHPSG 179


>gi|24214156|ref|NP_711637.1| DNA repair protein RadC [Leptospira interrogans serovar Lai str.
           56601]
 gi|45658145|ref|YP_002231.1| DNA repair protein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|24195053|gb|AAN48655.1| DNA repair protein RadC [Leptospira interrogans serovar Lai str.
           56601]
 gi|45601387|gb|AAS70868.1| DNA repair protein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
          Length = 232

 Score = 68.5 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 47/84 (55%)

Query: 9   LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68
           ++  EV + G+++ V V  R++++  L  +A+++I+ HNHP  +  PS  D+ + +N  +
Sbjct: 138 VLRAEVVAVGSLEEVGVQTRDLLKIILNDAASAVIIAHNHPESSSKPSKEDLWIYKNFGS 197

Query: 69  TLNPLNIIVHDHIIIGKDAFVSFK 92
            L  + + + D  I G D   S K
Sbjct: 198 LLANIGLELLDQWIFGIDGIYSCK 221


>gi|58699143|ref|ZP_00373968.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534343|gb|EAL58517.1| DNA repair protein RadC, putative [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 197

 Score = 68.2 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 1/76 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   LI +E    G ++  PVYI+EI ++ L  +ATSII+ HNHP G+  PS+ D 
Sbjct: 123 LYLNKRRQLIGEES-YIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSEEDQ 181

Query: 61  NMTQNIITTLNPLNII 76
            +T+++    + +++ 
Sbjct: 182 AVTKSLAAACSTVSVK 197


>gi|23010157|ref|ZP_00050945.1| COG2003: DNA repair proteins [Magnetospirillum magnetotacticum
           MS-1]
          Length = 208

 Score = 68.2 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/50 (70%), Positives = 42/50 (84%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           LFLD+ N LIADEVQ RGT+DH PVY RE+ +R LELS+T+IIL HNHP+
Sbjct: 149 LFLDRRNHLIADEVQGRGTVDHTPVYTREVARRALELSSTAIILAHNHPT 198


>gi|52425996|ref|YP_089133.1| RadC protein [Mannheimia succiniciproducens MBEL55E]
 gi|52308048|gb|AAU38548.1| RadC protein [Mannheimia succiniciproducens MBEL55E]
          Length = 111

 Score = 67.8 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 32/54 (59%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPN 54
          LFLD  + LI  E    GTI+   ++ REI++  L  +A ++IL HNH   +PN
Sbjct: 41 LFLDNQHRLIKQEEMFLGTINSAVIHPREIIKTALYCNAAAMILAHNHLRESPN 94


>gi|294617319|ref|ZP_06696959.1| DNA repair protein RadC [Enterococcus faecium E1679]
 gi|291596428|gb|EFF27681.1| DNA repair protein RadC [Enterococcus faecium E1679]
          Length = 187

 Score = 67.8 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52
           ++LD  N +I  +    G+++    + REI    +   A  I+L HNHPSGN
Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSGN 182


>gi|121591820|ref|ZP_01679006.1| DNA repair protein RadC [Vibrio cholerae 2740-80]
 gi|121546316|gb|EAX56595.1| DNA repair protein RadC [Vibrio cholerae 2740-80]
          Length = 169

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/42 (45%), Positives = 27/42 (64%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSI 42
           LFLD  + +I DE+   GTID   VY RE+V+R L  +A ++
Sbjct: 128 LFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAV 169


>gi|309809938|ref|ZP_07703786.1| DNA repair protein RadC family protein [Lactobacillus iners SPIN
          2503V10-D]
 gi|325913050|ref|ZP_08175423.1| DNA repair protein RadC family protein [Lactobacillus iners UPII
          60-B]
 gi|308169726|gb|EFO71771.1| DNA repair protein RadC family protein [Lactobacillus iners SPIN
          2503V10-D]
 gi|325477730|gb|EGC80869.1| DNA repair protein RadC family protein [Lactobacillus iners UPII
          60-B]
          Length = 60

 Score = 67.4 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 30/53 (56%)

Query: 45 VHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           HNHPS +  PS+ DI +T+ I +    + I   DH I+    ++SFK + ++
Sbjct: 8  SHNHPSEDLTPSEQDIQVTKKISSVSECMGIRFLDHFIVNTGNYLSFKEMELL 60


>gi|268610725|ref|ZP_06144452.1| DNA repair protein RadC [Ruminococcus flavefaciens FD-1]
          Length = 228

 Score = 67.0 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 41/91 (45%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           D+   + +       +   V    R+I    +   A  I + HNHP GN +PS  DI  T
Sbjct: 123 DRTFRITSTHTIYSDSPLEVKALSRDIADFVITSKADRIFIAHNHPIGNASPSAGDIMST 182

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGL 94
             II  L+ L   + DHIIIGK+   S +  
Sbjct: 183 DKIIAALSKLGTALIDHIIIGKNGAYSMRDQ 213


>gi|58040814|ref|YP_192778.1| DNA repair protein RadC [Gluconobacter oxydans 621H]
 gi|58003228|gb|AAW62122.1| DNA repair protein RadC [Gluconobacter oxydans 621H]
          Length = 229

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+LD  N L+ADE       D +    R I  R L L AT++I  H  P        AD+
Sbjct: 138 LYLDNRNRLLADEAAPE--ADSLAERNRAIAIRALALHATALIGFHIRPKE----RPADL 191

Query: 61  -NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
               + +   + PL+I +HD +I  +    S +   ++
Sbjct: 192 SQSARQLDFAMRPLSITLHDVLITNEGRPSSLRQEGLL 229


>gi|307290160|ref|ZP_07570079.1| putative DNA repair protein RadC [Enterococcus faecalis TX0411]
 gi|312902611|ref|ZP_07761816.1| putative DNA repair protein RadC [Enterococcus faecalis TX0635]
 gi|306498788|gb|EFM68286.1| putative DNA repair protein RadC [Enterococcus faecalis TX0411]
 gi|310633949|gb|EFQ17232.1| putative DNA repair protein RadC [Enterococcus faecalis TX0635]
 gi|315145982|gb|EFT89998.1| putative DNA repair protein RadC [Enterococcus faecalis TX2141]
 gi|315578970|gb|EFU91161.1| putative DNA repair protein RadC [Enterococcus faecalis TX0630]
          Length = 191

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 31/51 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSG
Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSG 191


>gi|256962798|ref|ZP_05566969.1| DNA repair protein RadC [Enterococcus faecalis HIP11704]
 gi|256953294|gb|EEU69926.1| DNA repair protein RadC [Enterococcus faecalis HIP11704]
          Length = 196

 Score = 66.6 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 31/51 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51
           ++L+  N +I  +   +G+++    + REI +  ++ S+  I+L HNHPSG
Sbjct: 146 IYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSG 196


>gi|257879529|ref|ZP_05659182.1| DNA repair protein RadC [Enterococcus faecium 1,230,933]
 gi|257883463|ref|ZP_05663116.1| DNA repair protein RadC [Enterococcus faecium 1,231,502]
 gi|257894826|ref|ZP_05674479.1| DNA repair protein RadC [Enterococcus faecium 1,231,408]
 gi|261209045|ref|ZP_05923449.1| DNA repair protein RadC [Enterococcus faecium TC 6]
 gi|289566560|ref|ZP_06446982.1| DNA repair protein RadC [Enterococcus faecium D344SRF]
 gi|257813757|gb|EEV42515.1| DNA repair protein RadC [Enterococcus faecium 1,230,933]
 gi|257819121|gb|EEV46449.1| DNA repair protein RadC [Enterococcus faecium 1,231,502]
 gi|257831205|gb|EEV57812.1| DNA repair protein RadC [Enterococcus faecium 1,231,408]
 gi|260076957|gb|EEW64680.1| DNA repair protein RadC [Enterococcus faecium TC 6]
 gi|289161659|gb|EFD09537.1| DNA repair protein RadC [Enterococcus faecium D344SRF]
          Length = 223

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51
           ++LD  N +I  +    G+++    + REI    +   A  I+L HNHPSG
Sbjct: 131 IYLDTKNQVILKKTVFIGSLNQSVAHPREIFHYAVRYCAARIVLAHNHPSG 181


>gi|221142588|ref|ZP_03567081.1| DNA repair protein RadC-like protein [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|304380747|ref|ZP_07363416.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|304340746|gb|EFM06677.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
          Length = 179

 Score = 66.2 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 32/52 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGD 179


>gi|254796614|ref|YP_003081450.1| DNA repair protein RadC, truncated [Neorickettsia risticii str.
          Illinois]
 gi|254589842|gb|ACT69204.1| DNA repair protein RadC, truncated [Neorickettsia risticii str.
          Illinois]
          Length = 56

 Score = 66.2 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 30/56 (53%)

Query: 42 IILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          +++ HNHPSGNP PS  D+ +T  +      +++ + DH I+      SF    ++
Sbjct: 1  MVIAHNHPSGNPLPSQEDLLLTGKLKKICQKVDVQLVDHFIVTPHDHFSFVVNGLL 56


>gi|262052235|ref|ZP_06024440.1| hypothetical protein SA930_0195 [Staphylococcus aureus 930918-3]
 gi|259159836|gb|EEW44875.1| hypothetical protein SA930_0195 [Staphylococcus aureus 930918-3]
          Length = 180

 Score = 66.2 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 32/52 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGD 179


>gi|257431077|ref|ZP_05607454.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257278025|gb|EEV08673.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           68-397]
          Length = 180

 Score = 66.2 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 32/52 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGD 179


>gi|94310183|ref|YP_583393.1| DNA repair protein RadC [Cupriavidus metallidurans CH34]
          Length = 138

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 29/49 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHP 49
           LFLD  + LI       GTID   V+ RE+V++ L L+A ++I+ H  P
Sbjct: 72  LFLDTRHRLIDYVEMFHGTIDAAEVHPREVVKQALRLNAAAVIVAHYVP 120


>gi|229158070|ref|ZP_04286140.1| DNA repair protein radC [Bacillus cereus ATCC 4342]
 gi|228625389|gb|EEK82146.1| DNA repair protein radC [Bacillus cereus ATCC 4342]
          Length = 51

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/48 (43%), Positives = 27/48 (56%)

Query: 50 SGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          SG+P PS  DI +T+ ++     + I V DHIIIG   FVS K    I
Sbjct: 4  SGDPAPSREDIEVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 51


>gi|163786468|ref|ZP_02180916.1| putative DNA repair protein [Flavobacteriales bacterium ALC-1]
 gi|159878328|gb|EDP72384.1| putative DNA repair protein [Flavobacteriales bacterium ALC-1]
          Length = 110

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 28  REIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDA 87
           + I +   +    ++IL HNHPSGN  PS +DI++T+ ++   N L++ + DH+I+    
Sbjct: 38  QHIFKT-KKTRTCTLILGHNHPSGNLKPSQSDISLTKRLVQDANYLDLKILDHLILTDTT 96

Query: 88  FVSFKGLRII 97
           + SF     I
Sbjct: 97  YTSFADDNTI 106


>gi|258438230|ref|ZP_05689514.1| DNA repair protein RadC [Staphylococcus aureus A9299]
 gi|257848274|gb|EEV72265.1| DNA repair protein RadC [Staphylococcus aureus A9299]
          Length = 185

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 32/52 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGD 179


>gi|15924650|ref|NP_372184.1| DNA repair protein RadC-like protein [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927239|ref|NP_374772.1| hypothetical protein SA1485 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148268141|ref|YP_001247084.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH9]
 gi|150394208|ref|YP_001316883.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH1]
 gi|156979978|ref|YP_001442237.1| DNA repair protein RadC-like protein [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|255006446|ref|ZP_05145047.2| DNA repair protein RadC-like protein [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|295405972|ref|ZP_06815780.1| DNA repair protein RadC [Staphylococcus aureus A8819]
 gi|297245102|ref|ZP_06928979.1| DNA repair protein RadC [Staphylococcus aureus A8796]
 gi|13701457|dbj|BAB42751.1| truncated(radC) [Staphylococcus aureus subsp. aureus N315]
 gi|14247432|dbj|BAB57822.1| DNA repair protein RadC homolog [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|147741210|gb|ABQ49508.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH9]
 gi|149946660|gb|ABR52596.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH1]
 gi|156722113|dbj|BAF78530.1| DNA repair protein RadC homolog [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|285817343|gb|ADC37830.1| truncated DNA repair protein RadC [Staphylococcus aureus 04-02981]
 gi|294968969|gb|EFG44990.1| DNA repair protein RadC [Staphylococcus aureus A8819]
 gi|297178182|gb|EFH37430.1| DNA repair protein RadC [Staphylococcus aureus A8796]
 gi|302751487|gb|ADL65664.1| putative DNA repair protein, RadC [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|329314334|gb|AEB88747.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus T0131]
 gi|329727700|gb|EGG64156.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus 21172]
          Length = 184

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 32/52 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGD 179


>gi|257428443|ref|ZP_05604841.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|293503536|ref|ZP_06667383.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           58-424]
 gi|257275284|gb|EEV06771.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|291095202|gb|EFE25467.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           58-424]
          Length = 184

 Score = 65.8 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 32/52 (61%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG+
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGD 179


>gi|317057607|ref|YP_004106074.1| DNA repair protein RadC [Ruminococcus albus 7]
 gi|315449876|gb|ADU23440.1| DNA repair protein RadC [Ruminococcus albus 7]
          Length = 229

 Score = 65.5 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 1/93 (1%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
           +K   L A  V S G  D +   + E+           +IL HNHP  +  PSD D+  T
Sbjct: 133 NKAGRLTASAVLSAGITDRIAFDVDELKSFIALNCTDILILAHNHPGNSAIPSDEDVIFT 192

Query: 64  QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           + +   L+   +   DH+I+  +   S + L  
Sbjct: 193 RKLRNLLDD-QVCFLDHLIVTNNEVTSMRALGF 224


>gi|323952514|gb|EGB48387.1| RadC family protein DNA repair protein [Escherichia coli H252]
          Length = 111

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILV 45
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L 
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLA 111


>gi|258415751|ref|ZP_05682022.1| DNA repair protein RadC [Staphylococcus aureus A9763]
 gi|258422012|ref|ZP_05684932.1| DNA repair protein RadC [Staphylococcus aureus A9719]
 gi|258444926|ref|ZP_05693246.1| DNA repair protein RadC [Staphylococcus aureus A6300]
 gi|258447980|ref|ZP_05696112.1| DNA repair protein RadC [Staphylococcus aureus A6224]
 gi|258451824|ref|ZP_05699846.1| DNA repair protein RadC [Staphylococcus aureus A5948]
 gi|258454312|ref|ZP_05702281.1| DNA repair protein RadC [Staphylococcus aureus A5937]
 gi|282929335|ref|ZP_06336902.1| DNA repair protein radC [Staphylococcus aureus A10102]
 gi|257839344|gb|EEV63817.1| DNA repair protein RadC [Staphylococcus aureus A9763]
 gi|257842056|gb|EEV66485.1| DNA repair protein RadC [Staphylococcus aureus A9719]
 gi|257856134|gb|EEV79049.1| DNA repair protein RadC [Staphylococcus aureus A6300]
 gi|257858741|gb|EEV81612.1| DNA repair protein RadC [Staphylococcus aureus A6224]
 gi|257860536|gb|EEV83362.1| DNA repair protein RadC [Staphylococcus aureus A5948]
 gi|257863542|gb|EEV86301.1| DNA repair protein RadC [Staphylococcus aureus A5937]
 gi|282589067|gb|EFB94168.1| DNA repair protein radC [Staphylococcus aureus A10102]
 gi|315130708|gb|EFT86694.1| hypothetical protein CGSSa03_10705 [Staphylococcus aureus subsp.
           aureus CGS03]
          Length = 178

 Score = 65.1 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/51 (39%), Positives = 31/51 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSG 178


>gi|257794047|ref|ZP_05643026.1| DNA repair protein RadC [Staphylococcus aureus A9781]
 gi|257788019|gb|EEV26359.1| DNA repair protein RadC [Staphylococcus aureus A9781]
          Length = 173

 Score = 65.1 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/51 (39%), Positives = 31/51 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51
           L L+  N++I +    +GT++   V+ REI    +  +A +II VHNHPSG
Sbjct: 123 LLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSG 173


>gi|295428233|ref|ZP_06820862.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|295127633|gb|EFG57270.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|315195564|gb|EFU25951.1| hypothetical protein CGSSa00_07855 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 184

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 31/52 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52
           L L+  N++I +    +GT++   V+ RE     +  +A +II VHNHPSG+
Sbjct: 128 LLLNSKNVVIKETCVFKGTLNSSIVHPREFFSIAVRENANAIIAVHNHPSGD 179


>gi|261226450|ref|ZP_05940731.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256435|ref|ZP_05948968.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           FRIK966]
          Length = 106

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILV 45
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLA 106


>gi|229158072|ref|ZP_04286142.1| DNA repair protein radC [Bacillus cereus ATCC 4342]
 gi|228625391|gb|EEK82148.1| DNA repair protein radC [Bacillus cereus ATCC 4342]
          Length = 181

 Score = 64.7 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNH 48
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNH
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNH 176


>gi|85713468|ref|ZP_01044458.1| DNA repair protein RadC [Nitrobacter sp. Nb-311A]
 gi|85699372|gb|EAQ37239.1| DNA repair protein RadC [Nitrobacter sp. Nb-311A]
          Length = 53

 Score = 64.7 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/53 (60%), Positives = 41/53 (77%)

Query: 45 VHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          +HN+PSG+P PS ADI MT++II   +PL I VHDHII+GK+   S KGLR+I
Sbjct: 1  MHNYPSGDPTPSQADIQMTRSIIDISSPLGISVHDHIIVGKNGHASLKGLRLI 53


>gi|261226382|ref|ZP_05940663.1| putative DNA repair protein, RADC family [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261256423|ref|ZP_05948956.1| hypothetical protein EscherichiacoliO157EcO_11384 [Escherichia coli
           O157:H7 str. FRIK966]
          Length = 106

 Score = 64.3 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 28/45 (62%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILV 45
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L 
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLA 106


>gi|331683578|ref|ZP_08384177.1| putative DNA repair protein [Escherichia coli H299]
 gi|331079199|gb|EGI50398.1| putative DNA repair protein [Escherichia coli H299]
          Length = 110

 Score = 64.3 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 28/44 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIIL 44
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +++L
Sbjct: 67  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVL 110


>gi|154244682|ref|YP_001415640.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2]
 gi|154158767|gb|ABS65983.1| DNA repair protein RadC [Xanthobacter autotrophicus Py2]
          Length = 70

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 30/54 (55%)

Query: 44 LVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          +VHNHP+G+P PS AD+ MT  I      L + +HDHII G     S +    I
Sbjct: 17 IVHNHPAGDPEPSAADLAMTMEIQKACAALGMTLHDHIITGAGRETSLRARGEI 70


>gi|229048171|ref|ZP_04193740.1| DNA repair protein radC [Bacillus cereus AH676]
 gi|228723158|gb|EEL74534.1| DNA repair protein radC [Bacillus cereus AH676]
          Length = 184

 Score = 63.9 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNH 48
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HNH
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNH 176


>gi|325272067|ref|ZP_08138503.1| hypothetical protein G1E_04282 [Pseudomonas sp. TJI-51]
 gi|324102763|gb|EGC00174.1| hypothetical protein G1E_04282 [Pseudomonas sp. TJI-51]
          Length = 167

 Score = 63.1 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/44 (47%), Positives = 29/44 (65%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIIL 44
           LFLD  +  +A E+  RGTID   VY RE+V+R L  +A ++IL
Sbjct: 112 LFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALLHNAAALIL 155


>gi|196044826|ref|ZP_03112060.1| DNA repair protein [Bacillus cereus 03BB108]
 gi|196024314|gb|EDX62987.1| DNA repair protein [Bacillus cereus 03BB108]
          Length = 192

 Score = 63.1 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNH 48
           L+L+  N +I  +    G+++   V+ RE+ +     +A SII +HN 
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNSSIVHPREVFKEAFRRAAASIICLHNQ 176


>gi|3248969|gb|AAD09944.1| unknown [Coxiella burnetii]
          Length = 142

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 15/82 (18%)

Query: 19  TIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT---QN-----IITTL 70
           + +   V+ REI++R L  ++ ++I+ HNHPSG P+PS AD   T   Q      I    
Sbjct: 55  SFNQASVHPREIIKRALYHNSAALIVAHNHPSGVPDPSQADRAATNPSQRKLSPWIRRAA 114

Query: 71  NPLNIIVHDHIIIGKDAF-VSF 91
             +NI      IIG      SF
Sbjct: 115 CSINI------IIGGSEIRFSF 130


>gi|329113314|ref|ZP_08242095.1| DNA repair protein RadC [Acetobacter pomorum DM001]
 gi|326697139|gb|EGE48799.1| DNA repair protein RadC [Acetobacter pomorum DM001]
          Length = 274

 Score = 62.8 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 10/101 (9%)

Query: 1   LFLDKHNILIADEV----QSRGTIDHVPVYIRE----IVQRCLELSATSIILVH--NHPS 50
           LFLD  N LIADE        G+       IR+    ++QR L L A +++ V       
Sbjct: 166 LFLDSRNQLIADETVPAFLHEGSSHEAMACIRQAVALVLQRALALHACALVTVDLVAENQ 225

Query: 51  GNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
                   +    + +  +   L + VHDHI IG   + SF
Sbjct: 226 TLDQSLAQNAPFVRELQRSAPLLAVEVHDHITIGWGEWRSF 266


>gi|83311181|ref|YP_421445.1| DNA repair protein [Magnetospirillum magneticum AMB-1]
 gi|82946022|dbj|BAE50886.1| DNA repair protein [Magnetospirillum magneticum AMB-1]
          Length = 110

 Score = 62.0 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/48 (62%), Positives = 38/48 (79%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNH 48
          LFLD+ N LIADEVQ  GT+DH P+Y RE+V+R L L A++II+VHN 
Sbjct: 52 LFLDRKNTLIADEVQQTGTVDHTPLYPREVVKRALALHASAIIMVHNR 99


>gi|221142289|ref|ZP_03566782.1| hypothetical protein SauraJ_11752 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|304380031|ref|ZP_07362754.1| RadC domain protein [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|14020981|dbj|BAB47605.1| hypothetical protein [Staphylococcus aureus]
 gi|169403107|emb|CAP17708.1| hypothetical protein [Staphylococcus pseudintermedius]
 gi|269939604|emb|CBI47970.1| DNA repair protein RadC (fragment) [Staphylococcus aureus subsp.
           aureus TW20]
 gi|295443921|dbj|BAJ06391.1| hypothetical protein [Staphylococcus aureus]
 gi|304341351|gb|EFM07267.1| RadC domain protein [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|329312770|gb|AEB87183.1| RadC domain protein [Staphylococcus aureus subsp. aureus T0131]
          Length = 107

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 30/53 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53
           + L+  N     E  S GTI+   ++ REI +  +  +AT +I+ HNHPSG+ 
Sbjct: 51  ICLNSKNEPTHIETVSIGTINFAVIHPREIFKTAILSNATGMIIGHNHPSGDI 103


>gi|293602273|ref|ZP_06684721.1| DNA repair protein RadC [Achromobacter piechaudii ATCC 43553]
 gi|292819352|gb|EFF78385.1| DNA repair protein RadC [Achromobacter piechaudii ATCC 43553]
          Length = 70

 Score = 62.0 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 9  LIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIIT 68
          +IA E   +G      VY RE+V+  +  +A SI++ HN PSG+  PS A + + + + +
Sbjct: 1  MIAFEEMFKGISSETSVYRREVVKAGIRHNAHSILIAHNRPSGSSQPSWAYVEVARRLRS 60

Query: 69 TLNPL 73
            + L
Sbjct: 61 CADRL 65


>gi|288551750|gb|ADC53347.1| hypothetical protein [Staphylococcus aureus]
 gi|302749960|gb|ADL64137.1| conserved hypothetical protein [Staphylococcus aureus subsp.
          aureus str. JKD6008]
          Length = 95

 Score = 61.6 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 30/53 (56%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53
          + L+  N     E  S GTI+   ++ REI +  +  +AT +I+ HNHPSG+ 
Sbjct: 39 ICLNSKNEPTHIETVSIGTINFAVIHPREIFKTAILSNATGMIIGHNHPSGDI 91


>gi|296115177|ref|ZP_06833818.1| DNA repair protein RadC [Gluconacetobacter hansenii ATCC 23769]
 gi|295978278|gb|EFG85015.1| DNA repair protein RadC [Gluconacetobacter hansenii ATCC 23769]
          Length = 266

 Score = 61.2 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPS---D 57
           L LD  N L+ DE  + G+        R I+QR L L A S+++V +   G   P+    
Sbjct: 171 LLLDATNRLVGDERVADGS---AADMCRAILQRVLHLHAVSMVVVWD--GGTVPPTTRQM 225

Query: 58  ADINMTQNIITT-LNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            D       +      L+ ++HD II G   + S +  +++
Sbjct: 226 EDAATVMRQVEAHGRLLSTVMHDCIIAGDGGWTSLRREKML 266


>gi|261207313|ref|ZP_05922000.1| predicted protein [Enterococcus faecium TC 6]
 gi|294616533|ref|ZP_06696311.1| DNA repair protein [Enterococcus faecium E1636]
 gi|294618374|ref|ZP_06697952.1| DNA repair protein [Enterococcus faecium E1679]
 gi|294623247|ref|ZP_06702118.1| DNA repair protein [Enterococcus faecium U0317]
 gi|260078373|gb|EEW66077.1| predicted protein [Enterococcus faecium TC 6]
 gi|291590580|gb|EFF22311.1| DNA repair protein [Enterococcus faecium E1636]
 gi|291595351|gb|EFF26666.1| DNA repair protein [Enterococcus faecium E1679]
 gi|291597354|gb|EFF28534.1| DNA repair protein [Enterococcus faecium U0317]
          Length = 41

 Score = 61.2 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T+ I      + I V DH+IIG+  + S +   ++
Sbjct: 3  FTKRIQKCGEMMGITVLDHLIIGRKRYFSLREEGMM 38


>gi|320667049|gb|EFX34020.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 102

 Score = 60.8 bits (147), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATS 41
           L+L+  N LIA E    GTI+   V+ RE+++R L  +A +
Sbjct: 62  LYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAA 102


>gi|30022542|ref|NP_834173.1| DNA repair protein radC [Bacillus cereus ATCC 14579]
 gi|229129746|ref|ZP_04258713.1| DNA repair protein radC [Bacillus cereus BDRD-Cer4]
 gi|29898100|gb|AAP11374.1| DNA repair protein radC [Bacillus cereus ATCC 14579]
 gi|228653662|gb|EEL09533.1| DNA repair protein radC [Bacillus cereus BDRD-Cer4]
          Length = 183

 Score = 60.8 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVH 46
           L+L+  N +I  +    G+++   V+ RE+ +     +A SIIL H
Sbjct: 129 LYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIILAH 174


>gi|70608422|gb|AAZ04486.1| DNA repair protein RadC [Acetobacter aceti]
          Length = 274

 Score = 60.5 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 18/105 (17%)

Query: 1   LFLDKHNILIADEV----QSRGTIDHVPVYIRE----IVQRCLELSATSIILVHNHPSGN 52
           LFLD  N LIADE         +       IR     ++QR L L A +++ V       
Sbjct: 166 LFLDSRNQLIADETVPAFLHEDSSHEAMACIRHAVAQVLQRALALHACALVTV----DLV 221

Query: 53  PNPSDADINMTQN------IITTLNPLNIIVHDHIIIGKDAFVSF 91
                 D ++TQN      +  +   L + VHDHI IG+  + SF
Sbjct: 222 AEDQTLDESLTQNAPFVRELQRSAPLLAVEVHDHIAIGRGEWRSF 266


>gi|296506505|ref|YP_003667739.1| DNA repair protein [Bacillus thuringiensis BMB171]
 gi|296327092|gb|ADH10019.1| DNA repair protein [Bacillus thuringiensis BMB171]
          Length = 60

 Score = 60.1 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 50 SGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          SG+   S  D+ +T+ +    N + I + DH+IIG + +VS     II
Sbjct: 13 SGHSAESHEDVEVTKRLKECGNIIGIPLLDHVIIGDNNYVSLMKKGII 60


>gi|294011283|ref|YP_003544743.1| DNA repair protein RadC [Sphingobium japonicum UT26S]
 gi|292674613|dbj|BAI96131.1| DNA repair protein RadC [Sphingobium japonicum UT26S]
          Length = 97

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 26 YIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGK 85
            R+ V   L   +  + +    P  +P P  ADI +T+ +   L P+ I + DH+I G+
Sbjct: 27 DWRDTVNALLRWESRWLAIEQQRPD-SPLPRWADIRLTRTLSKRLRPIEIALADHVIHGR 85

Query: 86 DAFVSFKGLRII 97
              SF+   ++
Sbjct: 86 KGRFSFRQAGLL 97


>gi|300814984|ref|ZP_07095211.1| DNA repair protein RadC family protein [Peptoniphilus sp. oral
          taxon 836 str. F0141]
 gi|300510905|gb|EFK38178.1| DNA repair protein RadC family protein [Peptoniphilus sp. oral
          taxon 836 str. F0141]
          Length = 55

 Score = 59.3 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 34/53 (64%)

Query: 23 VPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNI 75
            V+ RE+ ++ +   A SIIL+HNHP+G+P+PS  D N+T+ ++     + I
Sbjct: 2  TVVHPREVFRQAISDGAHSIILLHNHPTGDPSPSQEDRNLTRRLVEVSKIVGI 54


>gi|317129783|ref|YP_004096065.1| DNA repair protein RadC [Bacillus cellulosilyticus DSM 2522]
 gi|315474731|gb|ADU31334.1| DNA repair protein RadC [Bacillus cellulosilyticus DSM 2522]
          Length = 191

 Score = 58.9 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 24/46 (52%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVH 46
           L+L+  N ++  +    G+++   V+ RE+ +     SA SI+  H
Sbjct: 131 LYLNTKNHVMHKQTIFIGSLNASIVHPRELFKEAFRYSAASIVFAH 176


>gi|213019731|ref|ZP_03335536.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212994772|gb|EEB55415.1| putative dna repair protein radc [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 184

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 40/63 (63%), Gaps = 1/63 (1%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L+K   LI +E    G ++  PVYI+EI ++ L  +AT +I+ HNHP G+  PS+ D 
Sbjct: 123 LYLNKRRQLIGEES-YIGEMEKAPVYIKEITRKALIKNATLVIMSHNHPGGSLEPSEEDQ 181

Query: 61  NMT 63
            +T
Sbjct: 182 EVT 184


>gi|296506504|ref|YP_003667738.1| DNA repair protein [Bacillus thuringiensis BMB171]
 gi|296327091|gb|ADH10018.1| DNA repair protein [Bacillus thuringiensis BMB171]
          Length = 106

 Score = 58.5 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNH 48
           L+  N +I   +   GT+D   V+ RE  +  +  +A+SII  HNH
Sbjct: 56  LNTKNEIIGCSIVFEGTVDSSLVHPRETFRTAILNNASSIICFHNH 101


>gi|153006775|ref|YP_001381100.1| DNA repair protein RadC [Anaeromyxobacter sp. Fw109-5]
 gi|152030348|gb|ABS28116.1| DNA repair protein RadC [Anaeromyxobacter sp. Fw109-5]
          Length = 222

 Score = 57.4 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53
           + LD    L+     + G++   PV  R+ ++  +   A  ++ VHNHPSG  
Sbjct: 136 VLLDVRGRLLRAVQVAEGSLSQCPVSPRDALRPAVREGAHGVVFVHNHPSGVM 188


>gi|182414800|ref|YP_001819866.1| DNA repair protein RadC [Opitutus terrae PB90-1]
 gi|177842014|gb|ACB76266.1| DNA repair protein RadC [Opitutus terrae PB90-1]
          Length = 199

 Score = 57.4 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47
           L L++ N L+     + GT      + RE+ +  +  SA+++I  HN
Sbjct: 123 LCLNRKNRLLRRVEVTSGTATAALAHPREVFREAIRESASAVICAHN 169


>gi|330993526|ref|ZP_08317461.1| UPF0758 protein [Gluconacetobacter sp. SXCC-1]
 gi|329759556|gb|EGG76065.1| UPF0758 protein [Gluconacetobacter sp. SXCC-1]
          Length = 204

 Score = 57.4 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 5/94 (5%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNP--SDA 58
           ++LD    L+ADEV  +          R I+ R LEL A S+I + +  +  P P  S A
Sbjct: 109 IYLDSAGQLLADEVVPQ---AAAAEMCRAILARALELHAVSLITMRDTGAAVPPPQGSMA 165

Query: 59  DINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92
           D    + +      + + V D +I G    VS +
Sbjct: 166 DQRWGRMLYNHARLMGMDVQDCLIRGGGRTVSLR 199


>gi|163855806|ref|YP_001630104.1| putative DNA repair protein RadC [Bordetella petrii DSM 12804]
 gi|163259534|emb|CAP41835.1| putative DNA repair protein RadC [Bordetella petrii]
          Length = 148

 Score = 57.4 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 30/47 (63%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47
           +FLD  + ++A E   RGTI+   VY R +VQR LEL A +++L H 
Sbjct: 68  VFLDSMHQVLAYEPLFRGTINSTAVYPRVVVQRVLELKAAAVVLAHF 114


>gi|288551791|gb|ADC53387.1| hypothetical protein [Staphylococcus aureus]
 gi|329315332|gb|AEB89745.1| hypothetical protein SAT0131_02873 [Staphylococcus aureus subsp.
           aureus T0131]
          Length = 105

 Score = 57.0 bits (137), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 30/53 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53
           + ++  N     +  S G+I+   ++ REI +  +  +A SI+L HNHPSG+ 
Sbjct: 49  ICMNSKNEPTHIQTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDT 101


>gi|317499529|ref|ZP_07957793.1| DNA repair protein RadC [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893183|gb|EFV15401.1| DNA repair protein RadC [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 249

 Score = 57.0 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNP 55
           LD H ++    + S GT++      REI +  +  +A SIIL+HNHPSG+  P
Sbjct: 161 LDAHGVVQNANIVSMGTVNQTVSSPREIFKSAILSNAHSIILMHNHPSGSVKP 213


>gi|15923047|ref|NP_370581.1| hypothetical protein SAV0057 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15925760|ref|NP_373293.1| hypothetical protein SA0053 [Staphylococcus aureus subsp. aureus
           N315]
 gi|57865837|ref|YP_190047.1| RadC domain-containing protein [Staphylococcus epidermidis RP62A]
 gi|148266489|ref|YP_001245432.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH9]
 gi|150392522|ref|YP_001315197.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH1]
 gi|156978387|ref|YP_001440646.1| hypothetical protein SAHV_0056 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|254663985|ref|ZP_05143457.1| hypothetical protein SauraM_00265 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|295405332|ref|ZP_06815142.1| DNA repair protein RadC [Staphylococcus aureus A8819]
 gi|295426607|ref|ZP_06819246.1| RadC domain-containing protein [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297244669|ref|ZP_06928549.1| RadC domain-containing protein [Staphylococcus aureus A8796]
 gi|13699972|dbj|BAB41271.1| truncated(radC) [Staphylococcus aureus subsp. aureus N315]
 gi|14245824|dbj|BAB56219.1| truncated hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|57636495|gb|AAW53283.1| RadC domain protein [Staphylococcus epidermidis RP62A]
 gi|62815911|emb|CAH17564.1| hypothetical protein [Staphylococcus aureus]
 gi|70568187|dbj|BAE06284.1| truncated hypothetical protein [Staphylococcus aureus]
 gi|147739558|gb|ABQ47856.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH9]
 gi|149944974|gb|ABR50910.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus JH1]
 gi|156720522|dbj|BAF76939.1| truncated hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|195963184|emb|CAQ43009.1| hypothetical protein [Staphylococcus aureus]
 gi|221327666|gb|ACM17510.1| truncated radC DNA repair protein [Staphylococcus aureus]
 gi|238773854|dbj|BAH66417.1| hypothetical protein [Staphylococcus aureus]
 gi|285815782|gb|ADC36269.1| truncated DNA repair protein RadC [Staphylococcus aureus 04-02981]
 gi|294969407|gb|EFG45426.1| DNA repair protein RadC [Staphylococcus aureus A8819]
 gi|295129059|gb|EFG58686.1| RadC domain-containing protein [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297178186|gb|EFH37433.1| RadC domain-containing protein [Staphylococcus aureus A8796]
          Length = 105

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 30/52 (57%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52
           + ++  N     +  S G+I+   ++ REI +  +  +A SI+L HNHPSG+
Sbjct: 49  ICMNSKNEPTHIQTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD 100


>gi|304380749|ref|ZP_07363417.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC
          BAA-39]
 gi|304340686|gb|EFM06618.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC
          BAA-39]
          Length = 49

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 18/44 (40%)

Query: 53 PNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            PS  DI  T  +      L I + DHIIIG + F S      
Sbjct: 1  MTPSQEDIITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 44


>gi|14021044|dbj|BAB47668.1| hypothetical protein [Staphylococcus aureus]
 gi|27529893|dbj|BAC53830.1| hypothetical protein [Staphylococcus aureus]
          Length = 105

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 30/53 (56%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53
           + ++  N     +  S G+I+   ++ REI +  +  +A SI+L HNHPSG+ 
Sbjct: 49  ICMNSKNEPTHIQTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDI 101


>gi|304379984|ref|ZP_07362713.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|304341564|gb|EFM07474.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
          Length = 100

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 31/52 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52
           + ++  N     ++ S G+I+   ++ REI +  +  +A SI+L HNHPSG+
Sbjct: 49  ICMNSKNEPTHIQILSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD 100


>gi|221141077|ref|ZP_03565570.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus str.
          JKD6009]
 gi|258410975|ref|ZP_05681255.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257840125|gb|EEV64589.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|315129939|gb|EFT85929.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
          CGS03]
          Length = 47

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 55 PSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
          PS  DI  T  +      L I + DHIIIG + F S      
Sbjct: 1  PSQEDIITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 42


>gi|257794410|ref|ZP_05643389.1| DNA repair protein RadC [Staphylococcus aureus A9781]
 gi|258407627|ref|ZP_05680763.1| DNA repair protein RadC [Staphylococcus aureus A9763]
 gi|258419905|ref|ZP_05682867.1| DNA repair protein RadC [Staphylococcus aureus A9719]
 gi|258445162|ref|ZP_05693399.1| RadC domain-containing protein [Staphylococcus aureus A6300]
 gi|258447766|ref|ZP_05695905.1| RadC domain-containing protein [Staphylococcus aureus A6224]
 gi|258452204|ref|ZP_05700218.1| RadC domain-containing protein [Staphylococcus aureus A5948]
 gi|258455611|ref|ZP_05703566.1| DNA repair protein RadC [Staphylococcus aureus A5937]
 gi|282928311|ref|ZP_06335914.1| RadC domain-containing protein [Staphylococcus aureus A10102]
 gi|257788382|gb|EEV26722.1| DNA repair protein RadC [Staphylococcus aureus A9781]
 gi|257840852|gb|EEV65309.1| DNA repair protein RadC [Staphylococcus aureus A9763]
 gi|257844187|gb|EEV68574.1| DNA repair protein RadC [Staphylococcus aureus A9719]
 gi|257856070|gb|EEV78989.1| RadC domain-containing protein [Staphylococcus aureus A6300]
 gi|257859048|gb|EEV81912.1| RadC domain-containing protein [Staphylococcus aureus A6224]
 gi|257860041|gb|EEV82875.1| RadC domain-containing protein [Staphylococcus aureus A5948]
 gi|257861823|gb|EEV84596.1| DNA repair protein RadC [Staphylococcus aureus A5937]
 gi|282589895|gb|EFB94978.1| RadC domain-containing protein [Staphylococcus aureus A10102]
 gi|315129029|gb|EFT85025.1| hypothetical protein CGSSa03_13452 [Staphylococcus aureus subsp.
          aureus CGS03]
          Length = 99

 Score = 56.2 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 29/51 (56%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51
          + ++  N     +  S G+I+   ++ REI +  +  +A SI+L HNHPSG
Sbjct: 49 ICMNSKNEPTHIQTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSG 99


>gi|22094439|gb|AAM91899.1| unknown [Staphylococcus aureus]
          Length = 106

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 31/53 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53
           + ++  N     ++ S G+I+   ++ REI +  +  +A SI+L HNHPSG+ 
Sbjct: 49  ICMNSKNEPTHIQILSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDI 101


>gi|118464916|ref|YP_884148.1| DNA repair protein RadC [Mycobacterium avium 104]
 gi|118166203|gb|ABK67100.1| DNA repair protein RadC [Mycobacterium avium 104]
          Length = 66

 Score = 56.2 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 30/62 (48%)

Query: 27 IREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKD 86
          +REI+   L     +  + HNHPSG    SDAD  +T ++      + +    H+++  D
Sbjct: 1  MREILNAVLRHDGRAFAIAHNHPSGAAEASDADRQVTASVRAAATTVGLRFLGHVVVAND 60

Query: 87 AF 88
           +
Sbjct: 61 RW 62


>gi|57867122|ref|YP_188799.1| truncated DNA repair protein RadC [Staphylococcus epidermidis
           RP62A]
 gi|57637780|gb|AAW54568.1| truncated DNA repair protein RadC [Staphylococcus epidermidis
           RP62A]
          Length = 184

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 31/52 (59%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGN 52
           L L+  NI+       +GT++   ++ RE+    +  S+ SII+VHNHPSG+
Sbjct: 128 LLLNSKNIVTKQAWVYKGTLNSSIIHPREVFNIAIRESSNSIIVVHNHPSGD 179


>gi|13928286|dbj|BAB46978.1| hypothetical protein [Staphylococcus aureus]
          Length = 105

 Score = 55.8 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 31/53 (58%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNP 53
           + ++  N     ++ S G+I+   ++ REI +  +  +A SI+L HNHPSG+ 
Sbjct: 49  ICMNSKNEPTHIQILSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGDI 101


>gi|307293291|ref|ZP_07573137.1| DNA repair protein RadC [Sphingobium chlorophenolicum L-1]
 gi|306881357|gb|EFN12573.1| DNA repair protein RadC [Sphingobium chlorophenolicum L-1]
          Length = 101

 Score = 54.7 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 34  CLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKG 93
            L    +  + +    +G   P  ADI +T+ +   L P+ I + DH+I       SF+ 
Sbjct: 38  ALLRWDSRWLAIEQRRTGGLLPHWADIRLTRVLSKRLRPMEIGLADHVIHSGQGRFSFRE 97

Query: 94  LRII 97
             ++
Sbjct: 98  AGLL 101


>gi|309803315|ref|ZP_07697412.1| DNA repair protein RadC [Lactobacillus iners LactinV 11V1-d]
 gi|309804812|ref|ZP_07698876.1| DNA repair protein RadC [Lactobacillus iners LactinV 09V1-c]
 gi|309807743|ref|ZP_07701677.1| DNA repair protein RadC [Lactobacillus iners LactinV 01V1-a]
 gi|309809967|ref|ZP_07703815.1| DNA repair protein RadC [Lactobacillus iners SPIN 2503V10-D]
 gi|308164823|gb|EFO67073.1| DNA repair protein RadC [Lactobacillus iners LactinV 11V1-d]
 gi|308165922|gb|EFO68141.1| DNA repair protein RadC [Lactobacillus iners LactinV 09V1-c]
 gi|308169003|gb|EFO71087.1| DNA repair protein RadC [Lactobacillus iners LactinV 01V1-a]
 gi|308169755|gb|EFO71800.1| DNA repair protein RadC [Lactobacillus iners SPIN 2503V10-D]
          Length = 154

 Score = 54.7 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 27/45 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILV 45
           +++D  N +IA++V  +GT++   ++ R+I +  +  +A    LV
Sbjct: 109 VYVDVKNKIIAEKVIFKGTLNQAIIHPRDIFRWAIIYNAAGFFLV 153


>gi|325913010|ref|ZP_08175383.1| DNA repair protein RadC [Lactobacillus iners UPII 60-B]
 gi|325477690|gb|EGC80829.1| DNA repair protein RadC [Lactobacillus iners UPII 60-B]
          Length = 154

 Score = 54.3 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 27/45 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILV 45
           +++D  N +IA++V  +GT++   ++ R+I +  +  +A    LV
Sbjct: 109 VYVDVKNKIIAEKVIFKGTLNQAIIHPRDIFRWAIIYNAAGFFLV 153


>gi|167045168|gb|ABZ09829.1| putative RadC, DNA repair protein [uncultured marine microorganism
           HF4000_APKG8L7]
          Length = 195

 Score = 54.3 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/36 (61%), Positives = 27/36 (75%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLE 36
           LFLD  N +I DEVQ  GT++H PVY RE+V+R LE
Sbjct: 136 LFLDTKNKIIHDEVQQTGTVNHTPVYPREVVKRALE 171


>gi|23099509|ref|NP_692975.1| hypothetical protein OB2054 [Oceanobacillus iheyensis HTE831]
 gi|22777738|dbj|BAC14010.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 36

 Score = 54.3 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          MT+ ++ +   + I V DH+IIG   FVS K    +
Sbjct: 1  MTKRLVDSGKLIGIEVLDHLIIGDKKFVSLKEKGYL 36


>gi|258542142|ref|YP_003187575.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01]
 gi|256633220|dbj|BAH99195.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01]
 gi|256636279|dbj|BAI02248.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-03]
 gi|256639332|dbj|BAI05294.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-07]
 gi|256642388|dbj|BAI08343.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-22]
 gi|256645443|dbj|BAI11391.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-26]
 gi|256648496|dbj|BAI14437.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-32]
 gi|256651549|dbj|BAI17483.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654540|dbj|BAI20467.1| DNA repair protein RadC [Acetobacter pasteurianus IFO 3283-12]
          Length = 274

 Score = 53.9 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 10/101 (9%)

Query: 1   LFLDKHNILIADEV----QSRGTIDHVPVYIRE----IVQRCLELSATSIILVHNHPSGN 52
           LFLD  N LIADE        G        IR+    ++QR L L A +++ V       
Sbjct: 166 LFLDSRNQLIADEAVPAFLHEGRSHEAMASIRQAVALVLQRALALHACALVTVDLVAEDQ 225

Query: 53  PNPS--DADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
                   + +  + +  +   L + VH+HI IG   + SF
Sbjct: 226 TLDQTLAQNASFVRELQRSAPLLAVEVHEHIAIGCGEWRSF 266


>gi|257462804|ref|ZP_05627211.1| DNA primase TraC3 [Fusobacterium sp. D12]
          Length = 595

 Score = 53.9 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 24/43 (55%)

Query: 55 PSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          PS  DI +T++I +     N  + DH I+GK+   SF+   ++
Sbjct: 3  PSRKDIELTRDIESLCKKFNKELLDHTIVGKEDIFSFQREGML 45


>gi|94498573|ref|ZP_01305127.1| hypothetical protein SKA58_09973 [Sphingomonas sp. SKA58]
 gi|94421937|gb|EAT06984.1| hypothetical protein SKA58_09973 [Sphingomonas sp. SKA58]
          Length = 99

 Score = 53.9 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 28/49 (57%)

Query: 49 PSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          P    +P   DI +T+ II ++ PL++ V DH+I   D + SF+   ++
Sbjct: 51 PHQAASPGPDDITLTRAIIRSVRPLDLRVADHLIAAGDQWFSFRAAGLL 99


>gi|209542393|ref|YP_002274622.1| DNA repair protein RadC [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530070|gb|ACI50007.1| DNA repair protein RadC [Gluconacetobacter diazotrophicus PAl 5]
          Length = 244

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 15/106 (14%)

Query: 1   LFLDKHNILIADEVQS----RGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPS 56
           LFLD  N +IADE        G +D V    R I+ R L+L AT+ + +   P     P 
Sbjct: 145 LFLDSSNHIIADEALDAALDTGELDLVQ---RHILLRALDLHATAFVGIRIAP---VWPP 198

Query: 57  DA-----DINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            A     D  + Q I      L++ V DH+I+    ++S +  R +
Sbjct: 199 PATLVERDAVLMQAISYHAQNLSLTVQDHLILHHGQWLSLRQQRRL 244


>gi|162147771|ref|YP_001602232.1| putative DNA repair protein radC [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786348|emb|CAP55930.1| putative DNA repair protein radC [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 244

 Score = 53.5 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 15/106 (14%)

Query: 1   LFLDKHNILIADEVQS----RGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPS 56
           LFLD  N +IADE        G +D V    R I+ R L+L AT+ + +   P     P 
Sbjct: 145 LFLDSSNHIIADEALDAALDTGELDLVQ---RHILLRALDLHATAFVGIRIAP---VWPP 198

Query: 57  DA-----DINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
            A     D  + Q I      L++ V DH+I+    ++S +  R +
Sbjct: 199 PAALVERDAVLMQAISYHAQNLSLTVQDHLILHHGQWLSLRQQRRL 244


>gi|182416193|ref|YP_001821259.1| DNA repair protein RadC [Opitutus terrae PB90-1]
 gi|177843407|gb|ACB77659.1| DNA repair protein RadC [Opitutus terrae PB90-1]
          Length = 137

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 26/47 (55%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47
           ++LD+ N  +   + + GT+D   V  RE+ +  +    +++++ HN
Sbjct: 61  VYLDRKNHPLGRHLITLGTVDSTLVSCREVFRGAIVAGCSALVVAHN 107


>gi|301063337|ref|ZP_07203876.1| DNA repair protein [delta proteobacterium NaphS2]
 gi|300442500|gb|EFK06726.1| DNA repair protein [delta proteobacterium NaphS2]
          Length = 2393

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 2/82 (2%)

Query: 8    ILIADEVQSRGTIDHVPVYIREIVQRCLELS-ATSIILVHNHPSGNPNPSDADINMTQNI 66
             ++     ++GT+          + R      A ++ L HNHPSG P PS  D N T+ +
Sbjct: 1012 KILEIHRVTKGTVSSTLAPTVSTMGRVFNTPGAHTVYLAHNHPSGEPRPSPQDENFTKEM 1071

Query: 67   ITTLNPLNIIVHDHIIIGKDAF 88
                   NI V   +++G+ ++
Sbjct: 1072 RAAGVLKNIDVR-SLVLGEKSW 1092


>gi|255017821|ref|ZP_05289947.1| DNA repair protein RadC [Listeria monocytogenes FSL F2-515]
          Length = 65

 Score = 52.4 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 63 TQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
           + +    N + I + DHIIIGK+ ++S K    
Sbjct: 31 YKRLAEAGNIVGITLLDHIIIGKNKYISLKEKGY 64


>gi|295397907|ref|ZP_06807967.1| DNA repair protein RadC [Aerococcus viridans ATCC 11563]
 gi|294973848|gb|EFG49615.1| DNA repair protein RadC [Aerococcus viridans ATCC 11563]
          Length = 40

 Score = 52.0 bits (124), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 20/36 (55%)

Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           T  ++   + L I + DH I+ +  ++SFK + ++
Sbjct: 5  FTHRMMEAGDVLGIELLDHFIVSEKNWLSFKEIGLL 40


>gi|282167039|gb|ADA81055.1| DNA repair protein RadC [Staphylococcus aureus]
          Length = 114

 Score = 50.8 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPS 50
           L+  N +        GT+D   ++ R+  Q  +  +  S+I  HNHPS
Sbjct: 54  LNTKNEVTTLYTVHIGTLDMSIIHPRDSFQVAILNNCKSVIFAHNHPS 101


>gi|94310187|ref|YP_583397.1| RadC family protein [Cupriavidus metallidurans CH34]
          Length = 36

 Score = 50.8 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          MT  +   L  +++   DHIII      SF    ++
Sbjct: 1  MTSQLRQALALVDVRTLDHIIIAGSRTTSFAERGLL 36


>gi|227885220|ref|ZP_04003025.1| conserved hypothetical protein [Escherichia coli 83972]
 gi|227837809|gb|EEJ48275.1| conserved hypothetical protein [Escherichia coli 83972]
          Length = 33

 Score = 50.4 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 65 NIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
           ++  L  ++I V DH+I+G     SF    ++
Sbjct: 1  RLVQALALVDIRVPDHLIVGGSQVFSFAEHGLL 33


>gi|330503727|ref|YP_004380596.1| RadC-like protein [Pseudomonas mendocina NK-01]
 gi|328918013|gb|AEB58844.1| RadC-like protein [Pseudomonas mendocina NK-01]
          Length = 137

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/33 (51%), Positives = 20/33 (60%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQR 33
           LFLD  + LI      RGTID   VY RE+V+R
Sbjct: 72  LFLDAKHNLIQYVEMFRGTIDSASVYPREMVKR 104


>gi|301327411|ref|ZP_07220656.1| conserved domain protein [Escherichia coli MS 78-1]
 gi|300846004|gb|EFK73764.1| conserved domain protein [Escherichia coli MS 78-1]
          Length = 38

 Score = 50.4 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 24/38 (63%)

Query: 7  NILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIIL 44
          N LIA E    GTI+   V+ RE+++R L  +A +++L
Sbjct: 1  NQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVL 38


>gi|58584431|ref|YP_198004.1| RadC-like DNA repair protein [Wolbachia endosymbiont strain TRS
          of Brugia malayi]
 gi|58418747|gb|AAW70762.1| RadC-like DNA repair protein [Wolbachia endosymbiont strain TRS
          of Brugia malayi]
          Length = 84

 Score = 50.1 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 40/57 (70%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSD 57
          ++ +K   LIA+++Q+  TID   +Y+++I++R L + +TSI++ HNH SGN  PS 
Sbjct: 20 IYTNKKYHLIAEDLQNISTIDQTSLYVKDIIKRVLLIGSTSIVISHNHSSGNTQPSS 76


>gi|163856483|ref|YP_001630781.1| DNA repair protein radC-like protein [Bordetella petrii DSM 12804]
 gi|163260211|emb|CAP42513.1| DNA repair protein radC homolog [Bordetella petrii]
          Length = 132

 Score = 50.1 bits (119), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQR 33
           LFLD  + LI       GTID   V+ RE+V R
Sbjct: 72  LFLDTRHRLIDYVEMFHGTIDSAEVHPREVVNR 104


>gi|227552772|ref|ZP_03982821.1| DNA repair protein C [Enterococcus faecium TX1330]
 gi|257897308|ref|ZP_05676961.1| DNA repair protein RadC [Enterococcus faecium Com12]
 gi|227178096|gb|EEI59068.1| DNA repair protein C [Enterococcus faecium TX1330]
 gi|257833873|gb|EEV60294.1| DNA repair protein RadC [Enterococcus faecium Com12]
          Length = 95

 Score = 50.1 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 25/46 (54%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVH 46
          + L+  N ++A      G+++   V+ RE+ +  +  +A S+I+ H
Sbjct: 50 MCLNTKNNVVAVHRCHAGSLNASLVHPREVFKSAILNNAASVIVAH 95


>gi|291548120|emb|CBL21228.1| DNA repair proteins [Ruminococcus sp. SR1/5]
          Length = 50

 Score = 49.7 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 62 MTQNIITTLNPLNIIVHDHIIIGK--DAFVSFKGLRII 97
          +T+ +      L I + DHII+G      +SF+  +++
Sbjct: 3  VTRKLQKCGQLLGIELLDHIIVGGTNGKMLSFREEKML 40


>gi|229085377|ref|ZP_04217618.1| hypothetical DNA repair protein [Bacillus cereus Rock3-44]
 gi|228697853|gb|EEL50597.1| hypothetical DNA repair protein [Bacillus cereus Rock3-44]
          Length = 126

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVH 46
           L LD  N   A  V   G+++   V+ RE+++  +  +A SII+ H
Sbjct: 72  LCLDIKNQPTAINVCHIGSLNSSIVHPREVLKPAIISNAASIIVFH 117


>gi|83311132|ref|YP_421396.1| hypothetical protein amb2033 [Magnetospirillum magneticum AMB-1]
 gi|82945973|dbj|BAE50837.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
          Length = 36

 Score = 49.3 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 23/36 (63%)

Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          MT+++   L  + I VHDH+++G+    SFK + ++
Sbjct: 1  MTRSVKEALAAVGIAVHDHVVVGRKGHASFKAMGLL 36


>gi|300919528|ref|ZP_07136026.1| DNA repair protein [Escherichia coli MS 115-1]
 gi|300413422|gb|EFJ96732.1| DNA repair protein [Escherichia coli MS 115-1]
          Length = 102

 Score = 48.9 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREI 30
          L+LD  N LIA E    GTI+   V+ RE+
Sbjct: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREV 91


>gi|167957186|ref|ZP_02544260.1| hypothetical protein cdiviTM7_00840 [candidate division TM7
          single-cell isolate TM7c]
          Length = 38

 Score = 48.9 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 56 SDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
          S AD ++T  +      L I ++DHIII K  ++S
Sbjct: 2  SQADKDVTSRLAEAGKLLGITLNDHIIITKSEYIS 36


>gi|257464463|ref|ZP_05628835.1| DNA repair protein RadC [Fusobacterium sp. D12]
 gi|317061951|ref|ZP_07926436.1| conserved hypothetical protein [Fusobacterium sp. D12]
 gi|313687627|gb|EFS24462.1| conserved hypothetical protein [Fusobacterium sp. D12]
          Length = 226

 Score = 48.5 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 29/48 (60%)

Query: 4   DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG 51
           DK+N +   E   +GT++  PV ++ ++   L+ +   I ++HNHPSG
Sbjct: 171 DKNNKITNYETLFKGTVNSAPVDLKVLIPYLLDENIKGIQILHNHPSG 218


>gi|312143656|ref|YP_003995102.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus']
 gi|311904307|gb|ADQ14748.1| DNA repair protein RadC [Halanaerobium sp. 'sapolanicus']
          Length = 821

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 10/77 (12%)

Query: 3  LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
          L+  NI+ + EV +RG     P  I  I+           +++HNHPSG+  PS ADI +
Sbjct: 33 LNDKNIIDSFEVLARGNSYSAPAVINNIM--------AGEMIIHNHPSGDLTPSAADIRL 84

Query: 63 TQNIITTLNPLNIIVHD 79
             +      +   + D
Sbjct: 85 ASKM--AAREVGFAIID 99


>gi|307290817|ref|ZP_07570711.1| hypothetical protein HMPREF9509_01116 [Enterococcus faecalis
          TX0411]
 gi|306498126|gb|EFM67649.1| hypothetical protein HMPREF9509_01116 [Enterococcus faecalis
          TX0411]
 gi|315145410|gb|EFT89426.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
          Length = 35

 Score = 48.1 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 14/31 (45%)

Query: 66 IITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
          +      + I + DHII+G   ++S +    
Sbjct: 1  MEECGEMMGIQLLDHIIVGDSGYISLREENF 31


>gi|331681615|ref|ZP_08382250.1| intergenic-region protein [Escherichia coli H299]
 gi|331081157|gb|EGI52320.1| intergenic-region protein [Escherichia coli H299]
          Length = 96

 Score = 47.4 bits (112), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIREI 30
          L+L+  N LIA E    GTI+   V+ RE+
Sbjct: 67 LYLNNQNQLIAGETLFTGTINRTEVHPREV 96


>gi|206602587|gb|EDZ39068.1| DNA repair protein (RadC) [Leptospirillum sp. Group II '5-way CG']
          Length = 143

 Score = 47.0 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 5   KHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47
           + +  I     S GT+    V+ RE     +  SA ++I +HN
Sbjct: 101 QRHQPIDLHKISEGTLSMTLVHPREAFSPAIRDSAAAVIFLHN 143


>gi|172037406|ref|YP_001803907.1| hypothetical protein cce_2493 [Cyanothece sp. ATCC 51142]
 gi|171698860|gb|ACB51841.1| hypothetical protein cce_2493 [Cyanothece sp. ATCC 51142]
          Length = 61

 Score = 46.2 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 23/39 (58%)

Query: 53 PNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSF 91
          P PS  D+++T+ ++  +  + I + DH+I+G+    S 
Sbjct: 10 PEPSQQDLDLTEQLLKGMQLIRIPLIDHLILGEGNHCSL 48


>gi|11356416|pir||T44106 hypothetical protein [imported] - Staphylococcus aureus
          (fragment)
          Length = 193

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 52 NPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
          +  PS  DI +TQ I      + II++DHII  ++   S
Sbjct: 1  DITPSPGDIKITQRIKEISEMMGIILYDHIIFSENDHHS 39


>gi|218660004|ref|ZP_03515934.1| DNA repair protein RadC [Rhizobium etli IE4771]
          Length = 54

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/46 (47%), Positives = 28/46 (60%)

Query: 44 LVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFV 89
          +  N       PS ADI+MT+ II  +  L+IIVHD IIIGK+  V
Sbjct: 8  IPRNTSPAQEKPSRADIDMTKLIIDAVKALDIIVHDQIIIGKNGHV 53


>gi|320640296|gb|EFX09863.1| DNA repair protein, RadC family [Escherichia coli O157:H7 str.
          G5101]
          Length = 88

 Score = 45.0 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYI 27
          L+L+  N LIA E    GTI+   V+ 
Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVHP 88


>gi|152976869|ref|YP_001376386.1| DNA repair protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152025621|gb|ABS23391.1| DNA repair protein [Bacillus cytotoxicus NVH 391-98]
          Length = 32

 Score = 44.7 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 66 IITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          ++     + I V DHIIIG   FVS +    I
Sbjct: 1  MVECGKIIGIEVLDHIIIGDHKFVSLREKGHI 32


>gi|218705500|ref|YP_002413019.1| hypothetical protein ECUMN_2302 [Escherichia coli UMN026]
 gi|218432597|emb|CAR13491.1| hypothetical protein ECUMN_2302 [Escherichia coli UMN026]
          Length = 77

 Score = 44.7 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 35 LELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHI 81
          + ++  ++IL +NHPSG   PS A   M   I   L  +++    H 
Sbjct: 1  MGVNTAAVILANNHPSGISEPSHAGKVMRVQIKKGLGIVDMRTLAHF 47


>gi|196044733|ref|ZP_03111967.1| DNA repair protein [Bacillus cereus 03BB108]
 gi|196024221|gb|EDX62894.1| DNA repair protein [Bacillus cereus 03BB108]
          Length = 40

 Score = 44.7 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 46 HNHPSGNPNPSDADINMTQNIITTLNPLNIIVH 78
          H HPSG+P PS  DI +T+ ++     + I + 
Sbjct: 6  HFHPSGDPAPSREDIEVTKRLVECGRIIGIELI 38


>gi|148268134|ref|YP_001247077.1| hypothetical protein SaurJH9_1711 [Staphylococcus aureus subsp.
          aureus JH9]
 gi|258420224|ref|ZP_05683179.1| predicted protein [Staphylococcus aureus A9719]
 gi|258446896|ref|ZP_05695050.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|147741203|gb|ABQ49501.1| hypothetical protein SaurJH9_1711 [Staphylococcus aureus subsp.
          aureus JH9]
 gi|257843935|gb|EEV68329.1| predicted protein [Staphylococcus aureus A9719]
 gi|257854471|gb|EEV77420.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|285817336|gb|ADC37823.1| DNA repair protein RadC [Staphylococcus aureus 04-02981]
 gi|302751480|gb|ADL65657.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus str.
          JKD6008]
 gi|329314326|gb|AEB88739.1| DNA repair protein RadC [Staphylococcus aureus subsp. aureus
          T0131]
 gi|329727320|gb|EGG63776.1| hypothetical protein SA21172_0510 [Staphylococcus aureus subsp.
          aureus 21172]
          Length = 38

 Score = 44.7 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 13/33 (39%)

Query: 64 QNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRI 96
            +      L I + DHIIIG + F S      
Sbjct: 1  MRLKECGLILGIDLLDHIIIGDNRFTSLVEAGY 33


>gi|325273177|ref|ZP_08139467.1| hypothetical protein G1E_09237 [Pseudomonas sp. TJI-51]
 gi|324101684|gb|EGB99240.1| hypothetical protein G1E_09237 [Pseudomonas sp. TJI-51]
          Length = 40

 Score = 43.9 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 61 NMTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          ++T ++   L  +++ V DHIIIG    +S      I
Sbjct: 2  HLTLSLKRGLALIDVRVLDHIIIGDGEPLSMVEQGWI 38


>gi|299132797|ref|ZP_07025992.1| conserved hypothetical protein [Afipia sp. 1NLS2]
 gi|298592934|gb|EFI53134.1| conserved hypothetical protein [Afipia sp. 1NLS2]
          Length = 36

 Score = 43.9 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/36 (47%), Positives = 26/36 (72%)

Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          MT++I+    PL I VHDHII+GK+   S KG++++
Sbjct: 1  MTKSIVAIAAPLGISVHDHIIVGKNGHSSLKGMKLM 36


>gi|309389240|gb|ADO77120.1| DNA repair protein RadC [Halanaerobium praevalens DSM 2228]
          Length = 816

 Score = 43.5 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 10/76 (13%)

Query: 3  LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
          L+   I+   EV +RG     P          L       +++HNHPSG+  PS ADI++
Sbjct: 33 LNNKKIIKEIEVLARGNSYSAPA--------VLNDLMAGEMIIHNHPSGDLTPSAADISL 84

Query: 63 TQNIITTLNPLNIIVH 78
             +      +   + 
Sbjct: 85 AAKM--AAREVGFAII 98


>gi|320657673|gb|EFX25468.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
          O55:H7 str. 3256-97 TW 07815]
 gi|320663354|gb|EFX30656.1| putative DNA repair protein; CP4-44 prophage [Escherichia coli
          O55:H7 str. USDA 5905]
          Length = 87

 Score = 43.1 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVY 26
          L+L+  N LIA E    GTI+   V+
Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTEVH 87


>gi|317053594|ref|YP_004118728.1| DNA repair protein RadC [Pantoea sp. At-9b]
 gi|316952699|gb|ADU72172.1| DNA repair protein RadC [Pantoea sp. At-9b]
          Length = 143

 Score = 42.7 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 2  FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47
          FL+  + L A E   +G I  V +   ++V R L+L+A  + + HN
Sbjct: 52 FLNNQHQLFAYEEMFQGIISSVGI-PPDVVYRTLQLNAAVVTVTHN 96


>gi|237732874|ref|ZP_04563355.1| predicted protein [Mollicutes bacterium D7]
 gi|229384027|gb|EEO34118.1| predicted protein [Coprobacillus sp. D7]
          Length = 237

 Score = 42.0 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 3/89 (3%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHP-SGNPNPSDADIN 61
           L+    +I       GT   V + I++I +  ++       +VHNHP S   N ++ DI 
Sbjct: 109 LNNE-QVIDIHK-FVGTECSVGISIQDIFKYLIKKGINKYAIVHNHPNSIVANFTEDDIK 166

Query: 62  MTQNIITTLNPLNIIVHDHIIIGKDAFVS 90
               +    N   +   D  +I      S
Sbjct: 167 NNYILGFYSNTFGLEFIDSFVITPFDCES 195


>gi|154482369|ref|ZP_02024817.1| hypothetical protein EUBVEN_00014 [Eubacterium ventriosum ATCC
          27560]
 gi|149736786|gb|EDM52672.1| hypothetical protein EUBVEN_00014 [Eubacterium ventriosum ATCC
          27560]
          Length = 61

 Score = 41.6 bits (97), Expect = 0.033,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 71 NPLNIIVHDHIIIG--KDAFVSFKGLRII 97
          N + I + DHII+G  K  + S +  +++
Sbjct: 1  NLVGIPLLDHIIVGPDKGRYFSLRDKQLV 29


>gi|120435705|ref|YP_861391.1| RadC-like DNA repair protein [Gramella forsetii KT0803]
 gi|117577855|emb|CAL66324.1| RadC-like DNA repair protein [Gramella forsetii KT0803]
          Length = 117

 Score = 41.2 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47
           + L+  N +      S G I    V +R +    L+  + S+IL H 
Sbjct: 69  VLLNNANKVKGIFEVSTGGITGTLVDLRILFAVILKSLSCSVILAHY 115


>gi|320656435|gb|EFX24339.1| DNA repair protein, RadC family [Escherichia coli O55:H7 str.
          3256-97 TW 07815]
          Length = 90

 Score = 40.8 bits (95), Expect = 0.061,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVYIR 28
          L+L+  N LIA E    GTI+       
Sbjct: 62 LYLNNQNQLIAGETLFTGTINRTESIPG 89


>gi|149280010|ref|ZP_01886135.1| bifunctional protein: riboflavin kinase; FAD synthetase
          [Pedobacter sp. BAL39]
 gi|149229207|gb|EDM34601.1| bifunctional protein: riboflavin kinase; FAD synthetase
          [Pedobacter sp. BAL39]
          Length = 311

 Score = 40.8 bits (95), Expect = 0.063,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 10 IADEVQSRGTIDHVPVYIREIVQRCLELSATS-----IILVHNHPSGNPNPSDADINMTQ 64
          +   V + GT D V    ++I++R  EL+  S     I+    HP    +P + D+ +  
Sbjct: 13 LDHAVVTIGTFDGVHFGHQKIIKRLCELAKASNGESVILTFFPHPRMIIDPENQDLKLIN 72

Query: 65 NIITTLNPLNIIVHDHIIIG 84
           I    + L  +  DH+II 
Sbjct: 73 TIAEKASILEGLGVDHLIIT 92


>gi|268610724|ref|ZP_06144451.1| DNA repair protein RadC [Ruminococcus flavefaciens FD-1]
          Length = 229

 Score = 40.4 bits (94), Expect = 0.079,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 5/84 (5%)

Query: 12  DEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLN 71
            +    G+I    +    I++R        I++    P G   PS  +  +T  +     
Sbjct: 145 YKDVLHGSIGQRDLAELLIMRRAYR-----IVIGIFQPDGCGFPSPDNFAVTHAVSEISA 199

Query: 72  PLNIIVHDHIIIGKDAFVSFKGLR 95
            + + + D ++  K +  S +   
Sbjct: 200 AIGVELVDSVVCCKSSAYSMRSSG 223


>gi|189426665|ref|YP_001953842.1| helicase c2 [Geobacter lovleyi SZ]
 gi|189422924|gb|ACD97322.1| helicase c2 [Geobacter lovleyi SZ]
          Length = 838

 Score = 40.0 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)

Query: 2  FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           LD + ++++ E  +RG    VP     I+ R     +   +++HNHPSG   PSDAD++
Sbjct: 30 CLDDNGVMVSAEAIARGNKHAVPA----ILSRA----SAGQMVLHNHPSGELIPSDADLD 81

Query: 62 MTQNIITTLNPLNI 75
          +            I
Sbjct: 82 LASICGNNGIGFGI 95


>gi|120435583|ref|YP_861269.1| RadC-like DNA repair protein [Gramella forsetii KT0803]
 gi|117577733|emb|CAL66202.1| RadC-like DNA repair protein [Gramella forsetii KT0803]
          Length = 118

 Score = 39.7 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHN 47
           + L+  N +        G I    V +R +    L+  + ++I+ H 
Sbjct: 70  MLLNNGNKVKGIFEVFTGGITGTLVDLRILFAVVLKSLSVNLIIAHY 116


>gi|222053722|ref|YP_002536084.1| helicase c2 [Geobacter sp. FRC-32]
 gi|221563011|gb|ACM18983.1| helicase c2 [Geobacter sp. FRC-32]
          Length = 835

 Score = 39.3 bits (91), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 10/76 (13%)

Query: 4  DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
          D+  ++I  E  +RG +D V           + +++   +++HNHPSG   PS ADI + 
Sbjct: 32 DEAKVVIDAEPLARGNVDAVAAI--------MIVTSFGDVVIHNHPSGILTPSQADIEIA 83

Query: 64 QNIITTLNPLNIIVHD 79
            +      +   + D
Sbjct: 84 SLMGN--QGVGFYIVD 97


>gi|328949537|ref|YP_004366873.1| SNF2-related protein [Treponema succinifaciens DSM 2489]
 gi|328449861|gb|AEB15576.1| SNF2-related protein [Treponema succinifaciens DSM 2489]
          Length = 2135

 Score = 39.3 bits (91), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 13/101 (12%)

Query: 1    LFLDKHNILIADEV-QSRGTIDHVPVY------IREIVQRCLELSATSIILVHNHPSGNP 53
            + +D+HN  I D++  S    +   +       +++++ R  E     ++ VHNHPSGN 
Sbjct: 1866 VLIDRHNGEIRDQIAVSSHMPNTTIISDPNNQTLKQVISRAEEKDCL-VVAVHNHPSGNT 1924

Query: 54   NPSDADINMTQNIITTLNPLNI--IVHDHIIIGKDAFVSFK 92
             PSD DI  T+ +  ++   +       HII+      SF 
Sbjct: 1925 RPSDYDIKSTKALEESMKRKDGFNRFAGHIIL---DHDSFA 1962


>gi|229133317|ref|ZP_04262146.1| DNA repair protein [Bacillus cereus BDRD-ST196]
 gi|228650133|gb|EEL06139.1| DNA repair protein [Bacillus cereus BDRD-ST196]
          Length = 84

 Score = 39.3 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 3  LDKHNILIADEVQSRGTIDHVPVYIREIV 31
          L+  N +I   +   GT+D   V+ R +V
Sbjct: 56 LNTKNEIIGCSIVFEGTVDSSLVHPRAMV 84


>gi|330830833|ref|YP_004393785.1| putative DNA repair protein RadC [Aeromonas veronii B565]
 gi|328805969|gb|AEB51168.1| Putative DNA repair protein RadC [Aeromonas veronii B565]
          Length = 93

 Score = 38.9 bits (90), Expect = 0.21,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPV 25
          LFLD  + ++A E    GT+    V
Sbjct: 69 LFLDNQHRILAYEELFLGTLSAATV 93


>gi|260888102|ref|ZP_05899365.1| GTP-binding protein [Selenomonas sputigena ATCC 35185]
 gi|260862131|gb|EEX76631.1| GTP-binding protein [Selenomonas sputigena ATCC 35185]
          Length = 664

 Score = 37.7 bits (87), Expect = 0.48,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 7/75 (9%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +++D+   +I   V +  T+D   V  R  V+       + +  +H HPSG+   SD DI
Sbjct: 73  VYVDRKGRIIEISVGNTWTVDLPAVDARSEVRL------SGVRCIHTHPSGDTELSDPDI 126

Query: 61  NMTQNII-TTLNPLN 74
           +  + +    +  + 
Sbjct: 127 SSLRRLRFDAMAAIG 141


>gi|330839979|ref|YP_004414559.1| GTP-binding proten HflX [Selenomonas sputigena ATCC 35185]
 gi|329747743|gb|AEC01100.1| GTP-binding proten HflX [Selenomonas sputigena ATCC 35185]
          Length = 647

 Score = 37.7 bits (87), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 7/75 (9%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           +++D+   +I   V +  T+D   V  R  V+       + +  +H HPSG+   SD DI
Sbjct: 56  VYVDRKGRIIEISVGNTWTVDLPAVDARSEVRL------SGVRCIHTHPSGDTELSDPDI 109

Query: 61  NMTQNII-TTLNPLN 74
           +  + +    +  + 
Sbjct: 110 SSLRRLRFDAMAAIG 124


>gi|253702440|ref|YP_003023629.1| helicase c2 [Geobacter sp. M21]
 gi|251777290|gb|ACT19871.1| helicase c2 [Geobacter sp. M21]
          Length = 830

 Score = 37.3 bits (86), Expect = 0.66,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 10/76 (13%)

Query: 4  DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
          D+  I++  E  +RG  D VP          +   +   +++HNHPSGN  PS  DI + 
Sbjct: 32 DEARIVVEVEPLARGNRDAVPAI--------MIACSFGDVVIHNHPSGNLTPSQPDIEIA 83

Query: 64 QNIITTLNPLNIIVHD 79
            +      +   + D
Sbjct: 84 SLLGN--QGVGFYIVD 97


>gi|255006439|ref|ZP_05145040.2| hypothetical protein SauraM_08220 [Staphylococcus aureus subsp.
          aureus Mu50-omega]
 gi|295406775|ref|ZP_06816580.1| conserved hypothetical protein [Staphylococcus aureus A8819]
 gi|297245642|ref|ZP_06929507.1| conserved hypothetical protein [Staphylococcus aureus A8796]
 gi|294968522|gb|EFG44546.1| conserved hypothetical protein [Staphylococcus aureus A8819]
 gi|297177293|gb|EFH36545.1| conserved hypothetical protein [Staphylococcus aureus A8796]
 gi|315195557|gb|EFU25944.1| hypothetical protein CGSSa00_07820 [Staphylococcus aureus subsp.
          aureus CGS00]
          Length = 31

 Score = 37.3 bits (86), Expect = 0.68,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 72 PLNIIVHDHIIIGKDAFVSFKGLRI 96
           L I + DHIIIG + F S      
Sbjct: 2  ILGIDLLDHIIIGDNRFTSLVEAGY 26


>gi|77917641|ref|YP_355456.1| Rad3-related DNA helicases [Pelobacter carbinolicus DSM 2380]
 gi|77543724|gb|ABA87286.1| Rad3-related DNA helicase [Pelobacter carbinolicus DSM 2380]
          Length = 851

 Score = 37.3 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 8/63 (12%)

Query: 4  DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
          D    ++  +V +RG    VP  ++E  +          +++HNHPS    PS AD+ + 
Sbjct: 32 DADLRVVQVQVLARGNGSAVPAIVQEC-RY-------GDVVIHNHPSACLEPSMADLEIA 83

Query: 64 QNI 66
            +
Sbjct: 84 SRL 86


>gi|78224358|ref|YP_386105.1| helicase c2 [Geobacter metallireducens GS-15]
 gi|78195613|gb|ABB33380.1| Helicase c2 [Geobacter metallireducens GS-15]
          Length = 876

 Score = 37.3 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 15/76 (19%)

Query: 7   NILIAD-EVQSRGTIDHVPVYIREIVQRCLELSATSI--ILVHNHPSGNPNPSDADINMT 63
           N ++ + E  +RG  D V             + ATS   +++HNHPSGN +PS ADI + 
Sbjct: 71  NRIVTEAEPLARGNRDAV----------AAIMIATSFGDVVIHNHPSGNLDPSQADIEIA 120

Query: 64  QNIITTLNPLNIIVHD 79
             +      +   + D
Sbjct: 121 SLLGN--QGVGFSIVD 134


>gi|259157198|gb|ACV96810.1| RadC [uncultured bacterium]
          Length = 35

 Score = 37.0 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 24/35 (68%)

Query: 9  LIADEVQSRGTIDHVPVYIREIVQRCLELSATSII 43
          +I       GT++HV V+ REI++  ++++A+++I
Sbjct: 1  IITHRRLFSGTLNHVEVHPREIIREAIKINASALI 35


>gi|197120131|ref|YP_002140558.1| ATP-dependent DNA helicase DinG [Geobacter bemidjiensis Bem]
 gi|197089491|gb|ACH40762.1| ATP-dependent DNA helicase DinG [Geobacter bemidjiensis Bem]
          Length = 830

 Score = 36.6 bits (84), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 8/63 (12%)

Query: 4  DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
          D+  I++  E  +RG  D VP          +   +   +++HNHPSGN  PS  DI + 
Sbjct: 32 DEARIVVEVEPLARGNRDAVPAI--------MIACSFGDVVIHNHPSGNLTPSQPDIEIA 83

Query: 64 QNI 66
            +
Sbjct: 84 SLL 86


>gi|327484363|gb|AEA78770.1| DNA repair protein RadC [Vibrio cholerae LMA3894-4]
          Length = 44

 Score = 36.6 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 21/30 (70%)

Query: 24 PVYIREIVQRCLELSATSIILVHNHPSGNP 53
          PV  +E ++  L ++A ++I  HNHPSG+P
Sbjct: 3  PVSTQERLKEALNVNAAAVIFAHNHPSGDP 32


>gi|220931636|ref|YP_002508544.1| helicase c2 [Halothermothrix orenii H 168]
 gi|219992946|gb|ACL69549.1| helicase c2 [Halothermothrix orenii H 168]
          Length = 822

 Score = 36.6 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 10/72 (13%)

Query: 8   ILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNII 67
            ++   + +RG +  VP  I ++            ++VHNHPS +  PS ADI +   + 
Sbjct: 39  KIMDYTLLARGNLKMVPAIISDL--------KPGQVIVHNHPSSDLTPSAADIRIASRMG 90

Query: 68  TTLNPLNIIVHD 79
                +  I+ D
Sbjct: 91  N--QGIGFIIID 100


>gi|111019688|ref|YP_702660.1| enoyl-CoA hydratase [Rhodococcus jostii RHA1]
 gi|110819218|gb|ABG94502.1| possible enoyl-CoA hydratase [Rhodococcus jostii RHA1]
          Length = 270

 Score = 36.2 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 3/54 (5%)

Query: 44  LVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKD---AFVSFKGL 94
           +    P        AD+ ++  ++     L I + DH+I+  +   A VS+   
Sbjct: 143 ISWLLPRLVGRSRAADLLLSSRMVDAEEALRIGLVDHLIVDGNVLAAAVSYAQQ 196


>gi|169836601|ref|ZP_02869789.1| hypothetical protein cdivTM_05775 [candidate division TM7
          single-cell isolate TM7a]
          Length = 36

 Score = 36.2 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 1  LFLDKHNILIADEVQSRGTIDHVPVY 26
          +FL+  N L+ +E    GT     +Y
Sbjct: 1  MFLNTQNELLKEEELFFGTRTEARLY 26


>gi|322421670|ref|YP_004200893.1| helicase c2 [Geobacter sp. M18]
 gi|320128057|gb|ADW15617.1| helicase c2 [Geobacter sp. M18]
          Length = 833

 Score = 35.8 bits (82), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 8/63 (12%)

Query: 4  DKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMT 63
          D+  +++  E  +RG  D VP          +   +   +++HNHPSG   PS  DI + 
Sbjct: 32 DEARVVVEVEPLARGNKDAVPAI--------MIACSFGDVVIHNHPSGYLTPSQPDIEIA 83

Query: 64 QNI 66
            +
Sbjct: 84 SLL 86


>gi|148266132|ref|YP_001232838.1| helicase c2 [Geobacter uraniireducens Rf4]
 gi|146399632|gb|ABQ28265.1| helicase c2 [Geobacter uraniireducens Rf4]
          Length = 843

 Score = 35.8 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 12/72 (16%)

Query: 9  LIADEVQSRGTIDHVPVYIREIVQRCLELSAT-SIILVHNHPSGNPNPSDADINMTQNII 67
          +I  E  +RG  D V           + ++A+   +++HNHPSG   PS AD+ +   + 
Sbjct: 37 VIDAEPLARGNRDAVA---------AIMIAASFGDVVIHNHPSGILTPSRADLEIASLLG 87

Query: 68 TTLNPLNIIVHD 79
               +   + D
Sbjct: 88 N--QGVGFYIID 97


>gi|254168308|ref|ZP_04875154.1| hypothetical protein ABOONEI_2834 [Aciduliprofundum boonei T469]
 gi|254168431|ref|ZP_04875276.1| hypothetical protein ABOONEI_353 [Aciduliprofundum boonei T469]
 gi|289595755|ref|YP_003482451.1| hypothetical protein Aboo_0077 [Aciduliprofundum boonei T469]
 gi|197622712|gb|EDY35282.1| hypothetical protein ABOONEI_353 [Aciduliprofundum boonei T469]
 gi|197622817|gb|EDY35386.1| hypothetical protein ABOONEI_2834 [Aciduliprofundum boonei T469]
 gi|289533542|gb|ADD07889.1| conserved hypothetical protein [Aciduliprofundum boonei T469]
          Length = 123

 Score = 35.8 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 12/83 (14%)

Query: 2   FLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADIN 61
           FL   + +I + +   GT+      +  ++ + ++ +    +  H+HPSG P PS AD++
Sbjct: 30  FLRAKHNIIYEIILLPGTVSGGSSVLYNLLMKPIDFTIVGSV--HSHPSGFPIPSRADLD 87

Query: 62  MTQNIITTLNPLNIIVHDHIIIG 84
           M                 HII+ 
Sbjct: 88  MFSKTGDV----------HIIVA 100


>gi|327192093|gb|EGE59071.1| hypothetical protein RHECNPAF_248005 [Rhizobium etli CNPAF512]
          Length = 41

 Score = 35.8 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          MT+ II     L+IIVHD IIIGK+  V  KGL +I
Sbjct: 1  MTKVIIDAAKALDIIVHDQIIIGKNGHVGLKGLTLI 36


>gi|320645640|gb|EFX14645.1| DNA repair protein, RadC family [Escherichia coli O157:H- str.
          493-89]
          Length = 87

 Score = 35.8 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 1  LFLDKHNILIADEVQSRGT 19
          L+L+  N LIA E    GT
Sbjct: 62 LYLNNQNQLIAGETLFTGT 80


>gi|218510680|ref|ZP_03508558.1| DNA repair protein RadC [Rhizobium etli Brasil 5]
          Length = 41

 Score = 35.8 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          MT+ II     L+IIVHD IIIGK+  V  KGL +I
Sbjct: 1  MTKVIIDAAKALDIIVHDQIIIGKNGHVGLKGLTLI 36


>gi|307269918|ref|ZP_07551244.1| DNA repair protein RadC family protein [Enterococcus faecalis
           TX4248]
 gi|312899721|ref|ZP_07759044.1| DNA repair protein RadC family protein [Enterococcus faecalis
           TX0470]
 gi|306513708|gb|EFM82314.1| DNA repair protein RadC family protein [Enterococcus faecalis
           TX4248]
 gi|311293153|gb|EFQ71709.1| DNA repair protein RadC family protein [Enterococcus faecalis
           TX0470]
          Length = 181

 Score = 35.8 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 6/34 (17%), Positives = 18/34 (52%), Gaps = 3/34 (8%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVP---VYIREIV 31
           ++L+  N +I  +   +G+++      +Y++ I 
Sbjct: 141 IYLNTKNDIIQQKTIFKGSLNQSVNNTMYLKFIF 174


>gi|255658317|ref|ZP_05403726.1| putative GTP-binding protein HflX [Mitsuokella multacida DSM 20544]
 gi|260849636|gb|EEX69643.1| putative GTP-binding protein HflX [Mitsuokella multacida DSM 20544]
          Length = 615

 Score = 35.4 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           ++L++   ++     S G  D   V + E   R  E   T I  +H HPSG+   S+ D+
Sbjct: 53  VYLNRQGKVL---QVSVGDTDT--VDLPEFKSRRAEGKLTGIRCIHTHPSGDTRLSEPDL 107

Query: 61  NMTQNII-TTLNPLNII 76
           +  + +    +  +   
Sbjct: 108 SSLRRLRFDCMAAIGFR 124


>gi|257080642|ref|ZP_05575003.1| predicted protein [Enterococcus faecalis E1Sol]
 gi|256988672|gb|EEU75974.1| predicted protein [Enterococcus faecalis E1Sol]
          Length = 186

 Score = 35.4 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 6/34 (17%), Positives = 18/34 (52%), Gaps = 3/34 (8%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVP---VYIREIV 31
           ++L+  N +I  +   +G+++      +Y++ I 
Sbjct: 146 IYLNTKNDIIQQKTIFKGSLNQSVNNTMYLKFIF 179


>gi|312888475|ref|ZP_07748048.1| riboflavin biosynthesis protein RibF [Mucilaginibacter paludis
          DSM 18603]
 gi|311299052|gb|EFQ76148.1| riboflavin biosynthesis protein RibF [Mucilaginibacter paludis
          DSM 18603]
          Length = 307

 Score = 35.4 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 8  ILIADEVQSRGTIDHVPVYIREIVQR----CLELSATSIILVHN-HPSGNPNPSDADINM 62
           LI + V + GT D V    R+I+ +      E    ++IL    HP    NP D  + M
Sbjct: 11 KLITNAVVTIGTFDGVHTGHRKIIAKLQELAQECGGETVILTFFPHPRMILNPEDQSLKM 70

Query: 63 TQNIITTLNPLNIIVHDHIIIG 84
             I      L  +  DH+I+ 
Sbjct: 71 ITTINEKAELLEGLGVDHLIVT 92


>gi|255533430|ref|YP_003093802.1| riboflavin biosynthesis protein RibF [Pedobacter heparinus DSM
          2366]
 gi|255346414|gb|ACU05740.1| riboflavin biosynthesis protein RibF [Pedobacter heparinus DSM
          2366]
          Length = 311

 Score = 35.0 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)

Query: 17 RGTIDHVPVYIREIVQRCLELSAT----SIILVHN-HPSGNPNPSDADINMTQNIITTLN 71
           GT D V    ++I++R  EL+      S+IL    HP    +P + D+ M   I     
Sbjct: 20 IGTFDGVHYGHQKIIKRLCELARATGGESVILTFFPHPRLIIDPENQDLKMINTIDEKAK 79

Query: 72 PLNIIVHDHIIIG 84
           L  +  DH+II 
Sbjct: 80 ILAALGVDHLIIT 92


>gi|310779145|ref|YP_003967478.1| helicase c2 [Ilyobacter polytropus DSM 2926]
 gi|309748468|gb|ADO83130.1| helicase c2 [Ilyobacter polytropus DSM 2926]
          Length = 815

 Score = 35.0 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 8/52 (15%)

Query: 11 ADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
            E+ +RG  + VP  ++++ +R         +++HNHPSG   PSDAD+ +
Sbjct: 41 HVEILARGNKNSVPAIMKQMKKR--------EVIIHNHPSGYLYPSDADVQI 84


>gi|39995471|ref|NP_951422.1| ATP-dependent helicase DinG [Geobacter sulfurreducens PCA]
 gi|39982234|gb|AAR33695.1| ATP-dependent helicase DinG [Geobacter sulfurreducens PCA]
 gi|307634692|gb|ADI83194.2| ATP-dependent DNA helicase DinG [Geobacter sulfurreducens KN400]
          Length = 840

 Score = 35.0 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 14/73 (19%)

Query: 9  LIADEVQSRGTIDHVPVYIREIVQRCLELSATSI--ILVHNHPSGNPNPSDADINMTQNI 66
          ++  E  +RG  D V             + ATS   +++HNHPSG   PS AD+ +   +
Sbjct: 37 VVEVEPLARGNRDAV----------AAIMIATSFGDVVIHNHPSGVLTPSQADVEIASLL 86

Query: 67 ITTLNPLNIIVHD 79
                +   + D
Sbjct: 87 GN--QGVGFSIID 97


>gi|121533669|ref|ZP_01665496.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
 gi|121307660|gb|EAX48575.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1]
          Length = 597

 Score = 34.6 bits (79), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 6/77 (7%)

Query: 1   LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADI 60
           L+L++   +I     + G  +   V + +   R      + +  +H HPSG+   SD D+
Sbjct: 54  LYLNRRGQVIR---VAIG--NATTVDLPQANGRHALNRLSGLRCLHTHPSGDSRLSDVDL 108

Query: 61  NMTQNII-TTLNPLNII 76
              + +    +  L + 
Sbjct: 109 ASLREMRFDLMAALGVE 125


>gi|307718257|ref|YP_003873789.1| hypothetical protein STHERM_c05470 [Spirochaeta thermophila DSM
           6192]
 gi|306531982|gb|ADN01516.1| hypothetical protein STHERM_c05470 [Spirochaeta thermophila DSM
           6192]
          Length = 812

 Score = 34.6 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%)

Query: 3   LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
           LD    +   EV SRG ++  P  +R + +          +++HNHPSG   PS AD+++
Sbjct: 36  LDGAGTVDRVEVVSRGDVESAPAVLRHLERV--------DVVIHNHPSGVLAPSKADLSV 87

Query: 63  TQNIITTLNPLNIIVHD 79
              +      +   + D
Sbjct: 88  AGILGE--EGVGFYIVD 102


>gi|91203183|emb|CAJ72822.1| similar to ATP-dependent DNA helicase (DNA-damage-inducible
          protein G) [Candidatus Kuenenia stuttgartiensis]
          Length = 847

 Score = 34.6 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 9/66 (13%)

Query: 7  NILIAD-EVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQN 65
          N +IAD EV + G  + VP  +RE+            +++HNHP+GN  PS+ DI +   
Sbjct: 41 NYMIADIEVYAMGNKNAVPAILREV--------KHGEVIIHNHPNGNLTPSEEDIEVASE 92

Query: 66 IITTLN 71
          + +   
Sbjct: 93 MGSLGA 98


>gi|257076688|ref|ZP_05571049.1| Mov34/MPN/PAD-1 family protein [Ferroplasma acidarmanus fer1]
          Length = 110

 Score = 34.3 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 14/84 (16%)

Query: 2  FLDKHNILIADEVQSRGTIDHVPVYIREIVQ-RCLELSATSIILVHNHPSGNPNPSDADI 60
           L   + +I +     G+I+     +  I +   + L  + +  VH+HPSGN +PSDAD+
Sbjct: 17 LLRAEHQIIYEIALVPGSING---PVHVIFRTYTMPLDFSYVGSVHSHPSGNTHPSDADL 73

Query: 61 NMTQNIITTLNPLNIIVHDHIIIG 84
          +M  N              HII+G
Sbjct: 74 HMFSNTGPV----------HIIVG 87


>gi|315186280|gb|EFU20041.1| helicase c2 [Spirochaeta thermophila DSM 6578]
          Length = 809

 Score = 34.3 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%)

Query: 3  LDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINM 62
          LD    +   EV SRG ++  P  +R++ +          +++HNHPSG   PS AD+ +
Sbjct: 33 LDGEGTVERVEVVSRGDVESAPAVLRQLERV--------DVVIHNHPSGVLAPSKADLAV 84

Query: 63 TQNIITTLNPLNIIVHD 79
             +      +   + D
Sbjct: 85 AGILGE--EGVGFYIVD 99


>gi|218512437|ref|ZP_03509277.1| DNA repair protein RadC [Rhizobium etli 8C-3]
          Length = 41

 Score = 33.9 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 23/36 (63%)

Query: 62 MTQNIITTLNPLNIIVHDHIIIGKDAFVSFKGLRII 97
          MT+ II     L IIVHD IIIGK+  V  KGL +I
Sbjct: 1  MTKVIIDAAKALAIIVHDQIIIGKNGHVGLKGLTLI 36


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.313    0.176    0.530 

Lambda     K      H
   0.267   0.0543    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,159,979,415
Number of Sequences: 13984884
Number of extensions: 42445749
Number of successful extensions: 114727
Number of sequences better than 10.0: 2466
Number of HSP's better than 10.0 without gapping: 2431
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 112089
Number of HSP's gapped (non-prelim): 2473
length of query: 97
length of database: 4,792,584,752
effective HSP length: 66
effective length of query: 31
effective length of database: 3,869,582,408
effective search space: 119957054648
effective search space used: 119957054648
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 77 (33.9 bits)