HHsearch alignment for GI: peg_817 and conserved domain: COG0322
>COG0322 UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair].
Probab=96.02 E-value=0.0098 Score=38.47 Aligned_cols=37 Identities=35% Similarity=0.502 Sum_probs=34.4
Q ss_pred HHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHH
Q ss_conf 99999737997898509978997378988999999754
Q 537021.9.peg.8 60 AKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKL 97 (148)
Q Consensus 60 A~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a 97 (148)
T Consensus 543 ~~~LL~~Fgs~~~i~~As~eel~~v-gi~~~~a~~i~~ 579 (581)
T COG0322 543 RKALLKHFGSLKGIKSASVEELAKV-GISKKLAEKIYE 579 (581)
T ss_pred HHHHHHHHHCHHHHHHCCHHHHHHC-CCCHHHHHHHHH
T ss_conf 9999998317888885599999874-999999999985