HHsearch alignment for GI: peg_817 and conserved domain: COG1623

>COG1623 Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only].

Probab=96.68  E-value=0.005  Score=40.36  Aligned_cols=42  Identities=29%  Similarity=0.405  Sum_probs=37.8

Q ss_pred             HHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             999999997379978985099789973789889999997549
Q 537021.9.peg.8   57 KSIAKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLV   98 (148)
Q Consensus        57 ~~lA~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a~   98 (148)
T Consensus       303 ~~iv~nlV~~F~~l~~il~As~edL~~VeGIGe~rAr~i~~G  344 (349)
T COG1623         303 FAIVENLVRAFGTLDGILEASAEDLDAVEGIGEARARAIKEG  344 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHH
T ss_conf             789999999975289998714767766213669999999976