HHsearch alignment for GI: peg_817 and conserved domain: COG1948

>COG1948 MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair].

Probab=97.45  E-value=0.00035  Score=47.85  Aligned_cols=68  Identities=28%  Similarity=0.354  Sum_probs=50.8

Q ss_pred             HHCCH-HHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             82392-21898999999973379989889999999973799789850997899737898899999975499
Q 537021.9.peg.8   30 LQKGE-NALAYYEILELILFRLIPRKDTKSIAKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLVS   99 (148)
Q Consensus        30 l~~G~-~~LsD~ELLallL~~g~~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a~~   99 (148)
T Consensus       166 ~~~~~~~~~t~~e~q~~il-~s~pgi-g~~~a~~ll~~fgS~~~~~tas~~eL~~v~gig~k~A~~I~~~~  234 (254)
T COG1948         166 NPHGKKKAKTLKELQLYIL-ESIPGI-GPKLAERLLKKFGSVEDVLTASEEELMKVKGIGEKKAREIYRFL  234 (254)
T ss_pred             CCCCCCCCCCHHHHHHHHH-HCCCCC-CHHHHHHHHHHHCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             6554322245578999999-708996-48999999998568887765599999774484688999999998