HHsearch alignment for GI: peg_817 and conserved domain: COG2003
>COG2003 RadC DNA repair proteins [DNA replication, recombination, and repair].
Probab=100.00 E-value=1.2e-36 Score=257.42 Aligned_cols=130 Identities=21% Similarity=0.280 Sum_probs=126.7
Q ss_pred CCCCCHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHH
Q ss_conf 63001650199999823922189899999997337998988999999997379978985099789973789889999997
Q 537021.9.peg.8 16 LDYIGHHNRLRDRFLQKGENALAYYEILELILFRLIPRKDTKSIAKALLKRFATLGGVFGAPLHLLQEINRIGKRVALEL 95 (148)
Q Consensus 16 ~~~~ghr~R~RErll~~G~~~LsD~ELLallL~~g~~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l 95 (148)
T Consensus 3 i~~~~~~~rPRErll~~G~~~Lsd~ELLailLrtG~~~~~~~~la~~lL~~fg~L~~l~~a~~~el~~v~GiG~aka~~l 82 (224)
T COG2003 3 IKDNPENERPRERLLKLGAEALSDAELLAILLRTGTKGESVLDLAKELLQEFGSLAELLKASVEELSSVKGIGLAKAIQI 82 (224)
T ss_pred CCCCCCCCCHHHHHHHHCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHCCCCCHHHHHHH
T ss_conf 44465310618999872845346689999999628999878999999999732588887379999951788338899999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECC
Q ss_conf 54999999999987640677889899999999984597800025212102
Q 537021.9.peg.8 96 KLVSVASQRILKANWSIKKFLTPGQPCLISVERHYPMKNANNFAYCFSIN 145 (148)
Q Consensus 96 ~a~~El~rR~~~~~~~~~~~l~s~~~v~~yl~~~l~~~~~E~F~vLF~~N 145 (148)
T Consensus 83 ~a~~El~~R~~~~~~~~~~~i~sp~~~~~~l~~~l~~~~~E~f~vL~Ld~ 132 (224)
T COG2003 83 KAAIELGKRILAERLREGVVITSPEAVAEYLRAELGGEEREHFVVLYLDS 132 (224)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999987505775489999999999986134889999999547