HHsearch alignment for GI: peg_817 and conserved domain: cd00056

>cd00056 ENDO3c endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases.

Probab=91.91  E-value=1.2  Score=25.05  Aligned_cols=64  Identities=25%  Similarity=0.307  Sum_probs=50.3

Q ss_pred             HHHHHHHHCCCCCCCHHHHHHHHHHHCC-CHHHHHCCCHHHHHH-CCCCC-HHHHHHHHHHHHHHHHHHH
Q ss_conf             9999997337998988999999997379-978985099789973-78988-9999997549999999999
Q 537021.9.peg.8   41 EILELILFRLIPRKDTKSIAKALLKRFA-TLGGVFGAPLHLLQE-INRIG-KRVALELKLVSVASQRILK  107 (148)
Q Consensus        41 ELLallL~~g~~~~~~~~lA~~lL~~fG-sL~~ll~as~~eL~~-i~GIG-~aka~~l~a~~El~rR~~~  107 (148)
T Consensus         3 ~Li~~Il~qq~s~~~a~~~~~~l~~~~~pt~~~l~~~~~~~l~~~~~~~gy~~Ka~~i~---~~a~~i~~   69 (158)
T cd00056           3 VLVSEILSQQTTDKAVNKAYERLFERYGPTPEALAAADEEELRELIRSLGYRRKAKYLK---ELARAIVE   69 (158)
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHCCCCHHHHHHHHH---HHHHHHHH
T ss_conf             99999998145299999999999985499899998099999999973356899999999---98888898