HHsearch alignment for GI: peg_817 and conserved domain: pfam00633

>pfam00633 HHH Helix-hairpin-helix motif. The helix-hairpin-helix DNA-binding motif is found to be duplicated in the central domain of RuvA. The HhH domain of DisA, a bacterial checkpoint control protein, is a DNA-binding domain.

Probab=94.14  E-value=0.03  Score=35.35  Aligned_cols=29  Identities=21%  Similarity=0.277  Sum_probs=25.1

Q ss_pred             CHHHHHCCCHHHHHHCCCCCHHHHHHHHH
Q ss_conf             97898509978997378988999999754
Q 537021.9.peg.8   69 TLGGVFGAPLHLLQEINRIGKRVALELKL   97 (148)
Q Consensus        69 sL~~ll~as~~eL~~i~GIG~aka~~l~a   97 (148)
T Consensus         1 ~~~~~~~as~eeL~~lpGVG~~tA~~I~~   29 (30)
T pfam00633         1 SLEGLIPASREELLALPGVGPKTAEAILS   29 (30)
T ss_pred             CCCCCCCCCHHHHHHCCCCCHHHHHHHHC
T ss_conf             96443523599997288977688998853