HHsearch alignment of GI: peg_817 and MMDB domain: 1z00_A_

>1z00_A (A:) DNA excision repair protein ERCC-1; helix-hairpin-helix, hydrolase; HET: DNA; NMR {Homo sapiens}
Probab=97.61  E-value=0.00011  Score=50.63  Aligned_cols=50  Identities=20%  Similarity=0.181  Sum_probs=42.1

Q ss_pred             CCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             379989889999999973799789850997899737898899999975499
Q 537021.9.peg.8   49 RLIPRKDTKSIAKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLVS   99 (148)
Q Consensus        49 ~g~~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a~~   99 (148)
                      +|.|+..- ..|+.|+.+|||+..+.+|++++|.+++|||+.+|..|.-.+
T Consensus        22 ~~I~gIG~-~~a~~L~~~F~s~~~i~~A~~~~L~~v~GiG~~~A~~i~~~~   71 (89)
T 1z00_A           22 TTVKSVNK-TDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVL   71 (89)
T ss_dssp             TTSSSCCH-HHHHHHHHHTCBHHHHHHCCHHHHHTSTTCCHHHHHHHHHHH
T ss_pred             CCCCCCCH-HHHHHHHHHHCCCHHHHHHHHHHHCHHCCCCHHHHHHHHHHH
T ss_conf             58997699-999999999099478766547510000332799999999998