HHsearch results for GI: peg_817 and protein with PDBid: 1orn_A
>1orn_A Endonuclease III; DNA repair, DNA glycosylase, [4Fe-4S] cluster, iron-sulfur cluster, hydrolase/DNA complex; HET: PED; 1.70A {Geobacillus stearothermophilus} SCOP: a.96.1.1 PDB: 1orp_A* 1p59_A*
Probab=94.75 E-value=0.029 Score=34.01 Aligned_cols=94 Identities=13% Similarity=0.145 Sum_probs=60.5
Q ss_pred HCCHHHHHHHHHHCCCCC---CCHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHH---------HHH
Q ss_conf 189899999997337998---98899999999737997898509978997378988999999754999---------999
Q 537021.9.peg.8 36 ALAYYEILELILFRLIPR---KDTKSIAKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLVSV---------ASQ 103 (148)
Q Consensus 36 ~LsD~ELLallL~~g~~~---~~~~~lA~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a~~E---------l~r 103 (148)
..+..|+++++-+.|..+ .+.+..|+.+.++||| .+-.+.++|.+++|||+..|..+.+..- =..
T Consensus 70 ~a~~~el~~~i~~~g~y~~ka~~i~~~a~~i~~~~~g---~vP~~~~~L~~LpGVG~kTA~~il~~a~~~p~~~VDtnv~ 146 (226)
T 1orn_A 70 AVPLEELEQDIRSIGLYRNKARNIQKLCAMLIDKYNG---EVPRDRDELMKLPGVGRKTANVVVSVAFGVPAIAVDTHVE 146 (226)
T ss_dssp SSCHHHHHHHTGGGSSHHHHHHHHHHHHHHHHHHSTT---SCCSCHHHHTTSTTCCHHHHHHHHHHHHCCCCCCCCHHHH
T ss_pred CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC---CCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf 3899899898874221999999999999999999299---7987899997487753679999999981688677885556
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 999987640677889899999999984597
Q 537021.9.peg.8 104 RILKANWSIKKFLTPGQPCLISVERHYPMK 133 (148)
Q Consensus 104 R~~~~~~~~~~~l~s~~~v~~yl~~~l~~~ 133 (148)
|+.. ++.--..-.++..+...++..+...
T Consensus 147 RV~~-Rlg~~~~~~~~~~~~~~l~~~~p~~ 175 (226)
T 1orn_A 147 RVSK-RLGFCRWDDSVLEVEKTLMKIIPKE 175 (226)
T ss_dssp HHHH-HHTSSCTTCCHHHHHHHHHHHSCGG
T ss_pred HHHH-HHCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 8998-8286665540367899999838653