HHsearch results for GI: peg_817 and protein with PDBid: 2abk_A

>2abk_A Endonuclease III; DNA-repair, DNA glycosylase; 1.85A {Escherichia coli} SCOP: a.96.1.1
Probab=93.83  E-value=0.038  Score=33.25  Aligned_cols=89  Identities=9%  Similarity=-0.009  Sum_probs=52.8

Q ss_pred             CHHHHHHHHHHCCCC---CCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHH----------HH
Q ss_conf             989999999733799---89889999999973799789850997899737898899999975499999----------99
Q 537021.9.peg.8   38 AYYEILELILFRLIP---RKDTKSIAKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLVSVAS----------QR  104 (148)
Q Consensus        38 sD~ELLallL~~g~~---~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a~~El~----------rR  104 (148)
                      +..||.+++=+.|..   -...+.+|+.+.++|||   -+--+.++|.++||||+..|.-+.+. ..+          +|
T Consensus        68 ~~~~l~~~i~~~G~y~~Ka~~l~~~a~~i~~~~~g---~~p~~~~~L~~LpGVG~kTA~~il~~-a~~~~~~~VDtnv~R  143 (211)
T 2abk_A           68 GVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNG---EVPEDRAALEALPGVGRKTANVVLNT-AFGWPTIAVDTHIFR  143 (211)
T ss_dssp             HHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHTTT---SCCSCHHHHHHSTTCCHHHHHHHHHH-HHCCCCCCCCHHHHH
T ss_pred             CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCHHHHHHCCCCCHHHHHHHHHH-HHCCCCCCCCCCHHH
T ss_conf             99999999986217999999999999999998489---99832999871788736999999998-735886214622778


Q ss_pred             HHHHHHHHCCCCCCHHHHHHHHHHHHCC
Q ss_conf             9998764067788989999999998459
Q 537021.9.peg.8  105 ILKANWSIKKFLTPGQPCLISVERHYPM  132 (148)
Q Consensus       105 ~~~~~~~~~~~l~s~~~v~~yl~~~l~~  132 (148)
                      ++.- ..- ..-.++.++...+...+..
T Consensus       144 v~~R-~g~-~~~~~~~~~~~~~~~~~p~  169 (211)
T 2abk_A          144 VCNR-TQF-APGKNVEQVEEKLLKVVPA  169 (211)
T ss_dssp             HHHH-HCS-SCCSSHHHHHHHHHHHSCG
T ss_pred             HHHH-HCC-CCCCCHHHHHHHHHHCCCC
T ss_conf             9998-576-7899889999998721760