HHsearch results for GI: peg_817 and protein with PDBid: 2zj8_A

>2zj8_A DNA helicase, putative SKI2-type helicase; RECA fold, ATP-binding, hydrolase, nucleotide- binding; 2.00A {Pyrococcus furiosus} PDB: 2zj5_A* 2zj2_A 2zja_A*
Probab=94.92  E-value=0.039  Score=33.19  Aligned_cols=45  Identities=20%  Similarity=0.220  Sum_probs=36.7

Q ss_pred             HHHHHHHHHH-CCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             9999999973-79978985099789973789889999997549999999
Q 537021.9.peg.8   57 KSIAKALLKR-FATLGGVFGAPLHLLQEINRIGKRVALELKLVSVASQR  104 (148)
Q Consensus        57 ~~lA~~lL~~-fGsL~~ll~as~~eL~~i~GIG~aka~~l~a~~El~rR  104 (148)
                      ...|+.|++. |+|+..+.++++++|.+++|+|+..|.   ++.+...|
T Consensus       656 ~~~ar~L~~~G~~s~~~i~~~~~~~l~~v~g~g~k~a~---~i~~~~~~  701 (720)
T 2zj8_A          656 RRRARALYNSGFRSIEDISQARPEELLKIEGIGVKTVE---AIFKFLGK  701 (720)
T ss_dssp             HHHHHHHHTTTCCSHHHHHTCCHHHHHTSTTCCHHHHH---HHHHHHC-
T ss_pred             HHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCCCHHHHH---HHHHHHCH
T ss_conf             99999999879999999974998898527694899999---99974450