HHSEARCH alignment of GI: peg_817 and SCOP domain: d1dgsa1

Alignment

Probab=97.20  E-value=0.00044  Score=44.23  Aligned_cols=58  Identities=22%  Similarity=0.326  Sum_probs=47.4

Q ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf             99999733799898899999999737997898509978997378988999999754999
Q 537021.9.peg.8   42 ILELILFRLIPRKDTKSIAKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLVSV  100 (148)
Q Consensus        42 LLallL~~g~~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a~~E  100 (148)
                      |=-+|-..|.|+.- ...|+.|.++||++..+.+|+.++|..|+|||+..|..|..-+.
T Consensus       103 l~r~l~aLGI~~vG-~~~Ak~La~~f~sl~~l~~as~eeL~~I~GIG~~~A~si~~ff~  160 (181)
T d1dgsa1         103 LERLLYALGLPGVG-EVLARNLARRFGTMDRLLEASLEELIEVEEVGELTARAILETLK  160 (181)
T ss_dssp             HHHHHHHTTCSSCC-HHHHHHHHHTTSBHHHHTTCCHHHHHTSTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
T ss_conf             89999998754344-77899999876200255412789886107827999999999987

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: RuvA domain 2-like
family: NAD+-dependent DNA ligase, domain 3
domain: NAD+-dependent DNA ligase, domain 3
species: Thermus filiformis [TaxId: 276]