HHSEARCH alignment of GI: peg_817 and SCOP domain: d1ngna_

Alignment

Probab=95.00  E-value=0.025  Score=32.95  Aligned_cols=61  Identities=13%  Similarity=0.114  Sum_probs=52.1

Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHH-CCCCC--HHHHHHHHHHHH
Q ss_conf             99999997337998988999999997379978985099789973-78988--999999754999
Q 537021.9.peg.8   40 YEILELILFRLIPRKDTKSIAKALLKRFATLGGVFGAPLHLLQE-INRIG--KRVALELKLVSV  100 (148)
Q Consensus        40 ~ELLallL~~g~~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~-i~GIG--~aka~~l~a~~E  100 (148)
                      .-|++.+|..-+....|....++|.++|.+...+.+++.++|.+ |+++|  ..||..|+.+.+
T Consensus        22 ~~LV~~ILsqqT~~~~v~~v~~~L~~~~pt~e~la~a~~~el~~~Ir~~G~~~~KAk~I~~~a~   85 (144)
T d1ngna_          22 KLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEVARAADWRDVSELLKPLGLYDLRAKTIIKFSD   85 (144)
T ss_dssp             HHHHHHHHHTTSCHHHHHHHHHHHHHHSCSHHHHHHSCHHHHHHHTGGGSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999986097999999999999867710211026889999998754248789999999985

SCOP domain information

class: All alpha proteins
fold: DNA-glycosylase
superfamily: DNA-glycosylase
family: Mismatch glycosylase
domain: Mismatch-specific thymine glycosylase domain of the methyl-GpG binding protein mbd4
species: Mouse (Mus musculus) [TaxId: 10090]