HHSEARCH alignment of GI: peg_817 and SCOP domain: d1orna_

Alignment

Probab=92.64  E-value=0.14  Score=28.05  Aligned_cols=64  Identities=17%  Similarity=0.311  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHH-CCCCC--HHHHHHHHHHHHHH
Q ss_conf             899999997337998988999999997379978985099789973-78988--99999975499999
Q 537021.9.peg.8   39 YYEILELILFRLIPRKDTKSIAKALLKRFATLGGVFGAPLHLLQE-INRIG--KRVALELKLVSVAS  102 (148)
Q Consensus        39 D~ELLallL~~g~~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~-i~GIG--~aka~~l~a~~El~  102 (148)
                      =.-|++.+|..-|+...|....++++++|.+...+..++.+++.. +.|+|  ..||..|+.+.+..
T Consensus        31 ~~vLVs~iLsqqT~~~~v~~~~~~l~~~~pt~~~la~~~~~e~~~~i~~~g~y~~ka~~l~~~a~~i   97 (214)
T d1orna_          31 FELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAML   97 (214)
T ss_dssp             HHHHHHHHHHTTSCHHHHHHHHHHHHHHCCSHHHHHSSCHHHHHHHTGGGSSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999998519199998887522103575465520557776533210324108889999985547

SCOP domain information

class: All alpha proteins
fold: DNA-glycosylase
superfamily: DNA-glycosylase
family: Endonuclease III
domain: Endonuclease III
species: Escherichia coli [TaxId: 562]