HHSEARCH alignment of GI: peg_817 and SCOP domain: d1x2ia1

Alignment

Probab=97.89  E-value=2.9e-05  Score=51.87  Aligned_cols=61  Identities=31%  Similarity=0.496  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             898999999973379989889999999973799789850997899737898899999975499
Q 537021.9.peg.8   37 LAYYEILELILFRLIPRKDTKSIAKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLVS   99 (148)
Q Consensus        37 LsD~ELLallL~~g~~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a~~   99 (148)
                      ++-.|....+| .|.|+-.-. .|+.|+++|||+..+.+|+.++|.+|+|||+.+|..|.-.+
T Consensus         2 ~~~~~~~~~~L-~~I~gIG~~-~a~~L~~~f~s~~~i~~As~eeL~~i~GIG~~~A~~I~~~~   62 (68)
T d1x2ia1           2 LTLAERQRLIV-EGLPHVSAT-LARRLLKHFGSVERVFTASVAELMKVEGIGEKIAKEIRRVI   62 (68)
T ss_dssp             CCHHHHHHHHH-TTSTTCCHH-HHHHHHHHHCSHHHHHHCCHHHHTTSTTCCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHH-CCCCCCCHH-HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             98899999998-189996899-99999997499999988589999727996999999999998

SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: RuvA domain 2-like
family: Hef domain-like
domain: ATP-dependent RNA helicase PF2015
species: Pyrococcus furiosus [TaxId: 2261]