BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 537021.9.peg.817_1
         (148 letters)

Database: las_proteome 
           1233 sequences; 328,796 total letters

Searching...................................................done



>537021.9.peg.817_1 
          Length = 148

 Score =  303 bits (777), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 148/148 (100%), Positives = 148/148 (100%)

Query: 1   LEDFRMSKAPSKDSHLDYIGHHNRLRDRFLQKGENALAYYEILELILFRLIPRKDTKSIA 60
           LEDFRMSKAPSKDSHLDYIGHHNRLRDRFLQKGENALAYYEILELILFRLIPRKDTKSIA
Sbjct: 1   LEDFRMSKAPSKDSHLDYIGHHNRLRDRFLQKGENALAYYEILELILFRLIPRKDTKSIA 60

Query: 61  KALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLVSVASQRILKANWSIKKFLTPGQ 120
           KALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLVSVASQRILKANWSIKKFLTPGQ
Sbjct: 61  KALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLVSVASQRILKANWSIKKFLTPGQ 120

Query: 121 PCLISVERHYPMKNANNFAYCFSINIIF 148
           PCLISVERHYPMKNANNFAYCFSINIIF
Sbjct: 121 PCLISVERHYPMKNANNFAYCFSINIIF 148


>gi|254780281|ref|YP_003064694.1| cytochrome-c oxidase assembly factor protein [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 201

 Score = 25.0 bits (53), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 9/32 (28%), Positives = 21/32 (65%), Gaps = 1/32 (3%)

Query: 52  PRKDTKSIAKALLKRFAT-LGGVFGAPLHLLQ 82
           P++DT  + K  ++RF+  + G+ G P+ +++
Sbjct: 102 PKRDTPEVMKKFVQRFSDRIIGISGDPIDVMR 133


>gi|254780669|ref|YP_003065082.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 301

 Score = 22.7 bits (47), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 113 KKFLTPGQPCLISVERHYPMKNANNFAYCFSINI 146
           ++F+    PC I    H  M     +A C S+NI
Sbjct: 43  QRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNI 76


>gi|254781110|ref|YP_003065523.1| von Willebrand factor type A [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 420

 Score = 21.6 bits (44), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 120 QPCLISVERHYPMKNANNFAYCF 142
           + C+ S E HY + NA++  + F
Sbjct: 380 KTCVSSPEYHYNVVNADSLIHVF 402


>gi|254780621|ref|YP_003065034.1| small heat shock protein [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 157

 Score = 21.2 bits (43), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 34  ENALAYYEILELILFRLIPRK 54
           EN L Y E+L  +  R+ PR+
Sbjct: 114 ENGLLYLELLRSVPERMKPRR 134


>gi|254780412|ref|YP_003064825.1| hypothetical protein CLIBASIA_01485 [Candidatus Liberibacter
          asiaticus str. psy62]
          Length = 94

 Score = 21.2 bits (43), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 9/47 (19%)

Query: 54 KDTKSIAKALLKRFATLGGVFGAP---------LHLLQEINRIGKRV 91
          K+ +S A+  ++R     GV  A           HL +EI  IGKR+
Sbjct: 28 KEAESFAQIKIQRTLNSMGVVRAEEIENVKRTTSHLREEITAIGKRL 74


  Database: las_proteome
    Posted date:  Jun 5, 2011  6:30 PM
  Number of letters in database: 328,796
  Number of sequences in database:  1233
  
Lambda     K      H
   0.326    0.141    0.417 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,568
Number of Sequences: 1233
Number of extensions: 3168
Number of successful extensions: 12
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 8
length of query: 148
length of database: 328,796
effective HSP length: 66
effective length of query: 82
effective length of database: 247,418
effective search space: 20288276
effective search space used: 20288276
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 34 (17.7 bits)