Query 537021.9.peg.834_1
Match_columns 42
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 23785
Date Wed May 25 00:32:39 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_834.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qmy_A Protease, leader protea 10.4 79 0.0033 14.4 1.2 14 7-20 28-41 (167)
2 3g36_A Protein DPY-30 homolog; 7.5 1.3E+02 0.0053 13.4 1.2 14 24-37 37-50 (55)
3 2jkg_A Profilin; proline-rich 6.8 1.2E+02 0.0052 13.4 0.9 18 21-38 156-173 (179)
4 2nml_A Enhancer of rudimentary 6.5 1.5E+02 0.0065 13.0 1.2 10 6-15 53-62 (104)
5 3nec_A Profilin, inflammatory 5.1 1.7E+02 0.0073 12.7 0.8 17 20-36 150-166 (166)
6 2wx4_A DCP1, decapping protein 4.8 2.1E+02 0.009 12.2 1.3 11 5-15 12-22 (46)
7 3nul_A Profilin I; cytoskeleto 4.4 2.3E+02 0.0097 12.1 1.9 19 18-36 112-130 (130)
8 1u57_A GAG polyprotein, HIV-1; 2.0 4.3E+02 0.018 10.7 1.1 11 15-25 12-22 (48)
9 1uv7_A General secretion pathw 1.9 3.7E+02 0.016 11.1 -0.1 19 3-21 55-73 (110)
10 1ypr_A Profilin; actin-binding 1.9 4.4E+02 0.019 10.7 1.9 20 17-36 106-125 (125)
No 1
>1qmy_A Protease, leader protease; hydrolase, sulfhydryl proteinase, picornaviral proteinase; 1.9A {Aphthovirus O} SCOP: d.3.1.2 PDB: 1qol_A 2jqf_R 2jqg_R
Probab=10.35 E-value=79 Score=14.38 Aligned_cols=14 Identities=36% Similarity=0.638 Sum_probs=11.4
Q ss_pred HHHHHHHHCCCHHH
Q ss_conf 99999985063036
Q 537021.9.peg.8 7 FSQLFTYLDIPRHK 20 (42)
Q Consensus 7 fsqlftyldiprhk 20 (42)
.-|||.|+|+|--+
T Consensus 28 ilQLfryv~epfFd 41 (167)
T 1qmy_A 28 ILQLFRYVEEPFFD 41 (167)
T ss_dssp HHHHHHHHTCCTTH
T ss_pred HHHHHHHCCCCCHH
T ss_conf 99999871753012
No 2
>3g36_A Protein DPY-30 homolog; X-type four-helix bundle, nucleus, nuclear protein; 1.20A {Homo sapiens}
Probab=7.49 E-value=1.3e+02 Score=13.37 Aligned_cols=14 Identities=36% Similarity=0.553 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999998634565
Q 537021.9.peg.8 24 MGILAEYLIANSFI 37 (42)
Q Consensus 24 mgilaeyliansfi 37 (42)
...||+||+.++--
T Consensus 37 i~~La~~Ll~~~~~ 50 (55)
T 3g36_A 37 IEFLASYLLKNKAQ 50 (55)
T ss_dssp HHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHCCCC
T ss_conf 99999999882922
No 3
>2jkg_A Profilin; proline-rich ligand, protein-binding, malaria, profilin, cytoskeleton, actin filament; 1.89A {Plasmodium falciparum} PDB: 2jkf_A
Probab=6.77 E-value=1.2e+02 Score=13.41 Aligned_cols=18 Identities=17% Similarity=0.001 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 699999999986345653
Q 537021.9.peg.8 21 YRIMGILAEYLIANSFIK 38 (42)
Q Consensus 21 yrimgilaeyliansfik 38 (42)
.....-||+||+-+|-+.
T Consensus 156 ~~~ve~LAdYL~~s~~~~ 173 (179)
T 2jkg_A 156 KIAALTFAKELAESSQLQ 173 (179)
T ss_dssp HHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHCC
T ss_conf 999999999998765224
No 4
>2nml_A Enhancer of rudimentary homolog; HEF2/ERH fold, pseudo beta barrel, interaction network, transcription, cell cycle; 1.55A {Homo sapiens} SCOP: d.330.1.1 PDB: 1w9g_A 1wwq_A 1wz7_A
Probab=6.47 E-value=1.5e+02 Score=12.96 Aligned_cols=10 Identities=50% Similarity=1.056 Sum_probs=8.0
Q ss_pred CHHHHHHHHC
Q ss_conf 0999999850
Q 537021.9.peg.8 6 NFSQLFTYLD 15 (42)
Q Consensus 6 nfsqlftyld 15 (42)
+.||||.|+|
T Consensus 53 di~~Lf~fID 62 (104)
T 2nml_A 53 DISQLFDFID 62 (104)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
T ss_conf 1999999975
No 5
>3nec_A Profilin, inflammatory profilin; actin-binding, actin-binding protein; HET: MSE; 1.70A {Toxoplasma gondii}
Probab=5.11 E-value=1.7e+02 Score=12.70 Aligned_cols=17 Identities=24% Similarity=0.280 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 66999999999863456
Q 537021.9.peg.8 20 KYRIMGILAEYLIANSF 36 (42)
Q Consensus 20 kyrimgilaeyliansf 36 (42)
--....-||+||+.+.|
T Consensus 150 ~~~~ve~LadYL~~~GY 166 (166)
T 3nec_A 150 SRTSALAFAEYLHQSGY 166 (166)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHCCC
T ss_conf 99999999999997499
No 6
>2wx4_A DCP1, decapping protein 1; asymmetric assembly, trimerization module, mRNA decapping, P-BODY component, structural protein; 2.80A {Drosophila melanogaster}
Probab=4.76 E-value=2.1e+02 Score=12.24 Aligned_cols=11 Identities=55% Similarity=0.782 Sum_probs=7.9
Q ss_pred CCHHHHHHHHC
Q ss_conf 10999999850
Q 537021.9.peg.8 5 KNFSQLFTYLD 15 (42)
Q Consensus 5 knfsqlftyld 15 (42)
..|-|-|+||-
T Consensus 12 ~Q~~QAf~YLi 22 (46)
T 2wx4_A 12 TQFVQAFTYLI 22 (46)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 89999999999
No 7
>3nul_A Profilin I; cytoskeleton, actin binding protein; HET: MSE; 1.60A {Arabidopsis thaliana} SCOP: d.110.1.1 PDB: 1a0k_A 1cqa_A 1g5u_A
Probab=4.37 E-value=2.3e+02 Score=12.09 Aligned_cols=19 Identities=21% Similarity=0.377 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 0366999999999863456
Q 537021.9.peg.8 18 RHKYRIMGILAEYLIANSF 36 (42)
Q Consensus 18 rhkyrimgilaeyliansf 36 (42)
..-.....-||+||+.+.|
T Consensus 112 g~~~~~ve~LadYL~~~g~ 130 (130)
T 3nul_A 112 GQCNLVVERLGDYLIESEL 130 (130)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCCC
T ss_conf 8999999999999997689
No 8
>1u57_A GAG polyprotein, HIV-1; particle assembly, viral protein; NMR {Human immunodeficiency virus 1}
Probab=2.03 E-value=4.3e+02 Score=10.74 Aligned_cols=11 Identities=36% Similarity=0.616 Sum_probs=8.1
Q ss_pred CCCHHHHHHHH
Q ss_conf 06303669999
Q 537021.9.peg.8 15 DIPRHKYRIMG 25 (42)
Q Consensus 15 diprhkyrimg 25 (42)
.=|.||-|++.
T Consensus 12 GGP~hKArvlA 22 (48)
T 1u57_A 12 GGPGHKARVLA 22 (48)
T ss_dssp SBCTTHHHHHH
T ss_pred CCCHHHHHHHH
T ss_conf 88408899999
No 9
>1uv7_A General secretion pathway protein M; transport; HET: MSE; 1.7A {Vibrio cholerae} SCOP: d.67.4.1
Probab=1.95 E-value=3.7e+02 Score=11.06 Aligned_cols=19 Identities=21% Similarity=0.370 Sum_probs=13.1
Q ss_pred CCCCHHHHHHHHCCCHHHH
Q ss_conf 6410999999850630366
Q 537021.9.peg.8 3 DNKNFSQLFTYLDIPRHKY 21 (42)
Q Consensus 3 dnknfsqlftyldiprhky 21 (42)
|+-.|.+|+.+|+--.-.|
T Consensus 55 ~~v~F~~Ll~WL~~Le~~~ 73 (110)
T 1uv7_A 55 QPLPFSQLVSWIAYLQERQ 73 (110)
T ss_dssp CCBCHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHC
T ss_conf 7869999999999999857
No 10
>1ypr_A Profilin; actin-binding protein, cytoskeleton; 2.30A {Saccharomyces cerevisiae} SCOP: d.110.1.1 PDB: 1k0k_A
Probab=1.95 E-value=4.4e+02 Score=10.66 Aligned_cols=20 Identities=30% Similarity=0.526 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q ss_conf 30366999999999863456
Q 537021.9.peg.8 17 PRHKYRIMGILAEYLIANSF 36 (42)
Q Consensus 17 prhkyrimgilaeyliansf 36 (42)
|..-...+.-||+||+.+.|
T Consensus 106 ~~~~~~~v~~ladYL~~~GY 125 (125)
T 1ypr_A 106 AGEATKIVEQLADYLIGVQY 125 (125)
T ss_dssp HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHCCC
T ss_conf 88999999999999997689
Done!