RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= 537021.9.peg.851_1
         (38 letters)



>gnl|CDD|180833 PRK07092, PRK07092, benzoylformate decarboxylase; Reviewed.
          Length = 530

 Score = 26.1 bits (58), Expect = 2.2
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 4  YDYILGLHE 12
          + Y+LGL E
Sbjct: 49 FRYVLGLQE 57


>gnl|CDD|180523 PRK06305, PRK06305, DNA polymerase III subunits gamma and tau;
           Validated.
          Length = 451

 Score = 24.7 bits (54), Expect = 4.9
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 8/37 (21%)

Query: 3   LYDYILGLHENFW--------LFFLKKDDFYRIMVCV 31
           LYDY++GL             L  L +D  Y +   +
Sbjct: 222 LYDYVVGLFPKSLDPDSVAKALGLLSQDSLYTLDEAI 258


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.336    0.152    0.502 

Gapped
Lambda     K      H
   0.267   0.0753    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 621,006
Number of extensions: 19593
Number of successful extensions: 72
Number of sequences better than 10.0: 1
Number of HSP's gapped: 72
Number of HSP's successfully gapped: 4
Length of query: 38
Length of database: 5,994,473
Length adjustment: 12
Effective length of query: 26
Effective length of database: 5,735,177
Effective search space: 149114602
Effective search space used: 149114602
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 50 (23.0 bits)