Query         537021.9.peg.852_1
Match_columns 38
No_of_seqs    1 out of 3
Neff          1.0 
Searched_HMMs 33803
Date          Wed May 25 02:44:55 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_852.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 >3hr0_A COG4; conserved oligom  19.5      40  0.0012   16.9   0.9   28   10-37     50-77  (80)
  2 >2w02_A ACSD; SSPF, achromobac  14.5      84  0.0025   15.4   1.6   15    2-16     42-56  (70)
  3 >1o98_A 2,3-bisphosphoglycerat  14.0      90  0.0027   15.3   1.6   13    2-14     72-84  (238)
  4 >3igz_B Cofactor-independent p   9.9 1.5E+02  0.0043   14.3   1.6   13    2-14     72-84  (239)
  5 >2q1f_A Chondroitinase; alpha    9.2   1E+02  0.0031   15.0   0.6   28   10-37    142-169 (175)
  6 >2wyo_A Glutathione synthetase   8.0 1.2E+02  0.0036   14.7   0.5   11   27-37     67-77  (152)
  7 >3kal_A Homoglutathione synthe   7.0 1.6E+02  0.0047   14.2   0.8   10   27-36     16-25  (99)
  8 >3cqx_C BAG family molecular c   5.0 2.6E+02  0.0078   13.2   0.9   11   26-36     63-73  (88)
  9 >2oux_A Magnesium transporter;   4.7 2.4E+02  0.0072   13.3   0.6   20   14-33     24-43  (58)
 10 >3bua_E HSNM1B, DNA cross-LINK   4.7 2.7E+02  0.0081   13.1   0.8   19   16-35     16-34  (36)

No 1  
>>3hr0_A COG4; conserved oligomeric golgi complex, intracellular trafficking, vesicle tethering, multisubunit tethering complex, exocyst; 1.90A {Homo sapiens} (A:94-173)
Probab=19.50  E-value=40  Score=16.88  Aligned_cols=28  Identities=14%  Similarity=0.176  Sum_probs=23.8

Q ss_pred             CCCCHHHHHHHHHHHCCCCHHHHHHHHC
Q ss_conf             6654100764455742221788877525
Q 537021.9.peg.8   10 DTLPLRNFAEYFFLLVNFDQRQIEKRLM   37 (38)
Q Consensus        10 dtlplrnfaeyffllvnfdqrqiekrlm   37 (38)
                      +.|--+||...+-++++.=-+++||++|
T Consensus        50 ~~Lt~~nyd~ll~~~~~~ia~~lEk~i~   77 (80)
T 3hr0_A           50 ASLSPVIYDSLTGLMTSLVAVELEKVVL   77 (80)
T ss_dssp             HHSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9848688999999999999999999998


No 2  
>>2w02_A ACSD; SSPF, achromobactin biosynthesis, metal transport, pectobacterium chrysanthemi; HET: ATP; 2.20A {Erwinia chrysanthemi} PDB: 2w03_A* 2w04_A* 3ffe_A (A:33-102)
Probab=14.50  E-value=84  Score=15.42  Aligned_cols=15  Identities=40%  Similarity=0.744  Sum_probs=11.2

Q ss_pred             EEEECCCCCCCCHHH
Q ss_conf             788618656654100
Q 537021.9.peg.8    2 VFLFSDRRDTLPLRN   16 (38)
Q Consensus         2 vflfsdrrdtlplrn   16 (38)
                      .|..-||||++--..
T Consensus        42 ~FVlVDRRD~lGSqr   56 (70)
T 2w02_A           42 LFVMVDRRDTFGSQH   56 (70)
T ss_dssp             EEEEESSCCSSSCCC
T ss_pred             EEEEEECCCCCCCEE
T ss_conf             999985147757758


No 3  
>>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} (A:75-312)
Probab=14.02  E-value=90  Score=15.27  Aligned_cols=13  Identities=38%  Similarity=0.468  Sum_probs=11.0

Q ss_pred             EEEECCCCCCCCH
Q ss_conf             7886186566541
Q 537021.9.peg.8    2 VFLFSDRRDTLPL   14 (38)
Q Consensus         2 vflfsdrrdtlpl   14 (38)
                      +-+|.|-|||.|-
T Consensus        72 iH~f~DGRDt~P~   84 (238)
T 1o98_A           72 IHGFLDGRDVGPQ   84 (238)
T ss_dssp             EEEEECSSSSCTT
T ss_pred             EEEECCCCCCCCH
T ss_conf             8884146667832


No 4  
>>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* (B:88-326)
Probab=9.91  E-value=1.5e+02  Score=14.32  Aligned_cols=13  Identities=31%  Similarity=0.204  Sum_probs=11.0

Q ss_pred             EEEECCCCCCCCH
Q ss_conf             7886186566541
Q 537021.9.peg.8    2 VFLFSDRRDTLPL   14 (38)
Q Consensus         2 vflfsdrrdtlpl   14 (38)
                      |-.|.|-|||-|-
T Consensus        72 vH~f~DGRDt~P~   84 (239)
T 3igz_B           72 VHALYDGRDVPDG   84 (239)
T ss_dssp             EEEEECSSSSCTT
T ss_pred             EEEEECCCCCCCC
T ss_conf             9998246665751


No 5  
>>2q1f_A Chondroitinase; alpha plus beta, lyase; 2.85A {Bacteroides thetaiotaomicron} (A:416-590)
Probab=9.21  E-value=1e+02  Score=15.01  Aligned_cols=28  Identities=32%  Similarity=0.435  Sum_probs=19.2

Q ss_pred             CCCCHHHHHHHHHHHCCCCHHHHHHHHC
Q ss_conf             6654100764455742221788877525
Q 537021.9.peg.8   10 DTLPLRNFAEYFFLLVNFDQRQIEKRLM   37 (38)
Q Consensus        10 dtlplrnfaeyffllvnfdqrqiekrlm   37 (38)
                      ++-..++++||.--.-+-+++|++|||.
T Consensus       142 ~~~~~~~~~~~~p~~~~a~~~~~~~~l~  169 (175)
T 2q1f_A          142 DSSSAEQAPEYXPKVSNAQERKIAKRLV  169 (175)
T ss_dssp             CC----------CCCCSHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHCCCCCHHHHHHHHHHHH
T ss_conf             5542212200102344267788988765


No 6  
>>2wyo_A Glutathione synthetase; ligase, ATP-grAsp; HET: GTT; 3.15A {Trypanosoma brucei} (A:209-360)
Probab=7.98  E-value=1.2e+02  Score=14.70  Aligned_cols=11  Identities=27%  Similarity=0.335  Sum_probs=8.7

Q ss_pred             CCHHHHHHHHC
Q ss_conf             21788877525
Q 537021.9.peg.8   27 FDQRQIEKRLM   37 (38)
Q Consensus        27 fdqrqiekrlm   37 (38)
                      ||||.+|..|.
T Consensus        67 ~DQr~lE~~L~   77 (152)
T 2wyo_A           67 ADQYALLMRVL   77 (152)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
T ss_conf             87899999888


No 7  
>>3kal_A Homoglutathione synthetase; dimer, ATP-grAsp domain; HET: ADP HGS; 1.90A {Glycine max} PDB: 3kak_A* 3kaj_A* (A:230-328)
Probab=6.98  E-value=1.6e+02  Score=14.15  Aligned_cols=10  Identities=30%  Similarity=0.501  Sum_probs=7.8

Q ss_pred             CCHHHHHHHH
Q ss_conf             2178887752
Q 537021.9.peg.8   27 FDQRQIEKRL   36 (38)
Q Consensus        27 fdqrqiekrl   36 (38)
                      ||||.+|..|
T Consensus        16 ~DQr~le~~L   25 (99)
T 3kal_A           16 YEQHYISALL   25 (99)
T ss_dssp             HHHHHHHHHH
T ss_pred             CCHHHHHHHH
T ss_conf             0069999999


No 8  
>>3cqx_C BAG family molecular chaperone regulator 2; protein-protein complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; 2.30A {Mus musculus} PDB: 3d0t_A (C:)
Probab=4.98  E-value=2.6e+02  Score=13.18  Aligned_cols=11  Identities=45%  Similarity=0.646  Sum_probs=8.5

Q ss_pred             CCCHHHHHHHH
Q ss_conf             22178887752
Q 537021.9.peg.8   26 NFDQRQIEKRL   36 (38)
Q Consensus        26 nfdqrqiekrl   36 (38)
                      -=||..|.|||
T Consensus        63 ldDQKkIKkRL   73 (88)
T 3cqx_C           63 LEDQKKIKRRL   73 (88)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
T ss_conf             96489999999


No 9  
>>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, protein structure initiative, nysgxrc; 2.16A {Enterococcus faecalis V583} (A:1-58)
Probab=4.75  E-value=2.4e+02  Score=13.34  Aligned_cols=20  Identities=30%  Similarity=0.479  Sum_probs=16.2

Q ss_pred             HHHHHHHHHHHCCCCHHHHH
Q ss_conf             10076445574222178887
Q 537021.9.peg.8   14 LRNFAEYFFLLVNFDQRQIE   33 (38)
Q Consensus        14 lrnfaeyffllvnfdqrqie   33 (38)
                      ...|-|.|.-|-++||-++=
T Consensus        24 i~~FReeFL~LH~YDQa~~f   43 (58)
T 2oux_A           24 XNEFRELFLALHIYEQGQFY   43 (58)
T ss_dssp             HHHHHHHHTTSCHHHHHHHH
T ss_pred             HHHHHHHHHHCCHHHHHHHH
T ss_conf             99999999839999999999


No 10 
>>3bua_E HSNM1B, DNA cross-LINK repair 1B protein; TRF2 TRFH domain dimerization domain apollo peptide, alternative splicing, cell cycle; HET: DNA; 2.50A {Homo sapiens} (E:)
Probab=4.69  E-value=2.7e+02  Score=13.11  Aligned_cols=19  Identities=42%  Similarity=0.478  Sum_probs=9.0

Q ss_pred             HHHHHHHHHCCCCHHHHHHH
Q ss_conf             07644557422217888775
Q 537021.9.peg.8   16 NFAEYFFLLVNFDQRQIEKR   35 (38)
Q Consensus        16 nfaeyffllvnfdqrqiekr   35 (38)
                      ||-.--|---|||| |+||-
T Consensus        16 ~f~qa~~ssr~fdq-qveky   34 (36)
T 3bua_E           16 NFFQAGYSSRRFDQ-QVEKY   34 (36)
T ss_pred             HHHHHCCCCCCHHH-HHHHH
T ss_conf             99884323146689-99885


Done!