Query 537021.9.peg.885_1
Match_columns 54
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 01:17:23 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_885.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sfua_ a.4.5.19 (A:) 34L {Yab 16.5 29 0.0021 15.3 1.6 16 18-33 2-17 (70)
2 d1rfxa_ g.77.1.1 (A:) Resistin 14.3 38 0.0027 14.8 1.7 28 20-49 7-34 (89)
3 d1th5a1 d.52.8.1 (A:154-226) N 13.0 20 0.0015 16.2 0.0 11 33-43 46-56 (73)
4 d2dlqa2 g.37.1.1 (A:35-62) GLI 8.9 54 0.0039 14.0 1.0 13 25-37 15-27 (28)
5 d1jp4a_ e.7.1.1 (A:) PIPase {R 8.0 72 0.0052 13.3 1.4 30 17-47 43-72 (304)
6 d1ixsa_ a.5.1.1 (A:) DNA helic 5.6 1E+02 0.0076 12.4 1.3 11 23-33 37-47 (50)
7 d2d6fa2 c.88.1.1 (A:84-435) Gl 5.4 79 0.0058 13.1 0.5 25 18-42 323-347 (352)
8 d1naqa_ d.58.5.2 (A:) Cut A1 { 4.6 1.2E+02 0.0091 12.0 1.7 37 8-44 1-42 (106)
9 d1g0ha_ e.7.1.1 (A:) Archaeal 3.9 1.4E+02 0.01 11.7 2.1 32 16-50 39-70 (252)
10 d1cxzb_ a.2.6.1 (B:) Protein k 3.9 1.4E+02 0.01 11.7 1.9 19 23-41 25-43 (86)
No 1
>d1sfua_ a.4.5.19 (A:) 34L {Yaba-like disease virus, YLDV [TaxId: 132475]}
Probab=16.46 E-value=29 Score=15.35 Aligned_cols=16 Identities=38% Similarity=0.578 Sum_probs=13.7
Q ss_pred EECHHHHHHHHHHHHH
Q ss_conf 6375899999999721
Q 537021.9.peg.8 18 TFNDKKIQELIREELR 33 (54)
Q Consensus 18 tfndkkiqelireelr 33 (54)
+|+|-.|++|.+.++-
T Consensus 2 ~~~~~~i~~lvk~~l~ 17 (70)
T d1sfua_ 2 TVNDAEIFSLVKKEVL 17 (70)
T ss_dssp CCCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
T ss_conf 7318999999999997
No 2
>d1rfxa_ g.77.1.1 (A:) Resistin (ADSF, FIZZ3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=14.26 E-value=38 Score=14.77 Aligned_cols=28 Identities=25% Similarity=0.176 Sum_probs=15.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 758999999997210212002000264211
Q 537021.9.peg.8 20 NDKKIQELIREELRGCMTIKSGILSNRSAK 49 (54)
Q Consensus 20 ndkkiqelireelrgcmtiksgilsnrsak 49 (54)
-||||||+...-.-. +++..-|+-+|.+
T Consensus 7 v~~KIke~~~~l~~~--~~~~~~L~C~SV~ 34 (89)
T d1rfxa_ 7 IDKKIKQDFNSLFPN--AIKNIGLNCWTVS 34 (89)
T ss_dssp HHHHHHHHHHHHHHH--HHTTEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCC--HHHCCCEEEEEEE
T ss_conf 999999999844500--1200434788772
No 3
>d1th5a1 d.52.8.1 (A:154-226) NifU-like protein 1, NIFUL1 {Rice (Oryza sativa) [TaxId: 4530]}
Probab=13.02 E-value=20 Score=16.22 Aligned_cols=11 Identities=9% Similarity=0.075 Sum_probs=6.3
Q ss_pred HHHHHHHHHHC
Q ss_conf 10212002000
Q 537021.9.peg.8 33 RGCMTIKSGIL 43 (54)
Q Consensus 33 rgcmtiksgil 43 (54)
.||||+|.||-
T Consensus 46 ~gC~Tl~~gIe 56 (73)
T d1th5a1 46 AVVRTVRIAVS 56 (73)
T ss_dssp SSSSSHHHHHH
T ss_pred CCCCHHHHHHH
T ss_conf 65103999999
No 4
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=8.89 E-value=54 Score=13.96 Aligned_cols=13 Identities=38% Similarity=0.871 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999997210212
Q 537021.9.peg.8 25 QELIREELRGCMT 37 (54)
Q Consensus 25 qelireelrgcmt 37 (54)
..|+..|-|.||+
T Consensus 15 enllehearncm~ 27 (28)
T d2dlqa2 15 ENLLEHEARNCMN 27 (28)
T ss_dssp HHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHC
T ss_conf 5788899876412
No 5
>d1jp4a_ e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=7.98 E-value=72 Score=13.30 Aligned_cols=30 Identities=23% Similarity=0.197 Sum_probs=23.1
Q ss_pred EEECHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 7637589999999972102120020002642
Q 537021.9.peg.8 17 ITFNDKKIQELIREELRGCMTIKSGILSNRS 47 (54)
Q Consensus 17 itfndkkiqelireelrgcmtiksgilsnrs 47 (54)
.|.-|+++|++|++.|+.... ..+|++.-+
T Consensus 43 VT~aD~~~e~~I~~~L~~~~P-~~~ivgEE~ 72 (304)
T d1jp4a_ 43 QTKADRMVQMSICSSLSRKFP-KLTIIGEED 72 (304)
T ss_dssp ECHHHHHHHHHHHHHHHHHCT-TSEEEESSC
T ss_pred CCHHHHHHHHHHHHHHHHHCC-CCEEEECCC
T ss_conf 559999999999999997789-997983255
No 6
>d1ixsa_ a.5.1.1 (A:) DNA helicase RuvA subunit, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=5.62 E-value=1e+02 Score=12.44 Aligned_cols=11 Identities=45% Similarity=0.857 Sum_probs=8.1
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999721
Q 537021.9.peg.8 23 KIQELIREELR 33 (54)
Q Consensus 23 kiqelireelr 33 (54)
.-|+|||+.|+
T Consensus 37 ~aq~lIr~aL~ 47 (50)
T d1ixsa_ 37 RAQDLIKEALK 47 (50)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHHH
T ss_conf 39999999986
No 7
>d2d6fa2 c.88.1.1 (A:84-435) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=5.36 E-value=79 Score=13.08 Aligned_cols=25 Identities=24% Similarity=0.438 Sum_probs=18.3
Q ss_pred EECHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6375899999999721021200200
Q 537021.9.peg.8 18 TFNDKKIQELIREELRGCMTIKSGI 42 (54)
Q Consensus 18 tfndkkiqelireelrgcmtiksgi 42 (54)
+..-++||++..+.++|-||.+|-+
T Consensus 323 ~~~~~~i~~~f~~~l~GE~t~~~~~ 347 (352)
T d2d6fa2 323 TDDPEMAREMMRENIAGEINERTSI 347 (352)
T ss_dssp CCCHHHHHHHHHSCSSSCCCSSCCG
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 9999999999846578878987740
No 8
>d1naqa_ d.58.5.2 (A:) Cut A1 {Escherichia coli [TaxId: 562]}
Probab=4.57 E-value=1.2e+02 Score=12.04 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=25.0
Q ss_pred CCEEEEEEEEEECHHHH-----HHHHHHHHHHHHHHHHHHCC
Q ss_conf 20257998576375899-----99999972102120020002
Q 537021.9.peg.8 8 SNINLTLTGITFNDKKI-----QELIREELRGCMTIKSGILS 44 (54)
Q Consensus 8 sninltltgitfndkki-----qelireelrgcmtiksgils 44 (54)
||...-+--.||.|+.. +.|+.+.|-.|..|-.++-|
T Consensus 1 s~t~~i~V~tT~p~~~~A~~ia~~ll~~kLaACvni~~~i~S 42 (106)
T d1naqa_ 1 SNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATS 42 (106)
T ss_dssp CCCCEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCEEE
T ss_conf 972399999907999999999999997290999951698579
No 9
>d1g0ha_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=3.89 E-value=1.4e+02 Score=11.74 Aligned_cols=32 Identities=19% Similarity=0.243 Sum_probs=23.2
Q ss_pred EEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 57637589999999972102120020002642113
Q 537021.9.peg.8 16 GITFNDKKIQELIREELRGCMTIKSGILSNRSAKI 50 (54)
Q Consensus 16 gitfndkkiqelireelrgcmtiksgilsnrsaki 50 (54)
-.|--|+.+++.|++.|+. ...+|+|..+..+
T Consensus 39 ~vt~~D~~~e~~i~~~L~~---~~~~iisEE~~~~ 70 (252)
T d1g0ha_ 39 ETEIFDKISEDIALKYLKS---LNVNIVSEELGVI 70 (252)
T ss_dssp EEEHHHHHHHHHHHHHHGG---GTSEEEEGGGEEE
T ss_pred CCHHHHHHHHHHHHHHHHC---CCCCCCCCCCCCC
T ss_conf 0529999999999998632---9976200313345
No 10
>d1cxzb_ a.2.6.1 (B:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.89 E-value=1.4e+02 Score=11.74 Aligned_cols=19 Identities=32% Similarity=0.504 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999972102120020
Q 537021.9.peg.8 23 KIQELIREELRGCMTIKSG 41 (54)
Q Consensus 23 kiqelireelrgcmtiksg 41 (54)
..++.||.+++--|-||.|
T Consensus 25 ~~r~~lr~eI~KELKIKeG 43 (86)
T d1cxzb_ 25 LERERLRREIRKELKLKEG 43 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999868876
Done!