HHsearch alignment of GI: peg_888 and MMDB domain: 3crm_A_1-212_297-323
>3crm_A (A:1-212,A:297-323) TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=99.73 E-value=5.3e-20 Score=151.67 Aligned_cols=128 Identities=26% Similarity=0.357 Sum_probs=118.1
Q ss_pred HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH
Q ss_conf 99963994089789327999996172448899989999999999962235556655311623202357015699999999
Q 537021.9.peg.8 7 QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQRIARALE 86 (217)
Q Consensus 7 e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri~RaLE 86 (217)
.++.+|++||+|||||+|+.++++|.+..|..++..++.++..+...+.+.+++.|+.+||..+..+|++|.+|++|++|
T Consensus 89 ~~~~~~~~~i~~gg~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~e~~~~~~~~rvir~le 168 (239)
T 3crm_A 89 KATARGRIPLLVGGTMLYYKALLEGLADMPGADPEVRAAIEAEAQAEGWEALHRQLAEVDPESAARIHPNDPQRLMRALE 168 (239)
T ss_dssp HHHHTTCEEEEEESCHHHHHHHHCCC------------------------------------------------------
T ss_pred HHHHCCCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHH
T ss_conf 55532565079733358999998399768752177888876300225799999988752503320148654899999999
Q ss_pred HHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 98534887467754154567770010000107867899999997776542
Q 537021.9.peg.8 87 IKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQML 136 (217)
Q Consensus 87 i~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml 136 (217)
++..||++++.+...+..+ +.+++++|++.+||+.|++||+.||..-.
T Consensus 169 i~~~~~~~~s~~~~~~~~~--~~~~~~~i~l~~dr~~L~~rI~~Rv~~~~ 216 (239)
T 3crm_A 169 VYRLGGVSMSDLRRRQSAE--KADFDASGRNQLPYTVAQLAIAPEQHLHW 216 (239)
T ss_dssp ---------------------------------CSEEEEEEEECSSSCEE
T ss_pred HHHHCCCCHHHHHHHCCCC--CCCCCCCCCCCCCCCEEEEEEECCCCCCE
T ss_conf 9984398778998742454--44434444568887558999837788843