HHsearch alignment of GI: peg_888 and MMDB domain: 3crm_A_1-212_297-323

>3crm_A (A:1-212,A:297-323) TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=99.73  E-value=5.3e-20  Score=151.67  Aligned_cols=128  Identities=26%  Similarity=0.357  Sum_probs=118.1

Q ss_pred             HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH
Q ss_conf             99963994089789327999996172448899989999999999962235556655311623202357015699999999
Q 537021.9.peg.8    7 QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQRIARALE   86 (217)
Q Consensus         7 e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri~RaLE   86 (217)
                      .++.+|++||+|||||+|+.++++|.+..|..++..++.++..+...+.+.+++.|+.+||..+..+|++|.+|++|++|
T Consensus        89 ~~~~~~~~~i~~gg~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~rl~~~~~e~~~~~~~~rvir~le  168 (239)
T 3crm_A           89 KATARGRIPLLVGGTMLYYKALLEGLADMPGADPEVRAAIEAEAQAEGWEALHRQLAEVDPESAARIHPNDPQRLMRALE  168 (239)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHCCC------------------------------------------------------
T ss_pred             HHHHCCCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHH
T ss_conf             55532565079733358999998399768752177888876300225799999988752503320148654899999999


Q ss_pred             HHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf             98534887467754154567770010000107867899999997776542
Q 537021.9.peg.8   87 IKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQML  136 (217)
Q Consensus        87 i~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml  136 (217)
                      ++..||++++.+...+..+  +.+++++|++.+||+.|++||+.||..-.
T Consensus       169 i~~~~~~~~s~~~~~~~~~--~~~~~~~i~l~~dr~~L~~rI~~Rv~~~~  216 (239)
T 3crm_A          169 VYRLGGVSMSDLRRRQSAE--KADFDASGRNQLPYTVAQLAIAPEQHLHW  216 (239)
T ss_dssp             ---------------------------------CSEEEEEEEECSSSCEE
T ss_pred             HHHHCCCCHHHHHHHCCCC--CCCCCCCCCCCCCCCEEEEEEECCCCCCE
T ss_conf             9984398778998742454--44434444568887558999837788843