HHsearch results for GI: peg_888 and protein with PDBid: 3eph_A

>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=100.00  E-value=0  Score=403.21  Aligned_cols=211  Identities=22%  Similarity=0.372  Sum_probs=189.6

Q ss_pred             HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHH
Q ss_conf             46899-99963994089789327999996172448899989999999999962235556655311623202357015699
Q 537021.9.peg.8    2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQR   80 (217)
Q Consensus         2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~R   80 (217)
                      +.+.| ++++||++||||||||||++||++|+++.|..++.++.+....++..|.+.+|++|+++||++|+++||||++|
T Consensus        80 a~~~i~~i~~rgk~PIiVGGT~~Yi~aLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~vDP~~A~kihpnd~rR  159 (409)
T 3eph_A           80 CMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRVDTKSSERKLTRKQLDILESTDPDVIYNTLVKCDPDIATKYHPNDYRR  159 (409)
T ss_dssp             HHHHHHHHHTTTCEEEEECSCGGGGGGGGTCSCCCSSSCCCCCHHHHHHHTCSSSSSHHHHHHHSCHHHHTTSCTTCHHH
T ss_pred             HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCHHHH
T ss_conf             99999999862896599888217999997430457410288999999998740499999998602788776349737789


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------
Q ss_conf             9999999853488746775415456777001000010786789999999777654211345677775113863-------
Q 537021.9.peg.8   81 IARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLS-------  153 (217)
Q Consensus        81 i~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~-------  153 (217)
                      |+||||||+.||+++|+++..++..  ..+++++|++.++++.|++||+.||+.|+++||++||+.|++.+..       
T Consensus       160 I~RaLei~~~tG~~~S~~~~~~~~~--~~~~~~~~~l~~~~~~L~~rI~~Rvd~Ml~~Gll~Ev~~l~~~~~~~~~~~~~  237 (409)
T 3eph_A          160 VQRMLEIYYKTGKKPSETFNEQKIT--LKFDTLFLWLYSKPEPLFQRLDDRVDDMLERGALQEIKQLYEYYSQNKFTPEQ  237 (409)
T ss_dssp             HHHHHHHHHHHCSCHHHHHHTCCCC--CSSEEEEEEEECCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTTCCGGG
T ss_pred             HHHHHHHHHHCCCCHHHHHHHCCCC--CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf             9999999981268889996420456--54112110247977889989999999999867699999999733645567210


Q ss_pred             CHHHHHHCCCHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHCCCC------CCCCCCCCCHH
Q ss_conf             101344206856778986789-----99899999999999988888768862888------75311698301
Q 537021.9.peg.8  154 LDLPIMKAIGVRDIIALLKGE-----INYDETLQRGIIATNKYAKRQKTWLCHQF------QADWIRISSID  214 (217)
Q Consensus       154 ~~~~~~~~IGYke~~~yL~g~-----~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~------~~~w~~~~~~d  214 (217)
                      .+.++++||||||+.+||+|+     +++++|++.++.+||||||||+||||+++      +++|+|.++.+
T Consensus       238 ~~~gi~qaIGykE~~~yL~g~~~~~~~~lee~ie~ik~~TrqYAKrQ~tW~r~~~~~~~~~~~~~lD~td~~  309 (409)
T 3eph_A          238 CENGVWQVIGFKEFLPWLTGKTDDNTVKLEDCIERMKTRTRQYAKRQVKWIKKMLIPDIKGDIYLLDATDLS  309 (409)
T ss_dssp             TTSGGGGSTTTGGGGGGGC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTCEEEEECSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHH
T ss_conf             134788884399999997487765635899999999999999999999997036652258874220651477