HHsearch results for GI: peg_888 and protein with PDBid: 3foz_A
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferase; nucleoside modification, isopentenyl-tRNA transferase, MIAA, transferase/RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=100.00 E-value=0 Score=447.18 Aligned_cols=214 Identities=35% Similarity=0.597 Sum_probs=197.4
Q ss_pred HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHH
Q ss_conf 46899-99963994089789327999996172448899989999999999962235556655311623202357015699
Q 537021.9.peg.8 2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQR 80 (217)
Q Consensus 2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~R 80 (217)
+.+.+ +++++|++||||||||||++||++|+++.|++|+.+|.++++.....|.+.+|++|+++||++|++||+||++|
T Consensus 88 a~~~i~~i~~~~k~pIlVGGTglYl~all~g~~~~p~~~~~~r~~~~~~~~~~g~~~l~~~L~~iDp~~a~~i~~nd~~R 167 (316)
T 3foz_A 88 ALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQR 167 (316)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHCCCCCHHH
T ss_conf 99899999965997089735178999998298779999979988765431016999999999973999996159666889
Q ss_pred HHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHH
Q ss_conf 99999998534887467754154567770010000107867899999997776542113456777751138-63101344
Q 537021.9.peg.8 81 IARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMN-LSLDLPIM 159 (217)
Q Consensus 81 i~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~-~~~~~~~~ 159 (217)
|+|||||+..||+++|+|+...+.+ .++..+.++++.+||+.||+||+.||+.|+++||++||+.|++++ ++.+++++
T Consensus 168 i~RAlEv~~~tGk~~s~~~~~~~~~-~~~~~~~i~~~~~~re~L~~rI~~Rv~~Ml~~GlieEv~~L~~~~~~~~~~~~~ 246 (316)
T 3foz_A 168 LSRALEVFFISGKTLTELTQTSGDA-LPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSI 246 (316)
T ss_dssp HHHHHHHHHHHSSCHHHHHTSCCCC-CSSEEEEEEEECSSHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHSCCCTTSTTT
T ss_pred HHHHHHHHHHHCCCHHHHHHCCCCC-CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
T ss_conf 9999999996179878886313788-887633899618999999999999999998740899999999843677431555
Q ss_pred HCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCC
Q ss_conf 206856778986789998999999999999888887688628887531169830104
Q 537021.9.peg.8 160 KAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTWLCHQFQADWIRISSIDDL 216 (217)
Q Consensus 160 ~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w~~~~~~d~i 216 (217)
+||||||+.+||+|+++++++++.++++||||||||+||||++++++|++.++++++
T Consensus 247 ~aIGYkE~~~yL~g~~s~~eaie~i~~~TrqyAKRQ~TWfR~~~~i~wid~~~~~~~ 303 (316)
T 3foz_A 247 RCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQA 303 (316)
T ss_dssp TSTTHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSCSSCEEEETTCHHHH
T ss_pred HEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHH
T ss_conf 413699999998599999999999999999999998898389998758789886899