Query 537021.9.peg.888_1
Match_columns 217
No_of_seqs 126 out of 2919
Neff 6.8
Searched_HMMs 23785
Date Wed May 25 04:07:20 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_888.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3foz_A TRNA delta(2)-isopenten 100.0 0 0 447.2 20.5 214 2-216 88-303 (316)
2 3exa_A TRNA delta(2)-isopenten 100.0 0 0 440.3 20.4 211 2-214 81-293 (322)
3 3crm_A TRNA delta(2)-isopenten 100.0 0 0 447.4 14.2 214 2-215 83-308 (323)
4 3d3q_A TRNA delta(2)-isopenten 100.0 0 0 431.6 18.5 209 2-213 85-298 (340)
5 3eph_A TRNA isopentenyltransfe 100.0 0 0 403.2 13.3 211 2-214 80-309 (409)
6 3a8t_A Adenylate isopentenyltr 100.0 2.8E-42 0 296.5 7.9 156 2-212 119-303 (339)
7 2ze6_A Isopentenyl transferase 99.4 1.2E-13 5.2E-18 109.0 2.9 143 5-152 83-242 (253)
8 2a0m_A Arginase superfamily pr 49.7 6.5 0.00028 19.2 1.9 25 5-29 105-129 (316)
9 3lu1_A WBGU; rossman fold, epi 47.3 12 0.0005 17.5 2.9 27 4-30 30-56 (364)
10 1sxj_A Activator 1 95 kDa subu 44.6 11 0.00045 17.8 2.3 83 4-94 170-261 (516)
11 2p4h_X Vestitone reductase; NA 44.2 6.1 0.00026 19.4 1.0 18 11-29 1-18 (322)
12 3kb2_A SPBC2 prophage-derived 43.7 14 0.00059 17.0 2.8 67 112-186 96-162 (173)
13 3lhl_A Putative agmatinase; pr 42.7 12 0.00051 17.4 2.4 27 5-31 81-107 (287)
14 1dih_A Dihydrodipicolinate red 42.3 13 0.00055 17.2 2.5 24 3-26 86-109 (273)
15 2cev_A Protein (arginase); enz 42.0 10 0.00043 17.9 1.9 27 6-32 83-109 (299)
16 3bqs_A Uncharacterized protein 40.5 19 0.0008 16.1 4.3 53 30-86 4-63 (93)
17 3ijp_A DHPR, dihydrodipicolina 40.4 11 0.00045 17.8 1.8 24 4-27 103-126 (288)
18 2aeb_A Arginase 1; hydrolase, 39.9 12 0.00049 17.5 1.9 26 7-32 86-111 (322)
19 1p9l_A Dihydrodipicolinate red 37.6 18 0.00076 16.3 2.6 24 2-25 58-81 (245)
20 1pq3_A Arginase II, mitochondr 37.1 14 0.00057 17.1 1.9 26 7-32 82-107 (306)
21 3llm_A ATP-dependent RNA helic 36.8 18 0.00076 16.3 2.5 25 114-138 111-135 (235)
22 1gq6_A Proclavaminate amidino 36.6 12 0.00051 17.4 1.6 26 5-30 104-129 (313)
23 1db3_A GDP-mannose 4,6-dehydra 36.4 11 0.00048 17.6 1.4 18 12-29 1-18 (372)
24 1vm6_A DHPR, dihydrodipicolina 36.1 14 0.00057 17.1 1.8 26 3-28 67-92 (228)
25 3mmr_A Arginase; malaria, ABH, 34.6 14 0.00057 17.1 1.6 25 7-31 180-204 (413)
26 1woh_A Agmatinase; alpha/beta 34.4 21 0.0009 15.8 2.6 29 6-34 105-133 (305)
27 1lvg_A Guanylate kinase, GMP k 34.4 16 0.00069 16.6 1.9 75 111-194 117-191 (198)
28 1n7h_A GDP-D-mannose-4,6-dehyd 34.0 14 0.00059 17.0 1.6 35 173-207 336-370 (381)
29 1t2a_A GDP-mannose 4,6 dehydra 34.0 13 0.00055 17.2 1.4 21 9-29 19-41 (375)
30 1knq_A Gluconate kinase; ALFA/ 33.8 24 0.001 15.4 4.1 67 111-188 104-171 (175)
31 2ef5_A Arginase; TTHA1496, str 33.6 10 0.00044 17.8 0.8 26 6-31 80-105 (290)
32 2pt5_A Shikimate kinase, SK; a 33.1 6.2 0.00026 19.3 -0.4 67 112-187 94-160 (168)
33 1u83_A Phosphosulfolactate syn 32.7 25 0.0011 15.3 3.0 77 2-98 82-158 (276)
34 2bka_A CC3, TAT-interacting pr 32.7 25 0.0011 15.3 3.0 27 4-30 9-36 (242)
35 1y1p_A ARII, aldehyde reductas 30.8 17 0.00073 16.4 1.6 20 10-29 9-28 (342)
36 1xrs_B D-lysine 5,6-aminomutas 29.1 22 0.00094 15.7 1.9 21 114-134 162-183 (262)
37 2z1m_A GDP-D-mannose dehydrata 29.0 19 0.00081 16.1 1.6 18 11-28 2-19 (345)
38 3i6i_A Putative leucoanthocyan 28.8 18 0.00077 16.2 1.4 20 10-30 9-28 (346)
39 1e6u_A GDP-fucose synthetase; 27.9 11 0.00048 17.6 0.3 18 11-29 3-20 (321)
40 1pgy_A SWA2P; UBA, ubiquitin, 27.4 22 0.00092 15.7 1.6 40 140-186 2-43 (47)
41 2x6t_A AGME,, ADP-L-glycero-D- 26.9 20 0.00086 15.9 1.4 18 11-28 45-62 (357)
42 2waq_Q DNA-directed RNA polyme 26.6 17 0.00072 16.4 1.0 26 170-195 54-79 (104)
43 1rkx_A CDP-glucose-4,6-dehydra 26.5 26 0.0011 15.2 1.9 21 9-29 6-26 (357)
44 2gn4_A FLAA1 protein, UDP-GLCN 26.1 24 0.00099 15.5 1.6 20 11-30 20-39 (344)
45 2rh8_A Anthocyanidin reductase 25.4 24 0.001 15.4 1.6 20 11-30 8-27 (338)
46 1qyd_A Pinoresinol-lariciresin 25.4 20 0.00083 16.0 1.1 18 11-29 4-21 (313)
47 1qyc_A Phenylcoumaran benzylic 25.4 20 0.00083 16.0 1.1 19 11-30 4-22 (308)
48 2c29_D Dihydroflavonol 4-reduc 25.0 18 0.00074 16.4 0.8 20 10-29 3-22 (337)
49 2qt1_A Nicotinamide riboside k 24.0 32 0.0013 14.6 1.9 71 113-187 132-202 (207)
50 2i2x_B MTAC, methyltransferase 22.6 38 0.0016 14.2 2.3 14 115-128 157-170 (258)
51 2r6j_A Eugenol synthase 1; phe 22.5 26 0.0011 15.2 1.3 19 11-30 11-29 (318)
52 2yy7_A L-threonine dehydrogena 22.4 29 0.0012 14.9 1.5 17 12-29 3-19 (312)
53 1sb8_A WBPP; epimerase, 4-epim 22.4 28 0.0012 15.0 1.4 19 11-29 26-44 (352)
54 2gas_A Isoflavone reductase; N 22.2 27 0.0011 15.1 1.3 19 11-30 2-20 (307)
55 3hkz_Y DNA-directed RNA polyme 22.1 17 0.00073 16.4 0.3 27 169-195 53-79 (104)
56 1qwg_A PSL synthase;, (2R)-pho 21.5 40 0.0017 14.0 6.1 29 2-31 57-85 (251)
57 2jb0_B Colicin E7; hydrolase/i 20.4 42 0.0018 13.9 2.0 47 37-85 30-80 (131)
58 1z45_A GAL10 bifunctional prot 20.1 36 0.0015 14.3 1.6 24 6-29 5-28 (699)
No 1
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferase; nucleoside modification, isopentenyl-tRNA transferase, MIAA, transferase/RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=100.00 E-value=0 Score=447.18 Aligned_cols=214 Identities=35% Similarity=0.597 Sum_probs=197.4
Q ss_pred HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHH
Q ss_conf 46899-99963994089789327999996172448899989999999999962235556655311623202357015699
Q 537021.9.peg.8 2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQR 80 (217)
Q Consensus 2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~R 80 (217)
+.+.+ +++++|++||||||||||++||++|+++.|++|+.+|.++++.....|.+.+|++|+++||++|++||+||++|
T Consensus 88 a~~~i~~i~~~~k~pIlVGGTglYl~all~g~~~~p~~~~~~r~~~~~~~~~~g~~~l~~~L~~iDp~~a~~i~~nd~~R 167 (316)
T 3foz_A 88 ALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQR 167 (316)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHCCCCCHHH
T ss_conf 99899999965997089735178999998298779999979988765431016999999999973999996159666889
Q ss_pred HHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHH
Q ss_conf 99999998534887467754154567770010000107867899999997776542113456777751138-63101344
Q 537021.9.peg.8 81 IARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMN-LSLDLPIM 159 (217)
Q Consensus 81 i~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~-~~~~~~~~ 159 (217)
|+|||||+..||+++|+|+...+.+ .++..+.++++.+||+.||+||+.||+.|+++||++||+.|++++ ++.+++++
T Consensus 168 i~RAlEv~~~tGk~~s~~~~~~~~~-~~~~~~~i~~~~~~re~L~~rI~~Rv~~Ml~~GlieEv~~L~~~~~~~~~~~~~ 246 (316)
T 3foz_A 168 LSRALEVFFISGKTLTELTQTSGDA-LPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSI 246 (316)
T ss_dssp HHHHHHHHHHHSSCHHHHHTSCCCC-CSSEEEEEEEECSSHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHSCCCTTSTTT
T ss_pred HHHHHHHHHHHCCCHHHHHHCCCCC-CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
T ss_conf 9999999996179878886313788-887633899618999999999999999998740899999999843677431555
Q ss_pred HCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCC
Q ss_conf 206856778986789998999999999999888887688628887531169830104
Q 537021.9.peg.8 160 KAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTWLCHQFQADWIRISSIDDL 216 (217)
Q Consensus 160 ~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w~~~~~~d~i 216 (217)
+||||||+.+||+|+++++++++.++++||||||||+||||++++++|++.++++++
T Consensus 247 ~aIGYkE~~~yL~g~~s~~eaie~i~~~TrqyAKRQ~TWfR~~~~i~wid~~~~~~~ 303 (316)
T 3foz_A 247 RCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQA 303 (316)
T ss_dssp TSTTHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSCSSCEEEETTCHHHH
T ss_pred HEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHH
T ss_conf 413699999998599999999999999999999998898389998758789886899
No 2
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=100.00 E-value=0 Score=440.34 Aligned_cols=211 Identities=30% Similarity=0.515 Sum_probs=194.2
Q ss_pred HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHH
Q ss_conf 46899-99963994089789327999996172448-89998999999999996223555665531162320235701569
Q 537021.9.peg.8 2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIM-PEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQ 79 (217)
Q Consensus 2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~-p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~ 79 (217)
+.+.| ++++||++||||||||||++||++|+++. |+.++.++.+++...+..|.+.+|++|+++||++|++||+||++
T Consensus 81 a~~~i~~i~~r~k~PIlVGGTglYl~aLl~g~~~~~~~~~~~~r~~l~~~~~~~g~~~l~~~L~~~Dp~~a~~i~~nd~~ 160 (322)
T 3exa_A 81 ATPLITEIHERGRLPFLVGGTGLYVNAVIHQFNLGDIRADEDYRHELEAFVNSYGVQALHDKLSKIDPKAAAAIHPNNYR 160 (322)
T ss_dssp HHHHHHHHHHTTCEEEEESCCHHHHHHHHHTCCCCCCBCCHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHTTSCTTCHH
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCCCCHH
T ss_conf 99999999976998099948388999998185455445998999999999997283999999987594988633866207
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 99999999853488746775415456777001000010786789999999777654211345677775113863101344
Q 537021.9.peg.8 80 RIARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIM 159 (217)
Q Consensus 80 Ri~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~ 159 (217)
||+|||||+..||+++|+++.+.+.. ...+++++|+|.+||+.||+||++||+.||++||++||+.|+++++ .+.+++
T Consensus 161 Ri~RAlEv~~~tg~~~s~~~~~~~~~-~~~~~~~~i~L~~~r~~L~~rI~~Rv~~Ml~~GlieEv~~L~~~~~-~~~~~~ 238 (322)
T 3exa_A 161 RVIRALEIIKLTGKTVTEQARHEEET-PSPYNLVMIGLTMERDVLYDRINRRVDQMVEEGLIDEAKKLYDRGI-RDCQSV 238 (322)
T ss_dssp HHHHHHHHHHHTC---------------CCSEEEEEEEECCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTC-CSSTGG
T ss_pred HHHHHHHHHHHCCCCHHHHHHCCCCC-CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC-CCCCHH
T ss_conf 89999999997068888986325578-8876438999716558789999999999997786899999986255-545400
Q ss_pred HCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
Q ss_conf 2068567789867899989999999999998888876886288875311698301
Q 537021.9.peg.8 160 KAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTWLCHQFQADWIRISSID 214 (217)
Q Consensus 160 ~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w~~~~~~d 214 (217)
+||||||+.+||+|++++++|++.++++||||||||+||||++++++|++.++.+
T Consensus 239 ~aIGYkE~~~yL~g~~s~ee~ie~i~~~Tr~yAKRQ~TWfR~~~~i~w~d~~~~~ 293 (322)
T 3exa_A 239 QAIGYKEMYDYLDGNVTLEEAIDTLKRNSRRYAKRQLTWFRNKANVTWFDMTDVD 293 (322)
T ss_dssp GSTTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEECTTCC
T ss_pred CEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC
T ss_conf 0022999999986999999999999999999999999981899998265698738
No 3
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=100.00 E-value=0 Score=447.36 Aligned_cols=214 Identities=34% Similarity=0.553 Sum_probs=195.5
Q ss_pred HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHH
Q ss_conf 46899-99963994089789327999996172448899989999999999962235556655311623202357015699
Q 537021.9.peg.8 2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQR 80 (217)
Q Consensus 2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~R 80 (217)
+.+.+ +++++|++||||||||||++||++|+++.|++++++|++++......|.+.+|++|+++||++|++||+||++|
T Consensus 83 a~~~i~~i~~~gk~PIiVGGTglYl~aLl~g~~~~p~~~~~~r~~~~~~~~~~g~~~l~~~L~~iDp~~a~~i~~nd~~R 162 (323)
T 3crm_A 83 ALAAMAKATARGRIPLLVGGTMLYYKALLEGLADMPGADPEVRAAIEAEAQAEGWEALHRQLAEVDPESAARIHPNDPQR 162 (323)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHCCC------------------------------------------------
T ss_pred HHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCCCCHHH
T ss_conf 99999999835994089756139999998399778852166899999986523799999999875909885079665779
Q ss_pred HHHHHHHHHHCCCCHHHHHHHCCCCCC---------CCHHHEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999985348874677541545677---------700100001078-6789999999777654211345677775113
Q 537021.9.peg.8 81 IARALEIKLVSGQSIIEFWKQAPNPFI---------PLESAHKIIILP-ERSALKERIRRRFTQMLESGAIDEIRSLMKM 150 (217)
Q Consensus 81 i~RaLEi~~~tGk~~s~~~~~~~~~~~---------~~~~~~~i~l~~-~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~ 150 (217)
|+|||||+..||+++|+|+.+++.+.. ..+++++|++.+ ||+.||+||+.||+.||++||++||+.|+++
T Consensus 163 i~RAlEv~~~tGk~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~R~~L~~rI~~Rvd~Ml~~GlieEv~~l~~~ 242 (323)
T 3crm_A 163 LMRALEVYRLGGVSMSDLRRRQSAEKADFDASGRNQLPYTVAQLAIAPEQRQVLHARIAQRFRQMLEQGFIAEVEALHAR 242 (323)
T ss_dssp -------------------------------------CSEEEEEEEECSSHHHHHHHHHHHHHHHHHTTHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
T ss_conf 99999999985987799886434554554433345788755899983778999999999999999985769999999862
Q ss_pred C-CCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHC
Q ss_conf 8-6310134420685677898678999899999999999988888768862888753116983010
Q 537021.9.peg.8 151 N-LSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTWLCHQFQADWIRISSIDD 215 (217)
Q Consensus 151 ~-~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w~~~~~~d~ 215 (217)
+ ++.++++++||||||+.+||+|++++++|++.++++||||||||+||||++.+++|++.++.|+
T Consensus 243 ~~~~~~~~~~~aIGYkE~~~yL~g~~s~~e~~e~i~~~TrqyAKRQ~TWfR~~~~i~w~d~~~~~~ 308 (323)
T 3crm_A 243 SDLHAGLPSIRAVGYRQVWDYLDGKLSYAEMTERGIIATRQLAKRQFTWLRSWSHLHWMDSLAGDN 308 (323)
T ss_dssp TTCCTTSSGGGSTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHTCSSCEEEETTCSCH
T ss_pred CCCCCCCCHHHEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHH
T ss_conf 368878835533349999999859999999999999999999989999848999881347988157
No 4
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=100.00 E-value=0 Score=431.62 Aligned_cols=209 Identities=27% Similarity=0.418 Sum_probs=186.2
Q ss_pred HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHCCHHHHCCCCCH
Q ss_conf 46899-9996399408978932799999617244889998999999999----996223555665531162320235701
Q 537021.9.peg.8 2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREK----LKQYGSHILHDELSSLDSIVARQIHPS 76 (217)
Q Consensus 2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~----~~~~g~~~l~~~L~~~DP~~a~~i~~n 76 (217)
+.+.| +++++|++||||||||||++||++|+++.|..++..+...... .+..|++.||++|+++||++|++||+|
T Consensus 85 a~~~i~~i~~~~kiPIlVGGTglYi~all~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~~~L~~~Dp~~a~~i~~n 164 (340)
T 3d3q_A 85 AEKYIKDITRRGKVPIIAGGTGLYIQSLLYNYAFEDESISEDKMKQVKLKLKELEHLNNNKLHEYLASFDKESAKDIHPN 164 (340)
T ss_dssp HHHHHHHHHHTTCEEEEECCCHHHHHHHHBCSCCC---CCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHCHHHHHHSCTT
T ss_pred HHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999975997199817088999998487755678857788999998888987369999999983259999736966
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 56999999999853488746775415456777001000010786789999999777654211345677775113863101
Q 537021.9.peg.8 77 DGQRIARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDL 156 (217)
Q Consensus 77 d~~Ri~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~ 156 (217)
|++||+|||||+..||+++|++...... ...+++++|+|.+||+.||+||+.||+.|+++||++||+.|+++|+ .+.
T Consensus 165 d~rRi~RalEi~~~tgk~~s~~~~~~~~--~~~~~~~~i~L~~~r~~L~~rI~~Rvd~Ml~~GlleEv~~L~~~~~-~~~ 241 (340)
T 3d3q_A 165 NRKRVLRAIEYYLKTKKLLSSRKKVQQF--TENYDTLLIGIEMSRETLYLRINKRVDIMLGHGLFNEVQHLVEQGF-EAS 241 (340)
T ss_dssp CHHHHHHHHHHHHHHCSCSHHHHHHHHH--SBCSEEEEEEEECCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTC-TTS
T ss_pred CCCHHHHHHHHHHHHCCCHHHHHCCCCC--CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC-CCC
T ss_conf 6306789999999828842444213677--7886644011476799999999999999998788999999997489-966
Q ss_pred HHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf 344206856778986789998999999999999888887688628887531169830
Q 537021.9.peg.8 157 PIMKAIGVRDIIALLKGEINYDETLQRGIIATNKYAKRQKTWLCHQFQADWIRISSI 213 (217)
Q Consensus 157 ~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w~~~~~~ 213 (217)
++++||||||+.+||+|++++++|++.++++||||||||+||||++++++|+++++.
T Consensus 242 ~~~kaIGYkE~~~yL~g~islee~ie~i~~~TrqyAKRQ~TWfR~~~~i~w~d~~~~ 298 (340)
T 3d3q_A 242 QSMQAIGYKELVPVIKGNISMENAVEKLKQHSRQYAKRQLTWFKNKMNVHWLNKERM 298 (340)
T ss_dssp SGGGSTTTTTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEETTTC
T ss_pred CCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
T ss_conf 000346099999998699999999999999999999999998089999916688856
No 5
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=100.00 E-value=0 Score=403.21 Aligned_cols=211 Identities=22% Similarity=0.372 Sum_probs=189.6
Q ss_pred HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHH
Q ss_conf 46899-99963994089789327999996172448899989999999999962235556655311623202357015699
Q 537021.9.peg.8 2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQR 80 (217)
Q Consensus 2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~R 80 (217)
+.+.| ++++||++||||||||||++||++|+++.|..++.++.+....++..|.+.+|++|+++||++|+++||||++|
T Consensus 80 a~~~i~~i~~rgk~PIiVGGT~~Yi~aLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~vDP~~A~kihpnd~rR 159 (409)
T 3eph_A 80 CMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRVDTKSSERKLTRKQLDILESTDPDVIYNTLVKCDPDIATKYHPNDYRR 159 (409)
T ss_dssp HHHHHHHHHTTTCEEEEECSCGGGGGGGGTCSCCCSSSCCCCCHHHHHHHTCSSSSSHHHHHHHSCHHHHTTSCTTCHHH
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHCCCCHHHH
T ss_conf 99999999862896599888217999997430457410288999999998740499999998602788776349737789
Q ss_pred HHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------
Q ss_conf 9999999853488746775415456777001000010786789999999777654211345677775113863-------
Q 537021.9.peg.8 81 IARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLS------- 153 (217)
Q Consensus 81 i~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~------- 153 (217)
|+||||||+.||+++|+++..++.. ..+++++|++.++++.|++||+.||+.|+++||++||+.|++.+..
T Consensus 160 I~RaLei~~~tG~~~S~~~~~~~~~--~~~~~~~~~l~~~~~~L~~rI~~Rvd~Ml~~Gll~Ev~~l~~~~~~~~~~~~~ 237 (409)
T 3eph_A 160 VQRMLEIYYKTGKKPSETFNEQKIT--LKFDTLFLWLYSKPEPLFQRLDDRVDDMLERGALQEIKQLYEYYSQNKFTPEQ 237 (409)
T ss_dssp HHHHHHHHHHHCSCHHHHHHTCCCC--CSSEEEEEEEECCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTTCCGGG
T ss_pred HHHHHHHHHHCCCCHHHHHHHCCCC--CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999999981268889996420456--54112110247977889989999999999867699999999733645567210
Q ss_pred CHHHHHHCCCHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHCCCC------CCCCCCCCCHH
Q ss_conf 101344206856778986789-----99899999999999988888768862888------75311698301
Q 537021.9.peg.8 154 LDLPIMKAIGVRDIIALLKGE-----INYDETLQRGIIATNKYAKRQKTWLCHQF------QADWIRISSID 214 (217)
Q Consensus 154 ~~~~~~~~IGYke~~~yL~g~-----~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~------~~~w~~~~~~d 214 (217)
.+.++++||||||+.+||+|+ +++++|++.++.+||||||||+||||+++ +++|+|.++.+
T Consensus 238 ~~~gi~qaIGykE~~~yL~g~~~~~~~~lee~ie~ik~~TrqYAKrQ~tW~r~~~~~~~~~~~~~lD~td~~ 309 (409)
T 3eph_A 238 CENGVWQVIGFKEFLPWLTGKTDDNTVKLEDCIERMKTRTRQYAKRQVKWIKKMLIPDIKGDIYLLDATDLS 309 (409)
T ss_dssp TTSGGGGSTTTGGGGGGGC-------CCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTCEEEEECSCTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHH
T ss_conf 134788884399999997487765635899999999999999999999997036652258874220651477
No 6
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=100.00 E-value=2.8e-42 Score=296.51 Aligned_cols=156 Identities=21% Similarity=0.229 Sum_probs=125.3
Q ss_pred HHHHH-HHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHH
Q ss_conf 46899-99963994089789327999996172448899989999999999962235556655311623202357015699
Q 537021.9.peg.8 2 LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQR 80 (217)
Q Consensus 2 ~~k~~-e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~R 80 (217)
+.+.| ++++||++||||||||||++||++|. +|+.+|+++++.. .+..+
T Consensus 119 A~~~I~~i~~rgkiPIlVGGTglYl~ALL~g~--l~~~dP~i~~e~~---------------------------~~~~~- 168 (339)
T 3a8t_A 119 AGKAVSEITGRRKLPVLVGGSNSFIHALLVDR--FDSSGPGVFEEGS---------------------------HSVVS- 168 (339)
T ss_dssp HHHHHHHHHHTTCEEEEECCCHHHHHHHHBSS--CCTTCC----------------------------------------
T ss_pred HHHHHHHHHHCCCCEEEECCCHHHHHHHHCCC--CCCCCHHHHHHHC---------------------------HHHHH-
T ss_conf 99999999848996499757207889886387--7788989999855---------------------------14344-
Q ss_pred HHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CC
Q ss_conf 99999998534887467754154567770010000107867899999997776542113456777751138-------63
Q 537021.9.peg.8 81 IARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMN-------LS 153 (217)
Q Consensus 81 i~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~-------~~ 153 (217)
. ...+++++|+|++||+.|++||++||+.|+++||++||+.|++.+ ..
T Consensus 169 ---------------------~----~lr~~~~~i~L~~~r~~L~~RI~~Rvd~Ml~~GlleEv~~L~~~~~~~~~~~~~ 223 (339)
T 3a8t_A 169 ---------------------S----ELRYDCCFLWVDVSVKVLTDYLAKRVDDMLELGMFDELAEFYSPEDEDHDEDSA 223 (339)
T ss_dssp --------------------------CBSSEEEEEEEECCHHHHHHHHHHHHHHHHHHTHHHHHHHHCCTTCSCTTSCGG
T ss_pred ---------------------H----HHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC
T ss_conf ---------------------4----421563589951999999999999999999772999999998620201234555
Q ss_pred CHHHHHHCCCHHHHHHHHCC-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC----CCCCC
Q ss_conf 10134420685677898678-----------------9998999999999999888887688628887531----16983
Q 537021.9.peg.8 154 LDLPIMKAIGVRDIIALLKG-----------------EINYDETLQRGIIATNKYAKRQKTWLCHQFQADW----IRISS 212 (217)
Q Consensus 154 ~~~~~~~~IGYke~~~yL~g-----------------~~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w----~~~~~ 212 (217)
.+.++++||||||+.+||+| +.+++++++.++++||||||||+||||+...+.| +|.++
T Consensus 224 ~~~~~~qaIGYkE~~~yL~g~~~~~~~~~~~~~~~~~~~sleeaie~ik~~TrqYAKRQ~TWfRr~~~~~W~~~~~Da~~ 303 (339)
T 3a8t_A 224 TRTGLRKAIGVPEFDRYFEKFRPGDVEGEDPGRDRVRRGAFEEAVRAIKENTCHLAKRQIGKILRLKGAGWDLRRLDATE 303 (339)
T ss_dssp GSCGGGGSTTHHHHHHHHHHSCTTCCCCSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECHH
T ss_pred CCCCCHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
T ss_conf 45672012378999999836453211111001234567669999999999999999999999676876898655651652
No 7
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis, plasmid; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=99.37 E-value=1.2e-13 Score=108.98 Aligned_cols=143 Identities=14% Similarity=0.072 Sum_probs=91.3
Q ss_pred HHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHH-----------HH----HHHHHH-HHHHHHHHHHHHHCCHH
Q ss_conf 999996399408978932799999617244889998999-----------99----999999-62235556655311623
Q 537021.9.peg.8 5 KLQRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIR-----------EK----IREKLK-QYGSHILHDELSSLDSI 68 (217)
Q Consensus 5 ~~e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir-----------~~----~~~~~~-~~g~~~l~~~L~~~DP~ 68 (217)
..+++++|++||+|||||||++||++|....|.++..++ .+ +...+. ..+...+..++..+++.
T Consensus 83 i~~~~~~~~~pIlvGGTglY~~al~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~~~l~~~~~~~~~~~el~~~~~~ 162 (253)
T 2ze6_A 83 EVDWRKSEEGLILEGGSISLLNCMAKSPFWRSGFQWHVKRLRLGDSDAFLTRAKQRVAEMFAIREDRPSLLEELAELWNY 162 (253)
T ss_dssp HHHTTTTSSEEEEEECCHHHHHHHHHCTTTTSSCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCSSSCCHHHHHHHHHTS
T ss_pred HHHHHHCCCCEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
T ss_conf 99999669988998885999999984996676667888760247667789999999998645450067899999997178
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHEEEEECCCHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf 202357015699999999985348874677541545677700100001078678999999977-7654211345677775
Q 537021.9.peg.8 69 VARQIHPSDGQRIARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKIIILPERSALKERIRRR-FTQMLESGAIDEIRSL 147 (217)
Q Consensus 69 ~a~~i~~nd~~Ri~RaLEi~~~tGk~~s~~~~~~~~~~~~~~~~~~i~l~~~r~~L~~rI~~R-~~~Ml~~GlieEv~~L 147 (217)
.......++..+..++++.+..++.++..+..... .... ..+--..++...+.++..| ++.|+++|.++||-..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~li~~i~~~~~~~~~~qer~f~~m~e~Ga~~~V~~~ 237 (253)
T 2ze6_A 163 PAARPILEDIDGYRCAIRFARKHDLAISQLPNIDA----GRHV-ELIEAIANEYLEHALSQERDFPQWPEDGAGQPVCPV 237 (253)
T ss_dssp TTHHHHHTTSTTHHHHHHHHHHHTCCGGGGGGCCT----THHH-HHHHHHHHHHHHHHHHHHHHSCCCCC----------
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCH----HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
T ss_conf 14212400121179999999980898788986266----7899-999999999999999987512678766770402699
Q ss_pred HHCCC
Q ss_conf 11386
Q 537021.9.peg.8 148 MKMNL 152 (217)
Q Consensus 148 ~~~~~ 152 (217)
....+
T Consensus 238 ~~~~~ 242 (253)
T 2ze6_A 238 TLTRI 242 (253)
T ss_dssp -----
T ss_pred HHHHH
T ss_conf 99998
No 8
>2a0m_A Arginase superfamily protein; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.60A {Trypanosoma cruzi} SCOP: c.42.1.1
Probab=49.69 E-value=6.5 Score=19.15 Aligned_cols=25 Identities=12% Similarity=0.184 Sum_probs=17.3
Q ss_pred HHHHHHCCCCEEEECCCCHHHHHHH
Q ss_conf 9999963994089789327999996
Q 537021.9.peg.8 5 KLQRYKKRFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 5 ~~e~~~r~kiPIiVGGTglY~~all 29 (217)
..+++++|++||++||.+-=.-+++
T Consensus 105 v~~i~~~g~~Pi~lGGdHsis~~~~ 129 (316)
T 2a0m_A 105 VFTVLARGAFPFVIGGGNDQSAPNG 129 (316)
T ss_dssp HHHHHHTTCEEEEEESCGGGHHHHH
T ss_pred HHHHHHCCCEEEEECCCCHHHHHHH
T ss_conf 9999978996899568836758988
No 9
>3lu1_A WBGU; rossman fold, epimerase, lipopolysaccharide, glycan, NADH, U glcnac, isomerase; HET: NAD UD2; 2.50A {Plesiomonas shigelloides}
Probab=47.29 E-value=12 Score=17.45 Aligned_cols=27 Identities=19% Similarity=-0.031 Sum_probs=19.6
Q ss_pred HHHHHHHCCCCEEEECCCCHHHHHHHC
Q ss_conf 899999639940897893279999961
Q 537021.9.peg.8 4 KKLQRYKKRFLPIIVGGTGLYFRALTG 30 (217)
Q Consensus 4 k~~e~~~r~kiPIiVGGTglY~~all~ 30 (217)
...++.-++|.-+|+|||||==.+|+.
T Consensus 30 ~~~~~~~~~K~ILVTGgtGfIGs~lv~ 56 (364)
T 3lu1_A 30 ITQQLIFSPKTWLITGVAGFIGSNLLE 56 (364)
T ss_dssp HHHHHHHSCCEEEEETTTSHHHHHHHH
T ss_pred HHHHHCCCCCEEEEECCCCHHHHHHHH
T ss_conf 999735589989996887589999999
No 10
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ ATPase, DNA polymerase; HET: ATG ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=44.61 E-value=11 Score=17.78 Aligned_cols=83 Identities=12% Similarity=0.077 Sum_probs=36.3
Q ss_pred HHHHHHHCCCCEEEECCCCHHHHH---H---HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC---CC
Q ss_conf 899999639940897893279999---9---61724488999899999999999622355566553116232023---57
Q 537021.9.peg.8 4 KKLQRYKKRFLPIIVGGTGLYFRA---L---TGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQ---IH 74 (217)
Q Consensus 4 k~~e~~~r~kiPIiVGGTglY~~a---l---l~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~---i~ 74 (217)
..++.....+.||++=.+-.+... + ..-+.+.|....++...+.......+. ++|++.... ..
T Consensus 170 ~l~~~~~~~~~piI~i~n~~~~~~i~~l~~r~~~I~F~~p~~~~i~~~l~~I~~~E~i--------~i~~~~l~~I~~~s 241 (516)
T 1sxj_A 170 QLAQFCRKTSTPLILICNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKF--------KLDPNVIDRLIQTT 241 (516)
T ss_dssp HHHHHHHHCSSCEEEEESCTTSSTTGGGTTTSEEEECCCCCHHHHHHHHHHHHHHHTC--------CCCTTHHHHHHHHT
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC--------CCCHHHHHHHHHHC
T ss_conf 9998630234316888448744342443451489844799999999999999997499--------99755899999983
Q ss_pred CHHHHHHHHHHHHHHHCCCC
Q ss_conf 01569999999998534887
Q 537021.9.peg.8 75 PSDGQRIARALEIKLVSGQS 94 (217)
Q Consensus 75 ~nd~~Ri~RaLEi~~~tGk~ 94 (217)
.+|.|+++..|+.+..+++.
T Consensus 242 ~GDIR~aIn~Lq~~~~~~k~ 261 (516)
T 1sxj_A 242 RGDIRQVINLLSTISTTTKT 261 (516)
T ss_dssp TTCHHHHHHHHTHHHHHSSC
T ss_pred CCCHHHHHHHHHHHHHCCCC
T ss_conf 99899999999999965998
No 11
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=44.19 E-value=6.1 Score=19.37 Aligned_cols=18 Identities=28% Similarity=0.377 Sum_probs=13.0
Q ss_pred CCCCEEEECCCCHHHHHHH
Q ss_conf 3994089789327999996
Q 537021.9.peg.8 11 KRFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 11 r~kiPIiVGGTglY~~all 29 (217)
|||| +|+|||||==.+|+
T Consensus 1 k~rI-LVTG~tGfIG~~l~ 18 (322)
T 2p4h_X 1 KGRV-CVTGGTGFLGSWII 18 (322)
T ss_dssp CCEE-EEESTTSHHHHHHH
T ss_pred CCEE-EEECCCCHHHHHHH
T ss_conf 9969-99899878999999
No 12
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} PDB: 2axp_A*
Probab=43.70 E-value=14 Score=16.97 Aligned_cols=67 Identities=24% Similarity=0.319 Sum_probs=42.6
Q ss_pred HEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 000010786789999999777654211345677775113863101344206856778986789998999999999
Q 537021.9.peg.8 112 AHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGII 186 (217)
Q Consensus 112 ~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~ 186 (217)
.++|+|.++.+.+.+||..|-....+..-++++...+...+. +.+ ...+ ..=.+..|.+|..+.|..
T Consensus 96 dl~IyL~~~~e~~~~Ri~~R~~~~~~~~~~~~i~~~~~e~~~-~~~-~~~~------~idt~~~s~eev~~~Ii~ 162 (173)
T 3kb2_A 96 AKVVYLHADPSVIKKRLRVRGDEYIEGKDIDSILELYREVMS-NAG-LHTY------SWDTGQWSSDEIAKDIIF 162 (173)
T ss_dssp EEEEEEECCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHH-TCS-SCEE------EEETTTSCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC-CCC-CCEE------EEECCCCCHHHHHHHHHH
T ss_conf 789995599999999998537642024657799999999860-366-6559------988999999999999999
No 13
>3lhl_A Putative agmatinase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.30A {Clostridium difficile}
Probab=42.71 E-value=12 Score=17.39 Aligned_cols=27 Identities=15% Similarity=0.244 Sum_probs=18.8
Q ss_pred HHHHHHCCCCEEEECCCCHHHHHHHCC
Q ss_conf 999996399408978932799999617
Q 537021.9.peg.8 5 KLQRYKKRFLPIIVGGTGLYFRALTGQ 31 (217)
Q Consensus 5 ~~e~~~r~kiPIiVGGTglY~~all~g 31 (217)
..+++++|++||++||-+----+.+.+
T Consensus 81 v~~~l~~~~~pi~lGGdHsit~~~~~a 107 (287)
T 3lhl_A 81 TYKIVRDSKVPFMIGGEHLVTLPAFKA 107 (287)
T ss_dssp HHHHHHTTCEEEEEESSGGGHHHHHHH
T ss_pred HHHHHHCCCCEEEECCCCCCCHHHHHH
T ss_conf 999995798169978766452167899
No 14
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=42.27 E-value=13 Score=17.19 Aligned_cols=24 Identities=17% Similarity=0.187 Sum_probs=16.9
Q ss_pred HHHHHHHHCCCCEEEECCCCHHHH
Q ss_conf 689999963994089789327999
Q 537021.9.peg.8 3 SKKLQRYKKRFLPIIVGGTGLYFR 26 (217)
Q Consensus 3 ~k~~e~~~r~kiPIiVGGTglY~~ 26 (217)
.+.++...+.++|+|+|=||+=-+
T Consensus 86 ~~~~~~~~~~~~p~ViGTTG~~~~ 109 (273)
T 1dih_A 86 LNHLAFCRQHGKGMVIGTTGFDEA 109 (273)
T ss_dssp HHHHHHHHHTTCEEEECCCCCCHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCH
T ss_conf 999999996287679954798601
No 15
>2cev_A Protein (arginase); enzyme, hydrolase, arginine hydrolysis, nitrogen metabolism, manganese metalloenzyme; 2.15A {Bacillus caldovelox} SCOP: c.42.1.1 PDB: 1cev_A 3cev_A* 4cev_A 5cev_A*
Probab=41.99 E-value=10 Score=17.86 Aligned_cols=27 Identities=15% Similarity=0.204 Sum_probs=19.8
Q ss_pred HHHHHCCCCEEEECCCCHHHHHHHCCC
Q ss_conf 999963994089789327999996172
Q 537021.9.peg.8 6 LQRYKKRFLPIIVGGTGLYFRALTGQL 32 (217)
Q Consensus 6 ~e~~~r~kiPIiVGGTglY~~all~g~ 32 (217)
.+++++|++||++||-+----+.+.++
T Consensus 83 ~~~~~~g~~pi~lGGdHsit~~~~~a~ 109 (299)
T 2cev_A 83 DQVVQRGRFPLVLGGDHSIAIGTLAGV 109 (299)
T ss_dssp HHHHHTTCEEEEEESSGGGHHHHHHHH
T ss_pred HHHHHCCCEEEEECCCCCCCHHHHHHH
T ss_conf 999966985898368765225567899
No 16
>3bqs_A Uncharacterized protein; 10114F, NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.42A {Listeria monocytogenes str} PDB: 3bqt_A 3mab_A
Probab=40.54 E-value=19 Score=16.14 Aligned_cols=53 Identities=23% Similarity=0.251 Sum_probs=37.3
Q ss_pred CCCCCCCCCCHHHHHHHH-------HHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH
Q ss_conf 172448899989999999-------999962235556655311623202357015699999999
Q 537021.9.peg.8 30 GQLSIMPEIPTAIREKIR-------EKLKQYGSHILHDELSSLDSIVARQIHPSDGQRIARALE 86 (217)
Q Consensus 30 ~g~~~~p~~~~~ir~~~~-------~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri~RaLE 86 (217)
..+..+|.+.+.+.+.+. +.+...|...+|.+|++.++. .+.+--+-+..|++
T Consensus 4 ~~L~~LPNig~~~e~~L~~iGI~~~~~L~~~ga~~~y~rLk~~~~~----~~~~~L~aL~gAl~ 63 (93)
T 3bqs_A 4 ANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWENDSS----VCMSELYALEGAVQ 63 (93)
T ss_dssp SCGGGSTTCCHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHTTCTT----CCHHHHHHHHHHHH
T ss_pred HHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHCCC----CCHHHHHHHHHHHC
T ss_conf 7772489999999999999399989999867999999999986899----60999999999994
No 17
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=40.37 E-value=11 Score=17.78 Aligned_cols=24 Identities=21% Similarity=0.138 Sum_probs=16.4
Q ss_pred HHHHHHHCCCCEEEECCCCHHHHH
Q ss_conf 899999639940897893279999
Q 537021.9.peg.8 4 KKLQRYKKRFLPIIVGGTGLYFRA 27 (217)
Q Consensus 4 k~~e~~~r~kiPIiVGGTglY~~a 27 (217)
..++...+.++|+|+|-||+.-..
T Consensus 103 ~~~~~~~~~~~plViGTTG~~~~~ 126 (288)
T 3ijp_A 103 LYANYAAQKSLIHIIGTTGFSKTE 126 (288)
T ss_dssp HHHHHHHHHTCEEEECCCCCCHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCHHH
T ss_conf 899999873960798305544225
No 18
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibitor, perfectly twinned crystal; HET: AB5; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 3gmz_A 3gn0_A* 3kv2_A* 3lp4_A* 3lp7_A* 3mfv_A* 3mfw_A* 3mjl_A 1wvb_A* 3e6v_A* 3e6k_A* 1d3v_A* 1hq5_A* ...
Probab=39.88 E-value=12 Score=17.52 Aligned_cols=26 Identities=12% Similarity=0.112 Sum_probs=19.8
Q ss_pred HHHHCCCCEEEECCCCHHHHHHHCCC
Q ss_conf 99963994089789327999996172
Q 537021.9.peg.8 7 QRYKKRFLPIIVGGTGLYFRALTGQL 32 (217)
Q Consensus 7 e~~~r~kiPIiVGGTglY~~all~g~ 32 (217)
++.++|++||++||-+--.-+.+.|+
T Consensus 86 ~i~~~g~~pi~lGGdHsit~~~~~a~ 111 (322)
T 2aeb_A 86 EVKKNGRISLVLGGDHSLAIGSISGH 111 (322)
T ss_dssp HHHHTTCEEEEEESCGGGHHHHHHHH
T ss_pred HHHHCCCEEEEECCCCCCCCCHHHHH
T ss_conf 99967975899746887642035678
No 19
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=37.59 E-value=18 Score=16.26 Aligned_cols=24 Identities=21% Similarity=0.223 Sum_probs=18.6
Q ss_pred HHHHHHHHHCCCCEEEECCCCHHH
Q ss_conf 468999996399408978932799
Q 537021.9.peg.8 2 LSKKLQRYKKRFLPIIVGGTGLYF 25 (217)
Q Consensus 2 ~~k~~e~~~r~kiPIiVGGTglY~ 25 (217)
+...++.....++|+|+|=||+.-
T Consensus 58 ~~~~~~~~~~~~~plViGTTG~~~ 81 (245)
T 1p9l_A 58 VMGNLEFLIDNGIHAVVGTTGFTA 81 (245)
T ss_dssp HHHHHHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHHHHHCCCEEEEECCCCCH
T ss_conf 999999999729479998898877
No 20
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1
Probab=37.11 E-value=14 Score=17.06 Aligned_cols=26 Identities=8% Similarity=0.063 Sum_probs=20.0
Q ss_pred HHHHCCCCEEEECCCCHHHHHHHCCC
Q ss_conf 99963994089789327999996172
Q 537021.9.peg.8 7 QRYKKRFLPIIVGGTGLYFRALTGQL 32 (217)
Q Consensus 7 e~~~r~kiPIiVGGTglY~~all~g~ 32 (217)
++.++|++||++||.+----+.+.++
T Consensus 82 ~~~~~g~~pivlGGdHsis~~~~~a~ 107 (306)
T 1pq3_A 82 RAVSDGYSCVTLGGDHSLAIGTISGH 107 (306)
T ss_dssp HHHHTTCEEEEEESSGGGHHHHHHHH
T ss_pred HHHHCCCCEEEECCCCCCCCCHHHHH
T ss_conf 99968994267457876540048999
No 21
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=36.81 E-value=18 Score=16.26 Aligned_cols=25 Identities=12% Similarity=0.122 Sum_probs=15.3
Q ss_pred EEEECCCHHHHHHHHHHHHHHHHHH
Q ss_conf 0010786789999999777654211
Q 537021.9.peg.8 114 KIIILPERSALKERIRRRFTQMLES 138 (217)
Q Consensus 114 ~i~l~~~r~~L~~rI~~R~~~Ml~~ 138 (217)
.+++..||...-..+..|+-.....
T Consensus 111 ~I~~tqPRR~aa~s~A~rva~e~~~ 135 (235)
T 3llm_A 111 NIVVTQPRRISAVSVAERVAFERGE 135 (235)
T ss_dssp EEEEEESSHHHHHHHHHHHHHTTTC
T ss_pred EEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf 5999637379999999999998289
No 22
>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibiotic; 1.75A {Streptomyces clavuligerus} SCOP: c.42.1.1 PDB: 1gq7_A
Probab=36.63 E-value=12 Score=17.41 Aligned_cols=26 Identities=15% Similarity=0.018 Sum_probs=18.4
Q ss_pred HHHHHHCCCCEEEECCCCHHHHHHHC
Q ss_conf 99999639940897893279999961
Q 537021.9.peg.8 5 KLQRYKKRFLPIIVGGTGLYFRALTG 30 (217)
Q Consensus 5 ~~e~~~r~kiPIiVGGTglY~~all~ 30 (217)
..++++.|++||+.||-+--.-+.+.
T Consensus 104 v~~~~~~~~~pi~LGGdHsit~~~~~ 129 (313)
T 1gq6_A 104 LSGLLKANAAFLMIGGDHSLTVAALR 129 (313)
T ss_dssp HHHHHHHSSEEEEEESCGGGHHHHHH
T ss_pred HHHHHHCCCEEEEECCCCCCCCCCHH
T ss_conf 99998448705885887422322067
No 23
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=36.39 E-value=11 Score=17.57 Aligned_cols=18 Identities=28% Similarity=0.194 Sum_probs=13.2
Q ss_pred CCCEEEECCCCHHHHHHH
Q ss_conf 994089789327999996
Q 537021.9.peg.8 12 RFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 12 ~kiPIiVGGTglY~~all 29 (217)
.|+.+|+|||||==..|+
T Consensus 1 ~k~~LVTGatGfiG~~L~ 18 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLA 18 (372)
T ss_dssp CCEEEEETTTSHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHH
T ss_conf 988999488878999999
No 24
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, JCSG, protein structure initiative, PSI; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=36.06 E-value=14 Score=17.07 Aligned_cols=26 Identities=27% Similarity=0.259 Sum_probs=19.2
Q ss_pred HHHHHHHHCCCCEEEECCCCHHHHHH
Q ss_conf 68999996399408978932799999
Q 537021.9.peg.8 3 SKKLQRYKKRFLPIIVGGTGLYFRAL 28 (217)
Q Consensus 3 ~k~~e~~~r~kiPIiVGGTglY~~al 28 (217)
.+.++...+.++|+|+|=||+--..+
T Consensus 67 ~~~l~~~~~~~~plViGTTG~~~~~~ 92 (228)
T 1vm6_A 67 PKTVDLCKKYRAGLVLGTTALKEEHL 92 (228)
T ss_dssp HHHHHHHHHHTCEEEECCCSCCHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCHHHH
T ss_conf 55689998638764998068887899
No 25
>3mmr_A Arginase; malaria, ABH, LCR, parasite, L-arginine, boronic acid, metallohydrolase, binuclear, manganese, hydrolase; HET: ABH; 2.14A {Plasmodium falciparum 3D7}
Probab=34.57 E-value=14 Score=17.08 Aligned_cols=25 Identities=12% Similarity=0.068 Sum_probs=17.1
Q ss_pred HHHHCCCCEEEECCCCHHHHHHHCC
Q ss_conf 9996399408978932799999617
Q 537021.9.peg.8 7 QRYKKRFLPIIVGGTGLYFRALTGQ 31 (217)
Q Consensus 7 e~~~r~kiPIiVGGTglY~~all~g 31 (217)
++.++|++||+.||-+----..+.|
T Consensus 180 ~~l~~g~~PIvLGGDHSia~g~v~g 204 (413)
T 3mmr_A 180 NELRKKNFVLNIGGDHGVAFSSILS 204 (413)
T ss_dssp HHHTTTCEEEEEESSGGGHHHHHHH
T ss_pred HHHHCCCEEEEEECCCHHHHHHHHH
T ss_conf 9996799689982762758999999
No 26
>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} SCOP: c.42.1.1 PDB: 1wog_A 1woi_A
Probab=34.43 E-value=21 Score=15.78 Aligned_cols=29 Identities=17% Similarity=0.155 Sum_probs=22.1
Q ss_pred HHHHHCCCCEEEECCCCHHHHHHHCCCCC
Q ss_conf 99996399408978932799999617244
Q 537021.9.peg.8 6 LQRYKKRFLPIIVGGTGLYFRALTGQLSI 34 (217)
Q Consensus 6 ~e~~~r~kiPIiVGGTglY~~all~g~~~ 34 (217)
.+++++|++||+.||-+-=.-.++.++..
T Consensus 105 ~~~~~~~~~pi~lGGdHsit~~~~~al~~ 133 (305)
T 1woh_A 105 RQVRGRCRVPVFLGGDHSVSYPLLRAFAD 133 (305)
T ss_dssp HHHHTTEEEEEEEESSGGGHHHHHGGGTT
T ss_pred HHHHHCCCCEEEECCCCCCCHHHHHHHHH
T ss_conf 99985898335506776640245666650
No 27
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=34.40 E-value=16 Score=16.56 Aligned_cols=75 Identities=17% Similarity=0.181 Sum_probs=37.8
Q ss_pred HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 10000107867899999997776542113456777751138631013442068567789867899989999999999998
Q 537021.9.peg.8 111 SAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIATNK 190 (217)
Q Consensus 111 ~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~Tr~ 190 (217)
.+.+|++.++.+.|.+|+..|-.. --++++.-++. ...+.....-.+ ..+++--+-+++++.+.+..-..+
T Consensus 117 ~~~I~~~~~~~e~l~~RL~~R~~~-----~~e~i~~Rl~~-~~~e~~~~~~~~---~~D~vI~N~dle~a~~~l~~iI~~ 187 (198)
T 1lvg_A 117 PIYIFVQPPSLDVLEQRLRLRNTE-----TEESLAKRLAA-ARTDMESSKEPG---LFDLVIINDDLDKAYATLKQALSE 187 (198)
T ss_dssp CEEEEEECSCHHHHHHHHHHHTCS-----CHHHHHHHHHH-HHHHTTGGGSTT---TCSEEEECSSHHHHHHHHHHHTHH
T ss_pred CEEEEEECCCHHHHHHHHHHCCCC-----CHHHHHHHHHH-HHHHHHHCHHCC---CCCEEEECCCHHHHHHHHHHHHHH
T ss_conf 189999699989999999973898-----67899999999-999998444128---997899890999999999999999
Q ss_pred HHHH
Q ss_conf 8888
Q 537021.9.peg.8 191 YAKR 194 (217)
Q Consensus 191 yAKR 194 (217)
..||
T Consensus 188 ~~k~ 191 (198)
T 1lvg_A 188 EIKK 191 (198)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9866
No 28
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, lyase; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=33.99 E-value=14 Score=16.98 Aligned_cols=35 Identities=11% Similarity=0.175 Sum_probs=21.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 89998999999999999888887688628887531
Q 537021.9.peg.8 173 GEINYDETLQRGIIATNKYAKRQKTWLCHQFQADW 207 (217)
Q Consensus 173 g~~~~~e~~e~~~~~Tr~yAKRQ~TWfr~~~~~~w 207 (217)
-+++++++++.....--.+.|++.+--.+.+...|
T Consensus 336 P~~~leegi~~ti~~yl~~~k~~~~~~~~~~~~~~ 370 (381)
T 1n7h_A 336 PQVGFEKLVKMMVDEDLELAKREKVLVDAGYMDAK 370 (381)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHHHTTC----
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 68889999999999999999715666538762025
No 29
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=33.96 E-value=13 Score=17.16 Aligned_cols=21 Identities=24% Similarity=0.251 Sum_probs=14.3
Q ss_pred HHCC--CCEEEECCCCHHHHHHH
Q ss_conf 9639--94089789327999996
Q 537021.9.peg.8 9 YKKR--FLPIIVGGTGLYFRALT 29 (217)
Q Consensus 9 ~~r~--kiPIiVGGTglY~~all 29 (217)
|+++ |+-+|+|||||==..|+
T Consensus 19 ~~~~Mkk~~LITGatGfIGs~l~ 41 (375)
T 1t2a_A 19 FQGHMRNVALITGITGQDGSYLA 41 (375)
T ss_dssp -----CCEEEEETTTSHHHHHHH
T ss_pred HHCCCCCEEEEECCCCHHHHHHH
T ss_conf 44079876999608628999999
No 30
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=33.76 E-value=24 Score=15.45 Aligned_cols=67 Identities=7% Similarity=0.126 Sum_probs=39.0
Q ss_pred HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH-HHHHCCCCCHHHHHHHHHHHH
Q ss_conf 100001078678999999977765421134567777511386310134420685677-898678999899999999999
Q 537021.9.peg.8 111 SAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDI-IALLKGEINYDETLQRGIIAT 188 (217)
Q Consensus 111 ~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~-~~yL~g~~~~~e~~e~~~~~T 188 (217)
....++|.++.+.+.+|+..|-.......+++.-...++. ..+.|. .-.+++..+.++.++.+...-
T Consensus 104 ~~~~i~l~~~~e~~~~Rl~~R~~~~~~~~~~~~~~~~~e~-----------~~~~e~~~i~id~~~~~e~v~~~il~~l 171 (175)
T 1knq_A 104 NLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQE-----------PGADETDVLVVDIDQPLEGVVASTIEVI 171 (175)
T ss_dssp TEEEEEEECCHHHHHHHHHTSTTCCCCHHHHHHHHHHCCC-----------CCTTCTTEEEEECSSCHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC-----------CCCCCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf 8368751899999999998574789887889989998437-----------7777799899869899999999999999
No 31
>2ef5_A Arginase; TTHA1496, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: LYS; 2.00A {Thermus thermophilus} PDB: 2ef4_A* 2eiv_A
Probab=33.64 E-value=10 Score=17.83 Aligned_cols=26 Identities=19% Similarity=0.316 Sum_probs=16.6
Q ss_pred HHHHHCCCCEEEECCCCHHHHHHHCC
Q ss_conf 99996399408978932799999617
Q 537021.9.peg.8 6 LQRYKKRFLPIIVGGTGLYFRALTGQ 31 (217)
Q Consensus 6 ~e~~~r~kiPIiVGGTglY~~all~g 31 (217)
.+.+++|++||++||-+--.-+.+.+
T Consensus 80 ~~~l~~g~~pi~lGGdHsit~~~~~a 105 (290)
T 2ef5_A 80 LAALPEGVFPIVLGGDHSLSMGSVAG 105 (290)
T ss_dssp HHTSCTTEEEEEEESSGGGHHHHHHH
T ss_pred HHHHHCCCEEEEECCCCHHHHHHHHC
T ss_conf 86762597569966864245999864
No 32
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, shikimate pathway, nucleotide-binding, amino-acid biosynthesis; 2.10A {Aquifex aeolicus VF5}
Probab=33.06 E-value=6.2 Score=19.31 Aligned_cols=67 Identities=19% Similarity=0.211 Sum_probs=40.6
Q ss_pred HEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 0000107867899999997776542113456777751138631013442068567789867899989999999999
Q 537021.9.peg.8 112 AHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIA 187 (217)
Q Consensus 112 ~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~ 187 (217)
...++|.++.+.+.+|+..|-+..+-+...++++.++... .|. |+++---++.+.+.++.++.+...
T Consensus 94 ~~~v~L~~~~e~~~~Rl~~~~~Rp~l~~~~~~~~~~~~~R----~~~-----Y~~ad~~Idt~~~~eeiv~~Il~~ 160 (168)
T 2pt5_A 94 GTTVFIDIPFEVFLERCKDSKERPLLKRPLDEIKNLFEER----RKI-----YSKADIKVKGEKPPEEVVKEILLS 160 (168)
T ss_dssp SEEEEEECCHHHHHHHCBCTTCCBGGGSCGGGTHHHHHHH----HHH-----HTTSSEEEECSSCHHHHHHHHHHH
T ss_pred CCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH----HHH-----HHHCCEEEECCCCHHHHHHHHHHH
T ss_conf 8337873588998888524788867468599999999998----999-----984999997989999999999999
No 33
>1u83_A Phosphosulfolactate synthase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, lyase; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=32.71 E-value=25 Score=15.34 Aligned_cols=77 Identities=13% Similarity=0.217 Sum_probs=41.5
Q ss_pred HHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHH
Q ss_conf 46899999639940897893279999961724488999899999999999622355566553116232023570156999
Q 537021.9.peg.8 2 LSKKLQRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQRI 81 (217)
Q Consensus 2 ~~k~~e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri 81 (217)
+.++|+...+..|++..||| |.-.|+..|- + ++..+...+.|-+.+ ++ ....-.+...++.|+
T Consensus 82 L~eKI~l~~~~~V~v~~GGT-lfE~a~~q~~-----~-----d~yl~~~k~lGf~~I-----EI-SdGsi~i~~~~~~~~ 144 (276)
T 1u83_A 82 LEEKISTLKEHDITFFFGGT-LFEKYVSQKK-----V-----NEFHRYCTYFGCEYI-----EI-SNGTLPMTNKEKAAY 144 (276)
T ss_dssp HHHHHHHHHHTTCEEEECHH-HHHHHHHTTC-----H-----HHHHHHHHHTTCSEE-----EE-CCSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHCCCEEECCCH-HHHHHHHHCC-----H-----HHHHHHHHHCCCCEE-----EE-CCCCCCCCHHHHHHH
T ss_conf 99999999986996978968-9999998188-----9-----999999998599889-----97-898012898999999
Q ss_pred HHHHHHHHHCCCCHHHH
Q ss_conf 99999985348874677
Q 537021.9.peg.8 82 ARALEIKLVSGQSIIEF 98 (217)
Q Consensus 82 ~RaLEi~~~tGk~~s~~ 98 (217)
+++.. ..+..++|.
T Consensus 145 I~~~~---~~~~V~sEv 158 (276)
T 1u83_A 145 IADFS---DEFLVLSEV 158 (276)
T ss_dssp HHHHT---TTSEEEEEC
T ss_pred HHHHH---HCCEECCCC
T ss_conf 99998---549345435
No 34
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=32.68 E-value=25 Score=15.33 Aligned_cols=27 Identities=22% Similarity=0.263 Sum_probs=18.3
Q ss_pred HHHHHHH-CCCCEEEECCCCHHHHHHHC
Q ss_conf 8999996-39940897893279999961
Q 537021.9.peg.8 4 KKLQRYK-KRFLPIIVGGTGLYFRALTG 30 (217)
Q Consensus 4 k~~e~~~-r~kiPIiVGGTglY~~all~ 30 (217)
|.-+.|+ .+|.-+|+||||+==++|+.
T Consensus 9 ~~~~~~~M~~kkILVtGatG~iG~~lv~ 36 (242)
T 2bka_A 9 KLREDFRMQNKSVFILGASGETGRVLLK 36 (242)
T ss_dssp HHHHHHHHTCCEEEEECTTSHHHHHHHH
T ss_pred HHHHHCCCCCCEEEEECCCCHHHHHHHH
T ss_conf 6788607789969999998499999999
No 35
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=30.79 E-value=17 Score=16.37 Aligned_cols=20 Identities=15% Similarity=0.310 Sum_probs=15.3
Q ss_pred HCCCCEEEECCCCHHHHHHH
Q ss_conf 63994089789327999996
Q 537021.9.peg.8 10 KKRFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 10 ~r~kiPIiVGGTglY~~all 29 (217)
.+||.-+|+|||||==..|+
T Consensus 9 ~~gk~VLVTG~tGfIGs~l~ 28 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVV 28 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHH
T ss_conf 99599999899789999999
No 36
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'- deoxyadenosine, radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=29.07 E-value=22 Score=15.66 Aligned_cols=21 Identities=5% Similarity=-0.032 Sum_probs=7.6
Q ss_pred EEEECCCHHHH-HHHHHHHHHH
Q ss_conf 00107867899-9999977765
Q 537021.9.peg.8 114 KIIILPERSAL-KERIRRRFTQ 134 (217)
Q Consensus 114 ~i~l~~~r~~L-~~rI~~R~~~ 134 (217)
-++...+.+.+ ..-++..++.
T Consensus 162 ~LG~~vp~ee~v~~a~e~~aD~ 183 (262)
T 1xrs_B 162 NLGSQVANEDFIKKAVELEADV 183 (262)
T ss_dssp ECCSSBCHHHHHHHHHHTTCSE
T ss_pred ECCCCCCHHHHHHHHHHCCCCE
T ss_conf 6888999999999998649999
No 37
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genomics, NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus VF5} PDB: 2z95_A*
Probab=29.03 E-value=19 Score=16.10 Aligned_cols=18 Identities=22% Similarity=0.017 Sum_probs=12.4
Q ss_pred CCCCEEEECCCCHHHHHH
Q ss_conf 399408978932799999
Q 537021.9.peg.8 11 KRFLPIIVGGTGLYFRAL 28 (217)
Q Consensus 11 r~kiPIiVGGTglY~~al 28 (217)
+||--+|+|||||==.+|
T Consensus 2 ~~KkilVTG~tGfIGs~l 19 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYL 19 (345)
T ss_dssp -CCEEEEETTTSHHHHHH
T ss_pred CCCEEEEECCCCHHHHHH
T ss_conf 709899989987899999
No 38
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoid, oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=28.75 E-value=18 Score=16.22 Aligned_cols=20 Identities=25% Similarity=0.333 Sum_probs=13.9
Q ss_pred HCCCCEEEECCCCHHHHHHHC
Q ss_conf 639940897893279999961
Q 537021.9.peg.8 10 KKRFLPIIVGGTGLYFRALTG 30 (217)
Q Consensus 10 ~r~kiPIiVGGTglY~~all~ 30 (217)
.++|| +|+||||+==.+++.
T Consensus 9 ~k~KV-lV~GaTG~iG~~lv~ 28 (346)
T 3i6i_A 9 PKGRV-LIAGATGFIGQFVAT 28 (346)
T ss_dssp --CCE-EEECTTSHHHHHHHH
T ss_pred CCCEE-EEECCCCHHHHHHHH
T ss_conf 99919-998989689999999
No 39
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=27.90 E-value=11 Score=17.56 Aligned_cols=18 Identities=28% Similarity=0.396 Sum_probs=11.6
Q ss_pred CCCCEEEECCCCHHHHHHH
Q ss_conf 3994089789327999996
Q 537021.9.peg.8 11 KRFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 11 r~kiPIiVGGTglY~~all 29 (217)
+.|| +|+|||||==..|+
T Consensus 3 ~KkI-lITG~tGfiG~~l~ 20 (321)
T 1e6u_A 3 KQRV-FIAGHRGMVGSAIR 20 (321)
T ss_dssp CEEE-EEETTTSHHHHHHH
T ss_pred CCEE-EEECCCCHHHHHHH
T ss_conf 8869-99848748999999
No 40
>1pgy_A SWA2P; UBA, ubiquitin, auxilin, ubiquitin-associated domain, protein binding; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=27.42 E-value=22 Score=15.72 Aligned_cols=40 Identities=13% Similarity=0.406 Sum_probs=25.3
Q ss_pred HHHHHHHHHHCCCCCHHHHHHCCC--HHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 456777751138631013442068--56778986789998999999999
Q 537021.9.peg.8 140 AIDEIRSLMKMNLSLDLPIMKAIG--VRDIIALLKGEINYDETLQRGII 186 (217)
Q Consensus 140 lieEv~~L~~~~~~~~~~~~~~IG--Yke~~~yL~g~~~~~e~~e~~~~ 186 (217)
+++||+.+- ..-+.|+| .-++..|-+..+.+|+.++..++
T Consensus 2 ~VDEVkDME-------iAkLMSLGl~id~A~~~Ye~gi~ye~~i~~~k~ 43 (47)
T 1pgy_A 2 LVDEVKDME-------IARLMSLGLSIEEATEFYENDVTYERYLEILKS 43 (47)
T ss_dssp CSHHHHHHH-------HHHHHHHCCCSHHHHHHHHHHCSSHHHHHHHHH
T ss_pred HHHHHHHHH-------HHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 015998899-------999998127856778999746449999999987
No 41
>2x6t_A AGME,, ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=26.91 E-value=20 Score=15.92 Aligned_cols=18 Identities=22% Similarity=0.429 Sum_probs=12.6
Q ss_pred CCCCEEEECCCCHHHHHH
Q ss_conf 399408978932799999
Q 537021.9.peg.8 11 KRFLPIIVGGTGLYFRAL 28 (217)
Q Consensus 11 r~kiPIiVGGTglY~~al 28 (217)
+||--+|+|||||==..|
T Consensus 45 ~~KkILVTGgtGfIGs~l 62 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNI 62 (357)
T ss_dssp ---CEEEETTTSHHHHHH
T ss_pred CCCEEEEECCCCHHHHHH
T ss_conf 979999948987899999
No 42
>2waq_Q DNA-directed RNA polymerase RPO13 subunit; multi-subunit, transcription; 3.35A {Sulfolobus shibatae} PDB: 2wb1_J
Probab=26.61 E-value=17 Score=16.42 Aligned_cols=26 Identities=35% Similarity=0.392 Sum_probs=21.5
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 86789998999999999999888887
Q 537021.9.peg.8 170 LLKGEINYDETLQRGIIATNKYAKRQ 195 (217)
Q Consensus 170 yL~g~~~~~e~~e~~~~~Tr~yAKRQ 195 (217)
.|+|++|.+|+...+.-+-+.|.||-
T Consensus 54 Ll~gkiSieEAKk~Fed~~~~Y~K~D 79 (104)
T 2waq_Q 54 LLNGKISVDEAKRLFEDNYKDYEKRD 79 (104)
T ss_dssp TTCCSSSHHHHHHHHHHHHTTTTCCC
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 87575339999999999899988878
No 43
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=26.48 E-value=26 Score=15.20 Aligned_cols=21 Identities=19% Similarity=0.142 Sum_probs=14.1
Q ss_pred HHCCCCEEEECCCCHHHHHHH
Q ss_conf 963994089789327999996
Q 537021.9.peg.8 9 YKKRFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 9 ~~r~kiPIiVGGTglY~~all 29 (217)
|=+||--+|+|||||==..|+
T Consensus 6 ~~~~KkILVTGgtGfIGs~L~ 26 (357)
T 1rkx_A 6 FWQGKRVFVTGHTGFKGGWLS 26 (357)
T ss_dssp HHTTCEEEEETTTSHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHH
T ss_conf 579598999689978999999
No 44
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=26.09 E-value=24 Score=15.51 Aligned_cols=20 Identities=25% Similarity=0.424 Sum_probs=14.5
Q ss_pred CCCCEEEECCCCHHHHHHHC
Q ss_conf 39940897893279999961
Q 537021.9.peg.8 11 KRFLPIIVGGTGLYFRALTG 30 (217)
Q Consensus 11 r~kiPIiVGGTglY~~all~ 30 (217)
+||.-+|+|||||==..|+.
T Consensus 20 ~nK~ILVTGg~GfiGs~lv~ 39 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVR 39 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHH
T ss_conf 86999998988789999999
No 45
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=25.42 E-value=24 Score=15.43 Aligned_cols=20 Identities=30% Similarity=0.419 Sum_probs=14.8
Q ss_pred CCCCEEEECCCCHHHHHHHC
Q ss_conf 39940897893279999961
Q 537021.9.peg.8 11 KRFLPIIVGGTGLYFRALTG 30 (217)
Q Consensus 11 r~kiPIiVGGTglY~~all~ 30 (217)
..|.-+|+|||||==.+|+.
T Consensus 8 ~~K~vlVTGatGfIG~~l~~ 27 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVK 27 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHH
T ss_conf 99989997797399999999
No 46
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=25.39 E-value=20 Score=16.02 Aligned_cols=18 Identities=39% Similarity=0.613 Sum_probs=12.5
Q ss_pred CCCCEEEECCCCHHHHHHH
Q ss_conf 3994089789327999996
Q 537021.9.peg.8 11 KRFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 11 r~kiPIiVGGTglY~~all 29 (217)
|.|| +|+||||+-=..++
T Consensus 4 k~KI-LVtGatG~iG~~l~ 21 (313)
T 1qyd_A 4 KSRV-LIVGGTGYIGKRIV 21 (313)
T ss_dssp CCCE-EEESTTSTTHHHHH
T ss_pred CCEE-EEECCCCHHHHHHH
T ss_conf 9989-99899848999999
No 47
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=25.38 E-value=20 Score=16.02 Aligned_cols=19 Identities=21% Similarity=0.462 Sum_probs=13.4
Q ss_pred CCCCEEEECCCCHHHHHHHC
Q ss_conf 39940897893279999961
Q 537021.9.peg.8 11 KRFLPIIVGGTGLYFRALTG 30 (217)
Q Consensus 11 r~kiPIiVGGTglY~~all~ 30 (217)
+.|| +|+||||+==.+|+.
T Consensus 4 k~kI-LVtGatG~iG~~lv~ 22 (308)
T 1qyc_A 4 RSRI-LLIGATGYIGRHVAK 22 (308)
T ss_dssp CCCE-EEESTTSTTHHHHHH
T ss_pred CCEE-EEECCCCHHHHHHHH
T ss_conf 9979-998988389999999
No 48
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=25.02 E-value=18 Score=16.35 Aligned_cols=20 Identities=15% Similarity=0.134 Sum_probs=14.2
Q ss_pred HCCCCEEEECCCCHHHHHHH
Q ss_conf 63994089789327999996
Q 537021.9.peg.8 10 KKRFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 10 ~r~kiPIiVGGTglY~~all 29 (217)
..||.-+|+|||||==.+|+
T Consensus 3 ~~~k~VlITGatGfiG~~l~ 22 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLV 22 (337)
T ss_dssp ---CEEEETTTTSHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHH
T ss_conf 99988999889869999999
No 49
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=23.97 E-value=32 Score=14.65 Aligned_cols=71 Identities=11% Similarity=-0.027 Sum_probs=33.9
Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 000107867899999997776542113456777751138631013442068567789867899989999999999
Q 537021.9.peg.8 113 HKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQRGIIA 187 (217)
Q Consensus 113 ~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e~~~~~ 187 (217)
++|+|+.|.+++.+|+.+|-.. ....++.-.......+.......+... ..+-+++|..+.++....+...
T Consensus 132 ~~Ifld~~~e~~~~R~~~R~~~--~~~~~~~~~~~~~~~y~~~~~~~~~~~--~~ii~id~~~s~e~i~~~I~~~ 202 (207)
T 2qt1_A 132 RSYFLTIPYEECKRRRSTRVYQ--PPDSPGYFDGHVWPMYLKYRQEMQDIT--WEVVYLDGTKSEEDLFLQVYED 202 (207)
T ss_dssp EEEEEECCHHHHHHHHHHSCCS--SCCCTTHHHHTHHHHHHHHHHHGGGCS--SCCEEEETTSCHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCC--CEEEECCCCCCHHHHHHHHHHH
T ss_conf 5799988989999999975999--875599999999899999987888548--8699899988999999999999
No 50
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix bundle (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=22.59 E-value=38 Score=14.18 Aligned_cols=14 Identities=0% Similarity=-0.202 Sum_probs=5.5
Q ss_pred EEECCCHHHHHHHH
Q ss_conf 01078678999999
Q 537021.9.peg.8 115 IIILPERSALKERI 128 (217)
Q Consensus 115 i~l~~~r~~L~~rI 128 (217)
++.+.|.+.+-+.+
T Consensus 157 LG~~~p~e~i~~~v 170 (258)
T 2i2x_B 157 LGRDVPAEEVLAAV 170 (258)
T ss_dssp EEEECCSHHHHHHH
T ss_pred CCCCCCHHHHHHHH
T ss_conf 89989999999999
No 51
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=22.47 E-value=26 Score=15.18 Aligned_cols=19 Identities=32% Similarity=0.475 Sum_probs=13.5
Q ss_pred CCCCEEEECCCCHHHHHHHC
Q ss_conf 39940897893279999961
Q 537021.9.peg.8 11 KRFLPIIVGGTGLYFRALTG 30 (217)
Q Consensus 11 r~kiPIiVGGTglY~~all~ 30 (217)
+.|| +|+||||+==.+|+.
T Consensus 11 k~KI-lVtGatG~iG~~l~~ 29 (318)
T 2r6j_A 11 KSKI-LIFGGTGYIGNHMVK 29 (318)
T ss_dssp CCCE-EEETTTSTTHHHHHH
T ss_pred CCEE-EEECCCCHHHHHHHH
T ss_conf 9839-998999689999999
No 52
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium frigidimaris KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=22.43 E-value=29 Score=14.89 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=11.9
Q ss_pred CCCEEEECCCCHHHHHHH
Q ss_conf 994089789327999996
Q 537021.9.peg.8 12 RFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 12 ~kiPIiVGGTglY~~all 29 (217)
.|| +|+|||||==..|+
T Consensus 3 kKI-LItG~sGfiG~~l~ 19 (312)
T 2yy7_A 3 PKI-LIIGACGQIGTELT 19 (312)
T ss_dssp CCE-EEETTTSHHHHHHH
T ss_pred CEE-EEECCCCHHHHHHH
T ss_conf 709-99758988999999
No 53
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, GALE, NAD, SYK, UDP, N- acetylglucosamine, N-acetylgalactosamine, UDP-GLC; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=22.40 E-value=28 Score=15.00 Aligned_cols=19 Identities=21% Similarity=0.172 Sum_probs=13.4
Q ss_pred CCCCEEEECCCCHHHHHHH
Q ss_conf 3994089789327999996
Q 537021.9.peg.8 11 KRFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 11 r~kiPIiVGGTglY~~all 29 (217)
.-|+-+|+|||||==..|+
T Consensus 26 ~~K~~LVTG~tGfIGs~lv 44 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLL 44 (352)
T ss_dssp SCCEEEEETTTSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHH
T ss_conf 9998999678878999999
No 54
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=22.19 E-value=27 Score=15.10 Aligned_cols=19 Identities=26% Similarity=0.340 Sum_probs=13.3
Q ss_pred CCCCEEEECCCCHHHHHHHC
Q ss_conf 39940897893279999961
Q 537021.9.peg.8 11 KRFLPIIVGGTGLYFRALTG 30 (217)
Q Consensus 11 r~kiPIiVGGTglY~~all~ 30 (217)
++|| +|+||||+==.+|+.
T Consensus 2 ~~KI-LVtGatG~iG~~lv~ 20 (307)
T 2gas_A 2 ENKI-LILGPTGAIGRHIVW 20 (307)
T ss_dssp CCCE-EEESTTSTTHHHHHH
T ss_pred CCEE-EEECCCCHHHHHHHH
T ss_conf 8879-998998489999999
No 55
>3hkz_Y DNA-directed RNA polymerase subunit 13; archaea, metal-binding, nucleotidyltransferase, transcription, transferase, zinc, zinc-finger; 3.40A {Sulfolobus solfataricus}
Probab=22.09 E-value=17 Score=16.38 Aligned_cols=27 Identities=30% Similarity=0.367 Sum_probs=20.9
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 986789998999999999999888887
Q 537021.9.peg.8 169 ALLKGEINYDETLQRGIIATNKYAKRQ 195 (217)
Q Consensus 169 ~yL~g~~~~~e~~e~~~~~Tr~yAKRQ 195 (217)
..|+|+++.+++...+.-+-+.|.||-
T Consensus 53 ~Ll~gkiSieEAKk~Fed~~~~Y~K~D 79 (104)
T 3hkz_Y 53 NLLNGKITLEEAKKLFEDNYKEYEKRD 79 (104)
T ss_dssp HTTCCSSHHHHHHHHHHHHHTTTTCCC
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 987575339999999999899988877
No 56
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=21.53 E-value=40 Score=14.04 Aligned_cols=29 Identities=24% Similarity=0.301 Sum_probs=21.6
Q ss_pred HHHHHHHHHCCCCEEEECCCCHHHHHHHCC
Q ss_conf 468999996399408978932799999617
Q 537021.9.peg.8 2 LSKKLQRYKKRFLPIIVGGTGLYFRALTGQ 31 (217)
Q Consensus 2 ~~k~~e~~~r~kiPIiVGGTglY~~all~g 31 (217)
+.++|+...+..|++..|||-|= .++..|
T Consensus 57 L~eKI~l~~~~~V~v~~GGtlfE-~a~~q~ 85 (251)
T 1qwg_A 57 VKEKINYYKDWGIKVYPGGTLFE-YAYSKG 85 (251)
T ss_dssp HHHHHHHHHTTTCEEEECHHHHH-HHHHTT
T ss_pred HHHHHHHHHHCCCEEECCCHHHH-HHHHCC
T ss_conf 99999999986982757957999-999749
No 57
>2jb0_B Colicin E7; hydrolase/inhibitor, hydrolase/inhibitor complex, zinc, toxin, plasmid, nuclease, hydrolase, antibiotic, H-N-H motif, bacteriocin; 1.91A {Escherichia coli} SCOP: d.4.1.1 PDB: 3fbd_A 2jaz_B 2jbg_B 3gkl_A 3gjn_B 1pt3_A 2ivh_A 1ujz_B 2erh_B
Probab=20.38 E-value=42 Score=13.88 Aligned_cols=47 Identities=19% Similarity=0.455 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHH----HHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHH
Q ss_conf 999899999999----9996223555665531162320235701569999999
Q 537021.9.peg.8 37 EIPTAIREKIRE----KLKQYGSHILHDELSSLDSIVARQIHPSDGQRIARAL 85 (217)
Q Consensus 37 ~~~~~ir~~~~~----~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri~RaL 85 (217)
++|..|..+|+- .++.. .+++|.+..+ ||+.+....++|..|+.+..
T Consensus 30 piP~~IadkLrGr~F~sFd~F-R~afW~eVa~-Dp~L~~QF~~~N~~rmk~G~ 80 (131)
T 2jb0_B 30 PVPDRIANKLRDKEFKSFDDF-RKKFWEEVSK-DPELSKQFSRNNNDRMKVGK 80 (131)
T ss_dssp ECBHHHHHHHTTCEESSHHHH-HHHHHHHHHH-CHHHHTTSCHHHHHHHHTTC
T ss_pred CCCHHHHHHHCCCCCCCHHHH-HHHHHHHHHH-CHHHHHHHCHHHHHHHHCCC
T ss_conf 787899998668857888999-9999999831-99999985888899987789
No 58
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, , isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=20.14 E-value=36 Score=14.32 Aligned_cols=24 Identities=21% Similarity=0.274 Sum_probs=16.9
Q ss_pred HHHHHCCCCEEEECCCCHHHHHHH
Q ss_conf 999963994089789327999996
Q 537021.9.peg.8 6 LQRYKKRFLPIIVGGTGLYFRALT 29 (217)
Q Consensus 6 ~e~~~r~kiPIiVGGTglY~~all 29 (217)
++-...+|+-+|+|||||==..|+
T Consensus 5 ~~~~~~~K~ILITGatGFIGs~Lv 28 (699)
T 1z45_A 5 LQSESTSKIVLVTGGAGYIGSHTV 28 (699)
T ss_dssp ------CCEEEEETTTSHHHHHHH
T ss_pred HHCCCCCCEEEEECCCCHHHHHHH
T ss_conf 647799998999589848999999
Done!