Query 537021.9.peg.888_1 Match_columns 217 No_of_seqs 126 out of 2919 Neff 6.8 Searched_HMMs 13730 Date Wed May 25 05:35:47 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_888.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1vm6a3 c.2.1.3 (A:1-96,A:183- 49.7 3.6 0.00026 19.3 1.8 11 162-172 103-113 (128) 2 d2a0ma1 c.42.1.1 (A:13-310) Ar 47.3 4.4 0.00032 18.7 1.9 27 5-31 93-119 (298) 3 d1diha1 c.2.1.3 (A:2-130,A:241 46.8 5.8 0.00042 17.9 2.5 17 13-29 4-21 (162) 4 d1woha_ c.42.1.1 (A:) Agmatina 40.8 8.5 0.00062 16.8 2.6 29 6-34 103-131 (303) 5 d1pgya_ a.5.2.1 (A:) Auxilin-l 38.7 6.4 0.00046 17.7 1.6 40 140-186 2-43 (47) 6 d1t2aa_ c.2.1.2 (A:) GDP-manno 37.9 6.5 0.00047 17.6 1.6 18 12-29 1-18 (347) 7 d2ceva_ c.42.1.1 (A:) Arginase 37.7 7.6 0.00055 17.2 1.9 26 7-32 83-108 (298) 8 d2aeba1 c.42.1.1 (A:5-313) Arg 36.9 8 0.00058 17.0 1.9 26 7-32 82-107 (309) 9 d1pq3a_ c.42.1.1 (A:) Arginase 35.4 8 0.00058 17.0 1.7 26 7-32 82-107 (306) 10 d1db3a_ c.2.1.2 (A:) GDP-manno 35.3 7 0.00051 17.4 1.4 18 12-29 1-18 (357) 11 d1qyda_ c.2.1.2 (A:) Pinoresin 31.9 7.5 0.00054 17.2 1.1 19 10-29 2-20 (312) 12 d1n7ha_ c.2.1.2 (A:) GDP-manno 30.9 9.8 0.00071 16.4 1.6 19 12-30 1-19 (339) 13 d1u83a_ c.1.27.1 (A:) (2r)-pho 28.6 12 0.00088 15.8 1.7 77 2-98 58-134 (249) 14 d1qwga_ c.1.27.1 (A:) (2r)-pho 28.0 17 0.0013 14.8 6.1 66 2-85 57-123 (251) 15 d1sxja2 c.37.1.20 (A:295-547) 27.4 15 0.0011 15.2 2.0 65 112-182 176-244 (253) 16 d1knqa_ c.37.1.17 (A:) Glucona 27.1 18 0.0013 14.7 3.9 67 111-188 102-169 (171) 17 d1gq6a_ c.42.1.1 (A:) Proclava 26.8 16 0.0012 15.0 2.1 27 5-31 96-122 (301) 18 d1qyca_ c.2.1.2 (A:) Phenylcou 26.0 11 0.0008 16.1 1.1 20 10-30 2-25 (307) 19 d1xrsb1 c.23.6.1 (B:102-261) D 24.5 18 0.0013 14.8 1.9 10 12-21 17-26 (160) 20 d1rkxa_ c.2.1.2 (A:) CDP-gluco 24.3 15 0.0011 15.2 1.6 20 10-29 6-25 (356) 21 d1ek6a_ c.2.1.2 (A:) Uridine d 23.2 12 0.00087 15.9 0.9 17 13-30 4-20 (346) 22 d1oc2a_ c.2.1.2 (A:) dTDP-gluc 21.7 15 0.0011 15.1 1.2 14 16-29 6-19 (346) 23 d1y1pa1 c.2.1.2 (A:2-343) Alde 21.7 19 0.0014 14.6 1.6 20 10-29 9-28 (342) 24 d1hska1 d.145.1.2 (A:15-208) U 21.4 23 0.0017 14.0 2.3 25 71-95 37-61 (194) 25 d1z45a2 c.2.1.2 (A:11-357) Uri 20.8 18 0.0013 14.6 1.4 18 13-30 2-19 (347) 26 d2o23a1 c.2.1.2 (A:6-253) Type 20.6 19 0.0014 14.5 1.5 14 11-24 4-17 (248) No 1 >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} Probab=49.73 E-value=3.6 Score=19.31 Aligned_cols=11 Identities=27% Similarity=0.356 Sum_probs=3.7 Q ss_pred CCHHHHHHHHC Q ss_conf 68567789867 Q 537021.9.peg.8 162 IGVRDIIALLK 172 (217) Q Consensus 162 IGYke~~~yL~ 172 (217) ++-......+- T Consensus 103 ~~l~~~~~~~~ 113 (128) T d1vm6a3 103 IGALKAAEFLV 113 (128) T ss_dssp HHHHHHHHHHT T ss_pred HHHHHHHHHHH T ss_conf 99999999987 No 2 >d2a0ma1 c.42.1.1 (A:13-310) Arginase {Trypanosoma cruzi [TaxId: 5693]} Probab=47.33 E-value=4.4 Score=18.74 Aligned_cols=27 Identities=11% Similarity=0.156 Sum_probs=18.8 Q ss_pred HHHHHHCCCCEEEECCCCHHHHHHHCC Q ss_conf 999996399408978932799999617 Q 537021.9.peg.8 5 KLQRYKKRFLPIIVGGTGLYFRALTGQ 31 (217) Q Consensus 5 ~~e~~~r~kiPIiVGGTglY~~all~g 31 (217) ..+++++|++||++||.+--.-+.+.+ T Consensus 93 v~~~~~~g~~pivlGGdHsit~~~~~a 119 (298) T d2a0ma1 93 VFTVLARGAFPFVIGGGNDQSAPNGRA 119 (298) T ss_dssp HHHHHHTTCEEEEEESCGGGHHHHHHH T ss_pred HHHHHHCCCEEEEECCCCCHHHHHHHH T ss_conf 999996898466634786322777765 No 3 >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} Probab=46.80 E-value=5.8 Score=17.92 Aligned_cols=17 Identities=24% Similarity=0.337 Sum_probs=8.3 Q ss_pred CCEEEECC-CCHHHHHHH Q ss_conf 94089789-327999996 Q 537021.9.peg.8 13 FLPIIVGG-TGLYFRALT 29 (217) Q Consensus 13 kiPIiVGG-TglY~~all 29 (217) .|.|.+-| ||===++++ T Consensus 4 ~ikI~i~Ga~GrMG~~i~ 21 (162) T d1diha1 4 NIRVAIAGAGGRMGRQLI 21 (162) T ss_dssp BEEEEETTTTSHHHHHHH T ss_pred CCEEEEECCCCHHHHHHH T ss_conf 778999899887899999 No 4 >d1woha_ c.42.1.1 (A:) Agmatinase {Deinococcus radiodurans [TaxId: 1299]} Probab=40.78 E-value=8.5 Score=16.83 Aligned_cols=29 Identities=17% Similarity=0.155 Sum_probs=22.5 Q ss_pred HHHHHCCCCEEEECCCCHHHHHHHCCCCC Q ss_conf 99996399408978932799999617244 Q 537021.9.peg.8 6 LQRYKKRFLPIIVGGTGLYFRALTGQLSI 34 (217) Q Consensus 6 ~e~~~r~kiPIiVGGTglY~~all~g~~~ 34 (217) .+++++|++||++||-+--.-..+.++.. T Consensus 103 ~~~l~~g~~Pi~lGGdHsit~~~~~a~~~ 131 (303) T d1woha_ 103 RQVRGRCRVPVFLGGDHSVSYPLLRAFAD 131 (303) T ss_dssp HHHHTTEEEEEEEESSGGGHHHHHGGGTT T ss_pred HHHHHCCCEEEEECCCCCCCHHHHHHHHH T ss_conf 88875597434434766642579998752 No 5 >d1pgya_ a.5.2.1 (A:) Auxilin-like protein Swa2p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=38.71 E-value=6.4 Score=17.68 Aligned_cols=40 Identities=10% Similarity=0.350 Sum_probs=27.4 Q ss_pred HHHHHHHHHHCCCCCHHHHHH--CCCHHHHHHHHCCCCCHHHHHHHHHH Q ss_conf 456777751138631013442--06856778986789998999999999 Q 537021.9.peg.8 140 AIDEIRSLMKMNLSLDLPIMK--AIGVRDIIALLKGEINYDETLQRGII 186 (217) Q Consensus 140 lieEv~~L~~~~~~~~~~~~~--~IGYke~~~yL~g~~~~~e~~e~~~~ 186 (217) +++||+.+- ..-+. ++..-++..|-++.+++|+.++..++ T Consensus 2 ~vDEVkDME-------iAkLMSLGL~id~At~~Ye~gi~yE~~l~~~k~ 43 (47) T d1pgya_ 2 LVDEVKDME-------IARLMSLGLSIEEATEFYENDVTYERYLEILKS 43 (47) T ss_dssp CSHHHHHHH-------HHHHHHHCCCSHHHHHHHHHHCSSHHHHHHHHH T ss_pred HHHHHHHHH-------HHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHH T ss_conf 025998899-------999998136778889999657429999999987 No 6 >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Probab=37.87 E-value=6.5 Score=17.63 Aligned_cols=18 Identities=33% Similarity=0.266 Sum_probs=12.3 Q ss_pred CCCEEEECCCCHHHHHHH Q ss_conf 994089789327999996 Q 537021.9.peg.8 12 RFLPIIVGGTGLYFRALT 29 (217) Q Consensus 12 ~kiPIiVGGTglY~~all 29 (217) .||.+|+|||||==..|+ T Consensus 1 kKI~LVTG~tGfIG~~l~ 18 (347) T d1t2aa_ 1 RNVALITGITGQDGSYLA 18 (347) T ss_dssp CCEEEEETTTSHHHHHHH T ss_pred CCEEEEECCCCHHHHHHH T ss_conf 988999047768999999 No 7 >d2ceva_ c.42.1.1 (A:) Arginase {Bacillus caldovelox [TaxId: 33931]} Probab=37.70 E-value=7.6 Score=17.16 Aligned_cols=26 Identities=15% Similarity=0.263 Sum_probs=19.1 Q ss_pred HHHHCCCCEEEECCCCHHHHHHHCCC Q ss_conf 99963994089789327999996172 Q 537021.9.peg.8 7 QRYKKRFLPIIVGGTGLYFRALTGQL 32 (217) Q Consensus 7 e~~~r~kiPIiVGGTglY~~all~g~ 32 (217) +++++|++||++||-+-=-.+.+.++ T Consensus 83 ~i~~~g~~pi~lGGdhsit~~~~~al 108 (298) T d2ceva_ 83 QVVQRGRFPLVLGGDHSIAIGTLAGV 108 (298) T ss_dssp HHHHTTCEEEEEESSGGGHHHHHHHH T ss_pred HHHHCCCEEEEECCCCCCCCCHHHHH T ss_conf 99967983788358875463304556 No 8 >d2aeba1 c.42.1.1 (A:5-313) Arginase {Human (Homo sapiens) [TaxId: 9606]} Probab=36.94 E-value=8 Score=17.04 Aligned_cols=26 Identities=12% Similarity=0.112 Sum_probs=19.3 Q ss_pred HHHHCCCCEEEECCCCHHHHHHHCCC Q ss_conf 99963994089789327999996172 Q 537021.9.peg.8 7 QRYKKRFLPIIVGGTGLYFRALTGQL 32 (217) Q Consensus 7 e~~~r~kiPIiVGGTglY~~all~g~ 32 (217) +++++|++||++||-+----+.+.++ T Consensus 82 ~i~~~g~~pi~lGGdHsit~~~~~a~ 107 (309) T d2aeba1 82 EVKKNGRISLVLGGDHSLAIGSISGH 107 (309) T ss_dssp HHHHTTCEEEEEESCGGGHHHHHHHH T ss_pred HHHHCCCEEEEECCCCCCHHHHHHHH T ss_conf 99967974699468875207778888 No 9 >d1pq3a_ c.42.1.1 (A:) Arginase {Human (Homo sapiens), isoform II, mitochondrial [TaxId: 9606]} Probab=35.42 E-value=8 Score=17.04 Aligned_cols=26 Identities=8% Similarity=0.063 Sum_probs=19.1 Q ss_pred HHHHCCCCEEEECCCCHHHHHHHCCC Q ss_conf 99963994089789327999996172 Q 537021.9.peg.8 7 QRYKKRFLPIIVGGTGLYFRALTGQL 32 (217) Q Consensus 7 e~~~r~kiPIiVGGTglY~~all~g~ 32 (217) ++.++|++||++||-+----+.+.++ T Consensus 82 ~~~~~g~~pi~lGGdHsis~~~~~a~ 107 (306) T d1pq3a_ 82 RAVSDGYSCVTLGGDHSLAIGTISGH 107 (306) T ss_dssp HHHHTTCEEEEEESSGGGHHHHHHHH T ss_pred HHHHCCCCEEEECCCCCCCHHHHHHH T ss_conf 99858996047457775205667889 No 10 >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Probab=35.35 E-value=7 Score=17.40 Aligned_cols=18 Identities=28% Similarity=0.194 Sum_probs=13.0 Q ss_pred CCCEEEECCCCHHHHHHH Q ss_conf 994089789327999996 Q 537021.9.peg.8 12 RFLPIIVGGTGLYFRALT 29 (217) Q Consensus 12 ~kiPIiVGGTglY~~all 29 (217) .|+.+|+|||||==..|+ T Consensus 1 ~K~vLITGatGfiGs~lv 18 (357) T d1db3a_ 1 SKVALITGVTGQDGSYLA 18 (357) T ss_dssp CCEEEEETTTSHHHHHHH T ss_pred CCEEEEECCCCHHHHHHH T ss_conf 988999688868999999 No 11 >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Probab=31.89 E-value=7.5 Score=17.21 Aligned_cols=19 Identities=42% Similarity=0.637 Sum_probs=13.0 Q ss_pred HCCCCEEEECCCCHHHHHHH Q ss_conf 63994089789327999996 Q 537021.9.peg.8 10 KKRFLPIIVGGTGLYFRALT 29 (217) Q Consensus 10 ~r~kiPIiVGGTglY~~all 29 (217) +|.|| +|+||||+==.+++ T Consensus 2 ~k~KI-LVtGatG~iG~~l~ 20 (312) T d1qyda_ 2 KKSRV-LIVGGTGYIGKRIV 20 (312) T ss_dssp CCCCE-EEESTTSTTHHHHH T ss_pred CCCEE-EEECCCCHHHHHHH T ss_conf 98999-99899878999999 No 12 >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=30.92 E-value=9.8 Score=16.44 Aligned_cols=19 Identities=37% Similarity=0.286 Sum_probs=14.2 Q ss_pred CCCEEEECCCCHHHHHHHC Q ss_conf 9940897893279999961 Q 537021.9.peg.8 12 RFLPIIVGGTGLYFRALTG 30 (217) Q Consensus 12 ~kiPIiVGGTglY~~all~ 30 (217) .|+-||+|||||==..|+. T Consensus 1 ~k~~LVTGatGfiG~~lv~ 19 (339) T d1n7ha_ 1 RKIALITGITGQDGSYLTE 19 (339) T ss_dssp CCEEEEETTTSHHHHHHHH T ss_pred CCEEEEECCCCHHHHHHHH T ss_conf 9989996886489999999 No 13 >d1u83a_ c.1.27.1 (A:) (2r)-phospho-3-sulfolactate synthase ComA {Bacillus subtilis [TaxId: 1423]} Probab=28.60 E-value=12 Score=15.84 Aligned_cols=77 Identities=12% Similarity=0.173 Sum_probs=42.8 Q ss_pred HHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHH Q ss_conf 46899999639940897893279999961724488999899999999999622355566553116232023570156999 Q 537021.9.peg.8 2 LSKKLQRYKKRFLPIIVGGTGLYFRALTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQRI 81 (217) Q Consensus 2 ~~k~~e~~~r~kiPIiVGGTglY~~all~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~Ri 81 (217) ++++|+...+..|++..|||-|= .++..|- + ++..+.....|-+.. ++ ....-.+...++.|+ T Consensus 58 L~eKI~l~~~~~V~v~~GGtlfE-~a~~~~~-----~-----~~y~~~~~~lGf~~i-----Ei-Sdg~i~i~~~~~~~~ 120 (249) T d1u83a_ 58 LEEKISTLKEHDITFFFGGTLFE-KYVSQKK-----V-----NEFHRYCTYFGCEYI-----EI-SNGTLPMTNKEKAAY 120 (249) T ss_dssp HHHHHHHHHHTTCEEEECHHHHH-HHHHTTC-----H-----HHHHHHHHHTTCSEE-----EE-CCSSSCCCHHHHHHH T ss_pred HHHHHHHHHHCCCEEECCCHHHH-HHHHCCC-----H-----HHHHHHHHHCCCCEE-----EE-CCCCCCCCHHHHHHH T ss_conf 99999999986995857989999-9998199-----9-----999999998599889-----97-798455899999999 Q ss_pred HHHHHHHHHCCCCHHHH Q ss_conf 99999985348874677 Q 537021.9.peg.8 82 ARALEIKLVSGQSIIEF 98 (217) Q Consensus 82 ~RaLEi~~~tGk~~s~~ 98 (217) ++++. ..|..+||. T Consensus 121 I~~~~---~~~~V~sEv 134 (249) T d1u83a_ 121 IADFS---DEFLVLSEV 134 (249) T ss_dssp HHHHT---TTSEEEEEC T ss_pred HHHHH---HCCEECCCC T ss_conf 99999---669525535 No 14 >d1qwga_ c.1.27.1 (A:) (2r)-phospho-3-sulfolactate synthase ComA {Archaeon Methanococcus jannaschii [TaxId: 2190]} Probab=27.98 E-value=17 Score=14.82 Aligned_cols=66 Identities=15% Similarity=0.252 Sum_probs=35.6 Q ss_pred HHHHHHHHHCCCCEEEECCCCHHHHH-HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHH Q ss_conf 46899999639940897893279999-96172448899989999999999962235556655311623202357015699 Q 537021.9.peg.8 2 LSKKLQRYKKRFLPIIVGGTGLYFRA-LTGQLSIMPEIPTAIREKIREKLKQYGSHILHDELSSLDSIVARQIHPSDGQR 80 (217) Q Consensus 2 ~~k~~e~~~r~kiPIiVGGTglY~~a-ll~g~~~~p~~~~~ir~~~~~~~~~~g~~~l~~~L~~~DP~~a~~i~~nd~~R 80 (217) +.++|+...+..|++..||| +++. +..|- + ++..+.....|-+.. ++ ....-.+...++.| T Consensus 57 l~eKI~l~~~~~V~v~~GGt--lfE~a~~qg~-----~-----~~y~~~~~~lGf~~i-----Ei-Sdg~~~i~~~~~~~ 118 (251) T d1qwga_ 57 VKEKINYYKDWGIKVYPGGT--LFEYAYSKGK-----F-----DEFLNECEKLGFEAV-----EI-SDGSSDISLEERNN 118 (251) T ss_dssp HHHHHHHHHTTTCEEEECHH--HHHHHHHTTC-----H-----HHHHHHHHHHTCCEE-----EE-CCSSSCCCHHHHHH T ss_pred HHHHHHHHHHCCCEEECCCH--HHHHHHHCCC-----H-----HHHHHHHHHCCCCEE-----EE-CCCCCCCCHHHHHH T ss_conf 99999999985993757967--9999997497-----9-----999999998599889-----97-59856789899999 Q ss_pred HHHHH Q ss_conf 99999 Q 537021.9.peg.8 81 IARAL 85 (217) Q Consensus 81 i~RaL 85 (217) +++.. T Consensus 119 ~I~~~ 123 (251) T d1qwga_ 119 AIKRA 123 (251) T ss_dssp HHHHH T ss_pred HHHHH T ss_conf 99999 No 15 >d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=27.40 E-value=15 Score=15.22 Aligned_cols=65 Identities=18% Similarity=0.216 Sum_probs=31.9 Q ss_pred HEEEEECC-CHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCHHHHHH Q ss_conf 00001078-678999999977765---421134567777511386310134420685677898678999899999 Q 537021.9.peg.8 112 AHKIIILP-ERSALKERIRRRFTQ---MLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEINYDETLQ 182 (217) Q Consensus 112 ~~~i~l~~-~r~~L~~rI~~R~~~---Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~~~yL~g~~~~~e~~e 182 (217) +..+-+.+ +.+.+.+++...+++ -++...++++-..- +.+ +.++|.+=|+..-..+.++.+...+ T Consensus 176 ~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~~~l~~i~~~s----~GD--iR~ai~~L~~~~~~~~~i~~~~~~~ 244 (253) T d1sxja2 176 CLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTT----RGD--IRQVINLLSTISTTTKTINHENINE 244 (253) T ss_dssp SEEEECCCCCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHT----TTC--HHHHHHHHTHHHHHSSCCCTTHHHH T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC----CCC--HHHHHHHHHHHHHCCCCCCHHHHHH T ss_conf 36531145314678899999999809999999999999967----970--9999999999997599889999999 No 16 >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} Probab=27.07 E-value=18 Score=14.72 Aligned_cols=67 Identities=7% Similarity=0.121 Sum_probs=38.4 Q ss_pred HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH-HHHHCCCCCHHHHHHHHHHHH Q ss_conf 100001078678999999977765421134567777511386310134420685677-898678999899999999999 Q 537021.9.peg.8 111 SAHKIIILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDI-IALLKGEINYDETLQRGIIAT 188 (217) Q Consensus 111 ~~~~i~l~~~r~~L~~rI~~R~~~Ml~~GlieEv~~L~~~~~~~~~~~~~~IGYke~-~~yL~g~~~~~e~~e~~~~~T 188 (217) ++..+++.+|.+.+.+|+..|-.......+++-...-++. +. +.|. .-.+++.-+.|++++.+...- T Consensus 102 ~~~~v~l~~~~e~~~~Rl~~R~~~~~~~~~~~~~~~~~e~------~~-----~~e~~~~~id~~~~~e~v~~~i~~~l 169 (171) T d1knqa_ 102 NLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQE------PG-----ADETDVLVVDIDQPLEGVVASTIEVI 169 (171) T ss_dssp TEEEEEEECCHHHHHHHHHTSTTCCCCHHHHHHHHHHCCC------CC-----TTCTTEEEEECSSCHHHHHHHHHHHH T ss_pred CCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC------CC-----CCCCCEEEEECCCCHHHHHHHHHHHH T ss_conf 8359864588899999998574888667888756887507------77-----55489899949899999999999996 No 17 >d1gq6a_ c.42.1.1 (A:) Proclavaminate amidino hydrolase {Streptomyces clavuligerus [TaxId: 1901]} Probab=26.81 E-value=16 Score=15.02 Aligned_cols=27 Identities=15% Similarity=0.015 Sum_probs=19.4 Q ss_pred HHHHHHCCCCEEEECCCCHHHHHHHCC Q ss_conf 999996399408978932799999617 Q 537021.9.peg.8 5 KLQRYKKRFLPIIVGGTGLYFRALTGQ 31 (217) Q Consensus 5 ~~e~~~r~kiPIiVGGTglY~~all~g 31 (217) ..++++.|++||+.||.+--.-+.+.+ T Consensus 96 v~~~~~~~~~pi~LGGdHsis~~~~~a 122 (301) T d1gq6a_ 96 LSGLLKANAAFLMIGGDHSLTVAALRA 122 (301) T ss_dssp HHHHHHHSSEEEEEESCGGGHHHHHHH T ss_pred HHHHHHCCCCEEECCCCCCCCCCHHHH T ss_conf 999996699214315533445410344 No 18 >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Probab=25.96 E-value=11 Score=16.13 Aligned_cols=20 Identities=20% Similarity=0.433 Sum_probs=13.4 Q ss_pred HCCCCEEEECCCCHH----HHHHHC Q ss_conf 639940897893279----999961 Q 537021.9.peg.8 10 KKRFLPIIVGGTGLY----FRALTG 30 (217) Q Consensus 10 ~r~kiPIiVGGTglY----~~all~ 30 (217) +|.|| +|+||||+= +++|+. T Consensus 2 ~kkKI-LVtGatG~iG~~l~~~L~~ 25 (307) T d1qyca_ 2 SRSRI-LLIGATGYIGRHVAKASLD 25 (307) T ss_dssp CCCCE-EEESTTSTTHHHHHHHHHH T ss_pred CCCEE-EEECCCCHHHHHHHHHHHH T ss_conf 98989-9989986899999999997 No 19 >d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]} Probab=24.51 E-value=18 Score=14.79 Aligned_cols=10 Identities=20% Similarity=0.312 Sum_probs=3.8 Q ss_pred CCCEEEECCC Q ss_conf 9940897893 Q 537021.9.peg.8 12 RFLPIIVGGT 21 (217) Q Consensus 12 ~kiPIiVGGT 21 (217) |+-|.||+|| T Consensus 17 ~r~~~vv~~~ 26 (160) T d1xrsb1 17 GRKIVVVGAS 26 (160) T ss_dssp CSCEEEEEEE T ss_pred CCCCEEEEEE T ss_conf 9986799997 No 20 >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Probab=24.28 E-value=15 Score=15.15 Aligned_cols=20 Identities=20% Similarity=0.064 Sum_probs=13.9 Q ss_pred HCCCCEEEECCCCHHHHHHH Q ss_conf 63994089789327999996 Q 537021.9.peg.8 10 KKRFLPIIVGGTGLYFRALT 29 (217) Q Consensus 10 ~r~kiPIiVGGTglY~~all 29 (217) =+||--+|+|||||==..|+ T Consensus 6 ~~~KkILVTG~tGfIGs~lv 25 (356) T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLS 25 (356) T ss_dssp HTTCEEEEETTTSHHHHHHH T ss_pred HCCCEEEEECCCCHHHHHHH T ss_conf 18898999788877999999 No 21 >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Probab=23.24 E-value=12 Score=15.87 Aligned_cols=17 Identities=18% Similarity=0.241 Sum_probs=12.5 Q ss_pred CCEEEECCCCHHHHHHHC Q ss_conf 940897893279999961 Q 537021.9.peg.8 13 FLPIIVGGTGLYFRALTG 30 (217) Q Consensus 13 kiPIiVGGTglY~~all~ 30 (217) || +|+|||||==.+|+. T Consensus 4 KI-LITG~tGfIGs~lv~ 20 (346) T d1ek6a_ 4 KV-LVTGGAGYIGSHTVL 20 (346) T ss_dssp EE-EEETTTSHHHHHHHH T ss_pred EE-EEECCCCHHHHHHHH T ss_conf 29-997897389999999 No 22 >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Probab=21.70 E-value=15 Score=15.14 Aligned_cols=14 Identities=29% Similarity=0.598 Sum_probs=8.7 Q ss_pred EEECCCCHHHHHHH Q ss_conf 89789327999996 Q 537021.9.peg.8 16 IIVGGTGLYFRALT 29 (217) Q Consensus 16 IiVGGTglY~~all 29 (217) +|+|||||==.+|+ T Consensus 6 LVTGgtGfIGs~lv 19 (346) T d1oc2a_ 6 IVTGGAGFIGSNFV 19 (346) T ss_dssp EEETTTSHHHHHHH T ss_pred EEECCCCHHHHHHH T ss_conf 99188868999999 No 23 >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Probab=21.67 E-value=19 Score=14.61 Aligned_cols=20 Identities=15% Similarity=0.310 Sum_probs=14.6 Q ss_pred HCCCCEEEECCCCHHHHHHH Q ss_conf 63994089789327999996 Q 537021.9.peg.8 10 KKRFLPIIVGGTGLYFRALT 29 (217) Q Consensus 10 ~r~kiPIiVGGTglY~~all 29 (217) .+||.-+|+|||||==..|+ T Consensus 9 ~~gk~VlVTG~sGfIGs~l~ 28 (342) T d1y1pa1 9 PEGSLVLVTGANGFVASHVV 28 (342) T ss_dssp CTTCEEEEETTTSHHHHHHH T ss_pred CCCCEEEEECCCCHHHHHHH T ss_conf 99599999799889999999 No 24 >d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]} Probab=21.39 E-value=23 Score=14.02 Aligned_cols=25 Identities=8% Similarity=0.207 Sum_probs=15.2 Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCH Q ss_conf 2357015699999999985348874 Q 537021.9.peg.8 71 RQIHPSDGQRIARALEIKLVSGQSI 95 (217) Q Consensus 71 ~~i~~nd~~Ri~RaLEi~~~tGk~~ 95 (217) .-+.|.+..=+..++..+...+.|+ T Consensus 37 ~~v~p~s~~el~~~~~~a~~~~ip~ 61 (194) T d1hska1 37 FYITPTKNEEVQAVVKYAYQNEIPV 61 (194) T ss_dssp EEECCSSHHHHHHHHHHHHHTTCCE T ss_pred EEEECCCHHHHHHHHHHHHHCCCCE T ss_conf 9995199999999998756436536 No 25 >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=20.75 E-value=18 Score=14.65 Aligned_cols=18 Identities=17% Similarity=0.233 Sum_probs=12.0 Q ss_pred CCEEEECCCCHHHHHHHC Q ss_conf 940897893279999961 Q 537021.9.peg.8 13 FLPIIVGGTGLYFRALTG 30 (217) Q Consensus 13 kiPIiVGGTglY~~all~ 30 (217) |+-+|+|||||==..|+. T Consensus 2 K~ILVTGatGfIG~~lv~ 19 (347) T d1z45a2 2 KIVLVTGGAGYIGSHTVV 19 (347) T ss_dssp CEEEEETTTSHHHHHHHH T ss_pred CEEEEECCCCHHHHHHHH T ss_conf 899991887479999999 No 26 >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Probab=20.57 E-value=19 Score=14.55 Aligned_cols=14 Identities=29% Similarity=0.553 Sum_probs=11.8 Q ss_pred CCCCEEEECCCCHH Q ss_conf 39940897893279 Q 537021.9.peg.8 11 KRFLPIIVGGTGLY 24 (217) Q Consensus 11 r~kiPIiVGGTglY 24 (217) +||+.||+|||+== T Consensus 4 kGKvalITGas~GI 17 (248) T d2o23a1 4 KGLVAVITGGASGL 17 (248) T ss_dssp TTCEEEEETTTSHH T ss_pred CCCEEEEECCCCHH T ss_conf 99889991888789 Done!