PSIBLAST alignment of GI: peg_888 and protein with PDB id: 3d3q

>gi|194320048|pdb|3D3Q|A Chain A, Crystal Structure Of Trna Delta(2)-Isopentenylpyrophosphate Transferase (Se0981) From Staphylococcus Epidermidis. Northeast Structural Genomics Consortium Target Ser100 Length = 340
>gi|194320049|pdb|3D3Q|B Chain B, Crystal Structure Of Trna Delta(2)-Isopentenylpyrophosphate Transferase (Se0981) From Staphylococcus Epidermidis. Northeast Structural Genomics Consortium Target Ser100 Length = 340
 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 8/213 (3%)

Query: 2   LSKKL-QRYKKRFLPIIVGGTGLYFRALTGQLSI----MPEIPTAIREKIREKLKQYGSH 56
             K +    ++  +PII GGTGLY ++L    +     + E      +   ++L+   ++
Sbjct: 85  AEKYIKDITRRGKVPIIAGGTGLYIQSLLYNYAFEDESISEDKXKQVKLKLKELEHLNNN 144

Query: 57  ILHDELSSLDSIVARQIHPSDGQRIARALEIKLVSGQSIIEFWKQAPNPFIPLESAHKII 116
            LH+ L+S D   A+ IHP++ +R+ RA+E  L + + +    ++    F        I 
Sbjct: 145 KLHEYLASFDKESAKDIHPNNRKRVLRAIEYYLKTKKLLSS--RKKVQQFTENYDTLLIG 202

Query: 117 ILPERSALKERIRRRFTQMLESGAIDEIRSLMKMNLSLDLPIMKAIGVRDIIALLKGEIN 176
           I   R  L  RI +R    L  G  +E++ L++          +AIG ++++ ++KG I+
Sbjct: 203 IEXSRETLYLRINKRVDIXLGHGLFNEVQHLVEQGFEASQSX-QAIGYKELVPVIKGNIS 261

Query: 177 YDETLQRGIIATNKYAKRQKTWLCHQFQADWIR 209
            +  +++    + +YAKRQ TW  ++    W+ 
Sbjct: 262 XENAVEKLKQHSRQYAKRQLTWFKNKXNVHWLN 294